Query 005894
Match_columns 671
No_of_seqs 418 out of 2670
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 10:20:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005894.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005894hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pz0_A Glycerophosphoryl diest 100.0 3.1E-48 1.1E-52 398.5 25.1 240 269-574 11-251 (252)
2 3qvq_A Phosphodiesterase OLEI0 100.0 4.2E-47 1.4E-51 390.0 27.7 241 269-574 9-250 (252)
3 1ydy_A Glycerophosphoryl diest 100.0 2.2E-47 7.5E-52 411.3 24.3 290 268-571 29-355 (356)
4 3ks6_A Glycerophosphoryl diest 100.0 4.4E-47 1.5E-51 389.3 23.3 242 269-574 2-244 (250)
5 2o55_A Putative glycerophospho 100.0 1.5E-46 5E-51 387.4 24.5 241 268-575 5-257 (258)
6 2otd_A Glycerophosphodiester p 100.0 1E-46 3.5E-51 386.1 22.9 239 269-572 6-245 (247)
7 2oog_A Glycerophosphoryl diest 100.0 4.8E-47 1.6E-51 397.0 19.6 249 268-573 22-280 (287)
8 3l12_A Putative glycerophospho 100.0 3.1E-45 1E-49 387.9 27.2 271 269-576 17-310 (313)
9 1zcc_A Glycerophosphodiester p 100.0 4.2E-47 1.4E-51 389.1 12.2 236 269-578 1-239 (248)
10 3ch0_A Glycerophosphodiester p 100.0 2.6E-45 8.8E-50 381.0 22.8 254 269-568 8-270 (272)
11 3no3_A Glycerophosphodiester p 100.0 5.8E-45 2E-49 370.8 21.3 230 269-574 4-236 (238)
12 3mz2_A Glycerophosphoryl diest 100.0 6.4E-44 2.2E-48 373.0 25.1 244 269-576 31-280 (292)
13 3i10_A Putative glycerophospho 100.0 8.2E-44 2.8E-48 368.8 22.9 252 269-576 17-276 (278)
14 1o1z_A GDPD, glycerophosphodie 100.0 8.4E-44 2.9E-48 361.4 19.5 218 269-570 12-233 (234)
15 1vd6_A Glycerophosphoryl diest 100.0 2.5E-43 8.5E-48 355.7 17.8 215 268-570 6-222 (224)
16 1xx1_A Smase I, sphingomyelina 100.0 1E-34 3.5E-39 303.2 10.1 232 269-576 5-266 (285)
17 1ydy_A Glycerophosphoryl diest 100.0 4.5E-31 1.5E-35 284.1 15.0 248 4-266 54-354 (356)
18 2pz0_A Glycerophosphoryl diest 100.0 5.7E-31 2E-35 270.0 10.6 197 5-266 36-247 (252)
19 2otd_A Glycerophosphodiester p 100.0 6.6E-30 2.3E-34 261.3 16.6 199 4-267 30-244 (247)
20 3qvq_A Phosphodiesterase OLEI0 100.0 8.3E-30 2.8E-34 261.3 14.7 199 4-267 33-247 (252)
21 2oog_A Glycerophosphoryl diest 100.0 5.7E-30 1.9E-34 267.6 11.3 204 6-267 50-278 (287)
22 3ch0_A Glycerophosphodiester p 100.0 8.2E-29 2.8E-33 256.8 11.1 208 4-264 32-270 (272)
23 3ks6_A Glycerophosphoryl diest 100.0 1.3E-28 4.4E-33 252.1 11.2 199 4-267 26-241 (250)
24 2o55_A Putative glycerophospho 100.0 2.8E-28 9.7E-33 250.8 13.4 197 4-268 32-254 (258)
25 3l12_A Putative glycerophospho 100.0 2.6E-28 9E-33 258.0 13.3 224 4-267 41-305 (313)
26 1zcc_A Glycerophosphodiester p 99.9 2.5E-28 8.4E-33 249.8 11.0 192 4-267 25-232 (248)
27 3mz2_A Glycerophosphoryl diest 99.9 1.9E-27 6.4E-32 248.4 12.1 211 5-268 57-276 (292)
28 3no3_A Glycerophosphodiester p 99.9 1.3E-26 4.5E-31 235.4 8.8 185 4-266 30-232 (238)
29 1o1z_A GDPD, glycerophosphodie 99.9 1.8E-26 6.2E-31 233.8 8.2 189 4-265 36-232 (234)
30 3i10_A Putative glycerophospho 99.9 4.9E-25 1.7E-29 228.0 12.1 214 5-267 42-271 (278)
31 1vd6_A Glycerophosphoryl diest 99.9 5.8E-25 2E-29 221.3 8.5 177 4-265 31-221 (224)
32 3rlg_A Sphingomyelin phosphodi 99.9 2.2E-21 7.5E-26 197.7 14.9 228 270-575 29-282 (302)
33 1xx1_A Smase I, sphingomyelina 99.8 9E-23 3.1E-27 212.8 1.9 201 5-267 24-261 (285)
34 3rlg_A Sphingomyelin phosphodi 99.4 3.4E-14 1.1E-18 145.0 0.7 204 6-268 47-279 (302)
35 1djx_A PLC-D1, phosphoinositid 92.1 0.084 2.9E-06 60.2 4.0 48 274-321 178-228 (624)
36 2zkm_X 1-phosphatidylinositol- 91.5 0.11 3.7E-06 60.9 4.2 49 273-321 325-378 (799)
37 3qr0_A Phospholipase C-beta (P 90.3 0.15 5.3E-06 59.5 3.9 49 273-321 336-387 (816)
38 3kts_A Glycerol uptake operon 90.0 4.4 0.00015 38.7 13.1 144 384-567 37-184 (192)
39 3ohm_B 1-phosphatidylinositol- 87.8 0.23 8E-06 58.4 3.0 49 273-321 329-382 (885)
40 1vkf_A Glycerol uptake operon 87.6 5.7 0.00019 37.7 11.9 140 385-567 40-182 (188)
41 3h4x_A Phosphatidylinositol-sp 83.9 2.2 7.5E-05 43.9 7.5 49 270-322 32-81 (339)
42 3vnd_A TSA, tryptophan synthas 77.7 12 0.00042 37.5 10.6 26 282-307 28-55 (267)
43 3glc_A Aldolase LSRF; TIM barr 72.4 10 0.00036 38.6 8.6 152 132-302 93-255 (295)
44 3fok_A Uncharacterized protein 67.4 6.3 0.00022 40.2 5.5 93 205-302 166-271 (307)
45 3nvt_A 3-deoxy-D-arabino-heptu 59.0 69 0.0024 33.8 11.9 20 205-224 239-258 (385)
46 2qjg_A Putative aldolase MJ040 58.1 20 0.00069 35.6 7.4 95 205-303 135-236 (273)
47 1to3_A Putative aldolase YIHT; 55.9 21 0.0007 36.5 7.1 90 205-302 145-252 (304)
48 3nav_A Tryptophan synthase alp 53.5 1.8E+02 0.0062 28.9 14.1 25 283-307 33-57 (271)
49 1zco_A 2-dehydro-3-deoxyphosph 50.4 1.4E+02 0.0048 29.5 12.0 92 107-224 36-139 (262)
50 3q58_A N-acetylmannosamine-6-p 50.3 1.8E+02 0.0062 28.0 15.8 146 390-561 7-155 (229)
51 3a24_A Alpha-galactosidase; gl 49.5 35 0.0012 38.5 8.1 83 476-566 306-398 (641)
52 3a24_A Alpha-galactosidase; gl 47.2 16 0.00056 41.2 5.0 89 205-333 350-438 (641)
53 1vkf_A Glycerol uptake operon 46.9 37 0.0013 32.1 6.7 57 509-573 45-101 (188)
54 3kts_A Glycerol uptake operon 44.1 60 0.002 30.8 7.6 58 509-574 43-101 (192)
55 2d73_A Alpha-glucosidase SUSB; 43.5 44 0.0015 38.2 7.7 85 476-564 368-471 (738)
56 1w8s_A FBP aldolase, fructose- 41.2 61 0.0021 32.1 7.7 94 205-302 128-229 (263)
57 4e38_A Keto-hydroxyglutarate-a 40.5 2.1E+02 0.0072 27.7 11.3 130 390-566 24-157 (232)
58 2bdq_A Copper homeostasis prot 40.2 85 0.0029 30.5 8.2 108 129-257 37-152 (224)
59 3igs_A N-acetylmannosamine-6-p 39.1 2.7E+02 0.0092 26.8 16.0 146 390-561 7-155 (232)
60 2p10_A MLL9387 protein; putati 38.8 39 0.0013 34.0 5.7 44 206-265 154-197 (286)
61 1twd_A Copper homeostasis prot 38.3 81 0.0028 31.2 7.8 117 120-258 20-148 (256)
62 2rbg_A Putative uncharacterize 37.8 74 0.0025 27.3 6.3 39 510-561 47-92 (126)
63 2wqp_A Polysialic acid capsule 35.4 2.7E+02 0.0092 28.8 11.7 17 287-303 219-235 (349)
64 1x7f_A Outer surface protein; 34.5 1.8E+02 0.0061 30.6 10.2 161 385-566 71-254 (385)
65 2d73_A Alpha-glucosidase SUSB; 29.1 30 0.001 39.6 3.4 51 205-260 421-471 (738)
66 3f4w_A Putative hexulose 6 pho 28.6 2.5E+02 0.0084 26.0 9.5 95 449-562 39-134 (211)
67 1uas_A Alpha-galactosidase; TI 27.7 2.4E+02 0.0083 29.0 10.0 53 509-564 76-132 (362)
68 3iv3_A Tagatose 1,6-diphosphat 26.8 1.9E+02 0.0064 29.8 8.6 93 205-303 150-279 (332)
69 2yxb_A Coenzyme B12-dependent 26.8 2.1E+02 0.0072 25.8 8.2 39 510-562 87-128 (161)
70 3sz8_A 2-dehydro-3-deoxyphosph 25.8 5.1E+02 0.017 25.9 13.1 119 173-312 103-249 (285)
71 3l6u_A ABC-type sugar transpor 24.3 2.3E+02 0.0077 27.2 8.7 73 206-309 29-101 (293)
72 1tqj_A Ribulose-phosphate 3-ep 23.8 32 0.0011 33.4 2.1 28 283-313 16-43 (230)
73 3o6c_A PNP synthase, pyridoxin 22.6 2.3E+02 0.008 27.9 7.9 42 510-565 114-155 (260)
74 1vli_A Spore coat polysacchari 22.6 2.6E+02 0.0089 29.3 8.9 17 287-303 231-247 (385)
75 2xn2_A Alpha-galactosidase; hy 22.6 2E+02 0.0068 33.0 8.7 20 204-223 398-417 (732)
76 3lab_A Putative KDPG (2-keto-3 22.0 1.9E+02 0.0066 27.8 7.2 107 423-566 26-142 (217)
77 3m47_A Orotidine 5'-phosphate 21.9 2.9E+02 0.0098 26.5 8.6 78 491-572 90-169 (228)
78 3a5v_A Alpha-galactosidase; be 21.5 3.5E+02 0.012 28.3 9.8 52 509-564 76-131 (397)
79 3usb_A Inosine-5'-monophosphat 21.5 7.8E+02 0.027 26.5 13.0 37 514-564 353-390 (511)
80 2isw_A Putative fructose-1,6-b 21.4 6.5E+02 0.022 25.5 12.4 146 387-558 3-169 (323)
81 1m5w_A Pyridoxal phosphate bio 21.3 2.8E+02 0.0096 27.0 8.1 37 510-560 117-153 (243)
82 3tb6_A Arabinose metabolism tr 20.8 3.3E+02 0.011 26.0 9.1 75 205-307 35-109 (298)
83 3g8r_A Probable spore coat pol 20.8 3.6E+02 0.012 27.8 9.4 19 289-307 210-228 (350)
84 3m9w_A D-xylose-binding peripl 20.2 2.1E+02 0.0073 27.9 7.6 43 205-257 22-64 (313)
85 1pv8_A Delta-aminolevulinic ac 20.1 5.3E+02 0.018 26.2 10.1 137 422-572 173-328 (330)
86 1ccw_A Protein (glutamate muta 20.0 2.7E+02 0.0093 24.2 7.4 44 510-563 72-120 (137)
No 1
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=3.1e-48 Score=398.49 Aligned_cols=240 Identities=23% Similarity=0.286 Sum_probs=203.0
Q ss_pred CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF 348 (671)
Q Consensus 269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~ 348 (671)
+|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+ ++| .
T Consensus 11 ~p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~-----------------~~g-~ 72 (252)
T 2pz0_A 11 KTLVIAHRGDSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTN-----------------GEG-F 72 (252)
T ss_dssp CCEEEEETTTTTTSCTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBSTTTSS-----------------CCS-B
T ss_pred CceEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEEEEecCCeEEEEcCCcccccCC-----------------CCc-c
Confidence 7899999999999999999999999999999999999999999999999999999999 788 8
Q ss_pred cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894 349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT 428 (671)
Q Consensus 349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~ 428 (671)
|.++||+||++|+++ .||+ +.+ .+++||||+|+|+++++.+ ++++||||..... ...++++|+
T Consensus 73 v~~~t~~eL~~l~~~--~~~~---------~~~-~~~~iPtL~evL~~~~~~~-~~l~iEiK~~~~~----~~~~~~~v~ 135 (252)
T 2pz0_A 73 VKDFTLEEIKKLDAG--IKFG---------EKF-AGERIPTLYEVFELIGDKD-FLVNIEIKSGIVL----YPGIEEKLI 135 (252)
T ss_dssp GGGSCHHHHTTSCSS--TTTC---------GGG-TTCCCCBHHHHHHHHTTSC-CEEEEEECCSSCC----CTTHHHHHH
T ss_pred hhhCcHHHHhhcCCC--CCCC---------CCC-CCCcCCCHHHHHHHhhhcC-CeEEEEeCCCCcc----cHHHHHHHH
Confidence 999999999999987 4443 344 3589999999999998632 5899999976421 235889999
Q ss_pred HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894 429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT 507 (671)
Q Consensus 429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~ 507 (671)
++++++++. ++++|+||+++.|+++++. |++++++++.....+ ...++..+++ ..+.+.. ..
T Consensus 136 ~~l~~~~~~----~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~--------~~~~~~~~~~--~~i~~~~---~~ 198 (252)
T 2pz0_A 136 KAIKEYNFE----ERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVE--------PWHMALRMEA--YSLHPFY---FN 198 (252)
T ss_dssp HHHHHTTCT----TTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCSS--------THHHHHHTTC--SEEEEBG---GG
T ss_pred HHHHhcCCC----CCEEEEeCCHHHHHHHHHHCCCCCEEEEecCcccc--------HHHHHHHcCC--eEEecch---hc
Confidence 999999987 7999999999999999999 999999998654322 1234444444 3455543 34
Q ss_pred cchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhc
Q 005894 508 NATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSK 574 (671)
Q Consensus 508 ~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~ 574 (671)
.++++|+.+|++|+.|++||+|++. ++.+++ ++||||||||+|+.+.+++++.
T Consensus 199 ~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GvdgIiTD~P~~~~~~l~~~ 251 (252)
T 2pz0_A 199 IIPELVEGCKKNGVKLFPWTVDRKE-------------DMERMI-KAGVDGIITDDPETLINLVRKG 251 (252)
T ss_dssp CCHHHHHHHHHTTCEECCBCCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHC--
T ss_pred CCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-HcCCCEEEcCCHHHHHHHHhhc
Confidence 4689999999999999999999987 888885 9999999999999999988643
No 2
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=100.00 E-value=4.2e-47 Score=390.02 Aligned_cols=241 Identities=16% Similarity=0.196 Sum_probs=200.9
Q ss_pred CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF 348 (671)
Q Consensus 269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~ 348 (671)
+|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+ ++| .
T Consensus 9 ~p~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~-----------------~~~-~ 70 (252)
T 3qvq_A 9 LPQVIAHRGSSGQAPENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDDYLSRTTD-----------------GDG-L 70 (252)
T ss_dssp CCSEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECCCSBSTTTSS-----------------CCS-B
T ss_pred CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCcEEEECCCccccccC-----------------CCc-e
Confidence 6899999999999999999999999999999999999999999999999999999999 778 8
Q ss_pred cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894 349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT 428 (671)
Q Consensus 349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~ 428 (671)
|.++||+||++|+++ .||+ +.+ .+++||||+|+|+++++.+ ++++||||...... ..+++.+.
T Consensus 71 v~~~t~~el~~l~~~--~~~~---------~~~-~~~~iptL~evl~~~~~~~-~~l~iEiK~~~~~~----~~~~~~v~ 133 (252)
T 3qvq_A 71 IYKTPLAELKQLDAG--SWKG---------QEY-QQETIPTLLEAIEVISQYG-MGLNLELKPCEGLE----EETIAASV 133 (252)
T ss_dssp GGGSCHHHHTTSCSS--TTTC---------GGG-TTCCCCBHHHHHHHHHHTT-CEEEEEECCCTTCH----HHHHHHHH
T ss_pred eecCcHHHHhcCCCC--CccC---------ccC-CCCcCcCHHHHHHHHhccC-cEEEEEecCCCCcc----HHHHHHHH
Confidence 999999999999987 4443 344 3589999999999998543 58999999643211 14678889
Q ss_pred HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894 429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT 507 (671)
Q Consensus 429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~ 507 (671)
+++++++... ++++++||+++.|+++++. |++++++++..... . ...++...+. ..+++.. ..
T Consensus 134 ~~l~~~~~~~---~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~----~----~~~~~~~~~~--~~i~~~~---~~ 197 (252)
T 3qvq_A 134 EVLKQHWPQD---LPLLFSSFNYFALVSAKALWPEIARGYNVSAIPS----A----WQERLEHLDC--AGLHIHQ---SF 197 (252)
T ss_dssp HHHHHHSCTT---SCEEEEESCHHHHHHHHHHCTTSCEEEECSSCCT----T----HHHHHHHHTC--SEEEEEG---GG
T ss_pred HHHHHhCccc---CCEEEEeCCHHHHHHHHHHCCCCcEEEEEecCch----h----HHHHHHHcCC--eEEecch---hh
Confidence 9999987642 5899999999999999999 99999999854211 1 2234444554 3455533 34
Q ss_pred cchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhc
Q 005894 508 NATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSK 574 (671)
Q Consensus 508 ~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~ 574 (671)
.++++|+.+|++|++|++||+|++. ++.+++ ++||||||||+|+.+.+++++.
T Consensus 198 ~~~~~v~~~~~~G~~v~~WTvn~~~-------------~~~~l~-~~GVdgIiTD~P~~~~~~l~~~ 250 (252)
T 3qvq_A 198 FDVQQVSDIKAAGYKVLAFTINDES-------------LALKLY-NQGLDAVFSDYPQKIQSAIDSH 250 (252)
T ss_dssp CCHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HTTCCEEEESSHHHHHHHHHHC
T ss_pred CCHHHHHHHHHCCCEEEEEcCCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHHHh
Confidence 5689999999999999999999987 899885 9999999999999999998754
No 3
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=100.00 E-value=2.2e-47 Score=411.30 Aligned_cols=290 Identities=22% Similarity=0.289 Sum_probs=218.1
Q ss_pred CCceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccc
Q 005894 268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGI 347 (671)
Q Consensus 268 ~~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~ 347 (671)
.+|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+....|++|... +|.|
T Consensus 29 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~f~~~~~~-----~g~~- 102 (356)
T 1ydy_A 29 NEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARK-----DGRY- 102 (356)
T ss_dssp CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBCTTTBSHHHHSTTCCCT-----TSCC-
T ss_pred CCceEEEeCCCCCCCCcchHHHHHHHHHcCCCEEEeeeEECCCCcEEEeCCChHHhhcCccccccccccc-----CCCc-
Confidence 3789999999999999999999999999999999999999999999999999999999977778887653 3567
Q ss_pred ccccCCHHHHhccCCCcCCCCCCC------CCCCCCCcccccCCcccCHHHHHHHHhcc-----CcccEEEEecCchhhh
Q 005894 348 FSFDLTWTEIQSLKPQISSPFDKS------NPPIIRNPEAKNKGKFVTLDGFLEFAKTK-----AVSGVLININNAAYLA 416 (671)
Q Consensus 348 ~i~dlT~~EL~~L~~~~~~~f~~~------~~~~~r~~~~~~~~~ipTLeEvL~~~~~~-----~~~~i~IeIK~~~~~~ 416 (671)
.|.++||+||++|+++ .||+.. .+ ..|.+....+++||||+|+|+++++. ..++++||||......
T Consensus 103 ~v~d~T~~eL~~l~~~--~~~~~~~g~~~~~~-~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~ 179 (356)
T 1ydy_A 103 YAIDFTLDEIKSLKFT--EGFDIENGKKVQTY-PGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHH 179 (356)
T ss_dssp BGGGSCHHHHHHSCBC--SCEEEETTEEEESS-TTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHHHH
T ss_pred chhhCcHHHHHhCCCC--cccccccccccccc-ccccccccCCCcCCCHHHHHHHHHHhhhcccCCceEEEeecCccccc
Confidence 8999999999999987 343200 00 01222223468999999999999852 2368999999875432
Q ss_pred hhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC------CCceEEEEeecccC-C--------------
Q 005894 417 SKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV------PAYKKVLHIRKEVS-A-------------- 475 (671)
Q Consensus 417 ~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~------p~~~~~~l~~~~~~-d-------------- 475 (671)
..+..++++|+++++++++... .++|+|+|||+++|+++|+. |++++++++..... .
T Consensus 180 -~~~~~~~~~v~~~l~~~~~~~~-~~~v~i~SF~~~~l~~~~~~~~p~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 257 (356)
T 1ydy_A 180 -QEGKDIAAKTLEVLKKYGYTGK-DDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYN 257 (356)
T ss_dssp -HTTCCHHHHHHHHHHHTTCCST-TSSBEEEESCHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEECTTSCEEECC
T ss_pred -ccchhHHHHHHHHHHHcCCCCC-CCCEEEEcCCHHHHHHHHhhcccccCCCceEEEEeccCcccccccccccccccccc
Confidence 2345789999999999998421 16999999999999999986 88999999863210 0
Q ss_pred ----CChhHHHHHHHHHHHhcCCceeeecCC-CcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHH
Q 005894 476 ----APREVVEEIKKYASAVTVTRTSVISTT-ESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATF 550 (671)
Q Consensus 476 ----~~~~~l~~i~~~a~~v~~~~~~v~~~~-~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~ 550 (671)
.....++++..+++++++....+.+.. .......+++|+++|++|+.|++||+|++. ++ +|+.|+...++++
T Consensus 258 ~~~~~~~~~l~~~~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~--l~-~~~~d~~~~~~~~ 334 (356)
T 1ydy_A 258 YDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDK--LP-EYTPDVNQLYDAL 334 (356)
T ss_dssp CGGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCBCBCTTS--CC-TTCSSHHHHHHHH
T ss_pred hhhhcchhhHHHHHhhCeEEccCHHHhccccccccccCCHHHHHHHHHCCCEEEEEEECccc--cc-ccccCHHHHHHHH
Confidence 012344555445555554433222110 000123478999999999999999999984 33 4667777443654
Q ss_pred HhhcCccEEEECChhhHHHHH
Q 005894 551 AQGVGVDGITTEFPATASKYF 571 (671)
Q Consensus 551 l~~~GVDgIiTD~P~~~~~~~ 571 (671)
+.++||||||||+|+.+.+++
T Consensus 335 l~~~GVDgIiTD~P~~~~~~l 355 (356)
T 1ydy_A 335 YNKAGVNGLFTDFPDKAVKFL 355 (356)
T ss_dssp HTTSCCSEEEESCHHHHHHHH
T ss_pred HHHcCCCEEEeCCHHHHHHhh
Confidence 469999999999999998876
No 4
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=100.00 E-value=4.4e-47 Score=389.33 Aligned_cols=242 Identities=13% Similarity=0.114 Sum_probs=203.0
Q ss_pred CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF 348 (671)
Q Consensus 269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~ 348 (671)
+|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+ ++| .
T Consensus 2 mp~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~-----------------~~g-~ 63 (250)
T 3ks6_A 2 MTRIASHRGGTLEFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTLDATTD-----------------MTG-A 63 (250)
T ss_dssp CCEEEEETTTHHHHCTTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBS-----------------CCS-B
T ss_pred CceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEEeEccCCCEEEECCCccccccC-----------------CCC-e
Confidence 6899999999999999999999999999999999999999999999999999999999 778 8
Q ss_pred cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894 349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT 428 (671)
Q Consensus 349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~ 428 (671)
|.++||+||++|+++.. .+++||||+|+|+++++.+ +.++||||..... .....++++++
T Consensus 64 v~~~t~~el~~l~~~~~-----------------~~~~iptL~evl~~~~~~~-~~l~iEiK~~~~~--~~~~~~~~~v~ 123 (250)
T 3ks6_A 64 IVDMTLAKVKTATIRYG-----------------AGSHPMTLEELCALYVDSH-VNFRCEIKPGVDG--LPYEGFVALVI 123 (250)
T ss_dssp GGGSCHHHHHHCCBTTS-----------------TTCCCEEHHHHHHHHTTCS-CEEEEEECCCTTS--CCCTTHHHHHH
T ss_pred eecCcHHHHhcCCCCCC-----------------CCccCcCHHHHHHHHhccC-cEEEEEeCCCccc--CcchHHHHHHH
Confidence 99999999999998721 2478999999999998432 5899999985321 12246899999
Q ss_pred HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894 429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT 507 (671)
Q Consensus 429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~ 507 (671)
++++++++. ++++++||+++.|+++++. |+++++++..... ....+..+..++...++ ..+++.. ..
T Consensus 124 ~~l~~~~~~----~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~---~~ 191 (250)
T 3ks6_A 124 AGLERHSML----ERTTFSSFLLASMDELWKATTRPRLWLVSPSVL---QQLGPGAVIETAIAHSI--HEIGVHI---DT 191 (250)
T ss_dssp HHHHHTTCG----GGEEEEESCHHHHHHHHHHCCSCEEEEECHHHH---HHHHHHHHHHHHHHTTC--CEEEEEG---GG
T ss_pred HHHHhcCCC----CCEEEEeCCHHHHHHHHHHCCCCcEEEEecccc---cccchhHHHHHHHhcCC--CEEecch---hh
Confidence 999999987 7999999999999999999 9999987653210 01123345556666665 3455532 44
Q ss_pred cchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhc
Q 005894 508 NATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSK 574 (671)
Q Consensus 508 ~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~ 574 (671)
.++++|+.+|++|++|++||+|++. ++++++ ++||||||||+|+.+.+++++.
T Consensus 192 ~~~~~v~~~~~~G~~V~~WTvn~~~-------------~~~~l~-~~GVDgIiTD~P~~~~~~~~~~ 244 (250)
T 3ks6_A 192 ADAGLMAQVQAAGLDFGCWAAHTPS-------------QITKAL-DLGVKVFTTDRPTLAIALRTEH 244 (250)
T ss_dssp CCHHHHHHHHHTTCEEEEECCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEeCCCHH-------------HHHHHH-HcCCCEEEcCCHHHHHHHHHHh
Confidence 5789999999999999999999997 899885 9999999999999999998753
No 5
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=100.00 E-value=1.5e-46 Score=387.42 Aligned_cols=241 Identities=13% Similarity=0.117 Sum_probs=199.9
Q ss_pred CCceEEeccCCC--CCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCC---CcccccCcccccccccccccccc
Q 005894 268 DRPLIITHNGAS--GVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESP---DLIGKTTAATVFMSKATSVPEIQ 342 (671)
Q Consensus 268 ~~p~iIAHRG~s--~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~---~L~rtT~~~~~f~~r~~~~~~~~ 342 (671)
.+|+||||||++ +.+||||++||++|++.|||+||||||+||||++||+||. +|+|+|+
T Consensus 5 ~~~~iiaHRG~~~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~---------------- 68 (258)
T 2o55_A 5 IIPKIVGHRGVGKEGLAPENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKD---------------- 68 (258)
T ss_dssp CCCEEEEETTTTTSTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTT----------------
T ss_pred cCceEEECCCCCCCCCCCccHHHHHHHHHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCC----------------
Confidence 478999999999 9999999999999999999999999999999999999999 9999999
Q ss_pred cccccccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccC-cccEEEEecCchhhhhhcCC
Q 005894 343 KERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKA-VSGVLININNAAYLASKKGL 421 (671)
Q Consensus 343 ~~~G~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~-~~~i~IeIK~~~~~~~~~~~ 421 (671)
++| .|.++||+||++|+++ .+++||||+|+|+++++.+ .++++||||..... ....
T Consensus 69 -~~g-~v~~~t~~eL~~l~~~-------------------~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~--~~~~ 125 (258)
T 2o55_A 69 -GTS-RIGDLSLEELKRLDVG-------------------GGHTIPSLEELFVAIEEQKFNLKLNLELKGEEWK--RKES 125 (258)
T ss_dssp -TTC-BGGGSCHHHHTTCBSS-------------------SSCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSS--STTS
T ss_pred -CCe-ehhhCcHHHHhhcCCC-------------------CCCccCCHHHHHHHhhhhcCceEEEEEEccCCcc--ccch
Confidence 778 8999999999999976 2579999999999998741 25899999975421 0124
Q ss_pred cHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEe-ecccCCCChhHHHHHHHHHHHhcCCceeee
Q 005894 422 GVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHI-RKEVSAAPREVVEEIKKYASAVTVTRTSVI 499 (671)
Q Consensus 422 ~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~-~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~ 499 (671)
.++++++++++++++. ++++|+||+++.|+.++++ |++++++++ .....+. .. ....+...++ ..++
T Consensus 126 ~~~~~v~~~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~--~~---~~~~~~~~~~--~~v~ 194 (258)
T 2o55_A 126 GDHQRLLLLVEKYHMQ----ERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQPTP--LD---FVEQACYGDA--NGVS 194 (258)
T ss_dssp SHHHHHHHHHHTTTCG----GGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCCCC--TT---HHHHHHHTTC--SEEE
T ss_pred HHHHHHHHHHHHcCCC----CCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCCCH--HH---HHHHHHhcCC--eEEe
Confidence 6889999999999987 7999999999999999998 999999998 4322111 11 1112344444 3454
Q ss_pred cCCCcccccchHHHHHHHHcCCeEEEEec----cCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhcC
Q 005894 500 STTESFTTNATNILRDLHSANISVYISAL----RNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKC 575 (671)
Q Consensus 500 ~~~~~~~~~~~~~V~~~~~~Gl~V~vwtv----n~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~~ 575 (671)
+.. ...++++|+.+|++|+.|++||+ |++. ++.+++ ++||||||||+|..+.+++++.|
T Consensus 195 ~~~---~~~~~~~v~~~~~~G~~v~~wTv~~~~n~~~-------------~~~~l~-~~GvdgI~TD~p~~~~~~l~~~~ 257 (258)
T 2o55_A 195 MLF---HYLTKEQVCTAHEKGLSVTVWMPWIFDDSEE-------------DWKKCL-ELQVDLICSNYPFGLMNFLSNIS 257 (258)
T ss_dssp EEG---GGCCHHHHHHHHHTTCEEEEECCTTCCCCHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHTC--
T ss_pred cCh---hhcCHHHHHHHHHCCCEEEEeeCCCCCCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHHHhc
Confidence 432 34568999999999999999999 7776 888884 99999999999999999999888
No 6
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=100.00 E-value=1e-46 Score=386.09 Aligned_cols=239 Identities=16% Similarity=0.179 Sum_probs=196.1
Q ss_pred CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF 348 (671)
Q Consensus 269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~ 348 (671)
+|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+ ++| .
T Consensus 6 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~R~t~-----------------~~g-~ 67 (247)
T 2otd_A 6 YPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSN-----------------GWG-V 67 (247)
T ss_dssp CCSEEETTTTTTSSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSS-----------------CCS-B
T ss_pred CCeEEECCCCCCCCCchhHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCccccCC-----------------CCc-c
Confidence 5789999999999999999999999999999999999999999999999999999999 788 8
Q ss_pred cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894 349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT 428 (671)
Q Consensus 349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~ 428 (671)
|.++||+||++|+++ .||+ +.+ .+++||||+|+|+++++.+ +.++||||...... ..++++++
T Consensus 68 v~~~t~~eL~~l~~g--~~~~---------~~~-~~~~iptL~evl~~~~~~~-~~l~iEiK~~~~~~----~~~~~~v~ 130 (247)
T 2otd_A 68 AGELNWQDLLRVDAG--SWYS---------KAF-KGEPLPLLSQVAERCREHG-MMANIEIKPTTGTG----PLTGKMVA 130 (247)
T ss_dssp GGGSCHHHHTTCCSS--TTTC---------GGG-TTCCCCBHHHHHHHHHHTT-CEEEEEECCCTTCH----HHHHHHHH
T ss_pred HhhCcHHHHhhCCCC--CccC---------CCC-CCCcCCCHHHHHHHHHhcC-CEEEEEECCCCCcc----hHHHHHHH
Confidence 999999999999987 4444 334 3589999999999998532 58999999764321 13667899
Q ss_pred HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894 429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT 507 (671)
Q Consensus 429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~ 507 (671)
++++++.... .+++++||+++.|+.+++. |++++++++.....+ +..++...++ ..+++.. ..
T Consensus 131 ~~l~~~~~~~---~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~--------~~~~~~~~~~--~~i~~~~---~~ 194 (247)
T 2otd_A 131 LAARQLWAGM---TPPLLSSFEIDALEAAQQAAPELPRGLLLDEWRDD--------WRELTARLGC--VSIHLNH---KL 194 (247)
T ss_dssp HHHHHHTTTS---CCCEEEESCHHHHHHHHHHCTTSCEEEEESSCCTT--------HHHHHHHHTC--SEEEEEG---GG
T ss_pred HHHHHHhcCc---CCEEEEcCCHHHHHHHHHHCCCCCEEEEecCCccc--------HHHHHHHcCC--eEEecCh---Hh
Confidence 9998872111 3899999999999999998 999999998643211 1234444544 3455433 33
Q ss_pred cchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHH
Q 005894 508 NATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFR 572 (671)
Q Consensus 508 ~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~ 572 (671)
.++++|+.+|++|+.|++||+|++. ++.+++ ++||||||||+|..+.++++
T Consensus 195 ~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GvdgI~TD~p~~~~~~l~ 245 (247)
T 2otd_A 195 LDKARVMQLKDAGLRILVYTVNKPQ-------------HAAELL-RWGVDCICTDAIDVIGPNFT 245 (247)
T ss_dssp CCHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HHTCSEEEESCTTTSCTTCC
T ss_pred CCHHHHHHHHHCCCEEEEEccCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHh
Confidence 4689999999999999999999987 888885 99999999999998876543
No 7
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=100.00 E-value=4.8e-47 Score=397.01 Aligned_cols=249 Identities=22% Similarity=0.250 Sum_probs=200.5
Q ss_pred CCceEEeccCCCCCCCchhHHHHHHH-HHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccc
Q 005894 268 DRPLIITHNGASGVYAGCTDLAYQQA-VDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERG 346 (671)
Q Consensus 268 ~~p~iIAHRG~s~~~PENTl~Af~~A-i~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G 346 (671)
.+|+||||||+++.+||||++||++| ++.|||+||||||+||||++||+||.+|+|+|+ ++|
T Consensus 22 ~~~~iiAHRG~~~~~PENTl~Af~~A~~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~-----------------~~g 84 (287)
T 2oog_A 22 ERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTN-----------------GHG 84 (287)
T ss_dssp CSSEEEETTTTTTTSCSSSHHHHHHHHHTSCCSEEEEEEEECTTCCEEECSSSBSTTTSS-----------------CCS
T ss_pred CcceEEecCCCCCCCCchhHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCChhcccCC-----------------CCe
Confidence 37899999999999999999999999 699999999999999999999999999999999 788
Q ss_pred cccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHH
Q 005894 347 IFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDA 426 (671)
Q Consensus 347 ~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~ 426 (671)
.|.++||+||++|+++ .||+.. .|..+.+.+ .+++||||+|+|+++++. ++++||||.... ...++++
T Consensus 85 -~v~d~T~~eL~~l~~~--~~f~~~-~p~~~~~~~-~~~~iPtL~evL~~~~~~--~~l~IEiK~~~~-----~~~~~~~ 152 (287)
T 2oog_A 85 -KVEDYTLDELKQLDAG--SWFNKK-YPKYARASY-KNAKVPTLDEILERYGPN--ANYYIETKSPDV-----YPGMEEQ 152 (287)
T ss_dssp -BGGGSCHHHHTTSCSS--HHHHHH-CGGGCCGGG-TTCCCCBHHHHHHHHCTT--SCEEEECCCTTT-----STTHHHH
T ss_pred -ehhhCcHHHHHhcCCC--cccCcc-Ccccccccc-CCccCCCHHHHHHhhCcC--ceEEEEECCCCC-----cchHHHH
Confidence 8999999999999987 333210 001112233 358999999999999764 689999997542 2257899
Q ss_pred HHHHHHhcCC-------CCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccC-CCChhHHHHHHHHHHHhcCCcee
Q 005894 427 VTKALSNATF-------DKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVS-AAPREVVEEIKKYASAVTVTRTS 497 (671)
Q Consensus 427 v~~~l~~~~~-------~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~-d~~~~~l~~i~~~a~~v~~~~~~ 497 (671)
|+++++++++ . ++++|+||+++.|+++++. |++++++++..... ......++.+..++ ..
T Consensus 153 v~~~l~~~~~~~~~~~~~----~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~ 221 (287)
T 2oog_A 153 LLASLKKHHLLNNNKLKN----GHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYA-------IG 221 (287)
T ss_dssp HHHHHHHTTCSSHHHHHT----TSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTC-------SE
T ss_pred HHHHHHHcCCcccccCCC----CCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCcccccCHHHHHHHhhhh-------eE
Confidence 9999999998 5 6999999999999999998 99999999864321 12222333322222 22
Q ss_pred eecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHh
Q 005894 498 VISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRS 573 (671)
Q Consensus 498 v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~ 573 (671)
+.+.. ...++++|+.+|++|+.|++||+|++. ++.+++ ++||||||||+|+.+.++++.
T Consensus 222 v~~~~---~~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GVdgIiTD~P~~~~~~~~~ 280 (287)
T 2oog_A 222 LGPDY---TDLTEQNTHHLKDLGFIVHPYTVNEKA-------------DMLRLN-KYGVDGVFTNFADKYKEVIKE 280 (287)
T ss_dssp EEEBG---GGCCHHHHHHHHHTTCEECCBCCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHHC
T ss_pred EcccH---hhcCHHHHHHHHHCCCeEEEEeCCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHhc
Confidence 33322 334678999999999999999999987 899885 999999999999999998865
No 8
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=100.00 E-value=3.1e-45 Score=387.92 Aligned_cols=271 Identities=15% Similarity=0.195 Sum_probs=204.3
Q ss_pred CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccc--cccc
Q 005894 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQ--KERG 346 (671)
Q Consensus 269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~--~~~G 346 (671)
+++||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+..+ ++. .+.+
T Consensus 17 ~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~~----------~G~~~~~~~ 86 (313)
T 3l12_A 17 VVRVIGHRGARGVMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRDG----------QGHWLTGAE 86 (313)
T ss_dssp BCEEEEETTTTTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTCBCT----------TSCBCCSSC
T ss_pred CeEEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEECCchhcccccccC----------CCcccCCCC
Confidence 6889999999999999999999999999999999999999999999999999999965211 000 0112
Q ss_pred cccccCCHHHHhccCCCcCC---CCCCCCCCCCCCcccccCCcccCHHHHHHHHhccC--cccEEEEecCchhhhhh--c
Q 005894 347 IFSFDLTWTEIQSLKPQISS---PFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKA--VSGVLININNAAYLASK--K 419 (671)
Q Consensus 347 ~~i~dlT~~EL~~L~~~~~~---~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~--~~~i~IeIK~~~~~~~~--~ 419 (671)
..|.++||+||++|+++... ||+.. +.......+++||||+|+|+++++.+ .++++||||........ .
T Consensus 87 ~~v~~~t~~eL~~l~~~~~~~~~~~~~~----~~~~~~~~g~~iptL~evl~~~~~~~~~~~~l~IEiK~~~~~~~~~~~ 162 (313)
T 3l12_A 87 RQVAEMTYAEIRALDVGGLDGRTVYGRR----FPDQAFLTGIHVPRLGELLDLCAGYGDQAPYLLLELKSDPALMHDHAA 162 (313)
T ss_dssp CBGGGSCHHHHHTSBCSSCCTTSHHHHH----STTSCCCSSCCCCBHHHHHHHHHTTGGGCCEEEEEECCCGGGTTCHHH
T ss_pred cchhcCcHHHHhhCCCCCcccccccccc----CccccccCCCcCCCHHHHHHHHHhcCCCCceEEEEEccCCcccccccc
Confidence 38999999999999987311 11100 00000113589999999999998731 36899999986532100 0
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCCh---hHH----------HHHH
Q 005894 420 GLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPR---EVV----------EEIK 485 (671)
Q Consensus 420 ~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~---~~l----------~~i~ 485 (671)
...++++|+++|+++++. ++++|+||+++.|++++++ |++++++++......... ... ..+.
T Consensus 163 ~~~~~~~v~~~l~~~~~~----~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 238 (313)
T 3l12_A 163 RAEMVAAVLADVRRYRME----PRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLP 238 (313)
T ss_dssp HHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC-------------CCCTTTCCSCHH
T ss_pred HHHHHHHHHHHHHHcCCC----CCEEEEcCCHHHHHHHHHHCCCCcEEEEeccccccccccccccccccccchhccccHH
Confidence 025789999999999988 7999999999999999998 999999998653210000 000 0012
Q ss_pred HHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChh
Q 005894 486 KYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPA 565 (671)
Q Consensus 486 ~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~ 565 (671)
..+..+++ ..+++.+ ...++++|+.+|++|++|++||+|++. ++++++ ++||||||||+|+
T Consensus 239 ~~~~~~~~--~~~~~~~---~~~~~~~v~~~~~~Gl~V~~WTVn~~~-------------~~~~l~-~~GVDgIiTD~P~ 299 (313)
T 3l12_A 239 QAVASAGG--QLWCPYF---LDVTPELVAEAHDLGLIVLTWTVNEPE-------------DIRRMA-TTGVDGIVTDYPG 299 (313)
T ss_dssp HHHHHHTC--SEEEEBG---GGCCHHHHHHHHHTTCEEEEBCCCSHH-------------HHHHHH-HHTCSEEEESCHH
T ss_pred HHHHHhCC--cEEecch---hcCCHHHHHHHHHCCCEEEEEcCCCHH-------------HHHHHH-HcCCCEEEeCCHH
Confidence 23344443 3455543 455789999999999999999999997 899885 9999999999999
Q ss_pred hHHHHHHhcCC
Q 005894 566 TASKYFRSKCS 576 (671)
Q Consensus 566 ~~~~~~~~~~~ 576 (671)
.+.+++++++.
T Consensus 300 ~~~~~l~~~g~ 310 (313)
T 3l12_A 300 RTQRILIDMGL 310 (313)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhcCc
Confidence 99999987765
No 9
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=100.00 E-value=4.2e-47 Score=389.12 Aligned_cols=236 Identities=15% Similarity=0.099 Sum_probs=199.5
Q ss_pred CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF 348 (671)
Q Consensus 269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~ 348 (671)
+|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+ ++| .
T Consensus 1 m~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~Rtt~-----------------~~g-~ 62 (248)
T 1zcc_A 1 MTKIVSHRGANRFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTN-----------------GTG-P 62 (248)
T ss_dssp CCEEEETTTTTTTSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSS-----------------CCS-B
T ss_pred CCeEEECCCCCCCCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCccccccC-----------------CCc-c
Confidence 4789999999999999999999999999999999999999999999999999999999 778 7
Q ss_pred cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894 349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT 428 (671)
Q Consensus 349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~ 428 (671)
|.++||+||++|+++ +.++||||+|+|+++++.+ +.++||||...... ..++++++
T Consensus 63 v~~~t~~eL~~l~~g-------------------~~~~iptL~evl~~~~~~~-~~l~iEiK~~~~~~----~~~~~~v~ 118 (248)
T 1zcc_A 63 VGHMLSSEIDTLDAG-------------------GWFDDRFKGAIVPRLDAYL-EHLRGRAGVYIELK----YCDPAKVA 118 (248)
T ss_dssp STTSCHHHHTTSCSS-------------------TTTCGGGTTCCCCBHHHHH-HHHTTTCEEEEEEE----ESCHHHHH
T ss_pred hhhCCHHHHHhCCCC-------------------CCCCCCCHHHHHHHHHhcC-cEEEEEeCCCCCcc----cHHHHHHH
Confidence 999999999999986 2358999999999998732 57899999764210 12678999
Q ss_pred HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894 429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT 507 (671)
Q Consensus 429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~ 507 (671)
++++++++. ++++|+||+++.|++++++ |++++++++..... ...++...++ ..+++.. ..
T Consensus 119 ~~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~---------~~~~~~~~~~--~~i~~~~---~~ 180 (248)
T 1zcc_A 119 ALVRHLGMV----RDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKS---------PSLVGAVHHA--SIIEITP---AQ 180 (248)
T ss_dssp HHHHHHTCS----TTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSS---------THHHHHTTCC--SEEEECH---HH
T ss_pred HHHHHhCCC----CCEEEEECCHHHHHHHHHHCCCCcEEEEecCCcc---------HHHHHHHcCC--CEEEecH---HH
Confidence 999999987 7999999999999999998 99999998754311 1234444444 3454432 33
Q ss_pred c-chHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHH-HHhhcCccEEEECChhhHHHHHHhcCCCC
Q 005894 508 N-ATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVAT-FAQGVGVDGITTEFPATASKYFRSKCSDD 578 (671)
Q Consensus 508 ~-~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~-~l~~~GVDgIiTD~P~~~~~~~~~~~~~~ 578 (671)
. ++++|+.+|++|+.|++||+|++. ++.+ + .++||||||||+|..+.+++++.|...
T Consensus 181 ~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~~l-~~~GvdgIiTD~p~~~~~~~~~~~~~~ 239 (248)
T 1zcc_A 181 MRRPGIIEASRKAGLEIMVYYGGDDM-------------AVHREI-ATSDVDYINLDRPDLFAAVRSGMAELL 239 (248)
T ss_dssp HHSHHHHHHHHHHTCEEEEECCCCCH-------------HHHHHH-HHSSCSEEEESCHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-HHcCCCEEEECCHHHHHHHHHHhcchh
Confidence 4 678999999999999999999997 8998 6 599999999999999999998877543
No 10
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=2.6e-45 Score=381.01 Aligned_cols=254 Identities=16% Similarity=0.169 Sum_probs=196.1
Q ss_pred CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccc----cCcccccccccccccccccc
Q 005894 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGK----TTAATVFMSKATSVPEIQKE 344 (671)
Q Consensus 269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rt----T~~~~~f~~r~~~~~~~~~~ 344 (671)
+++||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+ |+....++ ..+
T Consensus 8 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~~~~---------~~~ 78 (272)
T 3ch0_A 8 SFDIQGHRGCRGLLPENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVTE---------ANE 78 (272)
T ss_dssp TCEEEETTTTTTTSSTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBCCTTTCCEETTEECCT---------TTG
T ss_pred cccEEecCCCCCCCCcccHHHHHHHHHcCCCEEEEeeeEcCCCcEEEeCCCcccccccccCCCccccc---------ccc
Confidence 57899999999999999999999999999999999999999999999999999994 33110000 012
Q ss_pred cccccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccC-cccEEEEecCchhhhhh---cC
Q 005894 345 RGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKA-VSGVLININNAAYLASK---KG 420 (671)
Q Consensus 345 ~G~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~-~~~i~IeIK~~~~~~~~---~~ 420 (671)
.++.|.++||+||++|+++ .||+.. ++.... ..++||||+|+|+++++.+ .++++||||........ ..
T Consensus 79 ~~~~v~d~t~~eL~~l~~~--~~~~~~----~~~~~~-~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~ 151 (272)
T 3ch0_A 79 KNFNLYAMNYADIKEIDVG--MKTHPR----FKSQKK-VPAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGDNIDHPNI 151 (272)
T ss_dssp GGSBGGGSCHHHHTTSCCS--SSCCTT----CTTSCC-CCCCCCBHHHHHHHHHHHCSSCEEEEEECCCGGGBTTTBCCH
T ss_pred cCceeecCCHHHHHhcCCC--CccCcc----Cccccc-CCCCCcCHHHHHHHHHHhCCCceEEEEECCCcCcccccCccH
Confidence 3448999999999999987 455421 111110 1248999999999998631 25899999986532100 01
Q ss_pred CcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeee
Q 005894 421 LGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVI 499 (671)
Q Consensus 421 ~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~ 499 (671)
..++++++++++++++. ++++|+||+++.|++++++ |++++++++... . .+..++..++.....++
T Consensus 152 ~~~~~~v~~~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~-~--------~~~~~~~~~~~~~~~i~ 218 (272)
T 3ch0_A 152 ALFCDLVVAEIKKAHIT----DRFTLQSFDVRALEYMHSQYPDIKLSYLVETK-G--------TLKKQLEKLSFTPAVYS 218 (272)
T ss_dssp HHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSEEEEEECSS-C--------CHHHHHTTSSSCCSEEE
T ss_pred HHHHHHHHHHHHHcCCC----CcEEEEeCCHHHHHHHHHHCCCCcEEEEecCC-C--------CHHHHHHHcCCCCcEEc
Confidence 14789999999999987 7999999999999999998 999999998643 1 12234444544224555
Q ss_pred cCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHH
Q 005894 500 STTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATAS 568 (671)
Q Consensus 500 ~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~ 568 (671)
+.. ...++++|+.+|++|+.|++||+|++. ++.+++ ++||||||||+|+.+.
T Consensus 219 ~~~---~~~~~~~v~~~~~~Gl~v~~wTvn~~~-------------~~~~l~-~~GvdgIiTD~P~~~~ 270 (272)
T 3ch0_A 219 PDV---TLVSKKDIDAAHKLGMRVIPWTVNTKE-------------EIETLI-SLGVDGIITDYPDLFF 270 (272)
T ss_dssp EBG---GGCCHHHHHHHHHTTCEECCBCCCSHH-------------HHHHHH-HHTCSEEEESCGGGGT
T ss_pred cch---hhcCHHHHHHHHHcCCEEEEeccCCHH-------------HHHHHH-HcCCCEEEeCCHHHHh
Confidence 543 344689999999999999999999987 888884 9999999999999864
No 11
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=100.00 E-value=5.8e-45 Score=370.83 Aligned_cols=230 Identities=15% Similarity=0.180 Sum_probs=190.7
Q ss_pred CceEEeccCC--CCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccc
Q 005894 269 RPLIITHNGA--SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERG 346 (671)
Q Consensus 269 ~p~iIAHRG~--s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G 346 (671)
+|+||||||+ ++.+||||++||++|++.|||+||||||+||||++||+||.+|+| +
T Consensus 4 ~~~iiaHRG~~~~~~~pENTl~Af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~--~-------------------- 61 (238)
T 3no3_A 4 NTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG--K-------------------- 61 (238)
T ss_dssp CCEEEETTSSCSSTTCCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEETT--E--------------------
T ss_pred CCeEEeCCCCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCCCC--C--------------------
Confidence 6899999999 689999999999999999999999999999999999999999965 2
Q ss_pred cccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHH
Q 005894 347 IFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDA 426 (671)
Q Consensus 347 ~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~ 426 (671)
.|.++||+||++|+.+ ++++||||+|+|+++++.+.+.++||||...... .+..++++
T Consensus 62 -~v~~~t~~el~~l~~~-------------------~~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~--~~~~~~~~ 119 (238)
T 3no3_A 62 -HIQSCTYDELKDLQLS-------------------NGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPE--RNRDAARL 119 (238)
T ss_dssp -EGGGSCHHHHTTCBCT-------------------TSCBCCBHHHHHHHHHHCTTCEEEEEECCCSSHH--HHHHHHHH
T ss_pred -ChHhCCHHHHhhCCCC-------------------CCCcCCcHHHHHHHHhhcCCceEEEEeCCCCCcc--hhHHHHHH
Confidence 7999999999999875 3579999999999998753368999999764311 12257889
Q ss_pred HHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcc
Q 005894 427 VTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESF 505 (671)
Q Consensus 427 v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~ 505 (671)
++++++++++. ++++++||+++.|++++++ |+++++++.... .. . .+...+. ..+.+.. ..
T Consensus 120 v~~~l~~~~~~----~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~----~~---~----~~~~~~~--~~~~~~~-~~ 181 (238)
T 3no3_A 120 SVQMVKRMKLA----KRTDYISFNMDACKEFIRLCPKSEVSYLNGEL----SP---M----ELKELGF--TGLDYHY-KV 181 (238)
T ss_dssp HHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSCEEECSSCS----CH---H----HHHHTTC--CEEEEEH-HH
T ss_pred HHHHHHHcCCc----CCEEEEECCHHHHHHHHHHCCCCeEEEEeCCC----CH---H----HHHHCCC--ceEeccH-Hh
Confidence 99999999987 7999999999999999999 999999986432 11 1 1223333 2233321 11
Q ss_pred cccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhc
Q 005894 506 TTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSK 574 (671)
Q Consensus 506 ~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~ 574 (671)
...++++|+++|++|+.|++||+|++. ++++++ ++||||||||+|+.+.++++++
T Consensus 182 ~~~~~~~v~~~~~~G~~v~~WTVn~~~-------------~~~~l~-~~GVdgIiTD~P~~~~~~l~~r 236 (238)
T 3no3_A 182 LQSHPDWVKDCKVLGMTSNVWTVDDPK-------------LMEEMI-DMGVDFITTDLPEETQKILHSR 236 (238)
T ss_dssp HHHSTTHHHHHHHTTCEEEEECCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-HcCCCEEECCCHHHHHHHHHhc
Confidence 223568999999999999999999997 899885 9999999999999999998765
No 12
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=100.00 E-value=6.4e-44 Score=373.02 Aligned_cols=244 Identities=17% Similarity=0.271 Sum_probs=195.3
Q ss_pred CceEEeccCCCC-CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccc
Q 005894 269 RPLIITHNGASG-VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGI 347 (671)
Q Consensus 269 ~p~iIAHRG~s~-~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~ 347 (671)
+|+||||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|+ ++|
T Consensus 31 ~~~iiaHRG~~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~Vv~HD~~l~rtt~-----------------~~g- 92 (292)
T 3mz2_A 31 IPLISGHRGGRGKGYPENSMETFENTLSYTPATFEIDPRLTKDSVIVLFHDDTLERTSN-----------------GTG- 92 (292)
T ss_dssp CCEEEEGGGCCBTTBCTTCHHHHHHHHHHCCCEEEECEEECTTCCEEECCSSSSTTTBS-----------------CCS-
T ss_pred CCEEEECCCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeECCCCcEEEECCchhcccCC-----------------CCC-
Confidence 789999999986 7999999999999999999999999999999999999999999999 778
Q ss_pred ccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHH
Q 005894 348 FSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAV 427 (671)
Q Consensus 348 ~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v 427 (671)
.|.++||+||++|+++. +++ .+ .+++||||+|+|++++++ +.++||+|... .+.|
T Consensus 93 ~v~~~t~~el~~l~~~~--~~~----------~~-~~~~iptL~evl~~~~~~--~~l~iE~K~~~----------~~~v 147 (292)
T 3mz2_A 93 KVSDYTWEELQNFRLKD--PEG----------NI-TNYRIPTLEEAIRWARGK--TILILDKKDVP----------MERT 147 (292)
T ss_dssp CGGGSCHHHHTTSCBBC--TTC----------CB-CSCCCCBHHHHHHHHTTT--CCEEECCSSSC----------HHHH
T ss_pred chhhCcHHHHhcCCCCC--CCC----------cc-CCcCCCCHHHHHHHhCCC--cEEEEEECCCc----------HHHH
Confidence 89999999999999872 222 12 357999999999999875 57999998642 3788
Q ss_pred HHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCc----eeeecCC
Q 005894 428 TKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTR----TSVISTT 502 (671)
Q Consensus 428 ~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~----~~v~~~~ 502 (671)
+++++++++. ++++++||+.+.|+++++. |++++++++.. ...+ ..+. ..+.+. ..+.+.
T Consensus 148 ~~~l~~~~~~----~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~------~~~l---~~~~-~~g~~~~~~~~~~~~~- 212 (292)
T 3mz2_A 148 AQLITDMQAE----PYVMITVHDGASARFFYEKNPNFMFEAFVKT------KEAV---QDYE-DNGIPWSHIMAYVGPK- 212 (292)
T ss_dssp HHHHHHTTCT----TTEEEEESSHHHHHHHHHHCTTCCEEEECCS------HHHH---HHHH-HTTCCGGGEEEEEESS-
T ss_pred HHHHHHcCCC----CCEEEEECCHHHHHHHHHHCCCCeEEEEeCC------HHHH---HHHH-HhCCChhheeeeeccc-
Confidence 9999999988 7999999999999999999 99999998742 2223 2222 222221 223332
Q ss_pred CcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhcCC
Q 005894 503 ESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCS 576 (671)
Q Consensus 503 ~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~~~ 576 (671)
+...++++|+.+|++|+.|++||+|+.+... . ..|+..+|.+++ ++||||||||+|+.+.+++++...
T Consensus 213 --~~~~~~~~V~~ah~~G~~V~vWTv~t~d~~~--~-~~~~~~~~~~L~-~~GVDgIiTD~P~~l~~~L~~~~~ 280 (292)
T 3mz2_A 213 --ITPEVREVIDMLHERGVMCMISTAPSDDKLS--T-PESRAEAYRMII-RQGVDIIESDRPIEVAEAISSLIP 280 (292)
T ss_dssp --CCHHHHHHHHHHHHTTBCEEEECTTTGGGSS--S-HHHHHHHHHHHH-HTTCCEEEESCHHHHHHHHGGGSC
T ss_pred --ccccCHHHHHHHHHCCCEEEEEeCCCcchhh--h-ccccHHHHHHHH-HcCCCEEEeCCHHHHHHHHHHhcc
Confidence 2345678999999999999999998864100 0 012234788885 999999999999999999986543
No 13
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=8.2e-44 Score=368.76 Aligned_cols=252 Identities=19% Similarity=0.233 Sum_probs=203.7
Q ss_pred CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF 348 (671)
Q Consensus 269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~ 348 (671)
+|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+ ++| .
T Consensus 17 ~~~iiaHRG~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~vv~HD~~l~r~t~-----------------~~g-~ 78 (278)
T 3i10_A 17 KVLVVAHRGNWRSAPENSTAAIDSAIAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTT-----------------GKG-E 78 (278)
T ss_dssp SCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBSTTTBS-----------------CCS-B
T ss_pred CCEEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCeEEEecCcchhhcCC-----------------CCc-e
Confidence 7899999999999999999999999999999999999999999999999999999999 778 8
Q ss_pred cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894 349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT 428 (671)
Q Consensus 349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~ 428 (671)
|.++||+||++|+++ .+++. + .+++||||+|+|++++++ +.++||.. ..++++|+
T Consensus 79 v~~~t~~el~~l~~~--~~~~~----------~-~~~~iptL~evl~~~~~~----~~~nie~~--------~~~~~~v~ 133 (278)
T 3i10_A 79 IKNWTLADIKKLKLK--DKDGK----------V-TNYVVPTLEEALLTAKGK----IMVNLDKA--------YDIFDDVY 133 (278)
T ss_dssp GGGSCHHHHTTSCBB--CTTSC----------B-CSCCCCBHHHHHHHHTTT----SEEEEESC--------GGGHHHHH
T ss_pred eecCcHHHHhcCCCC--CCCcc----------c-CCCCCCCHHHHHHHhcCC----eEEEEecC--------chHHHHHH
Confidence 999999999999987 34431 1 368999999999999874 44444432 14789999
Q ss_pred HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCC-ceeeecCCCccc
Q 005894 429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVT-RTSVISTTESFT 506 (671)
Q Consensus 429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~-~~~v~~~~~~~~ 506 (671)
++++++++. ++|+++| ...++.+++. |++++++++...+....+...+.+.+|+..+.+. ...+++.. .
T Consensus 134 ~~l~~~~~~----~~v~i~s--~~~l~~~~~~~p~~~~~~l~~p~i~~~~~~~~~~i~~~~~~~~p~~~~~~~~~~---~ 204 (278)
T 3i10_A 134 AILEKTETQ----NQVIMKG--GQPIETVKREFGSYLDKVLYMPVIDLGNKEAEKIITDYLKELRPAAFEIIYSDP---K 204 (278)
T ss_dssp HHHHHHTCG----GGEEEEE--SSCHHHHHHHHGGGTTTSEEEEEEETTSTTHHHHHHHHHHHTCCSEEEEEBCCT---T
T ss_pred HHHHHcCCC----CeEEEEE--hHHHHHHHHHCcCCccceEEEeeecccccchHHHHHHHHHhcCceEEEEeecCC---c
Confidence 999999998 7999999 3468888888 8887766665443333344566788888877765 23334332 3
Q ss_pred ccchHHHHHHHHcCCeEEEEeccCcccccccccCC-----ChHHHHHHHHhhc-CccEEEECChhhHHHHHHhcCC
Q 005894 507 TNATNILRDLHSANISVYISALRNEYLSIAFDYLA-----DPLIEVATFAQGV-GVDGITTEFPATASKYFRSKCS 576 (671)
Q Consensus 507 ~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~-----D~~~e~~~~l~~~-GVDgIiTD~P~~~~~~~~~~~~ 576 (671)
...+++++.+|++|++|++||+.++ ++.+|.+ ||..+|.+++ ++ |||+|+||+|+.+.+|++++..
T Consensus 205 ~~~~~~v~~~~~~g~~v~~nTlw~~---~~~g~~d~~a~~d~~~~~~~l~-~~~Gvd~I~TD~P~~l~~yL~~~~~ 276 (278)
T 3i10_A 205 NPLPPKIKQLLFKKSLIWYNTLWGS---LAGNHDDNLALTDPEKSYGYLI-EQLGARILQTDQPAYLLDYLRKKGW 276 (278)
T ss_dssp CSSHHHHHHHHTTTSEEEEECSSGG---GBTTCCHHHHHHCHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTS
T ss_pred cchHHHHHHHHHCCCEEEEEecccc---cccCccchhhccChHHHHHHHH-hcCCCCEEEeCCHHHHHHHHhhccc
Confidence 3347899999999999999998655 2455543 7777899985 88 9999999999999999987643
No 14
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=100.00 E-value=8.4e-44 Score=361.36 Aligned_cols=218 Identities=21% Similarity=0.237 Sum_probs=179.2
Q ss_pred CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF 348 (671)
Q Consensus 269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~ 348 (671)
...||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+ ++| .
T Consensus 12 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~-----------------~~g-~ 73 (234)
T 1o1z_A 12 HVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFG-----------------LDV-K 73 (234)
T ss_dssp CCEEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHC-----------------EEE-E
T ss_pred eEEEEEcCCCCCCCCCchHHHHHHHHHcCCCEEEEEeeEecCCCEEEEcCCcHHhcCC-----------------cCc-C
Confidence 5689999999999999999999999999999999999999999999999999999999 778 8
Q ss_pred cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894 349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT 428 (671)
Q Consensus 349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~ 428 (671)
|.++||+||++|+ + ++||||+|+|++++++ ++++||||.+ .++++++
T Consensus 74 v~d~T~~eL~~l~-~---------------------~~iptL~evL~~~~~~--~~l~iEiK~~---------~~~~~v~ 120 (234)
T 1o1z_A 74 IRDATVSELKELT-D---------------------GKITTLKEVFENVSDD--KIINIEIKER---------EAADAVL 120 (234)
T ss_dssp GGGSCHHHHHHHT-T---------------------TCCCBHHHHHHHSCTT--SEEEEEECCG---------GGHHHHH
T ss_pred cccCcHHHHhcCC-C---------------------CCCCCHHHHHHhcccC--CeEEEEeCCc---------cHHHHHH
Confidence 9999999999997 2 5799999999999885 6899999964 3568889
Q ss_pred HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcC-CceeeecCCCccc
Q 005894 429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTV-TRTSVISTTESFT 506 (671)
Q Consensus 429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~-~~~~v~~~~~~~~ 506 (671)
+++++ . ++++++||+ |+++++. |++++++++..... . .+ ..++..++. ....+.+... ++
T Consensus 121 ~~l~~---~----~~vii~Sf~---l~~~~~~~p~~~~~~l~~~~~~--~--~~---~~~~~~~~~~~~~~i~~~~~-~~ 182 (234)
T 1o1z_A 121 EISKK---R----KNLIFSSFD---LDLLDEKFKGTKYGYLIDEENY--G--SI---ENFVERVEKERPYSLHVPYQ-AF 182 (234)
T ss_dssp HHHTT---C----CSEEEEESC---HHHHHHHCTTSCEEEECCTTTT--C--SH---HHHHHHHHHHCCSEEEEEGG-GG
T ss_pred HHHhc---c----CCEEEEchh---HHHHHhhCCCCcEEEEeccccc--c--CH---HHHHHHcCCCCCCEEEeCHH-Hh
Confidence 99887 3 699999999 8999988 99999999865211 0 11 112222221 0123444321 11
Q ss_pred ccc--hHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHH
Q 005894 507 TNA--TNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKY 570 (671)
Q Consensus 507 ~~~--~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~ 570 (671)
..+ +++++.+|++|+.|++||+|++. ++.+++ ++ |||||||+|+.+.+|
T Consensus 183 g~~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~-vdgIiTD~P~~~~~~ 233 (234)
T 1o1z_A 183 ELEYAVEVLRSFRKKGIVIFVWTLNDPE-------------IYRKIR-RE-IDGVITDEVELFVKL 233 (234)
T ss_dssp GSHHHHHHHHHHHHTTCEEEEESCCCHH-------------HHHHHG-GG-CSEEEESCHHHHHHT
T ss_pred cCCccHHHHHHHHHcCCEEEEeCCCCHH-------------HHHHHH-Hh-CCEEEcCCHHHHhhc
Confidence 114 78999999999999999999987 898885 89 999999999998876
No 15
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=100.00 E-value=2.5e-43 Score=355.70 Aligned_cols=215 Identities=16% Similarity=0.225 Sum_probs=178.8
Q ss_pred CCceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccc
Q 005894 268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGI 347 (671)
Q Consensus 268 ~~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~ 347 (671)
.+|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+ + |
T Consensus 6 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lT~Dg~lVv~HD~~l~--~--------------------g- 62 (224)
T 1vd6_A 6 QRPLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTP--L--------------------G- 62 (224)
T ss_dssp -CCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEET--T--------------------E-
T ss_pred CCceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEecCCcEEEECCCccC--C--------------------C-
Confidence 3689999999999999999999999999999999999999999999999999986 2 3
Q ss_pred ccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHh-ccCcccEEEEecCchhhhhhcCCcHHHH
Q 005894 348 FSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAK-TKAVSGVLININNAAYLASKKGLGVVDA 426 (671)
Q Consensus 348 ~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~-~~~~~~i~IeIK~~~~~~~~~~~~~~~~ 426 (671)
.|.++||+||++|+ ++||||+|+|++++ +. .+.++||||...... ..++++
T Consensus 63 ~v~~~t~~eL~~l~-----------------------~~iptL~evl~~~~~~~-~~~l~iEiK~~~~~~----~~~~~~ 114 (224)
T 1vd6_A 63 PVFQVDYADLKAQE-----------------------PDLPRLEEVLALKEAFP-QAVFNVELKSFPGLG----EEAARR 114 (224)
T ss_dssp EGGGSCHHHHHHHS-----------------------TTCCBHHHHHGGGGTCT-TCEEEEEECCCTTSH----HHHHHH
T ss_pred ChhhCCHHHHHhcC-----------------------CCCCCHHHHHHhhhccC-CceEEEEECCCCCcc----HHHHHH
Confidence 69999999999986 36999999999998 33 258999999764321 136788
Q ss_pred HHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcc
Q 005894 427 VTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESF 505 (671)
Q Consensus 427 v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~ 505 (671)
+++++++ . ++++++||+++.|+.+++. |++++++++.... ..++...++ ..+++..
T Consensus 115 v~~~l~~---~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~-----------~~~~~~~~~--~~i~~~~--- 171 (224)
T 1vd6_A 115 LAALLRG---R----EGVWVSSFDPLALLALRKAAPGLPLGFLMAEDH-----------SALLPCLGV--EAVHPHH--- 171 (224)
T ss_dssp HHHHTTT---C----SSEEEEESCHHHHHHHHHHCTTSCEEEEESSCC-----------GGGGGGSCC--SEEEEBG---
T ss_pred HHHHHhc---C----CcEEEEeCCHHHHHHHHHHCCCCCEEEEecccc-----------HHHHHHcCC--cEEecCc---
Confidence 8888877 3 6999999999999999998 9999999985431 122333333 3455543
Q ss_pred cccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHH
Q 005894 506 TTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKY 570 (671)
Q Consensus 506 ~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~ 570 (671)
...++++|+.+|++|+.|++||+|++. ++.+++ ++||||||||+|..+.++
T Consensus 172 ~~~~~~~v~~~~~~G~~v~~wtvn~~~-------------~~~~l~-~~GvdgI~TD~p~~~~~~ 222 (224)
T 1vd6_A 172 ALVTEEAVAGWRKRGLFVVAWTVNEEG-------------EARRLL-ALGLDGLIGDRPEVLLPL 222 (224)
T ss_dssp GGCCHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HTTCSEEEESCHHHHTTS
T ss_pred ccCCHHHHHHHHHCCCEEEEEeCCCHH-------------HHHHHH-hcCCCEEEcCCHHHHHHh
Confidence 344689999999999999999999987 898884 999999999999988654
No 16
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=100.00 E-value=1e-34 Score=303.22 Aligned_cols=232 Identities=12% Similarity=0.109 Sum_probs=168.5
Q ss_pred Cc-eEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCC---cccccCcccccccccccccccccc
Q 005894 269 RP-LIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPD---LIGKTTAATVFMSKATSVPEIQKE 344 (671)
Q Consensus 269 ~p-~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~---L~rtT~~~~~f~~r~~~~~~~~~~ 344 (671)
+| +||||| |||++||++|++.|||+||+|||+ |||++||+||.+ |+|+|+ +
T Consensus 5 ~p~~iiaHr-------ENTl~Af~~A~~~Gad~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~-----------------~ 59 (285)
T 1xx1_A 5 RPIWNLAHM-------VNAVAQIPDFLDLGANALEADVTF-KGSVPTYTYHGTPCDFGRDCI-----------------R 59 (285)
T ss_dssp EEEEEEESC-------CCSTTHHHHHHHHTCSEEEEEEEE-ETTEEEEEECCSSCCTTSCSC-----------------C
T ss_pred CCcEEEEeh-------hccHHHHHHHHHhCCCEEEEEEEE-ECCEEEEEcCCcccccccccC-----------------C
Confidence 56 899999 999999999999999999999999 999999999999 999999 7
Q ss_pred cccccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhh---cCC
Q 005894 345 RGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASK---KGL 421 (671)
Q Consensus 345 ~G~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~---~~~ 421 (671)
+| .|.++ |+||++|+.. ++ +.+ ++.| .+++||||........ .+.
T Consensus 60 ~g-~v~d~-l~eL~~l~~~----~~---------~~~---------~~~L--------~~l~iEiK~~~~~~~~~~~~~~ 107 (285)
T 1xx1_A 60 WE-YFNVF-LKTLREYTTP----GN---------AKY---------RDGF--------ILFVLDLKTGSLSNDQVRPAGE 107 (285)
T ss_dssp EE-EHHHH-HHHHHHHTST----TC---------TTC---------CTTC--------CEEEEEECCTTCCHHHHHHHHH
T ss_pred Cc-cHHHH-HHHHHHcccC----CC---------Ccc---------cccc--------cEEEEecCCCcccccccchhhh
Confidence 78 79999 9999999872 21 122 2212 1599999976432110 000
Q ss_pred cHHHHHHHHHHhcCCCCCCCce----EEEEcCChHHHHH-HhcC--------CCceEEEEeecccCCCChhHHHHHHHHH
Q 005894 422 GVVDAVTKALSNATFDKQSTQQ----VMIQSDDSSVLSK-FQDV--------PAYKKVLHIRKEVSAAPREVVEEIKKYA 488 (671)
Q Consensus 422 ~~~~~v~~~l~~~~~~~~~~~~----vii~Sfd~~~L~~-lk~~--------p~~~~~~l~~~~~~d~~~~~l~~i~~~a 488 (671)
.+++ .++++++.......+ |+|+||++..|.+ +++. |.+++++++..... .+...+..+..++
T Consensus 108 ~~~~---~ll~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~~~~~~~~p~~~~~~l~~~~~~-~~~~~~~~~~~~~ 183 (285)
T 1xx1_A 108 NVAK---ELLQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHEDLLEKVGYDFSGPYL-PSLPTLDATHEAY 183 (285)
T ss_dssp HHHH---HHHHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHHHHHTTCGGGGGGEEEEECCCCS-SSCCCHHHHHHHH
T ss_pred hHHH---HHHHHHhhccccccccceeEEEEeCCHHHHHHHHHHHhhhccccCcccceEEecccccc-cchhhHHHHHHHH
Confidence 0222 266777653111135 9999999999999 8874 88999998754310 0111234455666
Q ss_pred HHhcCCceeeecCC--------CcccccchHHHHHHHHcCC--eEEEEeccCcccccccccCCChHHHHHHHHhhcCccE
Q 005894 489 SAVTVTRTSVISTT--------ESFTTNATNILRDLHSANI--SVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDG 558 (671)
Q Consensus 489 ~~v~~~~~~v~~~~--------~~~~~~~~~~V~~~~~~Gl--~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDg 558 (671)
..+++.. .++... ..+...++.+++++|++|+ +|++||+|++. ++++++ ++||||
T Consensus 184 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Glg~~V~~WTvn~~~-------------~~~~l~-~~GVDg 248 (285)
T 1xx1_A 184 KKAGVDG-HIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYWSVDKVS-------------TTKAAL-DVGVDG 248 (285)
T ss_dssp HHHTCCS-CBEEEECSCCSSHHHHHHHHHHHHHHHTSTTCCCCEEEEECCCSHH-------------HHHHHH-HHTCSE
T ss_pred HHhCCCC-ccccccccccccccccHHHHhHHHHHHHHhcCCCCeEEEeeCCCHH-------------HHHHHH-hcCCCE
Confidence 6666533 221100 0012345678999999999 99999999998 899985 999999
Q ss_pred EEECChhhHHHHHHhcCC
Q 005894 559 ITTEFPATASKYFRSKCS 576 (671)
Q Consensus 559 IiTD~P~~~~~~~~~~~~ 576 (671)
||||+|+.+.+++++...
T Consensus 249 IiTD~P~~~~~~l~~~~~ 266 (285)
T 1xx1_A 249 IMTNYPNVLIGVLKESGY 266 (285)
T ss_dssp EEESCHHHHHHHHHSTTT
T ss_pred EEeCCHHHHHHHHhhhcc
Confidence 999999999999986543
No 17
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=99.97 E-value=4.5e-31 Score=284.14 Aligned_cols=248 Identities=20% Similarity=0.267 Sum_probs=179.2
Q ss_pred cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC--
Q 005894 4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR-- 81 (671)
Q Consensus 4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r-- 81 (671)
+...+..+||||||+||||++||+||.+|+||||+...||+|+++ +| +|+ |.|+|++||++++++ .||+.
T Consensus 54 A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~f~~~~~~---~g---~~~-v~d~T~~eL~~l~~~-~~~~~~~ 125 (356)
T 1ydy_A 54 AYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARK---DG---RYY-AIDFTLDEIKSLKFT-EGFDIEN 125 (356)
T ss_dssp HHHTTCSEEEEEEEECTTSCEEECSSSBCTTTBSHHHHSTTCCCT---TS---CCB-GGGSCHHHHHHSCBC-SCEEEET
T ss_pred HHHcCCCEEEeeeEECCCCcEEEeCCChHHhhcCccccccccccc---CC---Ccc-hhhCcHHHHHhCCCC-ccccccc
Confidence 345677799999999999999999999999999999999998863 33 355 999999999999998 45431
Q ss_pred -------CccCC---CCCCCCChhhhhHHHHH-------h------cC---------ccHHHHHHHHHHHcCC----ceE
Q 005894 82 -------SEAFD---NTQPIPTPDTIYDLFYS-------Q------HN---------ISAAKYITEYLQKLIS----NVY 125 (671)
Q Consensus 82 -------~~~f~---~~~~IptL~ev~~~~~~-------~------~~---------~~~~~~v~~~l~~~~~----~~~ 125 (671)
+.+|. .+++||||+|+++.+.. . .+ ..+++.+++++++++. +++
T Consensus 126 g~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~v 205 (356)
T 1ydy_A 126 GKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKV 205 (356)
T ss_dssp TEEEESSTTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHHHHHTTCCHHHHHHHHHHHTTCCSTTSSB
T ss_pred cccccccccccccccCCCcCCCHHHHHHHHHHhhhcccCCceEEEeecCcccccccchhHHHHHHHHHHHcCCCCCCCCE
Confidence 23342 47899999999765532 1 12 2478899999999983 689
Q ss_pred EEeCCChHHHHHhhhhc----CCCCcceEEEecCCCCcC--------CCCCCCHHHHh--hcHHHHHHhhceecCCCcce
Q 005894 126 YISSPEIGFLKTMDRKV----DHNTTKLVFMVLEPNAVE--------PTTNQTYGSIL--KNLTAIKSFASGIVVPKSYI 191 (671)
Q Consensus 126 ~isSf~~~~L~~i~~~~----~~~~~~~v~~~~~~~~~~--------~~~~~~y~~~~--~~l~~i~~~a~~i~~~~~~i 191 (671)
+|+||++..|+++++.. .| ..++++++....... +..+..|..+. ..+..+..+++++++.+..+
T Consensus 206 ~i~SF~~~~l~~~~~~~~p~~~p-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~p~~~~~ 284 (356)
T 1ydy_A 206 YLQCFDADELKRIKNELEPKMGM-ELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHML 284 (356)
T ss_dssp EEEESCHHHHHHHHHTHHHHHTC-CCEEEEEECCGGGCCCEEECTTSCEEECCCGGGGSTTHHHHHTTTCSEEEEBGGGT
T ss_pred EEEcCCHHHHHHHHhhcccccCC-CceEEEEeccCcccccccccccccccccchhhhcchhhHHHHHhhCeEEccCHHHh
Confidence 99999999999999642 45 478887543211000 00111333332 24666777889999887766
Q ss_pred eecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHH-HhhcCceeeeeEeecCCCccccc
Q 005894 192 IPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLT-FIDNSQFAVDGFITDFPTTATEA 266 (671)
Q Consensus 192 ~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~-~i~~g~~~Vdgv~td~p~~~~~~ 266 (671)
.+... ++.....+++|+.||++|++|++||||++.. + .|..||...+++ +++.| ||||+||+|.....+
T Consensus 285 ~~~~~-~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~l-~-~~~~d~~~~~~~~l~~~G---VDgIiTD~P~~~~~~ 354 (356)
T 1ydy_A 285 IEETS-QPGNIKLTGMVQDAQQNKLVVHPYTVRSDKL-P-EYTPDVNQLYDALYNKAG---VNGLFTDFPDKAVKF 354 (356)
T ss_dssp BCTTC-BTTBCCBCSHHHHHHHTTCEECCBCBCTTSC-C-TTCSSHHHHHHHHHTTSC---CSEEEESCHHHHHHH
T ss_pred ccccc-cccccCCHHHHHHHHHCCCEEEEEEECcccc-c-ccccCHHHHHHHHHHHcC---CCEEEeCCHHHHHHh
Confidence 43211 1111234689999999999999999999843 3 245677666575 56888 999999999876543
No 18
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=99.97 E-value=5.7e-31 Score=270.00 Aligned_cols=197 Identities=20% Similarity=0.191 Sum_probs=155.5
Q ss_pred ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCcc
Q 005894 5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEA 84 (671)
Q Consensus 5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~ 84 (671)
...+..+||||||+||||++||+||.+|+||||+ +|. |.|+|++||++++++ +||+ +.
T Consensus 36 ~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~------------------~g~-v~~~t~~eL~~l~~~-~~~~--~~ 93 (252)
T 2pz0_A 36 MELGADGIELDVQLTKDGHLVVIHDETVDRTTNG------------------EGF-VKDFTLEEIKKLDAG-IKFG--EK 93 (252)
T ss_dssp HHHTCSEEEEEEEECTTCCEEECSSSBSTTTSSC------------------CSB-GGGSCHHHHTTSCSS-TTTC--GG
T ss_pred HHcCCCEEEEEEEEecCCeEEEEcCCcccccCCC------------------Ccc-hhhCcHHHHhhcCCC-CCCC--CC
Confidence 3456779999999999999999999999999999 888 999999999999998 5665 56
Q ss_pred CCCCCCCCChhhhhHHHHH-h------cC------ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcceE
Q 005894 85 FDNTQPIPTPDTIYDLFYS-Q------HN------ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKLV 150 (671)
Q Consensus 85 f~~~~~IptL~ev~~~~~~-~------~~------~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~v 150 (671)
|. +++||||+|+++.+.. . .+ ..+++.+++++++++ .++++|+||++..|+.+++ ..| ..++.
T Consensus 94 ~~-~~~iPtL~evL~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~~~~vii~SF~~~~l~~~~~-~~p-~~~~~ 170 (252)
T 2pz0_A 94 FA-GERIPTLYEVFELIGDKDFLVNIEIKSGIVLYPGIEEKLIKAIKEYNFEERVIISSFNHYSLRDVKK-MAP-HLKIG 170 (252)
T ss_dssp GT-TCCCCBHHHHHHHHTTSCCEEEEEECCSSCCCTTHHHHHHHHHHHTTCTTTEEEEESBHHHHHHHHH-HCT-TSEEE
T ss_pred CC-CCcCCCHHHHHHHhhhcCCeEEEEeCCCCcccHHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHH-HCC-CCCEE
Confidence 66 8999999999776532 1 12 247899999999998 5789999999999999995 556 47887
Q ss_pred EEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCccc
Q 005894 151 FMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYS 229 (671)
Q Consensus 151 ~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~ 229 (671)
+.+.... ..+ ...++. .++++.+....+ ..++|+.+|++|++|++||||++..
T Consensus 171 ~l~~~~~-------~~~------~~~~~~~~~~~i~~~~~~~------------~~~~v~~~~~~G~~v~~wTvn~~~~- 224 (252)
T 2pz0_A 171 LLYQCGL-------VEP------WHMALRMEAYSLHPFYFNI------------IPELVEGCKKNGVKLFPWTVDRKED- 224 (252)
T ss_dssp EEECSBC-------SST------HHHHHHTTCSEEEEBGGGC------------CHHHHHHHHHTTCEECCBCCCSHHH-
T ss_pred EEecCcc-------ccH------HHHHHHcCCeEEecchhcC------------CHHHHHHHHHCCCEEEEECCCCHHH-
Confidence 6543210 011 112222 256666554443 2589999999999999999998754
Q ss_pred CCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccc
Q 005894 230 SYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA 266 (671)
Q Consensus 230 ~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~ 266 (671)
++++++.| ||||+||+|.....+
T Consensus 225 -----------~~~l~~~G---vdgIiTD~P~~~~~~ 247 (252)
T 2pz0_A 225 -----------MERMIKAG---VDGIITDDPETLINL 247 (252)
T ss_dssp -----------HHHHHHHT---CSEEEESCHHHHHHH
T ss_pred -----------HHHHHHcC---CCEEEcCCHHHHHHH
Confidence 88999999 999999999987653
No 19
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=99.96 E-value=6.6e-30 Score=261.31 Aligned_cols=199 Identities=16% Similarity=0.142 Sum_probs=155.2
Q ss_pred cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894 4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE 83 (671)
Q Consensus 4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~ 83 (671)
+...+..+||||||+||||++||+||.+|+||||+ +|. |.|+|++||++++++ +||+ +
T Consensus 30 A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~R~t~~------------------~g~-v~~~t~~eL~~l~~g-~~~~--~ 87 (247)
T 2otd_A 30 GAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSNG------------------WGV-AGELNWQDLLRVDAG-SWYS--K 87 (247)
T ss_dssp HHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSSC------------------CSB-GGGSCHHHHTTCCSS-TTTC--G
T ss_pred HHHcCCCEEEEEeeEccCCcEEEECCCCccccCCC------------------Ccc-HhhCcHHHHhhCCCC-CccC--C
Confidence 34567779999999999999999999999999999 888 999999999999998 6665 4
Q ss_pred cCCCCCCCCChhhhhHHHHH-hc------Cc------cHHHHHHHHHHHc--CCceEEEeCCChHHHHHhhhhcCCCCcc
Q 005894 84 AFDNTQPIPTPDTIYDLFYS-QH------NI------SAAKYITEYLQKL--ISNVYYISSPEIGFLKTMDRKVDHNTTK 148 (671)
Q Consensus 84 ~f~~~~~IptL~ev~~~~~~-~~------~~------~~~~~v~~~l~~~--~~~~~~isSf~~~~L~~i~~~~~~~~~~ 148 (671)
.|. +++||||+|+++.+.. .. +. .+++.++++++++ +..+++|+||++..|+.+++ ..| ..+
T Consensus 88 ~~~-~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~~~~~v~i~Sf~~~~l~~~~~-~~p-~~~ 164 (247)
T 2otd_A 88 AFK-GEPLPLLSQVAERCREHGMMANIEIKPTTGTGPLTGKMVALAARQLWAGMTPPLLSSFEIDALEAAQQ-AAP-ELP 164 (247)
T ss_dssp GGT-TCCCCBHHHHHHHHHHTTCEEEEEECCCTTCHHHHHHHHHHHHHHHTTTSCCCEEEESCHHHHHHHHH-HCT-TSC
T ss_pred CCC-CCcCCCHHHHHHHHHhcCCEEEEEECCCCCcchHHHHHHHHHHHHHhcCcCCEEEEcCCHHHHHHHHH-HCC-CCC
Confidence 566 8999999999776542 11 21 2567899999887 34489999999999999995 556 488
Q ss_pred eEEEecCCCCcCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCc
Q 005894 149 LVFMVLEPNAVEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDI 227 (671)
Q Consensus 149 ~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~ 227 (671)
+.+.+... ...+. ..++.. ++++.+....+ ..++|+.+|++|++|++||||++.
T Consensus 165 ~~~l~~~~-------~~~~~------~~~~~~~~~~i~~~~~~~------------~~~~v~~~~~~G~~v~~wTvn~~~ 219 (247)
T 2otd_A 165 RGLLLDEW-------RDDWR------ELTARLGCVSIHLNHKLL------------DKARVMQLKDAGLRILVYTVNKPQ 219 (247)
T ss_dssp EEEEESSC-------CTTHH------HHHHHHTCSEEEEEGGGC------------CHHHHHHHHHTTCEEEEECCCCHH
T ss_pred EEEEecCC-------cccHH------HHHHHcCCeEEecChHhC------------CHHHHHHHHHCCCEEEEEccCCHH
Confidence 87654321 11121 122222 56666654443 258999999999999999999874
Q ss_pred ccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894 228 YSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI 267 (671)
Q Consensus 228 ~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i 267 (671)
. ++++++.| ||||+||+|.....++
T Consensus 220 ~------------~~~l~~~G---vdgI~TD~p~~~~~~l 244 (247)
T 2otd_A 220 H------------AAELLRWG---VDCICTDAIDVIGPNF 244 (247)
T ss_dssp H------------HHHHHHHT---CSEEEESCTTTSCTTC
T ss_pred H------------HHHHHHcC---CCEEEeCCHHHHHHHH
Confidence 4 88999999 9999999999877654
No 20
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=99.96 E-value=8.3e-30 Score=261.33 Aligned_cols=199 Identities=18% Similarity=0.178 Sum_probs=154.3
Q ss_pred cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894 4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE 83 (671)
Q Consensus 4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~ 83 (671)
+...+..+||||||+||||++||+||.+|+||||+ +|. |.|+|++||++++++ +|++ +
T Consensus 33 A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~------------------~~~-v~~~t~~el~~l~~~-~~~~--~ 90 (252)
T 3qvq_A 33 AGQQGIKWVEIDVMLSGDGIPVIFHDDYLSRTTDG------------------DGL-IYKTPLAELKQLDAG-SWKG--Q 90 (252)
T ss_dssp HHHTTCSEEEEEEEECTTSCEEECCCSBSTTTSSC------------------CSB-GGGSCHHHHTTSCSS-TTTC--G
T ss_pred HHHcCCCEEEEEEEECCCCcEEEECCCccccccCC------------------Cce-eecCcHHHHhcCCCC-CccC--c
Confidence 34456779999999999999999999999999999 888 999999999999998 6665 5
Q ss_pred cCCCCCCCCChhhhhHHHHH-h------cCc------cHHHHHHHHHHHcCC--ceEEEeCCChHHHHHhhhhcCCCCcc
Q 005894 84 AFDNTQPIPTPDTIYDLFYS-Q------HNI------SAAKYITEYLQKLIS--NVYYISSPEIGFLKTMDRKVDHNTTK 148 (671)
Q Consensus 84 ~f~~~~~IptL~ev~~~~~~-~------~~~------~~~~~v~~~l~~~~~--~~~~isSf~~~~L~~i~~~~~~~~~~ 148 (671)
.|. +++||||+|+++.+.. . .+. .+++.+.+++++++. ++++++||++..|+.+++ ..| ..+
T Consensus 91 ~~~-~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~~~~~vii~SF~~~~l~~~~~-~~p-~~~ 167 (252)
T 3qvq_A 91 EYQ-QETIPTLLEAIEVISQYGMGLNLELKPCEGLEEETIAASVEVLKQHWPQDLPLLFSSFNYFALVSAKA-LWP-EIA 167 (252)
T ss_dssp GGT-TCCCCBHHHHHHHHHHTTCEEEEEECCCTTCHHHHHHHHHHHHHHHSCTTSCEEEEESCHHHHHHHHH-HCT-TSC
T ss_pred cCC-CCcCcCHHHHHHHHhccCcEEEEEecCCCCccHHHHHHHHHHHHHhCcccCCEEEEeCCHHHHHHHHH-HCC-CCc
Confidence 666 7999999999776532 1 121 256778899998873 589999999999999995 566 488
Q ss_pred eEEEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCc
Q 005894 149 LVFMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDI 227 (671)
Q Consensus 149 ~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~ 227 (671)
+.+.+... ...+. ..++. -+.++.+....+ ..++|+.+|++|++|++||||++.
T Consensus 168 ~~~l~~~~-------~~~~~------~~~~~~~~~~i~~~~~~~------------~~~~v~~~~~~G~~v~~WTvn~~~ 222 (252)
T 3qvq_A 168 RGYNVSAI-------PSAWQ------ERLEHLDCAGLHIHQSFF------------DVQQVSDIKAAGYKVLAFTINDES 222 (252)
T ss_dssp EEEECSSC-------CTTHH------HHHHHHTCSEEEEEGGGC------------CHHHHHHHHHTTCEEEEECCCCHH
T ss_pred EEEEEecC-------chhHH------HHHHHcCCeEEecchhhC------------CHHHHHHHHHCCCEEEEEcCCCHH
Confidence 88743221 11121 11221 245555544433 258999999999999999999875
Q ss_pred ccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894 228 YSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI 267 (671)
Q Consensus 228 ~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i 267 (671)
. ++++++.| ||||+||+|.....++
T Consensus 223 ~------------~~~l~~~G---VdgIiTD~P~~~~~~l 247 (252)
T 3qvq_A 223 L------------ALKLYNQG---LDAVFSDYPQKIQSAI 247 (252)
T ss_dssp H------------HHHHHHTT---CCEEEESSHHHHHHHH
T ss_pred H------------HHHHHHcC---CCEEEeCCHHHHHHHH
Confidence 4 88999999 9999999999876543
No 21
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=99.96 E-value=5.7e-30 Score=267.57 Aligned_cols=204 Identities=23% Similarity=0.266 Sum_probs=158.1
Q ss_pred cCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC----
Q 005894 6 CLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR---- 81 (671)
Q Consensus 6 ~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r---- 81 (671)
..+..+||||||+||||++||+||.+|+||||+ +|. |.|+|++||++++++ +||+.
T Consensus 50 ~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~------------------~g~-v~d~T~~eL~~l~~~-~~f~~~~p~ 109 (287)
T 2oog_A 50 ELKASYIEIDLQRTKDGHLVAMHDETVNRTTNG------------------HGK-VEDYTLDELKQLDAG-SWFNKKYPK 109 (287)
T ss_dssp TSCCSEEEEEEEECTTCCEEECSSSBSTTTSSC------------------CSB-GGGSCHHHHTTSCSS-HHHHHHCGG
T ss_pred HcCCCEEEEEeeEccCCcEEEECCChhcccCCC------------------Cee-hhhCcHHHHHhcCCC-cccCccCcc
Confidence 467779999999999999999999999999999 888 999999999999998 56541
Q ss_pred --CccCCCCCCCCChhhhhHHHHHhc------C-----ccHHHHHHHHHHHcCC--------ceEEEeCCChHHHHHhhh
Q 005894 82 --SEAFDNTQPIPTPDTIYDLFYSQH------N-----ISAAKYITEYLQKLIS--------NVYYISSPEIGFLKTMDR 140 (671)
Q Consensus 82 --~~~f~~~~~IptL~ev~~~~~~~~------~-----~~~~~~v~~~l~~~~~--------~~~~isSf~~~~L~~i~~ 140 (671)
...|. +++||||+|+++.+.... + ..+++.+++++++++. ++++|+||++..|+.+++
T Consensus 110 ~~~~~~~-~~~iPtL~evL~~~~~~~~l~IEiK~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~ 188 (287)
T 2oog_A 110 YARASYK-NAKVPTLDEILERYGPNANYYIETKSPDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHR 188 (287)
T ss_dssp GCCGGGT-TCCCCBHHHHHHHHCTTSCEEEECCCTTTSTTHHHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHH
T ss_pred ccccccC-CccCCCHHHHHHhhCcCceEEEEECCCCCcchHHHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHH
Confidence 12344 799999999977653221 2 2477899999999873 579999999999999995
Q ss_pred hcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEE
Q 005894 141 KVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYA 220 (671)
Q Consensus 141 ~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~ 220 (671)
..| ..++++.+.... .... .. ..+..++.++.++.+....+ + ..+|+.+|++|++|++
T Consensus 189 -~~p-~~~~~~l~~~~~-~~~~---~~----~~~~~~~~~~~~v~~~~~~~---~---------~~~v~~~~~~G~~v~~ 246 (287)
T 2oog_A 189 -QNK-HVPLVKLVDKGE-LQQF---ND----QRLKEIRSYAIGLGPDYTDL---T---------EQNTHHLKDLGFIVHP 246 (287)
T ss_dssp -HCT-TSCEEEEECTTT-GGGC---CH----HHHHHHHTTCSEEEEBGGGC---C---------HHHHHHHHHTTCEECC
T ss_pred -hCC-CCcEEEEecCCc-cccc---CH----HHHHHHhhhheEEcccHhhc---C---------HHHHHHHHHCCCeEEE
Confidence 556 488877543221 1100 00 12445666777777655444 2 5899999999999999
Q ss_pred eeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894 221 SGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI 267 (671)
Q Consensus 221 wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i 267 (671)
||||++.. ++++++.| ||||+||+|......+
T Consensus 247 wTvn~~~~------------~~~l~~~G---VdgIiTD~P~~~~~~~ 278 (287)
T 2oog_A 247 YTVNEKAD------------MLRLNKYG---VDGVFTNFADKYKEVI 278 (287)
T ss_dssp BCCCSHHH------------HHHHHHHT---CSEEEESCHHHHHHHH
T ss_pred EeCCCHHH------------HHHHHHcC---CCEEEeCCHHHHHHHH
Confidence 99998754 88999999 9999999998876543
No 22
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=99.95 E-value=8.2e-29 Score=256.80 Aligned_cols=208 Identities=16% Similarity=0.156 Sum_probs=150.0
Q ss_pred cccCCCeEEEeeceeecCCeEEeecCCcccc----cccccccccccccccccCCcccccccccccCHHHHcccccccccc
Q 005894 4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNN----ITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVY 79 (671)
Q Consensus 4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~Ldr----tT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~ 79 (671)
+...+..+||||||+||||++||+||.+|+| +||+..+++. .-.+++|.|+|++||++++++ +|+
T Consensus 32 A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~~~~~----------~~~~~~v~d~t~~eL~~l~~~-~~~ 100 (272)
T 3ch0_A 32 ALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVTEA----------NEKNFNLYAMNYADIKEIDVG-MKT 100 (272)
T ss_dssp HHHHTCSEEEEEEEECTTCCEEECSSSBCCTTTCCEETTEECCTT----------TGGGSBGGGSCHHHHTTSCCS-SSC
T ss_pred HHHcCCCEEEEeeeEcCCCcEEEeCCCcccccccccCCCcccccc----------cccCceeecCCHHHHHhcCCC-Ccc
Confidence 3345678999999999999999999999999 5666322221 113445999999999999998 566
Q ss_pred CCCccCCC----CCCCCChhhhhHHHHH---hc------Cc-------------cHHHHHHHHHHHcC-CceEEEeCCCh
Q 005894 80 TRSEAFDN----TQPIPTPDTIYDLFYS---QH------NI-------------SAAKYITEYLQKLI-SNVYYISSPEI 132 (671)
Q Consensus 80 ~r~~~f~~----~~~IptL~ev~~~~~~---~~------~~-------------~~~~~v~~~l~~~~-~~~~~isSf~~ 132 (671)
+ +.|++ ..+||||+|+++.+.. .. +. .+++.+++++++++ .++++|+||++
T Consensus 101 ~--~~~~~~~~~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~Sf~~ 178 (272)
T 3ch0_A 101 H--PRFKSQKKVPAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGDNIDHPNIALFCDLVVAEIKKAHITDRFTLQSFDV 178 (272)
T ss_dssp C--TTCTTSCCCCCCCCBHHHHHHHHHHHCSSCEEEEEECCCGGGBTTTBCCHHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred C--ccCcccccCCCCCcCHHHHHHHHHHhCCCceEEEEECCCcCcccccCccHHHHHHHHHHHHHHcCCCCcEEEEeCCH
Confidence 4 45551 2389999999776543 11 21 15788999999988 57899999999
Q ss_pred HHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHH
Q 005894 133 GFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAH 212 (671)
Q Consensus 133 ~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah 212 (671)
..|+.+++ ..| +.++++.+.... .+...++ .+..+++++++....+ ..++|+.+|
T Consensus 179 ~~l~~~~~-~~p-~~~~~~l~~~~~--------~~~~~~~---~~~~~~~~i~~~~~~~------------~~~~v~~~~ 233 (272)
T 3ch0_A 179 RALEYMHS-QYP-DIKLSYLVETKG--------TLKKQLE---KLSFTPAVYSPDVTLV------------SKKDIDAAH 233 (272)
T ss_dssp HHHHHHHH-HCT-TSEEEEEECSSC--------CHHHHHT---TSSSCCSEEEEBGGGC------------CHHHHHHHH
T ss_pred HHHHHHHH-HCC-CCcEEEEecCCC--------CHHHHHH---HcCCCCcEEccchhhc------------CHHHHHHHH
Confidence 99999995 556 488887543211 1111111 0111124444433322 368999999
Q ss_pred HcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccc
Q 005894 213 NAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTAT 264 (671)
Q Consensus 213 ~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~ 264 (671)
++|++|++||||++. +++++++.| ||||+||+|....
T Consensus 234 ~~Gl~v~~wTvn~~~------------~~~~l~~~G---vdgIiTD~P~~~~ 270 (272)
T 3ch0_A 234 KLGMRVIPWTVNTKE------------EIETLISLG---VDGIITDYPDLFF 270 (272)
T ss_dssp HTTCEECCBCCCSHH------------HHHHHHHHT---CSEEEESCGGGGT
T ss_pred HcCCEEEEeccCCHH------------HHHHHHHcC---CCEEEeCCHHHHh
Confidence 999999999999874 488999999 9999999998764
No 23
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=99.95 E-value=1.3e-28 Score=252.12 Aligned_cols=199 Identities=17% Similarity=0.097 Sum_probs=148.8
Q ss_pred cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894 4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE 83 (671)
Q Consensus 4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~ 83 (671)
+...+..+||||||+||||++||+||.+|+||||+ +|. +.|+|++||++++++. |
T Consensus 26 A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~------------------~g~-v~~~t~~el~~l~~~~-~----- 80 (250)
T 3ks6_A 26 TAAMALEEVEFDLHPTADGAIVVHHDPTLDATTDM------------------TGA-IVDMTLAKVKTATIRY-G----- 80 (250)
T ss_dssp HHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBSC------------------CSB-GGGSCHHHHHHCCBTT-S-----
T ss_pred HHHcCCCEEEEEEeEccCCCEEEECCCccccccCC------------------CCe-eecCcHHHHhcCCCCC-C-----
Confidence 34567779999999999999999999999999999 888 9999999999999983 2
Q ss_pred cCCCCCCCCChhhhhHHHHH-------hcC--------ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCc
Q 005894 84 AFDNTQPIPTPDTIYDLFYS-------QHN--------ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTT 147 (671)
Q Consensus 84 ~f~~~~~IptL~ev~~~~~~-------~~~--------~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~ 147 (671)
.+++||||+|+++.+.. +.+ ..+++.+++++++++ .++++++||++..|+.+++ ..| ..
T Consensus 81 ---~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~-~~p-~~ 155 (250)
T 3ks6_A 81 ---AGSHPMTLEELCALYVDSHVNFRCEIKPGVDGLPYEGFVALVIAGLERHSMLERTTFSSFLLASMDELWK-ATT-RP 155 (250)
T ss_dssp ---TTCCCEEHHHHHHHHTTCSCEEEEEECCCTTSCCCTTHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH-HCC-SC
T ss_pred ---CCccCcCHHHHHHHHhccCcEEEEEeCCCcccCcchHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHH-HCC-CC
Confidence 27999999999776531 122 257899999999998 5789999999999999995 666 46
Q ss_pred ceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCC
Q 005894 148 KLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAND 226 (671)
Q Consensus 148 ~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~ 226 (671)
++.+. . ... ..+..+...+...+.. ++.+++.... ...++|+.+|++|++|++||||++
T Consensus 156 ~~~l~-~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~v~~~~~~G~~V~~WTvn~~ 215 (250)
T 3ks6_A 156 RLWLV-S-PSV------LQQLGPGAVIETAIAHSIHEIGVHIDT------------ADAGLMAQVQAAGLDFGCWAAHTP 215 (250)
T ss_dssp EEEEE-C-HHH------HHHHHHHHHHHHHHHTTCCEEEEEGGG------------CCHHHHHHHHHTTCEEEEECCCSH
T ss_pred cEEEE-e-ccc------ccccchhHHHHHHHhcCCCEEecchhh------------CCHHHHHHHHHCCCEEEEEeCCCH
Confidence 66542 1 100 0001110111111111 2333332222 236899999999999999999988
Q ss_pred cccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894 227 IYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI 267 (671)
Q Consensus 227 ~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i 267 (671)
.. ++++++.| ||||+||+|......+
T Consensus 216 ~~------------~~~l~~~G---VDgIiTD~P~~~~~~~ 241 (250)
T 3ks6_A 216 SQ------------ITKALDLG---VKVFTTDRPTLAIALR 241 (250)
T ss_dssp HH------------HHHHHHHT---CSEEEESCHHHHHHHH
T ss_pred HH------------HHHHHHcC---CCEEEcCCHHHHHHHH
Confidence 54 88999999 9999999999876644
No 24
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=99.95 E-value=2.8e-28 Score=250.82 Aligned_cols=197 Identities=14% Similarity=0.128 Sum_probs=151.8
Q ss_pred cccCCCeEEEeeceeecCCeEEeecCC---cccccccccccccccccccccCCcccccccccccCHHHHccccccccccC
Q 005894 4 SNCLSNAIMLCNLQFSKDGLGVCLSDV---RLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYT 80 (671)
Q Consensus 4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~---~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~ 80 (671)
+...+..+||||||+||||++||+||. +|+||||+ +|. |.|+|++||++++++
T Consensus 32 A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~~------------------~g~-v~~~t~~eL~~l~~~----- 87 (258)
T 2o55_A 32 CMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKDG------------------TSR-IGDLSLEELKRLDVG----- 87 (258)
T ss_dssp HHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTTT------------------TCB-GGGSCHHHHTTCBSS-----
T ss_pred HHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCCC------------------Cee-hhhCcHHHHhhcCCC-----
Confidence 345677899999999999999999999 99999999 888 999999999999987
Q ss_pred CCccCCCCCCCCChhhhhHHHHH---hc------C--------ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhc
Q 005894 81 RSEAFDNTQPIPTPDTIYDLFYS---QH------N--------ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKV 142 (671)
Q Consensus 81 r~~~f~~~~~IptL~ev~~~~~~---~~------~--------~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~ 142 (671)
++++||||+|+++.+.. .. + ..+++.+++++++++ .++++|+||++..|+.+++ .
T Consensus 88 ------~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~-~ 160 (258)
T 2o55_A 88 ------GGHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKRKESGDHQRLLLLVEKYHMQERVDYCSFHHEALAHLKA-L 160 (258)
T ss_dssp ------SSCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSSTTSSHHHHHHHHHHTTTCGGGEEEEESSHHHHHHHHH-H
T ss_pred ------CCCccCCHHHHHHHhhhhcCceEEEEEEccCCccccchHHHHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHH-H
Confidence 27999999999776543 21 2 247889999999998 5789999999999999995 5
Q ss_pred CCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEe
Q 005894 143 DHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYAS 221 (671)
Q Consensus 143 ~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~w 221 (671)
.| ..++.+.+....... ...+ +..++. .++++++....+ ..++|+.+|++|++|++|
T Consensus 161 ~p-~~~~~~l~~~~~~~~---~~~~------~~~~~~~~~~~v~~~~~~~------------~~~~v~~~~~~G~~v~~w 218 (258)
T 2o55_A 161 CP-DVKITYLFNYMGQPT---PLDF------VEQACYGDANGVSMLFHYL------------TKEQVCTAHEKGLSVTVW 218 (258)
T ss_dssp CT-TCEEEEECCTTSCCC---CTTH------HHHHHHTTCSEEEEEGGGC------------CHHHHHHHHHTTCEEEEE
T ss_pred CC-CCcEEEEEeCCCCCC---HHHH------HHHHHhcCCeEEecChhhc------------CHHHHHHHHHCCCEEEEe
Confidence 56 478776431211111 1111 111222 256666554433 258999999999999999
Q ss_pred ee----cCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccccC
Q 005894 222 GF----ANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAID 268 (671)
Q Consensus 222 tv----~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i~ 268 (671)
|| |++ .+++++++.| ||||+||+|.....++.
T Consensus 219 Tv~~~~n~~------------~~~~~l~~~G---vdgI~TD~p~~~~~~l~ 254 (258)
T 2o55_A 219 MPWIFDDSE------------EDWKKCLELQ---VDLICSNYPFGLMNFLS 254 (258)
T ss_dssp CCTTCCCCH------------HHHHHHHHHT---CSEEEESCHHHHHHHHT
T ss_pred eCCCCCCCH------------HHHHHHHHcC---CCEEEeCCHHHHHHHHH
Confidence 99 554 4589999999 99999999998766543
No 25
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=99.95 E-value=2.6e-28 Score=258.04 Aligned_cols=224 Identities=15% Similarity=0.151 Sum_probs=154.3
Q ss_pred cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCccc--ccccccccCHHHHccccccccccC-
Q 005894 4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNV--RGWFSVDYTLEQLGQLYLVQNVYT- 80 (671)
Q Consensus 4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~--~G~~v~d~T~~EL~~l~~~~~~~~- 80 (671)
+...+..+||||||+||||++||+||.+|+|||+.. .||... .++.|.|+|++||++++++..++.
T Consensus 41 A~~~G~d~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~-----------~~G~~~~~~~~~v~~~t~~eL~~l~~~~~~~~~ 109 (313)
T 3l12_A 41 TLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRD-----------GQGHWLTGAERQVAEMTYAEIRALDVGGLDGRT 109 (313)
T ss_dssp HHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTCBC-----------TTSCBCCSSCCBGGGSCHHHHHTSBCSSCCTTS
T ss_pred HHHcCCCEEEEEEEECCCCCEEEECCchhccccccc-----------CCCcccCCCCcchhcCcHHHHhhCCCCCccccc
Confidence 345577799999999999999999999999996531 122211 123499999999999999841111
Q ss_pred -CCccCC-----CCCCCCChhhhhHHHHH----h------cCc------------cHHHHHHHHHHHcC-CceEEEeCCC
Q 005894 81 -RSEAFD-----NTQPIPTPDTIYDLFYS----Q------HNI------------SAAKYITEYLQKLI-SNVYYISSPE 131 (671)
Q Consensus 81 -r~~~f~-----~~~~IptL~ev~~~~~~----~------~~~------------~~~~~v~~~l~~~~-~~~~~isSf~ 131 (671)
..+.|+ .+++||||+|+++.+.. . .+. .+++.+++++++++ .++++|+||+
T Consensus 110 ~~~~~~~~~~~~~g~~iptL~evl~~~~~~~~~~~~l~IEiK~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~SF~ 189 (313)
T 3l12_A 110 VYGRRFPDQAFLTGIHVPRLGELLDLCAGYGDQAPYLLLELKSDPALMHDHAARAEMVAAVLADVRRYRMEPRTVMHSFD 189 (313)
T ss_dssp HHHHHSTTSCCCSSCCCCBHHHHHHHHHTTGGGCCEEEEEECCCGGGTTCHHHHHHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred cccccCccccccCCCcCCCHHHHHHHHHhcCCCCceEEEEEccCCccccccccHHHHHHHHHHHHHHcCCCCCEEEEcCC
Confidence 002332 36999999999776543 1 121 36788999999998 5789999999
Q ss_pred hHHHHHhhhhcCCCCcceEEEecCCCCcCC-------CCCCCHHHHhhc-HHHHHHh-hceecCCCcceeecCCCCCCcC
Q 005894 132 IGFLKTMDRKVDHNTTKLVFMVLEPNAVEP-------TTNQTYGSILKN-LTAIKSF-ASGIVVPKSYIIPVNNKTRYLE 202 (671)
Q Consensus 132 ~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~-------~~~~~y~~~~~~-l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~ 202 (671)
+..|+++++ ..| +.++.+.......... .....|.....+ ...++.. ++++++.+..+
T Consensus 190 ~~~l~~~~~-~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------- 256 (313)
T 3l12_A 190 WALLGECRR-QAP-DLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLPQAVASAGGQLWCPYFLDV----------- 256 (313)
T ss_dssp HHHHHHHHH-HCT-TSCEEEEECCCC-------------CCCTTTCCSCHHHHHHHHTCSEEEEBGGGC-----------
T ss_pred HHHHHHHHH-HCC-CCcEEEEeccccccccccccccccccccchhccccHHHHHHHhCCcEEecchhcC-----------
Confidence 999999995 566 5888875433221000 000001000001 1122222 45665554433
Q ss_pred CCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894 203 PATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI 267 (671)
Q Consensus 203 ~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i 267 (671)
..++|+.||++|++|++||||++.. ++++++.| ||||+||+|.....++
T Consensus 257 -~~~~v~~~~~~Gl~V~~WTVn~~~~------------~~~l~~~G---VDgIiTD~P~~~~~~l 305 (313)
T 3l12_A 257 -TPELVAEAHDLGLIVLTWTVNEPED------------IRRMATTG---VDGIVTDYPGRTQRIL 305 (313)
T ss_dssp -CHHHHHHHHHTTCEEEEBCCCSHHH------------HHHHHHHT---CSEEEESCHHHHHHHH
T ss_pred -CHHHHHHHHHCCCEEEEEcCCCHHH------------HHHHHHcC---CCEEEeCCHHHHHHHH
Confidence 2589999999999999999998854 89999999 9999999999887643
No 26
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=99.95 E-value=2.5e-28 Score=249.79 Aligned_cols=192 Identities=11% Similarity=0.024 Sum_probs=148.6
Q ss_pred cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894 4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE 83 (671)
Q Consensus 4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~ 83 (671)
+...+..+||||||+||||++||+||.+|+||||+ +|+ |.|+|++||++++++.
T Consensus 25 A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~Rtt~~------------------~g~-v~~~t~~eL~~l~~g~------- 78 (248)
T 1zcc_A 25 ALQQGADYIELDVRESADGVLYVIHDETLDRTTNG------------------TGP-VGHMLSSEIDTLDAGG------- 78 (248)
T ss_dssp HHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSSC------------------CSB-STTSCHHHHTTSCSST-------
T ss_pred HHHcCCCEEEEEeeEcCCCCEEEECCCccccccCC------------------Ccc-hhhCCHHHHHhCCCCC-------
Confidence 34567789999999999999999999999999999 898 9999999999999872
Q ss_pred cCCCCCCCCChhhhhHHH-------HHhcCc------cHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcce
Q 005894 84 AFDNTQPIPTPDTIYDLF-------YSQHNI------SAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKL 149 (671)
Q Consensus 84 ~f~~~~~IptL~ev~~~~-------~~~~~~------~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~ 149 (671)
+++||||+|+++.+ ..+.+. .+++.+++++++++ .++++|+||++..|+.+++ ..| +.++
T Consensus 79 ----~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~-~~p-~~~~ 152 (248)
T 1zcc_A 79 ----WFDDRFKGAIVPRLDAYLEHLRGRAGVYIELKYCDPAKVAALVRHLGMVRDTFYFSFSEEMRQGLQS-IAP-EFRR 152 (248)
T ss_dssp ----TTCGGGTTCCCCBHHHHHHHHTTTCEEEEEEEESCHHHHHHHHHHHTCSTTEEEECSCHHHHHHHHH-HCT-TSEE
T ss_pred ----CCCCCCHHHHHHHHHhcCcEEEEEeCCCCCcccHHHHHHHHHHHHhCCCCCEEEEECCHHHHHHHHH-HCC-CCcE
Confidence 46899999994322 223221 14789999999998 5789999999999999995 556 4777
Q ss_pred EEEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcc
Q 005894 150 VFMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIY 228 (671)
Q Consensus 150 v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~ 228 (671)
.+.+..... . ...++. .++++.+....+. ..++|+.+|++|++|++||||++..
T Consensus 153 ~~l~~~~~~--------~------~~~~~~~~~~~i~~~~~~~~-----------~~~~v~~~~~~G~~v~~wTvn~~~~ 207 (248)
T 1zcc_A 153 MMTLDIAKS--------P------SLVGAVHHASIIEITPAQMR-----------RPGIIEASRKAGLEIMVYYGGDDMA 207 (248)
T ss_dssp EEEHHHHSS--------T------HHHHHTTCCSEEEECHHHHH-----------SHHHHHHHHHHTCEEEEECCCCCHH
T ss_pred EEEecCCcc--------H------HHHHHHcCCCEEEecHHHhC-----------CHHHHHHHHHCCCEEEEECCCCHHH
Confidence 764321100 0 122222 2566666544330 2589999999999999999998854
Q ss_pred cCCCCCCChHHHHHH-HhhcCceeeeeEeecCCCcccccc
Q 005894 229 SSYSYNFEPEAEYLT-FIDNSQFAVDGFITDFPTTATEAI 267 (671)
Q Consensus 229 ~~~~~~~d~~~e~~~-~i~~g~~~Vdgv~td~p~~~~~~i 267 (671)
+++ +++.| ||||+||+|.....++
T Consensus 208 ------------~~~~l~~~G---vdgIiTD~p~~~~~~~ 232 (248)
T 1zcc_A 208 ------------VHREIATSD---VDYINLDRPDLFAAVR 232 (248)
T ss_dssp ------------HHHHHHHSS---CSEEEESCHHHHHHHH
T ss_pred ------------HHHHHHHcC---CCEEEECCHHHHHHHH
Confidence 889 99999 9999999999876643
No 27
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=99.94 E-value=1.9e-27 Score=248.43 Aligned_cols=211 Identities=17% Similarity=0.160 Sum_probs=151.8
Q ss_pred ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCcc
Q 005894 5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEA 84 (671)
Q Consensus 5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~ 84 (671)
...+..+||||||+||||++||+||.+|+||||+ +|. |.|+|++||++++++. +. ..
T Consensus 57 ~~~g~d~iE~Dv~~TkDg~~Vv~HD~~l~rtt~~------------------~g~-v~~~t~~el~~l~~~~-~~---~~ 113 (292)
T 3mz2_A 57 LSYTPATFEIDPRLTKDSVIVLFHDDTLERTSNG------------------TGK-VSDYTWEELQNFRLKD-PE---GN 113 (292)
T ss_dssp HHHCCCEEEECEEECTTCCEEECCSSSSTTTBSC------------------CSC-GGGSCHHHHTTSCBBC-TT---CC
T ss_pred HHcCCCEEEEEEeECCCCcEEEECCchhcccCCC------------------CCc-hhhCcHHHHhcCCCCC-CC---Cc
Confidence 3456789999999999999999999999999999 787 9999999999999973 22 23
Q ss_pred CCCCCCCCChhhhhHHHHHhc------CccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcceEEEecCCC
Q 005894 85 FDNTQPIPTPDTIYDLFYSQH------NISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPN 157 (671)
Q Consensus 85 f~~~~~IptL~ev~~~~~~~~------~~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~~ 157 (671)
|. +++||||+|+++.+.... +..-.+.+++++++++ .++++++||++..|+++++ ..| +.++.+.+...
T Consensus 114 ~~-~~~iptL~evl~~~~~~~~l~iE~K~~~~~~v~~~l~~~~~~~~vii~Sf~~~~l~~~~~-~~p-~~~~~~l~~~~- 189 (292)
T 3mz2_A 114 IT-NYRIPTLEEAIRWARGKTILILDKKDVPMERTAQLITDMQAEPYVMITVHDGASARFFYE-KNP-NFMFEAFVKTK- 189 (292)
T ss_dssp BC-SCCCCBHHHHHHHHTTTCCEEECCSSSCHHHHHHHHHHTTCTTTEEEEESSHHHHHHHHH-HCT-TCCEEEECCSH-
T ss_pred cC-CcCCCCHHHHHHHhCCCcEEEEEECCCcHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHH-HCC-CCeEEEEeCCH-
Confidence 44 789999999977653321 2233478899999998 6799999999999999995 567 47877643110
Q ss_pred CcCCCCCCCHHHHhhcHHHHHHhhceecCC--CcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCC
Q 005894 158 AVEPTTNQTYGSILKNLTAIKSFASGIVVP--KSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNF 235 (671)
Q Consensus 158 ~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~--~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~ 235 (671)
..+..+.. .|+... ..++.| .|.....++|+.||++|++|++||||+..... -..
T Consensus 190 --------------~~l~~~~~--~g~~~~~~~~~~~~-----~~~~~~~~~V~~ah~~G~~V~vWTv~t~d~~~--~~~ 246 (292)
T 3mz2_A 190 --------------EAVQDYED--NGIPWSHIMAYVGP-----KITPEVREVIDMLHERGVMCMISTAPSDDKLS--TPE 246 (292)
T ss_dssp --------------HHHHHHHH--TTCCGGGEEEEEES-----SCCHHHHHHHHHHHHTTBCEEEECTTTGGGSS--SHH
T ss_pred --------------HHHHHHHH--hCCChhheeeeecc-----cccccCHHHHHHHHHCCCEEEEEeCCCcchhh--hcc
Confidence 11222211 111000 011111 12122358999999999999999998743200 001
Q ss_pred ChHHHHHHHhhcCceeeeeEeecCCCccccccC
Q 005894 236 EPEAEYLTFIDNSQFAVDGFITDFPTTATEAID 268 (671)
Q Consensus 236 d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i~ 268 (671)
++..+|+++++.| ||||+||+|.....++.
T Consensus 247 ~~~~~~~~L~~~G---VDgIiTD~P~~l~~~L~ 276 (292)
T 3mz2_A 247 SRAEAYRMIIRQG---VDIIESDRPIEVAEAIS 276 (292)
T ss_dssp HHHHHHHHHHHTT---CCEEEESCHHHHHHHHG
T ss_pred ccHHHHHHHHHcC---CCEEEeCCHHHHHHHHH
Confidence 3346799999999 99999999999888664
No 28
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=99.93 E-value=1.3e-26 Score=235.44 Aligned_cols=185 Identities=15% Similarity=0.149 Sum_probs=141.7
Q ss_pred cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894 4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE 83 (671)
Q Consensus 4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~ 83 (671)
+...+..+||||||+||||++||+||.+|+| + . +.|+|++||++++++
T Consensus 30 A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~---~--------------------~-v~~~t~~el~~l~~~-------- 77 (238)
T 3no3_A 30 ASEIGAYGSEFDVHLTADNVLVVYHDNDIQG---K--------------------H-IQSCTYDELKDLQLS-------- 77 (238)
T ss_dssp HHHTTCSEEEEEEEECTTSCEEECSSSEETT---E--------------------E-GGGSCHHHHTTCBCT--------
T ss_pred HHHcCCCEEEEEeeEccCCcEEEECCCCCCC---C--------------------C-hHhCCHHHHhhCCCC--------
Confidence 3345778999999999999999999999996 2 3 999999999999987
Q ss_pred cCCCCCCCCChhhhhHHHHHh--------cC--------ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCC
Q 005894 84 AFDNTQPIPTPDTIYDLFYSQ--------HN--------ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNT 146 (671)
Q Consensus 84 ~f~~~~~IptL~ev~~~~~~~--------~~--------~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~ 146 (671)
++++||||+|+++.+... .+ ..+++.+++++++++ .++++++||++..|+.+++ ..| .
T Consensus 78 ---~~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~-~~p-~ 152 (238)
T 3no3_A 78 ---NGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIR-LCP-K 152 (238)
T ss_dssp ---TSCBCCBHHHHHHHHHHCTTCEEEEEECCCSSHHHHHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH-HCT-T
T ss_pred ---CCCcCCcHHHHHHHHhhcCCceEEEEeCCCCCcchhHHHHHHHHHHHHHcCCcCCEEEEECCHHHHHHHHH-HCC-C
Confidence 279999999997765432 12 136788999999998 5789999999999999995 667 4
Q ss_pred cceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecC
Q 005894 147 TKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAN 225 (671)
Q Consensus 147 ~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~ 225 (671)
.++.+... . . . ...++.. +.++.+....+ ....++|+.+|++|++|++||||+
T Consensus 153 ~~~~~l~~-~-~-------~-------~~~~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~~G~~v~~WTVn~ 206 (238)
T 3no3_A 153 SEVSYLNG-E-L-------S-------PMELKELGFTGLDYHYKVL----------QSHPDWVKDCKVLGMTSNVWTVDD 206 (238)
T ss_dssp SCEEECSS-C-S-------C-------HHHHHHTTCCEEEEEHHHH----------HHSTTHHHHHHHTTCEEEEECCCS
T ss_pred CeEEEEeC-C-C-------C-------HHHHHHCCCceEeccHHhh----------hCCHHHHHHHHHCCCEEEEECCCC
Confidence 88876321 1 1 0 1122222 44444332211 112479999999999999999998
Q ss_pred CcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccc
Q 005894 226 DIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA 266 (671)
Q Consensus 226 ~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~ 266 (671)
+.. ++++++.| ||||+||+|......
T Consensus 207 ~~~------------~~~l~~~G---VdgIiTD~P~~~~~~ 232 (238)
T 3no3_A 207 PKL------------MEEMIDMG---VDFITTDLPEETQKI 232 (238)
T ss_dssp HHH------------HHHHHHHT---CSEEEESCHHHHHHH
T ss_pred HHH------------HHHHHHcC---CCEEECCCHHHHHHH
Confidence 854 88999999 999999999987764
No 29
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=99.93 E-value=1.8e-26 Score=233.84 Aligned_cols=189 Identities=19% Similarity=0.185 Sum_probs=139.4
Q ss_pred cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894 4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE 83 (671)
Q Consensus 4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~ 83 (671)
+...+..+||||||+||||++||+||.+|+||||+ +|. |.|+|++||++++
T Consensus 36 A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~------------------~g~-v~d~T~~eL~~l~---------- 86 (234)
T 1o1z_A 36 AIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGL------------------DVK-IRDATVSELKELT---------- 86 (234)
T ss_dssp HHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHCE------------------EEE-GGGSCHHHHHHHT----------
T ss_pred HHHcCCCEEEEEeeEecCCCEEEEcCCcHHhcCCc------------------CcC-cccCcHHHHhcCC----------
Confidence 34567779999999999999999999999999999 888 9999999999987
Q ss_pred cCCCCCCCCChhhhhHHHHHhc-------CccHHHHHHHHHHHcCCceEEEeCCChHHHHHhhhhcCCCCcceEEEecCC
Q 005894 84 AFDNTQPIPTPDTIYDLFYSQH-------NISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEP 156 (671)
Q Consensus 84 ~f~~~~~IptL~ev~~~~~~~~-------~~~~~~~v~~~l~~~~~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~ 156 (671)
+++||||+|+++.+.... ...+++.+++++++ .++++++||+ |+.+++ ..| +.++.+.+...
T Consensus 87 ----~~~iptL~evL~~~~~~~~l~iEiK~~~~~~~v~~~l~~--~~~vii~Sf~---l~~~~~-~~p-~~~~~~l~~~~ 155 (234)
T 1o1z_A 87 ----DGKITTLKEVFENVSDDKIINIEIKEREAADAVLEISKK--RKNLIFSSFD---LDLLDE-KFK-GTKYGYLIDEE 155 (234)
T ss_dssp ----TTCCCBHHHHHHHSCTTSEEEEEECCGGGHHHHHHHHTT--CCSEEEEESC---HHHHHH-HCT-TSCEEEECCTT
T ss_pred ----CCCCCCHHHHHHhcccCCeEEEEeCCccHHHHHHHHHhc--cCCEEEEchh---HHHHHh-hCC-CCcEEEEeccc
Confidence 478999999977653321 23567889999988 4589999999 888885 556 47877643221
Q ss_pred CCcCCCCCCCHHHHhhcHHHHH-HhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCC
Q 005894 157 NAVEPTTNQTYGSILKNLTAIK-SFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNF 235 (671)
Q Consensus 157 ~~~~~~~~~~y~~~~~~l~~i~-~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~ 235 (671)
. . ..+.... ..+. ...+++.++...+. .+ ....+|+.+|++|++|++||||++..
T Consensus 156 ~----~--~~~~~~~---~~~~~~~~~~i~~~~~~~g-~~-------~~~~~v~~~~~~G~~v~~wTvn~~~~------- 211 (234)
T 1o1z_A 156 N----Y--GSIENFV---ERVEKERPYSLHVPYQAFE-LE-------YAVEVLRSFRKKGIVIFVWTLNDPEI------- 211 (234)
T ss_dssp T----T--CSHHHHH---HHHHHHCCSEEEEEGGGGG-SH-------HHHHHHHHHHHTTCEEEEESCCCHHH-------
T ss_pred c----c--cCHHHHH---HHcCCCCCCEEEeCHHHhc-CC-------ccHHHHHHHHHcCCEEEEeCCCCHHH-------
Confidence 1 0 0111111 1121 12266666544330 00 01489999999999999999998744
Q ss_pred ChHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894 236 EPEAEYLTFIDNSQFAVDGFITDFPTTATE 265 (671)
Q Consensus 236 d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~ 265 (671)
++++++ + ||||+||+|.....
T Consensus 212 -----~~~l~~---~-vdgIiTD~P~~~~~ 232 (234)
T 1o1z_A 212 -----YRKIRR---E-IDGVITDEVELFVK 232 (234)
T ss_dssp -----HHHHGG---G-CSEEEESCHHHHHH
T ss_pred -----HHHHHH---h-CCEEEcCCHHHHhh
Confidence 888885 5 99999999987654
No 30
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.92 E-value=4.9e-25 Score=228.01 Aligned_cols=214 Identities=16% Similarity=0.160 Sum_probs=151.0
Q ss_pred ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCcc
Q 005894 5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEA 84 (671)
Q Consensus 5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~ 84 (671)
...+..+||||||+||||++||+||.+|+||||+ +|. |.|+|++||++++++ +++. .
T Consensus 42 ~~~g~d~iE~Dv~~TkDg~~vv~HD~~l~r~t~~------------------~g~-v~~~t~~el~~l~~~-~~~~---~ 98 (278)
T 3i10_A 42 IAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTTG------------------KGE-IKNWTLADIKKLKLK-DKDG---K 98 (278)
T ss_dssp HHTTCSEEEEEEEECTTSCEEECSSSBSTTTBSC------------------CSB-GGGSCHHHHTTSCBB-CTTS---C
T ss_pred HHcCCCEEEEEEEECCCCeEEEecCcchhhcCCC------------------Cce-eecCcHHHHhcCCCC-CCCc---c
Confidence 3456779999999999999999999999999999 887 999999999999998 4432 2
Q ss_pred CCCCCCCCChhhhhHHHHHh------cCccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCC-CcceEEE-ecC
Q 005894 85 FDNTQPIPTPDTIYDLFYSQ------HNISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHN-TTKLVFM-VLE 155 (671)
Q Consensus 85 f~~~~~IptL~ev~~~~~~~------~~~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~-~~~~v~~-~~~ 155 (671)
| .+++||||+|+++.+... .+..+++.+++++++++ .++++|+| ...|+++++.. |. .+.+.|. ...
T Consensus 99 ~-~~~~iptL~evl~~~~~~~~~nie~~~~~~~~v~~~l~~~~~~~~v~i~s--~~~l~~~~~~~-p~~~~~~l~~p~i~ 174 (278)
T 3i10_A 99 V-TNYVVPTLEEALLTAKGKIMVNLDKAYDIFDDVYAILEKTETQNQVIMKG--GQPIETVKREF-GSYLDKVLYMPVID 174 (278)
T ss_dssp B-CSCCCCBHHHHHHHHTTTSEEEEESCGGGHHHHHHHHHHHTCGGGEEEEE--SSCHHHHHHHH-GGGTTTSEEEEEEE
T ss_pred c-CCCCCCCHHHHHHHhcCCeEEEEecCchHHHHHHHHHHHcCCCCeEEEEE--hHHHHHHHHHC-cCCccceEEEeeec
Confidence 3 379999999997765322 24467899999999998 67899988 34577777433 32 2333331 111
Q ss_pred CCCcCCCCCCCHHHHhhcHHHHHHhhceecCC-CcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCC
Q 005894 156 PNAVEPTTNQTYGSILKNLTAIKSFASGIVVP-KSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYN 234 (671)
Q Consensus 156 ~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~-~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~ 234 (671)
. .++ .....++.|++.+.+. ....++. +......+|+.+|++|++|++||+-+... ..+.
T Consensus 175 ~--~~~----------~~~~~i~~~~~~~~p~~~~~~~~~-----~~~~~~~~v~~~~~~g~~v~~nTlw~~~~--~g~~ 235 (278)
T 3i10_A 175 L--GNK----------EAEKIITDYLKELRPAAFEIIYSD-----PKNPLPPKIKQLLFKKSLIWYNTLWGSLA--GNHD 235 (278)
T ss_dssp T--TST----------THHHHHHHHHHHTCCSEEEEEBCC-----TTCSSHHHHHHHHTTTSEEEEECSSGGGB--TTCC
T ss_pred c--ccc----------chHHHHHHHHHhcCceEEEEeecC-----CccchHHHHHHHHHCCCEEEEEecccccc--cCcc
Confidence 0 010 1234455555444333 2222221 12233689999999999999999754321 1121
Q ss_pred -----CChHHHHHHHhhc-CceeeeeEeecCCCcccccc
Q 005894 235 -----FEPEAEYLTFIDN-SQFAVDGFITDFPTTATEAI 267 (671)
Q Consensus 235 -----~d~~~e~~~~i~~-g~~~Vdgv~td~p~~~~~~i 267 (671)
.||..++.++++. | ||+|+||+|.....++
T Consensus 236 d~~a~~d~~~~~~~l~~~~G---vd~I~TD~P~~l~~yL 271 (278)
T 3i10_A 236 DNLALTDPEKSYGYLIEQLG---ARILQTDQPAYLLDYL 271 (278)
T ss_dssp HHHHHHCHHHHHHHHHHTTC---EEEEEESCHHHHHHHH
T ss_pred chhhccChHHHHHHHHhcCC---CCEEEeCCHHHHHHHH
Confidence 1777889999999 9 9999999999887654
No 31
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=99.91 E-value=5.8e-25 Score=221.33 Aligned_cols=177 Identities=16% Similarity=0.115 Sum_probs=135.2
Q ss_pred cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894 4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE 83 (671)
Q Consensus 4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~ 83 (671)
+...+..+||||||+||||++||+||.+|+ + |+ |.|+|++||++++
T Consensus 31 A~~~G~d~iE~DV~lT~Dg~lVv~HD~~l~---~--------------------g~-v~~~t~~eL~~l~---------- 76 (224)
T 1vd6_A 31 ALEAGLDGVELDVWPTRDGVFAVRHDPDTP---L--------------------GP-VFQVDYADLKAQE---------- 76 (224)
T ss_dssp HHHTTCSEEEEEEEECTTSCEEECSCSEET---T--------------------EE-GGGSCHHHHHHHS----------
T ss_pred HHHcCCCEEEEEeeEecCCcEEEECCCccC---C--------------------CC-hhhCCHHHHHhcC----------
Confidence 345577799999999999999999999998 2 45 9999999999886
Q ss_pred cCCCCCCCCChhhhhHHHH--Hhc------Cc------cHHHHHHHHHHHcCCceEEEeCCChHHHHHhhhhcCCCCcce
Q 005894 84 AFDNTQPIPTPDTIYDLFY--SQH------NI------SAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKL 149 (671)
Q Consensus 84 ~f~~~~~IptL~ev~~~~~--~~~------~~------~~~~~v~~~l~~~~~~~~~isSf~~~~L~~i~~~~~~~~~~~ 149 (671)
++||||+|+++.+. ... +. .+++.+++++++ .++++++||++..|+.+++ ..| ..++
T Consensus 77 -----~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~--~~~v~i~Sf~~~~l~~~~~-~~p-~~~~ 147 (224)
T 1vd6_A 77 -----PDLPRLEEVLALKEAFPQAVFNVELKSFPGLGEEAARRLAALLRG--REGVWVSSFDPLALLALRK-AAP-GLPL 147 (224)
T ss_dssp -----TTCCBHHHHHGGGGTCTTCEEEEEECCCTTSHHHHHHHHHHHTTT--CSSEEEEESCHHHHHHHHH-HCT-TSCE
T ss_pred -----CCCCCHHHHHHhhhccCCceEEEEECCCCCccHHHHHHHHHHHhc--CCcEEEEeCCHHHHHHHHH-HCC-CCCE
Confidence 67999999977654 111 21 267788888887 4589999999999999995 556 4788
Q ss_pred EEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCccc
Q 005894 150 VFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYS 229 (671)
Q Consensus 150 v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~ 229 (671)
.+.+.... ...++. ..++++++....+ ...+|+.+|++|++|++||||++..
T Consensus 148 ~~l~~~~~----------~~~~~~-----~~~~~i~~~~~~~------------~~~~v~~~~~~G~~v~~wtvn~~~~- 199 (224)
T 1vd6_A 148 GFLMAEDH----------SALLPC-----LGVEAVHPHHALV------------TEEAVAGWRKRGLFVVAWTVNEEGE- 199 (224)
T ss_dssp EEEESSCC----------GGGGGG-----SCCSEEEEBGGGC------------CHHHHHHHHHTTCEEEEECCCCHHH-
T ss_pred EEEecccc----------HHHHHH-----cCCcEEecCcccC------------CHHHHHHHHHCCCEEEEEeCCCHHH-
Confidence 76543210 011111 1245565554433 2589999999999999999998744
Q ss_pred CCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894 230 SYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATE 265 (671)
Q Consensus 230 ~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~ 265 (671)
++++++.| ||||+||+|.....
T Consensus 200 -----------~~~l~~~G---vdgI~TD~p~~~~~ 221 (224)
T 1vd6_A 200 -----------ARRLLALG---LDGLIGDRPEVLLP 221 (224)
T ss_dssp -----------HHHHHHTT---CSEEEESCHHHHTT
T ss_pred -----------HHHHHhcC---CCEEEcCCHHHHHH
Confidence 88999999 99999999988665
No 32
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=99.86 E-value=2.2e-21 Score=197.72 Aligned_cols=228 Identities=11% Similarity=0.081 Sum_probs=147.8
Q ss_pred ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc---ccccCcccccccccccccccccccc
Q 005894 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL---IGKTTAATVFMSKATSVPEIQKERG 346 (671)
Q Consensus 270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L---~rtT~~~~~f~~r~~~~~~~~~~~G 346 (671)
..+|||| |||++||+.|++.||++||+||++|+||++|++||... .|.++ .+
T Consensus 29 ~~~i~H~-------vNTl~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~------------------~~ 83 (302)
T 3rlg_A 29 IWIMGAM-------VNAIGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCK------------------KY 83 (302)
T ss_dssp EEEEESC-------CCSHHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSC------------------CC
T ss_pred eEEEeeh-------hhhHHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhccCC------------------CC
Confidence 3799997 99999999999999999999999999999999999844 44444 11
Q ss_pred cccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhh---hcCCcH
Q 005894 347 IFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLAS---KKGLGV 423 (671)
Q Consensus 347 ~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~---~~~~~~ 423 (671)
..+.+ .+++|+++... .++.|.. +.+-+.+++|......+ ..|..+
T Consensus 84 ~~~~~-~l~~lr~~ttp-------------g~~k~~~-----------------~l~lv~~DlK~~~l~~~~~~~aG~~l 132 (302)
T 3rlg_A 84 ENFND-FLKGLRSATTP-------------GNSKYQE-----------------KLVLVVFDLKTGSLYDNQANDAGKKL 132 (302)
T ss_dssp CBHHH-HHHHHHHHHST-------------TSTTCCT-----------------TCCEEEEEECGGGSCGGGHHHHHHHH
T ss_pred ccHHH-HHHHHHHhcCC-------------CCCcccc-----------------ceEEEEEEcCCCCCCHHHHHHhHHHH
Confidence 13445 77888775532 0122211 23468999997654432 234455
Q ss_pred HHHHHHHHHhcCCCCCCCceEEEEcCChHHHHH---Hh----cCC--C--ceEEEEeecccCCCChhHHHHHHHHHHHhc
Q 005894 424 VDAVTKALSNATFDKQSTQQVMIQSDDSSVLSK---FQ----DVP--A--YKKVLHIRKEVSAAPREVVEEIKKYASAVT 492 (671)
Q Consensus 424 ~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~---lk----~~p--~--~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~ 492 (671)
++++++.+-+.|....+ -.|++|+|+.+.++. ++ +.. + -+++|-+... ..+.++.+.....|
T Consensus 133 a~kLl~~~w~~g~~~~r-a~vilsi~~~~~~~~l~gf~~~l~~~g~~~LldkvG~Dfs~n------~dl~~i~~~~~~~G 205 (302)
T 3rlg_A 133 AKNLLQHYWNNGNNGGR-AYIVLSIPDLNHYPLIKGFKDQLTKDGHPELMDKVGHDFSGN------DDIGDVGKAYKKAG 205 (302)
T ss_dssp HHHHHHHTSGGGSSCCC-CEEEEEESCGGGTHHHHHHHHHHHHTTCGGGGGGEEEEECSC------CCHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCce-eEEEEecCcchHHHHHHHHHHHHhhcCHHHHhhhcCccccCC------CCHHHHHHHHHhcC
Confidence 56665555554444332 499999998874443 33 221 1 1345544221 23566666666666
Q ss_pred CCceeeecC--CCcccccchHHHHHHHHc-----C--CeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECC
Q 005894 493 VTRTSVIST--TESFTTNATNILRDLHSA-----N--ISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEF 563 (671)
Q Consensus 493 ~~~~~v~~~--~~~~~~~~~~~V~~~~~~-----G--l~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~ 563 (671)
+... ++.. ..+.+......++.+.+. | ++|++||||++. ++++++ ++||||||||+
T Consensus 206 i~~h-~wqsDGItnC~~r~~~rl~~ai~~RDs~~~~i~~V~vWTVNd~~-------------~m~~l~-~~GVDGIITD~ 270 (302)
T 3rlg_A 206 ITGH-IWQSDGITNCLPRGLSRVNAAVANRDSANGFINKVYYWTVDKRS-------------TTRDAL-DAGVDGIMTNY 270 (302)
T ss_dssp CCSC-BEEEEECCTTSCCCSHHHHHHHHHHTSTTCCCSEEEEECCCSHH-------------HHHHHH-HTTCSEEEESC
T ss_pred CcCc-EEecCCcccceeccHHHHHHHHHhccCCCCceEEEEEEeCCCHH-------------HHHHHH-HcCCCEEECCC
Confidence 6432 2211 111223333333333222 3 789999999998 899985 99999999999
Q ss_pred hhhHHHHHHhcC
Q 005894 564 PATASKYFRSKC 575 (671)
Q Consensus 564 P~~~~~~~~~~~ 575 (671)
|+.+.+++++..
T Consensus 271 Pd~l~~~l~~~~ 282 (302)
T 3rlg_A 271 PDVITDVLNEAA 282 (302)
T ss_dssp HHHHHHHHTSHH
T ss_pred HHHHHHHHHhcC
Confidence 999999987543
No 33
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=99.85 E-value=9e-23 Score=212.77 Aligned_cols=201 Identities=14% Similarity=0.114 Sum_probs=128.9
Q ss_pred ccCCCeEEEeeceeecCCeEEeecCCc---ccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC
Q 005894 5 NCLSNAIMLCNLQFSKDGLGVCLSDVR---LNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR 81 (671)
Q Consensus 5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~---LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r 81 (671)
...+..+||+|||+ |||++||+||.+ |+||||+ +|+ |.|+ ++||+++++ ++.
T Consensus 24 ~~~Gad~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~~------------------~g~-v~d~-l~eL~~l~~---~~~- 78 (285)
T 1xx1_A 24 LDLGANALEADVTF-KGSVPTYTYHGTPCDFGRDCIR------------------WEY-FNVF-LKTLREYTT---PGN- 78 (285)
T ss_dssp HHHTCSEEEEEEEE-ETTEEEEEECCSSCCTTSCSCC------------------EEE-HHHH-HHHHHHHTS---TTC-
T ss_pred HHhCCCEEEEEEEE-ECCEEEEEcCCcccccccccCC------------------Ccc-HHHH-HHHHHHccc---CCC-
Confidence 34567899999999 999999999999 9999999 898 9999 999999998 222
Q ss_pred CccCCCCCCCCChhhhhHHHHHhcCc---cHHH------HHH-HHHHHcC-C----ce----EEEeCCChHHHHH-hhhh
Q 005894 82 SEAFDNTQPIPTPDTIYDLFYSQHNI---SAAK------YIT-EYLQKLI-S----NV----YYISSPEIGFLKT-MDRK 141 (671)
Q Consensus 82 ~~~f~~~~~IptL~ev~~~~~~~~~~---~~~~------~v~-~~l~~~~-~----~~----~~isSf~~~~L~~-i~~~ 141 (671)
+.|. +.+..++.+.+. .... .+. .++++++ . ++ ++|+||++..|++ +++.
T Consensus 79 -~~~~---------~~L~~l~iEiK~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~ 148 (285)
T 1xx1_A 79 -AKYR---------DGFILFVLDLKTGSLSNDQVRPAGENVAKELLQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEV 148 (285)
T ss_dssp -TTCC---------TTCCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHH
T ss_pred -Cccc---------ccccEEEEecCCCcccccccchhhhhHHHHHHHHHhhccccccccceeEEEEeCCHHHHHHHHHHH
Confidence 3344 211112222221 1111 022 2666665 2 46 8999999999999 9864
Q ss_pred c------CCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCC-----C-CcCCCcHHHH
Q 005894 142 V------DHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKT-----R-YLEPATTLVT 209 (671)
Q Consensus 142 ~------~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~-----~-y~~~~~~~V~ 209 (671)
+ .| ..++.+.+..... ++ .... ..+..++..+.+.. .+|....-. . +......+|+
T Consensus 149 ~~~~~~~~p-~~~~~~l~~~~~~--~~-~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~ 216 (285)
T 1xx1_A 149 LKKEGHEDL-LEKVGYDFSGPYL--PS-LPTL-------DATHEAYKKAGVDG-HIWLSDGLTNFSPLGDMARLKEAIKS 216 (285)
T ss_dssp HHHTTCGGG-GGGEEEEECCCCS--SS-CCCH-------HHHHHHHHHHTCCS-CBEEEECSCCSSHHHHHHHHHHHHHH
T ss_pred hhhccccCc-ccceEEecccccc--cc-hhhH-------HHHHHHHHHhCCCC-ccccccccccccccccHHHHhHHHHH
Confidence 1 55 4788775432210 10 1111 11222222222211 111100000 0 1112357899
Q ss_pred HHHHcCC--eEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894 210 DAHNAGL--QVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI 267 (671)
Q Consensus 210 ~ah~~Gl--~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i 267 (671)
.+|++|+ +|++||||++.. ++++++.| ||||+||+|......+
T Consensus 217 ~~~~~Glg~~V~~WTvn~~~~------------~~~l~~~G---VDgIiTD~P~~~~~~l 261 (285)
T 1xx1_A 217 RDSANGFINKIYYWSVDKVST------------TKAALDVG---VDGIMTNYPNVLIGVL 261 (285)
T ss_dssp HTSTTCCCCEEEEECCCSHHH------------HHHHHHHT---CSEEEESCHHHHHHHH
T ss_pred HHHhcCCCCeEEEeeCCCHHH------------HHHHHhcC---CCEEEeCCHHHHHHHH
Confidence 9999999 999999998854 88999999 9999999999877644
No 34
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=99.39 E-value=3.4e-14 Score=144.95 Aligned_cols=204 Identities=15% Similarity=0.099 Sum_probs=120.5
Q ss_pred cCCCeEEEeeceeecCCeEEeecCCccccc---ccccccccccccccccCCcccccccccccCHHHHccccccccccCCC
Q 005894 6 CLSNAIMLCNLQFSKDGLGVCLSDVRLNNI---TTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRS 82 (671)
Q Consensus 6 ~~~~~~iE~DVqlTkDG~~Vv~HD~~Ldrt---T~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~ 82 (671)
..|.-+||+||++||||++|++||-...+| +.. .-. +.+ .+++|+++.-...
T Consensus 47 ~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~------------------~~~-~~~-~l~~lr~~ttpg~----- 101 (302)
T 3rlg_A 47 NLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCKK------------------YEN-FND-FLKGLRSATTPGN----- 101 (302)
T ss_dssp HTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSCC------------------CCB-HHH-HHHHHHHHHSTTS-----
T ss_pred HcCCCEEEEEEEECCCCCEEEEECCCCcchhccCCC------------------Ccc-HHH-HHHHHHHhcCCCC-----
Confidence 457789999999999999999999855444 332 112 556 8888987664211
Q ss_pred ccCCCCCCCCChhhh-----hHHHHHhcCccHHHHHHHHHHHcC----CceEEEeCCChHHHHHhhh---hcCCCC----
Q 005894 83 EAFDNTQPIPTPDTI-----YDLFYSQHNISAAKYITEYLQKLI----SNVYYISSPEIGFLKTMDR---KVDHNT---- 146 (671)
Q Consensus 83 ~~f~~~~~IptL~ev-----~~~~~~~~~~~~~~~v~~~l~~~~----~~~~~isSf~~~~L~~i~~---~~~~~~---- 146 (671)
++|. ..-+.-.=|+ ....-...|.++++++++.+-..+ ...++||+|+..-++.|++ .+...+
T Consensus 102 ~k~~-~~l~lv~~DlK~~~l~~~~~~~aG~~la~kLl~~~w~~g~~~~ra~vilsi~~~~~~~~l~gf~~~l~~~g~~~L 180 (302)
T 3rlg_A 102 SKYQ-EKLVLVVFDLKTGSLYDNQANDAGKKLAKNLLQHYWNNGNNGGRAYIVLSIPDLNHYPLIKGFKDQLTKDGHPEL 180 (302)
T ss_dssp TTCC-TTCCEEEEEECGGGSCGGGHHHHHHHHHHHHHHHTSGGGSSCCCCEEEEEESCGGGTHHHHHHHHHHHHTTCGGG
T ss_pred Cccc-cceEEEEEEcCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCceeEEEEecCcchHHHHHHHHHHHHhhcCHHHH
Confidence 2333 1111111122 111111347788888888887644 2468899999854444443 221111
Q ss_pred -cceEEEecCCCCcCCCCCCCHHHHhh--cHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHc-----C--C
Q 005894 147 -TKLVFMVLEPNAVEPTTNQTYGSILK--NLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNA-----G--L 216 (671)
Q Consensus 147 -~~~v~~~~~~~~~~~~~~~~y~~~~~--~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~-----G--l 216 (671)
-+..|.|...+. -..+..+.+ +++....+++||..++ + .. ...+++|.+. | +
T Consensus 181 ldkvG~Dfs~n~d-----l~~i~~~~~~~Gi~~h~wqsDGItnC~--~--r~---------~~rl~~ai~~RDs~~~~i~ 242 (302)
T 3rlg_A 181 MDKVGHDFSGNDD-----IGDVGKAYKKAGITGHIWQSDGITNCL--P--RG---------LSRVNAAVANRDSANGFIN 242 (302)
T ss_dssp GGGEEEEECSCCC-----HHHHHHHHHHTTCCSCBEEEEECCTTS--C--CC---------SHHHHHHHHHHTSTTCCCS
T ss_pred hhhcCccccCCCC-----HHHHHHHHHhcCCcCcEEecCCcccce--e--cc---------HHHHHHHHHhccCCCCceE
Confidence 233443332211 112222222 1222334467777664 1 11 3445544444 3 8
Q ss_pred eEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccccC
Q 005894 217 QVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAID 268 (671)
Q Consensus 217 ~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i~ 268 (671)
+|++||||++.. ++++++.| |||||||+|......+.
T Consensus 243 ~V~vWTVNd~~~------------m~~l~~~G---VDGIITD~Pd~l~~~l~ 279 (302)
T 3rlg_A 243 KVYYWTVDKRST------------TRDALDAG---VDGIMTNYPDVITDVLN 279 (302)
T ss_dssp EEEEECCCSHHH------------HHHHHHTT---CSEEEESCHHHHHHHHT
T ss_pred EEEEEeCCCHHH------------HHHHHHcC---CCEEECCCHHHHHHHHH
Confidence 999999999855 89999999 99999999999877543
No 35
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=92.08 E-value=0.084 Score=60.15 Aligned_cols=48 Identities=13% Similarity=0.128 Sum_probs=41.8
Q ss_pred eccCC---CCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894 274 THNGA---SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL 321 (671)
Q Consensus 274 AHRG~---s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L 321 (671)
+|+-+ ....-+.|.++|.+|+..||.+||+|++=-.||.|||+|-.+|
T Consensus 178 sHNTYL~G~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tl 228 (624)
T 1djx_A 178 SHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTF 228 (624)
T ss_dssp ESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTTSC
T ss_pred ccchhhhcCcccCCcCHHHHHHHHHhCCcEEEEEeecCCCCCeEEecCCcc
Confidence 67643 2345689999999999999999999999999999999999887
No 36
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=91.54 E-value=0.11 Score=60.90 Aligned_cols=49 Identities=12% Similarity=0.113 Sum_probs=41.8
Q ss_pred EeccCC---CCCCCchhHHHHHHHHHCCCCeEEeceeEcc--CCeEEEecCCCc
Q 005894 273 ITHNGA---SGVYAGCTDLAYQQAVDDGADIIDCTVQMSK--EGVAFCLESPDL 321 (671)
Q Consensus 273 IAHRG~---s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTk--DGv~Vv~HD~~L 321 (671)
-+|+=+ ....-+.|.++|.+|+..||.+||+|++=-. ||.|||+|-.+|
T Consensus 325 SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~HG~Tl 378 (799)
T 2zkm_X 325 SSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTM 378 (799)
T ss_dssp BBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSS
T ss_pred ccccceeecCcccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEEeCCcc
Confidence 366643 2345689999999999999999999999877 999999999887
No 37
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=90.28 E-value=0.15 Score=59.53 Aligned_cols=49 Identities=14% Similarity=0.159 Sum_probs=41.9
Q ss_pred EeccCC---CCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894 273 ITHNGA---SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL 321 (671)
Q Consensus 273 IAHRG~---s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L 321 (671)
.+|+=+ ....-+.|.++|..|+..||.+||+|++=-.||+|||+|-.+|
T Consensus 336 sshntyL~g~ql~g~ss~~~y~~aL~~gcRcvEld~wdg~~~ePvv~HG~Tl 387 (816)
T 3qr0_A 336 SSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFTM 387 (816)
T ss_dssp BBSSTTBSSCTTTSCBCSHHHHHHHHTTCCEEEEEEECCTTSSCEECCTTSS
T ss_pred ccccchhccccccCcccHHHHHHHHHhCCcEEEEEEecCCCCCceEccCCcc
Confidence 466542 2345688999999999999999999999999999999999887
No 38
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=89.96 E-value=4.4 Score=38.67 Aligned_cols=144 Identities=15% Similarity=0.153 Sum_probs=98.6
Q ss_pred CCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC--C
Q 005894 384 KGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV--P 461 (671)
Q Consensus 384 ~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~--p 461 (671)
...+.+|+++.+.+++... .+++.++.-. |..--+.-++.|.+. +. .. -+.|.....++..|+. .
T Consensus 37 ~g~i~~l~~~v~~lk~~~K-~v~Vh~Dli~------Gls~d~~ai~fL~~~-~~----pd-GIIsTk~~~i~~Ak~~gL~ 103 (192)
T 3kts_A 37 ETHVAQLKALVKYAQAGGK-KVLLHADLVN------GLKNDDYAIDFLCTE-IC----PD-GIISTRGNAIMKAKQHKML 103 (192)
T ss_dssp SEETTTHHHHHHHHHHTTC-EEEEEGGGEE------TCCCSHHHHHHHHHT-TC----CS-EEEESCHHHHHHHHHTTCE
T ss_pred cCcHHHHHHHHHHHHHcCC-eEEEecCchh------ccCCcHHHHHHHHhC-CC----CC-EEEeCcHHHHHHHHHCCCe
Confidence 4679999999999998754 5666666432 222223445666652 22 12 4556789999999988 6
Q ss_pred CceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccchHHHHHHHH-cCCeEEEEec-cCccccccccc
Q 005894 462 AYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHS-ANISVYISAL-RNEYLSIAFDY 539 (671)
Q Consensus 462 ~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~-~Gl~V~vwtv-n~~~~~~~~d~ 539 (671)
.++++|++++ ..++...+......++.-.+.|.. -+++++++++ -+.++.+-++ ++++
T Consensus 104 tIqR~FliDS-------~al~~~~~~i~~~~PD~iEiLPGi------~p~iI~~i~~~~~~PiIaGGlI~~~e------- 163 (192)
T 3kts_A 104 AIQRLFMIDS-------SAYNKGVALIQKVQPDCIELLPGI------IPEQVQKMTQKLHIPVIAGGLIETSE------- 163 (192)
T ss_dssp EEEEEECCSH-------HHHHHHHHHHHHHCCSEEEEECTT------CHHHHHHHHHHHCCCEEEESSCCSHH-------
T ss_pred EEEEEEEEEc-------chHHHHHHHHhhcCCCEEEECCch------hHHHHHHHHHhcCCCEEEECCcCCHH-------
Confidence 7888887753 345555566666777655566642 3578888765 5888888865 5555
Q ss_pred CCChHHHHHHHHhhcCccEEEECChhhH
Q 005894 540 LADPLIEVATFAQGVGVDGITTEFPATA 567 (671)
Q Consensus 540 ~~D~~~e~~~~l~~~GVDgIiTD~P~~~ 567 (671)
++...+ +.|+++|.|-.+...
T Consensus 164 ------dv~~al-~aGA~aVsTs~~~LW 184 (192)
T 3kts_A 164 ------QVNQVI-ASGAIAVTTSNKHLW 184 (192)
T ss_dssp ------HHHHHH-TTTEEEEEECCGGGG
T ss_pred ------HHHHHH-HcCCeEEEeCCHHHh
Confidence 788875 999999999887764
No 39
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=87.78 E-value=0.23 Score=58.43 Aligned_cols=49 Identities=18% Similarity=0.148 Sum_probs=40.4
Q ss_pred EeccCC---CCCCCchhHHHHHHHHHCCCCeEEeceeEc--cCCeEEEecCCCc
Q 005894 273 ITHNGA---SGVYAGCTDLAYQQAVDDGADIIDCTVQMS--KEGVAFCLESPDL 321 (671)
Q Consensus 273 IAHRG~---s~~~PENTl~Af~~Ai~~GaD~IE~DVqlT--kDGv~Vv~HD~~L 321 (671)
-+|+=+ ....-+.|.++|.+|+..||.+||+|++=- .||+|||+|..+|
T Consensus 329 ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v~hg~t~ 382 (885)
T 3ohm_B 329 SSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTM 382 (885)
T ss_dssp CBSSTTBSSCSSEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEECSTTSE
T ss_pred ccccceeccccccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEEeeCCcc
Confidence 356643 223457889999999999999999999965 7899999999987
No 40
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=87.58 E-value=5.7 Score=37.71 Aligned_cols=140 Identities=18% Similarity=0.177 Sum_probs=93.6
Q ss_pred CcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC--CC
Q 005894 385 GKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV--PA 462 (671)
Q Consensus 385 ~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~--p~ 462 (671)
+.+..|+++.+.+++.+ ..+++.++.-. |..--+.-++.|+..+.. -|.|.....+...|+. -.
T Consensus 40 g~I~~L~~iv~~ik~~g-K~vivh~DlI~------GLs~d~~ai~fL~~~~pd-------GIIsTk~~~i~~Akk~GL~t 105 (188)
T 1vkf_A 40 SDILNLKFHLKILKDRG-KTVFVDMDFVN------GLGEGEEAILFVKKAGAD-------GIITIKPKNYVVAKKNGIPA 105 (188)
T ss_dssp EETTTHHHHHHHHHHTT-CEEEEEGGGEE------TCCSSHHHHHHHHHHTCS-------EEEESCHHHHHHHHHTTCCE
T ss_pred CcHHHHHHHHHHHHHCC-CeEEEecCccc------ccCCCHHHHHHHHhcCCC-------EEEcCcHHHHHHHHHcCCEE
Confidence 45778999999998774 36788877532 222112334444444332 4566788999999987 77
Q ss_pred ceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEec-cCcccccccccCC
Q 005894 463 YKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISAL-RNEYLSIAFDYLA 541 (671)
Q Consensus 463 ~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtv-n~~~~~~~~d~~~ 541 (671)
++++|++++ ..++...+......++.-.+.|. ...+++++++ .+.++.+-++ ++++
T Consensus 106 IqR~FliDs-------~al~~~~~~I~~~kPD~iEiLPg-----~v~p~~I~~v--~~~PiIaGGlI~t~e--------- 162 (188)
T 1vkf_A 106 VLRFFALDS-------KAVERGIEQIETLGVDVVEVLPG-----AVAPKVARKI--PGRTVIAAGLVETEE--------- 162 (188)
T ss_dssp EEEEECCSH-------HHHHHHHHHHHHHTCSEEEEESG-----GGHHHHHTTS--TTSEEEEESCCCSHH---------
T ss_pred eeEEEEEEe-------HHHhhhhhhccccCCCeEeecCC-----CchHHHHHHh--cCCCEEEECCcCCHH---------
Confidence 899998864 23444444555566665555553 1136788888 6888888854 5555
Q ss_pred ChHHHHHHHHhhcCccEEEECChhhH
Q 005894 542 DPLIEVATFAQGVGVDGITTEFPATA 567 (671)
Q Consensus 542 D~~~e~~~~l~~~GVDgIiTD~P~~~ 567 (671)
++.+ + +.|+++|.|-.++..
T Consensus 163 ----dv~~-l-~aGA~aIsTs~~~LW 182 (188)
T 1vkf_A 163 ----EARE-I-LKHVSAISTSSRILW 182 (188)
T ss_dssp ----HHHH-H-TTTSSEEEECCHHHH
T ss_pred ----HHHH-H-HCCCeEEEeCCHHHh
Confidence 6777 6 999999999988764
No 41
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=83.94 E-value=2.2 Score=43.87 Aligned_cols=49 Identities=16% Similarity=0.087 Sum_probs=36.9
Q ss_pred ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEcc-CCeEEEecCCCcc
Q 005894 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSK-EGVAFCLESPDLI 322 (671)
Q Consensus 270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTk-DGv~Vv~HD~~L~ 322 (671)
..+-+|+-+... +...+.+|++.|+..||+||+-.. .|.+-|+|...|.
T Consensus 32 T~~g~HNSY~~g----~~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~ 81 (339)
T 3h4x_A 32 TSVGVHNAYEKE----KYRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLG 81 (339)
T ss_dssp EEEEETTTTCTT----TCSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSS
T ss_pred eEeecccccccc----CcccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCccc
Confidence 356678765322 146789999999999999999874 5579999987653
No 42
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=77.74 E-value=12 Score=37.49 Aligned_cols=26 Identities=23% Similarity=0.235 Sum_probs=23.5
Q ss_pred CC--chhHHHHHHHHHCCCCeEEeceeE
Q 005894 282 YA--GCTDLAYQQAVDDGADIIDCTVQM 307 (671)
Q Consensus 282 ~P--ENTl~Af~~Ai~~GaD~IE~DVql 307 (671)
+| |.|....+...+.|||+||+++=.
T Consensus 28 dP~~~~~~~~~~~l~~~GaD~iElgiPf 55 (267)
T 3vnd_A 28 DPSPELSLKIIQTLVDNGADALELGFPF 55 (267)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 56 999999999999999999999865
No 43
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=72.39 E-value=10 Score=38.58 Aligned_cols=152 Identities=11% Similarity=0.076 Sum_probs=80.9
Q ss_pred hHHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHH-HHHhhceecCCCcceeecCCCCCC---cCCCcHH
Q 005894 132 IGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTA-IKSFASGIVVPKSYIIPVNNKTRY---LEPATTL 207 (671)
Q Consensus 132 ~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~-i~~~a~~i~~~~~~i~p~~~~~~y---~~~~~~~ 207 (671)
.+.++....... +..++..+......-+..+ ...+....+. ++.-|+++.+.... .+ ..+ +..-..+
T Consensus 93 ~G~~~~~~~~~~--~~~lil~l~~~t~~~~~~~--~~~l~~~ve~Av~~GAdaV~~~i~~----Gs-~~~~~~l~~i~~v 163 (295)
T 3glc_A 93 RGILRSVVPPAT--NRPVVLRASGANSILAELS--NEAVALSMDDAVRLNSCAVAAQVYI----GS-EYEHQSIKNIIQL 163 (295)
T ss_dssp HHHHHHHSCGGG--CCCEEEECEECCCTTSCTT--CCEECSCHHHHHHTTCSEEEEEECT----TS-TTHHHHHHHHHHH
T ss_pred HhHHhhhccccC--CccEEEEEcCCCcCCCCCc--cchhHHHHHHHHHCCCCEEEEEEEC----CC-CcHHHHHHHHHHH
Confidence 788887765432 4667765433322211111 1111112233 33346776643211 11 111 1112378
Q ss_pred HHHHHHcCCeEEEeeecCCcccCCCCCCChHH---HHHHHhhcCceeeeeEeecCCCc-ccc---ccCCceEEeccCCCC
Q 005894 208 VTDAHNAGLQVYASGFANDIYSSYSYNFEPEA---EYLTFIDNSQFAVDGFITDFPTT-ATE---AIDRPLIITHNGASG 280 (671)
Q Consensus 208 V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~---e~~~~i~~g~~~Vdgv~td~p~~-~~~---~i~~p~iIAHRG~s~ 280 (671)
++.||+.|+.|++|+-..... ..|+.. ..+...+.| +|.|-|.||.. ... ....|.+ +=-|.+.
T Consensus 164 ~~~a~~~GlpvIie~~~G~~~-----~~d~e~i~~aariA~elG---AD~VKt~~t~e~~~~vv~~~~vPVv-~~GG~~~ 234 (295)
T 3glc_A 164 VDAGMKVGMPTMAVTGVGKDM-----VRDQRYFSLATRIAAEMG---AQIIKTYYVEKGFERIVAGCPVPIV-IAGGKKL 234 (295)
T ss_dssp HHHHHTTTCCEEEEECC---------CCSHHHHHHHHHHHHHTT---CSEEEEECCTTTHHHHHHTCSSCEE-EECCSCC
T ss_pred HHHHHHcCCEEEEECCCCCcc-----CCCHHHHHHHHHHHHHhC---CCEEEeCCCHHHHHHHHHhCCCcEE-EEECCCC
Confidence 899999999999998432211 234431 344555678 99999999832 222 2335654 4333333
Q ss_pred CCCchhHHHHHHHHHCCCCeEE
Q 005894 281 VYAGCTDLAYQQAVDDGADIID 302 (671)
Q Consensus 281 ~~PENTl~Af~~Ai~~GaD~IE 302 (671)
-++-.+...+.|++.||+++=
T Consensus 235 -~~~~~l~~v~~ai~aGA~Gv~ 255 (295)
T 3glc_A 235 -PEREALEMCWQAIDQGASGVD 255 (295)
T ss_dssp -CHHHHHHHHHHHHHTTCSEEE
T ss_pred -CHHHHHHHHHHHHHhCCeEEE
Confidence 356778888899999997553
No 44
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=67.36 E-value=6.3 Score=40.24 Aligned_cols=93 Identities=14% Similarity=0.145 Sum_probs=60.0
Q ss_pred cHHHHHHHHcCCeEEEeeecCCc-ccCCCCCCChHHH---HHHHhhcCceeee----eEeecCCCccccc---cCCceEE
Q 005894 205 TTLVTDAHNAGLQVYASGFANDI-YSSYSYNFEPEAE---YLTFIDNSQFAVD----GFITDFPTTATEA---IDRPLII 273 (671)
Q Consensus 205 ~~~V~~ah~~Gl~V~~wtv~~~~-~~~~~~~~d~~~e---~~~~i~~g~~~Vd----gv~td~p~~~~~~---i~~p~iI 273 (671)
..++++||+.|+.+.+|.|--.+ .....-..||..- .+-..+.| .| .|-+.||+..... ...|.++
T Consensus 166 a~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELG---ADs~~tivK~~y~e~f~~Vv~a~~vPVVi 242 (307)
T 3fok_A 166 AHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLG---NDSSYTWMKLPVVEEMERVMESTTMPTLL 242 (307)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCS---SCCSSEEEEEECCTTHHHHGGGCSSCEEE
T ss_pred HHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhC---CCcCCCEEEeCCcHHHHHHHHhCCCCEEE
Confidence 47889999999999998542111 0000012344222 22334456 99 9999999655443 3478888
Q ss_pred eccCCC-CCCCchhHHHHHHHHH-CCCCeEE
Q 005894 274 THNGAS-GVYAGCTDLAYQQAVD-DGADIID 302 (671)
Q Consensus 274 AHRG~s-~~~PENTl~Af~~Ai~-~GaD~IE 302 (671)
+ |+. ..-+|-++.-.+.|++ .||.++-
T Consensus 243 a--GG~k~~~~~e~L~~v~~A~~~aGa~Gv~ 271 (307)
T 3fok_A 243 L--GGEGGNDPDATFASWEHALTLPGVRGLT 271 (307)
T ss_dssp E--CCSCC--CHHHHHHHHHHTTSTTEEEEE
T ss_pred e--CCCCCCCHHHHHHHHHHHHHhCCCeEEe
Confidence 8 544 3468999999999999 7987764
No 45
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=58.95 E-value=69 Score=33.77 Aligned_cols=20 Identities=10% Similarity=-0.046 Sum_probs=17.2
Q ss_pred cHHHHHHHHcCCeEEEeeec
Q 005894 205 TTLVTDAHNAGLQVYASGFA 224 (671)
Q Consensus 205 ~~~V~~ah~~Gl~V~~wtv~ 224 (671)
..+++.+-+.|.+|...|=-
T Consensus 239 ~~LL~~~a~~gkPVilk~G~ 258 (385)
T 3nvt_A 239 FELLKAAGRVDKPILLKRGL 258 (385)
T ss_dssp HHHHHHHHTSSSCEEEECCT
T ss_pred HHHHHHHHccCCcEEEecCC
Confidence 58999999999999998754
No 46
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=58.09 E-value=20 Score=35.56 Aligned_cols=95 Identities=12% Similarity=0.042 Sum_probs=57.5
Q ss_pred cHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHH-HHHhhcCceeeeeEeecCCCcccc------ccCCceEEeccC
Q 005894 205 TTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEY-LTFIDNSQFAVDGFITDFPTTATE------AIDRPLIITHNG 277 (671)
Q Consensus 205 ~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~-~~~i~~g~~~Vdgv~td~p~~~~~------~i~~p~iIAHRG 277 (671)
..+++.+|+.|++|.+++..+.....-..+.+...+. +...+.| +|.|.+.++..... ..+.| +++|-|
T Consensus 135 ~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~G---ad~i~~~~~~~~~~l~~i~~~~~ip-vva~GG 210 (273)
T 2qjg_A 135 GMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELG---ADIVKTSYTGDIDSFRDVVKGCPAP-VVVAGG 210 (273)
T ss_dssp HHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTT---CSEEEECCCSSHHHHHHHHHHCSSC-EEEECC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcC---CCEEEECCCCCHHHHHHHHHhCCCC-EEEEeC
Confidence 4678899999999999864221110000111222344 6677788 99988886532211 12234 677877
Q ss_pred CCCCCCchhHHHHHHHHHCCCCeEEe
Q 005894 278 ASGVYAGCTDLAYQQAVDDGADIIDC 303 (671)
Q Consensus 278 ~s~~~PENTl~Af~~Ai~~GaD~IE~ 303 (671)
-+..-+|.-+..+..+++.||+++=+
T Consensus 211 i~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 211 PKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp SCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 66443555666688888999987644
No 47
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=55.92 E-value=21 Score=36.52 Aligned_cols=90 Identities=17% Similarity=0.156 Sum_probs=59.1
Q ss_pred cHHHHHHHHcCCeEEEeeecCCcccCCCCCCCh---HHH-HHHHhhcCceeeeeEeecCCCc-------ccc---c----
Q 005894 205 TTLVTDAHNAGLQVYASGFANDIYSSYSYNFEP---EAE-YLTFIDNSQFAVDGFITDFPTT-------ATE---A---- 266 (671)
Q Consensus 205 ~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~---~~e-~~~~i~~g~~~Vdgv~td~p~~-------~~~---~---- 266 (671)
..+++.+|+.|+++.+|.+....... -..+| ..+ ++.+.+.| +|-+-+.+|.. ... .
T Consensus 145 ~~v~~~~~~~G~p~lv~~~~~g~~v~--~~~~~~~~v~~aa~~a~~lG---aD~iKv~~~~~~~g~~~~~~~vv~~~~~~ 219 (304)
T 1to3_A 145 KEFNELCHSNGLLSIIEPVVRPPRCG--DKFDREQAIIDAAKELGDSG---ADLYKVEMPLYGKGARSDLLTASQRLNGH 219 (304)
T ss_dssp HHHHHHHHTTTCEEEEEEEECCCSSC--SCCCHHHHHHHHHHHHTTSS---CSEEEECCGGGGCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCcEEEEEECCCCccc--cCCChhHHHHHHHHHHHHcC---CCEEEeCCCcCCCCCHHHHHHHHHhcccc
Confidence 47889999999999999876443211 12345 444 66777777 99988888721 111 1
Q ss_pred cCCceEEeccCCCCCCCchhHHHHHHHHHCCCCeEE
Q 005894 267 IDRPLIITHNGASGVYAGCTDLAYQQAVDDGADIID 302 (671)
Q Consensus 267 i~~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE 302 (671)
...|.|+.=.|. -+|..+..++.|++.|++++=
T Consensus 220 ~~~P~Vv~aGG~---~~~~~~~~~~~a~~aGa~Gv~ 252 (304)
T 1to3_A 220 INMPWVILSSGV---DEKLFPRAVRVAMEAGASGFL 252 (304)
T ss_dssp CCSCEEECCTTS---CTTTHHHHHHHHHHTTCCEEE
T ss_pred CCCCeEEEecCC---CHHHHHHHHHHHHHcCCeEEE
Confidence 235634443443 467778889999999997654
No 48
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=53.55 E-value=1.8e+02 Score=28.90 Aligned_cols=25 Identities=20% Similarity=0.271 Sum_probs=21.8
Q ss_pred CchhHHHHHHHHHCCCCeEEeceeE
Q 005894 283 AGCTDLAYQQAVDDGADIIDCTVQM 307 (671)
Q Consensus 283 PENTl~Af~~Ai~~GaD~IE~DVql 307 (671)
+|.|....+...+.|||+||+-+=.
T Consensus 33 ~~~~~~~~~~l~~~GaD~iElGiPf 57 (271)
T 3nav_A 33 PEQSLAIMQTLIDAGADALELGMPF 57 (271)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCC
Confidence 4889998888889999999998765
No 49
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=50.42 E-value=1.4e+02 Score=29.52 Aligned_cols=92 Identities=11% Similarity=0.063 Sum_probs=52.0
Q ss_pred ccHHHHHHHHHHHcCCceEEEeCCC------------hHHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcH
Q 005894 107 ISAAKYITEYLQKLISNVYYISSPE------------IGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNL 174 (671)
Q Consensus 107 ~~~~~~v~~~l~~~~~~~~~isSf~------------~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l 174 (671)
.+....+++.+++.+-+.+..++|. .+-++.+++.......+++-.+++. ..+
T Consensus 36 ~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d~---------------~~~ 100 (262)
T 1zco_A 36 REQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMDT---------------RHV 100 (262)
T ss_dssp HHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCCG---------------GGH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCCH---------------HhH
Confidence 4455556777777776677788877 4445555543321124443322222 134
Q ss_pred HHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeec
Q 005894 175 TAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFA 224 (671)
Q Consensus 175 ~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~ 224 (671)
.++..+++.+-++...+ . ...+++.+-+.|++|...+=-
T Consensus 101 ~~l~~~vd~~kIga~~~---~--------n~~ll~~~a~~~kPV~lk~G~ 139 (262)
T 1zco_A 101 ELVAKYSDILQIGARNS---Q--------NFELLKEVGKVENPVLLKRGM 139 (262)
T ss_dssp HHHHHHCSEEEECGGGT---T--------CHHHHHHHTTSSSCEEEECCT
T ss_pred HHHHhhCCEEEECcccc---c--------CHHHHHHHHhcCCcEEEecCC
Confidence 55555566655544333 1 246788888899999886543
No 50
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=50.35 E-value=1.8e+02 Score=27.98 Aligned_cols=146 Identities=11% Similarity=0.111 Sum_probs=79.1
Q ss_pred HHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcCCCceEEEEe
Q 005894 390 LDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHI 469 (671)
Q Consensus 390 LeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~p~~~~~~l~ 469 (671)
++++.+.+..++ ++.+......-. +-+.......+.+...+.|.. -+-+. +.+.++.+|+..+.|+.-+.
T Consensus 7 ~~~~~~~~~~~~--~livscq~~~~~-pl~~~~~~~~~A~a~~~~Ga~-----~i~~~--~~~~i~~ir~~v~~Pvig~~ 76 (229)
T 3q58_A 7 LARLEQSVHENG--GLIVSCQPVPGS-PMDKPEIVAAMAQAAASAGAV-----AVRIE--GIENLRTVRPHLSVPIIGII 76 (229)
T ss_dssp HHHHHHHHHHHC--CEEEECCCCTTS-TTCSHHHHHHHHHHHHHTTCS-----EEEEE--SHHHHHHHGGGCCSCEEEEC
T ss_pred HHHHHHHhhhcC--CEEEEEeCCCCC-CCCCcchHHHHHHHHHHCCCc-----EEEEC--CHHHHHHHHHhcCCCEEEEE
Confidence 566666662221 466666532210 011223556777778888765 34444 57889999988677764333
Q ss_pred ecccCC---CChhHHHHHHHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHH
Q 005894 470 RKEVSA---APREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIE 546 (671)
Q Consensus 470 ~~~~~d---~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e 546 (671)
...+.+ +-...++++.. +...|.+.-.+......-.....++++.+|+.|+.+.+-. .+.+ +
T Consensus 77 k~~~~~~~~~I~~~~~~i~~-~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v-~t~e-------------e 141 (229)
T 3q58_A 77 KRDLTGSPVRITPYLQDVDA-LAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADC-STVN-------------E 141 (229)
T ss_dssp BCCCSSCCCCBSCSHHHHHH-HHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEEC-SSHH-------------H
T ss_pred eecCCCCceEeCccHHHHHH-HHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEec-CCHH-------------H
Confidence 222111 11122334433 2334553322211100000123579999999999998854 4443 6
Q ss_pred HHHHHhhcCccEEEE
Q 005894 547 VATFAQGVGVDGITT 561 (671)
Q Consensus 547 ~~~~l~~~GVDgIiT 561 (671)
..++ .+.|+|.|.+
T Consensus 142 a~~a-~~~Gad~Ig~ 155 (229)
T 3q58_A 142 GISC-HQKGIEFIGT 155 (229)
T ss_dssp HHHH-HHTTCSEEEC
T ss_pred HHHH-HhCCCCEEEe
Confidence 7777 4999999986
No 51
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=49.50 E-value=35 Score=38.50 Aligned_cols=83 Identities=13% Similarity=0.143 Sum_probs=56.0
Q ss_pred CChhHHHHHHHHHHHhcCCceeeecCCCc-----c-----cccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHH
Q 005894 476 APREVVEEIKKYASAVTVTRTSVISTTES-----F-----TTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLI 545 (671)
Q Consensus 476 ~~~~~l~~i~~~a~~v~~~~~~v~~~~~~-----~-----~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~ 545 (671)
++.+..+...+||...|.++..+-..|.. + ...-+++++.+|++|+.++.|.--.. |..+-+.
T Consensus 306 ~n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i~lw~~~~~-------~~~~~~~ 378 (641)
T 3a24_A 306 VNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHA-------FERDMEN 378 (641)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEEEEEEEHHH-------HHTSHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEEEEEeeCcc-------hHHHHHH
Confidence 34556677778888888865544332211 1 01236899999999999999976543 2334444
Q ss_pred HHHHHHhhcCccEEEECChhh
Q 005894 546 EVATFAQGVGVDGITTEFPAT 566 (671)
Q Consensus 546 e~~~~l~~~GVDgIiTD~P~~ 566 (671)
.+..+ .++||+||=+||...
T Consensus 379 ~~~~~-~~~Gv~gvK~Df~~~ 398 (641)
T 3a24_A 379 VCRHY-AEMGVKGFKVDFMDR 398 (641)
T ss_dssp HHHHH-HHHTCCEEEEECCCC
T ss_pred HHHHH-HHcCCCEEEECCCCC
Confidence 56665 799999999999764
No 52
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=47.21 E-value=16 Score=41.17 Aligned_cols=89 Identities=15% Similarity=0.102 Sum_probs=58.6
Q ss_pred cHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccccCCceEEeccCCCCCCCc
Q 005894 205 TTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAG 284 (671)
Q Consensus 205 ~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i~~p~iIAHRG~s~~~PE 284 (671)
.++++-||+.|++++.|.--.. |..+...++..+-++| |+||-+||-.... .
T Consensus 350 ~~l~~Ya~~kgV~i~lw~~~~~------~~~~~~~~~~~~~~~G---v~gvK~Df~~~~~-------------------Q 401 (641)
T 3a24_A 350 KELVDYAASKNVGIILWAGYHA------FERDMENVCRHYAEMG---VKGFKVDFMDRDD-------------------Q 401 (641)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHH------HHTSHHHHHHHHHHHT---CCEEEEECCCCCS-------------------H
T ss_pred HHHHHHHHhcCCEEEEEeeCcc------hHHHHHHHHHHHHHcC---CCEEEECCCCCCc-------------------H
Confidence 5899999999999999987653 2333456778888888 9999999973211 2
Q ss_pred hhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccc
Q 005894 285 CTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMS 333 (671)
Q Consensus 285 NTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~ 333 (671)
-++.-|+..++.-| +=+..|.+|.... -|+-.+.+|+
T Consensus 402 ~~v~~y~~i~~~aA----------~~~l~V~fHg~~~--P~Gl~RTyPN 438 (641)
T 3a24_A 402 EMTAFNYRAAEMCA----------KYKLILDLHGTHK--PAGLNRTYPN 438 (641)
T ss_dssp HHHHHHHHHHHHHH----------HTTCEEEECSCCC--CTTHHHHCTT
T ss_pred HHHHHHHHHHHHHH----------HcCCEEEcCCCcC--CCcccccccc
Confidence 33444444444322 3346799998865 3343344444
No 53
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=46.94 E-value=37 Score=32.06 Aligned_cols=57 Identities=18% Similarity=0.099 Sum_probs=41.8
Q ss_pred chHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHh
Q 005894 509 ATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRS 573 (671)
Q Consensus 509 ~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~ 573 (671)
-++.|+.+|++|+.|++..-.-+. ...|.. .-.|+...++|||||=.+..+...++.
T Consensus 45 L~~iv~~ik~~gK~vivh~DlI~G------Ls~d~~--ai~fL~~~~pdGIIsTk~~~i~~Akk~ 101 (188)
T 1vkf_A 45 LKFHLKILKDRGKTVFVDMDFVNG------LGEGEE--AILFVKKAGADGIITIKPKNYVVAKKN 101 (188)
T ss_dssp HHHHHHHHHHTTCEEEEEGGGEET------CCSSHH--HHHHHHHHTCSEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCeEEEecCcccc------cCCCHH--HHHHHHhcCCCEEEcCcHHHHHHHHHc
Confidence 357999999999999998544332 233332 333446789999999999999988765
No 54
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=44.07 E-value=60 Score=30.76 Aligned_cols=58 Identities=14% Similarity=0.115 Sum_probs=40.7
Q ss_pred chHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHh-hcCccEEEECChhhHHHHHHhc
Q 005894 509 ATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQ-GVGVDGITTEFPATASKYFRSK 574 (671)
Q Consensus 509 ~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~-~~GVDgIiTD~P~~~~~~~~~~ 574 (671)
-++.|+++|++|..+++. ++.-. .+..|.. .+ .|+. ..++|||||=.+..+...++..
T Consensus 43 l~~~v~~lk~~~K~v~Vh-~Dli~-----Gls~d~~-ai-~fL~~~~~pdGIIsTk~~~i~~Ak~~g 101 (192)
T 3kts_A 43 LKALVKYAQAGGKKVLLH-ADLVN-----GLKNDDY-AI-DFLCTEICPDGIISTRGNAIMKAKQHK 101 (192)
T ss_dssp HHHHHHHHHHTTCEEEEE-GGGEE-----TCCCSHH-HH-HHHHHTTCCSEEEESCHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCeEEEe-cCchh-----ccCCcHH-HH-HHHHhCCCCCEEEeCcHHHHHHHHHCC
Confidence 357899999999999984 33322 3344444 23 3333 4699999999999999887653
No 55
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=43.45 E-value=44 Score=38.22 Aligned_cols=85 Identities=14% Similarity=0.114 Sum_probs=55.5
Q ss_pred CChhHHHHHHHHHHHhcCCceee---ecCCCc-----------cc-----ccchHHHHHHHHcCCeEEEEeccCcccccc
Q 005894 476 APREVVEEIKKYASAVTVTRTSV---ISTTES-----------FT-----TNATNILRDLHSANISVYISALRNEYLSIA 536 (671)
Q Consensus 476 ~~~~~l~~i~~~a~~v~~~~~~v---~~~~~~-----------~~-----~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~ 536 (671)
++.+..+...+||...|.++..| -..|.. |. ..-+++++.+++.|..++.|.--....
T Consensus 368 ~nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw~~t~~~~--- 444 (738)
T 2d73_A 368 ANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASV--- 444 (738)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEEEECTTBH---
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEEEcCCCch---
Confidence 34556677778898888876555 222211 00 013689999999999999998766521
Q ss_pred cccCCChHHHHHHHHhhcCccEEEECCh
Q 005894 537 FDYLADPLIEVATFAQGVGVDGITTEFP 564 (671)
Q Consensus 537 ~d~~~D~~~e~~~~l~~~GVDgIiTD~P 564 (671)
-+|..+-...+..+ .++||.||=+||.
T Consensus 445 ~n~e~~~d~~f~~~-~~~Gv~GVKvdF~ 471 (738)
T 2d73_A 445 RNYERHMDKAYQFM-ADNGYNSVKSGYV 471 (738)
T ss_dssp HHHHHHHHHHHHHH-HHTTCCEEEEECC
T ss_pred hhHHHHHHHHHHHH-HHcCCCEEEeCcc
Confidence 11222233355555 7999999999999
No 56
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=41.17 E-value=61 Score=32.12 Aligned_cols=94 Identities=13% Similarity=0.073 Sum_probs=56.1
Q ss_pred cHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHH-HHHHhhcCceeeeeEeecCCCccc------cccCC-ceEEecc
Q 005894 205 TTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAE-YLTFIDNSQFAVDGFITDFPTTAT------EAIDR-PLIITHN 276 (671)
Q Consensus 205 ~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e-~~~~i~~g~~~Vdgv~td~p~~~~------~~i~~-p~iIAHR 276 (671)
..+++.+|+.|+++..|...+.....-.++.+-..+ .+...+.| +|.|-|-||.... ..... | |++=-
T Consensus 128 ~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~G---AD~vkt~~~~~~e~~~~~~~~~~~~p-V~asG 203 (263)
T 1w8s_A 128 ARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELG---ADAMKIKYTGDPKTFSWAVKVAGKVP-VLMSG 203 (263)
T ss_dssp HHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHT---CSEEEEECCSSHHHHHHHHHHTTTSC-EEEEC
T ss_pred HHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcC---CCEEEEcCCCCHHHHHHHHHhCCCCe-EEEEe
Confidence 467788899999999996553221111111122222 24556678 9999999873221 12345 6 55555
Q ss_pred CCCCCCCchhHHHHHHHHHCCCCeEE
Q 005894 277 GASGVYAGCTDLAYQQAVDDGADIID 302 (671)
Q Consensus 277 G~s~~~PENTl~Af~~Ai~~GaD~IE 302 (671)
|-+..-+|-.+.-...+++.||+++=
T Consensus 204 Gi~~~~~~~~l~~i~~~~~aGA~Gvs 229 (263)
T 1w8s_A 204 GPKTKTEEDFLKQVEGVLEAGALGIA 229 (263)
T ss_dssp CSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 65533456666677778899997653
No 57
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=40.53 E-value=2.1e+02 Score=27.74 Aligned_cols=130 Identities=16% Similarity=0.137 Sum_probs=76.8
Q ss_pred HHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChH---HHHHHhcC-CCceE
Q 005894 390 LDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSS---VLSKFQDV-PAYKK 465 (671)
Q Consensus 390 LeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~---~L~~lk~~-p~~~~ 465 (671)
..++++.+.+. ++.--|..... +-...+.+.+-+.|.. -+-+..-++. .++.+++. |+..+
T Consensus 24 m~~~~~~l~~~---~vv~Vir~~~~-------~~a~~~a~al~~gGi~-----~iEvt~~t~~a~e~I~~l~~~~~~~~i 88 (232)
T 4e38_A 24 MSTINNQLKAL---KVIPVIAIDNA-------EDIIPLGKVLAENGLP-----AAEITFRSDAAVEAIRLLRQAQPEMLI 88 (232)
T ss_dssp HHHHHHHHHHH---CEEEEECCSSG-------GGHHHHHHHHHHTTCC-----EEEEETTSTTHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHhC---CEEEEEEcCCH-------HHHHHHHHHHHHCCCC-----EEEEeCCCCCHHHHHHHHHHhCCCCEE
Confidence 34677777765 45555554332 3345677777788875 4444433444 45556665 77554
Q ss_pred EEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHH
Q 005894 466 VLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLI 545 (671)
Q Consensus 466 ~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~ 545 (671)
+.- .+ ++.+..+. |-..|. +.++.. ..++++++.+++.|+.+..-. .+..
T Consensus 89 GaG---TV--lt~~~a~~----Ai~AGA--~fIvsP-----~~~~~vi~~~~~~gi~~ipGv-~Tpt------------- 138 (232)
T 4e38_A 89 GAG---TI--LNGEQALA----AKEAGA--TFVVSP-----GFNPNTVRACQEIGIDIVPGV-NNPS------------- 138 (232)
T ss_dssp EEE---CC--CSHHHHHH----HHHHTC--SEEECS-----SCCHHHHHHHHHHTCEEECEE-CSHH-------------
T ss_pred eEC---Cc--CCHHHHHH----HHHcCC--CEEEeC-----CCCHHHHHHHHHcCCCEEcCC-CCHH-------------
Confidence 432 22 22222222 223343 333321 135789999999999998854 4554
Q ss_pred HHHHHHhhcCccEEEECChhh
Q 005894 546 EVATFAQGVGVDGITTEFPAT 566 (671)
Q Consensus 546 e~~~~l~~~GVDgIiTD~P~~ 566 (671)
|+.+.+ ++|+|.|-. ||..
T Consensus 139 Ei~~A~-~~Gad~vK~-FPa~ 157 (232)
T 4e38_A 139 TVEAAL-EMGLTTLKF-FPAE 157 (232)
T ss_dssp HHHHHH-HTTCCEEEE-CSTT
T ss_pred HHHHHH-HcCCCEEEE-CcCc
Confidence 788885 999999988 8853
No 58
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=40.22 E-value=85 Score=30.45 Aligned_cols=108 Identities=9% Similarity=0.126 Sum_probs=0.0
Q ss_pred CCChHHHHHhh---hhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCc--C
Q 005894 129 SPEIGFLKTMD---RKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYL--E 202 (671)
Q Consensus 129 Sf~~~~L~~i~---~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~--~ 202 (671)
+++.++++.++ +.. .+++.-.+-....-.--+...+..+...+..++.. ++|+....- ++ ++-+ .
T Consensus 37 TPS~g~i~~~~~~~~~~---~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~L-----t~-dg~iD~~ 107 (224)
T 2bdq_A 37 TPSYGVIKEANQYLHEK---GISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGIL-----TS-NNHIDTE 107 (224)
T ss_dssp CCCHHHHHHHHHHHHHT---TCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCB-----CT-TSSBCHH
T ss_pred CCCHHHHHHHHHhhhhc---CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeE-----CC-CCCcCHH
Q ss_pred CCcHHHHHHHHcCCeEEEeeecCCcccCCCCC--CChHHHHHHHhhcCceeeeeEee
Q 005894 203 PATTLVTDAHNAGLQVYASGFANDIYSSYSYN--FEPEAEYLTFIDNSQFAVDGFIT 257 (671)
Q Consensus 203 ~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~--~d~~~e~~~~i~~g~~~Vdgv~t 257 (671)
....+++.|+ |++ |||....+ .. .||...+.++++.| |+.|+|
T Consensus 108 ~~~~Li~~a~--~~~---vTFHRAFD----~~~~~d~~~ale~L~~lG---v~rILT 152 (224)
T 2bdq_A 108 AIEQLLPATQ--GLP---LVFHMAFD----VIPKSDQKKSIDQLVALG---FTRILL 152 (224)
T ss_dssp HHHHHHHHHT--TCC---EEECGGGG----GSCTTTHHHHHHHHHHTT---CCEEEE
T ss_pred HHHHHHHHhC--CCe---EEEECchh----ccCCcCHHHHHHHHHHcC---CCEEEC
No 59
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=39.15 E-value=2.7e+02 Score=26.76 Aligned_cols=146 Identities=13% Similarity=0.128 Sum_probs=78.4
Q ss_pred HHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcCCCceEEEEe
Q 005894 390 LDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHI 469 (671)
Q Consensus 390 LeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~p~~~~~~l~ 469 (671)
++++++.+..++ ++.+........ +-++......+.+...+.|.. -+.+. +.+.++.+|+..+.|+.-+.
T Consensus 7 ~~~~~~~~~~~~--~livscq~~~~~-pl~~~~~~~~~A~a~~~~Ga~-----~i~~~--~~~~i~~ir~~v~~Pvig~~ 76 (232)
T 3igs_A 7 LEQLDKNIAASG--GLIVSCQPVPGS-PLDKPEIVAAMALAAEQAGAV-----AVRIE--GIDNLRMTRSLVSVPIIGII 76 (232)
T ss_dssp HHHHHHHHHHHC--CEEEECCCCTTC-TTCSHHHHHHHHHHHHHTTCS-----EEEEE--SHHHHHHHHTTCCSCEEEEC
T ss_pred HHHHHHHhhhcC--CEEEEEeCCCCC-CCCCcchHHHHHHHHHHCCCe-----EEEEC--CHHHHHHHHHhcCCCEEEEE
Confidence 455666662221 466666532210 011223556777788888765 34444 57889999988677763222
Q ss_pred ecccCC---CChhHHHHHHHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHH
Q 005894 470 RKEVSA---APREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIE 546 (671)
Q Consensus 470 ~~~~~d---~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e 546 (671)
...+.+ +-...++++.. +...|.+.-.+......-.....++++.+|+.|+.+.+-. .+.+ +
T Consensus 77 k~d~~~~~~~I~~~~~~i~~-~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v-~t~e-------------e 141 (232)
T 3igs_A 77 KRDLDESPVRITPFLDDVDA-LAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADC-SSVD-------------D 141 (232)
T ss_dssp BCCCSSCCCCBSCSHHHHHH-HHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEEC-CSHH-------------H
T ss_pred eecCCCcceEeCccHHHHHH-HHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeC-CCHH-------------H
Confidence 222111 11122334433 2334554322211100000123579999999999988754 4443 6
Q ss_pred HHHHHhhcCccEEEE
Q 005894 547 VATFAQGVGVDGITT 561 (671)
Q Consensus 547 ~~~~l~~~GVDgIiT 561 (671)
..++ .+.|+|.|.+
T Consensus 142 a~~a-~~~Gad~Ig~ 155 (232)
T 3igs_A 142 GLAC-QRLGADIIGT 155 (232)
T ss_dssp HHHH-HHTTCSEEEC
T ss_pred HHHH-HhCCCCEEEE
Confidence 7777 4999999975
No 60
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=38.82 E-value=39 Score=34.03 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=34.0
Q ss_pred HHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894 206 TLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATE 265 (671)
Q Consensus 206 ~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~ 265 (671)
++|+.||+.||.-.++.++-+. .+.+...| .|-|...-|-+...
T Consensus 154 e~I~~A~~~gL~Ti~~v~~~ee-------------A~amA~ag---pDiI~~h~glT~gg 197 (286)
T 2p10_A 154 EMIAEAHKLDLLTTPYVFSPED-------------AVAMAKAG---ADILVCHMGLTTGG 197 (286)
T ss_dssp HHHHHHHHTTCEECCEECSHHH-------------HHHHHHHT---CSEEEEECSCC---
T ss_pred HHHHHHHHCCCeEEEecCCHHH-------------HHHHHHcC---CCEEEECCCCCCCC
Confidence 7899999999999998887543 55777788 99999998855443
No 61
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=38.30 E-value=81 Score=31.23 Aligned_cols=117 Identities=13% Similarity=0.263 Sum_probs=68.4
Q ss_pred cCCceEEEeC--------CChHHHHHhhhhcCCCCcceEEEecCCCCcCC-CCCCCHHHHhhcHHHHHHh-hceecCCCc
Q 005894 120 LISNVYYISS--------PEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEP-TTNQTYGSILKNLTAIKSF-ASGIVVPKS 189 (671)
Q Consensus 120 ~~~~~~~isS--------f~~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~-~~~~~y~~~~~~l~~i~~~-a~~i~~~~~ 189 (671)
.|-+++=++| ++.++++.+++..+ +++. .++.+..... -+...+..+...+..++.. ++|+.+.
T Consensus 20 ~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~---ipv~-vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G-- 93 (256)
T 1twd_A 20 NGADRVELCAAPKEGGLTPSLGVLKSVRQRVT---IPVH-PIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTG-- 93 (256)
T ss_dssp TTCSEEEECBCGGGTCBCCCHHHHHHHHHHCC---SCEE-EBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEEC--
T ss_pred cCCCEEEEcCCcccCCCCCCHHHHHHHHHHcC---CceE-EEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEe--
Confidence 3445666554 88999999987552 5543 3444432211 1112233344455555554 7776543
Q ss_pred ceeecCCCCCCcC--CCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeec
Q 005894 190 YIIPVNNKTRYLE--PATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITD 258 (671)
Q Consensus 190 ~i~p~~~~~~y~~--~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td 258 (671)
.+ ++ ++-+. ....+++.|+ |++ |||....+ ...||...+.++++.| |+.|+|-
T Consensus 94 ~L---t~-dg~iD~~~~~~Li~~a~--~~~---vTFHRAfD----~~~d~~~ale~L~~lG---~~rILTS 148 (256)
T 1twd_A 94 VL---DV-DGNVDMPRMEKIMAAAG--PLA---VTFHRAFD----MCANPLYTLNNLAELG---IARVLTS 148 (256)
T ss_dssp CB---CT-TSSBCHHHHHHHHHHHT--TSE---EEECGGGG----GCSCHHHHHHHHHHHT---CCEEEEC
T ss_pred eE---CC-CCCcCHHHHHHHHHHhC--CCc---EEEECchh----ccCCHHHHHHHHHHcC---CCEEECC
Confidence 22 22 23221 1235666554 654 89976533 4578999999999999 9999984
No 62
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=37.85 E-value=74 Score=27.32 Aligned_cols=39 Identities=13% Similarity=0.229 Sum_probs=27.8
Q ss_pred hHHHHHHHHc-------CCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEE
Q 005894 510 TNILRDLHSA-------NISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITT 561 (671)
Q Consensus 510 ~~~V~~~~~~-------Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiT 561 (671)
+++++.++++ |+.+|+|--++-+ .-+.++ .+..+||+++
T Consensus 47 ~e~v~~~REAiLDNIDlG~el~~WKp~eVd------------km~~k~-~q~~~dGl~i 92 (126)
T 2rbg_A 47 QELVTLIREALLENIDIGYELFLWKKNEVD------------IFLKNL-EKSEVDGLLV 92 (126)
T ss_dssp HHHHHHTHHHHHHTTTSEEEEEEECGGGHH------------HHHHHH-TTCCCCEEEE
T ss_pred HHHHHHHHHHHHhccccceEEEEeCHHHHH------------HHHHHH-HHhCCCceEE
Confidence 4566666554 8899999877655 134555 5899999987
No 63
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=35.44 E-value=2.7e+02 Score=28.78 Aligned_cols=17 Identities=29% Similarity=0.352 Sum_probs=13.6
Q ss_pred HHHHHHHHHCCCCeEEe
Q 005894 287 DLAYQQAVDDGADIIDC 303 (671)
Q Consensus 287 l~Af~~Ai~~GaD~IE~ 303 (671)
...=..|+.+||++||.
T Consensus 219 ~~~~~AAvAlGA~iIEk 235 (349)
T 2wqp_A 219 NYACLGAVALGGSILER 235 (349)
T ss_dssp SHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhCCCEEEe
Confidence 45667788999999985
No 64
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=34.50 E-value=1.8e+02 Score=30.60 Aligned_cols=161 Identities=11% Similarity=0.080 Sum_probs=94.7
Q ss_pred CcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCc
Q 005894 385 GKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAY 463 (671)
Q Consensus 385 ~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~ 463 (671)
..+-.|.++++++++.+ ..++++|-...+.. . .+.-.-++.+++.|... --+=..|+......+.+. .++
T Consensus 71 ~~~~~~~~l~~~a~~~g-~~vi~DVsp~~~~~--L--g~s~~dl~~f~~lGi~g----LRLD~Gf~~~eia~ls~n~~gl 141 (385)
T 1x7f_A 71 EIVAEFKEIINHAKDNN-MEVILDVAPAVFDQ--L--GISYSDLSFFAELGADG----IRLDVGFDGLTEAKMTNNPYGL 141 (385)
T ss_dssp ---HHHHHHHHHHHHTT-CEEEEEECTTCC----------CCCTHHHHHHTCSE----EEESSCCSSHHHHHHTTCTTCC
T ss_pred HHHHHHHHHHHHHHHCC-CEEEEECCHHHHHH--c--CCCHHHHHHHHHcCCCE----EEEcCCCCHHHHHHHhcCCCCC
Confidence 34566889999999874 36788886554421 1 11112244566767652 112234788888888776 567
Q ss_pred eEEEEeecccCCCChhHHHHHHHHHHHhcCCcee------eecCCCcccccchHH----HHHHHHcCCeEEEEeccCccc
Q 005894 464 KKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTS------VISTTESFTTNATNI----LRDLHSANISVYISALRNEYL 533 (671)
Q Consensus 464 ~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~------v~~~~~~~~~~~~~~----V~~~~~~Gl~V~vwtvn~~~~ 533 (671)
++.+-.... ...++.+.++ +++... .+|.- +...+.++ =+.+|+.|+++.++.-.+...
T Consensus 142 kIeLNASt~-----~~~l~~l~~~----~~n~~~l~acHNFYPr~--~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~~ 210 (385)
T 1x7f_A 142 KIELNVSND-----IAYLENILSH----QANKSALIGCHNFYPQK--FTGLPYDYFIRCSERFKKHGIRSAAFITSHVAN 210 (385)
T ss_dssp EEEEETTSC-----SSHHHHHTTS----SCCGGGEEEECCCBCST--TCSBCHHHHHHHHHHHHHTTCCCEEEECCSSCC
T ss_pred EEEEeCcCC-----HHHHHHHHHc----CCChHHeEEeeccCCCC--CCCCCHHHHHHHHHHHHHCCCcEEEEecCCccc
Confidence 777765431 2334444332 222222 23331 23333333 346899999999999988877
Q ss_pred ccccccC-----------CChHHHHHHHHhhcC-ccEEEECChhh
Q 005894 534 SIAFDYL-----------ADPLIEVATFAQGVG-VDGITTEFPAT 566 (671)
Q Consensus 534 ~~~~d~~-----------~D~~~e~~~~l~~~G-VDgIiTD~P~~ 566 (671)
.-||..+ -.|..++..++ ..| ||.|+-=.+..
T Consensus 211 rGPwpl~eGLPTLE~HR~~~~~~~a~~L~-~~g~iD~ViIGd~~~ 254 (385)
T 1x7f_A 211 IGPWDINDGLCTLEEHRNLPIEVQAKHLW-ATGLIDDVIIGNAYA 254 (385)
T ss_dssp BCSSSCCSCCBSBGGGTTSCHHHHHHHHH-HTTSCCEEEECSBCC
T ss_pred cCCccccCCCCchHHHCCCCHHHHHHHHH-hcCCCCEEEECCCCC
Confidence 7787553 35677888875 678 99998866544
No 65
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=29.09 E-value=30 Score=39.55 Aligned_cols=51 Identities=12% Similarity=0.176 Sum_probs=39.4
Q ss_pred cHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCC
Q 005894 205 TTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFP 260 (671)
Q Consensus 205 ~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p 260 (671)
.++++-||+.|.+|+.|.--.... -||..+...++..+-++| |.||-+||-
T Consensus 421 ~eL~~YA~sKGV~iilw~~t~~~~--~n~e~~~d~~f~~~~~~G---v~GVKvdF~ 471 (738)
T 2d73_A 421 KEIHRYAARKGIKMMMHHETSASV--RNYERHMDKAYQFMADNG---YNSVKSGYV 471 (738)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTBH--HHHHHHHHHHHHHHHHTT---CCEEEEECC
T ss_pred HHHHHHHHhCCCEEEEEEcCCCch--hhHHHHHHHHHHHHHHcC---CCEEEeCcc
Confidence 589999999999999998765411 123333446777888888 999999998
No 66
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=28.63 E-value=2.5e+02 Score=26.05 Aligned_cols=95 Identities=11% Similarity=0.114 Sum_probs=50.7
Q ss_pred CChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEe
Q 005894 449 DDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISA 527 (671)
Q Consensus 449 fd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwt 527 (671)
+-.+.++.+|+. ++.++..-. .+.+ ..+...+.+...|.+.-.++... ....-.++++.+++.|+.+.+-.
T Consensus 39 ~g~~~i~~ir~~~~~~~i~~~~--~~~~----~~~~~~~~~~~~Gad~v~v~~~~--~~~~~~~~~~~~~~~g~~~~v~~ 110 (211)
T 3f4w_A 39 EGVNAIKAIKEKYPHKEVLADA--KIMD----GGHFESQLLFDAGADYVTVLGVT--DVLTIQSCIRAAKEAGKQVVVDM 110 (211)
T ss_dssp HTTHHHHHHHHHCTTSEEEEEE--EECS----CHHHHHHHHHHTTCSEEEEETTS--CHHHHHHHHHHHHHHTCEEEEEC
T ss_pred ccHHHHHHHHHhCCCCEEEEEE--Eecc----chHHHHHHHHhcCCCEEEEeCCC--ChhHHHHHHHHHHHcCCeEEEEe
Confidence 345667777776 776653321 1111 11121223334565443333221 00111568889999999988643
Q ss_pred ccCcccccccccCCChHHHHHHHHhhcCccEEEEC
Q 005894 528 LRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTE 562 (671)
Q Consensus 528 vn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD 562 (671)
.+.. ++..++.++ .+.|+|.|.++
T Consensus 111 ~~~~----------t~~~~~~~~-~~~g~d~i~v~ 134 (211)
T 3f4w_A 111 ICVD----------DLPARVRLL-EEAGADMLAVH 134 (211)
T ss_dssp TTCS----------SHHHHHHHH-HHHTCCEEEEE
T ss_pred cCCC----------CHHHHHHHH-HHcCCCEEEEc
Confidence 3221 233356666 48999999876
No 67
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=27.74 E-value=2.4e+02 Score=28.99 Aligned_cols=53 Identities=11% Similarity=0.011 Sum_probs=35.2
Q ss_pred chHHHHHHHHcCCeEEEEeccCccccccc-c---cCCChHHHHHHHHhhcCccEEEECCh
Q 005894 509 ATNILRDLHSANISVYISALRNEYLSIAF-D---YLADPLIEVATFAQGVGVDGITTEFP 564 (671)
Q Consensus 509 ~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~-d---~~~D~~~e~~~~l~~~GVDgIiTD~P 564 (671)
-+.+++.+|+.|+++.+|.--... .+. . ...-.. +..+.+.++|||+|=.|+-
T Consensus 76 l~~l~~~ih~~Glk~Giw~~~~~~--~~~~~~pg~~~~~~-~~~~~~~~wGvdyvK~D~~ 132 (362)
T 1uas_A 76 IKALADYVHAKGLKLGIYSDAGSQ--TCSNKMPGSLDHEE-QDVKTFASWGVDYLKYDNC 132 (362)
T ss_dssp HHHHHHHHHHTTCEEEEEEESSSB--CTTSSSBCCTTCHH-HHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHCCCEeEEEeeCCCc--cccCCCCCchhHHH-HHHHHHHHcCCCEEEECcc
Confidence 467899999999999999764432 111 0 111122 3444557999999999984
No 68
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=26.85 E-value=1.9e+02 Score=29.77 Aligned_cols=93 Identities=17% Similarity=0.215 Sum_probs=58.7
Q ss_pred cHHHHHHHHcCCeEEEeeecCCcccCCCCC--C---C---hHHHHHHH--hhcCceeeeeEeecCCCccc----------
Q 005894 205 TTLVTDAHNAGLQVYASGFANDIYSSYSYN--F---E---PEAEYLTF--IDNSQFAVDGFITDFPTTAT---------- 264 (671)
Q Consensus 205 ~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~--~---d---~~~e~~~~--i~~g~~~Vdgv~td~p~~~~---------- 264 (671)
..+.+++++.|+++.++-+--+....-+.+ + + ....++.+ ...| +|.+-+.||....
T Consensus 150 ~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~elG---aDv~Kve~p~~~~~v~g~~~~~~ 226 (332)
T 3iv3_A 150 ERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERFG---IDVLKVEVPVNMVYVEGFAEGEV 226 (332)
T ss_dssp HHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGGC---CSEEEECCSSCGGGBTTTCSSCC
T ss_pred HHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCcC---CcEEEEecCCChhhhcccccccc
Confidence 367789999999999976553221100000 0 1 12233444 3445 9999999998652
Q ss_pred ---------------cccCCceEEeccCCCCCCCchhHHHHHHHHHCCC--CeEEe
Q 005894 265 ---------------EAIDRPLIITHNGASGVYAGCTDLAYQQAVDDGA--DIIDC 303 (671)
Q Consensus 265 ---------------~~i~~p~iIAHRG~s~~~PENTl~Af~~Ai~~Ga--D~IE~ 303 (671)
.+...|.|+-=.|.+ .+--+...+.|++.|| .+|=|
T Consensus 227 ~y~~~ea~~~f~~~~~a~~~P~v~lsgG~~---~~~fl~~v~~A~~aGa~f~Gv~~ 279 (332)
T 3iv3_A 227 VYSKEEAAQAFREQEASTDLPYIYLSAGVS---AELFQETLVFAHKAGAKFNGVLC 279 (332)
T ss_dssp CBCHHHHHHHHHHHHHTCSSCEEEECTTCC---HHHHHHHHHHHHHHTCCCCEEEE
T ss_pred cccHHHHHHHHHHHHhcCCCCEEEECCCCC---HHHHHHHHHHHHHcCCCcceEEe
Confidence 234578887666653 4566777788999999 67654
No 69
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=26.77 E-value=2.1e+02 Score=25.79 Aligned_cols=39 Identities=13% Similarity=0.248 Sum_probs=24.6
Q ss_pred hHHHHHHHHcC---CeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEEC
Q 005894 510 TNILRDLHSAN---ISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTE 562 (671)
Q Consensus 510 ~~~V~~~~~~G---l~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD 562 (671)
+++++.+++.| +.|++-+.--.. ++..+ ...|+|+|++.
T Consensus 87 ~~~i~~L~~~g~~~i~v~vGG~~~~~-------------~~~~l-~~~G~d~v~~~ 128 (161)
T 2yxb_A 87 KRLMAKLRELGADDIPVVLGGTIPIP-------------DLEPL-RSLGIREIFLP 128 (161)
T ss_dssp HHHHHHHHHTTCTTSCEEEEECCCHH-------------HHHHH-HHTTCCEEECT
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCchh-------------cHHHH-HHCCCcEEECC
Confidence 46777888876 456665532222 34444 68999998874
No 70
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=25.82 E-value=5.1e+02 Score=25.86 Aligned_cols=119 Identities=13% Similarity=0.046 Sum_probs=59.5
Q ss_pred cHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecC--CcccCCCCCCChHHHHHHHhhcCce
Q 005894 173 NLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAN--DIYSSYSYNFEPEAEYLTFIDNSQF 250 (671)
Q Consensus 173 ~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~--~~~~~~~~~~d~~~e~~~~i~~g~~ 250 (671)
.+.++..+++.+-++...+ ..+.+.+.+-+.|..|...+=-. ... -...+..+.+.|+
T Consensus 103 ~v~~l~~~vd~lqIgA~~~-----------~n~~LLr~va~~gkPVilK~G~~~t~~e--------i~~ave~i~~~Gn- 162 (285)
T 3sz8_A 103 QAAPVAEIADVLQVPAFLA-----------RQTDLVVAIAKAGKPVNVKKPQFMSPTQ--------LKHVVSKCGEVGN- 162 (285)
T ss_dssp GHHHHHTTCSEEEECGGGT-----------TCHHHHHHHHHTSSCEEEECCTTSCGGG--------THHHHHHHHHTTC-
T ss_pred HHHHHHHhCCEEEECcccc-----------CCHHHHHHHHccCCcEEEeCCCCCCHHH--------HHHHHHHHHHcCC-
Confidence 3566666666665544332 12578888889999999887532 111 1233444555552
Q ss_pred eeeeEee----cCCCcc--ccc---------c-CCceEE--ecc----CCCC----CCCchhHHHHHHHHHCCCCeEEec
Q 005894 251 AVDGFIT----DFPTTA--TEA---------I-DRPLII--THN----GASG----VYAGCTDLAYQQAVDDGADIIDCT 304 (671)
Q Consensus 251 ~Vdgv~t----d~p~~~--~~~---------i-~~p~iI--AHR----G~s~----~~PENTl~Af~~Ai~~GaD~IE~D 304 (671)
-+-+++ .||... .+. . +-|.++ .|- |+.| .-.|=-...=.+|+..|||++=+-
T Consensus 163 -~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE 241 (285)
T 3sz8_A 163 -DRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLE 241 (285)
T ss_dssp -CCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEE
T ss_pred -CcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEE
Confidence 122332 233322 111 1 245554 453 2221 122222344567889999976666
Q ss_pred eeEccCCe
Q 005894 305 VQMSKEGV 312 (671)
Q Consensus 305 VqlTkDGv 312 (671)
+|.|.|.-
T Consensus 242 ~H~~pd~a 249 (285)
T 3sz8_A 242 AHPDPDRA 249 (285)
T ss_dssp EESCGGGC
T ss_pred eccChhcc
Confidence 77766543
No 71
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=24.27 E-value=2.3e+02 Score=27.24 Aligned_cols=73 Identities=14% Similarity=0.167 Sum_probs=45.5
Q ss_pred HHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccccCCceEEeccCCCCCCCch
Q 005894 206 TLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAGC 285 (671)
Q Consensus 206 ~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i~~p~iIAHRG~s~~~PEN 285 (671)
.+.+.|.+.|.++.....+++.. .-...+..++..+ ||||+.- + ..++.
T Consensus 29 gi~~~a~~~g~~~~~~~~~~~~~-------~~~~~~~~l~~~~---vdgiI~~---------------~------~~~~~ 77 (293)
T 3l6u_A 29 AFKAEAKANKYEALVATSQNSRI-------SEREQILEFVHLK---VDAIFIT---------------T------LDDVY 77 (293)
T ss_dssp HHHHHHHHTTCEEEEEECSSCHH-------HHHHHHHHHHHTT---CSEEEEE---------------C------SCTTT
T ss_pred HHHHHHHHcCCEEEEECCCCCHH-------HHHHHHHHHHHcC---CCEEEEe---------------c------CChHH
Confidence 56778889999998877654421 0123356677778 9999842 1 11233
Q ss_pred hHHHHHHHHHCCCCeEEeceeEcc
Q 005894 286 TDLAYQQAVDDGADIIDCTVQMSK 309 (671)
Q Consensus 286 Tl~Af~~Ai~~GaD~IE~DVqlTk 309 (671)
....++++.+.|...|=+|-....
T Consensus 78 ~~~~~~~~~~~~iPvV~~~~~~~~ 101 (293)
T 3l6u_A 78 IGSAIEEAKKAGIPVFAIDRMIRS 101 (293)
T ss_dssp THHHHHHHHHTTCCEEEESSCCCC
T ss_pred HHHHHHHHHHcCCCEEEecCCCCC
Confidence 335667777777777776655443
No 72
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=23.76 E-value=32 Score=33.40 Aligned_cols=28 Identities=21% Similarity=0.185 Sum_probs=24.3
Q ss_pred CchhHHHHHHHHHCCCCeEEeceeEccCCeE
Q 005894 283 AGCTDLAYQQAVDDGADIIDCTVQMSKEGVA 313 (671)
Q Consensus 283 PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~ 313 (671)
.+|.....+.+.+.|+|++++|+ +||..
T Consensus 16 ~~~l~~~i~~~~~~Gad~ihldi---~DG~f 43 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGADWIHVDV---MDGRF 43 (230)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEE---EBSSS
T ss_pred HhHHHHHHHHHHHcCCCEEEEEE---EecCC
Confidence 78999999999999999999999 46643
No 73
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=22.65 E-value=2.3e+02 Score=27.88 Aligned_cols=42 Identities=14% Similarity=0.053 Sum_probs=31.7
Q ss_pred hHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChh
Q 005894 510 TNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPA 565 (671)
Q Consensus 510 ~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~ 565 (671)
..+++++|++|++|..+.--+.+ ++... .+.|+|.|--.-=.
T Consensus 114 ~~~i~~L~~~GIrVSLFIDpd~~-------------qi~aA-~~~GAd~IELhTG~ 155 (260)
T 3o6c_A 114 KQSIEKLQNANIEVSLFINPSLE-------------DIEKS-KILKAQFIELHTGH 155 (260)
T ss_dssp HHHHHHHHHTTCEEEEEECSCHH-------------HHHHH-HHTTCSEEEECCHH
T ss_pred HHHHHHHHHCCCEEEEEeCCCHH-------------HHHHH-HHhCCCEEEEechH
Confidence 46899999999999988744443 56655 69999998765443
No 74
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=22.64 E-value=2.6e+02 Score=29.33 Aligned_cols=17 Identities=35% Similarity=0.229 Sum_probs=13.9
Q ss_pred HHHHHHHHHCCCCeEEe
Q 005894 287 DLAYQQAVDDGADIIDC 303 (671)
Q Consensus 287 l~Af~~Ai~~GaD~IE~ 303 (671)
...=..|+.+||++||.
T Consensus 231 ~~~~~AAvAlGA~iIEk 247 (385)
T 1vli_A 231 TEAPCAAVRLGAKLIEK 247 (385)
T ss_dssp SHHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHHcCCCEEEe
Confidence 56667888999999985
No 75
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=22.63 E-value=2e+02 Score=32.98 Aligned_cols=20 Identities=15% Similarity=-0.029 Sum_probs=17.9
Q ss_pred CcHHHHHHHHcCCeEEEeee
Q 005894 204 ATTLVTDAHNAGLQVYASGF 223 (671)
Q Consensus 204 ~~~~V~~ah~~Gl~V~~wtv 223 (671)
...+++.+|++|+++..|.-
T Consensus 398 lk~lv~~ih~~Glk~GlW~~ 417 (732)
T 2xn2_A 398 LGHFADYVHEQGLKFGLWFE 417 (732)
T ss_dssp HHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHcCCEEEEEeC
Confidence 47899999999999999963
No 76
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=21.96 E-value=1.9e+02 Score=27.76 Aligned_cols=107 Identities=14% Similarity=0.163 Sum_probs=63.5
Q ss_pred HHHHHHHHHHhcCCCCCCCceEEEEcCChH---HHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceee
Q 005894 423 VVDAVTKALSNATFDKQSTQQVMIQSDDSS---VLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSV 498 (671)
Q Consensus 423 ~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~---~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v 498 (671)
-...+.+.+.+-|.. -+-+..-.+. .++.+++. |+.-++- ..+- +.+ +.++. -..|..+ .+
T Consensus 26 ~a~~~a~al~~gGi~-----~iEvt~~t~~a~~~I~~l~~~~p~~~IGA---GTVl--t~~---~a~~a-i~AGA~f-iv 90 (217)
T 3lab_A 26 HAIPMAKALVAGGVH-----LLEVTLRTEAGLAAISAIKKAVPEAIVGA---GTVC--TAD---DFQKA-IDAGAQF-IV 90 (217)
T ss_dssp GHHHHHHHHHHTTCC-----EEEEETTSTTHHHHHHHHHHHCTTSEEEE---ECCC--SHH---HHHHH-HHHTCSE-EE
T ss_pred HHHHHHHHHHHcCCC-----EEEEeCCCccHHHHHHHHHHHCCCCeEee---cccc--CHH---HHHHH-HHcCCCE-EE
Confidence 446678888888875 4444433343 45566665 7754433 2221 222 22222 2233321 23
Q ss_pred ecCCCcccccchHHHHHHHHcCC------eEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhh
Q 005894 499 ISTTESFTTNATNILRDLHSANI------SVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPAT 566 (671)
Q Consensus 499 ~~~~~~~~~~~~~~V~~~~~~Gl------~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~ 566 (671)
.|. .++++++.++++|+ .+..-. .+.. |+.+.+ ++|+|.|=. ||..
T Consensus 91 sP~------~~~evi~~~~~~~v~~~~~~~~~PG~-~Tpt-------------E~~~A~-~~Gad~vK~-FPa~ 142 (217)
T 3lab_A 91 SPG------LTPELIEKAKQVKLDGQWQGVFLPGV-ATAS-------------EVMIAA-QAGITQLKC-FPAS 142 (217)
T ss_dssp ESS------CCHHHHHHHHHHHHHCSCCCEEEEEE-CSHH-------------HHHHHH-HTTCCEEEE-TTTT
T ss_pred eCC------CcHHHHHHHHHcCCCccCCCeEeCCC-CCHH-------------HHHHHH-HcCCCEEEE-Cccc
Confidence 332 36799999999999 888844 5554 788885 999999965 6654
No 77
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=21.89 E-value=2.9e+02 Score=26.48 Aligned_cols=78 Identities=13% Similarity=0.074 Sum_probs=41.8
Q ss_pred hcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECC--hhhHH
Q 005894 491 VTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEF--PATAS 568 (671)
Q Consensus 491 v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~--P~~~~ 568 (671)
.+.+.-.+|+.... ..-...++.+++.|..|++=|--+..- ..++..+-...+.++..+.|++|+++-. |..+.
T Consensus 90 ~gad~vtvh~~~G~--~~l~~~~~~~~~~g~~v~vLt~~s~~~--~~~~~~~~~~~~a~~a~~~G~~GvV~~at~~~e~~ 165 (228)
T 3m47_A 90 AGADAIIVHGFPGA--DSVRACLNVAEEMGREVFLLTEMSHPG--AEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLS 165 (228)
T ss_dssp TTCSEEEEESTTCH--HHHHHHHHHHHHHTCEEEEECCCCSGG--GGTTHHHHHHHHHHHHHHTTCCEEECCSSCHHHHH
T ss_pred CCCCEEEEeccCCH--HHHHHHHHHHHhcCCCeEEEEeCCCcc--HHHHHHHHHHHHHHHHHHhCCcEEEECCCChHHHH
Confidence 56665666764311 111246677777787776644333220 0111111112344454679999999864 77776
Q ss_pred HHHH
Q 005894 569 KYFR 572 (671)
Q Consensus 569 ~~~~ 572 (671)
++++
T Consensus 166 ~ir~ 169 (228)
T 3m47_A 166 RLRE 169 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 78
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=21.46 E-value=3.5e+02 Score=28.28 Aligned_cols=52 Identities=15% Similarity=0.213 Sum_probs=33.8
Q ss_pred chHHHHHHHHcCCeEEEEeccCccc----ccccccCCChHHHHHHHHhhcCccEEEECCh
Q 005894 509 ATNILRDLHSANISVYISALRNEYL----SIAFDYLADPLIEVATFAQGVGVDGITTEFP 564 (671)
Q Consensus 509 ~~~~V~~~~~~Gl~V~vwtvn~~~~----~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P 564 (671)
-+.+++.+|+.|+++.+|.--.... .-..+|. ..+++.+ .++|||+|=.|+-
T Consensus 76 l~~l~~~i~~~Glk~Giw~~pg~~tc~~~pg~~~~~---~~~~~~~-~~wGvdyvK~D~~ 131 (397)
T 3a5v_A 76 IKPLVDDIHNLGLKAGIYSSAGTLTCGGHIASLGYE---DIDAKTW-AKWGIDYLKYDNC 131 (397)
T ss_dssp HHHHHHHHHHTTCEEEEEEESSSBCTTSCBCCTTCH---HHHHHHH-HHHTCCEEEEECT
T ss_pred HHHHHHHHHHcCCEEEEEecCCCCccCCCHHHHHHH---HHHHHHH-HHcCCCEEEECCC
Confidence 4678999999999999996533210 0011221 1234444 6999999999983
No 79
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=21.45 E-value=7.8e+02 Score=26.53 Aligned_cols=37 Identities=8% Similarity=0.090 Sum_probs=27.9
Q ss_pred HHHHHcCCeEEE-EeccCcccccccccCCChHHHHHHHHhhcCccEEEECCh
Q 005894 514 RDLHSANISVYI-SALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP 564 (671)
Q Consensus 514 ~~~~~~Gl~V~v-wtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P 564 (671)
+.+++.+++|.+ -.+.+.. ++.+++ .+|+|+++-=.+
T Consensus 353 ~~~~~~~iPVIa~GGI~~~~-------------di~kal-a~GA~~V~vGs~ 390 (511)
T 3usb_A 353 TEARKHGIPVIADGGIKYSG-------------DMVKAL-AAGAHVVMLGSM 390 (511)
T ss_dssp HHHHTTTCCEEEESCCCSHH-------------HHHHHH-HTTCSEEEESTT
T ss_pred HHHHhCCCcEEEeCCCCCHH-------------HHHHHH-HhCchhheecHH
Confidence 345556888877 4777776 788886 899999997754
No 80
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=21.40 E-value=6.5e+02 Score=25.55 Aligned_cols=146 Identities=21% Similarity=0.288 Sum_probs=75.3
Q ss_pred ccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChH-----------HHH
Q 005894 387 FVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSS-----------VLS 455 (671)
Q Consensus 387 ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~-----------~L~ 455 (671)
+.++.|+|+.+++.+..---+++-+ .+.+.+++++-++.+ ..|++|-.... .+.
T Consensus 3 lv~~~~ll~~A~~~~yAV~AfNv~n---------~e~~~Ail~AAee~~------sPvIlq~s~g~~~y~g~~~~~~~v~ 67 (323)
T 2isw_A 3 LCTLRQMLGEARKHKYGVGAFNVNN---------MEQIQGIMKAVVQLK------SPVILQCSRGALKYSDMIYLKKLCE 67 (323)
T ss_dssp BCCHHHHHHHHHHTTCCEEEEECCS---------HHHHHHHHHHHHHTT------CCEEEEEEHHHHHHTTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCceEEEEeeCC---------HHHHHHHHHHHHHhC------CCEEEECChhHHHhCCHHHHHHHHH
Confidence 5678999998887632111334332 256677888777764 36777753221 122
Q ss_pred HHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceee-ecCCC-cc---cccchHHHHHHHHcCCeEEEEe--
Q 005894 456 KFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSV-ISTTE-SF---TTNATNILRDLHSANISVYISA-- 527 (671)
Q Consensus 456 ~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v-~~~~~-~~---~~~~~~~V~~~~~~Gl~V~vwt-- 527 (671)
...+. ..+|+++-.+... ..+.+++-. ..| +.++ +..+. .| +..+.++|+.+|+.|+.|=+-.
T Consensus 68 ~aa~~~~~VPValHlDHg~------~~e~i~~ai-~~G--FtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~ 138 (323)
T 2isw_A 68 AALEKHPDIPICIHLDHGD------TLESVKMAI-DLG--FSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGT 138 (323)
T ss_dssp HHHHHCTTSCEEEEEEEEC------SHHHHHHHH-HTT--CSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESC
T ss_pred HHHHhcCCCcEEEECCCCC------CHHHHHHHH-HcC--CCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 22233 6788888877642 123333222 223 2333 22221 11 3356789999999999883331
Q ss_pred ccC-c-ccccccccCCChHHHHHHHHhhcCccE
Q 005894 528 LRN-E-YLSIAFDYLADPLIEVATFAQGVGVDG 558 (671)
Q Consensus 528 vn~-~-~~~~~~d~~~D~~~e~~~~l~~~GVDg 558 (671)
+.. + .. ..-....||+ +..+++.+.|||.
T Consensus 139 vgg~Ed~v-~~~~~yTdPe-ea~~Fv~~TgvD~ 169 (323)
T 2isw_A 139 LGGIEEDV-QNTVQLTEPQ-DAKKFVELTGVDA 169 (323)
T ss_dssp C-----------CCCCCHH-HHHHHHHHHCCSE
T ss_pred ccCCccCc-ccccccCCHH-HHHHHHHHHCCCE
Confidence 111 1 11 0112345666 5556656677763
No 81
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=21.29 E-value=2.8e+02 Score=27.05 Aligned_cols=37 Identities=22% Similarity=0.198 Sum_probs=27.9
Q ss_pred hHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEE
Q 005894 510 TNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGIT 560 (671)
Q Consensus 510 ~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIi 560 (671)
...++++|++|++|..+.--+.. ++... .+.|+|.|-
T Consensus 117 ~~~i~~L~~~GIrVSLFIDpd~~-------------qi~aA-~~~GA~~IE 153 (243)
T 1m5w_A 117 RDACKRLADAGIQVSLFIDADEE-------------QIKAA-AEVGAPFIE 153 (243)
T ss_dssp HHHHHHHHHTTCEEEEEECSCHH-------------HHHHH-HHTTCSEEE
T ss_pred HHHHHHHHHCCCEEEEEeCCCHH-------------HHHHH-HHhCcCEEE
Confidence 45788999999999888654443 56665 589998885
No 82
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=20.84 E-value=3.3e+02 Score=26.01 Aligned_cols=75 Identities=9% Similarity=0.099 Sum_probs=44.1
Q ss_pred cHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccccCCceEEeccCCCCCCCc
Q 005894 205 TTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAG 284 (671)
Q Consensus 205 ~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i~~p~iIAHRG~s~~~PE 284 (671)
..+-+.|++.|..+.....+++.. .....++.++..+ ||||+..-. ....+.
T Consensus 35 ~gi~~~a~~~g~~~~~~~~~~~~~-------~~~~~~~~l~~~~---vdgiIi~~~------------------~~~~~~ 86 (298)
T 3tb6_A 35 RGIESYLSEQGYSMLLTSTNNNPD-------NERRGLENLLSQH---IDGLIVEPT------------------KSALQT 86 (298)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH-------HHHHHHHHHHHTC---CSEEEECCS------------------STTSCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCChH-------HHHHHHHHHHHCC---CCEEEEecc------------------cccccC
Confidence 356778899999998876654421 1123356677778 999995211 111223
Q ss_pred hhHHHHHHHHHCCCCeEEeceeE
Q 005894 285 CTDLAYQQAVDDGADIIDCTVQM 307 (671)
Q Consensus 285 NTl~Af~~Ai~~GaD~IE~DVql 307 (671)
.....++++.+.|.-.|-+|-..
T Consensus 87 ~~~~~~~~~~~~~iPvV~~~~~~ 109 (298)
T 3tb6_A 87 PNIGYYLNLEKNGIPFAMINASY 109 (298)
T ss_dssp TTHHHHHHHHHTTCCEEEESSCC
T ss_pred CcHHHHHHHHhcCCCEEEEecCc
Confidence 34456666666666666555443
No 83
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=20.77 E-value=3.6e+02 Score=27.83 Aligned_cols=19 Identities=26% Similarity=0.375 Sum_probs=14.1
Q ss_pred HHHHHHHCCCCeEEeceeE
Q 005894 289 AYQQAVDDGADIIDCTVQM 307 (671)
Q Consensus 289 Af~~Ai~~GaD~IE~DVql 307 (671)
+-..|+.+||++||.=+.+
T Consensus 210 ~~~AAvAlGA~vIEkH~tl 228 (350)
T 3g8r_A 210 PIMLAVAQGATVFEKHVGL 228 (350)
T ss_dssp HHHHHHHTTCCEEEEEBCC
T ss_pred HHHHHHHcCCCEEEEecCc
Confidence 4457999999999964433
No 84
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=20.19 E-value=2.1e+02 Score=27.89 Aligned_cols=43 Identities=16% Similarity=0.264 Sum_probs=29.0
Q ss_pred cHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEee
Q 005894 205 TTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFIT 257 (671)
Q Consensus 205 ~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~t 257 (671)
..+-+.|.+.|..+.....+++.. .-...++.++..+ ||||+.
T Consensus 22 ~gi~~~a~~~g~~~~~~~~~~~~~-------~~~~~i~~l~~~~---vdgiIi 64 (313)
T 3m9w_A 22 DIFVKKAESLGAKVFVQSANGNEE-------TQMSQIENMINRG---VDVLVI 64 (313)
T ss_dssp HHHHHHHHHTSCEEEEEECTTCHH-------HHHHHHHHHHHTT---CSEEEE
T ss_pred HHHHHHHHHcCCEEEEECCCCCHH-------HHHHHHHHHHHcC---CCEEEE
Confidence 356778889999988876654421 0113355677788 999985
No 85
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=20.06 E-value=5.3e+02 Score=26.21 Aligned_cols=137 Identities=16% Similarity=0.270 Sum_probs=80.6
Q ss_pred cHHHHHHHHHHhcCCCCCCCceEEEEcCChHH----HHHHhcC----CCc--eEEEEeecccCCCChhHHHHHH-HHHHH
Q 005894 422 GVVDAVTKALSNATFDKQSTQQVMIQSDDSSV----LSKFQDV----PAY--KKVLHIRKEVSAAPREVVEEIK-KYASA 490 (671)
Q Consensus 422 ~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~----L~~lk~~----p~~--~~~~l~~~~~~d~~~~~l~~i~-~~a~~ 490 (671)
.-+.++-+.|.+.|+. +++-|.|+.... ---||.. |.+ +..|-++..- ..+.+.++. +..+
T Consensus 173 GrV~aIR~aLd~~G~~----~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN---~~EAlre~~~Di~E- 244 (330)
T 1pv8_A 173 GRVEAIKEALMAHGLG----NRVSVMSYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGA---RGLALRAVDRDVRE- 244 (330)
T ss_dssp CHHHHHHHHHHHTTCT----TTCEEBCCCEECCCGGGHHHHHCC-------------CCTTC---HHHHHHHHHHHHHT-
T ss_pred cHHHHHHHHHHhCCCc----CCceEeehhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCCC---HHHHHHHHHhhHHh-
Confidence 5678999999999998 568888876432 2234443 221 2223222210 112233322 2233
Q ss_pred hcCCceeeecCCCcccccchHHHHHHHH-c-CCeEEEEeccCccccccc---ccCCChHH---HHHHHHhhcCccEEEEC
Q 005894 491 VTVTRTSVISTTESFTTNATNILRDLHS-A-NISVYISALRNEYLSIAF---DYLADPLI---EVATFAQGVGVDGITTE 562 (671)
Q Consensus 491 v~~~~~~v~~~~~~~~~~~~~~V~~~~~-~-Gl~V~vwtvn~~~~~~~~---d~~~D~~~---e~~~~l~~~GVDgIiTD 562 (671)
|.+.-+|-|.- .| -.+|+++++ . ++++.+|-|.-|.-+.-. +-|-|... |....++..|.|+|+|=
T Consensus 245 -GAD~vMVKPal-~Y----LDIi~~vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTY 318 (330)
T 1pv8_A 245 -GADMLMVKPGM-PY----LDIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITY 318 (330)
T ss_dssp -TCSBEEEESCG-GG----HHHHHHHHHHSTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred -CCceEEEecCc-cH----HHHHHHHHHhcCCCCeEEEEcCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEeee
Confidence 33445666643 22 368888886 5 799999999877533322 33566543 33333468999999999
Q ss_pred ChhhHHHHHH
Q 005894 563 FPATASKYFR 572 (671)
Q Consensus 563 ~P~~~~~~~~ 572 (671)
|-..+.++++
T Consensus 319 fA~~~a~~L~ 328 (330)
T 1pv8_A 319 YTPQLLQWLK 328 (330)
T ss_dssp THHHHHHHTT
T ss_pred cHHHHHHHhc
Confidence 9999988875
No 86
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=20.04 E-value=2.7e+02 Score=24.19 Aligned_cols=44 Identities=11% Similarity=0.191 Sum_probs=25.5
Q ss_pred hHHHHHHHHcCC---eEEEEecc--CcccccccccCCChHHHHHHHHhhcCccEEEECC
Q 005894 510 TNILRDLHSANI---SVYISALR--NEYLSIAFDYLADPLIEVATFAQGVGVDGITTEF 563 (671)
Q Consensus 510 ~~~V~~~~~~Gl---~V~vwtvn--~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~ 563 (671)
+++++.++++|+ +|++-+.- .+. +| .+....+.++|+|+++.+-
T Consensus 72 ~~~i~~l~~~g~~~i~v~vGG~~~~~~~-----~~-----~~~~~~~~~~G~d~~~~~g 120 (137)
T 1ccw_A 72 KGLRQKCDEAGLEGILLYVGGNIVVGKQ-----HW-----PDVEKRFKDMGYDRVYAPG 120 (137)
T ss_dssp TTHHHHHHHTTCTTCEEEEEESCSSSSC-----CH-----HHHHHHHHHTTCSEECCTT
T ss_pred HHHHHHHHhcCCCCCEEEEECCCcCchH-----hh-----hhhHHHHHHCCCCEEECCC
Confidence 457888888765 45555421 111 11 0223344789999999863
Done!