BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005893
(671 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 174/294 (59%), Gaps = 7/294 (2%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA-EFTNEVLLI 404
L L VA+ NFS+ N+LG+GGFG VYKG L+DG +AVKRL QG +F EV +I
Sbjct: 30 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMI 89
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
H+NL++L GFC+ E+LLVY +M N S+ + L + P + L W KR I G
Sbjct: 90 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 149
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
+G+ YLH+ +IIHRD+KA+N+LLD + + DFG+A++ + V A + GT G
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGTIG 208
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAW--HLWNE 581
++APEY G S K+DVF +GV+L+E+ITG+R F+ +R A +++ W L E
Sbjct: 209 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR--AFDLARLANDDDVMLLDWVKGLLKE 266
Query: 582 GNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETIT 635
L+D L +E + I + LLC Q +RP MS VV ML+G+ +
Sbjct: 267 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 172/294 (58%), Gaps = 7/294 (2%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA-EFTNEVLLI 404
L L VA+ NF + N+LG+GGFG VYKG L+DG +AVKRL QG +F EV +I
Sbjct: 22 LRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMI 81
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
H+NL++L GFC+ E+LLVY +M N S+ + L + P + L W KR I G
Sbjct: 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 141
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
+G+ YLH+ +IIHRD+KA+N+LLD + + DFG+A++ + V A + G G
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGXIG 200
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAW--HLWNE 581
++APEY G S K+DVF +GV+L+E+ITG+R F+ +R A +++ W L E
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR--AFDLARLANDDDVMLLDWVKGLLKE 258
Query: 582 GNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETIT 635
L+D L +E + I + LLC Q +RP MS VV ML+G+ +
Sbjct: 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 171/294 (58%), Gaps = 10/294 (3%)
Query: 340 QDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTN 399
+ + + L L+ AT+NF ++G G FG VYKGVL DG ++A+KR + S QG EF
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 400 EVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-LCWSKRINI 458
E+ + +H +LV L+GFC + +E +L+Y++M N +L L+ + + W +R+ I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE-GEVNTAR 517
G +G+ YLH + IIHRD+K+ N+LLD + PKI+DFG+++ G+E G+ +
Sbjct: 145 CIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXX 199
Query: 518 IV-GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAW 576
+V GT GY+ PEY ++G + KSDV+SFGV+L E++ R + QS NL +A
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWAV 257
Query: 577 HLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
N G ++DP L D P+ ++ + C+ + DRP+M V+ L+
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 170/294 (57%), Gaps = 10/294 (3%)
Query: 340 QDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTN 399
+ + + L L+ AT+NF ++G G FG VYKGVL DG ++A+KR + S QG EF
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 400 EVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-LCWSKRINI 458
E+ + +H +LV L+GFC + +E +L+Y++M N +L L+ + + W +R+ I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE-GEVNTAR 517
G +G+ YLH + IIHRD+K+ N+LLD + PKI+DFG+++ G+E + +
Sbjct: 145 CIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXX 199
Query: 518 IV-GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAW 576
+V GT GY+ PEY ++G + KSDV+SFGV+L E++ R + QS NL +A
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWAV 257
Query: 577 HLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
N G ++DP L D P+ ++ + C+ + DRP+M V+ L+
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 157/297 (52%), Gaps = 23/297 (7%)
Query: 349 LDVATSNFSD------SNMLGQGGFGPVYKGVLSDGKEIAVKRLSS----CSEQGNAEFT 398
L T+NF + N +G+GGFG VYKG +++ +AVK+L++ +E+ +F
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFD 78
Query: 399 NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINI 458
E+ ++ K QH+NLV+LLGF DGD+ LVY +MPN SL L L W R I
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
G GI +LHE+ IHRD+K++N+LLD KISDFG+AR V +RI
Sbjct: 139 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRI 195
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLL--AYAW 576
VGT YMAPE A+ G + KSD++SFGV+L+EIITG ++ R P LL
Sbjct: 196 VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL--PAVDEHR---EPQLLLDIKEE 249
Query: 577 HLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGET 633
E D ID + D S Y + C+ E RP + V +LQ T
Sbjct: 250 IEDEEKTIEDYIDKKMNDADSTSVEAMY-SVASQCLHEKKNKRPDIKKVQQLLQEMT 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 156/297 (52%), Gaps = 23/297 (7%)
Query: 349 LDVATSNFSD------SNMLGQGGFGPVYKGVLSDGKEIAVKRLSS----CSEQGNAEFT 398
L T+NF + N +G+GGFG VYKG +++ +AVK+L++ +E+ +F
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFD 78
Query: 399 NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINI 458
E+ ++ K QH+NLV+LLGF DGD+ LVY +MPN SL L L W R I
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
G GI +LHE+ IHRD+K++N+LLD KISDFG+AR V RI
Sbjct: 139 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRI 195
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLL--AYAW 576
VGT YMAPE A+ G + KSD++SFGV+L+EIITG ++ R P LL
Sbjct: 196 VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL--PAVDEHR---EPQLLLDIKEE 249
Query: 577 HLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGET 633
E D ID + D S Y + C+ E RP + V +LQ T
Sbjct: 250 IEDEEKTIEDYIDKKMNDADSTSVEAMY-SVASQCLHEKKNKRPDIKKVQQLLQEMT 305
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 155/293 (52%), Gaps = 23/293 (7%)
Query: 353 TSNFSD------SNMLGQGGFGPVYKGVLSDGKEIAVKRLSS----CSEQGNAEFTNEVL 402
T+NF + N +G+GGFG VYKG +++ +AVK+L++ +E+ +F E+
Sbjct: 18 TNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIK 76
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
++ K QH+NLV+LLGF DGD+ LVY +MPN SL L L W R I G
Sbjct: 77 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGA 136
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
GI +LHE+ IHRD+K++N+LLD KISDFG+AR V RIVGT
Sbjct: 137 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTT 193
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLL--AYAWHLWN 580
YMAPE A+ G + KSD++SFGV+L+EIITG ++ R P LL
Sbjct: 194 AYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL--PAVDEHR---EPQLLLDIKEEIEDE 247
Query: 581 EGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGET 633
E D ID + D S Y + C+ E RP + V +LQ T
Sbjct: 248 EKTIEDYIDKKMNDADSTSVEAMY-SVASQCLHEKKNKRPDIKKVQQLLQEMT 299
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 153/299 (51%), Gaps = 23/299 (7%)
Query: 349 LDVATSNFSD------SNMLGQGGFGPVYKGVLSDGKEIAVKRLSS----CSEQGNAEFT 398
L T+NF + N G+GGFG VYKG +++ +AVK+L++ +E+ +F
Sbjct: 11 LKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFD 69
Query: 399 NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINI 458
E+ + K QH+NLV+LLGF DGD+ LVY + PN SL L L W R I
Sbjct: 70 QEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKI 129
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
G GI +LHE+ IHRD+K++N+LLD KISDFG+AR V +RI
Sbjct: 130 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRI 186
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLL--AYAW 576
VGT Y APE A+ G + KSD++SFGV+L+EIITG ++ R P LL
Sbjct: 187 VGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGL--PAVDEHR---EPQLLLDIKEE 240
Query: 577 HLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETIT 635
E D ID D S Y + C+ E RP + V +LQ T +
Sbjct: 241 IEDEEKTIEDYIDKKXNDADSTSVEAXY-SVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 86
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 142
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 200 DVWSFGILLTEIVT----HGRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 245
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 246 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 192 DVWSFGILLTEIVT----HGRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 237
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 238 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 84
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 140
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 198 DVWSFGILLTEIVTH----GRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 243
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 244 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 79
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 80 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 135
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 193 DVWSFGILLTEIVTH----GRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 238
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 239 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 80
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 81 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 136
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 194 DVWSFGILLTEIVTH----GRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 239
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 240 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 84
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 140
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 198 DVWSFGILLTEIVTH----GRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 243
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 244 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 271
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 192 DVWSFGILLTEIVTH----GRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 237
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 238 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 265
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 83
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 84 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 139
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 197 DVWSFGILLTEIVTH----GRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 242
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 243 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 87
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 143
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T R G T P ++ N ++ P D C P+
Sbjct: 201 DVWSFGILLTEIVTHGRIP----YPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 246
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 247 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 274
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 88
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 144
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T R G T P ++ N ++ P D C P+
Sbjct: 202 DVWSFGILLTEIVTHGRIP----YPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 247
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 248 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 275
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 192 DVWSFGILLTEIVTH----GRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 237
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 238 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 73
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 74 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 129
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 187 DVWSFGILLTEIVTH----GRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 232
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 233 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 260
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 138/271 (50%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G G V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAE---XTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 192 DVWSFGILLTEIVT----HGRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 237
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 238 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 265
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 139/271 (51%), Gaps = 28/271 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++AVK L S +A F E L+ +LQH+ LV+L V
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 74
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ ++ E+M N SL L P L +K +++ I +G+ ++ E + IHR+
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRN 130
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKS 539
L+A+N+L+ ++ KI+DFG+AR+ +E TAR + + APE G ++IKS
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFG+LL EI+T G G T P ++ N ++ P D C P+
Sbjct: 188 DVWSFGILLTEIVT----HGRIPYPGMTNPEVIQ------NLERGYRMVRP---DNC-PE 233
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
E + + LC +E DRPT + +L+
Sbjct: 234 ELYQLMR---LCWKERPEDRPTFDYLRSVLE 261
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 43/263 (16%)
Query: 320 ASKTGLRYQHVRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGV---LS 376
A +G+ QH++ RD LK + LG+G FG V+ LS
Sbjct: 2 AMHSGIHVQHIKRRDIVLKRE---------------------LGEGAFGKVFLAECYNLS 40
Query: 377 DGKE---IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMP 433
K+ +AVK L + +F E L+ LQH+++VK G C DGD ++V+E+M
Sbjct: 41 PTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMK 100
Query: 434 NSSLDA----------ILFD--PRK-RGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+ L+ IL D PR+ +G L S+ ++I + I G++YL + +HR
Sbjct: 101 HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHR 157
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSD 540
DL N L+ ++ KI DFGM+R ++ + +M PE M ++ +SD
Sbjct: 158 DLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD 217
Query: 541 VFSFGVLLIEIITGRRNTGFNQS 563
V+SFGV+L EI T + F S
Sbjct: 218 VWSFGVILWEIFTYGKQPWFQLS 240
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 109/220 (49%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I KL H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMAR I+ S
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRK 202
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 203 GGCAMLPV-KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 38/290 (13%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAE----FTNEVLLI 404
L++ + + ++G GGFG VY+ G E+AVK ++ ++ E L
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+H N++ L G C+ LV EF L+ +L R + +N I +
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL----VNWAVQIAR 116
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNP--------KISDFGMARIFAGSEGEVNTA 516
G+ YLH+++ + IIHRDLK+SN+L+ + KI+DFG+AR +
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH----RTTKM 172
Query: 517 RIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAW 576
G Y +MAPE ++S SDV+S+GVLL E++TG F G LA A+
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG--EVPFRGIDG------LAVAY 224
Query: 577 HLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVV 626
G A++ + + TC P+ F + + C D RP+ ++++
Sbjct: 225 -----GVAMNKLALPIPSTC-PEPFAKLMED---CWNPDPHSRPSFTNIL 265
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLSDGKE-----IAVKRLSSCS-EQGNAEFTNEVLLILKL 407
+ +LG G FG VYKG+ E +A+K L+ + + N EF +E L++ +
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
H +LV+LLG C+ +L V + MP+ L + + + + LL W +I
Sbjct: 98 DHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------A 150
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG++YL E R++HRDL A NVL+ + KI+DFG+AR+ G E E N
Sbjct: 151 KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 207
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E ++ +SDV+S+GV + E++T
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 20/213 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVLSDGKE-----IAVKRLSSCS-EQGNAEFTNEVLLI 404
+ + +LG G FG VYKG+ E +A+K L+ + + N EF +E L++
Sbjct: 12 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVN 460
+ H +LV+LLG C+ +L V + MP+ L + + + + LL W +I
Sbjct: 72 ASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI---- 126
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
KG++YL E R++HRDL A NVL+ + KI+DFG+AR+ G E E N
Sbjct: 127 --AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 181
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E ++ +SDV+S+GV + E++T
Sbjct: 182 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 109/220 (49%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I KL H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMAR I+ S
Sbjct: 161 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRK 216
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 217 GGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 133/289 (46%), Gaps = 47/289 (16%)
Query: 345 DLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLI 404
D + ++ + LG G FG V+ G ++ ++AVK L + A F E L+
Sbjct: 4 DKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLM 62
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIV 463
LQH LV+L + ++ E+M SL D + D + LL K I+ I
Sbjct: 63 KTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIA 120
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY- 522
+G+ Y+ R IHRDL+A+NVL+ + KI+DFG+AR+ +E TAR +
Sbjct: 121 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFP 174
Query: 523 -GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT-------GRRNTGFNQ--SRGATAPNLL 572
+ APE G ++IKSDV+SFG+LL EI+T GR N S+G P +
Sbjct: 175 IKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRV- 233
Query: 573 AYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPT 621
+ C PDE I +C +E A +RPT
Sbjct: 234 ---------------------ENC-PDELY---DIMKMCWKEKAEERPT 257
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 138/282 (48%), Gaps = 31/282 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G + ++A+K L + + F E ++ KL+H LV+L + V
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQL--YAVV 73
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L D R L +++ + G+ Y+ R+ IHR
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRALKL-PNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+++N+L+ + KI+DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNE---XTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 539 SDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSP 598
SDV+SFG+LL E++T R P + N L+ ++ C
Sbjct: 187 SDVWSFGILLTELVTKGR---------VPYPGM--------NNREVLEQVERGYRMPCPQ 229
Query: 599 DEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETITLCQPQ 640
D + + + C ++D +RPT + L+ + T +PQ
Sbjct: 230 DCPISLHELMIHCWKKDPEERPTFEYLQSFLE-DYFTATEPQ 270
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 8/219 (3%)
Query: 344 IDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSS---CSEQGNAEFTNE 400
+D + +D+ + + +G G FG V++ G ++AVK L +E+ N EF E
Sbjct: 27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVN-EFLRE 84
Query: 401 VLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVN 460
V ++ +L+H N+V +G +V E++ SL +L R L +R+++
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY 144
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+ KG+ YLH + I+HRDLK+ N+L+D K+ DFG++R+ A + + G
Sbjct: 145 DVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASX--FLXSKXAAG 201
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTG 559
T +MAPE + + KSDV+SFGV+L E+ T ++ G
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 128/272 (47%), Gaps = 47/272 (17%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V+ G ++ ++AVK L + A F E L+ LQH LV+L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 422 GDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+ ++ EFM SL D + D + LL K I+ I +G+ Y+ R IHR
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE---RKNYIHR 133
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+NVL+ + KI+DFG+AR+ +E TAR + + APE G ++IK
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 539 SDVFSFGVLLIEIIT-------GRRNTGFNQ--SRGATAPNLLAYAWHLWNEGNALDLID 589
S+V+SFG+LL EI+T GR N S+G P +
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRM------------------ 232
Query: 590 PLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPT 621
+ C PDE I +C +E A +RPT
Sbjct: 233 ----ENC-PDELY---DIMKMCWKEKAEERPT 256
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 8/219 (3%)
Query: 344 IDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSS---CSEQGNAEFTNE 400
+D + +D+ + + +G G FG V++ G ++AVK L +E+ N EF E
Sbjct: 27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVN-EFLRE 84
Query: 401 VLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVN 460
V ++ +L+H N+V +G +V E++ SL +L R L +R+++
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY 144
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+ KG+ YLH + I+HR+LK+ N+L+D K+ DFG++R+ A + +A G
Sbjct: 145 DVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA--AG 201
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTG 559
T +MAPE + + KSDV+SFGV+L E+ T ++ G
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMAR I+ S
Sbjct: 173 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRK 228
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 229 GGCAMLPV-KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMAR I+ S
Sbjct: 146 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRK 201
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 202 GGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMAR I+ S
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRK 202
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 203 GGCAMLPV-KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMAR I+ S
Sbjct: 153 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRK 208
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 209 GGCAMLPV-KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMAR I+ S
Sbjct: 163 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRK 218
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 219 GGCAMLPV-KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMAR I+ S
Sbjct: 161 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRK 216
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 217 GGCAMLPV-KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMAR I+ S
Sbjct: 146 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRK 201
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 202 GGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMAR I+ S
Sbjct: 138 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRK 193
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 194 GGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 331
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 387
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 445 SDVWSFGILLTELTTKGR 462
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 108/221 (48%), Gaps = 23/221 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMARIF--AGSEGE 512
I G YL E+ IHRD+ A N LL P KI DFGMAR AG +
Sbjct: 187 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGYYRK 242
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
A + +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 243 GGCAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 108/221 (48%), Gaps = 23/221 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMARIF--AGSEGE 512
I G YL E+ IHRD+ A N LL P KI DFGMAR AG +
Sbjct: 164 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGYYRK 219
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
A + +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 220 GGCAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 35/308 (11%)
Query: 339 AQDFYIDLETLDVATSNFSDSNMLGQGGFGPVY----KGVLSDGKE--IAVKRLS-SCSE 391
A D Y+ E +VA + S LGQG FG VY KGV+ D E +A+K ++ + S
Sbjct: 5 AADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 63
Query: 392 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR---- 447
+ EF NE ++ + ++V+LLG G L++ E M L + L R
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 448 ---GLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR 504
SK I + I G+ YL+ + + +HRDL A N ++ D KI DFGM R
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 505 IFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
++ + + +M+PE +G+++ SDV+SFGV+L EI T +
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQ 236
Query: 565 GATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSS 624
G + +L + EG LD D C PD + +C Q + RP+
Sbjct: 237 GLSNEQVLRFV----MEGGLLD-----KPDNC-PDMLFELMR---MCWQYNPKMRPSFLE 283
Query: 625 VVVMLQGE 632
++ ++ E
Sbjct: 284 IISSIKEE 291
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 72
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 128
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNE---XTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 186 SDVWSFGILLTELTTKGR 203
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---XTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 136/297 (45%), Gaps = 34/297 (11%)
Query: 350 DVATSNFSDSNMLGQGGFGPVY----KGVLSDGKE--IAVKRLS-SCSEQGNAEFTNEVL 402
+VA + S LGQG FG VY KGV+ D E +A+K ++ + S + EF NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-------GLLCWSKR 455
++ + ++V+LLG G L++ E M L + L R SK
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
I + I G+ YL+ + + +HRDL A N ++ D KI DFGM R ++
Sbjct: 126 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 182
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYA 575
+ + +M+PE +G+++ SDV+SFGV+L EI T +G + +L +
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRFV 238
Query: 576 WHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGE 632
EG LD D C PD L + +C Q + RP+ ++ ++ E
Sbjct: 239 ----MEGGLLD-----KPDNC-PDMLLELMR---MCWQYNPKMRPSFLEIISSIKEE 282
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 75
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 131
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 189 SDVWSFGILLTELTTKGR 206
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 31/282 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 249
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+ R+ +E TAR + + APE A+ G ++IK
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 539 SDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSP 598
SDV+SFG+LL E+ T R P ++ LD ++ C P
Sbjct: 363 SDVWSFGILLTELTTKGR---------VPYPGMV--------NREVLDQVERGYRMPCPP 405
Query: 599 DEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETITLCQPQ 640
+ + C ++D +RPT + L+ + T +PQ
Sbjct: 406 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE-DYFTSTEPQ 446
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 71
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 185 SDVWSFGILLTELTTKGR 202
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 73
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 187 SDVWSFGILLTELTTKGR 204
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSS-CSEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L CSEQ +F E L
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMA+ I+ S
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAQDIYRASYYRK 202
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 203 GGCAMLPV-KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRL-PQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEW---TARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 193 SDVWSFGILLTELTTKGR 210
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 148/333 (44%), Gaps = 35/333 (10%)
Query: 314 LHKIGDASKTGLRYQHVRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVY-- 371
H+ + S+ G + + A D Y+ E +VA + S LGQG FG VY
Sbjct: 8 FHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDE-WEVAREKITMSRELGQGSFGMVYEG 66
Query: 372 --KGVLSDGKE--IAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKL 426
KGV+ D E +A+K ++ + S + EF NE ++ + ++V+LLG G L
Sbjct: 67 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 126
Query: 427 LVYEFMPNSSLDAILFDPRKR-------GLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
++ E M L + L R SK I + I G+ YL+ + + +H
Sbjct: 127 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVH 183
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKS 539
RDL A N ++ D KI DFGM R ++ + + +M+PE +G+++ S
Sbjct: 184 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 243
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFGV+L EI T +G + +L + EG LD D C PD
Sbjct: 244 DVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRFVM----EGGLLD-----KPDNC-PD 289
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGE 632
+ +C Q + RP+ ++ ++ E
Sbjct: 290 MLFELMR---MCWQYNPKMRPSFLEIISSIKEE 319
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ K++H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQL--YAVV 82
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRL-PQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 193 SDVWSFGILLTELTTKGR 210
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 141/310 (45%), Gaps = 35/310 (11%)
Query: 337 LKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVY----KGVLSDGKE--IAVKRLS-SC 389
+ A D Y+ E +VA + S LGQG FG VY KGV+ D E +A+K ++ +
Sbjct: 2 VSAADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 390 SEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-- 447
S + EF NE ++ + ++V+LLG G L++ E M L + L R
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 448 -----GLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGM 502
SK I + I G+ YL+ + + +HRDL A N ++ D KI DFGM
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 503 ARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQ 562
R ++ + + +M+PE +G+++ SDV+SFGV+L EI T
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQP 233
Query: 563 SRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTM 622
+G + +L + EG LD D C PD + +C Q + RP+
Sbjct: 234 YQGLSNEQVLRFV----MEGGLLD-----KPDNC-PDMLFELMR---MCWQYNPKMRPSF 280
Query: 623 SSVVVMLQGE 632
++ ++ E
Sbjct: 281 LEIISSIKEE 290
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 18/234 (7%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH 409
++ + +G G FG VYKG + + +++ + Q F NEV ++ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N++ +G+ + +V ++ SSL L + + K I+I +G+ YL
Sbjct: 64 VNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H S IIHRDLK++N+ L D+ KI DFG+A + + G ++ G+ +MAPE
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 530 AM---EGLYSIKSDVFSFGVLLIEIITG---------RRNTGFNQSRGATAPNL 571
+ YS +SDV++FG++L E++TG R F RG +P+L
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 141/310 (45%), Gaps = 35/310 (11%)
Query: 337 LKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVY----KGVLSDGKE--IAVKRLS-SC 389
+ A D Y+ E +VA + S LGQG FG VY KGV+ D E +A+K ++ +
Sbjct: 2 VSAADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 390 SEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-- 447
S + EF NE ++ + ++V+LLG G L++ E M L + L R
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 448 -----GLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGM 502
SK I + I G+ YL+ + + +HRDL A N ++ D KI DFGM
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 503 ARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQ 562
R ++ + + +M+PE +G+++ SDV+SFGV+L EI T
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQP 233
Query: 563 SRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTM 622
+G + +L + EG LD D C PD + +C Q + RP+
Sbjct: 234 YQGLSNEQVLRFV----MEGGLLD-----KPDNC-PDMLFELMR---MCWQYNPKMRPSF 280
Query: 623 SSVVVMLQGE 632
++ ++ E
Sbjct: 281 LEIISSIKEE 290
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 110/198 (55%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M SL L + L + +++ I G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 18/234 (7%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH 409
++ + +G G FG VYKG + + +++ + Q F NEV ++ K +H
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N++ +G+ + +V ++ SSL L + + K I+I +G+ YL
Sbjct: 69 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL 125
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H S IIHRDLK++N+ L D+ KI DFG+A + + G ++ G+ +MAPE
Sbjct: 126 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 530 AM---EGLYSIKSDVFSFGVLLIEIITG---------RRNTGFNQSRGATAPNL 571
+ YS +SDV++FG++L E++TG R F RG +P+L
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 236
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 35/308 (11%)
Query: 339 AQDFYIDLETLDVATSNFSDSNMLGQGGFGPVY----KGVLSDGKE--IAVKRLS-SCSE 391
A D Y+ E +VA + S LGQG FG VY KGV+ D E +A+K ++ + S
Sbjct: 11 AADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 69
Query: 392 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR---- 447
+ EF NE ++ + ++V+LLG G L++ E M L + L R
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 129
Query: 448 ---GLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR 504
SK I + I G+ YL+ + + +HRDL A N ++ D KI DFGM R
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 505 IFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
++ + + +M+PE +G+++ SDV+SFGV+L EI T +
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQ 242
Query: 565 GATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSS 624
G + +L + EG LD D C PD + +C Q + RP+
Sbjct: 243 GLSNEQVLRFV----MEGGLLD-----KPDNC-PDMLFELMR---MCWQYNPKMRPSFLE 289
Query: 625 VVVMLQGE 632
++ ++ E
Sbjct: 290 IISSIKEE 297
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 18/234 (7%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH 409
++ + +G G FG VYKG + + +++ + Q F NEV ++ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N++ +G+ + +V ++ SSL L + + K I+I +G+ YL
Sbjct: 64 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H S IIHRDLK++N+ L D+ KI DFG+A + + G ++ G+ +MAPE
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 530 AM---EGLYSIKSDVFSFGVLLIEIITG---------RRNTGFNQSRGATAPNL 571
+ YS +SDV++FG++L E++TG R F RG +P+L
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 35/308 (11%)
Query: 339 AQDFYIDLETLDVATSNFSDSNMLGQGGFGPVY----KGVLSDGKE--IAVKRLS-SCSE 391
A D Y+ E +VA + S LGQG FG VY KGV+ D E +A+K ++ + S
Sbjct: 5 AADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 63
Query: 392 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR---- 447
+ EF NE ++ + ++V+LLG G L++ E M L + L R
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 448 ---GLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR 504
SK I + I G+ YL+ + + +HRDL A N ++ D KI DFGM R
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 505 IFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
++ + + +M+PE +G+++ SDV+SFGV+L EI T +
Sbjct: 181 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQ 236
Query: 565 GATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSS 624
G + +L + EG LD D C PD + +C Q + RP+
Sbjct: 237 GLSNEQVLRFV----MEGGLLD-----KPDNC-PDMLFELMR---MCWQYNPKMRPSFLE 283
Query: 625 VVVMLQGE 632
++ ++ E
Sbjct: 284 IISSIKEE 291
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 18/234 (7%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH 409
++ + +G G FG VYKG + + +++ + Q F NEV ++ K +H
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N++ +G+ + +V ++ SSL L + + K I+I +G+ YL
Sbjct: 69 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL 125
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H S IIHRDLK++N+ L D+ KI DFG+A + + G ++ G+ +MAPE
Sbjct: 126 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 530 AM---EGLYSIKSDVFSFGVLLIEIITG---------RRNTGFNQSRGATAPNL 571
+ YS +SDV++FG++L E++TG R F RG +P+L
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 236
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 18/234 (7%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH 409
++ + +G G FG VYKG + + +++ + Q F NEV ++ K +H
Sbjct: 6 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N++ +G+ + +V ++ SSL L + + K I+I +G+ YL
Sbjct: 66 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL 122
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H S IIHRDLK++N+ L D+ KI DFG+A + + G ++ G+ +MAPE
Sbjct: 123 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 179
Query: 530 AM---EGLYSIKSDVFSFGVLLIEIITG---------RRNTGFNQSRGATAPNL 571
+ YS +SDV++FG++L E++TG R F RG +P+L
Sbjct: 180 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 233
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 21/253 (8%)
Query: 331 RGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCS 390
R R L +D D E D + +G G FG VYKG + + +++ +
Sbjct: 15 RNRMKTLGRRDSSDDWEIPD---GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT 71
Query: 391 EQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLL 450
Q F NEV ++ K +H N++ +G+ + +V ++ SSL L + +
Sbjct: 72 PQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEM 130
Query: 451 CWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE 510
K I+I +G+ YLH S IIHRDLK++N+ L D+ KI DFG+A + +
Sbjct: 131 I--KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 185
Query: 511 GEVNTARIVGTYGYMAPEYAM---EGLYSIKSDVFSFGVLLIEIITG---------RRNT 558
G ++ G+ +MAPE + YS +SDV++FG++L E++TG R
Sbjct: 186 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
Query: 559 GFNQSRGATAPNL 571
F RG +P+L
Sbjct: 246 IFMVGRGYLSPDL 258
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 21/253 (8%)
Query: 331 RGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCS 390
R R L +D D E D + +G G FG VYKG + + +++ +
Sbjct: 16 RNRMKTLGRRDSSDDWEIPD---GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT 72
Query: 391 EQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLL 450
Q F NEV ++ K +H N++ +G+ + +V ++ SSL L + +
Sbjct: 73 PQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEM 131
Query: 451 CWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE 510
K I+I +G+ YLH S IIHRDLK++N+ L D+ KI DFG+A + +
Sbjct: 132 I--KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 186
Query: 511 GEVNTARIVGTYGYMAPEYAM---EGLYSIKSDVFSFGVLLIEIITG---------RRNT 558
G ++ G+ +MAPE + YS +SDV++FG++L E++TG R
Sbjct: 187 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
Query: 559 GFNQSRGATAPNL 571
F RG +P+L
Sbjct: 247 IFMVGRGYLSPDL 259
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVL------SDGKEIAVKRLSSCSEQGNAEFTNEVLLI 404
+ N LG+G FG V+ D +AVK L S+ +F E L+
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL---------DAILF-DPRKRGLLCWSK 454
LQH+++VK G CV+GD ++V+E+M + L DA+L + L S+
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 455 RINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN 514
++I I G++YL + +HRDL N L+ ++ KI DFGM+R ++
Sbjct: 130 MLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 515 TARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +M PE M ++ +SDV+S GV+L EI T
Sbjct: 187 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 110/198 (55%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M L L + L + +++ I G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 35/308 (11%)
Query: 339 AQDFYIDLETLDVATSNFSDSNMLGQGGFGPVY----KGVLSDGKE--IAVKRLS-SCSE 391
A D Y+ E +VA + S LGQG FG VY KGV+ D E +A+K ++ + S
Sbjct: 11 AADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 69
Query: 392 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR---- 447
+ EF NE ++ + ++V+LLG G L++ E M L + L R
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 129
Query: 448 ---GLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR 504
SK I + I G+ YL+ + + +HRDL A N ++ D KI DFGM R
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 505 IFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
++ + + +M+PE +G+++ SDV+SFGV+L EI T +
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQ 242
Query: 565 GATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSS 624
G + +L + EG LD D C PD + +C Q + RP+
Sbjct: 243 GLSNEQVLRFV----MEGGLLD-----KPDNC-PDMLFELMR---MCWQYNPKMRPSFLE 289
Query: 625 VVVMLQGE 632
++ ++ E
Sbjct: 290 IISSIKEE 297
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 325 LRYQHVRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVL--SDGKE-- 380
L +Q G D + F T ++ S + ++G G FG VYKG+L S GK+
Sbjct: 20 LYFQGAMGSDPNQAVLKF-----TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEV 74
Query: 381 -IAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLD 438
+A+K L + +E+ +F E ++ + H N+++L G +++ E+M N +LD
Sbjct: 75 PVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD 134
Query: 439 AILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKIS 498
L + K G + + ++ GI G+ YL + + +HRDL A N+L++ ++ K+S
Sbjct: 135 KFLRE--KDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVS 189
Query: 499 DFGMARIFA-GSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
DFG++R+ E T+ + APE ++ SDV+SFG+++ E++T
Sbjct: 190 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 35/308 (11%)
Query: 339 AQDFYIDLETLDVATSNFSDSNMLGQGGFGPVY----KGVLSDGKE--IAVKRLS-SCSE 391
A D Y+ E +VA + S LGQG FG VY KGV+ D E +A+K ++ + S
Sbjct: 1 AADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 59
Query: 392 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR---- 447
+ EF NE ++ + ++V+LLG G L++ E M L + L R
Sbjct: 60 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 119
Query: 448 ---GLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR 504
SK I + I G+ YL+ + + +HRDL A N ++ D KI DFGM R
Sbjct: 120 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
Query: 505 IFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
++ + + +M+PE +G+++ SDV+SFGV+L EI T +
Sbjct: 177 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQ 232
Query: 565 GATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSS 624
G + +L + EG LD D C PD + +C Q + RP+
Sbjct: 233 GLSNEQVLRFV----MEGGLLD-----KPDNC-PDMLFELMR---MCWQYNPKMRPSFLE 279
Query: 625 VVVMLQGE 632
++ ++ E
Sbjct: 280 IISSIKEE 287
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 110/198 (55%), Gaps = 13/198 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LGQG FG V+ G + +A+K L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
+E + +V E+M L L + L + +++ I G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIK 538
DL+A+N+L+ ++ K++DFG+AR+ +E TAR + + APE A+ G ++IK
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 539 SDVFSFGVLLIEIITGRR 556
SDV+SFG+LL E+ T R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 107/220 (48%), Gaps = 21/220 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSSC-SEQGNAEFTNEVL 402
+V N + LG G FG VY+G +S ++AVK L SEQ +F E L
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR----GLLCWSKRINI 458
+I K H+N+V+ +G + + ++ E M L + L + R R L +++
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP----KISDFGMAR-IFAGSEGEV 513
I G YL E+ IHRD+ A N LL P KI DFGMAR I+ S
Sbjct: 161 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRK 216
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ +M PE MEG+++ K+D +SFGVLL EI +
Sbjct: 217 GGCAMLPV-KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 362 LGQGGFGPVYKGVL------SDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G FG V+ D +AVK L SE +F E L+ LQH+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 416 LGFCVDGDEKLLVYEFMPNSSLDAIL--FDPRKR----------GLLCWSKRINIVNGIV 463
G C +G L+V+E+M + L+ L P + G L + + + + +
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
G++YL + L +HRDL N L+ + KI DFGM+R ++ R +
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+M PE + ++ +SDV+SFGV+L EI T
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 419
+G G FG V+ G + ++A+K R + SE+ +F E +++KL H LV+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
++ LV+EFM + L L +RGL + + + +G+ YL E S +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIH 126
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKS 539
RDL A N L+ + K+SDFGM R + +T + +PE YS KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKS 185
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFGVL+ E+ + + N+S ++ L P L T
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI----------STGFRLYKPRLAST---- 231
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
I C +E DRP S ++ L
Sbjct: 232 ---HVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 362 LGQGGFGPVYKGVL------SDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G FG V+ D +AVK L SE +F E L+ LQH+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 416 LGFCVDGDEKLLVYEFMPNSSLDAIL--FDPRKR----------GLLCWSKRINIVNGIV 463
G C +G L+V+E+M + L+ L P + G L + + + + +
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
G++YL + L +HRDL N L+ + KI DFGM+R ++ R +
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+M PE + ++ +SDV+SFGV+L EI T
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 35/308 (11%)
Query: 339 AQDFYIDLETLDVATSNFSDSNMLGQGGFGPVY----KGVLSDGKE--IAVKRLS-SCSE 391
A D ++ E +VA + S LGQG FG VY KGV+ D E +A+K ++ + S
Sbjct: 2 AADVFVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 60
Query: 392 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR---- 447
+ EF NE ++ + ++V+LLG G L++ E M L + L R
Sbjct: 61 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 120
Query: 448 ---GLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR 504
SK I + I G+ YL+ + + +HRDL A N ++ D KI DFGM R
Sbjct: 121 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
Query: 505 IFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
++ + + +M+PE +G+++ SDV+SFGV+L EI T +
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQ 233
Query: 565 GATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSS 624
G + +L + EG LD D C PD + +C Q + RP+
Sbjct: 234 GLSNEQVLRFV----MEGGLLD-----KPDNC-PDMLFELMR---MCWQYNPKMRPSFLE 280
Query: 625 VVVMLQGE 632
++ ++ E
Sbjct: 281 IISSIKEE 288
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 362 LGQGGFGPVYKGVL------SDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G FG V+ D +AVK L SE +F E L+ LQH+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 416 LGFCVDGDEKLLVYEFMPNSSLDAIL--FDPRKR----------GLLCWSKRINIVNGIV 463
G C +G L+V+E+M + L+ L P + G L + + + + +
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
G++YL + L +HRDL N L+ + KI DFGM+R ++ R +
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+M PE + ++ +SDV+SFGV+L EI T
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 135/297 (45%), Gaps = 34/297 (11%)
Query: 350 DVATSNFSDSNMLGQGGFGPVY----KGVLSDGKE--IAVKRLS-SCSEQGNAEFTNEVL 402
+VA + S LGQG FG VY KGV+ D E +A+K ++ + S + EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-------GLLCWSKR 455
++ + ++V+LLG G L++ E M L + L R SK
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
I + I G+ YL+ + + +HRDL A N + D KI DFGM R ++
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYA 575
+ + +M+PE +G+++ SDV+SFGV+L EI T +G + +L +
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRFV 240
Query: 576 WHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGE 632
EG LD D C PD L + +C Q + RP+ ++ ++ E
Sbjct: 241 ----MEGGLLD-----KPDNC-PDMLLELMR---MCWQYNPKMRPSFLEIISSIKEE 284
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 9/197 (4%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
+G G FG VYKG + + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ +V ++ SSL L + + K I+I +G+ YLH S IIHRD
Sbjct: 80 -PQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHRD 133
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAM---EGLYSIK 538
LK++N+ L D KI DFG+A + + G ++ G+ +MAPE YS +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 539 SDVFSFGVLLIEIITGR 555
SDV++FG++L E++TG+
Sbjct: 194 SDVYAFGIVLYELMTGQ 210
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 135/297 (45%), Gaps = 34/297 (11%)
Query: 350 DVATSNFSDSNMLGQGGFGPVY----KGVLSDGKE--IAVKRLS-SCSEQGNAEFTNEVL 402
+VA + S LGQG FG VY KGV+ D E +A+K ++ + S + EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-------GLLCWSKR 455
++ + ++V+LLG G L++ E M L + L R SK
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
I + I G+ YL+ + + +HRDL A N ++ D KI DFGM R ++
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYA 575
+ + +M+PE +G+++ SDV+SFGV+L EI T +G + +L +
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRFV 240
Query: 576 WHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGE 632
EG LD D C PD + +C Q + RP+ ++ ++ E
Sbjct: 241 ----MEGGLLD-----KPDNC-PDMLFELMR---MCWQYNPKMRPSFLEIISSIKEE 284
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 121/253 (47%), Gaps = 21/253 (8%)
Query: 331 RGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCS 390
R R L +D D E D + +G G FG VYKG + + +++ +
Sbjct: 8 RNRMKTLGRRDSSDDWEIPD---GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT 64
Query: 391 EQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLL 450
Q F NEV ++ K +H N++ +G+ + +V ++ SSL L + +
Sbjct: 65 PQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEM 123
Query: 451 CWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE 510
K I+I +G+ YLH S IIHRDLK++N+ L D+ KI DFG+A +
Sbjct: 124 I--KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS 178
Query: 511 GEVNTARIVGTYGYMAPEYAM---EGLYSIKSDVFSFGVLLIEIITG---------RRNT 558
G ++ G+ +MAPE + YS +SDV++FG++L E++TG R
Sbjct: 179 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
Query: 559 GFNQSRGATAPNL 571
F RG +P+L
Sbjct: 239 IFMVGRGYLSPDL 251
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 18/234 (7%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH 409
++ + +G G FG VYKG + + +++ + Q F NEV ++ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N++ +G+ + +V ++ SSL L + + K I+I +G+ YL
Sbjct: 64 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H S IIHRDLK++N+ L D+ KI DFG+A + G ++ G+ +MAPE
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 530 AM---EGLYSIKSDVFSFGVLLIEIITG---------RRNTGFNQSRGATAPNL 571
+ YS +SDV++FG++L E++TG R F RG +P+L
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 121/253 (47%), Gaps = 21/253 (8%)
Query: 331 RGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCS 390
R R L +D D E D + +G G FG VYKG + + +++ +
Sbjct: 16 RNRMKTLGRRDSSDDWEIPD---GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT 72
Query: 391 EQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLL 450
Q F NEV ++ K +H N++ +G+ + +V ++ SSL L + +
Sbjct: 73 PQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEM 131
Query: 451 CWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE 510
K I+I +G+ YLH S IIHRDLK++N+ L D+ KI DFG+A +
Sbjct: 132 I--KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS 186
Query: 511 GEVNTARIVGTYGYMAPEYAM---EGLYSIKSDVFSFGVLLIEIITG---------RRNT 558
G ++ G+ +MAPE + YS +SDV++FG++L E++TG R
Sbjct: 187 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
Query: 559 GFNQSRGATAPNL 571
F RG +P+L
Sbjct: 247 IFMVGRGYLSPDL 259
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 419
+G G FG V+ G + ++A+K R + SE+ +F E +++KL H LV+L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
++ LV+EFM + L L +RGL + + + +G+ YL E +IH
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKS 539
RDL A N L+ + K+SDFGM R + +T + +PE YS KS
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKS 188
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFGVL+ E+ + + N+S ++ L P L T
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI----------STGFRLYKPRLAST---- 234
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
I C +E DRP S ++ L
Sbjct: 235 ---HVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 419
+G G FG V+ G + ++A+K R + SE+ +F E +++KL H LV+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
++ LV+EFM + L L +RGL + + + +G+ YL E +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKS 539
RDL A N L+ + K+SDFGM R + +T + +PE YS KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKS 185
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFGVL+ E+ + + N+S ++ L P L T
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI----------STGFRLYKPRLAST---- 231
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
I C +E DRP S ++ L
Sbjct: 232 ---HVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 419
+G G FG V+ G + ++A+K R + SE+ +F E +++KL H LV+L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
++ LV+EFM + L L +RGL + + + +G+ YL E +IH
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKS 539
RDL A N L+ + K+SDFGM R F + ++ + +PE YS KS
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFGVL+ E+ + + N+S ++ L P L T
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI----------STGFRLYKPRLAST---- 229
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
I C +E DRP S ++ L
Sbjct: 230 ---HVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 27/253 (10%)
Query: 331 RGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCS 390
RG+ D +Y ++E +V S +G G FG VYKG + + ++ +
Sbjct: 22 RGQRDS----SYYWEIEASEVMLST-----RIGSGSFGTVYKGKWHGDVAVKILKVVDPT 72
Query: 391 EQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLL 450
+ F NEV ++ K +H N++ +G+ D +V ++ SSL L + +
Sbjct: 73 PEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQM 131
Query: 451 CWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE 510
+ I+I +G+ YLH + IIHRD+K++N+ L + KI DFG+A + +
Sbjct: 132 F--QLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186
Query: 511 GEVNTARIVGTYGYMAPEYAM---EGLYSIKSDVFSFGVLLIEIITG---------RRNT 558
G + G+ +MAPE +S +SDV+S+G++L E++TG R
Sbjct: 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
Query: 559 GFNQSRGATAPNL 571
F RG +P+L
Sbjct: 247 IFMVGRGYASPDL 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 119/268 (44%), Gaps = 24/268 (8%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
+G G FG V+ G + ++A+K + S +F E +++KL H LV+L G C++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
LV+EFM + L L +RGL + + + +G+ YL E +IHRD
Sbjct: 94 QAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 148
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDV 541
L A N L+ + K+SDFGM R F + ++ + +PE YS KSDV
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 542 FSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEF 601
+SFGVL+ E+ + + N+S ++ L P L T
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSEVVEDI----------STGFRLYKPRLAST------ 251
Query: 602 LRYIHIGLLCVQEDAFDRPTMSSVVVML 629
I C +E DRP S ++ L
Sbjct: 252 -HVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 9/197 (4%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
+G G FG VYKG + + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ +V ++ SSL L + + K I+I +G+ YLH S IIHRD
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAM---EGLYSIK 538
LK++N+ L D KI DFG+A + G ++ G+ +MAPE YS +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 539 SDVFSFGVLLIEIITGR 555
SDV++FG++L E++TG+
Sbjct: 206 SDVYAFGIVLYELMTGQ 222
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPV----YKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V Y + + G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ EF+P SL L ++R + K + + I KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 135
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 9/197 (4%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
+G G FG VYKG + + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+ +V ++ SSL L + + K I+I +G+ YLH S IIHRD
Sbjct: 92 -PQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAM---EGLYSIK 538
LK++N+ L D KI DFG+A + G ++ G+ +MAPE YS +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 539 SDVFSFGVLLIEIITGR 555
SDV++FG++L E++TG+
Sbjct: 206 SDVYAFGIVLYELMTGQ 222
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLSDGKEIAV-KRLSSCSEQGNAEFTNEVLLILKLQHKNL 412
S+ +LG+G FG K + E+ V K L E+ F EV ++ L+H N+
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 413 VKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
+K +G + E++ +L I+ + WS+R++ I G+ YLH
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLHS- 126
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR------------IVG 520
+ IIHRDL + N L+ + N ++DFG+AR+ + + R +VG
Sbjct: 127 --MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNT 558
+MAPE Y K DVFSFG++L EII GR N
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNA 221
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 120/270 (44%), Gaps = 28/270 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 419
+G G FG V+ G + ++A+K R + SE+ +F E +++KL H LV+L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
++ LV EFM + L L +RGL + + + +G+ YL E +IH
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKS 539
RDL A N L+ + K+SDFGM R + +T + +PE YS KS
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKS 186
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
DV+SFGVL+ E+ + + N+S ++ L P L T
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI----------STGFRLYKPRLAST---- 232
Query: 600 EFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
I C +E DRP S ++ L
Sbjct: 233 ---HVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L++ + MP L + + + + LL W +I
Sbjct: 76 DNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------A 128
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 129 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L++ + MP L + + + + LL W +I
Sbjct: 75 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 362 LGQGGFGPVYKGVLSD------GKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 414
LGQG FG VY+G D +AVK ++ S S + EF NE ++ ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK-------RGLLCWSKRINIVNGIVKGIL 467
LLG G L+V E M + L + L R R + I + I G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YL+ + +HRDL A N ++ +D KI DFGM R ++ + + +MAP
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDL 587
E +G+++ SD++SFGV+L EI + +G + +L + +G LD
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV----MDGGYLD- 249
Query: 588 IDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETITLCQPQKPAFSF 646
D C P+ R + +C Q + RPT +V +L+ + P P SF
Sbjct: 250 ----QPDNC-PE---RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD----LHPSFPEVSF 296
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L++ + MP L + + + + LL W +I
Sbjct: 76 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 128
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 129 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 140/292 (47%), Gaps = 42/292 (14%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSSCSEQGNAE-------FTNEVL 402
+A + +G+GGFG V+KG ++ D +A+K L +G E F EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
++ L H N+VKL G + +V EF+P L L D K + WS ++ ++ I
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDI 131
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLD-YDMN----PKISDFGMARIFAGSEGEVNTAR 517
GI Y+ ++ I+HRDL++ N+ L D N K++DFG+++ S +
Sbjct: 132 ALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS-----VSG 185
Query: 518 IVGTYGYMAPEY--AMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQ-SRGATAPNLLAY 574
++G + +MAPE A E Y+ K+D +SF ++L I+TG F++ S G + +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--EGPFDEYSYGK-----IKF 238
Query: 575 AWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVV 626
+ EG + P + + C P R ++ LC D RP S +V
Sbjct: 239 INMIREEG-----LRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIV 281
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 81 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 133
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 134 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L++ + MP L + + + + LL W +I
Sbjct: 77 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 362 LGQGGFGPVYKGVLSD------GKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 414
LGQG FG VY+G D +AVK ++ S S + EF NE ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK-------RGLLCWSKRINIVNGIVKGIL 467
LLG G L+V E M + L + L R R + I + I G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YL+ + +HRDL A N ++ +D KI DFGM R ++ + + +MAP
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDL 587
E +G+++ SD++SFGV+L EI + +G + +L + +G LD
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVM----DGGYLD- 252
Query: 588 IDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETITLCQPQKPAFSF 646
D C P+ R + +C Q + RPT +V +L+ + P P SF
Sbjct: 253 ----QPDNC-PE---RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD----LHPSFPEVSF 299
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 85 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 137
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 138 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L++ + MP L + + + + LL W +I
Sbjct: 78 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L++ + MP L + + + + LL W +I
Sbjct: 79 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 131
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 132 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 362 LGQGGFGPVYKGVLSD------GKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 414
LGQG FG VY+G D +AVK ++ S S + EF NE ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK-------RGLLCWSKRINIVNGIVKGIL 467
LLG G L+V E M + L + L R R + I + I G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YL+ + +HRDL A N ++ +D KI DFGM R ++ + + +MAP
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDL 587
E +G+++ SD++SFGV+L EI + +G + +L + +G LD
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV----MDGGYLD- 252
Query: 588 IDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETITLCQPQKPAFSF 646
D C P+ R + +C Q + RPT +V +L+ + P P SF
Sbjct: 253 ----QPDNC-PE---RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD----LHPSFPEVSF 299
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 100 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 152
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 153 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 69 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 121
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 122 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 77 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 78 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 78 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 14/210 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH 409
++ + LG G FG V+ + ++AVK + S A F E ++ LQH
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 69
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
LVKL V + ++ EFM SL D + D + L K I+ I +G+ +
Sbjct: 70 DKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAF 126
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMA 526
+ + + IHRDL+A+N+L+ + KI+DFG+AR+ +E TAR + + A
Sbjct: 127 IEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTA 180
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT-GR 555
PE G ++IKSDV+SFG+LL+EI+T GR
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 78 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPV----YKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V Y + + G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 131
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 191 SKFSVASDVWSFGVVLYELFT 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPV----YKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V Y + + G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 163
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPV----YKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V Y + + G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 135
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 82 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 14/213 (6%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILK 406
+ ++ + LG G FG V+ + ++AVK + S A F E ++
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKT 239
Query: 407 LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKG 465
LQH LVKL V + ++ EFM SL D + D + L K I+ I +G
Sbjct: 240 LQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEG 296
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--G 523
+ ++ + + IHRDL+A+N+L+ + KI+DFG+AR+ +E TAR +
Sbjct: 297 MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIK 350
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT-GR 555
+ APE G ++IKSDV+SFG+LL+EI+T GR
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPV----YKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V Y + + G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 139
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 199 SKFSVASDVWSFGVVLYELFT 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPVYK---GVLSD--GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V L D G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 130
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 190 SKFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPVYK---GVLSD--GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V L D G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 137
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 197 SKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPV----YKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V Y + + G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 138
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 198 SKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPV----YKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V Y + + G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 132
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPVYK---GVLSD--GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V L D G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 132
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPVYK---GVLSD--GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V L D G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 136
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 196 SKFSVASDVWSFGVVLYELFT 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPV----YKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V Y + + G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 150
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 42/292 (14%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSSCSEQGNAE-------FTNEVL 402
+A + +G+GGFG V+KG ++ D +A+K L +G E F EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
++ L H N+VKL G + +V EF+P L L D K + WS ++ ++ I
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDI 131
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLD-YDMN----PKISDFGMARIFAGSEGEVNTAR 517
GI Y+ ++ I+HRDL++ N+ L D N K++DFG ++ S +
Sbjct: 132 ALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS-----VSG 185
Query: 518 IVGTYGYMAPEY--AMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQ-SRGATAPNLLAY 574
++G + +MAPE A E Y+ K+D +SF ++L I+TG F++ S G + +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--EGPFDEYSYGK-----IKF 238
Query: 575 AWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVV 626
+ EG + P + + C P R ++ LC D RP S +V
Sbjct: 239 INMIREEG-----LRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIV 281
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L++ + MP L + + + + LL W +I
Sbjct: 79 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 131
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG A++ E E +
Sbjct: 132 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L++ + MP L + + + + LL W +I
Sbjct: 77 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG A++ E E +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPVYK---GVLSD--GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V L D G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 150
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L++ + MP L + + + + LL W +I
Sbjct: 77 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG A++ E E +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 109/205 (53%), Gaps = 11/205 (5%)
Query: 355 NFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRL--SSCSEQGNAE-FTNEVLLILKLQHK 410
+F N+LG+G F VY+ + G E+A+K + + + G + NEV + +L+H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
++++L + D + LV E N ++ L + K ++ + ++ I+ G+LYLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP--FSENEARHFMHQIITGMLYLH 129
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
I+HRDL SN+LL +MN KI+DFG+A + T + GT Y++PE A
Sbjct: 130 SHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIA 184
Query: 531 MEGLYSIKSDVFSFGVLLIEIITGR 555
+ ++SDV+S G + ++ GR
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 27/224 (12%)
Query: 345 DLETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLL 403
DL D D +LG+G +G VY G LS+ IA+K + + + E+ L
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72
Query: 404 ILKLQHKNLVKLLG-FCVDGDEKLLVYEFMPNSSLDAIL---FDPRK---RGLLCWSKRI 456
L+HKN+V+ LG F +G K+ + E +P SL A+L + P K + + ++K+
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ- 130
Query: 457 NIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLD-YDMNPKISDFGMARIFAGSEGEVN- 514
I++G+ YLH++ +I+HRD+K NVL++ Y KISDFG ++ AG +N
Sbjct: 131 -----ILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG----INP 178
Query: 515 -TARIVGTYGYMAPEYAMEGL--YSIKSDVFSFGVLLIEIITGR 555
T GT YMAPE +G Y +D++S G +IE+ TG+
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 77 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG A++ E E +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG A++ E E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPV----YKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V Y + + G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 132
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 114/215 (53%), Gaps = 22/215 (10%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFT-NEVLLILKLQH 409
++S F LG G + VYKG+ + G +A+K + SE+G E+ L+ +L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPN---SSLDAILFDPRKRGLLCWSKRINIVN----GI 462
+N+V+L ++ LV+EFM N +D+ RGL +N+V +
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGL-----ELNLVKYFQWQL 117
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT-ARIVGT 521
++G+ + HE+ +I+HRDLK N+L++ K+ DFG+AR F VNT + V T
Sbjct: 118 LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP---VNTFSSEVVT 171
Query: 522 YGYMAPEYAM-EGLYSIKSDVFSFGVLLIEIITGR 555
Y AP+ M YS D++S G +L E+ITG+
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 82 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG A++ E E +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 72 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 124
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
+G+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 125 EGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 362 LGQGGFGPVYKGVLSD------GKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 414
LGQG FG VY+G D +AVK ++ S S + EF NE ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK-------RGLLCWSKRINIVNGIVKGIL 467
LLG G L+V E M + L + L R R + I + I G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YL+ + +HRDL A N ++ +D KI DFGM R ++ + + +MAP
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDL 587
E +G+++ SD++SFGV+L EI + +G + +L + +G LD
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV----MDGGYLD- 252
Query: 588 IDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETITLCQPQKPAFSF 646
D C P+ R + +C Q + RPT +V +L+ + P P SF
Sbjct: 253 ----QPDNC-PE---RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD----LHPSFPEVSF 299
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 42/292 (14%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSSCSEQGNAE-------FTNEVL 402
+A + +G+GGFG V+KG ++ D +A+K L +G E F EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
++ L H N+VKL G + +V EF+P L L D K + WS ++ ++ I
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDI 131
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLD-YDMN----PKISDFGMARIFAGSEGEVNTAR 517
GI Y+ ++ I+HRDL++ N+ L D N K++DF +++ S +
Sbjct: 132 ALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS-----VSG 185
Query: 518 IVGTYGYMAPEY--AMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQ-SRGATAPNLLAY 574
++G + +MAPE A E Y+ K+D +SF ++L I+TG F++ S G + +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--EGPFDEYSYGK-----IKF 238
Query: 575 AWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVV 626
+ EG + P + + C P R ++ LC D RP S +V
Sbjct: 239 INMIREEG-----LRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIV 281
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 362 LGQGGFGPVYKGVLSD------GKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 414
LGQG FG VY+G D +AVK ++ S S + EF NE ++ ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK-------RGLLCWSKRINIVNGIVKGIL 467
LLG G L+V E M + L + L R R + I + I G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YL+ + +HRDL A N ++ +D KI DFGM R ++ + + +MAP
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDL 587
E +G+++ SD++SFGV+L EI + +G + +L + +G LD
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVM----DGGYLD- 251
Query: 588 IDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETITLCQPQKPAFSF 646
D C P+ R + +C Q + RPT +V +L+ + P P SF
Sbjct: 252 ----QPDNC-PE---RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD----LHPSFPEVSF 298
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +L G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPV----YKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V Y + + G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L +R + K + + I KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--IDHIKLLQYTSQICKGMEYL---GT 135
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHRDL N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 27/211 (12%)
Query: 358 DSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
D +LG+G +G VY G LS+ IA+K + + + E+ L L+HKN+V+ L
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 417 G-FCVDGDEKLLVYEFMPNSSLDAIL---FDPRK---RGLLCWSKRINIVNGIVKGILYL 469
G F +G K+ + E +P SL A+L + P K + + ++K+ I++G+ YL
Sbjct: 72 GSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ------ILEGLKYL 124
Query: 470 HEDSRLRIIHRDLKASNVLLD-YDMNPKISDFGMARIFAGSEGEVN--TARIVGTYGYMA 526
H++ +I+HRD+K NVL++ Y KISDFG ++ AG +N T GT YMA
Sbjct: 125 HDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG----INPCTETFTGTLQYMA 177
Query: 527 PEYAMEGL--YSIKSDVFSFGVLLIEIITGR 555
PE +G Y +D++S G +IE+ TG+
Sbjct: 178 PEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +L G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L++ + MP L + + + + LL W +I
Sbjct: 82 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 140/300 (46%), Gaps = 50/300 (16%)
Query: 333 RDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSE 391
+D D+ F D E L FSD +G G FG VY + + + +A+K++S +
Sbjct: 39 KDPDVAELFFKDDPEKL------FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK 92
Query: 392 QGNAEFTN---EVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRG 448
Q N ++ + EV + KL+H N ++ G + LV E+ S+ D L + K+
Sbjct: 93 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKP 150
Query: 449 LLCWSKRINIV---NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARI 505
L + + I +G ++G+ YLH + +IHRD+KA N+LL K+ DFG A I
Sbjct: 151 L----QEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASI 203
Query: 506 FAGSEGEVNTARIVGTYGYMAPEYAM---EGLYSIKSDVFSFGVLLIEIITGRRNTGFNQ 562
A + VGT +MAPE + EG Y K DV+S G+ IE + R+ FN
Sbjct: 204 MAPAN------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNM 256
Query: 563 SRGATAPNLLAYAWHL-WNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPT 621
N ++ +H+ NE P L + F ++ C+Q+ DRPT
Sbjct: 257 -------NAMSALYHIAQNES-------PALQSGHWSEYFRNFVDS---CLQKIPQDRPT 299
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +LG G FG VYKG+ + +G+++ A+ L + S + N E +E ++ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 109 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 161
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 162 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 20/210 (9%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEI----AVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ F +L G FG VYKG+ + +G+++ A+K L + S + N E +E ++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR----KRGLLCWSKRINIVNGIV 463
+ ++ +LLG C+ +L+ + MP L + + + + LL W +I
Sbjct: 82 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL ED RL +HRDL A NVL+ + KI+DFG+A++ E E +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MA E + +Y+ +SDV+S+GV + E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 362 LGQGGFGPVYKGVLSD------GKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 414
LGQG FG VY+G D +AVK ++ S S + EF NE ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK-------RGLLCWSKRINIVNGIVKGIL 467
LLG G L+V E M + L + L R R + I + I G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YL+ + +HRDL A N ++ +D KI DFGM R + + + +MAP
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDL 587
E +G+++ SD++SFGV+L EI + +G + +L + +G LD
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV----MDGGYLD- 252
Query: 588 IDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETITLCQPQKPAFSF 646
D C P+ R + +C Q + RPT +V +L+ + P P SF
Sbjct: 253 ----QPDNC-PE---RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD----LHPSFPEVSF 299
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 106/199 (53%), Gaps = 18/199 (9%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
+GQG G VY + ++ G+E+A+++++ + NE+L++ + ++ N+V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 421 DGDEKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
GDE +V E++ SL ++ D + +C ++ + +LH + +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC--------RECLQALEFLHSN---Q 136
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
+IHRD+K+ N+LL D + K++DFG + + +T +VGT +MAPE Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYG 194
Query: 537 IKSDVFSFGVLLIEIITGR 555
K D++S G++ IE+I G
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 362 LGQGGFGPV----YKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V Y + + G+ +AVK+L +E+ +F E+ ++ LQH N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 417 GFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
G C + L+ E++P SL L ++R + K + + I KG+ YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GT 133
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAME 532
R IHR+L N+L++ + KI DFG+ ++ + E + G + APE E
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLP-QDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S+ SDV+SFGV+L E+ T
Sbjct: 193 SKFSVASDVWSFGVVLYELFT 213
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 12/222 (5%)
Query: 336 DLKAQDFYID-LETLDVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQG 393
DL ++ Y ++ ++ ++ + + LG G +G VY GV +AVK L + +
Sbjct: 13 DLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV 72
Query: 394 NAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWS 453
EF E ++ +++H NLV+LLG C +V E+MP +L L + + +
Sbjct: 73 E-EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-V 130
Query: 454 KRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV 513
+ + I + YL + + IHRDL A N L+ + K++DFG++R+ G+
Sbjct: 131 VLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVADFGLSRLMT---GDT 184
Query: 514 NTARIVGTY--GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
TA + + APE +SIKSDV++FGVLL EI T
Sbjct: 185 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 44/277 (15%)
Query: 356 FSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTN---EVLLILKLQHKN 411
FSD +G G FG VY + + + +A+K++S +Q N ++ + EV + KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV---NGIVKGILY 468
++ G + LV E+ S+ D L + K+ L + + I +G ++G+ Y
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPL----QEVEIAAVTHGALQGLAY 130
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH + +IHRD+KA N+LL K+ DFG A I A + VGT +MAPE
Sbjct: 131 LHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPE 181
Query: 529 YAM---EGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHL-WNEGNA 584
+ EG Y K DV+S G+ IE + R+ FN N ++ +H+ NE
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNM-------NAMSALYHIAQNES-- 231
Query: 585 LDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPT 621
P L + F ++ C+Q+ DRPT
Sbjct: 232 -----PALQSGHWSEYFRNFVDS---CLQKIPQDRPT 260
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 362 LGQGGFGPVYKGVLSD------GKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 414
LGQG FG VY+G D +AVK ++ S S + EF NE ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK-------RGLLCWSKRINIVNGIVKGIL 467
LLG G L+V E M + L + L R R + I + I G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YL+ + +HR+L A N ++ +D KI DFGM R ++ + + +MAP
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDL 587
E +G+++ SD++SFGV+L EI + +G + +L + +G LD
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVM----DGGYLD- 252
Query: 588 IDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETITLCQPQKPAFSF 646
D C P+ R + +C Q + RPT +V +L+ + P P SF
Sbjct: 253 ----QPDNC-PE---RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD----LHPSFPEVSF 299
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 362 LGQGGFGPVYKGVLSD------GKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 414
LGQG FG VY+G D +AVK ++ S S + EF NE ++ ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK-------RGLLCWSKRINIVNGIVKGIL 467
LLG G L+V E M + L + L R R + I + I G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YL+ + +HR+L A N ++ +D KI DFGM R ++ + + +MAP
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDL 587
E +G+++ SD++SFGV+L EI + +G + +L + +G LD
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVM----DGGYLD- 253
Query: 588 IDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETITLCQPQKPAFSF 646
D C P+ R + +C Q + RPT +V +L+ + P P SF
Sbjct: 254 ----QPDNC-PE---RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD----LHPSFPEVSF 300
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 109/211 (51%), Gaps = 20/211 (9%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILK 406
+ ++ + LG G FG V+ + ++AVK + S A F E ++
Sbjct: 175 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKT 233
Query: 407 LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKG 465
LQH LVKL V + ++ EFM SL D + D + L K I+ I +G
Sbjct: 234 LQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEG 290
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYM 525
+ ++ + + IHRDL+A+N+L+ + KI+DFG+AR+ G++ + +
Sbjct: 291 MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV--GAKFPIK---------WT 336
Query: 526 APEYAMEGLYSIKSDVFSFGVLLIEIIT-GR 555
APE G ++IKSDV+SFG+LL+EI+T GR
Sbjct: 337 APEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 27/272 (9%)
Query: 359 SNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
++G+G FG V K K++A+K++ S SE+ F E+ + ++ H N+VKL G
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRII 478
C++ LV E+ SL +L + ++ +G+ YLH +I
Sbjct: 71 CLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 479 HRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSI 537
HRDLK N+LL KI DFG A + + + G+ +MAPE YS
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSE 183
Query: 538 KSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCS 597
K DVFS+G++L E+IT R+ F++ G W + N PL+ +
Sbjct: 184 KCDVFSWGIILWEVITRRKP--FDEIGGPA----FRIMWAVHNGTRP-----PLIKNLPK 232
Query: 598 PDEFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
P E L C +D RP+M +V ++
Sbjct: 233 PIESLM-----TRCWSKDPSQRPSMEEIVKIM 259
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 105/197 (53%), Gaps = 11/197 (5%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLGFC 419
+G+G +G VYK S G+ +A+KR+ +E T E+ L+ +L H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
LV+EFM L +L D K GL +I + +++G+ + H+ RI+H
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQH---RILH 142
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAM-EGLYSIK 538
RDLK N+L++ D K++DFG+AR F G T +V T Y AP+ M YS
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 539 SDVFSFGVLLIEIITGR 555
D++S G + E+ITG+
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 105/197 (53%), Gaps = 11/197 (5%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLGFC 419
+G+G +G VYK S G+ +A+KR+ +E T E+ L+ +L H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
LV+EFM L +L D K GL +I + +++G+ + H+ RI+H
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQH---RILH 142
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAM-EGLYSIK 538
RDLK N+L++ D K++DFG+AR F G T +V T Y AP+ M YS
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 539 SDVFSFGVLLIEIITGR 555
D++S G + E+ITG+
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 27/272 (9%)
Query: 359 SNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
++G+G FG V K K++A+K++ S SE+ F E+ + ++ H N+VKL G
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRII 478
C++ LV E+ SL +L + ++ +G+ YLH +I
Sbjct: 70 CLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 479 HRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSI 537
HRDLK N+LL KI DFG A + + + G+ +MAPE YS
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSE 182
Query: 538 KSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCS 597
K DVFS+G++L E+IT R+ F++ G W + N PL+ +
Sbjct: 183 KCDVFSWGIILWEVITRRKP--FDEIGGPA----FRIMWAVHNGTRP-----PLIKNLPK 231
Query: 598 PDEFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
P E L C +D RP+M +V ++
Sbjct: 232 PIESLM-----TRCWSKDPSQRPSMEEIVKIM 258
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 18/199 (9%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
+GQG G VY + ++ G+E+A+++++ + NE+L++ + ++ N+V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 421 DGDEKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
GDE +V E++ SL ++ D + +C ++ + +LH + +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC--------RECLQALEFLHSN---Q 136
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
+IHRD+K+ N+LL D + K++DFG + + + +VGT +MAPE Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYG 194
Query: 537 IKSDVFSFGVLLIEIITGR 555
K D++S G++ IE+I G
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 344 IDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVL 402
+ L+ ++ ++ + + LG G FG VY+GV +AVK L + + EF E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 59
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
++ +++H NLV+LLG C ++ EFM +L L + ++ + + + I
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQI 118
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 119 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTXTAHAGAKF 172
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 18/199 (9%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
+GQG G VY + ++ G+E+A+++++ + NE+L++ + ++ N+V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 421 DGDEKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
GDE +V E++ SL ++ D + +C ++ + +LH + +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC--------RECLQALEFLHSN---Q 136
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
+IHRD+K+ N+LL D + K++DFG + + + +VGT +MAPE Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYG 194
Query: 537 IKSDVFSFGVLLIEIITGR 555
K D++S G++ IE+I G
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 18/199 (9%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
+GQG G VY + ++ G+E+A+++++ + NE+L++ + ++ N+V L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 421 DGDEKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
GDE +V E++ SL ++ D + +C ++ + +LH + +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC--------RECLQALEFLHSN---Q 137
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
+IHRD+K+ N+LL D + K++DFG + + + +VGT +MAPE Y
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYG 195
Query: 537 IKSDVFSFGVLLIEIITGR 555
K D++S G++ IE+I G
Sbjct: 196 PKVDIWSLGIMAIEMIEGE 214
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 120/271 (44%), Gaps = 41/271 (15%)
Query: 311 QIQLHKIGDASKTGLRYQHVRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPV 370
Q+Q+ ++ +S Y R + DLK + N +LG G FG V
Sbjct: 12 QLQMVQVTGSSDNEYFYVDFREYEYDLK----------WEFPRENLEFGKVLGSGAFGKV 61
Query: 371 YK----GVLSDGK--EIAVKRLSSCSEQGNAE-FTNEVLLILKL-QHKNLVKLLGFCVDG 422
G+ G ++AVK L ++ E +E+ ++ +L H+N+V LLG C
Sbjct: 62 MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121
Query: 423 DEKLLVYEF-------------MPNSSLDAILFDPRKR-------GLLCWSKRINIVNGI 462
L++E+ S D I ++ +KR +L + + +
Sbjct: 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQV 181
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
KG+ +L S +HRDL A NVL+ + KI DFG+AR V
Sbjct: 182 AKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV 238
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE EG+Y+IKSDV+S+G+LL EI +
Sbjct: 239 KWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 14/207 (6%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGK----EIAVKRL-SSCSEQGNAEFTNEVLLILKL 407
+ +LG G FG VYKG+ + DG+ +A+K L + S + N E +E ++ +
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMP-NSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
+ +LLG C+ +L V + MP LD + RG L +N I KG+
Sbjct: 77 GSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVR---ENRGRLGSQDLLNWCMQIAKGM 132
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
YL + +R++HRDL A NVL+ + KI+DFG+AR+ E E + +MA
Sbjct: 133 SYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E + ++ +SDV+S+GV + E++T
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 106/199 (53%), Gaps = 18/199 (9%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
+GQG G VY + ++ G+E+A+++++ + NE+L++ + ++ N+V L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 421 DGDEKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
GDE +V E++ SL ++ D + +C ++ + +LH + +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC--------RECLQALEFLHSN---Q 137
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
+IHR++K+ N+LL D + K++DFG + + +T +VGT +MAPE Y
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYG 195
Query: 537 IKSDVFSFGVLLIEIITGR 555
K D++S G++ IE+I G
Sbjct: 196 PKVDIWSLGIMAIEMIEGE 214
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 362 LGQGGFGPVYKGVL-----SDGKEIAVKRLSSCSEQGN--AEFTNEVLLILKLQHKNLVK 414
LG+G FG V + G+++AVK L S GN A+ E+ ++ L H+N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVK 87
Query: 415 LLGFCVD--GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
G C + G+ L+ EF+P+ SL L P+ + + +++ I KG+ YL
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--G 143
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE--VNTARIVGTYGYMAPEYA 530
SR + +HRDL A NVL++ + KI DFG+ + + V R + Y APE
Sbjct: 144 SR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 531 MEGLYSIKSDVFSFGVLLIEIIT 553
M+ + I SDV+SFGV L E++T
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 362 LGQGGFGPVYKGVL-----SDGKEIAVKRLSSCSEQGN--AEFTNEVLLILKLQHKNLVK 414
LG+G FG V + G+++AVK L S GN A+ E+ ++ L H+N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVK 75
Query: 415 LLGFCVD--GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
G C + G+ L+ EF+P+ SL L P+ + + +++ I KG+ YL
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--G 131
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE--GEVNTARIVGTYGYMAPEYA 530
SR + +HRDL A NVL++ + KI DFG+ + + V R + Y APE
Sbjct: 132 SR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 531 MEGLYSIKSDVFSFGVLLIEIIT 553
M+ + I SDV+SFGV L E++T
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 38/282 (13%)
Query: 360 NMLGQGGFGPVYKGVL-SDGKE---IAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVK 414
++G G FG V +G L + GK+ +A+K L +E+ EF +E ++ + +H N+++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L G + +++ EFM N +LD+ L G + + ++ GI G+ YL E
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIASGMRYLAE--- 136
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIF-AGSEGEVNTARIVGTYG--YMAPEYAM 531
+ +HRDL A N+L++ ++ K+SDFG++R S T+ + G + APE
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 532 EGLYSIKSDVFSFGVLLIEIIT-GRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDP 590
++ SD +S+G+++ E+++ G R W + N+ D+I+
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPY-----------------WDMSNQ----DVINA 235
Query: 591 LLTD---TCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
+ D PD + L C Q+D RP VV L
Sbjct: 236 IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 11/211 (5%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLI 404
L+ ++ ++ + + LG G +G VY+GV +AVK L + + EF E ++
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 61
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
+++H NLV+LLG C ++ EFM +L L + ++ + + + I
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISS 120
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY-- 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 121 AMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTXTAHAGAKFPI 174
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 348 TLDVATSNFSDSNMLGQGGFGPVYKGVLS-DGKE---IAVKRLSSC-SEQGNAEFTNEVL 402
T ++ S ++G G G V G L G+ +A+K L + +E+ +F +E
Sbjct: 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
++ + H N+++L G G ++V E+M N SLD L G + + ++ G+
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGV 160
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
G+ YL S L +HRDL A NVL+D ++ K+SDFG++R+ T T
Sbjct: 161 GAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT----TG 213
Query: 523 G-----YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
G + APE +S SDV+SFGV++ E++
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E+M N SLD+ L RK + + ++ GI
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TY 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG+AR+ T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 15/197 (7%)
Query: 362 LGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
LG G FG VYK + G A K + + SE+ ++ E+ ++ H +VKLLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 421 DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV-NGIVKGILYLHEDSRLRIIH 479
+ ++ EF P ++DAI+ + RGL +I +V +++ + +LH RIIH
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLE-LDRGLT--EPQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAM-----EGL 534
RDLKA NVL+ + + +++DFG++ + + ++ +GT +MAPE M +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDTP 198
Query: 535 YSIKSDVFSFGVLLIEI 551
Y K+D++S G+ LIE+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 125
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 126 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTXTAHAGAKF 179
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 15/197 (7%)
Query: 362 LGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
LG G FG VYK + G A K + + SE+ ++ E+ ++ H +VKLLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 421 DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV-NGIVKGILYLHEDSRLRIIH 479
+ ++ EF P ++DAI+ + RGL +I +V +++ + +LH RIIH
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLE-LDRGLT--EPQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAM-----EGL 534
RDLKA NVL+ + + +++DFG++ + + ++ +GT +MAPE M +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDTP 190
Query: 535 YSIKSDVFSFGVLLIEI 551
Y K+D++S G+ LIE+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 130/290 (44%), Gaps = 43/290 (14%)
Query: 362 LGQGGFG--------PVYKGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKLQHKNL 412
LG+G FG P G G+ +AVK L C Q + + E+ ++ L H+++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 413 VKLLGFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
VK G C D EK LV E++P SL L R + ++ + I +G+ YLH
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLH 129
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG-EVNTARIVG--TYGYMAP 527
IHR L A NVLLD D KI DFG+A+ A EG E R G + AP
Sbjct: 130 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYAP 184
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDL 587
E E + SDV+SFGV L E++T NQS L+ H + L L
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELLT---YCDSNQSPHTKFTELIG---HTQGQMTVLRL 238
Query: 588 IDPL-------LTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
+ L D C + + H+ C + +A RPT ++V +LQ
Sbjct: 239 TELLERGERLPRPDRCPCEIY----HLMKNCWETEASFRPTFQNLVPILQ 284
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 11/178 (6%)
Query: 378 GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 437
G+++AVK + +Q NEV+++ QH N+V++ + G+E ++ EF+ +L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 438 DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKI 497
I+ R L + + +++ + YLH +IHRD+K+ ++LL D K+
Sbjct: 130 TDIVSQVR----LNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKL 182
Query: 498 SDFGM-ARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
SDFG A+I S+ +VGT +MAPE LY+ + D++S G+++IE++ G
Sbjct: 183 SDFGFCAQI---SKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 68
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 69 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 121
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 122 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTXTAHAGAKF 175
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 23/224 (10%)
Query: 339 AQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEF 397
A D + + ++ ++ + + LG G +G VY+GV +AVK L + + EF
Sbjct: 2 AMDPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EF 60
Query: 398 TNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN 457
E ++ +++H NLV+LLG C ++ EFM +L L + C + +N
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVN 113
Query: 458 IV------NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG 511
V I + YL + + IHRDL A N L+ + K++DFG++R+ G
Sbjct: 114 AVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG--- 167
Query: 512 EVNTARIVGTY--GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ TA + + APE +SIKSDV++FGVLL EI T
Sbjct: 168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 130/290 (44%), Gaps = 43/290 (14%)
Query: 362 LGQGGFG--------PVYKGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKLQHKNL 412
LG+G FG P G G+ +AVK L C Q + + E+ ++ L H+++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 413 VKLLGFCVDGDEK--LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
VK G C D EK LV E++P SL L R + ++ + I +G+ YLH
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLH 128
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG-EVNTARIVG--TYGYMAP 527
IHR L A NVLLD D KI DFG+A+ A EG E R G + AP
Sbjct: 129 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYAP 183
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDL 587
E E + SDV+SFGV L E++T NQS L+ H + L L
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELLT---YCDSNQSPHTKFTELIG---HTQGQMTVLRL 237
Query: 588 IDPL-------LTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
+ L D C + + H+ C + +A RPT ++V +LQ
Sbjct: 238 TELLERGERLPRPDRCPCEIY----HLMKNCWETEASFRPTFQNLVPILQ 283
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 125
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 126 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKF 179
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 73 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 125
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 126 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKF 179
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 120
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 121 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKF 174
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 348 TLDVATSNFSDSNMLGQGGFGPVYKGVLS-DGKE---IAVKRLSSC-SEQGNAEFTNEVL 402
T ++ S ++G G G V G L G+ +A+K L + +E+ +F +E
Sbjct: 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
++ + H N+++L G G ++V E+M N SLD L G + + ++ G+
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGV 160
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
G+ YL S L +HRDL A NVL+D ++ K+SDFG++R+ T T
Sbjct: 161 GAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT----TG 213
Query: 523 G-----YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
G + APE +S SDV+SFGV++ E++
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 344 IDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVL 402
+ L+ ++ ++ + + LG G +G VY+GV +AVK L + + EF E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 59
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
++ +++H NLV+LLG C ++ EFM +L L + ++ + + + I
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQI 118
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 119 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTFTAHAGAKF 172
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 362 LGQGGFGPV-YKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
+G+G G V V S GK +AVK++ +Q NEV+++ QH+N+V++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 421 DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
GDE +V EF+ +L I+ R + + + +++ + LH +IHR
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHR 149
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGYMAPEYAMEGLYSIKS 539
D+K+ ++LL +D K+SDFG A EV + +VGT +MAPE Y +
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFC---AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 540 DVFSFGVLLIEIITG 554
D++S G+++IE++ G
Sbjct: 207 DIWSLGIMVIEMVDG 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 362 LGQGGFGPV-YKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
+G+G G V V S GK +AVK++ +Q NEV+++ QH+N+V++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 421 DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
GDE +V EF+ +L I+ R + + + +++ + LH +IHR
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHR 151
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGYMAPEYAMEGLYSIKS 539
D+K+ ++LL +D K+SDFG A EV + +VGT +MAPE Y +
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFC---AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 540 DVFSFGVLLIEIITG 554
D++S G+++IE++ G
Sbjct: 209 DIWSLGIMVIEMVDG 223
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 80
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 81 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 133
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 134 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKF 187
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 188 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E+M N SLD+ L RK + + ++ GI
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TY 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 158 SGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 125
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 126 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKF 179
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 120
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 121 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKF 174
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 25/228 (10%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVL------SDGKEIAVKRLSSCSEQG-NAEFT 398
L+ + ++ F + LG+ FG VYKG L + +A+K L +E EF
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 399 NEVLLILKLQHKNLVKLLG-------------FCVDGDEKLLVYEFMPNSSLDAILFDPR 445
+E +L +LQH N+V LLG +C GD + P+S + + D
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 446 KRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARI 505
+ L +++V I G+ YL S ++H+DL NVL+ +N KISD G+ R
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 506 FAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ + +MAPE M G +SI SD++S+GV+L E+ +
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 136/292 (46%), Gaps = 38/292 (13%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVL-SDGKE---IAVKRLSSC-SEQGNAEFTNEVLLI 404
++ S ++G G FG V +G L + GK+ +A+K L +E+ EF +E ++
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIM 69
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
+ +H N+++L G + +++ EFM N +LD+ L G + + ++ GI
Sbjct: 70 GQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIAS 127
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG---T 521
G+ YL E + +HRDL A N+L++ ++ K+SDFG++R + + +G
Sbjct: 128 GMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP 184
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT-GRRNTGFNQSRGATAPNLLAYAWHLWN 580
+ APE ++ SD +S+G+++ E+++ G R W + N
Sbjct: 185 IRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY-----------------WDMSN 227
Query: 581 EGNALDLIDPLLTD---TCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
+ D+I+ + D PD + L C Q+D RP VV L
Sbjct: 228 Q----DVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 25/228 (10%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVL------SDGKEIAVKRLSSCSEQG-NAEFT 398
L+ + ++ F + LG+ FG VYKG L + +A+K L +E EF
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 399 NEVLLILKLQHKNLVKLLG-------------FCVDGDEKLLVYEFMPNSSLDAILFDPR 445
+E +L +LQH N+V LLG +C GD + P+S + + D
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 446 KRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARI 505
+ L +++V I G+ YL S ++H+DL NVL+ +N KISD G+ R
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 506 FAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++ + +MAPE M G +SI SD++S+GV+L E+ +
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ Y
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKY 147
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV--NTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E N +MA
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 122
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 123 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKF 176
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 362 LGQGGFGPV-YKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
+G+G G V V S GK +AVK++ +Q NEV+++ QH+N+V++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 421 DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
GDE +V EF+ +L I+ R + + + +++ + LH +IHR
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHR 140
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGYMAPEYAMEGLYSIKS 539
D+K+ ++LL +D K+SDFG A EV + +VGT +MAPE Y +
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFC---AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 540 DVFSFGVLLIEIITG 554
D++S G+++IE++ G
Sbjct: 198 DIWSLGIMVIEMVDG 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 122
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 123 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKF 176
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 362 LGQGGFGPV-YKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
+G+G G V V S GK +AVK++ +Q NEV+++ QH+N+V++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 421 DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
GDE +V EF+ +L I+ R + + + +++ + LH +IHR
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHR 144
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGYMAPEYAMEGLYSIKS 539
D+K+ ++LL +D K+SDFG A EV + +VGT +MAPE Y +
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFC---AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 540 DVFSFGVLLIEIITG 554
D++S G+++IE++ G
Sbjct: 202 DIWSLGIMVIEMVDG 216
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 362 LGQGGFGPV-YKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
+G+G G V V S GK +AVK++ +Q NEV+++ QH+N+V++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 421 DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
GDE +V EF+ +L I+ R + + + +++ + LH +IHR
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHR 271
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGYMAPEYAMEGLYSIKS 539
D+K+ ++LL +D K+SDFG A EV + +VGT +MAPE Y +
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFC---AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 540 DVFSFGVLLIEIITG 554
D++S G+++IE++ G
Sbjct: 329 DIWSLGIMVIEMVDG 343
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ Y
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKY 147
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE--GEVNTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E N +MA
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKY 148
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE--GEVNTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E N +MA
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E+M N SLD+ L RK + + ++ GI
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TY 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ Y
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKY 143
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE--GEVNTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E N +MA
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E+M N SLD+ L RK + + ++ GI
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TY 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E+M N SLD+ L RK + + ++ GI
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 155
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TY 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 156 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKY 148
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE--GEVNTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E N +MA
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E+M N SLD+ L RK + + ++ GI
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TY 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E+M N SLD+ L RK + + ++ GI
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TY 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 115/234 (49%), Gaps = 33/234 (14%)
Query: 343 YIDLETLD---VATSNFSDS---------NMLGQGGFGPVYKGVLS-DGKE---IAVKRL 386
YID ET + A F+ ++G G FG V G L GK +A+K L
Sbjct: 20 YIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTL 79
Query: 387 S-SCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR 445
+E+ +F E ++ + H N+V L G G ++V EFM N +LDA L R
Sbjct: 80 KVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL---R 136
Query: 446 KR-GLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR 504
K G + + ++ GI G+ YL + + +HRDL A N+L++ ++ K+SDFG++R
Sbjct: 137 KHDGQFTVIQLVGMLRGIAAGMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSR 193
Query: 505 IFAGSEGEVNTARIVGTYG-----YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ V T T G + APE ++ SDV+S+G+++ E+++
Sbjct: 194 VIEDDPEAVYTT----TGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E+M N SLD+ L RK + + ++ GI
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 128
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT-Y 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ Y
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKY 167
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE--GEVNTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E N +MA
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 68
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 69 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 121
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 122 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAPAGAKF 175
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 362 LGQGGFGPV-YKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
+G+G G V V S GK +AVK++ +Q NEV+++ QH+N+V++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 421 DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
GDE +V EF+ +L I+ R + + + +++ + LH +IHR
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHR 194
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGYMAPEYAMEGLYSIKS 539
D+K+ ++LL +D K+SDFG A EV + +VGT +MAPE Y +
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFC---AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 540 DVFSFGVLLIEIITG 554
D++S G+++IE++ G
Sbjct: 252 DIWSLGIMVIEMVDG 266
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ Y
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKY 166
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE--GEVNTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E N +MA
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKF 146
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV--NTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E + N +MA
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ Y
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKY 140
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE--GEVNTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E N +MA
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 14/207 (6%)
Query: 359 SNMLGQGGFGPVYKGVLS-DGKE---IAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLV 413
++G G FG V G L GK +A+K L S +E+ +F +E ++ + H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L G +++ EFM N SLD+ L + G + + ++ GI G+ YL +
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQFTVIQLVGMLRGIAAGMKYLAD-- 153
Query: 474 RLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG---TYGYMAPEYA 530
+ +HRDL A N+L++ ++ K+SDFG++R + +G + APE
Sbjct: 154 -MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 531 MEGLYSIKSDVFSFGVLLIEIIT-GRR 556
++ SDV+S+G+++ E+++ G R
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGER 239
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 122
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHRDL A N L+ + K++DFG++R+ G + TA +
Sbjct: 123 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAPAGAKF 176
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ Y
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKY 146
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE--GEVNTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E N +MA
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ Y
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKY 145
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE--GEVNTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E N +MA
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E+M N SLD+ L RK + + ++ GI
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 145
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT-Y 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 146 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKF 148
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV--NTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E + N +MA
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKF 149
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV--NTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E + N +MA
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
H NLV+LLG C ++ EFM +L L + ++ + + + I + Y
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEY 131
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMA 526
L + + IHRDL A N L+ + K++DFG++R+ G + TA + + A
Sbjct: 132 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKFPIKWTA 185
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
PE +SIKSDV++FGVLL EI T
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ +
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKF 153
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV--NTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E + N +MA
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E+M N SLD+ L RK + + ++ GI
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TY 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG+ R+ T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
H NLV+LLG C ++ EFM +L L + ++ + + + I + Y
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEY 126
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMA 526
L + + IHRDL A N L+ + K++DFG++R+ G + TA + + A
Sbjct: 127 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKFPIKWTA 180
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
PE +SIKSDV++FGVLL EI T
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 136/294 (46%), Gaps = 45/294 (15%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSDGKE-IAVKR--LSSCSEQGNAEFTNEVLLILKLQHKN 411
++ ++G G V + KE +A+KR L C + E E+ + + H N
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPN 74
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSS-LDAILF----DPRKRGLLCWSKRINIVNGIVKGI 466
+V V DE LV + + S LD I K G+L S I+ +++G+
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFA-GSEGEVNTAR--IVGTYG 523
YLH++ + IHRD+KA N+LL D + +I+DFG++ A G + N R VGT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 524 YMAPEYAMEGL--YSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNE 581
+MAPE ME + Y K+D++SFG+ IE+ TG A +H +
Sbjct: 192 WMAPE-VMEQVRGYDFKADIWSFGITAIELATG------------------AAPYHKYPP 232
Query: 582 GNALDLI---DPLLTDTCSPD-EFLR-----YIHIGLLCVQEDAFDRPTMSSVV 626
L L DP +T D E L+ + + LC+Q+D RPT + ++
Sbjct: 233 MKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
H NLV+LLG C ++ EFM +L L + ++ + + + I + Y
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEY 126
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMA 526
L + + IHRDL A N L+ + K++DFG++R+ G + TA + + A
Sbjct: 127 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKFPIKWTA 180
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
PE +SIKSDV++FGVLL EI T
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
H NLV+LLG C ++ EFM +L L + ++ + + + I + Y
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEY 126
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMA 526
L + + IHRDL A N L+ + K++DFG++R+ G + TA + + A
Sbjct: 127 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKFPIKWTA 180
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
PE +SIKSDV++FGVLL EI T
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 23/229 (10%)
Query: 329 HVRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSS 388
H+RG Q +D E L F+ + +G+G FG VYKG+ + KE+ ++
Sbjct: 4 HLRG----FANQHSRVDPEEL------FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIID 53
Query: 389 CSEQGNAEFT--NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPN-SSLDAILFDPR 445
E + E+ ++ + + + G + + ++ E++ S+LD +
Sbjct: 54 LEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL----- 108
Query: 446 KRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARI 505
K G L + I+ I+KG+ YLH + R IHRD+KA+NVLL + K++DFG+A
Sbjct: 109 KPGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQ 165
Query: 506 FAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
++ + N VGT +MAPE + Y K+D++S G+ IE+ G
Sbjct: 166 LTDTQIKRNX--FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKF 148
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV--NTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E + N +MA
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
H NLV+LLG C ++ EFM +L L + ++ + + + I + Y
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEY 126
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMA 526
L + + IHRDL A N L+ + K++DFG++R+ G + TA + + A
Sbjct: 127 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKFPIKWTA 180
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
PE +SIKSDV++FGVLL EI T
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 25/216 (11%)
Query: 352 ATSNFSD----SNMLGQGGFGPVY--KGVLSDGKEIAVKRLS--SCSEQGNAE-FTNEVL 402
+T+ FSD +LG+G FG V K ++ G+E AVK +S ++ + E EV
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNG 461
L+ +L H N++KL F D LV E L D I+ RKR + RI +
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFSEVDAARI--IRQ 134
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLD---YDMNPKISDFGMARIFAGSEGEVNTARI 518
++ GI Y+H++ +I+HRDLK N+LL+ D N +I DFG++ F S+ +
Sbjct: 135 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--- 188
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
+GT Y+APE + G Y K DV+S GV+L +++G
Sbjct: 189 IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKF 149
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV--NTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E + N +MA
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 136/294 (46%), Gaps = 45/294 (15%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSDGKE-IAVKR--LSSCSEQGNAEFTNEVLLILKLQHKN 411
++ ++G G V + KE +A+KR L C + E E+ + + H N
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPN 69
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSS-LDAILF----DPRKRGLLCWSKRINIVNGIVKGI 466
+V V DE LV + + S LD I K G+L S I+ +++G+
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFA-GSEGEVNTAR--IVGTYG 523
YLH++ + IHRD+KA N+LL D + +I+DFG++ A G + N R VGT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 524 YMAPEYAMEGL--YSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNE 581
+MAPE ME + Y K+D++SFG+ IE+ TG A +H +
Sbjct: 187 WMAPE-VMEQVRGYDFKADIWSFGITAIELATG------------------AAPYHKYPP 227
Query: 582 GNALDLI---DPLLTDTCSPD-EFLR-----YIHIGLLCVQEDAFDRPTMSSVV 626
L L DP +T D E L+ + + LC+Q+D RPT + ++
Sbjct: 228 MKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 359 SNMLGQGGFGPVYKGVL--SDGKEI--AVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLV 413
+ ++G+G FG VY G L +DGK+I AVK L+ ++ G ++F E +++ H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 414 KLLGFCVDGD-EKLLVYEFMPNSSLDAIL----FDPRKRGLLCWSKRINIVNGIVKGILY 468
LLG C+ + L+V +M + L + +P + L+ + ++ KG+ +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKF 207
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV--NTARIVGTYGYMA 526
L + + +HRDL A N +LD K++DFG+AR E + N +MA
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E ++ KSDV+SFGVLL E++T
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 313
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 314 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 366
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHR+L A N L+ + K++DFG++R+ G + TA +
Sbjct: 367 SSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKF 420
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 421 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 213 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 271
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV------NGI 462
H NLV+LLG C ++ EFM +L L + C + +N V I
Sbjct: 272 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-------CNRQEVNAVVLLYMATQI 324
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
+ YL + + IHR+L A N L+ + K++DFG++R+ G + TA +
Sbjct: 325 SSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKF 378
Query: 523 --GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE +SIKSDV++FGVLL EI T
Sbjct: 379 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKE-----IAVKRLSSCSEQGNAE-FTN 399
E + +N LG G FG V + GKE +AVK L S + E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 400 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINI 458
E+ ++ L QH+N+V LLG C G L++ E+ D + F RK +L I
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG--DLLNFLRRKSRVLETDPAFAI 156
Query: 459 VNGIVKGILYLHEDSRL----------RIIHRDLKASNVLLDYDMNPKISDFGMARIFAG 508
N + LH S++ IHRD+ A NVLL KI DFG+AR
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 509 SEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +MAPE + +Y+++SDV+S+G+LL EI +
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 15/220 (6%)
Query: 360 NMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSE--QGNAEF---TNEVLLILKLQHKNLV 413
+LG G FG V+KGV + +G+ I + E G F T+ +L I L H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 414 KLLGFCVDGDEKLLVYEFMP-NSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
+LLG C G LV +++P S LD + + RG L +N I KG+ YL E
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSLLDHVR---QHRGALGPQLLLNWGVQIAKGMYYLEEH 152
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
++HR+L A NVLL +++DFG+A + + ++ + +MA E
Sbjct: 153 G---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 209
Query: 533 GLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLL 572
G Y+ +SDV+S+GV + E++T + R A P+LL
Sbjct: 210 GKYTHQSDVWSYGVTVWELMTFGAEP-YAGLRLAEVPDLL 248
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 15/220 (6%)
Query: 360 NMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSE-----QGNAEFTNEVLLILKLQHKNLV 413
+LG G FG V+KGV + +G+ I + E Q T+ +L I L H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 414 KLLGFCVDGDEKLLVYEFMP-NSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
+LLG C G LV +++P S LD + + RG L +N I KG+ YL E
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHVR---QHRGALGPQLLLNWGVQIAKGMYYLEEH 134
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
++HR+L A NVLL +++DFG+A + + ++ + +MA E
Sbjct: 135 G---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 533 GLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLL 572
G Y+ +SDV+S+GV + E++T + R A P+LL
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEP-YAGLRLAEVPDLL 230
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 25/216 (11%)
Query: 352 ATSNFSD----SNMLGQGGFGPVY--KGVLSDGKEIAVKRLS--SCSEQGNAE-FTNEVL 402
+T+ FSD +LG+G FG V K ++ G+E AVK +S ++ + E EV
Sbjct: 43 STAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQ 101
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNG 461
L+ +L H N++KL F D LV E L D I+ RKR + RI +
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFSEVDAARI--IRQ 157
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLD---YDMNPKISDFGMARIFAGSEGEVNTARI 518
++ GI Y+H++ +I+HRDLK N+LL+ D N +I DFG++ F S+ +
Sbjct: 158 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--- 211
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
+GT Y+APE + G Y K DV+S GV+L +++G
Sbjct: 212 IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 101/225 (44%), Gaps = 20/225 (8%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKE-----IAVKRLSSCSEQGNAE-FTN 399
E + +N LG G FG V + GKE +AVK L S + E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 400 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINI 458
E+ ++ L QH+N+V LLG C G L++ E+ D + F RK +L I
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG--DLLNFLRRKSRVLETDPAFAI 156
Query: 459 VNGIVKGILYLHEDSRL----------RIIHRDLKASNVLLDYDMNPKISDFGMARIFAG 508
N LH S++ IHRD+ A NVLL KI DFG+AR
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 509 SEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +MAPE + +Y+++SDV+S+G+LL EI +
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 25/216 (11%)
Query: 352 ATSNFSD----SNMLGQGGFGPVY--KGVLSDGKEIAVKRLS--SCSEQGNAE-FTNEVL 402
+T+ FSD +LG+G FG V K ++ G+E AVK +S ++ + E EV
Sbjct: 44 STAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQ 102
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNG 461
L+ +L H N++KL F D LV E L D I+ RKR + RI +
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFSEVDAARI--IRQ 158
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLD---YDMNPKISDFGMARIFAGSEGEVNTARI 518
++ GI Y+H++ +I+HRDLK N+LL+ D N +I DFG++ F S+ +
Sbjct: 159 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--- 212
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
+GT Y+APE + G Y K DV+S GV+L +++G
Sbjct: 213 IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 136/265 (51%), Gaps = 40/265 (15%)
Query: 352 ATSNFSD----SNMLGQGGFGPVY--KGVLSDGKEIAVKRLSS--CSEQGNAE-FTNEVL 402
+T+ FSD +LG+G FG V K ++ G+E AVK +S ++ + E EV
Sbjct: 26 STAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQ 84
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNG 461
L+ +L H N++KL F D LV E L D I+ RKR + RI +
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFSEVDAARI--IRQ 140
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLD---YDMNPKISDFGMARIFAGSEGEVNTARI 518
++ GI Y+H++ +I+HRDLK N+LL+ D N +I DFG++ F S+ +
Sbjct: 141 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--- 194
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLL------ 572
+GT Y+APE + G Y K DV+S GV+L +++G FN GA ++L
Sbjct: 195 IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG--CPPFN---GANEYDILKKVEKG 248
Query: 573 AYAWHL--WNE--GNALDLIDPLLT 593
Y + L W + +A DLI +LT
Sbjct: 249 KYTFELPQWKKVSESAKDLIRKMLT 273
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E M N SLD+ L RK + + ++ GI
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TY 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 158 SGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKG-VLSDGKE-----IAVKRLSSCSEQGNAE-FTN 399
E + +N LG G FG V + GKE +AVK L S + E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 400 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL--------- 449
E+ ++ L QH+N+V LLG C G L++ E+ L L R GL
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 450 ----LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARI 505
L ++ + + +G+ +L + IHRD+ A NVLL KI DFG+AR
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 506 FAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +MAPE + +Y+++SDV+S+G+LL EI +
Sbjct: 216 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E M N SLD+ L RK + + ++ GI
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TY 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 378 GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 437
GK++AVK++ +Q NEV+++ H N+V + + GDE +V EF+ +L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 438 DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKI 497
I+ R + + + +++ + YLH +IHRD+K+ ++LL D K+
Sbjct: 130 TDIVTHTR----MNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKL 182
Query: 498 SDFGMARIFAGSEGEVNTAR-IVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
SDFG A EV + +VGT +MAPE Y + D++S G+++IE+I G
Sbjct: 183 SDFGFC---AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 114/216 (52%), Gaps = 25/216 (11%)
Query: 352 ATSNFSD----SNMLGQGGFGPVY--KGVLSDGKEIAVKRLS--SCSEQGNAE-FTNEVL 402
+T+ FSD +LG+G FG V K ++ G+E AVK +S ++ + E EV
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNG 461
L+ +L H N+ KL F D LV E L D I+ RKR + RI +
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFSEVDAARI--IRQ 134
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLD---YDMNPKISDFGMARIFAGSEGEVNTARI 518
++ GI Y H++ +I+HRDLK N+LL+ D N +I DFG++ F S+ +
Sbjct: 135 VLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK--- 188
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
+GT Y+APE + G Y K DV+S GV+L +++G
Sbjct: 189 IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 11/210 (5%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS-DGKE---IAVKRLS-SCSEQGNAEFTNEVLLI 404
++ S + ++G G FG V G L GK +A+K L +E+ +F E ++
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
+ H N++ L G ++V E+M N SLD L + G + + ++ GI
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQLVGMLRGISA 135
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TYG 523
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 136 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ APE ++ SDV+S+G+++ E+++
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS--DGKEI--AVKRLS-SCSEQGNAEFTNEVLLI 404
++ +N S ++G G FG V G L KEI A+K L +E+ +F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIV 463
+ H N+++L G ++V E M N SLD+ L RK + + ++ GI
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 128
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT-Y 522
G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ T R
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +PE ++ SDV+S+G++L E+++
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 104/207 (50%), Gaps = 28/207 (13%)
Query: 362 LGQGGFG--------PVYKGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKLQHKNL 412
LG+G FG P G G+ +AVK L + C Q + + E+ ++ L H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 413 VKLLGFCVDGDEK--LLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIVKGILYL 469
+K G C D EK LV E++P SL L PR GL ++ + I +G+ YL
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGL---AQLLLFAQQICEGMAYL 133
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG-EVNTARIVG--TYGYMA 526
H IHR+L A NVLLD D KI DFG+A+ A EG E R G + A
Sbjct: 134 HSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYA 188
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
PE E + SDV+SFGV L E++T
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 104/207 (50%), Gaps = 28/207 (13%)
Query: 362 LGQGGFG--------PVYKGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKLQHKNL 412
LG+G FG P G G+ +AVK L + C Q + + E+ ++ L H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 413 VKLLGFCVDGDEK--LLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNGIVKGILYL 469
+K G C D EK LV E++P SL L PR GL ++ + I +G+ YL
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGL---AQLLLFAQQICEGMAYL 133
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG-EVNTARIVG--TYGYMA 526
H IHR+L A NVLLD D KI DFG+A+ A EG E R G + A
Sbjct: 134 HAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYA 188
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
PE E + SDV+SFGV L E++T
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
++ ++ + + LG G +G VY+GV +AVK L + + EF E ++ +++
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 274
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
H NLV+LLG C ++ EFM +L L + ++ + + + I + Y
Sbjct: 275 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEY 333
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMA 526
L + + IHR+L A N L+ + K++DFG++R+ G + TA + + A
Sbjct: 334 LEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTG---DTYTAHAGAKFPIKWTA 387
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIIT 553
PE +SIKSDV++FGVLL EI T
Sbjct: 388 PESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 126/298 (42%), Gaps = 50/298 (16%)
Query: 362 LGQGGFGPVYK----GVL--SDGKEIAVKRL-SSCSEQGNAEFTNEVLLILKLQHKNLVK 414
+G+G FG V++ G+L +AVK L S A+F E L+ + + N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAIL----------------------FDPRKRGLLCW 452
LLG C G L++E+M L+ L P L C
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC- 173
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
++++ I + G+ YL E + +HRDL N L+ +M KI+DFG++R ++
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLL 572
+M PE Y+ +SDV+++GV+L EI + G G ++
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS----YGLQPYYGMAHEEVI 286
Query: 573 AYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQ 630
Y +GN L C + L ++ LC + DRP+ S+ +LQ
Sbjct: 287 YYV----RDGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+NF +G+G F VY+ L DG +A+K++ + A+ E+ L+ +L H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL--FDPRKRGL---LCWSKRINIVNGIVK 464
N++K ++ +E +V E L ++ F +KR + W + + + +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE- 150
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGY 524
H SR R++HRD+K +NV + K+ D G+ R F+ ++ +VGT Y
Sbjct: 151 -----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYY 202
Query: 525 MAPEYAMEGLYSIKSDVFSFGVLLIEI 551
M+PE E Y+ KSD++S G LL E+
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 30/287 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS-DGKE---IAVKRLSSC-SEQGNAEFTNEVLLI 404
++ S ++G G FG V G L GK +A+K L + +++ +F +E ++
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
+ H N++ L G +++ E+M N SLDA L + G + + ++ GI
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIGS 142
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG-TYG 523
G+ YL S + +HRDL A N+L++ ++ K+SDFGM+R+ T R
Sbjct: 143 GMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 199
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT-GRRNTGFNQSRGATAPNLLAYAWHLWNEG 582
+ APE ++ SDV+S+G+++ E+++ G R W + N+
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY-----------------WDMSNQ- 241
Query: 583 NALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
+ + I+ D + + L C Q++ DRP +V ML
Sbjct: 242 DVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 30/287 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS-DGKE---IAVKRLSSC-SEQGNAEFTNEVLLI 404
++ S ++G G FG V G L GK +A+K L + +++ +F +E ++
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
+ H N++ L G +++ E+M N SLDA L + G + + ++ GI
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIGS 127
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT-YG 523
G+ YL S + +HRDL A N+L++ ++ K+SDFGM+R+ T R
Sbjct: 128 GMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 184
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT-GRRNTGFNQSRGATAPNLLAYAWHLWNEG 582
+ APE ++ SDV+S+G+++ E+++ G R W + N+
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY-----------------WDMSNQ- 226
Query: 583 NALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
+ + I+ D + + L C Q++ DRP +V ML
Sbjct: 227 DVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V G ++AVK + S EF E ++KL H LVK G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
+V E++ N L L +GL S+ + + + +G+ +L + IHRD
Sbjct: 75 EYPIYIVTEYISNGCLLNYL-RSHGKGLEP-SQLLEMCYDVCEGMAFLESH---QFIHRD 129
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDV 541
L A N L+D D+ K+SDFGM R + + V++ + APE YS KSDV
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 542 FSFGVLLIEIIT 553
++FG+L+ E+ +
Sbjct: 189 WAFGILMWEVFS 200
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 30/287 (10%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS-DGKE---IAVKRLSSC-SEQGNAEFTNEVLLI 404
++ S ++G G FG V G L GK +A+K L + +++ +F +E ++
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
+ H N++ L G +++ E+M N SLDA L + G + + ++ GI
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIGS 121
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT-YG 523
G+ YL S + +HRDL A N+L++ ++ K+SDFGM+R+ T R
Sbjct: 122 GMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 178
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT-GRRNTGFNQSRGATAPNLLAYAWHLWNEG 582
+ APE ++ SDV+S+G+++ E+++ G R W + N+
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY-----------------WDMSNQ- 220
Query: 583 NALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
+ + I+ D + + L C Q++ DRP +V ML
Sbjct: 221 DVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 362 LGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
LG+G +G VYK + + G+ +A+K++ E E E+ ++ + ++VK G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 421 DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRI-NIVNGIVKGILYLHEDSRLRIIH 479
+ +V E+ S+ I+ R R I I+ +KG+ YLH +R IH
Sbjct: 95 KNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIH 148
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKS 539
RD+KA N+LL+ + + K++DFG+A + N ++GT +MAPE E Y+ +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--VIGTPFWMAPEVIQEIGYNCVA 206
Query: 540 DVFSFGVLLIEIITGR 555
D++S G+ IE+ G+
Sbjct: 207 DIWSLGITAIEMAEGK 222
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 130/304 (42%), Gaps = 48/304 (15%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRL-SSCSEQGNAEFTNEVL 402
+ N LG+G FG V K K +AVK L + S + +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRG-------------- 448
++ ++ H +++KL G C LL+ E+ SL L + RK G
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 449 -------LLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFG 501
L I+ I +G+ YL E ++++HRDL A N+L+ KISDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 502 MARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFN 561
++R + V ++ +MA E + +Y+ +SDV+SFGVLL EI+T G N
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN 251
Query: 562 QSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPT 621
G L +L G+ ++ D CS +E R + L C +++ RP
Sbjct: 252 PYPGIPPERLF----NLLKTGHRME-----RPDNCS-EEMYRLM---LQCWKQEPDKRPV 298
Query: 622 MSSV 625
+ +
Sbjct: 299 FADI 302
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 360 NMLGQGGFGPVYKGVLS-DGKE---IAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVK 414
++G G FG V G L GK +A+K L S +E+ +F +E ++ + H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L G +++ EFM N SLD+ L + G + + ++ GI G+ YL +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQFTVIQLVGMLRGIAAGMKYLAD--- 127
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG---TYGYMAPEYAM 531
+ +HR L A N+L++ ++ K+SDFG++R + +G + APE
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 532 EGLYSIKSDVFSFGVLLIEIIT 553
++ SDV+S+G+++ E+++
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS 209
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 361 MLGQGGFGPVYK-GVLSDGKEIAVKRLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLG 417
MLG+G FG V K +E AVK ++ S + T EV L+ KL H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 418 FCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
D +V E L D I+ KR I+ + GI Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 477 IIHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG 533
I+HRDLK N+LL + D + KI DFG++ F + +GT Y+APE + G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRG 197
Query: 534 LYSIKSDVFSFGVLLIEIITG 554
Y K DV+S GV+L +++G
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 361 MLGQGGFGPVYK---GVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLG 417
MLG+G FG V K + + V +S + + EV L+ KL H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 418 FCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
D +V E L D I+ KR I+ + GI Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 477 IIHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG 533
I+HRDLK N+LL + D + KI DFG++ F + +GT Y+APE + G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRG 197
Query: 534 LYSIKSDVFSFGVLLIEIITG 554
Y K DV+S GV+L +++G
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 361 MLGQGGFGPVYK-GVLSDGKEIAVKRLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLG 417
MLG+G FG V K +E AVK ++ S + T EV L+ KL H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 418 FCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
D +V E L D I+ KR I+ + GI Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 477 IIHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG 533
I+HRDLK N+LL + D + KI DFG++ F + +GT Y+APE + G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRG 197
Query: 534 LYSIKSDVFSFGVLLIEIITG 554
Y K DV+S GV+L +++G
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 35/235 (14%)
Query: 326 RYQHVRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAV-- 383
+Y+HV DL +DF+ + LG G FG VYK + KE +V
Sbjct: 25 QYEHVTR---DLNPEDFWEII-------------GELGDGAFGKVYK---AQNKETSVLA 65
Query: 384 --KRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 441
K + + SE+ ++ E+ ++ H N+VKLL + ++ EF ++DA++
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 442 FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFG 501
+ + L S+ + + + YLH++ +IIHRDLKA N+L D + K++DFG
Sbjct: 126 LELERP--LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFG 180
Query: 502 MARIFAGSEGEVNTARIVGTYGYMAPEYAM-----EGLYSIKSDVFSFGVLLIEI 551
++ + +GT +MAPE M + Y K+DV+S G+ LIE+
Sbjct: 181 VSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 130/304 (42%), Gaps = 48/304 (15%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRL-SSCSEQGNAEFTNEVL 402
+ N LG+G FG V K K +AVK L + S + +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRG-------------- 448
++ ++ H +++KL G C LL+ E+ SL L + RK G
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 449 -------LLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFG 501
L I+ I +G+ YL E ++++HRDL A N+L+ KISDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 502 MARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFN 561
++R + V ++ +MA E + +Y+ +SDV+SFGVLL EI+T G N
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN 251
Query: 562 QSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPT 621
G L +L G+ ++ D CS +E R + L C +++ RP
Sbjct: 252 PYPGIPPERLF----NLLKTGHRME-----RPDNCS-EEMYRLM---LQCWKQEPDKRPV 298
Query: 622 MSSV 625
+ +
Sbjct: 299 FADI 302
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 35/235 (14%)
Query: 326 RYQHVRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAV-- 383
+Y+HV DL +DF+ + LG G FG VYK + KE +V
Sbjct: 25 QYEHVTR---DLNPEDFWEII-------------GELGDGAFGKVYK---AQNKETSVLA 65
Query: 384 --KRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 441
K + + SE+ ++ E+ ++ H N+VKLL + ++ EF ++DA++
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 442 FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFG 501
+ + L S+ + + + YLH++ +IIHRDLKA N+L D + K++DFG
Sbjct: 126 LELERP--LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFG 180
Query: 502 MARIFAGSEGEVNTARIVGTYGYMAPEYAM-----EGLYSIKSDVFSFGVLLIEI 551
++ + +GT +MAPE M + Y K+DV+S G+ LIE+
Sbjct: 181 VSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 35/235 (14%)
Query: 326 RYQHVRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAV-- 383
+Y+HV DL +DF+ + LG G FG VYK + KE +V
Sbjct: 25 QYEHVTR---DLNPEDFWEII-------------GELGDGAFGKVYK---AQNKETSVLA 65
Query: 384 --KRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 441
K + + SE+ ++ E+ ++ H N+VKLL + ++ EF ++DA++
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 442 FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFG 501
+ + L S+ + + + YLH++ +IIHRDLKA N+L D + K++DFG
Sbjct: 126 LELERP--LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFG 180
Query: 502 MARIFAGSEGEVNTARIVGTYGYMAPEYAM-----EGLYSIKSDVFSFGVLLIEI 551
++ + +GT +MAPE M + Y K+DV+S G+ LIE+
Sbjct: 181 VSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 362 LGQGGFGPVYKGVLSDGK----EIAVKRL---SSCSEQGNAEFTNEVLLILKLQHKNLVK 414
LG GG VY L++ ++A+K + E+ F EV +L H+N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
++ + D LV E++ +L + G L IN N I+ GI + H+
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHD--- 129
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
+RI+HRD+K N+L+D + KI DFG+A+ + + T ++GT Y +PE A
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-SLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
+D++S G++L E++ G
Sbjct: 189 TDECTDIYSIGIVLYEMLVGE 209
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKG-VLSDGKE-----IAVKRLSSCSEQGNAE-FTN 399
E + +N LG G FG V + GKE +AVK L S + E +
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 400 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL-------FDPRKRGLLC 451
E+ ++ L QH+N+V LLG C G L++ E+ L L D L
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 452 WSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG 511
++ + + +G+ +L + IHRD+ A NVLL KI DFG+AR
Sbjct: 151 LRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
Query: 512 EVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +MAPE + +Y+++SDV+S+G+LL EI +
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 129/304 (42%), Gaps = 48/304 (15%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRL-SSCSEQGNAEFTNEVL 402
+ N LG+G FG V K K +AVK L + S + +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRG-------------- 448
++ ++ H +++KL G C LL+ E+ SL L + RK G
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 449 -------LLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFG 501
L I+ I +G+ YL E S ++HRDL A N+L+ KISDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFG 195
Query: 502 MARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFN 561
++R + V ++ +MA E + +Y+ +SDV+SFGVLL EI+T G N
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN 251
Query: 562 QSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPT 621
G L +L G+ ++ D CS +E R + L C +++ RP
Sbjct: 252 PYPGIPPERLF----NLLKTGHRME-----RPDNCS-EEMYRLM---LQCWKQEPDKRPV 298
Query: 622 MSSV 625
+ +
Sbjct: 299 FADI 302
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKG-VLSDGKE-----IAVKRLSSCSEQGNAE-FTN 399
E + +N LG G FG V + GKE +AVK L S + E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 400 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL-------FDPRKRGLLC 451
E+ ++ L QH+N+V LLG C G L++ E+ L L D L
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 452 WSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG 511
++ + + +G+ +L + IHRD+ A NVLL KI DFG+AR
Sbjct: 159 LRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
Query: 512 EVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+ +MAPE + +Y+++SDV+S+G+LL EI +
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 360 NMLGQGGFGPV---YKGVLSD--GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVK 414
+ LG+G FG V L D G +AVK+L +F E+ ++ L +VK
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 415 LLGFCV-DGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
G G + L LV E++P+ L L R R L S+ + + I KG+ YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 131
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYA 530
SR R +HRDL A N+L++ + + KI+DFG+A++ + + R G + APE
Sbjct: 132 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESL 189
Query: 531 MEGLYSIKSDVFSFGVLLIEIIT 553
+ ++S +SDV+SFGV+L E+ T
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 362 LGQGGFGPVYKGVLSDG-----------KEIAVKRLSS-CSEQGNAEFTNEVLLILKL-Q 408
LG+G FG V VL++ ++AVK L S +E+ ++ +E+ ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKR 455
HKN++ LLG C ++ E+ +L L R GL L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
++ + +G+ YL + + IHRDL A NVL+ D KI+DFG+AR + T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVLL EI T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 360 NMLGQGGFGPV---YKGVLSD--GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVK 414
+ LG+G FG V L D G +AVK+L +F E+ ++ L +VK
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 415 LLGFCV-DGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
G G + L LV E++P+ L L R R L S+ + + I KG+ YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 132
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYA 530
SR R +HRDL A N+L++ + + KI+DFG+A++ + + R G + APE
Sbjct: 133 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESL 190
Query: 531 MEGLYSIKSDVFSFGVLLIEIIT 553
+ ++S +SDV+SFGV+L E+ T
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V G ++A+K + S EF E +++ L H+ LV+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
++ E+M N L L + R R + + + + + + YL + +HRD
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHRD 145
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDV 541
L A N L++ K+SDFG++R E E ++ + PE M +S KSD+
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDE-ETSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 542 FSFGVLLIEIIT 553
++FGVL+ EI +
Sbjct: 205 WAFGVLMWEIYS 216
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 356 FSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFT--NEVLLILKLQHKNLV 413
F+ +G+G FG V+KG+ + +++ ++ E + E+ ++ + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 414 KLLGFCVDGDEKLLVYEFMPN-SSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
K G + G + ++ E++ S+LD + P + ++ I+KG+ YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA-----TMLKEILKGLDYLHSE 139
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
+ IHRD+KA+NVLL + K++DFG+A ++ + NT VGT +MAPE +
Sbjct: 140 KK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQ 194
Query: 533 GLYSIKSDVFSFGVLLIEIITGR 555
Y K+D++S G+ IE+ G
Sbjct: 195 SAYDSKADIWSLGITAIELAKGE 217
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 348 TLDVATSNFSDSNMLGQGGFGPVYKG-VLSDGKEI--AVKRLSS-CSEQGNAEFTNEVLL 403
LD F D ++G+G FG V K + DG + A+KR+ S+ + +F E+ +
Sbjct: 11 VLDWNDIKFQD--VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 404 ILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR-------------KRGL 449
+ KL H N++ LLG C L E+ P+ +L L R
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
L + ++ + +G+ YL S+ + IHRDL A N+L+ + KI+DFG++R G
Sbjct: 129 LSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQ 182
Query: 510 EGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAP 569
E V +MA E +Y+ SDV+S+GVLL EI++ G G T
Sbjct: 183 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LGGTPYCGMTCA 238
Query: 570 NLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
L + +G L+ PL D DE + C +E ++RP+ + ++V L
Sbjct: 239 EL----YEKLPQGYRLE--KPLNCD----DEVYDLMR---QCWREKPYERPSFAQILVSL 285
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 106/218 (48%), Gaps = 36/218 (16%)
Query: 361 MLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNE--VLLILKLQHKNLVKLL-- 416
++G+G +G VYKG L D + +AVK S + Q F NE + + ++H N+ + +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVG 75
Query: 417 --GFCVDGD-EKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED- 472
DG E LLV E+ PN SL L W + + + +G+ YLH +
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLHTEL 131
Query: 473 -----SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE----GEVNTARI--VGT 521
+ I HRDL + NVL+ D ISDFG++ G+ GE + A I VGT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 522 YGYMAPEYAMEGLYSIKS--------DVFSFGVLLIEI 551
YMAPE +EG +++ D+++ G++ EI
Sbjct: 192 IRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 360 NMLGQGGFGPV---YKGVLSD--GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVK 414
+ LG+G FG V L D G +AVK+L +F E+ ++ L +VK
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 415 LLGFCV-DGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
G G + L LV E++P+ L L R R L S+ + + I KG+ YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYA 530
SR R +HRDL A N+L++ + + KI+DFG+A++ + + R G + APE
Sbjct: 145 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESL 202
Query: 531 MEGLYSIKSDVFSFGVLLIEIIT 553
+ ++S +SDV+SFGV+L E+ T
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 362 LGQGGFGPVYKGVLSD-GKEIAVKRL-SSCSEQGNAEFTNEVLLILKLQHKNLVKL---- 415
LG GGFG V + + D G+++A+K+ S + + E+ ++ KL H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 416 --LGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L D LL E+ L L L +++ I + YLHE+
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN- 141
Query: 474 RLRIIHRDLKASNVLLD---YDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
RIIHRDLK N++L + KI D G A+ +GE+ T VGT Y+APE
Sbjct: 142 --RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTE-FVGTLQYLAPELL 196
Query: 531 MEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWH 577
+ Y++ D +SFG L E ITG R PN WH
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFR---------PFLPNWQPVQWH 234
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 348 TLDVATSNFSDSNMLGQGGFGPVYKG-VLSDGKEI--AVKRLSS-CSEQGNAEFTNEVLL 403
LD F D ++G+G FG V K + DG + A+KR+ S+ + +F E+ +
Sbjct: 21 VLDWNDIKFQD--VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 404 ILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR-------------KRGL 449
+ KL H N++ LLG C L E+ P+ +L L R
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
L + ++ + +G+ YL S+ + IHRDL A N+L+ + KI+DFG++R G
Sbjct: 139 LSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQ 192
Query: 510 EGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAP 569
E V +MA E +Y+ SDV+S+GVLL EI++ G G T
Sbjct: 193 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LGGTPYCGMTCA 248
Query: 570 NLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
L + +G L+ PL D DE + C +E ++RP+ + ++V L
Sbjct: 249 EL----YEKLPQGYRLE--KPLNCD----DEVYDLMR---QCWREKPYERPSFAQILVSL 295
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 360 NMLGQGGFGPV---YKGVLSD--GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVK 414
+ LG+G FG V L D G +AVK+L +F E+ ++ L +VK
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 415 LLG--FCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
G + E LV E++P+ L L R R L S+ + + I KG+ YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 128
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYA 530
SR R +HRDL A N+L++ + + KI+DFG+A++ + + R G + APE
Sbjct: 129 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDXXVVREPGQSPIFWYAPESL 186
Query: 531 MEGLYSIKSDVFSFGVLLIEIIT 553
+ ++S +SDV+SFGV+L E+ T
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 362 LGQGGFGPVYKGVLSD-GKEIAVKRL-SSCSEQGNAEFTNEVLLILKLQHKNLVKL---- 415
LG GGFG V + + D G+++A+K+ S + + E+ ++ KL H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 416 --LGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L D LL E+ L L L +++ I + YLHE+
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN- 140
Query: 474 RLRIIHRDLKASNVLLD---YDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
RIIHRDLK N++L + KI D G A+ +GE+ T VGT Y+APE
Sbjct: 141 --RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTE-FVGTLQYLAPELL 195
Query: 531 MEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWH 577
+ Y++ D +SFG L E ITG R PN WH
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFR---------PFLPNWQPVQWH 233
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 362 LGQGGFGPVYKGVLSDG-----------KEIAVKRLSS-CSEQGNAEFTNEVLLILKL-Q 408
LG+G FG V VL++ ++AVK L S +E+ ++ +E+ ++ + +
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-LCWSKR------------ 455
HKN++ LLG C ++ E+ +L L R GL C++
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
++ + +G+ YL + + IHRDL A NVL+ D KI+DFG+AR + T
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVLL EI T
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 17/232 (7%)
Query: 329 HVRGRDDDLKA-QDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLS 387
HV + LK D +D T+ + LG+GGF Y+ D KE+ ++
Sbjct: 20 HVDPKSAPLKEIPDVLVDPRTM----KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 388 SCS----EQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD 443
S + + E+ + L + ++V GF D D +V E SL +
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELH-- 133
Query: 444 PRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMA 503
++R + + + ++G+ YLH + R+IHRDLK N+ L+ DM+ KI DFG+A
Sbjct: 134 -KRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
Query: 504 RIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
+GE + GT Y+APE + +S + D++S G +L ++ G+
Sbjct: 190 TKIE-FDGE-RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 17/197 (8%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V G ++A+K + S EF E +++ L H+ LV+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
++ E+M N L L + R R + + + + + + YL + +HRD
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHRD 130
Query: 482 LKASNVLLDYDMNPKISDFGMARI-----FAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
L A N L++ K+SDFG++R + S G R + PE M +S
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR------WSPPEVLMYSKFS 184
Query: 537 IKSDVFSFGVLLIEIIT 553
KSD+++FGVL+ EI +
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 362 LGQGGFGPVYKGVLSDG-----------KEIAVKRLSS-CSEQGNAEFTNEVLLILKL-Q 408
LG+G FG V VL++ ++AVK L S +E+ ++ +E+ ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-LCWSKR------------ 455
HKN++ LLG C ++ E+ +L L R GL C++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
++ + +G+ YL + + IHRDL A NVL+ D KI+DFG+AR + T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVLL EI T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 17/232 (7%)
Query: 329 HVRGRDDDLKA-QDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLS 387
HV + LK D +D T+ + LG+GGF Y+ D KE+ ++
Sbjct: 20 HVDPKSAPLKEIPDVLVDPRTM----KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 388 SCS----EQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD 443
S + + E+ + L + ++V GF D D +V E SL +
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELH-- 133
Query: 444 PRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMA 503
++R + + + ++G+ YLH + R+IHRDLK N+ L+ DM+ KI DFG+A
Sbjct: 134 -KRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
Query: 504 RIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
+GE + GT Y+APE + +S + D++S G +L ++ G+
Sbjct: 190 TKIE-FDGERKKT-LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 362 LGQGGFGPVYKGVLSDG-----------KEIAVKRLSS-CSEQGNAEFTNEVLLILKL-Q 408
LG+G FG V VL++ ++AVK L S +E+ ++ +E+ ++ + +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKR 455
HKN++ LLG C ++ E+ +L L R GL L
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
++ + +G+ YL + + IHRDL A NVL+ D KI+DFG+AR + T
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVLL EI T
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 362 LGQGGFGPVYKGVLSDG-----------KEIAVKRLSS-CSEQGNAEFTNEVLLILKL-Q 408
LG+G FG V VL++ ++AVK L S +E+ ++ +E+ ++ + +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKR 455
HKN++ LLG C ++ E+ +L L R GL L
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
++ + +G+ YL + + IHRDL A NVL+ D KI+DFG+AR + T
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVLL EI T
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 13/203 (6%)
Query: 356 FSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLV 413
F+ +G+G FG V+KG+ + K +A+K + +E + E+ ++ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 414 KLLGFCVDGDEKLLVYEFMPN-SSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
K G + + ++ E++ S+LD L +P G L ++ I+ I+KG+ YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GPLDETQIATILREILKGLDYLHSE 123
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
+ IHRD+KA+NVLL K++DFG+A ++ + NT VGT +MAPE +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQ 178
Query: 533 GLYSIKSDVFSFGVLLIEIITGR 555
Y K+D++S G+ IE+ G
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 362 LGQGGFGPVYKGVLSDG-----------KEIAVKRLSS-CSEQGNAEFTNEVLLILKL-Q 408
LG+G FG V VL++ ++AVK L S +E+ ++ +E+ ++ + +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKR 455
HKN++ LLG C ++ E+ +L L R GL L
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
++ + +G+ YL + + IHRDL A NVL+ D KI+DFG+AR + T
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVLL EI T
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 362 LGQGGFGPVYKGVLSDG-----------KEIAVKRLSS-CSEQGNAEFTNEVLLILKL-Q 408
LG+G FG V VL++ ++AVK L S +E+ ++ +E+ ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKR 455
HKN++ LLG C ++ E+ +L L R GL L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
++ + +G+ YL + + IHRDL A NVL+ D KI+DFG+AR + T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVLL EI T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 16/243 (6%)
Query: 311 QIQLHKIGDASKTGLRYQHVRGRDDDLKAQD-FYIDLETLDVATSNFSDSNMLGQGGFGP 369
Q+ H DA R + + + AQD FY L++ + +G+G FG
Sbjct: 151 QLVEHYTTDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQT--IGKGEFGD 208
Query: 370 VYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKL-LV 428
V G G ++AVK + + + F E ++ +L+H NLV+LLG V+ L +V
Sbjct: 209 VMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 429 YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVL 488
E+M SL L R R +L + + + + YL ++ +HRDL A NVL
Sbjct: 266 TEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVL 321
Query: 489 LDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLL 548
+ D K+SDFG+ + + ++ +T ++ + APE E +S KSDV+SFG+LL
Sbjct: 322 VSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSDVWSFGILL 376
Query: 549 IEI 551
EI
Sbjct: 377 WEI 379
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKL 407
V NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIV 459
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF--------- 114
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V
Sbjct: 115 -QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV 169
Query: 520 GTYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 170 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TL 167
Query: 523 GYMAPEYAM-EGLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 17/232 (7%)
Query: 329 HVRGRDDDLKA-QDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLS 387
HV + LK D +D T+ + LG+GGF Y+ D KE+ ++
Sbjct: 20 HVDPKSAPLKEIPDVLVDPRTM----KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 388 SCS----EQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD 443
S + + E+ + L + ++V GF D D +V E SL +
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELH-- 133
Query: 444 PRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMA 503
++R + + + ++G+ YLH + R+IHRDLK N+ L+ DM+ KI DFG+A
Sbjct: 134 -KRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
Query: 504 RIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
+GE + GT Y+APE + +S + D++S G +L ++ G+
Sbjct: 190 TKIE-FDGE-RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 40/236 (16%)
Query: 327 YQHVRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQ-GGFGPVYKGVLSDGKEIAV-- 383
Y+HV DL +DF+ ++G+ G FG VYK + KE +V
Sbjct: 1 YEHVTR---DLNPEDFW----------------EIIGELGDFGKVYK---AQNKETSVLA 38
Query: 384 --KRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 441
K + + SE+ ++ E+ ++ H N+VKLL + ++ EF ++DA++
Sbjct: 39 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 98
Query: 442 FDPRKRGLLCWSKRINIV-NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDF 500
+ +R L +I +V + + YLH++ +IIHRDLKA N+L D + K++DF
Sbjct: 99 LE-LERPLT--ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADF 152
Query: 501 GMARIFAGSEGEVNTARIVGTYGYMAPEYAM-----EGLYSIKSDVFSFGVLLIEI 551
G++ + + + +GT +MAPE M + Y K+DV+S G+ LIE+
Sbjct: 153 GVSAKNTRTXIQRRDS-FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 362 LGQGGFGPVYKGVLSDG-----------KEIAVKRLSS-CSEQGNAEFTNEVLLILKL-Q 408
LG+G FG V VL++ ++AVK L S +E+ ++ +E+ ++ + +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKR 455
HKN++ LLG C ++ E+ +L L R GL L
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
++ + +G+ YL + + IHRDL A NVL+ D KI+DFG+AR + T
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVLL EI T
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 411 NLVKLLGFCVDGDEKLLVYE--------FMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+E FM S+L I K L +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLF----------QL 111
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TL 166
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 22/226 (9%)
Query: 336 DLKAQDFY---IDLETLDVATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLS-SCS 390
DL ++ Y +D E L F+ +G+G FG V+KG+ + K +A+K + +
Sbjct: 12 DLGTENLYFQSMDPEEL------FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA 65
Query: 391 EQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPN-SSLDAILFDPRKRGL 449
E + E+ ++ + + K G + + ++ E++ S+LD L +P G
Sbjct: 66 EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GP 120
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
L ++ I+ I+KG+ YLH + + IHRD+KA+NVLL K++DFG+A +
Sbjct: 121 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 177
Query: 510 EGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
+ + NT VGT +MAPE + Y K+D++S G+ IE+ G
Sbjct: 178 QIKRNT--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 111
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TL 166
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 360 NMLGQGGFGPVYKGVL-SDGKEIAVKRLSSCSEQG----NAEFTNEVLLILKLQHKNLVK 414
+G+G FG V+ G L +D +AVK SC E A+F E ++ + H N+V+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVK---SCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L+G C +V E + D + F + L + +V G+ YL
Sbjct: 177 LIGVCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC- 233
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMAR-----IFAGSEGEVNTARIVGTYGYMAPEY 529
IHRDL A N L+ KISDFGM+R ++A S G + APE
Sbjct: 234 --CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVP-----VKWTAPEA 286
Query: 530 AMEGLYSIKSDVFSFGVLLIEIIT 553
G YS +SDV+SFG+LL E +
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 28/262 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V G ++A+K + S EF E +++ L H+ LV+L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
++ E+M N L L + R R + + + + + + YL + +HRD
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHRD 129
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAMEGLYSIKS 539
L A N L++ K+SDFG++R E T+ + + + PE M +S KS
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
D+++FGVL+ EI + + + TA ++ L L P L
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHI----------AQGLRLYRPHLASE---- 232
Query: 600 EFLRYIHIGLLCVQEDAFDRPT 621
+ I C E A +RPT
Sbjct: 233 ---KVYTIMYSCWHEKADERPT 251
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 13/191 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
+G+G FG V G G ++AVK + + + F E ++ +L+H NLV+LLG V+
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
L +V E+M SL L R R +L + + + + YL ++ +HR
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSD 540
DL A NVL+ D K+SDFG+ + + ++ +T ++ + APE E +S KSD
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREAAFSTKSD 187
Query: 541 VFSFGVLLIEI 551
V+SFG+LL EI
Sbjct: 188 VWSFGILLWEI 198
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 23/246 (9%)
Query: 335 DDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK---EIAVKRLSSCSE 391
++LK + ++ + L +A LG G FG V +GV K ++A+K L +E
Sbjct: 323 EELKDKKLFLKRDNLLIADIE------LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE 376
Query: 392 QGNAE-FTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLL 450
+ + E E ++ +L + +V+L+G C + +LV E L L KR +
Sbjct: 377 KADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEI 433
Query: 451 CWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE 510
S +++ + G+ YL E + +HR+L A NVLL KISDFG+++ G++
Sbjct: 434 PVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKAL-GAD 489
Query: 511 GEVNTARIVGTY--GYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATA 568
TAR G + + APE +S +SDV+S+GV + E ++ G +
Sbjct: 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS----YGQKPYKKMKG 545
Query: 569 PNLLAY 574
P ++A+
Sbjct: 546 PEVMAF 551
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 111
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV- 166
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 17/219 (7%)
Query: 362 LGQGGFGPVYKGVLSDGK---EIAVKRLSSCSEQGNAE-FTNEVLLILKLQHKNLVKLLG 417
LG G FG V +GV K ++A+K L +E+ + E E ++ +L + +V+L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 418 FCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRI 477
C + +LV E L L KR + S +++ + G+ YL E +
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---F 131
Query: 478 IHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLY 535
+HRDL A NVLL KISDFG+++ G++ TAR G + + APE +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKAL-GADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 536 SIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAY 574
S +SDV+S+GV + E ++ G + P ++A+
Sbjct: 191 SSRSDVWSYGVTMWEALS----YGQKPYKKMKGPEVMAF 225
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 348 TLDVATSNFSDSNMLGQGGFGPVYKG-VLSDGKEI--AVKRLSS-CSEQGNAEFTNEVLL 403
LD F D ++G+G FG V K + DG + A+KR+ S+ + +F E+ +
Sbjct: 18 VLDWNDIKFQD--VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 404 ILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPR-------------KRGL 449
+ KL H N++ LLG C L E+ P+ +L L R
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
L + ++ + +G+ YL S+ + IHR+L A N+L+ + KI+DFG++R G
Sbjct: 136 LSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQ 189
Query: 510 EGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAP 569
E V +MA E +Y+ SDV+S+GVLL EI++ G G T
Sbjct: 190 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LGGTPYCGMTCA 245
Query: 570 NLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVML 629
L + +G L+ PL D DE + C +E ++RP+ + ++V L
Sbjct: 246 EL----YEKLPQGYRLE--KPLNCD----DEVYDLMR---QCWREKPYERPSFAQILVSL 292
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 28/262 (10%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V G ++A+K + S EF E +++ L H+ LV+L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
++ E+M N L L + R R + + + + + + YL + +HRD
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHRD 125
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAMEGLYSIKS 539
L A N L++ K+SDFG++R E T+ + + + PE M +S KS
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 540 DVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPD 599
D+++FGVL+ EI + + + TA ++ L L P L
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHI----------AQGLRLYRPHLASE---- 228
Query: 600 EFLRYIHIGLLCVQEDAFDRPT 621
+ I C E A +RPT
Sbjct: 229 ---KVYTIMYSCWHEKADERPT 247
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TL 167
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 111
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TL 166
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 119
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V T
Sbjct: 120 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TL 174
Query: 523 GYMAPEYAM-EGLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL FC DEKL + N L + RK G + IV + Y
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 152
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 153 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TL 167
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 361 MLGQGGFGPVYKGVLSDGKEIAVKRLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+GGF ++ +D KE+ ++ S + + E+ + L H+++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
GF D D +V E SL + ++R L + + IV G YLH R R
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLH---RNR 141
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
+IHRDLK N+ L+ D+ KI DFG+A +GE + GT Y+APE + +S
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGE-RKKTLCGTPNYIAPEVLSKKGHS 199
Query: 537 IKSDVFSFGVLLIEIITGR 555
+ DV+S G ++ ++ G+
Sbjct: 200 FEVDVWSIGCIMYTLLVGK 218
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V G ++A+K + S EF E +++ L H+ LV+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
++ E+M N L L + R R + + + + + + YL + +HRD
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHRD 145
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAMEGLYSIKS 539
L A N L++ K+SDFG++R E T+ + + + PE M +S KS
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 540 DVFSFGVLLIEIIT 553
D+++FGVL+ EI +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 361 MLGQGGFGPVYKGVLSDGKEIAVKRLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+GGF ++ +D KE+ ++ S + + E+ + L H+++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
GF D D +V E SL + ++R L + + IV G YLH R R
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLH---RNR 159
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARI--FAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
+IHRDLK N+ L+ D+ KI DFG+A + G +V + GT Y+APE +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV----LCGTPNYIAPEVLSKKG 215
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
+S + DV+S G ++ ++ G+
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGK 236
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V G ++A+K + S EF E +++ L H+ LV+L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
++ E+M N L L + R R + + + + + + YL + +HRD
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHRD 136
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAMEGLYSIKS 539
L A N L++ K+SDFG++R E T+ + + + PE M +S KS
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 540 DVFSFGVLLIEI 551
D+++FGVL+ EI
Sbjct: 194 DIWAFGVLMWEI 205
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 361 MLGQGGFGPVYKGVLSDGKEIAVKRLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+GGF ++ +D KE+ ++ S + + E+ + L H+++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
GF D D +V E SL + ++R L + + IV G YLH R R
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLH---RNR 161
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARI--FAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
+IHRDLK N+ L+ D+ KI DFG+A + G +V + GT Y+APE +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV----LCGTPNYIAPEVLSKKG 217
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
+S + DV+S G ++ ++ G+
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGK 238
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
LG G FG V G ++A+K + S EF E +++ L H+ LV+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRD 481
++ E+M N L L + R R + + + + + + YL + +HRD
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHRD 130
Query: 482 LKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG--YMAPEYAMEGLYSIKS 539
L A N L++ K+SDFG++R E T+ + + + PE M +S KS
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 540 DVFSFGVLLIEI 551
D+++FGVL+ EI
Sbjct: 188 DIWAFGVLMWEI 199
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 361 MLGQGGFGPVYKGVLSDGKEIAVKRLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+GGF ++ +D KE+ ++ S + + E+ + L H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
GF D D +V E SL + ++R L + + IV G YLH R R
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLH---RNR 137
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
+IHRDLK N+ L+ D+ KI DFG+A +GE + GT Y+APE + +S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGE-RKKTLCGTPNYIAPEVLSKKGHS 195
Query: 537 IKSDVFSFGVLLIEIITGR 555
+ DV+S G ++ ++ G+
Sbjct: 196 FEVDVWSIGCIMYTLLVGK 214
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 119
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V T
Sbjct: 120 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TL 174
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 361 MLGQGGFGPVYKGVLSDGKEIAVKRLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+GGF ++ +D KE+ ++ S + + E+ + L H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
GF D D +V E SL + ++R L + + IV G YLH R R
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLH---RNR 137
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
+IHRDLK N+ L+ D+ KI DFG+A +GE + GT Y+APE + +S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGE-RKKTLCGTPNYIAPEVLSKKGHS 195
Query: 537 IKSDVFSFGVLLIEIITGR 555
+ DV+S G ++ ++ G+
Sbjct: 196 FEVDVWSIGCIMYTLLVGK 214
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 360 NMLGQGGFGPVYKGVL-SDGKEIAVKRLSSCSEQG----NAEFTNEVLLILKLQHKNLVK 414
+G+G FG V+ G L +D +AVK SC E A+F E ++ + H N+V+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVK---SCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L+G C +V E + D + F + L + +V G+ YL
Sbjct: 177 LIGVCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC- 233
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IHRDL A N L+ KISDFGM+R A + + APE G
Sbjct: 234 --CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 535 YSIKSDVFSFGVLLIEIIT 553
YS +SDV+SFG+LL E +
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 44/298 (14%)
Query: 360 NMLGQGGFGPVYKGVL--SDGK--EIAVK--RLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
+LG+G FG V +G L DG ++AVK +L + S++ EF +E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 414 KLLGFCVDGDEK-----LLVYEFMPNSSLDAILFDPRKR---GLLCWSKRINIVNGIVKG 465
+LLG C++ + +++ FM L L R + + + I G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMA-RIFAG---SEGEVNTARIVGT 521
+ YL S +HRDL A N +L DM ++DFG++ +I++G +G + +
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV--- 213
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNE 581
++A E + +Y+ KSDV++FGV + EI T G G + Y H
Sbjct: 214 -KWIAIESLADRVYTSKSDVWAFGVTMWEIAT----RGMTPYPGVQNHEMYDYLLHGHRL 268
Query: 582 GNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSVVVMLQGETITLCQP 639
D +D L S C + D DRPT S V+ LQ E + P
Sbjct: 269 KQPEDCLDELYEIMYS-------------CWRTDPLDRPTFS--VLRLQLEKLLESLP 311
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 13/191 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
+G+G FG V G G ++AVK + + + F E ++ +L+H NLV+LLG V+
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
L +V E+M SL L R R +L + + + + YL ++ +HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSD 540
DL A NVL+ D K+SDFG+ + + ++ +T ++ + APE E +S KSD
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSD 196
Query: 541 VFSFGVLLIEI 551
V+SFG+LL EI
Sbjct: 197 VWSFGILLWEI 207
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 361 MLGQGGFGPVYKGVLSDGKEIAVKRLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+GGF ++ +D KE+ ++ S + + E+ + L H+++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
GF D D +V E SL + ++R L + + IV G YLH R R
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLH---RNR 135
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
+IHRDLK N+ L+ D+ KI DFG+A +GE + GT Y+APE + +S
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKV-LCGTPNYIAPEVLSKKGHS 193
Query: 537 IKSDVFSFGVLLIEIITGR 555
+ DV+S G ++ ++ G+
Sbjct: 194 FEVDVWSIGCIMYTLLVGK 212
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V T
Sbjct: 113 LQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TL 167
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ E+ +L L R G+ + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + NT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 18/223 (8%)
Query: 344 IDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLL 403
IDL L F ++G G +G VYKG ++A ++ + E E+ +
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM 73
Query: 404 ILKL-QHKNLVKLLGFCVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRI 456
+ K H+N+ G + D+ LV EF S+ ++ + K L
Sbjct: 74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIA 132
Query: 457 NIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA 516
I I++G+ +LH+ ++IHRD+K NVLL + K+ DFG++ + G NT
Sbjct: 133 YICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT- 188
Query: 517 RIVGTYGYMAPEYAM-----EGLYSIKSDVFSFGVLLIEIITG 554
+GT +MAPE + Y KSD++S G+ IE+ G
Sbjct: 189 -FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 13/191 (6%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
+G+G FG V G G ++AVK + + + F E ++ +L+H NLV+LLG V+
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 422 GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
L +V E+M SL L R R +L + + + + YL ++ +HR
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 481 DLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSD 540
DL A NVL+ D K+SDFG+ + + ++ +T ++ + APE E +S KSD
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSD 181
Query: 541 VFSFGVLLIEI 551
V+SFG+LL EI
Sbjct: 182 VWSFGILLWEI 192
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 356 FSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLV 413
F+ +G+G FG V+KG+ + K +A+K + +E + E+ ++ + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 414 KLLGFCVDGDEKLLVYEFMPN-SSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
K G + + ++ E++ S+LD L +P G L ++ I+ I+KG+ YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GPLDETQIATILREILKGLDYLHSE 138
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
+ IHRD+KA+NVLL K++DFG+A ++ ++ VGT +MAPE +
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 533 GLYSIKSDVFSFGVLLIEIITGR 555
Y K+D++S G+ IE+ G
Sbjct: 194 SAYDSKADIWSLGITAIELARGE 216
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 102/206 (49%), Gaps = 26/206 (12%)
Query: 362 LGQGGFG--------PVYKGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKLQHKNL 412
LG+G FG P G G+ +AVK L + Q + + E+ ++ L H+++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 413 VKLLGFCVD-GDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+K G C D G L LV E++P SL L PR + ++ + I +G+ YLH
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHS--IGLAQLLLFAQQICEGMAYLH 151
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG-EVNTARIVG--TYGYMAP 527
IHRDL A NVLLD D KI DFG+A+ A EG E R G + AP
Sbjct: 152 AQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEXYRVREDGDSPVFWYAP 206
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIIT 553
E E + SDV+SFGV L E++T
Sbjct: 207 ECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 16/219 (7%)
Query: 341 DFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCS----EQGNAE 396
D +D T+ + LG+GGF Y+ D KE+ ++ S +
Sbjct: 17 DVLVDPRTM----KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK 72
Query: 397 FTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRI 456
+ E+ + L + ++V GF D D +V E SL + ++R + +
Sbjct: 73 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELH---KRRKAVTEPEAR 129
Query: 457 NIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA 516
+ ++G+ YLH + R+IHRDLK N+ L+ DM+ KI DFG+A +GE
Sbjct: 130 YFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGE-RKK 184
Query: 517 RIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
+ GT Y+APE + +S + D++S G +L ++ G+
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ E+ +L L R G+ + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 103/235 (43%), Gaps = 31/235 (13%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKG-VLSDGKE-----IAVKRLSSCSEQGNAE-FTN 399
E + +N LG G FG V + GKE +AVK L S + E +
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 400 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEF----------------MPNSSL----D 438
E+ ++ L QH+N+V LLG C G L++ E+ M SL D
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 439 AILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKIS 498
D L ++ + + +G+ +L + IHRD+ A NVLL KI
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIG 200
Query: 499 DFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
DFG+AR + +MAPE + +Y+++SDV+S+G+LL EI +
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 356 FSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKNLV 413
F+ +G+G FG V+KG+ + K +A+K + +E + E+ ++ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 414 KLLGFCVDGDEKLLVYEFMPN-SSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
K G + + ++ E++ S+LD L +P G L ++ I+ I+KG+ YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GPLDETQIATILREILKGLDYLHSE 123
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
+ IHRD+KA+NVLL K++DFG+A ++ ++ VGT +MAPE +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 533 GLYSIKSDVFSFGVLLIEIITGR 555
Y K+D++S G+ IE+ G
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ E+ +L L R G+ + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 360 NMLGQGGFGPVYKGVLSDGKE----IAVKRLSSCSEQGNAE-FTNEVLLILKLQHKNLVK 414
++G+G FG VY G D + A+K LS +E E F E LL+ L H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 415 LLGFCV--DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
L+G + +G +L+ +M + L + P++ + I+ + +G+ YL E
Sbjct: 87 LIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVARGMEYLAEQ 143
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE----GEVNTARIVGTYGYMAPE 528
+ +HRDL A N +LD K++DFG+AR E + AR+ + A E
Sbjct: 144 ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PVKWTALE 198
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIIT 553
++ KSDV+SFGVLL E++T
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 21/221 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK--RLSSCSEQGNAEFTNEVLLILKL 407
+ATS + +G G +G VYK G +A+K R+ + E EV L+ +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 408 Q---HKNLVKLLGFCV----DGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV 459
+ H N+V+L+ C D + K+ LV+E + + L L GL + + +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK-DLM 118
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
++G+ +LH + I+HRDLK N+L+ K++DFG+ARI++ ++ A +V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALAPVV 172
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGF 560
T Y APE ++ Y+ D++S G + E+ RR F
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLF 211
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 127/288 (44%), Gaps = 40/288 (13%)
Query: 362 LGQGGFGPVY---KGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
LG G +G V V + I + R +S S N++ EV ++ L H N++KL F
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 419 CVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRI 477
D LV E L D I+ R I+ ++ G+ YLH+ + I
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKHN---I 157
Query: 478 IHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
+HRDLK N+LL + D KI DFG++ +F E + +GT Y+APE +
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAPE-VLRKK 213
Query: 535 YSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLL-----------AYAWHLWNEGN 583
Y K DV+S GV+L ++ G G G T +L + W +EG
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPFG-----GQTDQEILRKVEKGKYTFDSPEWKNVSEG- 267
Query: 584 ALDLIDPLL----TDTCSPDEFLRYIHIGLLCV-QEDAFDRPTMSSVV 626
A DLI +L S + L + I +C +E + P++++ +
Sbjct: 268 AKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAI 315
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 25/238 (10%)
Query: 332 GRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVL--SDGK--EIAVKRLS 387
G D+LK + LE + + F+ MLG+G FG V + L DG ++AVK L
Sbjct: 6 GISDELKEK-----LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK 60
Query: 388 S--CSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEK------LLVYEFMPNSSLDA 439
+ + EF E + + H ++ KL+G + K +++ FM + L A
Sbjct: 61 ADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHA 120
Query: 440 ILFDPR---KRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPK 496
L R L + + I G+ YL S IHRDL A N +L DM
Sbjct: 121 FLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVC 177
Query: 497 ISDFGMAR-IFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
++DFG++R I++G A + ++A E + LY++ SDV++FGV + EI+T
Sbjct: 178 VADFGLSRKIYSGDYYRQGCASKLPV-KWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 140/298 (46%), Gaps = 35/298 (11%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF---- 418
+G FG V+K L + + +AVK + ++ + + EV + ++H+N+++ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVK-IFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 419 -CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED----- 472
VD D L+ F SL L K ++ W++ +I + +G+ YLHED
Sbjct: 91 TSVDVD-LWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 473 --SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
+ I HRD+K+ NVLL ++ I+DFG+A F + +T VGT YMAPE
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-V 204
Query: 531 MEGLYSIKSDVF------SFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNEGNA 584
+EG + + D F + G++L E+ + R T + G +L + + +
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELAS--RCTAAD---GPVDEYMLPFEEEIGQHPSL 259
Query: 585 LDLIDPLLTDTCSP---DEFLRYIHIGLLC-VQEDAFDRPTMSSVVVMLQGETITLCQ 638
D+ + ++ P D + ++ + +LC E+ +D + + GE IT Q
Sbjct: 260 EDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 32/218 (14%)
Query: 362 LGQGGFGPVYKGVLSDG-----------KEIAVKRLSS-CSEQGNAEFTNEVLLILKL-Q 408
LG+G FG V VL++ ++AVK L S +E+ ++ +E+ ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKR 455
HKN++ LLG C ++ E+ +L L GL L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
++ + +G+ YL + + IHRDL A NVL+ D KI+DFG+AR + T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVLL EI T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAE--FTNEVLLILKLQ 408
+ + + ++G+G +G V K D G+ +A+K+ + + E+ L+ +L+
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRI-NIVNGIVKGIL 467
H+NLV LL C LV+EF+ ++ LD + P K + I+NGI G
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGI--GFC 140
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+ H IIHRD+K N+L+ K+ DFG AR A GEV V T Y AP
Sbjct: 141 HSH-----NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP-GEVYDDE-VATRWYRAP 193
Query: 528 EYAMEGL-YSIKSDVFSFGVLLIEIITG 554
E + + Y DV++ G L+ E+ G
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS----CSEQGNAEFTNEVLLIL 405
+ NF +LG+G FG V V G AVK L + T + +L L
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 406 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKG 465
H L +L D V EF+ L +F +K ++ I+
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEIISA 136
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYM 525
+++LH+ II+RDLK NVLLD++ + K++DFGM + G V TA GT Y+
Sbjct: 137 LMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYI 191
Query: 526 APEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
APE E LY D ++ GVLL E++ G
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 110
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 165
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 110
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 165
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 110
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 165
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK-----RGLLCWSKRINIVNG 461
LLG C G +++ EF +L L F P K + L I
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
+ KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 110
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 165
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 112
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 167
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 113
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 168
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 112
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 167
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLF---------- 113
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 168
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 111
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TL 166
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
VKL F DEKL Y + + +L RK G + IV + YL
Sbjct: 92 PFFVKLY-FTFQDDEKL--YFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 530 AMEGLYSIKSDVFSFGVLLIEIITG 554
E S SD+++ G ++ +++ G
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLF---------- 113
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 168
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 111
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 166
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 111
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 166
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLF---------- 110
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 165
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 112
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 167
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLF---------- 112
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 167
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF---------- 113
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 168
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+ RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 112
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TL 167
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+ RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 111
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G T +V T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TL 166
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 111
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TL 166
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHK 410
NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 411 NLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
N+VKLL ++ LV+EF M S+L I K L +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----------QL 113
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V T
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TL 168
Query: 523 GYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
Y APE + YS D++S G + E++T R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 409 HKNLVKLLGFCVDGDEKLLVYE--------FMPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+E FM S+L I K L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLF---------- 113
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 168
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 114
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 115 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 169
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF---------- 113
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 168
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQ 408
+ NF +G+G +G VYK G+ +A+K RL + +E + E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 409 HKNLVKLLGFCVDGDEKLLVYEF--------MPNSSLDAILFDPRKRGLLCWSKRINIVN 460
H N+VKLL ++ LV+EF M S+L I K L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF---------- 111
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+++G+ + H R++HRDLK N+L++ + K++DFG+AR F G +V
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV- 166
Query: 521 TYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
T Y APE + YS D++S G + E++T R
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK---RGLLCWSKRINIVNGIV 463
LLG C G +++ EF +L L F P K + L I +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ E+ +L L R G+ + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK---RGLLCWSKRINIVNGIV 463
LLG C G +++ EF +L L F P K + L I +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ E+ +L L R G+ + + ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 362 LGQGGFGPVYKG--VLSDGKEIAVKRLS-SCSEQGNAEFTNEVLLILK----LQHKNLVK 414
+G+G +G V+K + + G+ +A+KR+ E+G T + +L+ +H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 415 LLGFCV----DGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
L C D + KL LV+E + + L L + G+ + + +++ +++G+ +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-DMMFQLLRGLDFL 136
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H R++HRDLK N+L+ K++DFG+ARI++ ++ +V T Y APE
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEV 190
Query: 530 AMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQS 563
++ Y+ D++S G + E+ RR F S
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGS 222
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK------RGLLCWSKRINIVN 460
LLG C G +++ EF +L L F P K + L I
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
+ KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 104/223 (46%), Gaps = 13/223 (5%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYK-GVLSDGKEIAVKRLSSCSEQ---GNAEFTNEV 401
LE V + F +LG+GGFG V V + GK A K+L + G A NE
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 402 LLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
++ K+ + +V L D LV M L ++ + G ++ +
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-EARAVFYAAE 294
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
I G+ LH R RI++RDLK N+LLD + +ISD G+A EG+ R VGT
Sbjct: 295 ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR-VGT 348
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
GYMAPE Y+ D ++ G LL E+I G+ + F Q +
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK 389
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ E+ +L L R G+ + + ++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 70 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 125
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 126 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 53/234 (22%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
+F + ++G GGFG V+K DGK ++R+ +E+ EV + KL H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIV 68
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAIL---FDPR---------------------KRGL 449
G C DG +++ P +S D++ +DP K L
Sbjct: 69 HYNG-CWDG------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 450 LCWSKR-----------INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKIS 498
W ++ + + I KG+ Y+H ++IHRDLK SN+ L KI
Sbjct: 122 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIG 178
Query: 499 DFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEII 552
DFG+ + + R GT YM+PE Y + D+++ G++L E++
Sbjct: 179 DFGLV---TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 69 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 124
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 125 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 362 LGQGGFGPVYKG--VLSDGKEIAVKRLS-SCSEQGNAEFTNEVLLILK----LQHKNLVK 414
+G+G +G V+K + + G+ +A+KR+ E+G T + +L+ +H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 415 LLGFCV----DGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
L C D + KL LV+E + + L L + G+ + + +++ +++G+ +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-DMMFQLLRGLDFL 136
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H R++HRDLK N+L+ K++DFG+ARI++ ++ +V T Y APE
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEV 190
Query: 530 AMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQS 563
++ Y+ D++S G + E+ RR F S
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGS 222
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 104/223 (46%), Gaps = 13/223 (5%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYK-GVLSDGKEIAVKRLSSCSEQ---GNAEFTNEV 401
LE V + F +LG+GGFG V V + GK A K+L + G A NE
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 402 LLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
++ K+ + +V L D LV M L ++ + G ++ +
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-EARAVFYAAE 294
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
I G+ LH R RI++RDLK N+LLD + +ISD G+A EG+ R VGT
Sbjct: 295 ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR-VGT 348
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
GYMAPE Y+ D ++ G LL E+I G+ + F Q +
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK 389
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 362 LGQGGFGPVYKG--VLSDGKEIAVKRLS-SCSEQGNAEFTNEVLLILK----LQHKNLVK 414
+G+G +G V+K + + G+ +A+KR+ E+G T + +L+ +H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 415 LLGFCV----DGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
L C D + KL LV+E + + L L + G+ + + +++ +++G+ +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-DMMFQLLRGLDFL 136
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H R++HRDLK N+L+ K++DFG+ARI++ ++ +V T Y APE
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEV 190
Query: 530 AMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQS 563
++ Y+ D++S G + E+ RR F S
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGS 222
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK-------RGLLCWSKRINIV 459
LLG C G +++ EF +L L F P K + L I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+ KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 19/210 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
+++D+ ++G G FG VY+ L D G+ +A+K++ QG A E+ ++ KL H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 414 KLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+L F EK LV +++P + R + L + + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y A
Sbjct: 137 YIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YRA 190
Query: 527 PEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
PE Y+ DV+S G +L E++ G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 419
+G+G +G VYK + G+ A+K RL E + E+ ++ +L+H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
+LV+E + + L +L D + GL + + ++ ++ GI Y H+ R++H
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQ-LLNGIAYCHDR---RVLH 123
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAM-EGLYSIK 538
RDLK N+L++ + KI+DFG+AR F G T IV T Y AP+ M YS
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTT 181
Query: 539 SDVFSFGVLLIEIITG 554
D++S G + E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK-------RGLLCWSKRINIV 459
LLG C G +++ EF +L L F P K + L I
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+ KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 19/210 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
+++D+ ++G G FG VY+ L D G+ +A+K++ QG A E+ ++ KL H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 414 KLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+L F EK LV +++P + R + L + + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y A
Sbjct: 137 YIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YRA 190
Query: 527 PEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
PE Y+ DV+S G +L E++ G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 147
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 19/210 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
+++D+ ++G G FG VY+ L D G+ +A+K++ QG A E+ ++ KL H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 414 KLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+L F EK LV +++P + R + L + + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y A
Sbjct: 137 YIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YRA 190
Query: 527 PEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
PE Y+ DV+S G +L E++ G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 145
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 68 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 123
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 124 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 145
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGP-VYKGVLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 145
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 148
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ E+ +L L R G+ + + ++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK-------RGLLCWSKRINIV 459
LLG C G +++ EF +L L F P K + L I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+ KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 145
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 148
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ E+ +L L R G+ + + ++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 129
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 130 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 19/208 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKLQ 408
N+ LG+G FG V + G+++A+K L+ QG E E+ + L+
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
H +++KL DE ++V E+ N D I+ +R + + I+ + Y
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 118
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
H R +I+HRDLK N+LLD +N KI+DFG++ I + G+ Y APE
Sbjct: 119 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 172
Query: 529 YAMEGLYS-IKSDVFSFGVLLIEIITGR 555
LY+ + DV+S GV+L ++ R
Sbjct: 173 VISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 147
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 67 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 122
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 123 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 147
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ E+ +L L R G+ + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + +I+DFG+AR + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 147
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 19/208 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKLQ 408
N+ LG+G FG V + G+++A+K L+ QG E E+ + L+
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
H +++KL DE ++V E+ N D I+ +R + + I+ + Y
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 127
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
H R +I+HRDLK N+LLD +N KI+DFG++ I + G+ Y APE
Sbjct: 128 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 181
Query: 529 YAMEGLYS-IKSDVFSFGVLLIEIITGR 555
LY+ + DV+S GV+L ++ R
Sbjct: 182 VISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 144
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ E+ +L L R G+ + + ++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 95 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 150
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 144
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 19/208 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKLQ 408
N+ LG+G FG V + G+++A+K L+ QG E E+ + L+
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
H +++KL DE ++V E+ N D I+ +R + + I+ + Y
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 122
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
H R +I+HRDLK N+LLD +N KI+DFG++ I + G+ Y APE
Sbjct: 123 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 176
Query: 529 YAMEGLYS-IKSDVFSFGVLLIEIITGR 555
LY+ + DV+S GV+L ++ R
Sbjct: 177 VISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ E+ +L L R G+ + + ++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 19/208 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKLQ 408
N+ LG+G FG V + G+++A+K L+ QG E E+ + L+
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 409 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
H +++KL DE ++V E+ N D I+ +R + + I+ + Y
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 128
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
H R +I+HRDLK N+LLD +N KI+DFG++ I + G+ Y APE
Sbjct: 129 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 182
Query: 529 YAMEGLYS-IKSDVFSFGVLLIEIITGR 555
LY+ + DV+S GV+L ++ R
Sbjct: 183 VISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 354 SNFSD----SNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNA---EFTNEVLLIL 405
S+ SD +LG GG V+ L D +++AVK L + + + F E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 406 KLQHKNLVKLL----GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
L H +V + G +V E++ +L I+ G + + I ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIAD 124
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV-NTARIVG 520
+ + + H++ IIHRD+K +N+L+ K+ DFG+AR A S V TA ++G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T Y++PE A +SDV+S G +L E++TG
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 419
+G+G +G VYK + G+ A+K RL E + E+ ++ +L+H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
+LV+E + + L +L D + GL + + ++ ++ GI Y H+ R++H
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQ-LLNGIAYCHDR---RVLH 123
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAM-EGLYSIK 538
RDLK N+L++ + KI+DFG+AR F G T +V T Y AP+ M YS
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 539 SDVFSFGVLLIEIITG 554
D++S G + E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDG 422
+G FG V+K L + + ++ ++ + + E+ ++H+NL++ + G
Sbjct: 24 ARGRFGCVWKAQLMN--DFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 423 D----EKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED------ 472
E L+ F SL L K ++ W++ ++ + +G+ YLHED
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 473 --SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
+ I HRD K+ NVLL D+ ++DFG+A F + +T VGT YMAPE
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-V 196
Query: 531 MEGLYSIKSDVF------SFGVLLIEIIT 553
+EG + + D F + G++L E+++
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVK--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 419
+G+G +G VYK + G+ A+K RL E + E+ ++ +L+H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
+LV+E + + L +L D + GL + + ++ ++ GI Y H+ R++H
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQ-LLNGIAYCHDR---RVLH 123
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAM-EGLYSIK 538
RDLK N+L++ + KI+DFG+AR F G T +V T Y AP+ M YS
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 539 SDVFSFGVLLIEIITG 554
D++S G + E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK-------RGLLCWSKRINIV 459
LLG C G +++ EF +L L F P K + L I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+ KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 21/221 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK--RLSSCSEQGNAEFTNEVLLILKL 407
+ATS + +G G +G VYK G +A+K R+ + E EV L+ +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 408 Q---HKNLVKLLGFCV----DGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV 459
+ H N+V+L+ C D + K+ LV+E + + L L GL + + +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK-DLM 118
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
++G+ +LH + I+HRDLK N+L+ K++DFG+ARI++ ++ +V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVV 172
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGF 560
T Y APE ++ Y+ D++S G + E+ RR F
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLF 211
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSS---CSEQGNAEFTNEVLLILKLQH 409
+F +LG+G F V L+ +E A+K L E T E ++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 410 KNLVKLLGFCVDGDEKLLV-YEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
VKL F DEKL + N L + RK G + IV + Y
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 147
Query: 469 LHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
LH IIHRDLK N+LL+ DM+ +I+DFG A++ + + VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
E SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 341 DFYIDLETLDVATSNFSDSNMLGQGGFGPVYK-GVLSDGKEIAVKRLSSCSEQGNAEFTN 399
D++ID D + F + LG+G VY+ K A+K L ++
Sbjct: 40 DYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR--T 97
Query: 400 EVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINI 458
E+ ++L+L H N++KL E LV E + L D I+ ++G +
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIV----EKGYYSERDAADA 153
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDY---DMNPKISDFGMARIFAGSEGEVNT 515
V I++ + YLHE+ I+HRDLK N+L D KI+DFG+++I E +V
Sbjct: 154 VKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLM 207
Query: 516 ARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG------RRNTGFNQSRGATAP 569
+ GT GY APE Y + D++S G++ ++ G R F R
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE 267
Query: 570 NLLAYAWHLWNEG--NALDLIDPLLT 593
W W+E NA DL+ L+
Sbjct: 268 YYFISPW--WDEVSLNAKDLVRKLIV 291
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 21/221 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK--RLSSCSEQGNAEFTNEVLLILKL 407
+ATS + +G G +G VYK G +A+K R+ + E EV L+ +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 408 Q---HKNLVKLLGFCV----DGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV 459
+ H N+V+L+ C D + K+ LV+E + + L L GL + + +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK-DLM 118
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
++G+ +LH + I+HRDLK N+L+ K++DFG+ARI++ ++ +V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVV 172
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGF 560
T Y APE ++ Y+ D++S G + E+ RR F
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLF 211
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 362 LGQGGFGPVYK-GVLSDGKEIAVKRL--SSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
+G G +G K SDGK + K L S +E +EV L+ +L+H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 419 CVDGDEKLL--VYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIVKGILYLHE--DS 473
+D L V E+ L +++ ++R L + ++ + + H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 474 RLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG 533
++HRDLK +NV LD N K+ DFG+ARI + E VGT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDEDFAKEFVGTPYYMSPEQMNRM 191
Query: 534 LYSIKSDVFSFGVLLIEI 551
Y+ KSD++S G LL E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 362 LGQGGFGPVYK-GVLSDGKEIAVKRL--SSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
+G G +G K SDGK + K L S +E +EV L+ +L+H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 419 CVDGDEKLL--VYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIVKGILYLHE--DS 473
+D L V E+ L +++ ++R L + ++ + + H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 474 RLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG 533
++HRDLK +NV LD N K+ DFG+ARI T VGT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRM 191
Query: 534 LYSIKSDVFSFGVLLIEI 551
Y+ KSD++S G LL E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 99/220 (45%), Gaps = 37/220 (16%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRKRG-------------LLCWS 453
LLG C G +++ EF +L L F P K L+C+S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 454 KRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV 513
++ KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 157 FQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 207
Query: 514 NTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 208 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK-------RGLLCWSKRINIV 459
LLG C G +++ EF +L L F P K + L I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+ KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK-------RGLLCWSKRINIV 459
LLG C G +++ EF +L L F P K + L I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+ KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 354 SNFSD----SNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNA---EFTNEVLLIL 405
S+ SD +LG GG V+ L D +++AVK L + + + F E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 406 KLQHKNLVKLL----GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
L H +V + G +V E++ +L I+ G + + I ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIAD 124
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV-NTARIVG 520
+ + + H++ IIHRD+K +N+++ K+ DFG+AR A S V TA ++G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T Y++PE A +SDV+S G +L E++TG
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 354 SNFSD----SNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNA---EFTNEVLLIL 405
S+ SD +LG GG V+ L D +++AVK L + + + F E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 406 KLQHKNLVKLL----GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
L H +V + G +V E++ +L I+ G + + I ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIAD 124
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV-NTARIVG 520
+ + + H++ IIHRD+K +N+++ K+ DFG+AR A S V TA ++G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T Y++PE A +SDV+S G +L E++TG
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYK-GVLSDGKEIAVKRLSSCSEQGNAEFTNEVL-- 402
LE + F D +LG+GGFG V+ + + GK A K+L+ + + ++
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 403 LILKLQHKNLVKLLGFCVDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKR-INIVN 460
IL H + L + + L LV M + +++ + R I
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
IV G+ +LH+ + II+RDLK NVLLD D N +ISD G+A G+ T G
Sbjct: 297 QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA--GQTKTKGYAG 351
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPN 570
T G+MAPE + Y D F+ GV L E+I R G ++RG N
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFRARGEKVEN 398
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVL-SDGKEIAVKRLSSCSEQGNAEFTNEVL-- 402
LE + F D +LG+GGFG V+ + + GK A K+L+ + + ++
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 403 LILKLQHKNLVKLLGFCVDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKR-INIVN 460
IL H + L + + L LV M + +++ + R I
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
IV G+ +LH+ + II+RDLK NVLLD D N +ISD G+A G+ T G
Sbjct: 297 QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA--GQTKTKGYAG 351
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPN 570
T G+MAPE + Y D F+ GV L E+I R G ++RG N
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFRARGEKVEN 398
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK-------RGLLCWSKRINIV 459
LLG C G +++ EF +L L F P K + L I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+ KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVL-SDGKEIAVKRLSSCSEQGNAEFTNEVL-- 402
LE + F D +LG+GGFG V+ + + GK A K+L+ + + ++
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 403 LILKLQHKNLVKLLGFCVDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKR-INIVN 460
IL H + L + + L LV M + +++ + R I
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
IV G+ +LH+ + II+RDLK NVLLD D N +ISD G+A G+ T G
Sbjct: 297 QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA--GQTKTKGYAG 351
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPN 570
T G+MAPE + Y D F+ GV L E+I R G ++RG N
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFRARGEKVEN 398
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVL-SDGKEIAVKRLSSCSEQGNAEFTNEVL-- 402
LE + F D +LG+GGFG V+ + + GK A K+L+ + + ++
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 403 LILKLQHKNLVKLLGFCVDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKR-INIVN 460
IL H + L + + L LV M + +++ + R I
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
IV G+ +LH+ + II+RDLK NVLLD D N +ISD G+A G+ T G
Sbjct: 297 QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA--GQTKTKGYAG 351
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPN 570
T G+MAPE + Y D F+ GV L E+I R G ++RG N
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFRARGEKVEN 398
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S A + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRAALCGTLDYLPP 178
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 21/208 (10%)
Query: 355 NFSDSNMLGQGGFGPVY--KGVLSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKL 407
N+ +G+G F V + +L+ G+E+A+K +L+ S Q + EV ++ L
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQ---KLFREVRIMKIL 68
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
H N+VKL F V EK L Y M +S + G + + + IV +
Sbjct: 69 NHPNIVKL--FEVIETEKTL-YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ 125
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H+ RI+HRDLKA N+LLD DMN KI+DFG + F G+++T G+ Y AP
Sbjct: 126 YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDT--FCGSPPYAAP 179
Query: 528 EYAMEGLY-SIKSDVFSFGVLLIEIITG 554
E Y + DV+S GV+L +++G
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 362 LGQGGFGPVYKG------VLSDGKEIAVKRLS--SCSEQGNAEFTNEVLLILKLQHKNLV 413
LG+G FG V + + + +AVK L + + A + +LI H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 414 KLLGFCVD-GDEKLLVYEFMPNSSLDAIL------FDPRK-------RGLLCWSKRINIV 459
LLG C G +++ EF +L L F P K + L I
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+ KG+ +L + + IHRDL A N+LL KI DFG+AR V
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRL-SSCSEQGNAEFTNEVLLILKL 407
D + D +G+G +G V K V G+ +AVKR+ S+ E+ + ++ ++++
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS 77
Query: 408 QH-KNLVKLLGFCVDGDEKLLVYEFMPNSSLD-------AILFDPRKRGLLCWSKRINIV 459
+V+ G + + E M ++S D ++L D +L I
Sbjct: 78 SDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILG-----KIT 131
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
VK + +L E+ L+IIHRD+K SN+LLD N K+ DFG++ S + R
Sbjct: 132 LATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS---IAKTRDA 186
Query: 520 GTYGYMAPEY----AMEGLYSIKSDVFSFGVLLIEIITGR 555
G YMAPE A Y ++SDV+S G+ L E+ TGR
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINAMLNHENVVKF 70
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 121
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 70
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 121
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSC--SEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
+G G +G V + G+++A+K+LS SE E+LL+ +QH+N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 419 CVDGDEKLLVYEF---MP--NSSLDAILFDPRKRGLLCWSKRIN-IVNGIVKGILYLHED 472
Y+F MP + L I+ GL ++I +V ++KG+ Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIM------GLKFSEEKIQYLVYQMLKGLKYIHSA 145
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
++HRDLK N+ ++ D KI DFG+AR + V T Y APE +
Sbjct: 146 G---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILS 197
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TG+
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ + +L L R G+ + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 68
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 119
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 120 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTD---LCGTLDYLPP 176
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S A + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRAALCGTLDYLPP 175
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 70
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 121
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 109
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 170 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 223
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKMLNHENVVKF 70
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 121
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 70
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 121
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 70
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 121
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 103
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 164 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 217
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 70
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 121
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 70
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 121
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 350 DVATSNFSDSNMLGQGGFGPVY--KGVLSDGKEIAVK-----RLSSCSEQGNAEFTNEVL 402
D+ N+ +G+G F V + +L+ GKE+AVK +L+S S Q + EV
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVR 58
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
++ L H N+VKL F V EK L Y M +S + G + + I
Sbjct: 59 IMKVLNHPNIVKL--FEVIETEKTL-YLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQI 115
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
V + Y H+ I+HRDLKA N+LLD DMN KI+DFG + F +++T G+
Sbjct: 116 VSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDT--FCGSP 169
Query: 523 GYMAPEYAMEGLY-SIKSDVFSFGVLLIEIITG 554
Y APE Y + DV+S GV+L +++G
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTD---LCGTLDYLPP 175
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 109
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 170 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 223
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 362 LGQGGFGPVY--------KGVLSDGKEIAVKRLSS-CSEQGNAEFTNEVLLILKL-QHKN 411
LG+G FG V K + +AVK L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL-------------LCWSKRINI 458
++ LLG C ++ + +L L R G+ + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
+ +G+ YL + + IHRDL A NVL+ + KI+DFG+AR + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +Y+ +SDV+SFGVL+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 111
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 172 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 225
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTD---LCGTLDYLPP 175
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTELCGTLDYLPP 175
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTD---LCGTLDYLPP 180
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPP 192
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G +G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 113
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 174 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 227
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 360 NMLGQGGFGPVY--KGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLG 417
+LG G F V+ K L+ GK A+K + ++ NE+ ++ K++H+N+V L
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 418 FCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
LV + + L D IL +RG+ ++ ++ + YLHE+
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRIL----ERGVYTEKDASLVIQQVLSAVKYLHENG--- 126
Query: 477 IIHRDLKASNVL-LDYDMNPKI--SDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG 533
I+HRDLK N+L L + N KI +DFG++++ G ++TA GT GY+APE +
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTA--CGTPGYVAPEVLAQK 182
Query: 534 LYSIKSDVFSFGVLLIEIITG 554
YS D +S GV+ ++ G
Sbjct: 183 PYSKAVDCWSIGVITYILLCG 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPP 180
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 83
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 144 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 197
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPP 175
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 362 LGQGGFGPVYK-GVLSDGKEIAVKRL--SSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
+G G +G K SDGK + K L S +E +EV L+ +L+H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 419 CVDGDEKLL--VYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIVKGILYLHE--DS 473
+D L V E+ L +++ ++R L + ++ + + H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 474 RLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG 533
++HRDLK +NV LD N K+ DFG+ARI VGT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--FVGTPYYMSPEQMNRM 191
Query: 534 LYSIKSDVFSFGVLLIEI 551
Y+ KSD++S G LL E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 87
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 148 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 201
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 80
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 141 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 194
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 94
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 155 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 208
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPP 201
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 154
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 215 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 268
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPP 178
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 87
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 148 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 201
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 75
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 189
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 88
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 149 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 202
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 17/212 (8%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
+++ +F + LG G G V+K + ++L + N+++ L++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVL 58
Query: 409 HK-NLVKLLGFC----VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIV 463
H+ N ++GF DG E + E M SLD +L +K G + + ++
Sbjct: 59 HECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVI 114
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL E + +I+HRD+K SN+L++ K+ DFG++ G + VGT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 168
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
YM+PE YS++SD++S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 75
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 189
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRXXLCGTLDYLPP 177
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 75
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 189
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 76
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 137 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 190
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSC--SEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
+G G +G V + G+++A+K+LS SE E+LL+ +QH+N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 419 CVDGDEKLLVYEF---MP--NSSLDAILFDPRKRGLLCWSKRIN-IVNGIVKGILYLHED 472
Y+F MP + L I+ G+ ++I +V ++KG+ Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIM------GMEFSEEKIQYLVYQMLKGLKYIHSA 163
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
++HRDLK N+ ++ D KI DFG+AR + V T Y APE +
Sbjct: 164 G---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILS 215
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TG+
Sbjct: 216 WMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 14/229 (6%)
Query: 357 SDSNMLGQGGFGPVYK-GVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
S + +LG G FG V+K + G ++A K + + + E NE+ ++ +L H NL++L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 416 LGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRL 475
++ +LV E++ L + D L I + I +GI ++H+ +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYN--LTELDTILFMKQICEGIRHMHQ---M 206
Query: 476 RIIHRDLKASNVL-LDYDMNP-KISDFGMARIFAGSEG-EVNTARIVGTYGYMAPEYAME 532
I+H DLK N+L ++ D KI DFG+AR + E +VN GT ++APE
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN----FGTPEFLAPEVVNY 262
Query: 533 GLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRGATAPNLLAYAWHLWNE 581
S +D++S GV+ +++G + + T N+LA W L +E
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSG-LSPFLGDNDAETLNNILACRWDLEDE 310
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 79
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 140 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 193
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + S + + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT----LCGTLDYLPP 176
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 17/212 (8%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
+++ +F + LG G G V+K + ++L + N+++ L++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVL 58
Query: 409 HK-NLVKLLGFC----VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIV 463
H+ N ++GF DG E + E M SLD +L +K G + + ++
Sbjct: 59 HECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVI 114
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL E + +I+HRD+K SN+L++ K+ DFG++ G + VGT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 168
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
YM+PE YS++SD++S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 17/212 (8%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
+++ +F + LG G G V+K + ++L + N+++ L++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVL 58
Query: 409 HK-NLVKLLGFC----VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIV 463
H+ N ++GF DG E + E M SLD +L +K G + + ++
Sbjct: 59 HECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVI 114
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
KG+ YL E + +I+HRD+K SN+L++ K+ DFG++ G + VGT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 168
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
YM+PE YS++SD++S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHK-NLV 413
+F + LG G G V+K + ++L + N+++ L++ H+ N
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHECNSP 126
Query: 414 KLLGFC----VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
++GF DG E + E M SLD +L +K G + + ++KG+ YL
Sbjct: 127 YIVGFYGAFYSDG-EISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYL 182
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
E + +I+HRD+K SN+L++ K+ DFG++ G + VGT YM+PE
Sbjct: 183 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 236
Query: 530 AMEGLYSIKSDVFSFGVLLIEIITGR 555
YS++SD++S G+ L+E+ GR
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLIL-KLQHKNL 412
+++D+ ++G G FG VY+ L D G+ +A+K++ + F N L I+ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 75
Query: 413 VKLLGFCVDGDEKL------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
V+L F EK LV +++P + R + L + + + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYM 525
Y+H I HRD+K N+LLD D K+ DFG A+ GE N + I Y Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 189
Query: 526 APEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
APE Y+ DV+S G +L E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY + K I A+K L E+ E EV + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H ++IHRD+K N+LL KI+DFG + + A S A + GT Y+ P
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRAALCGTLDYLPP 175
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPP 174
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 104/208 (50%), Gaps = 21/208 (10%)
Query: 355 NFSDSNMLGQGGFGPVY--KGVLSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKL 407
N+ +G+G F V + +L+ G+E+A+K +L+ S Q + EV ++ L
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQ---KLFREVRIMKIL 71
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
H N+VKL F V EK L Y M +S + G + + + IV +
Sbjct: 72 NHPNIVKL--FEVIETEKTL-YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ 128
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H+ RI+HRDLKA N+LLD DMN KI+DFG + F G+++ G Y AP
Sbjct: 129 YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDA--FCGAPPYAAP 182
Query: 528 EYAMEGLY-SIKSDVFSFGVLLIEIITG 554
E Y + DV+S GV+L +++G
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 356 FSDSNMLGQGGFGPVYKGVLSD----GKEIAVKRLSSCSEQGN-AEFTNEVLLILKLQHK 410
F LG G F V VL++ GK AVK + + +G + NE+ ++ K++H+
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N+V L + LV + + L D I+ ++G ++ ++ + YL
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIV----EKGFYTEKDASTLIRQVLDAVYYL 136
Query: 470 HEDSRLRIIHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
H R+ I+HRDLK N+L D + ISDFG++++ G ++TA GT GY+A
Sbjct: 137 H---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMSTA--CGTPGYVA 190
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIITG 554
PE + YS D +S GV+ ++ G
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 17/214 (7%)
Query: 348 TLDVAT--SNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRL-----SSCSEQGNAEFTN 399
LDV + + + LG+G F VYK + +I A+K++ S + N
Sbjct: 2 ALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 400 EVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV 459
E+ L+ +L H N++ LL LV++FM + L+ I+ D +L S +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKD--NSLVLTPSHIKAYM 118
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
++G+ YLH+ I+HRDLK +N+LLD + K++DFG+A+ F GS ++V
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYXHQVV 174
Query: 520 GTYGYMAPEYAMEG-LYSIKSDVFSFGVLLIEII 552
T Y APE +Y + D+++ G +L E++
Sbjct: 175 -TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
+++ +F + LG G G V+K + ++L + N+++ L++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVL 58
Query: 409 HK----NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
H+ +V G E + E M SLD +L +K G + + ++K
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIK 115
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGY 524
G+ YL E + +I+HRD+K SN+L++ K+ DFG++ G + VGT Y
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSY 169
Query: 525 MAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
M+PE YS++SD++S G+ L+E+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ 408
+++ +F + LG G G V+K + ++L + N+++ L++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVL 58
Query: 409 HK----NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
H+ +V G E + E M SLD +L +K G + + ++K
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIK 115
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGY 524
G+ YL E + +I+HRD+K SN+L++ K+ DFG++ G + VGT Y
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSY 169
Query: 525 MAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
M+PE YS++SD++S G+ L+E+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPP 178
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 24/224 (10%)
Query: 351 VATSNFSDSNMLGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLI 404
+ATS + +G G +G VYK G K + V EV L+
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 405 LKLQ---HKNLVKLLGFCV----DGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRI 456
+L+ H N+V+L+ C D + K+ LV+E + + L L GL + +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK- 123
Query: 457 NIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA 516
+++ ++G+ +LH + I+HRDLK N+L+ K++DFG+ARI++ ++
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALT 177
Query: 517 RIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGF 560
+V T Y APE ++ Y+ D++S G + E+ RR F
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLF 219
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPP 179
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTXLCGTLDYLPP 175
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 355 NFSDSNMLGQGGFGPVY--KGVLSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKL 407
N+ +G+G F V + +L+ GKE+AVK +L+S S Q + EV ++ L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGI 466
H N+VKL LV E+ + D ++ R + +K IV +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK----FRQIVSAV 126
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
Y H+ I+HRDLKA N+LLD DMN KI+DFG + F +++T G+ Y A
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDT--FCGSPPYAA 180
Query: 527 PEYAMEGLY-SIKSDVFSFGVLLIEIITG 554
PE Y + DV+S GV+L +++G
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 355 NFSDSNMLGQGGFGPVY--KGVLSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKL 407
N+ +G+G F V + +L+ GKE+AVK +L+S S Q + EV ++ L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGI 466
H N+VKL LV E+ + D ++ R + +K IV +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK----FRQIVSAV 126
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
Y H+ I+HRDLKA N+LLD DMN KI+DFG + F +++T G+ Y A
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDT--FCGSPPYAA 180
Query: 527 PEYAMEGLY-SIKSDVFSFGVLLIEIITG 554
PE Y + DV+S GV+L +++G
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + + GT Y+ P
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDD---LCGTLDYLPP 201
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P + L +K + + + +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITELANALS 127
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPP 180
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPP 172
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPP 180
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E + K D++S GVL E + G+
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRXXLCGTLDYLPP 175
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
+F + ++G GGFG V+K DGK +KR+ +E+ EV + KL H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIV 67
Query: 414 KLLGFCVDGDEK-----------------LLVYEFMPNSSLDAILFDPRKRGLLCWSKRI 456
G C DG + + EF +L+ + + R+ L +
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLAL 125
Query: 457 NIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA 516
+ I KG+ Y+H ++I+RDLK SN+ L KI DFG+ + +
Sbjct: 126 ELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLV---TSLKNDGKRX 179
Query: 517 RIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEII 552
R GT YM+PE Y + D+++ G++L E++
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRXXLCGTLDYLPP 178
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 29/206 (14%)
Query: 362 LGQGGFGPVYKGVLSDGKE------IAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKL 415
LG+G G V V +E + +KR C E E+ + L H+N+VK
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKF 69
Query: 416 LGFCVDGDEKLLVYEFMPNSSL------DAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
G +G+ + L E+ L D + +P + + ++ G++YL
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMAGVVYL 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE- 528
H + I HRD+K N+LLD N KISDFG+A +F + E ++ GT Y+APE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
++ DV+S G++L ++ G
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFT--NEVLLILKLQH 409
S + +GQG FG V+K G+++A+K++ +E+ T E+ ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 410 KNLVKLLGFCVDGDEKL--------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
+N+V L+ C LV++F L +L + + L KR+ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRV--MQM 133
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFA---GSEGEVNTARI 518
++ G+ Y+H R +I+HRD+KA+NVL+ D K++DFG+AR F+ S+ R+
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 519 VGTYGYMAPEYAM-EGLYSIKSDVFSFGVLLIEIIT 553
V T Y PE + E Y D++ G ++ E+ T
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P + L +K + + + +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITELANALS 127
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRXXLXGTLDYLPP 180
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 92/217 (42%), Gaps = 30/217 (13%)
Query: 362 LGQGGFGPV-----YKGVLSDGK-EIAVKRLSSCSEQGNAEFTNEVLLILKL--QHKNLV 413
LG G FG V Y + SD +AVK L + E L +L H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNG----------- 461
LLG C G L++ E+ D + F RKR +C I+
Sbjct: 91 NLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 462 -----IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA 516
+ KG+ +L + IHRDL A N+LL + KI DFG+AR V
Sbjct: 149 SFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 517 RIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE +Y+ +SDV+S+G+ L E+ +
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH 409
++ +F + LG G G V+K + ++L + N+++ L++ H
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLH 86
Query: 410 K-NLVKLLGFC----VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
+ N ++GF DG E + E M SLD +L +K G + + ++K
Sbjct: 87 ECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIK 142
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGY 524
G+ YL E + +I+HRD+K SN+L++ K+ DFG++ G + VGT Y
Sbjct: 143 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSY 196
Query: 525 MAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
M+PE YS++SD++S G+ L+E+ GR
Sbjct: 197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 15/210 (7%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH 409
++ +F + LG G G V+K + ++L + N+++ L++ H
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLH 62
Query: 410 K----NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKG 465
+ +V G E + E M SLD +L +K G + + ++KG
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKG 119
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYM 525
+ YL E + +I+HRD+K SN+L++ K+ DFG++ G + VGT YM
Sbjct: 120 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYM 173
Query: 526 APEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
+PE YS++SD++S G+ L+E+ GR
Sbjct: 174 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI++FG + + A S + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTT---LCGTLDYLPP 177
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 95/229 (41%), Gaps = 30/229 (13%)
Query: 350 DVATSNFSDSNMLGQGGFGPV-----YKGVLSDGK-EIAVKRLSSCSEQGNAEFTNEVLL 403
+ + S LG G FG V Y + SD +AVK L + E L
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 404 ILKL--QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVN 460
+L H N+V LLG C G L++ E+ D + F RKR +C I+
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIME 159
Query: 461 G----------------IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR 504
+ KG+ +L + IHRDL A N+LL + KI DFG+AR
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR 216
Query: 505 IFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
V +MAPE +Y+ +SDV+S+G+ L E+ +
Sbjct: 217 HIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 92/217 (42%), Gaps = 30/217 (13%)
Query: 362 LGQGGFGPV-----YKGVLSDGK-EIAVKRLSSCSEQGNAEFTNEVLLILKL--QHKNLV 413
LG G FG V Y + SD +AVK L + E L +L H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNG----------- 461
LLG C G L++ E+ D + F RKR +C I+
Sbjct: 107 NLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 462 -----IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA 516
+ KG+ +L + IHRDL A N+LL + KI DFG+AR V
Sbjct: 165 SFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 221
Query: 517 RIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE +Y+ +SDV+S+G+ L E+ +
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH 409
++ +F + LG G G V+K + ++L + N+++ L++ H
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLH 78
Query: 410 K----NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKG 465
+ +V G E + E M SLD +L +K G + + ++KG
Sbjct: 79 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKG 135
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYM 525
+ YL E + +I+HRD+K SN+L++ K+ DFG++ G + VGT YM
Sbjct: 136 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYM 189
Query: 526 APEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTG 559
+PE YS++SD++S G+ L+E+ GR G
Sbjct: 190 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG 223
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 38/233 (16%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCS---EQGNAEFTNEVLLI 404
+ + ++FS ++G+GGFG VY +D GK A+K L +QG NE ++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM- 242
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLV---YEFMPNSSLDAIL---------FDPRKRGLLCW 452
L GD +V Y F L IL + + G+
Sbjct: 243 -----------LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 291
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
+ I+ G+ ++H +R +++RDLK +N+LLD + +ISD G+A F+ +
Sbjct: 292 ADMRFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 513 VNTARIVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
+ VGT+GYMAPE +G+ Y +D FS G +L +++ G ++ F Q +
Sbjct: 349 AS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQHK 395
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 38/233 (16%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCS---EQGNAEFTNEVLLI 404
+ + ++FS ++G+GGFG VY +D GK A+K L +QG NE ++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM- 242
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLV---YEFMPNSSLDAIL---------FDPRKRGLLCW 452
L GD +V Y F L IL + + G+
Sbjct: 243 -----------LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 291
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
+ I+ G+ ++H +R +++RDLK +N+LLD + +ISD G+A F+ +
Sbjct: 292 ADMRFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 513 VNTARIVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
+ VGT+GYMAPE +G+ Y +D FS G +L +++ G ++ F Q +
Sbjct: 349 AS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQHK 395
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 92/217 (42%), Gaps = 30/217 (13%)
Query: 362 LGQGGFGPV-----YKGVLSDGK-EIAVKRLSSCSEQGNAEFTNEVLLILKL--QHKNLV 413
LG G FG V Y + SD +AVK L + E L +L H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNG----------- 461
LLG C G L++ E+ D + F RKR +C I+
Sbjct: 109 NLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 462 -----IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA 516
+ KG+ +L + IHRDL A N+LL + KI DFG+AR V
Sbjct: 167 SFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 223
Query: 517 RIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE +Y+ +SDV+S+G+ L E+ +
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFT--NEVLLILKLQH 409
S + +GQG FG V+K G+++A+K++ +E+ T E+ ++ L+H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 410 KNLVKLLGFCVDGDEKL--------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
+N+V L+ C LV++F L +L + + L KR+ +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRV--MQM 132
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFA---GSEGEVNTARI 518
++ G+ Y+H R +I+HRD+KA+NVL+ D K++DFG+AR F+ S+ R+
Sbjct: 133 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 519 VGTYGYMAPEYAM-EGLYSIKSDVFSFGVLLIEIIT 553
V T Y PE + E Y D++ G ++ E+ T
Sbjct: 190 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFT--NEVLLILKLQH 409
S + +GQG FG V+K G+++A+K++ +E+ T E+ ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 410 KNLVKLLGFCVDGDEKL--------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
+N+V L+ C LV++F L +L + + L KR+ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRV--MQM 133
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFA---GSEGEVNTARI 518
++ G+ Y+H R +I+HRD+KA+NVL+ D K++DFG+AR F+ S+ R+
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 519 VGTYGYMAPEYAM-EGLYSIKSDVFSFGVLLIEIIT 553
V T Y PE + E Y D++ G ++ E+ T
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + + A S + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDD---LCGTLDYLPP 178
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSS----CSEQGNAEFTNEVLL 403
+ + +F MLG+G FG V+ + A+K L + + +L
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 404 ILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIV 463
L +H L + + V E++ L + K L S+ I+
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL---SRATFYAAEII 129
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
G+ +LH I++RDLK N+LLD D + KI+DFGM + G+ T GT
Sbjct: 130 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPD 184
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y+ D +SFGVLL E++ G+
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 355 NFSDSNMLGQGGFGPVY--KGVLSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKL 407
N+ +G+G F V + +L+ GKE+AV+ +L+S S Q + EV ++ L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGI 466
H N+VKL LV E+ + D ++ R + +K IV +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK----FRQIVSAV 126
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
Y H+ I+HRDLKA N+LLD DMN KI+DFG + F +++T G+ Y A
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDT--FCGSPPYAA 180
Query: 527 PEYAMEGLY-SIKSDVFSFGVLLIEIITG 554
PE Y + DV+S GV+L +++G
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 362 LGQGGFGPVYKGVLSDGK-EIAVKRLSSCS-------------EQGNAEFTNEVLLILKL 407
LG G +G V +G E A+K + E+ + E NE+ L+ L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
H N++KL D LV EF L + + K NI+ I+ GI
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGIC 160
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYD---MNPKISDFGMARIFAGSEGEVNTARIVGTYGY 524
YLH+ + I+HRD+K N+LL+ +N KI DFG++ F+ + +GT Y
Sbjct: 161 YLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRDRLGTAYY 214
Query: 525 MAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
+APE ++ Y+ K DV+S GV++ ++ G
Sbjct: 215 IAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 32/230 (13%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKL 407
+ + ++FS ++G+GGFG VY +D GK A+K C ++ + L L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----CLDKKRIKMKQGETLAL-- 237
Query: 408 QHKNLVKLLGFCVDGDEKLLV---YEFMPNSSLDAIL---------FDPRKRGLLCWSKR 455
N +L GD +V Y F L IL + + G+ +
Sbjct: 238 ---NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM 294
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT 515
I+ G+ ++H +R +++RDLK +N+LLD + +ISD G+A F+ + +
Sbjct: 295 RFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS- 350
Query: 516 ARIVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
VGT+GYMAPE +G+ Y +D FS G +L +++ G ++ F Q +
Sbjct: 351 ---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQHK 395
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 92/217 (42%), Gaps = 30/217 (13%)
Query: 362 LGQGGFGPV-----YKGVLSDGK-EIAVKRLSSCSEQGNAEFTNEVLLILKL--QHKNLV 413
LG G FG V Y + SD +AVK L + E L +L H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR-GLLCWSKRINIVNG----------- 461
LLG C G L++ E+ D + F RKR +C I+
Sbjct: 114 NLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 462 -----IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA 516
+ KG+ +L + IHRDL A N+LL + KI DFG+AR V
Sbjct: 172 SFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 228
Query: 517 RIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE +Y+ +SDV+S+G+ L E+ +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFT--NEVLLILKLQH 409
S + +GQG FG V+K G+++A+K++ +E+ T E+ ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 410 KNLVKLLGFCVDGDEKL--------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
+N+V L+ C LV++F L +L + + L KR+ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRV--MQM 133
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFA---GSEGEVNTARI 518
++ G+ Y+H R +I+HRD+KA+NVL+ D K++DFG+AR F+ S+ R+
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 519 VGTYGYMAPEYAM-EGLYSIKSDVFSFGVLLIEIIT 553
V T Y PE + E Y D++ G ++ E+ T
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 38/233 (16%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCS---EQGNAEFTNEVLLI 404
+ + ++FS ++G+GGFG VY +D GK A+K L +QG NE ++
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM- 241
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLV---YEFMPNSSLDAIL---------FDPRKRGLLCW 452
L GD +V Y F L IL + + G+
Sbjct: 242 -----------LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 290
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
+ I+ G+ ++H +R +++RDLK +N+LLD + +ISD G+A F+ +
Sbjct: 291 ADMRFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 347
Query: 513 VNTARIVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGRRNTGFNQSR 564
+ VGT+GYMAPE +G+ Y +D FS G +L +++ G ++ F Q +
Sbjct: 348 AS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQHK 394
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRL--SSCSEQG-NAEFTNEVLLILKLQHK 410
+F LG+G FG VY K I A+K L S ++G + E+ + L+H
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
N++++ + D L+ EF P L L +K G + + + + Y H
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCH 132
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
E ++IHRD+K N+L+ Y KI+DFG + + A S + + GT Y+ PE
Sbjct: 133 ER---KVIHRDIKPENLLMGYKGELKIADFGWS-VHAPS---LRRRXMCGTLDYLPPEMI 185
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ K D++ GVL E + G
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 112/220 (50%), Gaps = 34/220 (15%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRL-SSCSEQGNAEFT-NEVLLILKLQ-HKNLVKLLG 417
LG+G +G V+K + G+ +AVK++ + +A+ T E++++ +L H+N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 418 FC-VDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRL 475
D D + LV+++M + L A++ + +L + +V ++K I YLH
Sbjct: 77 VLRADNDRDVYLVFDYM-ETDLHAVI----RANILEPVHKQYVVYQLIKVIKYLHSGG-- 129
Query: 476 RIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI----------------- 518
++HRD+K SN+LL+ + + K++DFG++R F N +
Sbjct: 130 -LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 519 --VGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
V T Y APE + Y+ D++S G +L EI+ G+
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 14/205 (6%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKLQH 409
+F LG+G FG VY K I A+K L E+ E EV + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N+++L G+ D L+ E+ P L + + +K + + + + Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H R+IHRD+K N+LL + KI+DFG + + A S + GT Y+ PE
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTT---LCGTLDYLPPEM 181
Query: 530 AMEGLYSIKSDVFSFGVLLIEIITG 554
++ K D++S GVL E + G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRL--SSCSEQG-NAEFTNEVLLILKLQHK 410
+F LG+G FG VY K I A+K L S ++G + E+ + L+H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
N++++ + D L+ EF P L L +K G + + + + Y H
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCH 131
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
E ++IHRD+K N+L+ Y KI+DFG + + A S + + GT Y+ PE
Sbjct: 132 ER---KVIHRDIKPENLLMGYKGELKIADFGWS-VHAPS---LRRRXMCGTLDYLPPEMI 184
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ K D++ GVL E + G
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 354 SNFSD----SNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNA---EFTNEVLLIL 405
S+ SD +LG GG V+ L +++AVK L + + + F E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 406 KLQHKNLVKLLGF----CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
L H +V + G +V E++ +L I+ G + + I ++
Sbjct: 68 ALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIAD 124
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV-NTARIVG 520
+ + + H++ IIHRD+K +N+++ K+ DFG+AR A S V TA ++G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T Y++PE A +SDV+S G +L E++TG
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 355 NFSDSNMLGQGGFGPVY--KGVLSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKL 407
N+ +G+G F V + +L+ GKE+AV+ +L+S S Q + EV ++ L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGI 466
H N+VKL LV E+ + D ++ R + +K IV +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK----FRQIVSAV 126
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
Y H+ I+HRDLKA N+LLD DMN KI+DFG + F G+ Y A
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDEFCGSPPYAA 180
Query: 527 PEYAMEGLY-SIKSDVFSFGVLLIEIITG 554
PE Y + DV+S GV+L +++G
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 102/210 (48%), Gaps = 25/210 (11%)
Query: 355 NFSDSNMLGQGGFGPVY--KGVLSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKL 407
N+ +G+G F V + +L+ GKE+AVK +L+S S Q + EV ++ L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGI 466
H N+VKL LV E+ + D ++ R + +K IV +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK----FRQIVSAV 126
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFA-GSEGEVNTARIVGTYGYM 525
Y H+ I+HRDLKA N+LLD DMN KI+DFG + F G++ + G Y
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA----FCGAPPYA 179
Query: 526 APEYAMEGLY-SIKSDVFSFGVLLIEIITG 554
APE Y + DV+S GV+L +++G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 102/209 (48%), Gaps = 23/209 (11%)
Query: 355 NFSDSNMLGQGGFGPVY--KGVLSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKL 407
N+ +G+G F V + VL+ G+E+AVK +L+ S Q + EV ++ L
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQ---KLFREVRIMKIL 71
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGI 466
H N+VKL LV E+ + D ++ R + +K IV +
Sbjct: 72 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK----FRQIVSAV 127
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
Y H+ I+HRDLKA N+LLD DMN KI+DFG + F +++T G+ Y A
Sbjct: 128 QYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG-NKLDT--FCGSPPYAA 181
Query: 527 PEYAMEGLY-SIKSDVFSFGVLLIEIITG 554
PE Y + DV+S GV+L +++G
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI+DFG + S + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS----RRTTLSGTLDYLPP 176
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRL--SSCSEQG-NAEFTNEVLLILKLQHK 410
+F LG+G FG VY K I A+K L S ++G + E+ + L+H
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
N++++ + D L+ EF P L L +K G + + + + Y H
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCH 131
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
E ++IHRD+K N+L+ Y KI+DFG + + A S + + GT Y+ PE
Sbjct: 132 ER---KVIHRDIKPENLLMGYKGELKIADFGWS-VHAPS---LRRRXMCGTLDYLPPEMI 184
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ K D++ GVL E + G
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 352 ATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKL 407
A +F LG+G FG VY K I A+K L E+ E EV + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H N+++L G+ D L+ E+ P L + + +K + + + +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y H R+IHRD+K N+LL KI++FG + + A S + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTT---LCGTLDYLPP 178
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E ++ K D++S GVL E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 354 SNFSD----SNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNA---EFTNEVLLIL 405
S+ SD +LG GG V+ L +++AVK L + + + F E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 406 KLQHKNLVKLL----GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
L H +V + G +V E++ +L I+ G + + I ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIAD 124
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV-NTARIVG 520
+ + + H++ IIHRD+K +N+++ K+ DFG+AR A S V TA ++G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T Y++PE A +SDV+S G +L E++TG
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
Query: 399 NEVLLILKLQHKNLVKLLGFCVDGDEKLL--VYEFMPNSSLDAILFDPRKRGLLCWSKRI 456
E+ ++ KL H N+VKL+ D +E L V+E + + + P + L R
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV---PTLKPLSEDQARF 141
Query: 457 NIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA 516
+ ++KGI YLH +IIHRD+K SN+L+ D + KI+DFG++ F GS+ ++
Sbjct: 142 YFQD-LIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 517 RIVGTYGYMAPEYAME--GLYSIKS-DVFSFGVLLIEIITGR 555
VGT +MAPE E ++S K+ DV++ GV L + G+
Sbjct: 198 --VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCS-EQGNAE--FTNEVLLILKLQH 409
+F LG+G FG VY K I A+K L E+ E EV + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N+++L G+ D L+ E+ P L + + +K + + + + Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H R+IHRD+K N+LL + KI+DFG + S + + GT Y+ PE
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT----LCGTLDYLPPEM 181
Query: 530 AMEGLYSIKSDVFSFGVLLIEIITG 554
++ K D++S GVL E + G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 354 SNFSD----SNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNA---EFTNEVLLIL 405
S+ SD +LG GG V+ L +++AVK L + + + F E
Sbjct: 25 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 84
Query: 406 KLQHKNLVKLL----GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
L H +V + G +V E++ +L I+ G + + I ++
Sbjct: 85 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIAD 141
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV-NTARIVG 520
+ + + H++ IIHRD+K +N+++ K+ DFG+AR A S V TA ++G
Sbjct: 142 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T Y++PE A +SDV+S G +L E++TG
Sbjct: 199 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSS----CSEQGNAEFTNEVLL 403
+ + +F MLG+G FG V+ + A+K L + + +L
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 404 ILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIV 463
L +H L + + V E++ L + K L S+ I+
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL---SRATFYAAEII 128
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
G+ +LH I++RDLK N+LLD D + KI+DFGM + G+ T GT
Sbjct: 129 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPD 183
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y+ D +SFGVLL E++ G+
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 22/204 (10%)
Query: 360 NMLGQGGFGPVYKGVLSDGKE----IAVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLVK 414
++LG G F V +L++ K +A+K ++ + +G NE+ ++ K++H N+V
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 415 LLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L G L+ + + L D I+ ++G ++ ++ + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 474 RLRIIHRDLKASNVL---LDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L I+HRDLK N+L LD D ISDFG++++ G V + GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSV-LSTACGTPGYVAPEVL 190
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ YS D +S GV+ ++ G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 22/204 (10%)
Query: 360 NMLGQGGFGPVYKGVLSDGKE----IAVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLVK 414
++LG G F V +L++ K +A+K ++ + +G NE+ ++ K++H N+V
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 415 LLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L G L+ + + L D I+ ++G ++ ++ + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 474 RLRIIHRDLKASNVL---LDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L I+HRDLK N+L LD D ISDFG++++ G V + GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSV-LSTACGTPGYVAPEVL 190
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ YS D +S GV+ ++ G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVK---RLSSCSEQGNAEFTNEVLLILK 406
V ++ + LG G FG V G G ++AVK R S + E+ +
Sbjct: 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL 72
Query: 407 LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKG 465
+H +++KL + +V E++ L D I K G L + + I+ G
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSG 128
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYM 525
+ Y H R ++HRDLK NVLLD MN KI+DFG++ + S+GE G+ Y
Sbjct: 129 VDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEF-LRXSCGSPNYA 182
Query: 526 APEYAMEGLYS-IKSDVFSFGVLLIEIITG 554
APE LY+ + D++S GV+L ++ G
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 21/234 (8%)
Query: 327 YQHVRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRL 386
Y+ ++++ ++ Y+D + L + + LG G FG V KG K + +
Sbjct: 6 YESPYADPEEIRPKEVYLDRKLLTL------EDKELGSGNFGTVKKGYYQMKKVVKTVAV 59
Query: 387 SSCSEQGNA-----EFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 441
+ N E E ++ +L + +V+++G C + + +LV E L+ L
Sbjct: 60 KILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL 118
Query: 442 FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFG 501
R + I +V+ + G+ YL E + +HRDL A NVLL KISDFG
Sbjct: 119 QQNRH---VKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG 172
Query: 502 MARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+++ E A+ G + + APE +S KSDV+SFGVL+ E +
Sbjct: 173 LSKALRADEN-YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 21/234 (8%)
Query: 327 YQHVRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRL 386
Y+ ++++ ++ Y+D + L + + LG G FG V KG K + +
Sbjct: 6 YESPYADPEEIRPKEVYLDRKLLTL------EDKELGSGNFGTVKKGYYQMKKVVKTVAV 59
Query: 387 SSCSEQGNA-----EFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 441
+ N E E ++ +L + +V+++G C + + +LV E L+ L
Sbjct: 60 KILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL 118
Query: 442 FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFG 501
R + I +V+ + G+ YL E + +HRDL A NVLL KISDFG
Sbjct: 119 QQNRH---VKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG 172
Query: 502 MARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+++ E A+ G + + APE +S KSDV+SFGVL+ E +
Sbjct: 173 LSKALRADEN-YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 22/204 (10%)
Query: 360 NMLGQGGFGPVYKGVLSDGKE----IAVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLVK 414
++LG G F V +L++ K +A+K ++ + +G NE+ ++ K++H N+V
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 415 LLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L G L+ + + L D I+ ++G ++ ++ + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 474 RLRIIHRDLKASNVL---LDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L I+HRDLK N+L LD D ISDFG++++ G V + GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSV-LSTACGTPGYVAPEVL 190
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ YS D +S GV+ ++ G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 21/226 (9%)
Query: 335 DDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGN 394
++++ ++ Y+D + L + + LG G FG V KG K + + + N
Sbjct: 356 EEIRPKEVYLDRKLLTL------EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 409
Query: 395 A-----EFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL 449
E E ++ +L + +V+++G C + + +LV E L+ L R
Sbjct: 410 DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--- 465
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
+ I +V+ + G+ YL E + +HRDL A NVLL KISDFG+++
Sbjct: 466 VKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 522
Query: 510 EGEVNTARIVGTY--GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E A+ G + + APE +S KSDV+SFGVL+ E +
Sbjct: 523 EN-YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 21/226 (9%)
Query: 335 DDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGN 394
++++ ++ Y+D + L + + LG G FG V KG K + + + N
Sbjct: 357 EEIRPKEVYLDRKLLTL------EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 410
Query: 395 A-----EFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL 449
E E ++ +L + +V+++G C + + +LV E L+ L R
Sbjct: 411 DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--- 466
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
+ I +V+ + G+ YL E + +HRDL A NVLL KISDFG+++
Sbjct: 467 VKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 523
Query: 510 EGEVNTARIVGTY--GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E A+ G + + APE +S KSDV+SFGVL+ E +
Sbjct: 524 EN-YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 22/204 (10%)
Query: 360 NMLGQGGFGPVYKGVLSDGKE----IAVKRLSSCSEQG-NAEFTNEVLLILKLQHKNLVK 414
++LG G F V +L++ K +A+K ++ + +G NE+ ++ K++H N+V
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 415 LLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L G L+ + + L D I+ ++G ++ ++ + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 474 RLRIIHRDLKASNVL---LDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L I+HRDLK N+L LD D ISDFG++++ G V + GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSV-LSTACGTPGYVAPEVL 190
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ YS D +S GV+ ++ G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 21/226 (9%)
Query: 335 DDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGN 394
++++ ++ Y+D + L + + LG G FG V KG K + + + N
Sbjct: 12 EEIRPKEVYLDRKLLTL------EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 65
Query: 395 A-----EFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL 449
E E ++ +L + +V+++G C + + +LV E L+ L R
Sbjct: 66 DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--- 121
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
+ I +V+ + G+ YL E + +HRDL A NVLL KISDFG+++
Sbjct: 122 VKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 178
Query: 510 EGEVNTARIVGTY--GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E A+ G + + APE +S KSDV+SFGVL+ E +
Sbjct: 179 EN-YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVLSDGK----EIAVKRLSS-CSEQGNAEFTNEVLLIL 405
+A + + +LG+G FG VY+GV ++ K +AVK C+ +F +E +++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 406 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKG 465
L H ++VKL+G ++ + ++ E P L L R + L + I K
Sbjct: 65 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKA 121
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYM 525
+ YL + +HRD+ N+L+ K+ DFG++R + E + +M
Sbjct: 122 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWM 177
Query: 526 APEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGF 560
+PE ++ SDV+ F V + EI++ + F
Sbjct: 178 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 21/226 (9%)
Query: 335 DDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGN 394
++++ ++ Y+D + L + + LG G FG V KG K + + + N
Sbjct: 4 EEIRPKEVYLDRKLLTL------EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 57
Query: 395 A-----EFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL 449
E E ++ +L + +V+++G C + + +LV E L+ L R
Sbjct: 58 DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH--- 113
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
+ I +V+ + G+ YL E + +HRDL A NVLL KISDFG+++
Sbjct: 114 VKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170
Query: 510 EGEVNTARIVGTY--GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
E A+ G + + APE +S KSDV+SFGVL+ E +
Sbjct: 171 EN-YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVLSDGK----EIAVKRLSS-CSEQGNAEFTNEVLLIL 405
+A + + +LG+G FG VY+GV ++ K +AVK C+ +F +E +++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 406 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKG 465
L H ++VKL+G ++ + ++ E P L L R + L + I K
Sbjct: 69 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKA 125
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYM 525
+ YL + +HRD+ N+L+ K+ DFG++R + E + +M
Sbjct: 126 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWM 181
Query: 526 APEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGF 560
+PE ++ SDV+ F V + EI++ + F
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVLSDGK----EIAVKRLSS-CSEQGNAEFTNEVLLIL 405
+A + + +LG+G FG VY+GV ++ K +AVK C+ +F +E +++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 406 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKG 465
L H ++VKL+G ++ + ++ E P L L R + L + I K
Sbjct: 81 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKA 137
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYM 525
+ YL + +HRD+ N+L+ K+ DFG++R + E + +M
Sbjct: 138 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWM 193
Query: 526 APEYAMEGLYSIKSDVFSFGVLLIEIITGRRNTGF 560
+PE ++ SDV+ F V + EI++ + F
Sbjct: 194 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 27/223 (12%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKN 411
++F LG+GGFG V++ D A+KR+ E + EV + KL+H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 412 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW------------SKRINIV 459
+V+ ++ + + P L + RK L W S ++I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNT---- 515
I + + +LH ++HRDLK SN+ D K+ DFG+ E E
Sbjct: 125 LQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 516 ---ARIVGTYG---YMAPEYAMEGLYSIKSDVFSFGVLLIEII 552
AR G G YM+PE YS K D+FS G++L E++
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 362 LGQGGFGPVY-KGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILK-LQHKNLVKLLGFC 419
LG G FG V+ S G E +K ++ Q E + +LK L H N++K+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRG-LLCWSKRINIVNGIVKGILYLHEDSRLRII 478
D +V E L + + RG L ++ ++ + Y H ++
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVV 146
Query: 479 HRDLKASNVLLDYDMNP----KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
H+DLK N+L D +P KI DFG+A +F E N A GT YMAPE +
Sbjct: 147 HKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHSTNAA---GTALYMAPEVFKRDV 202
Query: 535 YSIKSDVFSFGVLLIEIITG 554
+ K D++S GV++ ++TG
Sbjct: 203 -TFKCDIWSAGVVMYFLLTG 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 28/213 (13%)
Query: 356 FSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKL-QHKNLVK 414
+++ ++G G FG V++ L + E+A+K++ + F N L I+++ +H N+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVD 96
Query: 415 LLGFCV-DGDEK-----LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVN----GIVK 464
L F +GD+K LV E++P + A R L + + ++ +++
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRA----SRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYG 523
+ Y+H + I HRD+K N+LLD K+ DFG A+I GE N + I Y
Sbjct: 153 SLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA--GEPNVSXICSRY- 206
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE Y+ D++S G ++ E++ G+
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 355 NFSDSNMLGQGGFGPVY--KGVLSDGKEIAVK-----RLSSCSEQGNAEFTNEVLLILKL 407
N+ +G+G F V + +L+ GKE+AVK +L+S S Q + EV + L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKVL 70
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGI 466
H N+VKL LV E+ + D ++ R + +K IV +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK----FRQIVSAV 126
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFA-GSEGEVNTARIVGTYGYM 525
Y H+ I+HRDLKA N+LLD D N KI+DFG + F G++ + G Y
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA----FCGAPPYA 179
Query: 526 APEYAMEGLY-SIKSDVFSFGVLLIEIITG 554
APE Y + DV+S GV+L +++G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 356 FSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSC--SEQGNAEFTNEVLLILKLQHKNL 412
+ D +G G +G V V G ++A+K+L SE E+ L+ ++H+N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 413 VKLLG-FCVDG--DEKLLVYEFMPNSSLD-AILFDPRKRGLLCWSKRIN-IVNGIVKGIL 467
+ LL F D D+ Y MP D L K G RI +V ++KG+
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG----EDRIQFLVYQMLKGLR 142
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
Y+H IIHRDLK N+ ++ D KI DFG+AR + + V T Y AP
Sbjct: 143 YIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAP 194
Query: 528 EYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
E + + Y+ D++S G ++ E+ITG+
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 59/266 (22%)
Query: 349 LDVATSNFSDSNM--------LGQGGFGPVYKGVL----SDGKEIAVKRL--SSCSEQGN 394
+D+ T N +M +G+G FG K +L DG++ +K + S S +
Sbjct: 11 VDLGTENLYFQSMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKER 67
Query: 395 AEFTNEVLLILKLQHKNLVK-------------LLGFCVDGDEKLLVYEFMPNSSLDAIL 441
E EV ++ ++H N+V+ ++ +C GD F ++ +L
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDL------FKRINAQKGVL 121
Query: 442 FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFG 501
F ++ +L W +I + + ++H+ +I+HRD+K+ N+ L D ++ DFG
Sbjct: 122 F--QEDQILDWFVQICL------ALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFG 170
Query: 502 MARIFAGSEGEVNTARI-VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR----- 555
+AR+ + V AR +GT Y++PE Y+ KSD+++ G +L E+ T +
Sbjct: 171 IARVLNST---VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227
Query: 556 ---RNTGFNQSRGATAPNLLAYAWHL 578
+N G+ P L Y++ L
Sbjct: 228 GSMKNLVLKIISGSFPPVSLHYSYDL 253
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 17/211 (8%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH 409
++ +F + LG G G V K I ++L + N+++ L++ H
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHL--EIKPAIRNQIIRELQVLH 69
Query: 410 K-NLVKLLGFC----VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
+ N ++GF DG E + E M SLD +L + ++ K + +++
Sbjct: 70 ECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKEAKRIPEEILGK---VSIAVLR 125
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGY 524
G+ YL E + +I+HRD+K SN+L++ K+ DFG++ G + VGT Y
Sbjct: 126 GLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSY 179
Query: 525 MAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
MAPE YS++SD++S G+ L+E+ GR
Sbjct: 180 MAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 362 LGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKN-----LVKL 415
+G G G V+K G IAVK++ GN E +L+ L + K+ +V+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMR---RSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 416 LGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRL 475
G + + + E M A R +G + + IVK + YL E +
Sbjct: 90 FGTFITNTDVFIAMELMGTC---AEKLKKRMQGPIPERILGKMTVAIVKALYYLKE--KH 144
Query: 476 RIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY-----A 530
+IHRD+K SN+LLD K+ DFG++ + + +A G YMAPE
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---GCAAYMAPERIDPPDP 201
Query: 531 MEGLYSIKSDVFSFGVLLIEIITGR 555
+ Y I++DV+S G+ L+E+ TG+
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 21/234 (8%)
Query: 333 RDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSE 391
RD D KA I + +V + LG+G +G V K + G+ +AVKR+ +
Sbjct: 31 RDLDSKAC-ISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV- 88
Query: 392 QGNAEFTNEVLLILKLQHKNL-----VKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK 446
N++ +L+ L + + + V G + + E M ++SLD
Sbjct: 89 --NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVID 145
Query: 447 RGLLCWSKRI-NIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARI 505
+G + I IVK + +LH S+L +IHRD+K SNVL++ K+ DFG++
Sbjct: 146 KGQTIPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203
Query: 506 FAGSEGEVNTARIVGTYGYMAPEYAMEGL----YSIKSDVFSFGVLLIEIITGR 555
S + A G YMAPE L YS+KSD++S G+ +IE+ R
Sbjct: 204 LVDSVAKTIDA---GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 254
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 360 NMLGQGGFGPVYKGVLSD-GKEIAVK-----RLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
++G+G F V + + + G++ AVK + +S + E + L+H ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRG--LLCWSKRI--NIVNGIVKGILYL 469
+LL +V+EFM + L F+ KR +S+ + + + I++ + Y
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNP---KISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
H+++ IIHRD+K NVLL N K+ DFG+A I G G V R VGT +MA
Sbjct: 147 HDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGR-VGTPHFMA 201
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIITG 554
PE Y DV+ GV+L +++G
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 359 SNMLGQGGFGPVYKGVLSDG-KEIAVKRLS-------SCSEQGNA-EFTNEVLLILKLQH 409
S LG G G V K++A+K +S S E A E+ ++ KL H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
++K+ F D ++ +V E M L D ++ + R + C ++ ++ + Y
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLYFYQMLL-AVQY 129
Query: 469 LHEDSRLRIIHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGY 524
LHE+ IIHRDLK NVLL + D KI+DFG ++I GE + R + GT Y
Sbjct: 130 LHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTY 182
Query: 525 MAPEYAME---GLYSIKSDVFSFGVLLIEIITG-------RRNTGFNQSRGATAPNLLAY 574
+APE + Y+ D +S GV+L ++G R + N +
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 575 AWHLWNEGNALDLIDPLLT 593
W +E ALDL+ LL
Sbjct: 243 VWAEVSE-KALDLVKKLLV 260
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 359 SNMLGQGGFGPVYKGVLSDG-KEIAVKRLS-------SCSEQGNA-EFTNEVLLILKLQH 409
S LG G G V K++A+K +S S E A E+ ++ KL H
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
++K+ F D ++ +V E M L D ++ + R + C ++ ++ + Y
Sbjct: 74 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLYFYQMLL-AVQY 128
Query: 469 LHEDSRLRIIHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGY 524
LHE+ IIHRDLK NVLL + D KI+DFG ++I GE + R + GT Y
Sbjct: 129 LHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTY 181
Query: 525 MAPEYAME---GLYSIKSDVFSFGVLLIEIITG-------RRNTGFNQSRGATAPNLLAY 574
+APE + Y+ D +S GV+L ++G R + N +
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 241
Query: 575 AWHLWNEGNALDLIDPLLT 593
W +E ALDL+ LL
Sbjct: 242 VWAEVSE-KALDLVKKLLV 259
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 352 ATSNFSDSNMLGQGGFGPVYK-GVLSDGKEIAVKRLSS--CSEQGNAEFTNEVLLILKL- 407
+ +F LG G FG V+ +G+ A+K L E TN+ L+L +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
H ++++ G D + ++ +++ L ++L RK + +
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL---RKSQRFPNPVAKFYAAEVCLALE 120
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YLH II+RDLK N+LLD + + KI+DFG A+ T + GT Y+AP
Sbjct: 121 YLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----TYXLCGTPDYIAP 172
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITG 554
E Y+ D +SFG+L+ E++ G
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 21/221 (9%)
Query: 340 QDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA---- 395
++ Y+D + L + + LG G FG V KG K + + + N
Sbjct: 3 KEVYLDRKLLTL------EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 56
Query: 396 -EFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSK 454
E E ++ +L + +V+++G C + + +LV E L+ L R +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKN 112
Query: 455 RINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN 514
I +V+ + G+ YL E + +HRDL A NVLL KISDFG+++ E
Sbjct: 113 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY- 168
Query: 515 TARIVGTY--GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
A+ G + + APE +S KSDV+SFGVL+ E +
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 359 SNMLGQGGFGPVYKGVLSDG-KEIAVKRLS-------SCSEQGNA-EFTNEVLLILKLQH 409
S LG G G V K++A+K +S S E A E+ ++ KL H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
++K+ F D ++ +V E M L D ++ + R + C ++ ++ + Y
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLYFYQMLL-AVQY 129
Query: 469 LHEDSRLRIIHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGY 524
LHE+ IIHRDLK NVLL + D KI+DFG ++I GE + R + GT Y
Sbjct: 130 LHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTY 182
Query: 525 MAPEYAME---GLYSIKSDVFSFGVLLIEIITG-------RRNTGFNQSRGATAPNLLAY 574
+APE + Y+ D +S GV+L ++G R + N +
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 575 AWHLWNEGNALDLIDPLLT 593
W +E ALDL+ LL
Sbjct: 243 VWAEVSE-KALDLVKKLLV 260
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 359 SNMLGQGGFGPVYKGVLSDG-KEIAVKRLS-------SCSEQGNA-EFTNEVLLILKLQH 409
S LG G G V K++A+K +S S E A E+ ++ KL H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
++K+ F D ++ +V E M L D ++ + R + C ++ ++ + Y
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLYFYQMLL-AVQY 129
Query: 469 LHEDSRLRIIHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGY 524
LHE+ IIHRDLK NVLL + D KI+DFG ++I GE + R + GT Y
Sbjct: 130 LHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTY 182
Query: 525 MAPEYAME---GLYSIKSDVFSFGVLLIEIITG-------RRNTGFNQSRGATAPNLLAY 574
+APE + Y+ D +S GV+L ++G R + N +
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 575 AWHLWNEGNALDLIDPLLT 593
W +E ALDL+ LL
Sbjct: 243 VWAEVSE-KALDLVKKLLV 260
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 21/221 (9%)
Query: 340 QDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA---- 395
++ Y+D + L + + LG G FG V KG K + + + N
Sbjct: 3 KEVYLDRKLLTL------EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 56
Query: 396 -EFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSK 454
E E ++ +L + +V+++G C + + +LV E L+ L R +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKN 112
Query: 455 RINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN 514
I +V+ + G+ YL E + +HRDL A NVLL KISDFG+++ E
Sbjct: 113 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN-YY 168
Query: 515 TARIVGTY--GYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
A+ G + + APE +S KSDV+SFGVL+ E +
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 359 SNMLGQGGFGPVYKGVLSDG-KEIAVKRLS-------SCSEQGNA-EFTNEVLLILKLQH 409
S LG G G V K++A+K +S S E A E+ ++ KL H
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
++K+ F D ++ +V E M L D ++ + R + C ++ ++ + Y
Sbjct: 81 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLYFYQMLL-AVQY 135
Query: 469 LHEDSRLRIIHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGY 524
LHE+ IIHRDLK NVLL + D KI+DFG ++I GE + R + GT Y
Sbjct: 136 LHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTY 188
Query: 525 MAPEYAME---GLYSIKSDVFSFGVLLIEIITG-------RRNTGFNQSRGATAPNLLAY 574
+APE + Y+ D +S GV+L ++G R + N +
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 248
Query: 575 AWHLWNEGNALDLIDPLLT 593
W +E ALDL+ LL
Sbjct: 249 VWAEVSE-KALDLVKKLLV 266
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 37 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ + A L+ K L + I++
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILR 155
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 17 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V + G +IAVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 119 FTPATSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 173
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 174 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 225
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y++ D++S G ++ E++TGR
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSS--CSEQGNAEFTNEVLLILKLQH 409
+ N+ LG+G F V + V + G E A K +++ S + + E + KLQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N+V+L + LV++ + L D R + + + I++ I Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMN---PKISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
H + I+HR+LK N+LL K++DFG+A SE A GT GY++
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYLS 174
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIITG 554
PE + YS D+++ GV+L ++ G
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSS--CSEQGNAEFTNEVLLILKLQH 409
+ N+ LG+G F V + V + G E A K +++ S + + E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N+V+L + LV++ + L D R + + + I++ I Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNP---KISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
H + I+HR+LK N+LL K++DFG+A SE A GT GY++
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYLS 175
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIITG 554
PE + YS D+++ GV+L ++ G
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA-----EFTNEVLLILKLQHKNLVKLL 416
LG G FG V KG K + + + N E E ++ +L + +V+++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
G C + + +LV E L+ L R + I +V+ + G+ YL E +
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN--- 127
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGL 534
+HRDL A NVLL KISDFG+++ E A+ G + + APE
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN-YYKAQTHGKWPVKWYAPECINYYK 186
Query: 535 YSIKSDVFSFGVLLIEIIT 553
+S KSDV+SFGVL+ E +
Sbjct: 187 FSSKSDVWSFGVLMWEAFS 205
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 35/305 (11%)
Query: 338 KAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEF 397
KA I L+ D+ ++G+G FG VY G I + + +E F
Sbjct: 17 KASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAF 76
Query: 398 TNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN 457
EV+ + +H+N+V +G C+ ++ +L +++ D + +L +K
Sbjct: 77 KREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQ 134
Query: 458 IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR 517
I IVKG+ YLH I+H+DLK+ NV D + I+DFG+ I + +
Sbjct: 135 IAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDK 190
Query: 518 IVGTYGY---MAPEYAME---------GLYSIKSDVFSFGVLLIEIITGRRNTGFNQSRG 565
+ G+ +APE + +S SDVF+ G + E+ R F
Sbjct: 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA--REWPFKTQPA 248
Query: 566 ATAPNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHIGLLCVQEDAFDRPTMSSV 625
+W G + P L+ E I L C + +RPT + +
Sbjct: 249 EAI---------IWQMGTGM---KPNLSQIGMGKEI---SDILLFCWAFEQEERPTFTKL 293
Query: 626 VVMLQ 630
+ ML+
Sbjct: 294 MDMLE 298
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 ATSNFSDS----NMLGQGGFGPVYKGV-LSDGKEIAVKRLSS--CSEQGNAEFTNEVLLI 404
A++ FSD+ LG+G F V + V + G E A K +++ S + + E +
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
KLQH N+V+L + LV++ + L D R + + + I++
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILE 139
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNP---KISDFGMARIFAGSEGEVNTARIVGT 521
I Y H + I+HR+LK N+LL K++DFG+A SE A GT
Sbjct: 140 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GT 193
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
GY++PE + YS D+++ GV+L ++ G
Sbjct: 194 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 354 SNFSDSNMLGQGGFGPVY---KGVLSDGKEI---AVKRLSSCSEQGNAEFTNEVLLILKL 407
S F +LGQG FG V+ K SD +++ V + ++ + E +++++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 408 QHKNLVKL-LGFCVDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKG 465
H +VKL F +G KL L+ +F+ L L SK + VK
Sbjct: 84 NHPFIVKLHYAFQTEG--KLYLILDFLRGGDLFTRL-----------SKEVMFTEEDVKF 130
Query: 466 IL--------YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR 517
L +LH L II+RDLK N+LLD + + K++DFG+++ + E
Sbjct: 131 YLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYS 185
Query: 518 IVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
GT YMAPE ++ +D +SFGVL+ E++TG
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 17 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA-----EFTNEVLLILKLQHKNLVKLL 416
LG G FG V KG K + + + N E E ++ +L + +V+++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
G C + + +LV E L+ L R + I +V+ + G+ YL E +
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN--- 125
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY--GYMAPEYAMEGL 534
+HRDL A NVLL KISDFG+++ E A+ G + + APE
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN-YYKAQTHGKWPVKWYAPECINYYK 184
Query: 535 YSIKSDVFSFGVLLIEIIT 553
+S KSDV+SFGVL+ E +
Sbjct: 185 FSSKSDVWSFGVLMWEAFS 203
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 362 LGQGGFGPVYKGVL--SDGK--EIAVKRLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 414
LG G FG V +G GK +AVK L + +F EV + L H+NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L G + K+ V E P SL L + LL R + + +G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 134
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE--VNTARIVGTYGYMAPEYAME 532
R IHRDL A N+LL KI DFG+ R ++ + R V + + APE
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKT 192
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S SD + FGV L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 17 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 21 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 17 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 359 SNMLGQGGFGPVYKGVLSDG-KEIAVKRLS-------SCSEQGNA-EFTNEVLLILKLQH 409
S LG G G V K++A++ +S S E A E+ ++ KL H
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
++K+ F D ++ +V E M L D ++ + R + C ++ ++ + Y
Sbjct: 200 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLYFYQMLL-AVQY 254
Query: 469 LHEDSRLRIIHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGY 524
LHE+ IIHRDLK NVLL + D KI+DFG ++I GE + R + GT Y
Sbjct: 255 LHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTY 307
Query: 525 MAPEYAME---GLYSIKSDVFSFGVLLIEIITG-------RRNTGFNQSRGATAPNLLAY 574
+APE + Y+ D +S GV+L ++G R + N +
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 367
Query: 575 AWHLWNEGNALDLIDPLLT 593
W +E ALDL+ LL
Sbjct: 368 VWAEVSE-KALDLVKKLLV 385
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 19 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 78 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 21 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKIL 79
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 25 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 83
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 84 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 143
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 144 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 17 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
+G+G +G V+ G G+++AVK + +E+ + E+ + ++H+N++ + +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFT-TEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 422 GD----EKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED----- 472
G + L+ ++ N SL +D K L + + V G+ +LH +
Sbjct: 103 GTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA--RIVGTYGYMAPEYA 530
+ I HRDLK+ N+L+ + I+D G+A F EV+ VGT YM PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 531 MEGLYS------IKSDVFSFGVLLIEI 551
E L I +D++SFG++L E+
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 22 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 140
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 141 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 23 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 81
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 82 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 141
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 142 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 14 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 72
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 73 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 132
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 133 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 21 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 53/237 (22%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH-- 409
S+F + +LGQG FG V K + D + A+K++ E+ + +EV+L+ L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNHQY 63
Query: 410 -----------KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN- 457
+N VK + + E+ N +L +D L S+ +N
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL----YD------LIHSENLNQ 113
Query: 458 -------IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR------ 504
+ I++ + Y+H IIHRDLK N+ +D N KI DFG+A+
Sbjct: 114 QRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 505 --------IFAGSEGEVNTARIVGTYGYMAPEYA-MEGLYSIKSDVFSFGVLLIEII 552
GS + +A +GT Y+A E G Y+ K D++S G++ E+I
Sbjct: 171 DILKLDSQNLPGSSDNLTSA--IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 15/230 (6%)
Query: 330 VRGRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSS 388
V G + +K Q F DV ++ +G+G +G V K +A+K++S
Sbjct: 27 VPGEVEMVKGQPF-------DVG-PRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP 78
Query: 389 CSEQGNAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKR 447
Q + T E+ ++L+ +H+N++ + + + ++ ++ L+ K
Sbjct: 79 FEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS 138
Query: 448 GLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFA 507
L + I++G+ Y+H + ++HRDLK SN+L++ + KI DFG+ARI
Sbjct: 139 QQLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIAD 195
Query: 508 GSEGEVN-TARIVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
V T Y APE + Y+ D++S G +L E+++ R
Sbjct: 196 PEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 359 SNMLGQGGFGPVYKGVLSDG-KEIAVKRLS-------SCSEQGNA-EFTNEVLLILKLQH 409
S LG G G V K++A++ +S S E A E+ ++ KL H
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILY 468
++K+ F D ++ +V E M L D ++ + R + C ++ ++ + Y
Sbjct: 214 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLYFYQMLL-AVQY 268
Query: 469 LHEDSRLRIIHRDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTAR-IVGTYGY 524
LHE+ IIHRDLK NVLL + D KI+DFG ++I GE + R + GT Y
Sbjct: 269 LHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTY 321
Query: 525 MAPEYAME---GLYSIKSDVFSFGVLLIEIITG-------RRNTGFNQSRGATAPNLLAY 574
+APE + Y+ D +S GV+L ++G R + N +
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 381
Query: 575 AWHLWNEGNALDLIDPLLT 593
W +E ALDL+ LL
Sbjct: 382 VWAEVSE-KALDLVKKLLV 399
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 396 EFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL---DAILFDPRKRGLLCW 452
+F NE+ +I ++++ + G + DE ++YE+M N S+ D F + C+
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF-VLDKNYTCF 147
Query: 453 SKRINIVNGIVKGIL----YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAG 508
I ++ I+K +L Y+H + I HRD+K SN+L+D + K+SDFG +
Sbjct: 148 IP-IQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMV- 203
Query: 509 SEGEVNTARIVGTYGYMAPE-YAMEGLYS-IKSDVFSFGVLL 548
+ ++ +R GTY +M PE ++ E Y+ K D++S G+ L
Sbjct: 204 -DKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 37 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 155
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 15 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 133
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 134 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSS--CSEQGNAEFTNEVLLILKLQH 409
+ N+ LG+G F V + V + G E A K +++ S + + E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N+V+L + LV++ + L D R + + + I++ I Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNP---KISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
H + I+HR+LK N+LL K++DFG+A SE A GT GY++
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYLS 175
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIITG 554
PE + YS D+++ GV+L ++ G
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 15 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 133
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 134 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLI 404
+T+ + + + +G G +G V G +AVK+LS + +A+ T L +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 405 LK-LQHKNLVKLLGFCVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN 457
LK ++H+N++ LL ++ LV M + L+ I+ K L
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQF 125
Query: 458 IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR 517
++ I++G+ Y+H IIHRDLK SN+ ++ D KI DFG+AR + A
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAG 177
Query: 518 IVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
V T Y APE + + Y+ D++S G ++ E++TGR
Sbjct: 178 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 354 SNFSDSNMLGQGGFGPVY---KGVLSDGKEI---AVKRLSSCSEQGNAEFTNEVLLILKL 407
S F +LGQG FG V+ K SD +++ V + ++ + E +++++
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 408 QHKNLVKLLGFCVDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
H +VKL + + KL L+ +F+ L L SK + VK
Sbjct: 85 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-----------SKEVMFTEEDVKFY 132
Query: 467 L--------YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
L +LH L II+RDLK N+LLD + + K++DFG+++ + E
Sbjct: 133 LAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSF 187
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
GT YMAPE ++ +D +SFGVL+ E++TG
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 53/237 (22%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH-- 409
S+F + +LGQG FG V K + D + A+K++ E+ + +EV+L+ L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNHQY 63
Query: 410 -----------KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN- 457
+N VK + + E+ N +L +D L S+ +N
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL----YD------LIHSENLNQ 113
Query: 458 -------IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR------ 504
+ I++ + Y+H IIHRDLK N+ +D N KI DFG+A+
Sbjct: 114 QRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 505 --------IFAGSEGEVNTARIVGTYGYMAPEYA-MEGLYSIKSDVFSFGVLLIEII 552
GS + +A +GT Y+A E G Y+ K D++S G++ E+I
Sbjct: 171 DILKLDSQNLPGSSDNLTSA--IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 354 SNFSDSNMLGQGGFGPVY---KGVLSDGKEI---AVKRLSSCSEQGNAEFTNEVLLILKL 407
S F +LGQG FG V+ K SD +++ V + ++ + E +++++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 408 QHKNLVKLLGFCVDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
H +VKL + + KL L+ +F+ L L SK + VK
Sbjct: 84 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-----------SKEVMFTEEDVKFY 131
Query: 467 L--------YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
L +LH L II+RDLK N+LLD + + K++DFG+++ + E
Sbjct: 132 LAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSF 186
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
GT YMAPE ++ +D +SFGVL+ E++TG
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR + A V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 21 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 22 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 140
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 141 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR + A V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 362 LGQGGFGPVYKGVL--SDGK--EIAVKRLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 414
LG G FG V +G GK +AVK L + +F EV + L H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L G + K+ V E P SL L + LL R + + +G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE--VNTARIVGTYGYMAPEYAME 532
R IHRDL A N+LL KI DFG+ R ++ + R V + + APE
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLKT 188
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S SD + FGV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 362 LGQGGFGPVYKGVL--SDGK--EIAVKRLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 414
LG G FG V +G GK +AVK L + +F EV + L H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L G + K+ V E P SL L + LL R + + +G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE--VNTARIVGTYGYMAPEYAME 532
R IHRDL A N+LL KI DFG+ R ++ + R V + + APE
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKT 188
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S SD + FGV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSS--CSEQGNAEFTNEVLL 403
E DV +F +G+G FG V +D K++ A+K ++ C E+ + L
Sbjct: 8 ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQ 67
Query: 404 ILK-LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINI-VNG 461
I++ L+H LV L D ++ +V + + L L ++ + + + + +
Sbjct: 68 IMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLFICE 123
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
+V + YL RIIHRD+K N+LLD + I+DF +A + E + GT
Sbjct: 124 LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAGT 177
Query: 522 YGYMAPEY--AMEGL-YSIKSDVFSFGVLLIEIITGRR 556
YMAPE + +G YS D +S GV E++ GRR
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 362 LGQGGFGPVYKGVL--SDGK--EIAVKRLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 414
LG G FG V +G GK +AVK L + +F EV + L H+NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L G + K+ V E P SL L + LL R + + +G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 134
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE--VNTARIVGTYGYMAPEYAME 532
R IHRDL A N+LL KI DFG+ R ++ + R V + + APE
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKT 192
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S SD + FGV L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 362 LGQGGFGPVYKGVL--SDGK--EIAVKRLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 414
LG G FG V +G GK +AVK L + +F EV + L H+NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L G + K+ V E P SL L + LL R + + +G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 140
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE--VNTARIVGTYGYMAPEYAME 532
R IHRDL A N+LL KI DFG+ R ++ + R V + + APE
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKT 198
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S SD + FGV L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 362 LGQGGFGPVYKGVL--SDGK--EIAVKRLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 414
LG G FG V +G GK +AVK L + +F EV + L H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L G + K+ V E P SL L + LL R + + +G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE--VNTARIVGTYGYMAPEYAME 532
R IHRDL A N+LL KI DFG+ R ++ + R V + + APE
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKT 188
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S SD + FGV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 362 LGQGGFGPVYKGVL--SDGK--EIAVKRLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 414
LG G FG V +G GK +AVK L + +F EV + L H+NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L G + K+ V E P SL L + LL R + + +G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 140
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE--VNTARIVGTYGYMAPEYAME 532
R IHRDL A N+LL KI DFG+ R ++ + R V + + APE
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLKT 198
Query: 533 GLYSIKSDVFSFGVLLIEIIT 553
+S SD + FGV L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 21 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILR 139
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 19 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 362 LGQGGFGPVY--KGVLSDGKEIAVK--RLSSCSEQGNA-EFTNEVLLILKLQHKNLVKLL 416
LG G +G V K L+ G E A+K + SS + N+ +EV ++ +L H N++KL
Sbjct: 12 LGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 417 GFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRL 475
F D LV E L D I+ R I+ ++ G YLH+ +
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIIL----RQKFSEVDAAVIMKQVLSGTTYLHKHN-- 124
Query: 476 RIIHRDLKASNVLLD---YDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
I+HRDLK N+LL+ D KI DFG++ F E +GT Y+APE +
Sbjct: 125 -IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAPE-VLR 179
Query: 533 GLYSIKSDVFSFGVLLIEIITG 554
Y K DV+S GV+L ++ G
Sbjct: 180 KKYDEKCDVWSCGVILYILLCG 201
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A++++S Q + T E+ ++
Sbjct: 21 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKIL 79
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L+ +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 380 EIAVKRLSSCSEQGNAEFTNEVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL- 437
E AVK + ++ + T E+ ++L+ QH N++ L DG +V E M L
Sbjct: 49 EFAVKII----DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELL 104
Query: 438 DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVL-LDYDMNP- 495
D IL ++ + ++ I K + YLH ++HRDLK SN+L +D NP
Sbjct: 105 DKIL----RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPE 157
Query: 496 --KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+I DFG A+ G + T T ++APE Y D++S GVLL ++T
Sbjct: 158 SIRICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT 215
Query: 554 G 554
G
Sbjct: 216 G 216
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 353 TSNFSDSNMLGQGGFGPVY--KGVLSDGKEIAVK--RLSSCSEQGNA-EFTNEVLLILKL 407
+ + LG G +G V K L+ G E A+K + SS + N+ +EV ++ +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGI 466
H N++KL F D LV E L D I+ R I+ ++ G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL----RQKFSEVDAAVIMKQVLSGT 134
Query: 467 LYLHEDSRLRIIHRDLKASNVLLD---YDMNPKISDFGMARIFAGSEGEVNTARIVGTYG 523
YLH+ + I+HRDLK N+LL+ D KI DFG++ F E +GT
Sbjct: 135 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAY 188
Query: 524 YMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
Y+APE + Y K DV+S GV+L ++ G
Sbjct: 189 YIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 362 LGQGGFGPV-----YKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 416
LG+G FG V YK + ++L S+ + E+ + L+H +++KL
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDM-HMRVEREISYLKLLRHPHIIKLY 75
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
+ ++V E+ D I+ +KR +R I+ I Y H R +
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIV--EKKRMTEDEGRRF--FQQIICAIEYCH---RHK 128
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
I+HRDLK N+LLD ++N KI+DFG++ I + G+ Y APE LY+
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVINGKLYA 185
Query: 537 -IKSDVFSFGVLLIEIITGR 555
+ DV+S G++L ++ GR
Sbjct: 186 GPEVDVWSCGIVLYVMLVGR 205
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGK-EIAVKRLSSCSEQGNAEFT-NEVLLI 404
+ DV +++ + +G+G +G V + K +A+K++S Q + T E+ ++
Sbjct: 19 QVFDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 405 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
L +H+N++ + + + ++ ++ L+ K L + I++
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN-TARIVGTYG 523
G+ Y+H + ++HRDLK SN+LL+ + KI DFG+AR+ V T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 524 YMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
Y APE + Y+ D++S G +L E+++ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 362 LGQGGFGPVYKGVLSDGKE-IAVKRLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLGF 418
LG+G +G VYK + + E +A+KR+ E+ T EV L+ +LQH+N+++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRII 478
L++E+ N + +P + S ++NG+ + H SR R +
Sbjct: 102 IHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVN----FCH--SR-RCL 154
Query: 479 HRDLKASNVLL---DYDMNP--KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG 533
HRDLK N+LL D P KI DFG+AR F G T I+ T Y PE +
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEII-TLWYRPPEILLGS 212
Query: 534 L-YSIKSDVFSFGVLLIEII 552
YS D++S + E++
Sbjct: 213 RHYSTSVDIWSIACIWAEML 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLI 404
+T+ + + + +G G +G V G +AVK+LS + +A+ T L +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 405 LK-LQHKNLVKLLGFCVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN 457
LK ++H+N++ LL ++ LV M + L+ I+ K L
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV----KCAKLTDDHVQF 125
Query: 458 IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR 517
++ I++G+ Y+H IIHRDLK SN+ ++ D KI DFG+AR ++ E+
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG-- 177
Query: 518 IVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
V T Y APE + + Y+ D++S G ++ E++TGR
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 362 LGQGGFGPVYKGVLSDGKEI-AVKR--LSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G +G V+K + EI A+KR L E + E+ L+ +L+HKN+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD- 68
Query: 419 CVDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRI 477
+ D+KL LV+EF D + G L + + ++KG+ + H + +
Sbjct: 69 VLHSDKKLTLVFEF---CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 478 IHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG-LYS 536
+HRDLK N+L++ + K++DFG+AR F G +A +V T Y P+ LYS
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAF-GIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 537 IKSDVFSFGVLLIEIITGRR 556
D++S G + E+ R
Sbjct: 181 TSIDMWSAGCIFAELANAAR 200
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 20/219 (9%)
Query: 348 TLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILK 406
+++V + LG+G +G V K + G+ +AVKR+ + N++ +L+ L
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---NSQEQKRLLMDLD 57
Query: 407 LQHKNL-----VKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRI-NIVN 460
+ + + V G + + E M ++SLD +G + I
Sbjct: 58 ISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAV 116
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
IVK + +LH S+L +IHRD+K SNVL++ K+ DFG++ + A G
Sbjct: 117 SIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---G 171
Query: 521 TYGYMAPEYAMEGL----YSIKSDVFSFGVLLIEIITGR 555
YMAPE L YS+KSD++S G+ +IE+ R
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KXQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 345 DLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKE----IAVKRL--SSCSEQG-NAEF 397
D+ T +F LG+G FG VY L+ K+ +A+K L S ++G +
Sbjct: 14 DILTRHFTIDDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQL 70
Query: 398 TNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN 457
E+ + L H N+++L + D L+ E+ P L L +K +
Sbjct: 71 RREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTAT 127
Query: 458 IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR 517
I+ + ++Y H ++IHRD+K N+LL KI+DFG + + A S +
Sbjct: 128 IMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS-VHAPS---LRRKT 180
Query: 518 IVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
+ GT Y+ PE +++ K D++ GVL E++ G
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 41/261 (15%)
Query: 316 KIGDASKTGLR--YQHVRGRDDDLK----AQDFYIDLETLDVATSNFSDSNMLGQGGFGP 369
K+ DA G Y G +D+L A++FY + +++G+G
Sbjct: 60 KLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFY----------QKYDPKDVIGRGVSSV 109
Query: 370 VYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ---------HKNLVKLLGFC 419
V + V + G E AVK + +E+ + E EV + + H +++ L+
Sbjct: 110 VRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
LV++ M L L + + L + +I+ +++ + +LH ++ I+H
Sbjct: 170 ESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHANN---IVH 223
Query: 480 RDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL----- 534
RDLK N+LLD +M ++SDFG + E + GT GY+APE +
Sbjct: 224 RDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHP 280
Query: 535 -YSIKSDVFSFGVLLIEIITG 554
Y + D+++ GV+L ++ G
Sbjct: 281 GYGKEVDLWACGVILFTLLAG 301
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 354 SNFSDSNMLGQGGFGPVY---KGVLSD-GKEIAVKRL--SSCSEQGNAEFTNEVLLILKL 407
S+F +LGQG FG V+ K D G A+K L ++ + E ++ +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 408 QHKNLVKL-LGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK-- 464
H +VKL F +G + L+ +F+ L L SK + VK
Sbjct: 88 NHPFVVKLHYAFQTEG-KLYLILDFLRGGDLFTRL-----------SKEVMFTEEDVKFY 135
Query: 465 ------GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI 518
G+ +LH L II+RDLK N+LLD + + K++DFG+++ + E
Sbjct: 136 LAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSF 190
Query: 519 VGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
GT YMAPE +S +D +S+GVL+ E++TG
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
+ +G+ +L S + IHRDL A N+LL + KI DFG+AR + V
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+MAPE + +YS KSDV+S+GVLL EI +
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 359 SNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFT-NEVLLILKLQHKNLVKLL 416
S++LGQG V++G G A+K ++ S + E ++ KL HKN+VKL
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL- 72
Query: 417 GFCVDGD----EKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
F ++ + K+L+ EF P SL +L +P L S+ + ++ +V G+ +L E+
Sbjct: 73 -FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 473 SRLRIIHRDLKASNVLL----DYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
I+HR++K N++ D K++DFG AR E V+ + GT Y+ P+
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS---LYGTEEYLHPD 185
Query: 529 YAMEGL--------YSIKSDVFSFGVLLIEIITG 554
+ Y D++S GV TG
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 449 LLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAG 508
L+C+S ++ KG+ +L + + IHRDL A N+LL KI DFG+AR
Sbjct: 200 LICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 250
Query: 509 SEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
V +MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 251 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLI 404
+T+ + + + +G G +G V G +AVK+LS + +A+ T L +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 405 LK-LQHKNLVKLLGFCVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN 457
LK ++H+N++ LL ++ LV M + L+ I+ K L
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQF 125
Query: 458 IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR 517
++ I++G+ Y+H IIHRDLK SN+ ++ D KI DFG+AR ++ E+
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG-- 177
Query: 518 IVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
V T Y APE + + Y+ D++S G ++ E++TGR
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KXQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 449 LLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAG 508
L+C+S ++ KG+ +L + + IHRDL A N+LL KI DFG+AR
Sbjct: 202 LICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 252
Query: 509 SEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
V +MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 253 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 151 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 202
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQG---NAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G FG V++G G+E+AVK SS E+ AE V+L +H+N+ LGF
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LGF 88
Query: 419 CVDGDEK--------LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ D K LV ++ + SL FD R + I + G+ +LH
Sbjct: 89 -IAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLH 143
Query: 471 ED-----SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA--RIVGTYG 523
+ + I HRDLK+ N+L+ + I+D G+A + ++ A VGT
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 203
Query: 524 YMAPEYA-----MEGLYSIK-SDVFSFGVLLIEI 551
YMAPE M+ S K +D+++ G++ EI
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 31/207 (14%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILKL-QHKNLVKLL 416
+G G G V Y +L + +A+K+LS + Q +A+ L+++K+ HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAIL---FDPRKRGLLCWSKRINIVNGIVKGIL 467
+ + +V E M +++L ++ D + L + ++ GI
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQ--------MLVGIK 140
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART-AGTSF-MMTPYVVTRY-YRAP 194
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITG 554
E + Y D++S GV++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 449 LLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAG 508
L+C+S ++ KG+ +L + + IHRDL A N+LL KI DFG+AR
Sbjct: 195 LICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245
Query: 509 SEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
V +MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLSSCSEQG---NAEFTNEVLLILK 406
V ++ + LG G FG V G G ++AVK L+ + + E+ +
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 407 LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKG 465
+H +++KL + +V E++ L D I K G + + + I+
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC----KHGRVEEMEARRLFQQILSA 123
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE-VNTARIVGTYGY 524
+ Y H R ++HRDLK NVLLD MN KI+DFG++ + S+GE + T+ G+ Y
Sbjct: 124 VDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRTS--CGSPNY 176
Query: 525 MAPEYAMEGLYS-IKSDVFSFGVLLIEIITG 554
APE LY+ + D++S GV+L ++ G
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQG---NAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G FG V++G G+E+AVK SS E+ AE V+L +H+N+ LGF
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LGF 63
Query: 419 CVDGDEK--------LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ D K LV ++ + SL FD R + I + G+ +LH
Sbjct: 64 -IAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLH 118
Query: 471 ED-----SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA--RIVGTYG 523
+ + I HRDLK+ N+L+ + I+D G+A + ++ A VGT
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 524 YMAPEYA-----MEGLYSIK-SDVFSFGVLLIEI 551
YMAPE M+ S K +D+++ G++ EI
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 449 LLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAG 508
L+C+S ++ KG+ +L + + IHRDL A N+LL KI DFG+AR
Sbjct: 193 LICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 243
Query: 509 SEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
V +MAPE + +Y+I+SDV+SFGVLL EI +
Sbjct: 244 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLSSCSEQG---NAEFTNEVLLILK 406
V ++ + LG G FG V G G ++AVK L+ + + E+ +
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 407 LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKG 465
+H +++KL + +V E++ L D I K G + + + I+
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC----KHGRVEEMEARRLFQQILSA 123
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYM 525
+ Y H R ++HRDLK NVLLD MN KI+DFG++ + + E ++ G+ Y
Sbjct: 124 VDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYA 177
Query: 526 APEYAMEGLYS-IKSDVFSFGVLLIEIITG 554
APE LY+ + D++S GV+L ++ G
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 154
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 155 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 206
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQG---NAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G FG V++G G+E+AVK SS E+ AE V+L +H+N+ LGF
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LGF 68
Query: 419 CVDGDEK--------LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ D K LV ++ + SL FD R + I + G+ +LH
Sbjct: 69 -IAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLH 123
Query: 471 ED-----SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA--RIVGTYG 523
+ + I HRDLK+ N+L+ + I+D G+A + ++ A VGT
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 524 YMAPEYA-----MEGLYSIK-SDVFSFGVLLIEI 551
YMAPE M+ S K +D+++ G++ EI
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 150 D---IIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 201
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
LG G FG V++ + G A K + + E E+ + L+H LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 421 DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
D +E +++YEFM L + D + + + + + + KG+ ++HE++ +H
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHENN---YVHL 173
Query: 481 DLKASNVLLDYDMNP--KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIK 538
DLK N++ + K+ DFG+ A + + + GT + APE A
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLT---AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 230
Query: 539 SDVFSFGVLLIEIITG 554
+D++S GVL +++G
Sbjct: 231 TDMWSVGVLSYILLSG 246
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 31/207 (14%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILKL-QHKNLVKLL 416
+G G G V Y +L + +A+K+LS + Q +A+ L+++K+ HKN++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAIL---FDPRKRGLLCWSKRINIVNGIVKGIL 467
+ + +V E M +++L ++ D + L + ++ GI
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQ--------MLVGIK 140
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART-AGTSF-MMTPYVVTRY-YRAP 194
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITG 554
E + Y D++S GV++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 359 SNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFT-NEVLLILKLQHKNLVKLL 416
S++LGQG V++G G A+K ++ S + E ++ KL HKN+VKL
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL- 72
Query: 417 GFCVDGD----EKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
F ++ + K+L+ EF P SL +L +P L S+ + ++ +V G+ +L E+
Sbjct: 73 -FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 473 SRLRIIHRDLKASNVLL----DYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPE 528
I+HR++K N++ D K++DFG AR E V + GT Y+ P+
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX---LYGTEEYLHPD 185
Query: 529 YAMEGL--------YSIKSDVFSFGVLLIEIITG 554
+ Y D++S GV TG
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQG---NAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G FG V++G G+E+AVK SS E+ AE V+L +H+N+ LGF
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LGF 62
Query: 419 CVDGDEK--------LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ D K LV ++ + SL FD R + I + G+ +LH
Sbjct: 63 -IAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLH 117
Query: 471 ED-----SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA--RIVGTYG 523
+ + I HRDLK+ N+L+ + I+D G+A + ++ A VGT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 524 YMAPEYA-----MEGLYSIK-SDVFSFGVLLIEI 551
YMAPE M+ S K +D+++ G++ EI
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 150 D---IIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 201
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 356 FSDSNMLGQGGFGPVYK----GVLSDGKEIAVKRLSSCSEQGNAEFTN----EVLLILKL 407
F +LG+GG+G V++ + GK A+K L NA+ T E ++ ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H +V L+ G + L+ E++ L L + G+ + I +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMALG 135
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH+ II+RDLK N++L++ + K++DFG+ + + +G V T GT YMAP
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTV-THXFCGTIEYMAP 190
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITG 554
E M ++ D +S G L+ +++TG
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQG---NAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G FG V++G G+E+AVK SS E+ AE V+L +H+N+ LGF
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LGF 65
Query: 419 CVDGDEK--------LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ D K LV ++ + SL FD R + I + G+ +LH
Sbjct: 66 -IAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLH 120
Query: 471 ED-----SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA--RIVGTYG 523
+ + I HRDLK+ N+L+ + I+D G+A + ++ A VGT
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 524 YMAPEYA-----MEGLYSIK-SDVFSFGVLLIEI 551
YMAPE M+ S K +D+++ G++ EI
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQG---NAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G FG V++G G+E+AVK SS E+ AE V+L +H+N+ LGF
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LGF 101
Query: 419 CVDGDEK--------LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ D K LV ++ + SL FD R + I + G+ +LH
Sbjct: 102 -IAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLH 156
Query: 471 ED-----SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTA--RIVGTYG 523
+ + I HRDLK+ N+L+ + I+D G+A + ++ A VGT
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 524 YMAPEYA-----MEGLYSIK-SDVFSFGVLLIEI 551
YMAPE M+ S K +D+++ G++ EI
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR A V T Y APE +
Sbjct: 152 D---IIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRWYRAPEIMLN 203
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 420
LG G FG V++ + G A K + + E E+ + L+H LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 421 DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHR 480
D +E +++YEFM L + D + + + + + + KG+ ++HE++ +H
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHENN---YVHL 279
Query: 481 DLKASNVLLDYDMNP--KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIK 538
DLK N++ + K+ DFG+ A + + + GT + APE A
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLT---AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 336
Query: 539 SDVFSFGVLLIEIITG 554
+D++S GVL +++G
Sbjct: 337 TDMWSVGVLSYILLSG 352
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR A V T Y APE +
Sbjct: 152 D---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLN 203
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 356 FSDSNMLGQGGFGPVYK----GVLSDGKEIAVKRLSSCSEQGNAEFTN----EVLLILKL 407
F +LG+GG+G V++ + GK A+K L NA+ T E ++ ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H +V L+ G + L+ E++ L L + G+ + I +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMALG 135
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH+ II+RDLK N++L++ + K++DFG+ + + +G V T GT YMAP
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTV-THTFCGTIEYMAP 190
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITG 554
E M ++ D +S G L+ +++TG
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGX--VATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 356 FSDSNMLGQGGFGPVYKGVLSDGKEI--AVKRLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
++ N +G+G +G V K + G I A K++ + F E+ ++ L H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
+L D + LV E L + R + S I+ ++ + Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCH--- 123
Query: 474 RLRIIHRDLKASNVLL--DYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
+L + HRDLK N L D +P K+ DFG+A F G++ + VGT Y++P+
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTK-VGTPYYVSPQ-V 179
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+EGLY + D +S GV++ ++ G
Sbjct: 180 LEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 165 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 216
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 163
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 164 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 215
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR A V T Y APE +
Sbjct: 152 D---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLN 203
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 165 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGX--VATRWYRAPEIMLN 216
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 31/255 (12%)
Query: 316 KIGDASKTGLRYQHVRGRDDD-----LKAQDFYIDLETLD--VATSNFSDSNMLGQGGFG 368
K+ + K G+R V + D + +D Y T D + +G+G FG
Sbjct: 345 KLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFG 404
Query: 369 PVYKGVL----SDGKEIAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGD 423
V++G+ + +A+K +C S+ +F E L + + H ++VKL+G + +
Sbjct: 405 DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 463
Query: 424 EKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLK 483
++ E L + L RK L S I + + YL R +HRD+
Sbjct: 464 PVWIIMELCTLGELRSFL-QVRKFSLDLAS-LILYAYQLSTALAYLESK---RFVHRDIA 518
Query: 484 ASNVLLDYDMNPKISDFGMAR------IFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSI 537
A NVL+ + K+ DFG++R + S+G++ +MAPE ++
Sbjct: 519 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-------WMAPESINFRRFTS 571
Query: 538 KSDVFSFGVLLIEII 552
SDV+ FGV + EI+
Sbjct: 572 ASDVWMFGVCMWEIL 586
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 356 FSDSNMLGQGGFGPVYKGVLSDGKEI--AVKRLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
++ N +G+G +G V K + G I A K++ + F E+ ++ L H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
+L D + LV E L + R + S I+ ++ + Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCH--- 140
Query: 474 RLRIIHRDLKASNVLL--DYDMNP-KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
+L + HRDLK N L D +P K+ DFG+A F G++ + VGT Y++P+
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTK-VGTPYYVSPQ-V 196
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+EGLY + D +S GV++ ++ G
Sbjct: 197 LEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLL 416
+G G +G V Y L +++AVK+LS + +A T L +LK L+H+N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
D E LV M + L+ I+ K L +V +++G+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM-GADLNNIV----KSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SNV ++ D +I DFG+AR + + V T Y APE
Sbjct: 149 SAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIM 200
Query: 531 MEGL-YSIKSDVFSFGVLLIEIITGR 555
+ + Y+ D++S G ++ E++ G+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 150 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 201
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 152 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 203
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 150 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 201
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 143
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 144 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 195
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLI 404
+T+ + + + +G G +G V G +AVK+LS + +A+ T L +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 405 LK-LQHKNLVKLLGFCVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN 457
LK ++H+N++ LL ++ LV M + L+ I+ K L
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQF 125
Query: 458 IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR 517
++ I++G+ Y+H IIHRDLK SN+ ++ D KI DFG+AR ++ E+
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG-- 177
Query: 518 IVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
V T Y APE + + Y+ D++S G ++ E++TGR
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 362 LGQGGFGPVYK-GVLSDGKEIAVK----RLSSCSEQG--NAEFTNEVLLILKLQHKNLVK 414
LG G F V K GKE A K R S S +G E EV ++ +++H N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L + + +L+ E + L L + L + + I+ G+ YLH
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSK-- 134
Query: 475 LRIIHRDLKASNV-LLDYDM-NPKIS--DFGMA-RIFAGSEGEVNTARIVGTYGYMAPEY 529
RI H DLK N+ LLD ++ NP+I DFG+A +I AG+E I GT ++APE
Sbjct: 135 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE----FKNIFGTPEFVAPEI 189
Query: 530 AMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLI 404
+T+ + + + +G G +G V G +AVK+LS + +A+ T L +
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 405 LK-LQHKNLVKLLGFCVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN 457
LK ++H+N++ LL ++ LV M + L+ I+ K L
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQF 126
Query: 458 IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR 517
++ I++G+ Y+H IIHRDLK SN+ ++ D KI DFG+AR ++ E+
Sbjct: 127 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG-- 178
Query: 518 IVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
V T Y APE + + Y+ D++S G ++ E++TGR
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 141
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 142 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 193
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 147 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 198
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 147 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 198
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 157 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 208
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLI 404
+T+ + + + +G G +G V G +AVK+LS + +A+ T L +
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 405 LK-LQHKNLVKLLGFCVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN 457
LK ++H+N++ LL ++ LV M + L+ I+ K L
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQF 127
Query: 458 IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR 517
++ I++G+ Y+H IIHRDLK SN+ ++ D KI DFG+AR ++ E+
Sbjct: 128 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG-- 179
Query: 518 IVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITGR 555
V T Y APE + + Y+ D++S G ++ E++TGR
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 155
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 156 D---IIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 207
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 151 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 202
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 362 LGQGGFGPVYKGVLSD--------GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
LGQG F ++KGV + E+ +K L + F ++ KL HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
G CV GDE +LV EF+ SLD L + + W ++ + + + +L E++
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLEENT 133
Query: 474 RLRIIHRDLKASNVLLDYDMNPKISDFGMARIF-AGSEGEVNTARIVGTYGYMAPEYAME 532
+IH ++ A N+LL + + K + ++ G V I+ P +E
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 533 GL--YSIKSDVFSFGVLLIEIITG 554
++ +D +SFG L EI +G
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 362 LGQGGFGPVYK-GVLSDGKEIAVK----RLSSCSEQG--NAEFTNEVLLILKLQHKNLVK 414
LG G F V K GKE A K R S S +G E EV ++ +++H N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L + + +L+ E + L L + L + + I+ G+ YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSK-- 127
Query: 475 LRIIHRDLKASNV-LLDYDM-NPKIS--DFGMA-RIFAGSEGEVNTARIVGTYGYMAPEY 529
RI H DLK N+ LLD ++ NP+I DFG+A +I AG+E I GT ++APE
Sbjct: 128 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE----FKNIFGTPEFVAPEI 182
Query: 530 AMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 147 D---IIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 198
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 157 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 208
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 147 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 198
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 157 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 208
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 105/236 (44%), Gaps = 37/236 (15%)
Query: 338 KAQDFYIDLETLDVATSNFSDSNML------GQGGFGPVYKGVLSDGK------EIAVKR 385
+ QD +LET V SN D L G+G F VYKG+ ++ E+ ++
Sbjct: 6 QQQDDIEELETKAVGXSN--DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK 63
Query: 386 LSSCSEQGNAEFTNEVLLILKLQHKNLVKL---LGFCVDGDE-KLLVYEFMPNSSLDAIL 441
L+ Q F E + LQH N+V+ V G + +LV E + +L L
Sbjct: 64 LTKSERQ---RFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYL 120
Query: 442 --FDPRK-RGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KI 497
F K + L W ++I +KG+ +LH + IIHRDLK N+ + KI
Sbjct: 121 KRFKVXKIKVLRSWCRQI------LKGLQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKI 173
Query: 498 SDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
D G+A + S + ++GT + APE E Y DV++FG +E T
Sbjct: 174 GDLGLATLKRASFAKA----VIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXAT 224
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQG---NAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G +G V++G G+ +AVK SS E+ E N V+L +H+N++ +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 99
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH-----EDS 473
+ + + L+D + L + IV I G+ +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 159
Query: 474 RLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV---NTARIVGTYGYMAPEYA 530
+ I HRDLK+ N+L+ + I+D G+A + + S ++ N R VGT YMAPE
Sbjct: 160 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGTKRYMAPEVL 218
Query: 531 MEGLYS------IKSDVFSFGVLLIEI 551
E + + D+++FG++L E+
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 151 D---IIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 202
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLIL 405
+T+++ +L +GGF VY+ + G+E A+KRL S E+ N EV +
Sbjct: 21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMK 80
Query: 406 KLQ-HKNLVKLLGFCVDGDEK--------LLVYEFMPNSSLDAILFDPRKRGLLCWSKRI 456
KL H N+V+ G E+ LL+ E L L RG L +
Sbjct: 81 KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVL 139
Query: 457 NIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMA 503
I + + ++H + IIHRDLK N+LL K+ DFG A
Sbjct: 140 KIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 380 EIAVKRLSSCSEQGNAEFTNEVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL- 437
E AVK + ++ + T E+ ++L+ QH N++ L DG +V E L
Sbjct: 49 EFAVKII----DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELL 104
Query: 438 DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVL-LDYDMNP- 495
D IL ++ + ++ I K + YLH ++HRDLK SN+L +D NP
Sbjct: 105 DKIL----RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPE 157
Query: 496 --KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIIT 553
+I DFG A+ G + T T ++APE Y D++S GVLL +T
Sbjct: 158 SIRICDFGFAKQLRAENGLLXTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLT 215
Query: 554 G 554
G
Sbjct: 216 G 216
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 359 SNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ-HKNLVKLL 416
S +LG+G + V V L +GKE AVK + + + EV + + Q +KN+++L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
F D LV+E + S IL +K+ + +V + + +LH
Sbjct: 78 EFFEDDTRFYLVFEKLQGGS---ILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG--- 131
Query: 477 IIHRDLKASNVLLD--YDMNP-KISDF--GMARIFAGSEGEVNTARIV---GTYGYMAPE 528
I HRDLK N+L + ++P KI DF G S + T + G+ YMAPE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 529 YA-----MEGLYSIKSDVFSFGVLLIEIITG 554
Y + D++S GV+L +++G
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 362 LGQGGFGPVYKGVLSDGKEI-AVKR--LSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G +G V+K + EI A+KR L E + E+ L+ +L+HKN+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD- 68
Query: 419 CVDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRI 477
+ D+KL LV+EF D + G L + + ++KG+ + H + +
Sbjct: 69 VLHSDKKLTLVFEF---CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 478 IHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG-LYS 536
+HRDLK N+L++ + K+++FG+AR F G +A +V T Y P+ LYS
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 537 IKSDVFSFGVLLIEIITGRR 556
D++S G + E+ R
Sbjct: 181 TSIDMWSAGCIFAELANAGR 200
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 151 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 202
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 362 LGQGGFGPVYKGV--LSDGKEIAVKRLSSCSEQGNA-EFTNEVLLILKLQHKNLVKLLGF 418
LG+G + VYKG L+D +A+K + E+G EV L+ L+H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVN---------GIVKGILYL 469
LV+E++ + L L D C NI+N +++G+ Y
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDD-------CG----NIINMHNVKLFLFQLLRGLAYC 116
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEY 529
H R +++HRDLK N+L++ K++DFG+AR A S V T Y P+
Sbjct: 117 H---RQKVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDI 171
Query: 530 AMEGL-YSIKSDVFSFGVLLIEIITGR 555
+ YS + D++ G + E+ TGR
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 31/255 (12%)
Query: 316 KIGDASKTGLRYQHVRGRDDD-----LKAQDFYIDLETLD--VATSNFSDSNMLGQGGFG 368
K+ + K G+R V + D + +D Y T D + +G+G FG
Sbjct: 345 KLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFG 404
Query: 369 PVYKGVL----SDGKEIAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGD 423
V++G+ + +A+K +C S+ +F E L + + H ++VKL+G + +
Sbjct: 405 DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 463
Query: 424 EKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLK 483
++ E L + L RK L S I + + YL R +HRD+
Sbjct: 464 PVWIIMELCTLGELRSFL-QVRKFSLDLAS-LILYAYQLSTALAYLESK---RFVHRDIA 518
Query: 484 ASNVLLDYDMNPKISDFGMAR------IFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSI 537
A NVL+ K+ DFG++R + S+G++ +MAPE ++
Sbjct: 519 ARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-------WMAPESINFRRFTS 571
Query: 538 KSDVFSFGVLLIEII 552
SDV+ FGV + EI+
Sbjct: 572 ASDVWMFGVCMWEIL 586
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 155
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 156 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 207
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQG---NAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G +G V++G G+ +AVK SS E+ E N V+L +H+N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH-----EDS 473
+ + + L+D + L + IV I G+ +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 474 RLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV---NTARIVGTYGYMAPEYA 530
+ I HRDLK+ N+L+ + I+D G+A + + S ++ N R VGT YMAPE
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGTKRYMAPEVL 189
Query: 531 MEGLYS------IKSDVFSFGVLLIEI 551
E + + D+++FG++L E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 163
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 164 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 215
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQG---NAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G +G V++G G+ +AVK SS E+ E N V+L +H+N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH-----EDS 473
+ + + L+D + L + IV I G+ +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 474 RLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEV---NTARIVGTYGYMAPEYA 530
+ I HRDLK+ N+L+ + I+D G+A + + S ++ N R VGT YMAPE
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGTKRYMAPEVL 189
Query: 531 MEGLYS------IKSDVFSFGVLLIEI 551
E + + D+++FG++L E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 167
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 168 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXG--YVATRWYRAPEIMLN 219
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 165 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 216
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 362 LGQGGFGPVYKGVL----SDGKEIAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 416
+G+G FG V++G+ + +A+K +C S+ +F E L + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
G + + ++ E L + L RK L + I + + YL R
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL-QVRKYSLDL-ASLILYAYQLSTALAYLESK---R 131
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMAR------IFAGSEGEVNTARIVGTYGYMAPEYA 530
+HRD+ A NVL+ + K+ DFG++R + S+G++ +MAPE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-------WMAPESI 184
Query: 531 MEGLYSIKSDVFSFGVLLIEII 552
++ SDV+ FGV + EI+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKE----IAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 416
+G+G FG V++G+ + +A+K +C S+ +F E L + + H ++VKL+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
G + + ++ E L + L RK L + I + + YL R
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFL-QVRKYSLDL-ASLILYAYQLSTALAYLESK---R 159
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMAR------IFAGSEGEVNTARIVGTYGYMAPEYA 530
+HRD+ A NVL+ + K+ DFG++R + S+G++ +MAPE
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-------WMAPESI 212
Query: 531 MEGLYSIKSDVFSFGVLLIEII 552
++ SDV+ FGV + EI+
Sbjct: 213 NFRRFTSASDVWMFGVCMWEIL 234
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 167
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+AR ++ E+ V T Y APE +
Sbjct: 168 D---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 219
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLL 416
+G G +G V Y L +++AVK+LS + +A T L +LK L+H+N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
D E LV M + L+ I+ K L +V +++G+ Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM-GADLNNIV----KCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SNV ++ D +I DFG+AR + + V T Y APE
Sbjct: 141 SAG---IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRAPEIM 192
Query: 531 MEGL-YSIKSDVFSFGVLLIEIITGR 555
+ + Y+ D++S G ++ E++ G+
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 35/213 (16%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQG---NAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G +G V++G L G+ +AVK SS EQ E N VLL +H N+ LGF
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLL----RHDNI---LGF 67
Query: 419 CVD-------GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHE 471
+ L+ + + SL +D +R L + + G+ +LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSL----YDFLQRQTLEPHLALRLAVSAACGLAHLHV 123
Query: 472 D-----SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFA-GSEG-EVNTARIVGTYGY 524
+ + I HRD K+ NVL+ ++ I+D G+A + + GS+ ++ VGT Y
Sbjct: 124 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRY 183
Query: 525 MAPEYAMEGLYS------IKSDVFSFGVLLIEI 551
MAPE E + + +D+++FG++L EI
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKE----IAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 416
+G+G FG V++G+ + +A+K +C S+ +F E L + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
G + + ++ E L + L RK L + I + + YL R
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL-QVRKYSLDL-ASLILYAYQLSTALAYLESK---R 131
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMAR------IFAGSEGEVNTARIVGTYGYMAPEYA 530
+HRD+ A NVL+ + K+ DFG++R + S+G++ +MAPE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-------WMAPESI 184
Query: 531 MEGLYSIKSDVFSFGVLLIEII 552
++ SDV+ FGV + EI+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 398 TNEVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKR 455
+ E+ ++L+ QH N++ L DG LV E M L D IL ++ +
Sbjct: 68 SEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREA 123
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVL-LDYDMNP---KISDFGMARIFAGSEG 511
+++ I K + YLH ++HRDLK SN+L +D NP +I DFG A+ G
Sbjct: 124 SFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG 180
Query: 512 EVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
+ T T ++APE Y D++S G+LL ++ G
Sbjct: 181 LLMTP--CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 349 LDVATSNFSDSNM------LGQGGFGPVYKGV-LSDGKEIAVKRLSS--CSEQGNAEFTN 399
+D+ T N +M LG+G F V + V + G+E A K +++ S + + +
Sbjct: 11 VDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER 70
Query: 400 EVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIV 459
E + L+H N+V+L + L+++ + L D R + + +
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCI 127
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP---KISDFGMARIFAGSEGEVNTA 516
I++ +L+ H+ + ++HRDLK N+LL + K++DFG+A EGE
Sbjct: 128 QQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAW 181
Query: 517 -RIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
GT GY++PE + Y D+++ GV+L ++ G
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 340 QDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKE----IAVKRLSSC-SEQGN 394
+D+ I E +++ +G+G FG V++G+ + +A+K +C S+
Sbjct: 8 RDYEIQRERIELG-------RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 60
Query: 395 AEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSK 454
+F E L + + H ++VKL+G + + ++ E L + L RK L +
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL-QVRKYSLDL-AS 117
Query: 455 RINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR------IFAG 508
I + + YL R +HRD+ A NVL+ + K+ DFG++R +
Sbjct: 118 LILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 174
Query: 509 SEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEII 552
S+G++ +MAPE ++ SDV+ FGV + EI+
Sbjct: 175 SKGKLPIK-------WMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 45/226 (19%)
Query: 351 VATSNFSDSNMLGQGGFGP-VYKGVLSDGKEIAVKR-LSSCSEQGNAEFTNEVLLILKLQ 408
V +F ++LG G G VY+G+ D +++AVKR L C + E LL +
Sbjct: 21 VGKISFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQ---LLRESDE 76
Query: 409 HKNLVKLLGFCVDGDEKL----------LVYEFMPNSSLDAILFDPRKRGLLCWSKRINI 458
H N+++ FC + D + + E++ + +P I +
Sbjct: 77 HPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP-----------ITL 123
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDY-----DMNPKISDFGMARIFA-GSEGE 512
+ G+ +LH L I+HRDLK N+L+ + ISDFG+ + A G
Sbjct: 124 LQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180
Query: 513 VNTARIVGTYGYMAPEYAME-----GLYSIKSDVFSFGVLLIEIIT 553
+ + GT G++APE E Y++ D+FS G + +I+
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTV--DIFSAGCVFYYVIS 224
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKE----IAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 416
+G+G FG V++G+ + +A+K +C S+ +F E L + + H ++VKL+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
G + + ++ E L + L RK L + I + + YL R
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFL-QVRKYSLDL-ASLILYAYQLSTALAYLESK---R 133
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMAR------IFAGSEGEVNTARIVGTYGYMAPEYA 530
+HRD+ A NVL+ + K+ DFG++R + S+G++ +MAPE
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-------WMAPESI 186
Query: 531 MEGLYSIKSDVFSFGVLLIEII 552
++ SDV+ FGV + EI+
Sbjct: 187 NFRRFTSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 340 QDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKE----IAVKRLSSC-SEQGN 394
+D+ I E +++ +G+G FG V++G+ + +A+K +C S+
Sbjct: 6 RDYEIQRERIELG-------RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 58
Query: 395 AEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSK 454
+F E L + + H ++VKL+G + + ++ E L + L RK L +
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL-QVRKYSLDL-AS 115
Query: 455 RINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR------IFAG 508
I + + YL R +HRD+ A NVL+ + K+ DFG++R +
Sbjct: 116 LILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 172
Query: 509 SEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEII 552
S+G++ +MAPE ++ SDV+ FGV + EI+
Sbjct: 173 SKGKLPIK-------WMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 25/204 (12%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V + VL G +AVK+LS + Q +A+ L++LK + HKN++ LL
Sbjct: 30 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ + LV E M + I + L + ++ ++ GI +LH
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMDANLCQVIHME------LDHERMSYLLYQMLCGIKHLH 141
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SN+++ D KI DFG+AR S + T +V Y Y APE
Sbjct: 142 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRY-YRAPEVI 195
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y D++S G ++ E++ G
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 31/224 (13%)
Query: 348 TLDVATSNFS------DSNMLGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEF 397
+++VA S F+ +G G G V + VL G +AVK+LS + Q +A+
Sbjct: 12 SVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKR 69
Query: 398 TNEVLLILK-LQHKNLVKLLGFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLL 450
L++LK + HKN++ LL + + LV E M + I + L
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME------L 123
Query: 451 CWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE 510
+ ++ ++ GI +LH IIHRDLK SN+++ D KI DFG+AR
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TACT 178
Query: 511 GEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
+ T +V Y Y APE + Y+ D++S G ++ E++ G
Sbjct: 179 NFMMTPYVVTRY-YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 398 TNEVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKR 455
+ E+ ++L+ QH N++ L DG LV E M L D IL ++ +
Sbjct: 68 SEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREA 123
Query: 456 INIVNGIVKGILYLHEDSRLRIIHRDLKASNVL-LDYDMNP---KISDFGMARIFAGSEG 511
+++ I K + YLH ++HRDLK SN+L +D NP +I DFG A+ G
Sbjct: 124 SFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG 180
Query: 512 EVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
+ T T ++APE Y D++S G+LL ++ G
Sbjct: 181 LLMTP--CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KSQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DFG+ R ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKE----IAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 416
+G+G FG V++G+ + +A+K +C S+ +F E L + + H ++VKL+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
G + + ++ E L + L RK L + I + + YL R
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFL-QVRKYSLDL-ASLILYAYQLSTALAYLESK---R 128
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMAR------IFAGSEGEVNTARIVGTYGYMAPEYA 530
+HRD+ A NVL+ + K+ DFG++R + S+G++ +MAPE
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-------WMAPESI 181
Query: 531 MEGLYSIKSDVFSFGVLLIEII 552
++ SDV+ FGV + EI+
Sbjct: 182 NFRRFTSASDVWMFGVCMWEIL 203
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 362 LGQGGFGPVYKGVL----SDGKEIAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 416
+G+G FG V++G+ + +A+K +C S+ +F E L + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
G + + ++ E L + L RK L + I + + YL R
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL-QVRKFSLDL-ASLILYAYQLSTALAYLESK---R 131
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
+HRD+ A NVL+ + K+ DFG++R S ++ +MAPE ++
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TXXKASKGKLPIKWMAPESINFRRFT 190
Query: 537 IKSDVFSFGVLLIEII 552
SDV+ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLL 416
+G G +G V Y L +++AVK+LS + +A T L +LK L+H+N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
D E LV M + L+ I+ K L +V +++G+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM-GADLNNIV----KCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SNV ++ D +I DFG+AR + + V T Y APE
Sbjct: 149 SAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIM 200
Query: 531 MEGL-YSIKSDVFSFGVLLIEIITGR 555
+ + Y+ D++S G ++ E++ G+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 30/222 (13%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNL 412
S + D LG GG G V+ V +D K +A+K++ Q E+ +I +L H N+
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 413 VKL--------------LGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINI 458
VK+ +G + + +V E+M + L +L ++G L
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL----EQGPLLEEHARLF 125
Query: 459 VNGIVKGILYLHEDSRLRIIHRDLKASNVLLDY-DMNPKISDFGMARIF---AGSEGEVN 514
+ +++G+ Y+H + ++HRDLK +N+ ++ D+ KI DFG+ARI +G ++
Sbjct: 126 MYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 515 TARIVGTYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGR 555
+ T Y +P + Y+ D+++ G + E++TG+
Sbjct: 183 EGLV--TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI D+G+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 31/208 (14%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V Y VL + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAIL---FDPRKRGLLCWSKRINIVNGIVKGIL 467
+ + LV E M +++L ++ D + L + ++ GI
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQ--------MLXGIK 140
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAP 194
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E + Y D++S G ++ E++ +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 31/208 (14%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFT-NEVLLILKLQHKNLVKLL 416
+G G G V Y VL + +A+K+LS + Q +A+ E++L+ + HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAIL---FDPRKRGLLCWSKRINIVNGIVKGIL 467
+ + LV E M +++L ++ D + L + ++ GI
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQ--------MLXGIK 140
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAP 194
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E + Y D++S G ++ E++ +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 31/208 (14%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V Y VL + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAIL---FDPRKRGLLCWSKRINIVNGIVKGIL 467
+ + LV E M +++L ++ D + L + ++ GI
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQ--------MLXGIK 133
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y AP
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAP 187
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E + Y D++S G ++ E++ +
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 31/207 (14%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILKL-QHKNLVKLL 416
+G G G V Y +L + +A+K+LS + Q +A+ L+++K+ HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAIL---FDPRKRGLLCWSKRINIVNGIVKGIL 467
+ + +V E M +++L ++ D + L + ++ GI
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQ--------MLVGIK 140
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART-AGTSF-MMTPYVVTRY-YRAP 194
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITG 554
E + Y D++S G ++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 26/231 (11%)
Query: 336 DLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYK-GVLSDGKEIAVK----RLSSCS 390
DL ++ Y + ++ LG G F V K GKE A K R S
Sbjct: 12 DLGTENLYFQ----SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSS 67
Query: 391 EQG--NAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRG 448
+G E EV ++ +++H N++ L + + +L+ E + L L +
Sbjct: 68 RRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-- 125
Query: 449 LLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNV-LLDYDM-NPKIS--DFGMA- 503
L + + I+ G+ YLH RI H DLK N+ LLD ++ NP+I DFG+A
Sbjct: 126 -LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 181
Query: 504 RIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
+I AG+E I GT ++APE +++D++S GV+ +++G
Sbjct: 182 KIEAGNE----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 24/202 (11%)
Query: 362 LGQGGFGPVYKGVL----SDGKEIAVKRLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 416
+G+G FG V++G+ + +A+K +C S+ +F E L + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
G + + ++ E L + L RK L + I + + YL R
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL-QVRKFSLDL-ASLILYAYQLSTALAYLESK---R 131
Query: 477 IIHRDLKASNVLLDYDMNPKISDFGMAR------IFAGSEGEVNTARIVGTYGYMAPEYA 530
+HRD+ A NVL+ K+ DFG++R + S+G++ +MAPE
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-------WMAPESI 184
Query: 531 MEGLYSIKSDVFSFGVLLIEII 552
++ SDV+ FGV + EI+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 359 SNMLGQGGFGPVYKGVLSDGKEIAVKR--------LSSCSEQGNAEFTNEVLLILKLQHK 410
++LG+G +G V K VL E +R G A E+ L+ +L+HK
Sbjct: 10 GDLLGEGSYGKV-KEVLDS--ETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 411 NLVKLLGFCVDGDEKLLVYEFMP------NSSLDAILFDPRKRGLLCWSKRINIVNGIVK 464
N+++L+ + +EK +Y M LD++ P KR +C + ++
Sbjct: 67 NVIQLVDVLYN-EEKQKMYMVMEYCVCGMQEMLDSV---PEKRFPVCQAH--GYFCQLID 120
Query: 465 GILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGY 524
G+ YLH I+H+D+K N+LL KIS G+A + G+ +
Sbjct: 121 GLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 525 MAPEYA--MEGLYSIKSDVFSFGVLLIEIITG 554
PE A ++ K D++S GV L I TG
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR--IFAGSEGEVNTARIV 519
I G+ +L II+RDLK NV+LD + + KI+DFGM + I+ G V T
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFC 503
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
GT Y+APE Y D ++FGVLL E++ G+
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 53/237 (22%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQH-- 409
S+F + +LGQG FG V K + D + A+K++ E+ + +EV L+ L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVXLLASLNHQY 63
Query: 410 -----------KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN- 457
+N VK + E+ N +L +D L S+ +N
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL----YD------LIHSENLNQ 113
Query: 458 -------IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR------ 504
+ I++ + Y+H IIHR+LK N+ +D N KI DFG+A+
Sbjct: 114 QRDEYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 505 --------IFAGSEGEVNTARIVGTYGYMAPEYA-MEGLYSIKSDVFSFGVLLIEII 552
GS + +A +GT Y+A E G Y+ K D +S G++ E I
Sbjct: 171 DILKLDSQNLPGSSDNLTSA--IGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 25/204 (12%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V Y +L + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ + +V E M + I + L + ++ ++ GI +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLH 143
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPEVVTRY-YRAPEVI 197
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y D++S G ++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F +G G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E+MP + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D K++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 31/207 (14%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V Y +L + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAIL---FDPRKRGLLCWSKRINIVNGIVKGIL 467
+ + +V E M +++L ++ D + L + ++ GI
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQ--------MLCGIK 140
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART-AGTSF-MMTPYVVTRY-YRAP 194
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITG 554
E + Y D++S G ++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F +G G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E+MP + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D K++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI DF +AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 31/207 (14%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILKL-QHKNLVKLL 416
+G G G V Y +L + +A+K+LS + Q +A+ L+++K+ HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAIL---FDPRKRGLLCWSKRINIVNGIVKGIL 467
+ + +V E M +++L ++ D + L + ++ GI
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQ--------MLCGIK 140
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART-AGTSF-MMTPYVVTRY-YRAP 194
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITG 554
E + Y D++S G ++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 360 NMLGQGGFGPVYKGVLSD-GKEIAVK-----RLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
++G+G F V + + + G++ AVK + +S + E + L+H ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRG--LLCWSKRI--NIVNGIVKGILYL 469
+LL +V+EFM + L F+ KR +S+ + + + I++ + Y
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNP---KISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
H+++ IIHRD+K VLL N K+ FG+A I G G V R VGT +MA
Sbjct: 147 HDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGR-VGTPHFMA 201
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIITG 554
PE Y DV+ GV+L +++G
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 360 NMLGQGGFGPVYKGVLSD-GKEIAVK-----RLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
++G+G F V + + + G++ AVK + +S + E + L+H ++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRG--LLCWSKRI--NIVNGIVKGILYL 469
+LL +V+EFM + L F+ KR +S+ + + + I++ + Y
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNP---KISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
H+++ IIHRD+K VLL N K+ FG+A I G G V R VGT +MA
Sbjct: 149 HDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGR-VGTPHFMA 203
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIITG 554
PE Y DV+ GV+L +++G
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 362 LGQGGFGPVYKGVLSD--------GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLV 413
LGQG F ++KGV + E+ +K L + F ++ KL HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
G C GDE +LV EF+ SLD L + + W ++ + + + +L E++
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLEENT 133
Query: 474 RLRIIHRDLKASNVLLDYDMNPKISDFGMARIF-AGSEGEVNTARIVGTYGYMAPEYAME 532
+IH ++ A N+LL + + K + ++ G V I+ P +E
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 533 GL--YSIKSDVFSFGVLLIEIITG 554
++ +D +SFG L EI +G
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVLSDGK------EIAVKRLSSCSEQGNAEFTNEVLLI 404
V ++F+ +LG+G FG V +L+D K I + + + + E T +
Sbjct: 16 VKLTDFNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRV 72
Query: 405 LKLQHKN-LVKLLGFCVDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
L L K + L C ++L V E++ L ++ ++ G + + I
Sbjct: 73 LALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVGKFKEPQAVFYAAEI 129
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR--IFAGSEGEVNTARIVG 520
G+ +LH+ II+RDLK NV+LD + + KI+DFGM + + G V T G
Sbjct: 130 SIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG----VTTREFCG 182
Query: 521 TYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
T Y+APE Y D +++GVLL E++ G+
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 31/207 (14%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V Y +L + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAIL---FDPRKRGLLCWSKRINIVNGIVKGIL 467
+ + +V E M +++L ++ D + L + ++ GI
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQ--------MLCGIK 140
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAP 194
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITG 554
E + Y D++S G ++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 31/208 (14%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFT-NEVLLILKLQHKNLVKLL 416
+G G G V Y VL + +A+K+LS + Q +A+ E++L+ + HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAIL---FDPRKRGLLCWSKRINIVNGIVKGIL 467
+ + LV E M +++L ++ D + L + ++ GI
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQ--------MLCGIK 140
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
+LH IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y AP
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAP 194
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E + Y D++S G ++ E++ +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 21/231 (9%)
Query: 337 LKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLSSCSEQ-GN 394
LKA+ F + T DV + +G G +G V G+++A+K++ + + N
Sbjct: 42 LKARSFDV---TFDVG-DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN 97
Query: 395 AEFTNEVLLILK-LQHKNLVKL---LGFCVDGDEKLLVYEFMP--NSSLDAILFDPRKRG 448
A+ T L ILK +H N++ + L V E VY + S L I+ +
Sbjct: 98 AKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP-- 155
Query: 449 LLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAG 508
L + +++G+ Y+H ++IHRDLK SN+L++ + KI DFGMAR
Sbjct: 156 -LTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 211
Query: 509 SEGEVN--TARIVGTYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGRR 556
S E V T Y APE + Y+ D++S G + E++ R+
Sbjct: 212 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSE---QGNAEFTNEVL 402
+ L + ++ ++G+G FG V +++ +L S E + ++ F E
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 403 LILKLQHKNLVKLLGFCVDGDEKLL--VYEFMPNSSLDAILFD---PRKRGLLCWSKRIN 457
I+ + V L FC D+K L V E+MP L ++ + P K W+K
Sbjct: 127 DIMAFANSPWVVQL-FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK-----WAKFYT 180
Query: 458 IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTAR 517
+ +L L + +IHRD+K N+LLD + K++DFG + G V+
Sbjct: 181 -----AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDT 234
Query: 518 IVGTYGYMAPEY----AMEGLYSIKSDVFSFGVLLIEIITG 554
VGT Y++PE +G Y + D +S GV L E++ G
Sbjct: 235 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMAR--IFAGSEGEVNTARIV 519
I G+ +L II+RDLK NV+LD + + KI+DFGM + I+ G V T
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFC 182
Query: 520 GTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
GT Y+APE Y D ++FGVLL E++ G+
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFT--NEVLLILKLQHK 410
+ +G+G +G V+K D G+ +A+K+ + + E+ ++ +L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
NLV LL LV+E+ ++ L + D +RG+ + +I ++ + + H
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHEL--DRYQRGVPEHLVK-SITWQTLQAVNFCH 119
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
+ + IHRD+K N+L+ K+ DFG AR+ G + V T Y +PE
Sbjct: 120 KHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELL 174
Query: 531 M-EGLYSIKSDVFSFGVLLIEIITG 554
+ + Y DV++ G + E+++G
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLS-SCSEQGNAEFTNEVLLILK-LQHKNLVKLLGFCV 420
QG Y VL + +A+K+LS Q +A+ L+++K + HKN++ LL
Sbjct: 74 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 421 ------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
+ + LV E M + I + L + ++ ++ GI +LH
Sbjct: 132 PQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSAG- 184
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE +
Sbjct: 185 --IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVILGMG 239
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
Y D++S G ++ E++ +
Sbjct: 240 YKENVDIWSVGCIMGEMVRHK 260
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSS--CSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G F V + V L G E A K +++ S + + + E + L+H N+V+L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRII 478
+ LV++ + L D R + + + I++ +L+ H+ + ++
Sbjct: 72 ISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVV 125
Query: 479 HRDLKASNVLLDYDMNP---KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLY 535
HRDLK N+LL K++DFG+A G + GT GY++PE + Y
Sbjct: 126 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKEAY 183
Query: 536 SIKSDVFSFGVLLIEIITG 554
D+++ GV+L ++ G
Sbjct: 184 GKPVDIWACGVILYILLVG 202
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 25/204 (12%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V Y +L + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ + +V E M + I + L + ++ ++ GI +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLH 143
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVI 197
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y D++S G ++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 25/204 (12%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V Y +L + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ + +V E M + I + L + ++ ++ GI +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLH 143
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVI 197
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y D++S G ++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 359 SNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSC--SEQGNAEFTNEV-LLILKLQHKNLVK 414
S LG+G F V + + S G+E A K L + AE +E+ +L L ++
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L + E +L+ E+ + ++ P ++ + I ++ I++G+ YLH+++
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCL-PELAEMVSENDVIRLIKQILEGVYYLHQNN- 151
Query: 475 LRIIHRDLKASNVLLD--YDM-NPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAM 531
I+H DLK N+LL Y + + KI DFGM+R + I+GT Y+APE
Sbjct: 152 --IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA---CELREIMGTPEYLAPEILN 206
Query: 532 EGLYSIKSDVFSFGVLLIEIIT 553
+ +D+++ G++ ++T
Sbjct: 207 YDPITTATDMWNIGIIAYMLLT 228
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI D G+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 25/204 (12%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V Y +L + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ + +V E M + I + L + ++ ++ GI +LH
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLH 144
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE
Sbjct: 145 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVI 198
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y D++S G ++ E+I G
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI FG+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILK-LQHK 410
+S+F ++LG+G +G V G+ +A+K++ + A T + ILK +H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 411 NLVKLLGF-----CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKG 465
N++ + + +E ++ E M + L ++ +L + ++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI----STQMLSDDHIQYFIYQTLRA 124
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG--------EVNTAR 517
+ LH + +IHRDLK SN+L++ + + K+ DFG+ARI S +
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 518 IVGTYGYMAPEYAM-EGLYSIKSDVFSFGVLLIEIITGR 555
V T Y APE + YS DV+S G +L E+ R
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLLGFCV 420
QG Y VL + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 37 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 421 ------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
+ + LV E M + I + L + ++ ++ GI +LH
Sbjct: 95 PQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSAG- 147
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE +
Sbjct: 148 --IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVILGMG 202
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
Y D++S G ++ E++ +
Sbjct: 203 YKENVDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLLGFCV 420
QG Y VL + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 36 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 421 ------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
+ + LV E M + I + L + ++ ++ GI +LH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE +
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVILGMG 201
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
Y D++S G ++ E++ +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHK 222
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI D G+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFT-NEVLLILKLQHKNLVKLL 416
+G G G V Y VL + +A+K+LS + Q +A+ E++L+ + HKN++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ + LV E M + I + L + ++ ++ GI +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLH 143
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVI 197
Query: 531 MEGLYSIKSDVFSFGVLLIEIITGR 555
+ Y D++S G ++ E++ +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLLGFCV 420
QG Y VL + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 35 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 92
Query: 421 ------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
+ + LV E M + I + L + ++ ++ GI +LH
Sbjct: 93 PQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSAG- 145
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE +
Sbjct: 146 --IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVILGMG 200
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
Y D++S G ++ E++ +
Sbjct: 201 YKENVDIWSVGCIMGEMVRHK 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V Y VL + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ + LV E M + I + L + ++ ++ GI +LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLH 181
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE
Sbjct: 182 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVI 235
Query: 531 MEGLYSIKSDVFSFGVLLIEIITGR 555
+ Y D++S G ++ E++ +
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YLHE II+RDLK NVLLD + + K++D+GM + G T+ GT Y+AP
Sbjct: 136 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 190
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E Y D ++ GVL+ E++ GR
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLLGFCV 420
QG Y VL + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 36 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 421 ------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
+ + LV E M + I + L + ++ ++ GI +LH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE +
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVILGMG 201
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
Y D++S G ++ E++ +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHK 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPAFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E+ P + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+++D K++DFG+A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V Y VL + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ + LV E M + I + L + ++ ++ GI +LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLH 144
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE
Sbjct: 145 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVI 198
Query: 531 MEGLYSIKSDVFSFGVLLIEIITGR 555
+ Y D++S G ++ E++ +
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 35/234 (14%)
Query: 339 AQDFYIDLETLDVATSNFS------DSNMLGQGGFGPV---YKGVLSDGKEIAVKRLSSC 389
A FY +++V S F+ + +G G G V Y VL + +A+K+LS
Sbjct: 1 ANQFY----SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRP 54
Query: 390 SE-QGNAEFTNEVLLILK-LQHKNLVKLLGFCV------DGDEKLLVYEFMPNSSLDAIL 441
+ Q +A+ L+++K + HKN++ LL + + LV E M + I
Sbjct: 55 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 114
Query: 442 FDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFG 501
+ L + ++ ++ GI +LH IIHRDLK SN+++ D KI DFG
Sbjct: 115 ME------LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 165
Query: 502 MARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
+AR AG+ + T +V Y Y APE + Y D++S G ++ E++ +
Sbjct: 166 LART-AGTSF-MMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLLGFCV 420
QG Y VL + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 29 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 421 ------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
+ + LV E M + I + L + ++ ++ GI +LH
Sbjct: 87 PQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSAG- 139
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE +
Sbjct: 140 --IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVILGMG 194
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
Y D++S G ++ E++ +
Sbjct: 195 YKENVDIWSVGCIMGEMVRHK 215
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLLGFCV 420
QG Y VL + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 30 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 421 ------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
+ + LV E M + I + L + ++ ++ GI +LH
Sbjct: 88 PQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSAG- 140
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE +
Sbjct: 141 --IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVILGMG 195
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
Y D++S G ++ E++ +
Sbjct: 196 YKENVDIWSVGCIMGEMVRHK 216
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YLHE II+RDLK NVLLD + + K++D+GM + G T+ GT Y+AP
Sbjct: 121 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 175
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E Y D ++ GVL+ E++ GR
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YLHE II+RDLK NVLLD + + K++D+GM + G T+ GT Y+AP
Sbjct: 125 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 179
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E Y D ++ GVL+ E++ GR
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 21/231 (9%)
Query: 337 LKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLS-DGKEIAVKRLSSCSEQ-GN 394
LKA+ F + T DV + +G G +G V G+++A+K++ + + N
Sbjct: 41 LKARSFDV---TFDVG-DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN 96
Query: 395 AEFTNEVLLILK-LQHKNLVKL---LGFCVDGDEKLLVYEFMP--NSSLDAILFDPRKRG 448
A+ T L ILK +H N++ + L V E VY + S L I+ +
Sbjct: 97 AKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP-- 154
Query: 449 LLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAG 508
L + +++G+ Y+H ++IHRDLK SN+L++ + KI DFGMAR
Sbjct: 155 -LTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210
Query: 509 SEGEVN--TARIVGTYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITGRR 556
S E V T Y APE + Y+ D++S G + E++ R+
Sbjct: 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F +G G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D K++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSE---QGNAEFTNEVL 402
+ L + ++ ++G+G FG V +++ +L S E + ++ F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 403 LILKLQHKNLVKLLGFCVDGDEKL-LVYEFMPNSSLDAIL--FDPRKRGLLCWSKRINIV 459
I+ + V L + D L +V E+MP L ++ +D ++ ++ +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV--- 177
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+L L + IHRD+K N+LLD + K++DFG + EG V V
Sbjct: 178 ------VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAV 230
Query: 520 GTYGYMAPEY----AMEGLYSIKSDVFSFGVLLIEIITG 554
GT Y++PE +G Y + D +S GV L E++ G
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YLHE II+RDLK NVLLD + + K++D+GM + G T+ GT Y+AP
Sbjct: 168 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAP 222
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITGR 555
E Y D ++ GVL+ E++ GR
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILK-LQHK 410
+S+F ++LG+G +G V G+ +A+K++ + A T + ILK +H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 411 NLVKLLGF-----CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKG 465
N++ + + +E ++ E M + L ++ +L + ++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI----STQMLSDDHIQYFIYQTLRA 124
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG--------EVNTAR 517
+ LH + +IHRDLK SN+L++ + + K+ DFG+ARI S +
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 518 IVGTYGYMAPEYAM-EGLYSIKSDVFSFGVLLIEIITGR 555
V T Y APE + YS DV+S G +L E+ R
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRLSSCSEQGNAEFTNEVLLILK-LQHK 410
+S+F ++LG+G +G V G+ +A+K++ + A T + ILK +H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 411 NLVKLLGF-----CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKG 465
N++ + + +E ++ E M + L ++ +L + ++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI----STQMLSDDHIQYFIYQTLRA 124
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG--------EVNTAR 517
+ LH + +IHRDLK SN+L++ + + K+ DFG+ARI S +
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 518 IVGTYGYMAPEYAM-EGLYSIKSDVFSFGVLLIEIITGR 555
V T Y APE + YS DV+S G +L E+ R
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSE---QGNAEFTNEVL 402
+ L + ++ ++G+G FG V +++ +L S E + ++ F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 403 LILKLQHKNLVKLLGFCVDGDEKL-LVYEFMPNSSLDAIL--FDPRKRGLLCWSKRINIV 459
I+ + V L + D L +V E+MP L ++ +D ++ ++ +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV--- 182
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+L L + IHRD+K N+LLD + K++DFG + EG V V
Sbjct: 183 ------VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAV 235
Query: 520 GTYGYMAPEY----AMEGLYSIKSDVFSFGVLLIEIITG 554
GT Y++PE +G Y + D +S GV L E++ G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 346 LETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSE---QGNAEFTNEVL 402
+ L + ++ ++G+G FG V +++ +L S E + ++ F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 403 LILKLQHKNLVKLLGFCVDGDEKL-LVYEFMPNSSLDAIL--FDPRKRGLLCWSKRINIV 459
I+ + V L + D L +V E+MP L ++ +D ++ ++ +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV--- 182
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
+L L + IHRD+K N+LLD + K++DFG + EG V V
Sbjct: 183 ------VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAV 235
Query: 520 GTYGYMAPEY----AMEGLYSIKSDVFSFGVLLIEIITG 554
GT Y++PE +G Y + D +S GV L E++ G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 25/204 (12%)
Query: 362 LGQGGFGPV---YKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLL 416
+G G G V Y +L + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 417 GFCV------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
+ + +V E M + I + L + ++ ++ GI +LH
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLH 145
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
IIHRDLK SN+++ D KI DFG+AR S V T Y APE
Sbjct: 146 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMVPFVVTRYYRAPEVI 199
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y D++S G ++ E+I G
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILK-LQHKNLVKLLGF 418
+G G +G V G +AVK+LS + +A+ T L +LK ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 419 CVDG------DEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
++ LV M + L+ I+ K L ++ I++G+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAME 532
IIHRDLK SN+ ++ D KI D G+AR ++ E+ V T Y APE +
Sbjct: 145 D---IIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTG--YVATRWYRAPEIMLN 196
Query: 533 GL-YSIKSDVFSFGVLLIEIITGR 555
+ Y+ D++S G ++ E++TGR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 87
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 88 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 145 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEII 196
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 197 LSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 28/243 (11%)
Query: 330 VRGRDDDLKAQD---FYIDL------ETLDVATSNFSDS----NMLGQGGFGPVYKGV-L 375
VRG+ D K D FY D+ + ++V + D LG G FG V++ V
Sbjct: 14 VRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEK 73
Query: 376 SDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNS 435
+ G+ K +++ NE+ ++ +L H L+ L D E +L+ EF+
Sbjct: 74 ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG 133
Query: 436 SL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDM- 493
L D I + K + ++ IN + +G+ ++HE S I+H D+K N++ +
Sbjct: 134 ELFDRIAAEDYK---MSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKA 187
Query: 494 -NPKISDFGMARIFAGSE-GEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEI 551
+ KI DFG+A E +V TA T + APE +D+++ GVL +
Sbjct: 188 SSVKIIDFGLATKLNPDEIVKVTTA----TAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 243
Query: 552 ITG 554
++G
Sbjct: 244 LSG 246
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKL--QHKNLVKLLGFC 419
LG+G F K V + ++ S + N T + + LKL H N+VKL
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEAN---TQKEITALKLCEGHPNIVKLHEVF 75
Query: 420 VDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIH 479
D LV E + L + +K+ ++ I+ +V + ++H+ + ++H
Sbjct: 76 HDQLHTFLVMELLNGGELFERI---KKKKHFSETEASYIMRKLVSAVSHMHD---VGVVH 129
Query: 480 RDLKASNVLL---DYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYS 536
RDLK N+L + ++ KI DFG AR+ + T T Y APE + Y
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQNGYD 187
Query: 537 IKSDVFSFGVLLIEIITGR 555
D++S GV+L +++G+
Sbjct: 188 ESCDLWSLGVILYTMLSGQ 206
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E+ P + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+++D K++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEII 211
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLSDG-KEIAVK--------RLSSCSEQGNAEFT-NEVLL 403
N+ +LG+G V + + KE AVK S+ Q E T EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 404 ILKLQ-HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
+ K+ H N+++L LV++ M L L ++ L + I+ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRAL 133
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++ I LH +L I+HRDLK N+LLD DMN K++DFG + E + GT
Sbjct: 134 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTP 187
Query: 523 GYMAPEYAMEGL------YSIKSDVFSFGVLLIEIITG 554
Y+APE + Y + D++S GV++ ++ G
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQG-NAEFTNEVLLILKLQHKNLVKLLG-FC 419
+G+G +G VYK DGK+ L G + E+ L+ +L+H N++ L F
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 420 VDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVK--------GILYLH 470
D K+ L++++ + I F R K + + G+VK GI YLH
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKF---HRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNP-----KISDFGMARIFAGS-EGEVNTARIVGTYGY 524
+ ++HRDLK +N+L+ P KI+D G AR+F + + +V T+ Y
Sbjct: 146 ANW---VLHRDLKPANILV-MGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 525 MAPEYAMEGLYSIKS-DVFSFGVLLIEIIT 553
APE + + K+ D+++ G + E++T
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLSDG-KEIAVK--------RLSSCSEQGNAEFT-NEVLL 403
N+ +LG+G V + + KE AVK S+ Q E T EV +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 404 ILKLQ-HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
+ K+ H N+++L LV++ M L L ++ L + I+ +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRAL 120
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++ I LH +L I+HRDLK N+LLD DMN K++DFG + E + GT
Sbjct: 121 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTP 174
Query: 523 GYMAPEYAMEGL------YSIKSDVFSFGVLLIEIITG 554
Y+APE + Y + D++S GV++ ++ G
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E+ P + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+++D K++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVY---KGVLSD-GKEIAVKRLSSCSEQGNAEFTN----EVL 402
V NF +LG G +G V+ K D GK A+K L + A+ T E
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 403 LILKLQHKNLVKLLGFCVDGDEKL-LVYEFMPNSSLDAILFDPRKRGLLCWSKRINI-VN 460
++ ++ + L + + KL L+ +++ L L R+R + I V
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-SQRER---FTEHEVQIYVG 166
Query: 461 GIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVG 520
IV + +LH +L II+RD+K N+LLD + + ++DFG+++ F E E G
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCG 222
Query: 521 TYGYMAPEYAMEG--LYSIKSDVFSFGVLLIEIITG 554
T YMAP+ G + D +S GVL+ E++TG
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 354 SNFSDSNMLGQGGFGPVYKGVLSDG-KEIAVK--------RLSSCSEQGNAEFT-NEVLL 403
N+ +LG+G V + + KE AVK S+ Q E T EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 404 ILKLQ-HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGI 462
+ K+ H N+++L LV++ M L L ++ L + I+ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRAL 133
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
++ I LH +L I+HRDLK N+LLD DMN K++DFG + E + GT
Sbjct: 134 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLRSVCGTP 187
Query: 523 GYMAPEYAMEGL------YSIKSDVFSFGVLLIEIITG 554
Y+APE + Y + D++S GV++ ++ G
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E+ P + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+++D +++DFG+A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + + L + + I+ G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS-- 131
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 132 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 186
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 32/236 (13%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA-----------EF 397
L S ++ + G +G V GV S+G +A+KR+ + G
Sbjct: 17 LHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRV 76
Query: 398 TNEVLLILKLQHKNLVKLLGFCVDGDE----KL-LVYEFMPNSSLDAILFDPRKRGLLCW 452
E+ L+ H N++ L V +E KL LV E M + L ++ D R ++
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQR---IVIS 132
Query: 453 SKRIN-IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG 511
+ I + I+ G+ LHE ++HRDL N+LL + + I DF +AR
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTA 186
Query: 512 EVNTARIVGTYGYMAPEYAMEGL-YSIKSDVFSFGVLLIEIITG----RRNTGFNQ 562
+ N V Y APE M+ ++ D++S G ++ E+ R +T +NQ
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 152 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 203
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 204 LSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + + L + + I+ G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS-- 131
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 132 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 186
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 32/236 (13%)
Query: 349 LDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA-----------EF 397
L S ++ + G +G V GV S+G +A+KR+ + G
Sbjct: 17 LHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRV 76
Query: 398 TNEVLLILKLQHKNLVKLLGFCVDGDE----KL-LVYEFMPNSSLDAILFDPRKRGLLCW 452
E+ L+ H N++ L V +E KL LV E M + L ++ D R ++
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQR---IVIS 132
Query: 453 SKRIN-IVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEG 511
+ I + I+ G+ LHE ++HRDL N+LL + + I DF +AR
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTA 186
Query: 512 EVNTARIVGTYGYMAPEYAME-GLYSIKSDVFSFGVLLIEIITG----RRNTGFNQ 562
+ N V Y APE M+ ++ D++S G ++ E+ R +T +NQ
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 105/245 (42%), Gaps = 25/245 (10%)
Query: 320 ASKTGLRYQHVRGRDDDLKAQDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLS 376
A+K G + V+ K +DF E+ T++ F LG G FG V +L
Sbjct: 6 AAKKGXEQESVKEFLAKAK-EDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRV---MLV 61
Query: 377 DGKEI----AVKRL--SSCSEQGNAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVY 429
KE A+K L + E T NE ++ + LVKL D +V
Sbjct: 62 KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 430 EFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLL 489
E++P + + L R+ G IV YLH L +I+RDLK N+L+
Sbjct: 122 EYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 490 DYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLI 549
D +++DFG A+ G T + GT Y+APE + Y+ D ++ GVL+
Sbjct: 176 DQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 550 EIITG 554
E+ G
Sbjct: 231 EMAAG 235
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 21/229 (9%)
Query: 336 DLKAQDFYID-LETLDVATSNFSDSNMLGQGGFGPVYKGVLSD------GKEIAVKRLSS 388
DL ++ Y + T T ++ LG+G F V + V K I K+LS+
Sbjct: 12 DLGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA 71
Query: 389 CSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRG 448
Q + E + L+H N+V+L + LV++ + L D R
Sbjct: 72 RDHQ---KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVARE 125
Query: 449 LLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNP---KISDFGMARI 505
+ + ++ I++ + ++H+ I+HRDLK N+LL K++DFG+A
Sbjct: 126 YYSEADASHCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIE 182
Query: 506 FAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
G + GT GY++PE + Y D+++ GV+L ++ G
Sbjct: 183 VQGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 97/268 (36%), Gaps = 72/268 (26%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLS-SCSEQGNAEFTNEVLLILKLQHKN 411
++F +G+GGFG V++ D A+KR+ E + EV + KL+H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 412 LVKLLGFCVDGDEKLLVYE----FMPNSSLDAILFDP----------------------- 444
+V+ ++ + E ++ + S D L P
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 445 ------------------RKRGLLCWSKR------------INIVNGIVKGILYLHEDSR 474
RK L W R ++I I + + +LH
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG- 184
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARI----------VGTYGY 524
++HRDLK SN+ D K+ DFG+ E E VGT Y
Sbjct: 185 --LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLY 242
Query: 525 MAPEYAMEGLYSIKSDVFSFGVLLIEII 552
M+PE YS K D+FS G++L E++
Sbjct: 243 MSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAV-----KRLSSCSEQGNAEFTNEVLLILK 406
T + LG+G F V + V + G+E A K+LS+ Q + E +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---KLEREARICRL 66
Query: 407 LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGI 466
L+H N+V+L + L+++ + L D R + + + I++ +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAV 123
Query: 467 LYLHEDSRLRIIHRDLKASNVLLDYDMNP---KISDFGMARIFAGSEGEVNTA-RIVGTY 522
L+ H+ + ++HR+LK N+LL + K++DFG+A EGE GT
Sbjct: 124 LHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWFGFAGTP 177
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
GY++PE + Y D+++ GV+L ++ G
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 24/225 (10%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSDGKEI----AVKRL--SSCS 390
+DF E+ T++ F LG G FG V +L KE A+K L
Sbjct: 25 EDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVV 81
Query: 391 EQGNAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL 449
+ E T NE ++ + LVKL D +V E++P + + L R+ G
Sbjct: 82 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR 138
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 194
Query: 510 EGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 407 LQ--HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 120
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 121 EAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 173
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 96/225 (42%), Gaps = 24/225 (10%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSDGKEI----AVKRL--SSCS 390
+DF E+ T++ F LG G FG V +L KE A+K L
Sbjct: 25 EDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVV 81
Query: 391 EQGNAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL 449
+ E T NE ++ + LVKL D +V E+ P + + L R+ G
Sbjct: 82 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGR 138
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
IV YLH L +I+RDLK N+++D K++DFG A+ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG- 194
Query: 510 EGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 24/225 (10%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSDGKEI----AVKRL--SSCS 390
+DF E+ T++ F LG G FG V +L KE A+K L
Sbjct: 25 EDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVV 81
Query: 391 EQGNAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL 449
+ E T NE ++ + LVKL D +V E++P + + L R+ G
Sbjct: 82 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR 138
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 194
Query: 510 EGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 195 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 356 FSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILK----LQHK 410
F M GQG FG V G S G +A+K++ + F N L I++ L H
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-----DPRFRNRELQIMQDLAVLHHP 79
Query: 411 NLVKLLGFCVDGDEK-------LLVYEFMPNSSLDAILFDPRKRGLLCWSKRINI-VNGI 462
N+V+L + E+ +V E++P++ L + +R + I + + +
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLL-DYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
++ I LH S + + HRD+K NVL+ + D K+ DFG A+ + SE N A I
Sbjct: 139 IRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP--NVAYICSR 195
Query: 522 YGYMAPEYAM-EGLYSIKSDVFSFGVLLIEIITG 554
Y Y APE Y+ D++S G + E++ G
Sbjct: 196 Y-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++P + + L R+ G IV YLH
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 152 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 203
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 204 LSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 24/225 (10%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSDGKEI----AVKRL--SSCS 390
+DF E+ T++ F LG G FG V +L KE A+K L
Sbjct: 45 EDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVV 101
Query: 391 EQGNAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGL 449
+ E T NE ++ + LVKL D +V E++P + + L R+ G
Sbjct: 102 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR 158
Query: 450 LCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGS 509
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 214
Query: 510 EGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 215 ----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLIL 405
E +V + LG+G +G V K + G+ AVKR+ + N++ +L L
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATV---NSQEQKRLLXDL 83
Query: 406 KLQHKNL-----VKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRI-NIV 459
+ + + V G + + E + ++SLD +G + I
Sbjct: 84 DISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIA 142
Query: 460 NGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIV 519
IVK + +LH S+L +IHRD+K SNVL++ K DFG++ +V
Sbjct: 143 VSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLV---DDVAKDIDA 197
Query: 520 GTYGYMAPEYAMEGL----YSIKSDVFSFGVLLIEIITGR 555
G Y APE L YS+KSD++S G+ IE+ R
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILR 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E+ P + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+++D +++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 139
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 140 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 192
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
IV + YLH S +++RDLK N++LD D + KI+DFG+ + G + GT
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 312
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 140
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 141 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 193
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 139
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 140 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 192
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
IV + YLH S +++RDLK N++LD D + KI+DFG+ + G + GT
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 315
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
L KL D +V E+ P + + L R+ G IV YLH
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+++D K++DFG A+ G T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 140
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 141 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 193
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 362 LGQGGFGPVYK------GVLSDGKEIAVKRLSSCSEQG--NAEFTNEVLLILKLQHKNLV 413
LG G F V K G+ K I KR + S +G + EV ++ ++QH N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 414 KLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDS 473
L + + +L+ E + L L + + L + + I+ G+ YLH
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS-- 132
Query: 474 RLRIIHRDLKASNV-LLDYDM-NP--KISDFGMA-RIFAGSEGEVNTARIVGTYGYMAPE 528
L+I H DLK N+ LLD ++ P KI DFG+A +I G+E + I GT ++APE
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPE 187
Query: 529 YAMEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
IV + YLH S +++RDLK N++LD D + KI+DFG+ + G + GT
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 174
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
IV + YLH S +++RDLK N++LD D + KI+DFG+ + G + GT
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 172
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 140
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 141 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 193
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
IV + YLH S +++RDLK N++LD D + KI+DFG+ + G + GT
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 173
Query: 522 YGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
L KL D +V E+ P + + L R+ G IV YLH
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+++D K++DFG A+ G T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 153
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 154 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 206
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 152
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 153 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 205
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 153
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 154 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 206
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 152
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 153 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 205
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 152
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 153 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 205
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 152
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 153 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 205
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 153
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 154 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 206
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 153
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 154 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 206
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 103/245 (42%), Gaps = 25/245 (10%)
Query: 320 ASKTGLRYQHVRGRDDDLKAQDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLS 376
A+K G + V+ K +DF E+ T++ F LG G FG V +L
Sbjct: 6 AAKKGXEQESVKEFLAKAK-EDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRV---MLV 61
Query: 377 DGKEI----AVKRL--SSCSEQGNAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVY 429
KE A+K L + E T NE + + LVKL D +V
Sbjct: 62 KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVL 121
Query: 430 EFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLL 489
E+ P + + L R+ G IV YLH L +I+RDLK N+L+
Sbjct: 122 EYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 490 DYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLI 549
D K++DFG A+ G T + GT Y+APE + Y+ D ++ GVL+
Sbjct: 176 DQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 550 EIITG 554
E+ G
Sbjct: 231 EMAAG 235
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 407 LQ--HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 120
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 121 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 173
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 167
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 168 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 220
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 159
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 160 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 212
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 124
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 125 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 177
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 407 LQ--HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 123
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + V T GT
Sbjct: 124 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD-FDGTR 176
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 407 LQ--HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 120
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 121 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 173
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
L KL D +V E+ P + + L R+ G IV YLH
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+++D K++DFG A+ G T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 125
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 126 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 178
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 167
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 168 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 220
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 125
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 126 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 178
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 125
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 126 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 178
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLLGFCV 420
QG Y +L + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 30 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 87
Query: 421 ------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
+ + +V E M + I + L + ++ ++ GI +LH
Sbjct: 88 PQKSLEEFQDVYIVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSAG- 140
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE +
Sbjct: 141 --IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVILGMG 195
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
Y D++S G ++ E++ +
Sbjct: 196 YKENVDLWSVGCIMGEMVCHK 216
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 172
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 173 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 225
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLLGFCV 420
QG Y +L + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 41 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 98
Query: 421 ------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
+ + +V E M + I + L + ++ ++ GI +LH
Sbjct: 99 PQKSLEEFQDVYIVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSAG- 151
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IIHRDLK SN+++ D KI DFG+AR AG+ + T +V Y Y APE +
Sbjct: 152 --IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSF-MMTPYVVTRY-YRAPEVILGMG 206
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
Y D++S G ++ E++ +
Sbjct: 207 YKENVDLWSVGCIMGEMVCHK 227
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 125/314 (39%), Gaps = 52/314 (16%)
Query: 340 QDFYIDLETLDVATSNFSDSNMLGQGGFGPV--YKGVLSDGKEIAVKRLSSCSEQGNAEF 397
++ Y + + ++ LG+GGF V +G L DG A+KR+ +Q E
Sbjct: 15 ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEA 73
Query: 398 TNEVLLILKLQHKNLVKLLGFCVD----GDEKLLVYEFMPNSSLDAILFDPRKRG-LLCW 452
E + H N+++L+ +C+ E L+ F +L + + +G L
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFG-MARIFAGSEG 511
+ + ++ GI +G+ +H HRDLK +N+LL + P + D G M + EG
Sbjct: 134 DQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190
Query: 512 EVNTARIVG------TYGYMAPEYAMEGLYSIKS--------DVFSFGVLLIEIITGRRN 557
+ T Y APE L+S++S DV+S G +L ++ G
Sbjct: 191 SRQALTLQDWAAQRCTISYRAPE-----LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
Query: 558 TGFNQSRGATA----------PNLLAYAWHLWNEGNALDLIDPLLTDTCSPDEFLRYIHI 607
+G + P ++ LW N++ +DP + HI
Sbjct: 246 YDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDP-----------HQRPHI 294
Query: 608 GLLCVQEDAFDRPT 621
LL Q +A P
Sbjct: 295 PLLLSQLEALQPPA 308
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 362 LGQGGFGPVYK-GVLSDGKEIAVK----RLSSCSEQG--NAEFTNEVLLILKLQHKNLVK 414
LG G F V K S G E A K R S S +G E EV ++ ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L + + +L+ E + L L ++ L + + + I+ G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK-- 134
Query: 475 LRIIHRDLKASNV-LLDYDM---NPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
+I H DLK N+ LLD ++ + K+ DFG+A E V I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIV 190
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSG 214
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 407 LQ--HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E P D LFD +RG L + ++
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVL 147
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 148 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 200
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 22/201 (10%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLLGFCV 420
QG Y +L + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 421 ------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
+ + +V E M + I + L + ++ ++ GI +LH
Sbjct: 94 PQKSLEEFQDVYIVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IIHRDLK SN+++ D KI DFG+AR AG+ + V T Y APE +
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMEPE--VVTRYYRAPEVILGMG 201
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
Y D++S G ++ E++ +
Sbjct: 202 YKENVDIWSVGCIMGEMVCHK 222
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 336 DLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA 395
DL ++ Y +++ V +S +G GG V++ VL++ K+I + + E N
Sbjct: 12 DLGTENLY--FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQ 68
Query: 396 ---EFTNEVLLILKLQHKN--LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLL 450
+ NE+ + KLQ + +++L + + +Y M ++D + +K+ +
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSID 125
Query: 451 CWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE 510
W ++ + +++ + +H+ I+H DLK +N L+ D K+ DFG+A
Sbjct: 126 PWERK-SYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT 180
Query: 511 GEVNTARIVGTYGYMAPEYAMEGLYSIKS------------DVFSFGVLLIEIITGRRNT 558
V VGT YM PE A++ + S + DV+S G +L + G+ T
Sbjct: 181 TSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--T 237
Query: 559 GFNQ 562
F Q
Sbjct: 238 PFQQ 241
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 140
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 141 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 194 -RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 19/242 (7%)
Query: 320 ASKTGLRYQHVRGRDDDLKAQDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLS 376
A+K G + V+ K +DF ET T+ F LG G FG V
Sbjct: 5 AAKKGXEQESVKEFLAKAK-EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 377 D-GKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFM 432
+ G A+K L + E T NE ++ + LVKL D +V E++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 433 PNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYD 492
+ + L R+ G IV YLH L +I+RDLK N+L+D
Sbjct: 124 AGGEMFSHL---RRIGRFAEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 493 MNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEII 552
+++DFG A+ G T + GT Y+APE + Y+ D ++ GVL+ E+
Sbjct: 178 GYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 553 TG 554
G
Sbjct: 233 AG 234
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 336 DLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA 395
DL ++ Y +++ V +S +G GG V++ VL++ K+I + + E N
Sbjct: 12 DLGTENLY--FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQ 68
Query: 396 ---EFTNEVLLILKLQHKN--LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLL 450
+ NE+ + KLQ + +++L + + +Y M ++D + +K+ +
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSID 125
Query: 451 CWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSE 510
W ++ + +++ + +H+ I+H DLK +N L+ D K+ DFG+A
Sbjct: 126 PWERK-SYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDX 180
Query: 511 GEVNTARIVGTYGYMAPEYAMEGLYSIKS------------DVFSFGVLLIEIITGRRNT 558
V VGT YM PE A++ + S + DV+S G +L + G+ T
Sbjct: 181 XXVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--T 237
Query: 559 GFNQ 562
F Q
Sbjct: 238 PFQQ 241
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 31/248 (12%)
Query: 332 GRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVK--RLSS 388
G DDD KA E + V +S +G GG V++ VL++ K+I A+K L
Sbjct: 36 GTDDDDKASSSA--NECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEE 92
Query: 389 CSEQGNAEFTNEVLLILKLQHKN--LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK 446
Q + NE+ + KLQ + +++L + + +Y M ++D + +K
Sbjct: 93 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKK 149
Query: 447 RGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIF 506
+ + W ++ N +++ + +H+ I+H DLK +N L+ D K+ DFG+A
Sbjct: 150 KSIDPWERKSYWKN-MLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQM 204
Query: 507 AGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKS------------DVFSFGVLLIEIITG 554
V VGT YM PE A++ + S + DV+S G +L + G
Sbjct: 205 QPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
Query: 555 RRNTGFNQ 562
+ T F Q
Sbjct: 264 K--TPFQQ 269
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 354 SNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVK-----RLSSCSEQGNA-EFTNEVLLILK 406
S + +LG GGFG VY G+ +SD +A+K R+S E N EV+L+ K
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 407 LQH--KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNGIV 463
+ +++LL + D +L+ E M LFD +RG L + ++
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQ---DLFDFITERGALQEELARSFFWQVL 124
Query: 464 KGILYLHEDSRLRIIHRDLKASNVLLDYDMNP-KISDFGMARIFAGSEGEVNTARIVGTY 522
+ + + H ++HRD+K N+L+D + K+ DFG + + GT
Sbjct: 125 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTR 177
Query: 523 GYMAPEYAMEGLYSIKS-DVFSFGVLLIEIITG 554
Y PE+ Y +S V+S G+LL +++ G
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 94/222 (42%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 45 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 104
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 105 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 161
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G+
Sbjct: 162 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA--- 215
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 216 --TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 140
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 141 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 19/242 (7%)
Query: 320 ASKTGLRYQHVRGRDDDLKAQDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLS 376
A+K G + V+ K +DF ET T+ F LG G FG V
Sbjct: 5 AAKKGXEQESVKEFLAKAK-EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 377 D-GKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFM 432
+ G A+K L + E T NE ++ + LVKL D +V E++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 433 PNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYD 492
+ + L R+ G IV YLH L +I+RDLK N+L+D
Sbjct: 124 AGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 493 MNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEII 552
+++DFG A+ G T + GT Y+APE + Y+ D ++ GVL+ E+
Sbjct: 178 GYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 553 TG 554
G
Sbjct: 233 AG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 140
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 141 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 194 -RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 31/248 (12%)
Query: 332 GRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVK--RLSS 388
G DDD KA E + V +S +G GG V++ VL++ K+I A+K L
Sbjct: 36 GTDDDDKASSSA--NECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEE 92
Query: 389 CSEQGNAEFTNEVLLILKLQHKN--LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK 446
Q + NE+ + KLQ + +++L + + +Y M ++D + +K
Sbjct: 93 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKK 149
Query: 447 RGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIF 506
+ + W ++ N +++ + +H+ I+H DLK +N L+ D K+ DFG+A
Sbjct: 150 KSIDPWERKSYWKN-MLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQM 204
Query: 507 AGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKS------------DVFSFGVLLIEIITG 554
V VGT YM PE A++ + S + DV+S G +L + G
Sbjct: 205 QPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
Query: 555 RRNTGFNQ 562
+ T F Q
Sbjct: 264 K--TPFQQ 269
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 19/242 (7%)
Query: 320 ASKTGLRYQHVRGRDDDLKAQDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLS 376
A+K G + V+ K +DF ET T+ F LG G FG V
Sbjct: 5 AAKKGXEQESVKEFLAKAK-EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 377 D-GKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFM 432
+ G A+K L + E T NE ++ + LVKL D +V E++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 433 PNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYD 492
+ + L R+ G IV YLH L +I+RDLK N+L+D
Sbjct: 124 AGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 493 MNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEII 552
+++DFG A+ G T + GT Y+APE + Y+ D ++ GVL+ E+
Sbjct: 178 GYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 553 TG 554
G
Sbjct: 233 AG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 140
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 141 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 140
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 141 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXE 140
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 141 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 22/201 (10%)
Query: 363 GQGGFGPVYKGVLSDGKEIAVKRLSSCSE-QGNAEFTNEVLLILK-LQHKNLVKLLGFCV 420
QG Y +L + +A+K+LS + Q +A+ L+++K + HKN++ LL
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 421 ------DGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
+ + +V E M + I + L + ++ ++ GI +LH
Sbjct: 94 PQKSLEEFQDVYIVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 475 LRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGL 534
IIHRDLK SN+++ D KI DFG+AR AG+ + V T Y APE +
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMEPE--VVTRYYRAPEVILGMG 201
Query: 535 YSIKSDVFSFGVLLIEIITGR 555
Y D++S G ++ E++ +
Sbjct: 202 YKENVDLWSVGCIMGEMVCHK 222
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 25 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 84
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 141
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 142 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 194
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 195 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 15/204 (7%)
Query: 355 NFSDSNMLGQGGFGPVY-KGVLSDGKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHK 410
F LG G FG V + G A+K L + E T NE ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 411 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLH 470
LVKL D +V E++ + + L R+ G IV YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 471 EDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+ Y+ D ++ GVL+ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 362 LGQGGFGPVYK-GVLSDGKEIAVK----RLSSCSEQG--NAEFTNEVLLILKLQHKNLVK 414
LG G F V K S G E A K R S S +G E EV ++ ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L + + +L+ E + L L ++ L + + + I+ G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK-- 134
Query: 475 LRIIHRDLKASNV-LLDYDM---NPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
+I H DLK N+ LLD ++ + K+ DFG+A E V I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIV 190
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 362 LGQGGFGPVYK-GVLSDGKEIAVK----RLSSCSEQG--NAEFTNEVLLILKLQHKNLVK 414
LG G F V K S G E A K R S S +G E EV ++ ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L + + +L+ E + L L ++ L + + + I+ G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK-- 134
Query: 475 LRIIHRDLKASNV-LLDYDM---NPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
+I H DLK N+ LLD ++ + K+ DFG+A E V I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIV 190
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSG 214
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 19/242 (7%)
Query: 320 ASKTGLRYQHVRGRDDDLKAQDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLS 376
A+K G + V+ K +DF ET T+ F LG G FG V
Sbjct: 5 AAKKGXEQESVKEFLAKAK-EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 377 D-GKEIAVKRL--SSCSEQGNAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFM 432
+ G A+K L + E T NE ++ + LVKL D +V E++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 433 PNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYD 492
+ + L R+ G IV YLH L +I+RDLK N+L+D
Sbjct: 124 AGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 493 MNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEII 552
+++DFG A+ G T + GT Y+APE + Y+ D ++ GVL+ E+
Sbjct: 178 GYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 553 TG 554
G
Sbjct: 233 AG 234
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 362 LGQGGFGPVYK-GVLSDGKEIAVK----RLSSCSEQG--NAEFTNEVLLILKLQHKNLVK 414
LG G F V K S G E A K R S S +G E EV ++ ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L + + +L+ E + L L ++ L + + + I+ G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK-- 134
Query: 475 LRIIHRDLKASNV-LLDYDM---NPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
+I H DLK N+ LLD ++ + K+ DFG+A E V I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIV 190
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 11 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 70
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 71 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 127
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 128 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG---- 180
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 181 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 362 LGQGGFGPVYK-GVLSDGKEIAVK----RLSSCSEQG--NAEFTNEVLLILKLQHKNLVK 414
LG G F V K S G E A K R S S +G E EV ++ ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L + + +L+ E + L L ++ L + + + I+ G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK-- 134
Query: 475 LRIIHRDLKASNV-LLDYDM---NPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
+I H DLK N+ LLD ++ + K+ DFG+A E V I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIV 190
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 15/226 (6%)
Query: 339 AQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVKRLSSCSEQGNAE- 396
A+ F ++ + + +F ++G+G FG V L + ++ A+K L+ AE
Sbjct: 59 AKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET 118
Query: 397 --FTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSK 454
F E +++ K + L D + LV ++ L +L R L
Sbjct: 119 ACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMA 177
Query: 455 RINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN 514
R + ++ I +H+ L +HRD+K N+L+D + + +++DFG + +G V
Sbjct: 178 RFYLAEMVI-AIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSC-LKLMEDGTVQ 232
Query: 515 TARIVGTYGYMAPE--YAME---GLYSIKSDVFSFGVLLIEIITGR 555
++ VGT Y++PE AME G Y + D +S GV + E++ G
Sbjct: 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXE 140
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 141 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGN-AEFTNEVLLILKLQHKNLVKLLGFC 419
+G GGF V + G+ +A+K + + + E+ + L+H+++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 420 VDGDEKLLVYEFMPNSSL-DAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRII 478
++ +V E+ P L D I+ R L + + IV + Y+H
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDR----LSEEETRVVFRQIVSAVAYVHSQG---YA 130
Query: 479 HRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLY-SI 537
HRDLK N+L D K+ DFG+ G++ + + G+ Y APE Y
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-DYHLQTCCGSLAYAAPELIQGKSYLGS 189
Query: 538 KSDVFSFGVLLIEIITG 554
++DV+S G+LL ++ G
Sbjct: 190 EADVWSMGILLYVLMCG 206
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 19 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 78
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 79 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXE 135
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 136 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 188
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 189 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 24/202 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
+G G FG E+ + E+ + E++ L+H N+V+ +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN------IVNGIVKGILYLHEDSRL 475
+V E+ L F+ +C + R + ++ G+ Y H +
Sbjct: 87 PTHLAIVMEYASGGEL----FE-----RICNAGRFSEDEARFFFQQLISGVSYAHA---M 134
Query: 476 RIIHRDLKASNVLLDYDMNP--KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG 533
++ HRDLK N LLD P KI+DFG ++ S VGT Y+APE ++
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAPEVLLKK 191
Query: 534 LYSIK-SDVFSFGVLLIEIITG 554
Y K +DV+S GV L ++ G
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVG 213
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 45 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 104
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 105 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXE 161
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 162 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 214
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 215 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 20/200 (10%)
Query: 362 LGQGGFGPVYKGVLSD---GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
LG+G FG V++ + D G + AVK++ E AE E++ L +V L G
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVRL--EVFRAE---ELMACAGLTSPRIVPLYGA 134
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRII 478
+G + E + SL ++ +++G L + + + ++G+ YLH SR RI+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLV---KEQGCLPEDRALYYLGQALEGLEYLH--SR-RIL 188
Query: 479 HRDLKASNVLLDYD-MNPKISDFGMARIFA--GSEGEVNTAR-IVGTYGYMAPEYAMEGL 534
H D+KA NVLL D + + DFG A G ++ T I GT +MAPE +
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 535 YSIKSDVFSFGVLLIEIITG 554
K DV+S +++ ++ G
Sbjct: 249 CDAKVDVWSSCCMMLHMLNG 268
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 359 SNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ-HKNLVKLL 416
++LG+G V + L +E AVK + + EV ++ + Q H+N+++L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
F + D LV+E M S IL KR + +V + + +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHFNELEASVVVQDVASALDFLHNKG--- 131
Query: 477 IIHRDLKASNVLLDY--DMNP-KISDFGMAR--IFAGSEGEVNTARIV---GTYGYMAPE 528
I HRDLK N+L ++ ++P KI DFG+ G ++T ++ G+ YMAPE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 529 ----YAMEG-LYSIKSDVFSFGVLLIEIITG 554
++ E +Y + D++S GV+L +++G
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 362 LGQGGFGPVYKGVLSD---GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
LG+G FG V++ + D G + AVK++ E AE E++ L +V L G
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRL--EVFRAE---ELMACAGLTSPRIVPLYGA 153
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRII 478
+G + E + SL ++ +++G L + + + ++G+ YLH SR RI+
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLV---KEQGCLPEDRALYYLGQALEGLEYLH--SR-RIL 207
Query: 479 HRDLKASNVLLDYD-MNPKISDFGMARIFAG---SEGEVNTARIVGTYGYMAPEYAMEGL 534
H D+KA NVLL D + + DFG A + + I GT +MAPE +
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 535 YSIKSDVFSFGVLLIEIITG 554
K DV+S +++ ++ G
Sbjct: 268 CDAKVDVWSSCCMMLHMLNG 287
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 362 LGQGGFGPVYK-GVLSDGKEIAVK----RLSSCSEQG--NAEFTNEVLLILKLQHKNLVK 414
LG G F V K S G E A K R S S +G E EV ++ ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 415 LLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSR 474
L + + +L+ E + L L ++ L + + + I+ G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK-- 134
Query: 475 LRIIHRDLKASNV-LLDYDM---NPKISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYA 530
+I H DLK N+ LLD ++ + K+ DFG+A E V I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIV 190
Query: 531 MEGLYSIKSDVFSFGVLLIEIITG 554
+++D++S GV+ +++G
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVL----SDGKEIAVKRLSS---CSEQGNAEFTNEVLL 403
V ++F +LG+G FG V +L + G+ A+K L ++ A E +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 404 ILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG-I 462
+ +H L L D V E+ L F R + +R I
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEI 114
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
V + YLH +++RD+K N++LD D + KI+DFG+ + G GT
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTP 169
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 354 SNFSDSNMLGQGGFGPVYKG-VLSDGKEIAVKRLSSCSEQGNAEFTN------EVLLILK 406
+ + +LG+GGFG V+ G L+D ++A+K + G + ++ EV L+ K
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 407 LQ----HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFD-PRKRGLLCWSKRINIVNG 461
+ H +++LL + + +LV E P + D LFD ++G L
Sbjct: 91 VGAGGGHPGVIRLLDWFETQEGFMLVLE-RPLPAQD--LFDYITEKGPLGEGPSRCFFGQ 147
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMN-PKISDFGMARIFAGSEGEVNTARIVG 520
+V I + H ++HRD+K N+L+D K+ DFG + + G
Sbjct: 148 VVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLH----DEPYTDFDG 200
Query: 521 TYGYMAPEYAMEGLY-SIKSDVFSFGVLLIEIITG 554
T Y PE+ Y ++ + V+S G+LL +++ G
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVL----SDGKEIAVKRLSS---CSEQGNAEFTNEVLL 403
V ++F +LG+G FG V +L + G+ A+K L ++ A E +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 404 ILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG-I 462
+ +H L L D V E+ L F R + +R I
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEI 114
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
V + YLH +++RD+K N++LD D + KI+DFG+ + G GT
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTP 169
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVL----SDGKEIAVKRLSS---CSEQGNAEFTNEVLL 403
V ++F +LG+G FG V +L + G+ A+K L ++ A E +
Sbjct: 5 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 404 ILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG-I 462
+ +H L L D V E+ L F R + +R I
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEI 117
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
V + YLH +++RD+K N++LD D + KI+DFG+ + G GT
Sbjct: 118 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTP 172
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
+G G FG E+ + E+ A E++ L+H N+V+ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN------IVNGIVKGILYLHEDSRL 475
+V E+ L F+ +C + R + ++ G+ Y H +
Sbjct: 87 PTHLAIVMEYASGGEL----FE-----RICNAGRFSEDEARFFFQQLISGVSYCHA---M 134
Query: 476 RIIHRDLKASNVLLDYDMNP--KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG 533
++ HRDLK N LLD P KI DFG ++ S VGT Y+APE ++
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 534 LYSIK-SDVFSFGVLLIEIITG 554
Y K +DV+S GV L ++ G
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVG 213
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVL----SDGKEIAVKRLSS---CSEQGNAEFTNEVLL 403
V ++F +LG+G FG V +L + G+ A+K L ++ A E +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 404 ILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG-I 462
+ +H L L D V E+ L F R + +R I
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEI 114
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
V + YLH +++RD+K N++LD D + KI+DFG+ + G GT
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTP 169
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVL----SDGKEIAVKRLSS---CSEQGNAEFTNEVLL 403
V ++F +LG+G FG V +L + G+ A+K L ++ A E +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 404 ILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG-I 462
+ +H L L D V E+ L F R + +R I
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEI 114
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
V + YLH +++RD+K N++LD D + KI+DFG+ + G GT
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTP 169
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVL----SDGKEIAVKRLSS---CSEQGNAEFTNEVLL 403
V ++F +LG+G FG V +L + G+ A+K L ++ A E +
Sbjct: 7 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 63
Query: 404 ILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG-I 462
+ +H L L D V E+ L F R + +R I
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEI 119
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
V + YLH +++RD+K N++LD D + KI+DFG+ + G GT
Sbjct: 120 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTP 174
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 140
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 141 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ ++ G
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 351 VATSNFSDSNMLGQGGFGPVYKGVL----SDGKEIAVKRLSS---CSEQGNAEFTNEVLL 403
V ++F +LG+G FG V +L + G+ A+K L ++ A E +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 404 ILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG-I 462
+ +H L L D V E+ L F R + +R I
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEI 114
Query: 463 VKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTY 522
V + YLH +++RD+K N++LD D + KI+DFG+ + G GT
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTP 169
Query: 523 GYMAPEYAMEGLYSIKSDVFSFGVLLIEIITGR 555
Y+APE + Y D + GV++ E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 140
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+++D +++DFG A+ G
Sbjct: 141 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG---- 193
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+APE + Y+ D ++ GVL+ E+ G
Sbjct: 194 -RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYM 525
+L + +L +HRD+K NVLLD + + +++DFG + +G V ++ VGT Y+
Sbjct: 201 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGTPDYI 259
Query: 526 APEY--AME---GLYSIKSDVFSFGVLLIEIITGR 555
+PE AME G Y + D +S GV + E++ G
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 466 ILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYM 525
+L + +L +HRD+K NVLLD + + +++DFG + +G V ++ VGT Y+
Sbjct: 185 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGTPDYI 243
Query: 526 APEY--AME---GLYSIKSDVFSFGVLLIEIITGR 555
+PE AME G Y + D +S GV + E++ G
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 353 TSNFSDSNMLGQGGFGPVYKGV-LSDGKEIAVKRLSS--CSEQGNAEFTNEVLLILKLQH 409
T + LG+G F V + + + G+E A K +++ S + + + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 410 KNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYL 469
N+V+L + LV++ + L D R + + + I++ + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 470 HEDSRLRIIHRDLKASNVLLDYDMNP---KISDFGMARIFAGSEGEVNTARIVGTYGYMA 526
H + I+HRDLK N+LL K++DFG+A G + GT GY++
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 527 PEYAMEGLYSIKSDVFSFGVLLIEIITG 554
PE + Y D+++ GV+L ++ G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 362 LGQGGFGPVYKGV-LSDGKEIAVKRLSS--CSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
LG+G F V + + + G+E A K +++ S + + + E + L+H N+V+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRII 478
+ LV++ + L D R + + + I++ + + H + I+
Sbjct: 72 ISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHCHLNG---IV 125
Query: 479 HRDLKASNVLLDYDMNP---KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLY 535
HRDLK N+LL K++DFG+A G + GT GY++PE + Y
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKDPY 183
Query: 536 SIKSDVFSFGVLLIEIITG 554
D+++ GV+L ++ G
Sbjct: 184 GKPVDMWACGVILYILLVG 202
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 31/248 (12%)
Query: 332 GRDDDLKAQDFYIDLETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEI-AVK--RLSS 388
G DDD KA E + V +S +G GG V++ VL++ K+I A+K L
Sbjct: 36 GTDDDDKASSSA--NECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEE 92
Query: 389 CSEQGNAEFTNEVLLILKLQHKN--LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRK 446
Q + NE+ + KLQ + +++L + + +Y M ++D + +K
Sbjct: 93 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKK 149
Query: 447 RGLLCWSKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIF 506
+ + W ++ N +++ + +H+ I+H DLK +N L+ D K+ DFG+A
Sbjct: 150 KSIDPWERKSYWKN-MLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQM 204
Query: 507 AGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKS------------DVFSFGVLLIEIITG 554
V VG YM PE A++ + S + DV+S G +L + G
Sbjct: 205 QPDTTSVVKDSQVGAVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
Query: 555 RRNTGFNQ 562
+ T F Q
Sbjct: 264 K--TPFQQ 269
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA---EFTNEVLL 403
E + V +S +G GG V++ VL++ K+I + + E N + NE+
Sbjct: 2 ECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 60
Query: 404 ILKLQHKN--LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
+ KLQ + +++L + + +Y M ++D + +K+ + W ++ N
Sbjct: 61 LNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKN- 116
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
+++ + +H+ I+H DLK +N L+ D K+ DFG+A V VGT
Sbjct: 117 MLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGT 172
Query: 522 YGYMAPEYAMEGLYSIKS------------DVFSFGVLLIEIITGRRNTGFNQ 562
YM PE A++ + S + DV+S G +L + G+ T F Q
Sbjct: 173 VNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQ 222
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 362 LGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 421
+G G FG E+ + E+ + E++ L+H N+V+ +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 422 GDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRIN------IVNGIVKGILYLHEDSRL 475
+V E+ L F+ +C + R + ++ G+ Y H +
Sbjct: 86 PTHLAIVMEYASGGEL----FE-----RICNAGRFSEDEARFFFQQLISGVSYCHA---M 133
Query: 476 RIIHRDLKASNVLLDYDMNP--KISDFGMARIFAGSEGEVNTARIVGTYGYMAPEYAMEG 533
++ HRDLK N LLD P KI DFG ++ S VGT Y+APE ++
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKK 190
Query: 534 LYSIK-SDVFSFGVLLIEIITG 554
Y K +DV+S GV L ++ G
Sbjct: 191 EYDGKVADVWSCGVTLYVMLVG 212
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA---EFTNEVLL 403
E + V +S +G GG V++ VL++ K+I + + E N + NE+
Sbjct: 5 ECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 63
Query: 404 ILKLQHKN--LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
+ KLQ + +++L + + +Y M ++D + +K+ + W ++ +
Sbjct: 64 LNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKN 119
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
+++ + +H+ I+H DLK +N L+ D K+ DFG+A V VGT
Sbjct: 120 MLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGT 175
Query: 522 YGYMAPEYAMEGLYSIKS------------DVFSFGVLLIEIITGRRNTGFNQ 562
YM PE A++ + S + DV+S G +L + G+ T F Q
Sbjct: 176 VNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQ 225
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 347 ETLDVATSNFSDSNMLGQGGFGPVYKGVLSDGKEIAVKRLSSCSEQGNA---EFTNEVLL 403
E + V +S +G GG V++ VL++ K+I + + E N + NE+
Sbjct: 1 ECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 59
Query: 404 ILKLQHKN--LVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNG 461
+ KLQ + +++L + + +Y M ++D + +K+ + W ++ +
Sbjct: 60 LNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKN 115
Query: 462 IVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGT 521
+++ + +H+ I+H DLK +N L+ D K+ DFG+A V VGT
Sbjct: 116 MLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGT 171
Query: 522 YGYMAPEYAMEGLYSIKS------------DVFSFGVLLIEIITGRRNTGFNQ 562
YM PE A++ + S + DV+S G +L + G+ T F Q
Sbjct: 172 VNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQ 221
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 360 NMLGQGGFGPVYKGVLS-DGKEIAVKRLSSCSEQ--GNAEFTNEVLLILKLQHKNLVKLL 416
+++G G +G V + + + +A+K++ E E+ ++ +L H ++VK+L
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 417 GFCVDGD----EKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHED 472
+ D ++L V + +S + P L ++ ++ G+ Y+H
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADSDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA 175
Query: 473 SRLRIIHRDLKASNVLLDYDMNPKISDFGMARI------------FAGSEGEVN------ 514
I+HRDLK +N L++ D + K+ DFG+AR + E ++N
Sbjct: 176 G---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 515 --------TARIVGTYGYMAPEYA-MEGLYSIKSDVFSFGVLLIEIITG-RRNTGFNQSR 564
T +V T Y APE ++ Y+ DV+S G + E++ + N ++ R
Sbjct: 233 TKNLKRQLTGHVV-TRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADR 291
Query: 565 GATAP 569
G P
Sbjct: 292 GPLFP 296
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 20/217 (9%)
Query: 354 SNFSDSNMLGQGGFGPVY------KGVLSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKL 407
S+F ++G+G FG V + V K + K + E+ + VLL +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK-NV 96
Query: 408 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+H LV L D+ V +++ L L R+R L R I +
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYAAE-IASALG 153
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVNTARIVGTYGYMAP 527
YLH L I++RDLK N+LLD + ++DFG+ + E T+ GT Y+AP
Sbjct: 154 YLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAP 208
Query: 528 EYAMEGLYSIKSDVFSFGVLLIEIITG-----RRNTG 559
E + Y D + G +L E++ G RNT
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA 245
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 92/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 140
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 141 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT Y+AP + Y+ D ++ GVL+ E+ G
Sbjct: 194 -RTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 362 LGQGGFGPVYKGVLSD---GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
LG+G FG V++ + D G + AVK++ E++ L +V L G
Sbjct: 80 LGRGSFGEVHR--MKDKQTGFQCAVKKVRL-----EVFRVEELVACAGLSSPRIVPLYGA 132
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRII 478
+G + E + SL ++ ++ G L + + + ++G+ YLH RI+
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR---RIL 186
Query: 479 HRDLKASNVLLDYDMN-PKISDFGMARIFAG---SEGEVNTARIVGTYGYMAPEYAMEGL 534
H D+KA NVLL D + + DFG A + + I GT +MAPE M
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 535 YSIKSDVFSFGVLLIEIITG 554
K D++S +++ ++ G
Sbjct: 247 CDAKVDIWSSCCMMLHMLNG 266
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 359 SNMLGQGGFGPVYKGV-LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKLQ-HKNLVKLL 416
++LG+G V + L +E AVK + + EV ++ + Q H+N+++L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 417 GFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLR 476
F + D LV+E M S IL KR + +V + + +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHFNELEASVVVQDVASALDFLHNKG--- 131
Query: 477 IIHRDLKASNVLLDY--DMNP-KISDF--GMARIFAGSEGEVNTARIV---GTYGYMAPE 528
I HRDLK N+L ++ ++P KI DF G G ++T ++ G+ YMAPE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 529 ----YAMEG-LYSIKSDVFSFGVLLIEIITG 554
++ E +Y + D++S GV+L +++G
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 42/234 (17%)
Query: 350 DVATSNFSDSNMLGQGGFGPVYKGV--LSDGKEIAVKRLSSCSEQGNAEFTNEVLLILKL 407
DV ++ + + LG+G FG V + + + G+ +AVK + + A + I L
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSE----IQVL 65
Query: 408 QHKNL---------VKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINI 458
+H N V++L + +V+E + S+ D I ++ G L + R++
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPF--RLDH 119
Query: 459 VNG----IVKGILYLHEDSRLRIIHRDLKASNVLL---DYD--MNPKIS---------DF 500
+ I K + +LH + ++ H DLK N+L DY NPKI D
Sbjct: 120 IRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDI 176
Query: 501 GMARIFAGSEGEVNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
+ + + + + + +V T Y APE + +S DV+S G +LIE G
Sbjct: 177 KVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 92/222 (41%), Gaps = 18/222 (8%)
Query: 340 QDFYIDLETLDVATSN---FSDSNMLGQGGFGPVYKGVLSD-GKEIAVKRL--SSCSEQG 393
+DF ET T+ F LG G FG V + G A+K L +
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 394 NAEFT-NEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCW 452
E T NE ++ + LVKL D +V E++ + + L R+ G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSE 140
Query: 453 SKRINIVNGIVKGILYLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGE 512
IV YLH L +I+RDLK N+L+D +++DFG A+ G
Sbjct: 141 PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 513 VNTARIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLIEIITG 554
T + GT +APE + Y+ D ++ GVL+ E+ G
Sbjct: 194 -RTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 362 LGQGGFGPVYKGVLSD---GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G FG V++ + D G + AVK++ E++ L +V L G
Sbjct: 66 VGRGSFGEVHR--MKDKQTGFQCAVKKVRL-----EVFRVEELVACAGLSSPRIVPLYGA 118
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRII 478
+G + E + SL ++ ++ G L + + + ++G+ YLH RI+
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR---RIL 172
Query: 479 HRDLKASNVLLDYDMN-PKISDFGMARIFAG---SEGEVNTARIVGTYGYMAPEYAMEGL 534
H D+KA NVLL D + + DFG A + + I GT +MAPE M
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 535 YSIKSDVFSFGVLLIEIITG 554
K D++S +++ ++ G
Sbjct: 233 CDAKVDIWSSCCMMLHMLNG 252
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 38/228 (16%)
Query: 355 NFSDSNMLGQGGFGPVYKGVLSDG-KEIAVKRLSSCSEQ--GNAEFTNEVLLILKLQHKN 411
N+ +++G+G +G VY + K +A+K+++ E E+ ++ +L+
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 412 LVKLLGFCVDGD----EKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGIL 467
+++L + D ++L + + +S L + P L I+ ++ G
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTP---IFLTEEHIKTILYNLLLGEN 143
Query: 468 YLHEDSRLRIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEVN------------- 514
++HE IIHRDLK +N LL+ D + K+ DFG+AR SE + N
Sbjct: 144 FIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTI-NSEKDTNIVNDLEENEEPGP 199
Query: 515 ---------TARIVGTYGYMAPEYA-MEGLYSIKSDVFSFGVLLIEII 552
T+ +V T Y APE ++ Y+ D++S G + E++
Sbjct: 200 HNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 20/200 (10%)
Query: 362 LGQGGFGPVYKGVLSD---GKEIAVKRLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 418
+G+G FG V++ + D G + AVK++ E++ L +V L G
Sbjct: 82 VGRGSFGEVHR--MKDKQTGFQCAVKKVRL-----EVFRVEELVACAGLSSPRIVPLYGA 134
Query: 419 CVDGDEKLLVYEFMPNSSLDAILFDPRKRGLLCWSKRINIVNGIVKGILYLHEDSRLRII 478
+G + E + SL ++ ++ G L + + + ++G+ YLH RI+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR---RIL 188
Query: 479 HRDLKASNVLLDYD-MNPKISDFGMARIFAG---SEGEVNTARIVGTYGYMAPEYAMEGL 534
H D+KA NVLL D + DFG A + + I GT +MAPE M
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 535 YSIKSDVFSFGVLLIEIITG 554
K D++S +++ ++ G
Sbjct: 249 CDAKVDIWSSCCMMLHMLNG 268
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,642,185
Number of Sequences: 62578
Number of extensions: 753907
Number of successful extensions: 3855
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 1526
Number of HSP's gapped (non-prelim): 1115
length of query: 671
length of database: 14,973,337
effective HSP length: 105
effective length of query: 566
effective length of database: 8,402,647
effective search space: 4755898202
effective search space used: 4755898202
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)