Query 005898
Match_columns 671
No_of_seqs 632 out of 5247
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 10:27:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005898.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005898hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 1.7E-41 5.8E-46 355.1 22.3 295 25-368 2-306 (313)
2 3rgz_A Protein brassinosteroid 100.0 3.7E-41 1.3E-45 394.8 20.3 339 20-368 3-382 (768)
3 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-39 4.6E-44 336.6 11.2 166 483-659 13-226 (299)
4 4aoj_A High affinity nerve gro 100.0 4.9E-39 1.7E-43 336.9 13.5 166 483-659 41-256 (329)
5 4gt4_A Tyrosine-protein kinase 100.0 7.3E-39 2.5E-43 332.5 11.0 165 484-659 27-243 (308)
6 3omv_A RAF proto-oncogene seri 100.0 4.1E-38 1.4E-42 325.7 13.4 165 482-662 35-236 (307)
7 4eco_A Uncharacterized protein 100.0 1.3E-37 4.4E-42 356.8 18.5 311 28-367 29-470 (636)
8 4ecn_A Leucine-rich repeat pro 100.0 4.4E-37 1.5E-41 359.6 20.4 252 110-367 440-741 (876)
9 4b9d_A Serine/threonine-protei 100.0 1.4E-37 4.7E-42 326.4 12.7 169 483-663 24-225 (350)
10 4fih_A Serine/threonine-protei 100.0 7.8E-38 2.7E-42 327.7 9.9 166 483-663 74-270 (346)
11 3hmm_A TGF-beta receptor type- 100.0 2.9E-37 9.9E-42 320.8 11.3 168 484-661 4-216 (303)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.4E-37 8.3E-42 319.3 9.9 167 483-663 32-234 (311)
13 3fpq_A Serine/threonine-protei 100.0 6.9E-37 2.3E-41 314.2 12.2 170 486-663 29-229 (290)
14 4fie_A Serine/threonine-protei 100.0 5.6E-37 1.9E-41 329.1 11.6 166 482-662 150-346 (423)
15 3rgz_A Protein brassinosteroid 100.0 7.9E-36 2.7E-40 349.6 19.0 264 109-372 409-722 (768)
16 4ase_A Vascular endothelial gr 100.0 9.4E-37 3.2E-41 322.2 9.5 176 474-659 55-283 (353)
17 4g3f_A NF-kappa-beta-inducing 100.0 1.8E-36 6.2E-41 316.4 9.8 163 482-663 57-256 (336)
18 3hyh_A Carbon catabolite-derep 100.0 5E-36 1.7E-40 305.1 12.3 166 483-663 13-212 (275)
19 4g31_A Eukaryotic translation 100.0 5.7E-36 2E-40 309.8 12.2 173 483-658 5-225 (299)
20 3ubd_A Ribosomal protein S6 ki 100.0 8.9E-37 3E-41 315.0 4.2 167 483-663 24-226 (304)
21 3v47_A TOLL-like receptor 5B a 100.0 6.1E-33 2.1E-37 305.3 22.9 268 101-368 37-385 (455)
22 4b99_A Mitogen-activated prote 100.0 8.9E-34 3E-38 304.6 13.3 172 483-663 54-263 (398)
23 4fcg_A Uncharacterized protein 100.0 8.1E-34 2.8E-38 298.8 12.6 277 26-367 24-314 (328)
24 3v5w_A G-protein coupled recep 100.0 5.6E-33 1.9E-37 311.2 13.2 169 482-664 188-392 (689)
25 2id5_A Lingo-1, leucine rich r 100.0 1.5E-31 5.1E-36 296.3 21.9 258 111-368 49-334 (477)
26 4f9c_A Cell division cycle 7-r 100.0 1.7E-32 5.8E-37 291.4 12.3 143 480-641 18-166 (361)
27 3uto_A Twitchin; kinase, muscl 100.0 2.9E-32 9.8E-37 306.9 12.9 169 482-663 156-356 (573)
28 3v47_A TOLL-like receptor 5B a 100.0 6.2E-31 2.1E-35 289.3 22.9 252 118-369 30-362 (455)
29 1ogq_A PGIP-2, polygalacturona 100.0 5.7E-32 2E-36 282.8 13.9 232 118-372 50-286 (313)
30 3oja_B Anopheles plasmodium-re 100.0 1.3E-30 4.3E-35 296.9 21.4 256 108-369 64-339 (597)
31 4eco_A Uncharacterized protein 100.0 3.3E-31 1.1E-35 303.7 13.9 254 110-368 239-527 (636)
32 3vq2_A TLR4, TOLL-like recepto 100.0 8.8E-30 3E-34 290.5 24.5 295 74-369 33-512 (606)
33 3t6q_A CD180 antigen; protein- 100.0 6.7E-30 2.3E-34 291.5 23.6 255 112-368 272-537 (606)
34 4g8a_A TOLL-like receptor 4; l 100.0 1.2E-29 4E-34 290.3 24.6 128 100-227 58-186 (635)
35 3o6n_A APL1; leucine-rich repe 100.0 5.2E-30 1.8E-34 276.3 19.7 255 108-368 58-332 (390)
36 3uim_A Brassinosteroid insensi 100.0 6.3E-31 2.1E-35 276.2 11.4 185 470-662 17-234 (326)
37 3t6q_A CD180 antigen; protein- 100.0 2.1E-29 7.3E-34 287.3 23.9 268 100-368 39-364 (606)
38 4ecn_A Leucine-rich repeat pro 100.0 1.5E-29 5.1E-34 296.0 22.4 248 110-363 481-785 (876)
39 2z7x_B TOLL-like receptor 1, v 100.0 5.6E-29 1.9E-33 278.6 26.1 131 234-367 321-457 (520)
40 3j0a_A TOLL-like receptor 5; m 100.0 3E-29 1E-33 296.8 25.1 296 73-368 24-376 (844)
41 2qkw_B Protein kinase; three-h 100.0 8.3E-31 2.8E-35 274.8 9.9 178 474-662 30-240 (321)
42 1xku_A Decorin; proteoglycan, 100.0 1E-28 3.4E-33 260.1 25.7 246 118-367 52-306 (330)
43 3j0a_A TOLL-like receptor 5; m 100.0 2.5E-29 8.4E-34 297.5 22.5 271 100-370 30-354 (844)
44 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.5E-28 5E-33 278.0 27.7 263 100-368 58-487 (562)
45 2c30_A Serine/threonine-protei 100.0 4.3E-30 1.5E-34 269.5 14.0 176 472-662 24-240 (321)
46 1ziw_A TOLL-like receptor 3; i 100.0 5.5E-29 1.9E-33 287.9 23.9 267 101-367 32-366 (680)
47 3fe3_A MAP/microtubule affinit 100.0 4E-30 1.4E-34 270.5 13.0 167 482-662 14-213 (328)
48 2ft3_A Biglycan; proteoglycan, 100.0 1.3E-28 4.6E-33 259.4 24.1 245 118-367 54-307 (332)
49 2id5_A Lingo-1, leucine rich r 100.0 6.3E-29 2.1E-33 275.2 22.4 251 118-368 32-310 (477)
50 3vq2_A TLR4, TOLL-like recepto 100.0 9.7E-29 3.3E-33 281.9 24.5 295 74-368 57-535 (606)
51 3s95_A LIMK-1, LIM domain kina 100.0 9.1E-30 3.1E-34 265.5 14.4 170 483-665 10-224 (310)
52 3fxz_A Serine/threonine-protei 100.0 7.9E-30 2.7E-34 264.5 13.2 166 482-662 19-215 (297)
53 4aw2_A Serine/threonine-protei 100.0 2.7E-30 9.1E-35 281.7 9.6 175 475-662 66-280 (437)
54 2nru_A Interleukin-1 receptor- 100.0 1.9E-29 6.3E-34 262.6 14.8 180 471-662 13-233 (307)
55 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.2E-30 2.8E-34 270.8 11.6 168 481-662 21-223 (353)
56 2ft3_A Biglycan; proteoglycan, 100.0 2.3E-28 8E-33 257.5 22.6 259 100-365 60-331 (332)
57 3zgw_A Maternal embryonic leuc 100.0 8.8E-30 3E-34 269.7 11.6 167 482-662 9-209 (347)
58 1o6l_A RAC-beta serine/threoni 100.0 9.7E-30 3.3E-34 268.5 11.8 166 483-662 5-204 (337)
59 2psq_A Fibroblast growth facto 100.0 1.2E-29 4.1E-34 271.5 12.7 166 482-658 80-300 (370)
60 1xku_A Decorin; proteoglycan, 100.0 4.7E-28 1.6E-32 254.9 24.5 260 100-365 58-330 (330)
61 3v8s_A RHO-associated protein 100.0 3.4E-30 1.2E-34 278.7 7.7 172 476-662 62-272 (410)
62 2z63_A TOLL-like receptor 4, v 100.0 3.3E-28 1.1E-32 275.2 24.1 136 234-369 370-509 (570)
63 3p86_A Serine/threonine-protei 100.0 9.6E-30 3.3E-34 265.4 10.6 171 481-661 35-237 (309)
64 2qol_A Ephrin receptor; recept 100.0 1.5E-29 5E-34 271.1 12.1 163 483-658 45-245 (373)
65 2z81_A CD282 antigen, TOLL-lik 100.0 1.7E-28 5.7E-33 276.5 21.2 293 74-370 27-489 (549)
66 1fot_A TPK1 delta, CAMP-depend 100.0 1.7E-29 5.7E-34 264.6 11.8 166 483-662 6-202 (318)
67 3qd2_B Eukaryotic translation 100.0 2.1E-29 7.3E-34 264.6 12.4 177 482-661 5-274 (332)
68 3ugc_A Tyrosine-protein kinase 100.0 1E-29 3.5E-34 263.0 9.5 167 483-660 10-214 (295)
69 2z7x_B TOLL-like receptor 1, v 100.0 5.5E-29 1.9E-33 278.6 16.1 262 99-368 26-413 (520)
70 3kul_A Ephrin type-A receptor 100.0 2.7E-29 9.1E-34 264.0 12.6 163 483-658 49-249 (325)
71 2vd5_A DMPK protein; serine/th 100.0 5.8E-30 2E-34 277.1 7.6 176 474-662 52-269 (412)
72 4eqm_A Protein kinase; transfe 100.0 3.6E-29 1.2E-33 259.1 13.1 166 483-662 11-211 (294)
73 4fcg_A Uncharacterized protein 100.0 1.4E-28 4.7E-33 258.8 17.7 226 72-343 80-314 (328)
74 2yab_A Death-associated protei 100.0 3.6E-29 1.2E-33 266.6 13.1 168 482-663 11-218 (361)
75 4dc2_A Protein kinase C IOTA t 100.0 1.6E-29 5.6E-34 271.9 10.0 168 482-663 51-253 (396)
76 1xjd_A Protein kinase C, theta 100.0 2.1E-29 7E-34 266.7 10.5 169 480-662 14-217 (345)
77 3oja_A Leucine-rich immune mol 100.0 2.3E-30 7.7E-35 287.1 3.3 223 110-367 22-250 (487)
78 3a8x_A Protein kinase C IOTA t 100.0 3.2E-29 1.1E-33 265.5 11.9 166 483-662 9-209 (345)
79 3soc_A Activin receptor type-2 100.0 2.6E-29 9E-34 263.6 10.9 171 482-662 23-237 (322)
80 3cbl_A C-FES, proto-oncogene t 100.0 1.5E-29 5E-34 271.6 9.0 166 481-659 112-311 (377)
81 1tki_A Titin; serine kinase, m 100.0 7E-29 2.4E-33 260.3 13.5 167 482-662 4-202 (321)
82 4fr4_A YANK1, serine/threonine 100.0 2.8E-29 9.7E-34 269.1 10.6 167 483-663 15-217 (384)
83 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-27 4.6E-32 276.3 25.4 297 74-370 26-397 (680)
84 3zyi_A Leucine-rich repeat-con 100.0 1.2E-27 4.1E-32 263.1 23.4 225 118-343 75-303 (452)
85 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.9E-29 1.3E-33 265.3 11.1 166 483-662 41-237 (350)
86 3tki_A Serine/threonine-protei 100.0 4E-29 1.4E-33 262.4 10.9 166 483-662 7-207 (323)
87 4euu_A Serine/threonine-protei 100.0 5.6E-29 1.9E-33 260.7 11.7 171 483-662 9-222 (319)
88 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.6E-29 1.2E-33 267.3 10.4 169 481-663 63-285 (365)
89 3a62_A Ribosomal protein S6 ki 100.0 4.7E-29 1.6E-33 262.3 11.1 166 482-661 16-219 (327)
90 2z63_A TOLL-like receptor 4, v 100.0 1.4E-27 4.6E-32 270.1 23.9 296 74-370 29-486 (570)
91 1kob_A Twitchin; kinase, intra 100.0 1.2E-28 3.9E-33 265.1 14.0 168 482-662 50-249 (387)
92 3vhe_A Vascular endothelial gr 100.0 2.3E-29 7.8E-34 267.9 8.3 176 473-658 12-290 (359)
93 2z80_A TOLL-like receptor 2, v 100.0 2.9E-28 1E-32 259.0 16.8 250 118-369 52-316 (353)
94 4hcu_A Tyrosine-protein kinase 100.0 7.8E-29 2.7E-33 252.9 11.9 163 483-659 10-203 (269)
95 2y0a_A Death-associated protei 100.0 7.8E-29 2.7E-33 260.5 12.2 166 483-662 11-216 (326)
96 2bdw_A Hypothetical protein K1 100.0 1E-28 3.5E-33 263.5 13.2 167 482-662 28-229 (362)
97 3oja_B Anopheles plasmodium-re 100.0 9.1E-28 3.1E-32 273.3 21.9 259 100-369 81-360 (597)
98 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.3E-28 2.1E-32 272.8 20.4 247 118-369 52-443 (562)
99 3niz_A Rhodanese family protei 100.0 7E-29 2.4E-33 259.1 11.6 167 482-662 20-219 (311)
100 1qcf_A Haematopoetic cell kina 100.0 3.6E-29 1.2E-33 275.3 9.8 167 479-659 184-381 (454)
101 3zyj_A Leucine-rich repeat-con 100.0 1.5E-27 5.2E-32 261.3 22.7 225 118-343 64-292 (440)
102 1k9a_A Carboxyl-terminal SRC k 100.0 8.5E-29 2.9E-33 271.9 12.5 164 482-659 192-382 (450)
103 2i0e_A Protein kinase C-beta I 100.0 5.2E-29 1.8E-33 264.5 10.4 168 481-662 18-220 (353)
104 2x4f_A Myosin light chain kina 100.0 7.1E-29 2.4E-33 265.7 11.4 163 487-662 93-287 (373)
105 2z66_A Variable lymphocyte rec 100.0 4.2E-28 1.4E-32 252.4 16.9 231 118-369 28-263 (306)
106 1wwl_A Monocyte differentiatio 100.0 2.1E-29 7.3E-34 263.2 7.0 245 114-368 39-310 (312)
107 2zv2_A Calcium/calmodulin-depe 100.0 8E-29 2.7E-33 256.8 11.2 168 482-662 12-239 (298)
108 2z81_A CD282 antigen, TOLL-lik 100.0 2.6E-28 8.9E-33 274.9 16.0 267 99-367 31-423 (549)
109 1opk_A P150, C-ABL, proto-onco 100.0 5.7E-29 1.9E-33 276.5 10.4 165 482-659 219-415 (495)
110 4fvq_A Tyrosine-protein kinase 100.0 9.1E-29 3.1E-33 254.9 11.0 167 483-662 8-217 (289)
111 3c0i_A Peripheral plasma membr 100.0 6.5E-29 2.2E-33 263.9 10.2 169 483-662 24-232 (351)
112 2z66_A Variable lymphocyte rec 100.0 1.1E-27 3.8E-32 249.3 18.9 226 121-371 10-240 (306)
113 3rp9_A Mitogen-activated prote 100.0 1.4E-28 4.7E-33 271.1 12.7 150 483-642 53-205 (458)
114 1luf_A Muscle-specific tyrosin 100.0 1.2E-28 4E-33 260.6 11.3 168 480-658 44-271 (343)
115 3o0g_A Cell division protein k 100.0 1.8E-28 6.1E-33 253.4 12.3 167 483-663 2-202 (292)
116 3gen_A Tyrosine-protein kinase 100.0 6.3E-29 2.2E-33 255.4 8.6 163 482-658 23-216 (283)
117 3soa_A Calcium/calmodulin-depe 100.0 2.1E-28 7.1E-33 267.7 13.1 168 481-662 9-212 (444)
118 4ejn_A RAC-alpha serine/threon 100.0 4.5E-29 1.5E-33 274.0 7.8 167 482-662 147-348 (446)
119 2pmi_A Negative RE, cyclin-dep 100.0 2E-28 6.7E-33 256.4 12.3 169 482-662 4-208 (317)
120 3h4j_B AMPK kdaid, SNF1-like p 100.0 9.8E-29 3.3E-33 260.6 9.9 165 483-662 9-207 (336)
121 2acx_A G protein-coupled recep 100.0 1.3E-28 4.5E-33 275.1 11.5 169 482-662 183-384 (576)
122 2w4o_A Calcium/calmodulin-depe 100.0 1.4E-28 4.8E-33 261.1 11.1 166 481-662 51-249 (349)
123 1ob3_A PFPK5, cell division co 100.0 1.1E-28 3.9E-33 254.4 10.1 166 483-662 2-200 (288)
124 3uc3_A Serine/threonine-protei 100.0 1.7E-28 5.8E-33 261.7 11.6 166 482-662 19-217 (361)
125 3l9p_A Anaplastic lymphoma kin 100.0 7.8E-29 2.7E-33 264.9 8.9 166 482-658 70-281 (367)
126 2r5t_A Serine/threonine-protei 100.0 8.8E-29 3E-33 264.7 9.2 167 482-662 37-238 (373)
127 3q4u_A Activin receptor type-1 100.0 2.1E-28 7.1E-33 253.7 11.7 166 482-659 7-219 (301)
128 3ork_A Serine/threonine protei 99.9 7E-29 2.4E-33 259.0 8.0 171 482-662 11-218 (311)
129 3sxs_A Cytoplasmic tyrosine-pr 99.9 1.6E-28 5.4E-33 250.3 10.4 163 482-658 7-200 (268)
130 3p1a_A MYT1 kinase, membrane-a 99.9 1.5E-28 5.2E-33 256.5 10.4 166 483-662 57-254 (311)
131 2y94_A 5'-AMP-activated protei 99.9 1.9E-28 6.6E-33 269.8 11.7 166 483-662 16-215 (476)
132 2eva_A TAK1 kinase - TAB1 chim 99.9 1.8E-28 6.1E-33 255.5 10.7 167 483-662 8-202 (307)
133 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 9.7E-29 3.3E-33 271.6 8.9 165 481-659 182-377 (452)
134 3qup_A Tyrosine-protein kinase 99.9 2.1E-28 7.3E-33 256.5 11.1 174 481-659 21-235 (323)
135 2ivs_A Proto-oncogene tyrosine 99.9 2.5E-28 8.5E-33 254.6 11.3 166 482-658 22-247 (314)
136 3tt0_A Basic fibroblast growth 99.9 3.2E-28 1.1E-32 261.7 12.3 166 482-658 68-288 (382)
137 3uqc_A Probable conserved tran 99.9 3.9E-28 1.3E-32 250.3 12.5 164 483-662 31-201 (286)
138 3zyi_A Leucine-rich repeat-con 99.9 1.1E-26 3.7E-31 255.5 24.6 245 121-370 57-306 (452)
139 3c1x_A Hepatocyte growth facto 99.9 2.1E-28 7.2E-33 262.0 10.5 168 484-663 90-296 (373)
140 3poz_A Epidermal growth factor 99.9 1.5E-28 5E-33 258.5 9.1 162 483-658 15-214 (327)
141 3f3z_A Calcium/calmodulin-depe 99.9 3.3E-28 1.1E-32 249.2 11.3 167 482-662 8-206 (277)
142 3c4z_A Rhodopsin kinase; Ser/T 99.9 2.9E-28 1E-32 271.6 11.7 170 483-663 185-389 (543)
143 3ttj_A Mitogen-activated prote 99.9 4.1E-28 1.4E-32 267.2 12.7 171 482-663 61-263 (464)
144 1u5q_A Serine/threonine protei 99.9 3.3E-28 1.1E-32 258.1 11.5 166 483-662 54-252 (348)
145 4eut_A Serine/threonine-protei 99.9 2.4E-28 8.2E-33 263.9 10.7 172 483-663 9-223 (396)
146 3lxl_A Tyrosine-protein kinase 99.9 3.2E-28 1.1E-32 255.8 11.1 168 483-661 23-228 (327)
147 3o6n_A APL1; leucine-rich repe 99.9 5.3E-27 1.8E-31 252.8 20.8 247 116-368 43-309 (390)
148 1mp8_A Focal adhesion kinase 1 99.9 3.4E-28 1.2E-32 249.8 10.9 163 482-658 14-212 (281)
149 4e5w_A Tyrosine-protein kinase 99.9 3.5E-28 1.2E-32 252.2 10.9 168 483-661 21-227 (302)
150 2h8h_A Proto-oncogene tyrosine 99.9 1.4E-28 4.9E-33 275.8 8.6 165 481-659 265-460 (535)
151 3gni_B Strad alpha; kinase fol 99.9 5.1E-28 1.7E-32 260.7 12.5 170 482-663 24-237 (389)
152 3dtc_A Mitogen-activated prote 99.9 4.2E-28 1.4E-32 247.5 11.2 167 483-662 7-213 (271)
153 3i6u_A CDS1, serine/threonine- 99.9 4.5E-28 1.5E-32 263.7 12.0 168 481-663 133-344 (419)
154 2ac3_A MAP kinase-interacting 99.9 6.1E-28 2.1E-32 252.1 12.6 167 483-663 12-226 (316)
155 4f0f_A Serine/threonine-protei 99.9 7.9E-28 2.7E-32 247.7 12.7 167 483-662 19-227 (287)
156 3kn6_A Ribosomal protein S6 ki 99.9 9.1E-28 3.1E-32 252.3 13.2 158 488-662 16-208 (325)
157 3f66_A Hepatocyte growth facto 99.9 9.8E-28 3.4E-32 248.4 13.0 169 483-663 25-232 (298)
158 3kmu_A ILK, integrin-linked ki 99.9 6.9E-28 2.4E-32 245.5 11.6 171 483-662 10-210 (271)
159 3bz5_A Internalin-J, INLJ; leu 99.9 3.8E-26 1.3E-30 251.0 26.4 172 114-301 81-252 (457)
160 1rjb_A FL cytokine receptor; k 99.9 3.9E-28 1.3E-32 256.9 10.2 167 481-658 43-269 (344)
161 1t46_A HOMO sapiens V-KIT hard 99.9 4.8E-28 1.7E-32 252.3 10.7 167 482-659 22-243 (313)
162 3lb7_A RAF proto-oncogene seri 99.9 8.4E-28 2.9E-32 250.4 12.5 165 482-662 35-236 (307)
163 3oz6_A Mitogen-activated prote 99.9 7.5E-28 2.6E-32 259.3 12.4 169 481-663 7-231 (388)
164 2ozo_A Tyrosine-protein kinase 99.9 6E-28 2E-32 274.8 12.1 155 490-658 343-534 (613)
165 4agu_A Cyclin-dependent kinase 99.9 8.7E-28 3E-32 250.4 12.4 166 483-662 3-202 (311)
166 2pvf_A Fibroblast growth facto 99.9 7.2E-28 2.5E-32 253.9 11.9 166 482-658 34-254 (334)
167 1cm8_A Phosphorylated MAP kina 99.9 7E-28 2.4E-32 257.5 11.8 172 482-663 24-226 (367)
168 2clq_A Mitogen-activated prote 99.9 1.3E-27 4.4E-32 246.9 13.4 168 484-662 23-224 (295)
169 3t9t_A Tyrosine-protein kinase 99.9 6.5E-28 2.2E-32 245.4 11.0 163 483-659 8-201 (267)
170 1ozn_A Reticulon 4 receptor; N 99.9 4.3E-27 1.5E-31 242.2 17.3 233 117-350 31-268 (285)
171 3fdn_A Serine/threonine-protei 99.9 5.3E-28 1.8E-32 248.0 10.4 167 482-662 8-206 (279)
172 2w1i_A JAK2; chromosomal rearr 99.9 7.4E-28 2.5E-32 253.0 11.6 167 483-660 41-245 (326)
173 3lxp_A Non-receptor tyrosine-p 99.9 1.3E-27 4.3E-32 250.4 13.3 165 483-660 31-234 (318)
174 1p4o_A Insulin-like growth fac 99.9 2E-28 6.9E-33 256.5 7.0 173 477-660 19-237 (322)
175 3is5_A Calcium-dependent prote 99.9 5.9E-28 2E-32 248.7 10.3 169 483-662 22-224 (285)
176 2a2a_A Death-associated protei 99.9 7.4E-28 2.5E-32 252.4 11.2 166 483-662 12-217 (321)
177 2eue_A Carbon catabolite derep 99.9 1.1E-27 3.9E-32 245.0 12.2 165 483-662 13-211 (275)
178 3gxj_A TGF-beta receptor type- 99.9 3.4E-28 1.2E-32 252.2 8.3 165 483-659 3-214 (303)
179 3dls_A PAS domain-containing s 99.9 2.9E-28 1E-32 257.1 7.9 168 481-662 22-229 (335)
180 3pfq_A PKC-B, PKC-beta, protei 99.9 6.1E-28 2.1E-32 277.4 10.9 169 481-663 339-542 (674)
181 2owb_A Serine/threonine-protei 99.9 1.1E-27 3.8E-32 252.7 12.0 167 482-662 40-240 (335)
182 2rku_A Serine/threonine-protei 99.9 1.3E-27 4.5E-32 247.0 12.2 166 483-662 15-214 (294)
183 1x8b_A WEE1HU, WEE1-like prote 99.9 1.3E-27 4.5E-32 245.5 12.1 169 482-661 10-229 (289)
184 3llt_A Serine/threonine kinase 99.9 6.6E-28 2.3E-32 256.9 10.1 176 473-662 25-258 (360)
185 1qpc_A LCK kinase; alpha beta 99.9 9.1E-28 3.1E-32 246.2 10.6 164 482-659 12-206 (279)
186 3kex_A Receptor tyrosine-prote 99.9 3E-28 1E-32 255.8 7.1 162 483-658 13-212 (325)
187 1vzo_A Ribosomal protein S6 ki 99.9 2.3E-28 8E-33 260.0 6.3 167 482-662 53-261 (355)
188 3pls_A Macrophage-stimulating 99.9 2E-27 7E-32 245.8 13.2 167 485-663 23-228 (298)
189 3cok_A Serine/threonine-protei 99.9 1E-27 3.6E-32 245.6 10.9 168 482-662 10-211 (278)
190 3n9x_A Phosphotransferase; mal 99.9 1.3E-27 4.4E-32 261.2 12.2 150 482-641 25-177 (432)
191 4fl3_A Tyrosine-protein kinase 99.9 7.2E-28 2.5E-32 274.9 10.5 155 489-658 375-567 (635)
192 2buj_A Serine/threonine-protei 99.9 1.4E-27 4.9E-32 249.5 11.9 174 482-662 28-245 (317)
193 3hko_A Calcium/calmodulin-depe 99.9 4E-28 1.4E-32 256.8 7.8 174 478-662 21-275 (345)
194 3pg1_A Mitogen-activated prote 99.9 1.5E-27 5.2E-32 254.2 12.2 179 475-662 14-233 (362)
195 2izr_A Casein kinase I isoform 99.9 6.1E-28 2.1E-32 254.1 8.9 165 483-663 9-217 (330)
196 3brb_A Proto-oncogene tyrosine 99.9 2.1E-27 7.2E-32 247.8 12.9 174 480-659 31-245 (313)
197 3eqc_A Dual specificity mitoge 99.9 9E-28 3.1E-32 255.9 10.0 168 483-663 33-230 (360)
198 2jam_A Calcium/calmodulin-depe 99.9 1.3E-27 4.5E-32 248.3 11.1 166 483-662 9-206 (304)
199 4fmz_A Internalin; leucine ric 99.9 7.4E-26 2.5E-30 239.7 24.6 241 114-368 84-325 (347)
200 4fmz_A Internalin; leucine ric 99.9 5.9E-26 2E-30 240.4 23.8 279 73-367 66-346 (347)
201 2xir_A Vascular endothelial gr 99.9 7.3E-28 2.5E-32 251.3 8.9 175 474-658 18-245 (316)
202 1t4h_A Serine/threonine-protei 99.9 2.6E-27 8.9E-32 244.3 12.9 171 484-662 27-228 (290)
203 3g33_A Cell division protein k 99.9 1.9E-27 6.5E-32 247.7 11.9 174 481-662 7-218 (308)
204 4g8a_A TOLL-like receptor 4; l 99.9 3.6E-26 1.2E-30 261.4 23.5 134 118-251 52-187 (635)
205 3g2f_A Bone morphogenetic prot 99.9 2.1E-27 7.2E-32 250.3 12.2 171 482-663 12-235 (336)
206 3kfa_A Tyrosine-protein kinase 99.9 1.1E-27 3.8E-32 246.6 9.8 165 481-658 11-207 (288)
207 3zyj_A Leucine-rich repeat-con 99.9 3.1E-26 1E-30 251.0 21.8 219 100-319 70-292 (440)
208 1nxk_A MAP kinase-activated pr 99.9 1.3E-27 4.6E-32 258.2 10.8 167 483-662 61-262 (400)
209 1mqb_A Ephrin type-A receptor 99.9 2.2E-27 7.6E-32 250.2 12.3 163 483-658 44-245 (333)
210 3bhy_A Death-associated protei 99.9 2E-27 6.9E-32 244.0 11.6 165 483-661 5-209 (283)
211 3kk8_A Calcium/calmodulin depe 99.9 2.7E-27 9.2E-32 243.2 12.5 167 482-662 5-206 (284)
212 2qr7_A Ribosomal protein S6 ki 99.9 1E-27 3.6E-32 253.6 9.6 163 482-662 21-219 (342)
213 3bz5_A Internalin-J, INLJ; leu 99.9 1.1E-25 3.6E-30 247.5 25.8 238 113-371 59-303 (457)
214 2h34_A Serine/threonine-protei 99.9 2.2E-27 7.5E-32 247.5 11.7 166 482-661 33-233 (309)
215 3gbz_A Kinase, CMGC CDK; ssgci 99.9 9.5E-28 3.2E-32 252.6 8.9 167 481-662 32-237 (329)
216 3cc6_A Protein tyrosine kinase 99.9 1.7E-27 5.9E-32 244.5 10.7 163 482-658 11-209 (281)
217 3ll6_A Cyclin G-associated kin 99.9 1.8E-27 6.2E-32 250.4 11.1 179 482-662 27-252 (337)
218 1wwl_A Monocyte differentiatio 99.9 5.7E-28 1.9E-32 252.3 7.1 228 109-344 56-310 (312)
219 3mdy_A Bone morphogenetic prot 99.9 2.5E-27 8.6E-32 249.6 12.1 168 480-659 34-248 (337)
220 2vgo_A Serine/threonine-protei 99.9 1.7E-27 5.8E-32 244.9 10.5 166 483-662 14-211 (284)
221 3lij_A Calcium/calmodulin depe 99.9 1.5E-27 5.3E-32 265.2 11.0 166 483-662 37-236 (494)
222 1ozn_A Reticulon 4 receptor; N 99.9 3.3E-26 1.1E-30 235.6 20.2 224 121-368 14-239 (285)
223 2w5a_A Serine/threonine-protei 99.9 1E-27 3.5E-32 245.7 8.8 173 483-661 6-214 (279)
224 2yex_A Serine/threonine-protei 99.9 2E-27 6.8E-32 243.0 10.9 167 482-662 6-207 (276)
225 3nyv_A Calmodulin-domain prote 99.9 1.5E-27 5.2E-32 264.6 10.8 168 482-663 25-227 (484)
226 4aaa_A Cyclin-dependent kinase 99.9 2.2E-27 7.4E-32 250.0 11.3 166 482-661 24-223 (331)
227 3q5i_A Protein kinase; CDPK, m 99.9 3E-27 1E-31 263.5 13.0 167 482-662 35-246 (504)
228 2y7j_A Phosphorylase B kinase 99.9 3.2E-27 1.1E-31 252.2 12.6 171 478-662 89-304 (365)
229 3mtl_A Cell division protein k 99.9 6.8E-28 2.3E-32 253.1 7.1 166 483-662 2-200 (324)
230 1jl5_A Outer protein YOPM; leu 99.9 1.5E-25 5.1E-30 246.0 26.1 221 113-368 148-371 (454)
231 3lzb_A Epidermal growth factor 99.9 2.2E-27 7.4E-32 249.6 10.9 162 483-658 15-214 (327)
232 1u59_A Tyrosine-protein kinase 99.9 3.6E-27 1.2E-31 243.0 12.1 161 484-658 10-208 (287)
233 3op5_A Serine/threonine-protei 99.9 1.1E-27 3.8E-32 255.7 8.6 172 482-663 34-261 (364)
234 2j7t_A Serine/threonine-protei 99.9 1.3E-27 4.5E-32 247.8 8.9 169 481-662 17-221 (302)
235 1ua2_A CAK, cell division prot 99.9 1.2E-27 4.2E-32 253.5 8.8 167 481-661 8-211 (346)
236 2fst_X Mitogen-activated prote 99.9 1.9E-27 6.4E-32 254.1 10.1 171 482-662 28-229 (367)
237 2i1m_A Macrophage colony-stimu 99.9 1.1E-27 3.8E-32 252.2 8.0 168 481-659 44-262 (333)
238 2wqm_A Serine/threonine-protei 99.9 3.9E-27 1.3E-31 245.4 12.1 170 482-662 31-235 (310)
239 3byv_A Rhoptry kinase; malaria 99.9 4.2E-28 1.4E-32 260.2 4.9 177 482-662 72-312 (377)
240 3m2w_A MAP kinase-activated pr 99.9 3.5E-27 1.2E-31 244.7 11.6 167 483-662 17-197 (299)
241 2h6d_A 5'-AMP-activated protei 99.9 2.9E-27 1E-31 241.9 10.9 165 483-661 11-209 (276)
242 3og7_A AKAP9-BRAF fusion prote 99.9 2.4E-27 8.2E-32 244.6 10.3 165 482-662 23-224 (289)
243 3eb0_A Putative uncharacterize 99.9 1.9E-27 6.6E-32 255.6 9.9 175 480-662 4-241 (383)
244 1fvr_A Tyrosine-protein kinase 99.9 2.6E-27 8.9E-32 248.8 10.7 165 483-658 25-236 (327)
245 3dbq_A Dual specificity protei 99.9 2.7E-27 9.4E-32 250.5 10.9 165 483-663 9-220 (343)
246 3mwu_A Calmodulin-domain prote 99.9 2E-27 6.8E-32 263.8 10.1 167 483-663 22-222 (486)
247 3nsz_A CK II alpha, casein kin 99.9 5.1E-27 1.8E-31 246.7 12.7 162 483-662 36-230 (330)
248 2i6l_A Mitogen-activated prote 99.9 4.5E-27 1.5E-31 245.5 12.0 172 483-662 11-224 (320)
249 3a7i_A MST3 kinase, serine/thr 99.9 5.4E-27 1.8E-31 243.5 12.2 166 482-662 21-218 (303)
250 2ycf_A Serine/threonine-protei 99.9 3.6E-27 1.2E-31 247.2 10.6 166 482-662 9-218 (322)
251 1byg_A CSK, protein (C-termina 99.9 1.4E-27 4.9E-32 244.7 7.4 163 482-658 20-209 (278)
252 2a19_B Interferon-induced, dou 99.9 1.8E-27 6.2E-32 244.3 8.2 172 482-661 10-219 (284)
253 2xrw_A Mitogen-activated prote 99.9 7E-27 2.4E-31 250.2 13.0 170 482-662 24-225 (371)
254 1phk_A Phosphorylase kinase; g 99.9 6.1E-27 2.1E-31 242.4 12.1 166 482-661 16-227 (298)
255 2zmd_A Dual specificity protei 99.9 4.9E-27 1.7E-31 253.0 11.8 164 483-662 56-266 (390)
256 1j1b_A Glycogen synthase kinas 99.9 2.1E-27 7.1E-32 258.5 8.9 170 483-662 54-256 (420)
257 1o6v_A Internalin A; bacterial 99.9 1.9E-25 6.4E-30 246.6 24.7 238 114-368 86-345 (466)
258 3mi9_A Cell division protein k 99.9 3.8E-27 1.3E-31 250.1 10.5 174 483-662 17-228 (351)
259 2pml_X PFPK7, Ser/Thr protein 99.9 3.1E-27 1E-31 250.3 9.4 168 482-662 30-251 (348)
260 3qyz_A Mitogen-activated prote 99.9 8.4E-27 2.9E-31 248.9 12.8 170 482-662 26-231 (364)
261 1xbb_A Tyrosine-protein kinase 99.9 5.5E-27 1.9E-31 242.1 10.9 163 483-660 16-218 (291)
262 2vwi_A Serine/threonine-protei 99.9 2E-27 6.7E-32 246.4 7.5 171 481-662 13-226 (303)
263 1o6v_A Internalin A; bacterial 99.9 2E-25 6.7E-30 246.4 23.9 279 74-369 69-368 (466)
264 2yfx_A Tyrosine-protein kinase 99.9 3.9E-27 1.3E-31 247.5 9.6 167 482-659 29-241 (327)
265 4e7w_A Glycogen synthase kinas 99.9 2.1E-27 7.3E-32 256.2 7.6 172 483-663 40-242 (394)
266 2r3i_A Cell division protein k 99.9 8E-27 2.7E-31 241.6 10.9 167 483-662 3-203 (299)
267 2wtk_C Serine/threonine-protei 99.9 1.3E-26 4.4E-31 240.7 12.4 170 482-662 4-212 (305)
268 1b6c_B TGF-B superfamily recep 99.9 1.9E-26 6.6E-31 243.5 13.8 169 479-659 38-253 (342)
269 1csn_A Casein kinase-1; phosph 99.9 1.1E-26 3.7E-31 240.3 11.5 165 483-663 10-218 (298)
270 1zy4_A Serine/threonine-protei 99.9 9.6E-27 3.3E-31 240.9 11.1 172 482-659 5-227 (303)
271 3lm5_A Serine/threonine-protei 99.9 7.1E-27 2.4E-31 245.6 10.1 170 481-662 26-232 (327)
272 3rgf_A Cyclin-dependent kinase 99.9 6.7E-27 2.3E-31 253.4 10.0 167 485-663 22-236 (405)
273 3an0_A Dual specificity mitoge 99.9 7.9E-27 2.7E-31 246.5 10.3 171 481-662 49-256 (340)
274 3com_A Serine/threonine-protei 99.9 1E-26 3.5E-31 242.6 10.9 167 481-662 27-224 (314)
275 3fme_A Dual specificity mitoge 99.9 8.2E-27 2.8E-31 240.3 9.7 171 482-663 6-213 (290)
276 4exu_A Mitogen-activated prote 99.9 1.5E-26 5.3E-31 247.5 11.9 170 482-662 41-241 (371)
277 3q60_A ROP5B; pseudokinase, tr 99.9 3.5E-27 1.2E-31 252.5 6.9 174 482-662 61-292 (371)
278 2v62_A Serine/threonine-protei 99.9 4.6E-27 1.6E-31 249.0 7.5 170 483-663 37-260 (345)
279 2j0j_A Focal adhesion kinase 1 99.9 1.4E-26 4.9E-31 265.2 11.9 164 481-658 388-587 (656)
280 3e3p_A Protein kinase, putativ 99.9 1.3E-26 4.3E-31 246.8 10.7 181 476-662 16-231 (360)
281 3kvw_A DYRK2, dual specificity 99.9 1.7E-26 5.9E-31 251.9 11.9 166 482-661 96-297 (429)
282 2b9h_A MAP kinase FUS3, mitoge 99.9 2.1E-26 7.1E-31 244.4 12.0 170 482-662 10-222 (353)
283 1jl5_A Outer protein YOPM; leu 99.9 1.4E-25 4.9E-30 246.2 19.0 235 108-368 24-271 (454)
284 2x7f_A TRAF2 and NCK-interacti 99.9 4.7E-27 1.6E-31 246.6 6.9 179 477-662 18-233 (326)
285 3coi_A Mitogen-activated prote 99.9 2.1E-26 7.2E-31 244.6 11.8 169 483-662 24-223 (353)
286 2jii_A Serine/threonine-protei 99.9 4.8E-27 1.6E-31 249.5 6.6 163 483-662 42-267 (352)
287 1u46_A ACK-1, activated CDC42 99.9 1E-26 3.5E-31 239.7 8.2 162 483-658 18-219 (291)
288 2z80_A TOLL-like receptor 2, v 99.9 2.9E-26 9.8E-31 243.6 11.1 247 100-347 58-318 (353)
289 2pzi_A Probable serine/threoni 99.9 1.7E-26 5.7E-31 266.8 9.5 168 483-662 80-275 (681)
290 2wei_A Calmodulin-domain prote 99.9 3.9E-26 1.3E-30 235.2 11.2 167 482-662 21-221 (287)
291 3o53_A Protein LRIM1, AGAP0063 99.9 1.8E-27 6.1E-32 249.1 0.9 237 112-362 28-270 (317)
292 2z62_A TOLL-like receptor 4, v 99.9 3.8E-25 1.3E-29 226.6 18.2 206 118-345 28-239 (276)
293 4hgt_A Casein kinase I isoform 99.9 2.6E-26 9E-31 237.1 9.4 168 481-663 7-215 (296)
294 2iwi_A Serine/threonine-protei 99.9 8.5E-27 2.9E-31 243.1 5.2 168 480-661 28-237 (312)
295 1blx_A Cyclin-dependent kinase 99.9 3.2E-26 1.1E-30 240.0 9.6 173 481-661 9-217 (326)
296 3uzp_A CKI-delta, CKID, casein 99.9 4.4E-26 1.5E-30 235.5 10.3 166 482-662 8-214 (296)
297 1wak_A Serine/threonine-protei 99.9 3.5E-26 1.2E-30 246.4 9.5 173 482-663 36-293 (397)
298 2z62_A TOLL-like receptor 4, v 99.9 1.2E-24 4.2E-29 222.8 20.5 215 133-370 21-240 (276)
299 1z57_A Dual specificity protei 99.9 6.4E-26 2.2E-30 238.6 10.5 167 483-663 14-234 (339)
300 3rfs_A Internalin B, repeat mo 99.9 3.8E-25 1.3E-29 226.1 16.0 210 113-354 36-246 (272)
301 3o53_A Protein LRIM1, AGAP0063 99.9 7.1E-26 2.4E-30 237.0 10.6 236 119-367 11-250 (317)
302 3g06_A SSPH2 (leucine-rich rep 99.9 8E-25 2.7E-29 248.0 19.8 284 48-369 13-299 (622)
303 3aln_A Dual specificity mitoge 99.9 1.2E-25 4.2E-30 236.0 11.8 169 483-662 22-228 (327)
304 3oja_A Leucine-rich immune mol 99.9 1.4E-25 4.7E-30 248.7 12.6 193 143-368 35-228 (487)
305 2o6q_A Variable lymphocyte rec 99.9 2.6E-24 8.7E-29 219.8 21.1 181 118-319 37-218 (270)
306 3sv0_A Casein kinase I-like; t 99.9 9.6E-26 3.3E-30 248.7 11.0 167 482-663 6-213 (483)
307 3qa8_A MGC80376 protein; kinas 99.9 3.3E-26 1.1E-30 258.5 6.9 176 483-663 14-223 (676)
308 2vuw_A Serine/threonine-protei 99.9 3.3E-26 1.1E-30 241.4 6.3 154 483-644 20-233 (336)
309 2vx3_A Dual specificity tyrosi 99.9 1.8E-25 6.1E-30 240.2 12.0 170 481-662 52-257 (382)
310 3cek_A Dual specificity protei 99.9 1.3E-25 4.4E-30 234.3 10.3 166 481-662 26-238 (313)
311 3a99_A Proto-oncogene serine/t 99.9 3.8E-26 1.3E-30 239.4 5.9 168 481-662 41-248 (320)
312 3fhr_A MAP kinase-activated pr 99.9 1.7E-25 5.9E-30 236.0 10.9 169 482-662 27-228 (336)
313 2y4i_B KSR2, HKSR2, kinase sup 99.9 3.2E-26 1.1E-30 239.4 4.8 166 480-661 30-241 (319)
314 2o6q_A Variable lymphocyte rec 99.9 1.8E-23 6.2E-28 213.4 23.2 201 120-344 18-219 (270)
315 2eu9_A Dual specificity protei 99.9 3.9E-25 1.3E-29 234.3 10.9 166 483-662 19-238 (355)
316 3p23_A Serine/threonine-protei 99.9 1.4E-25 4.8E-30 244.7 7.3 164 483-663 24-229 (432)
317 2rio_A Serine/threonine-protei 99.9 1.7E-25 5.9E-30 244.4 7.9 164 485-663 17-239 (434)
318 1q8y_A SR protein kinase; tran 99.9 2.4E-25 8.4E-30 237.9 8.3 171 483-662 19-234 (373)
319 2dyl_A Dual specificity mitoge 99.9 5.4E-25 1.8E-29 229.8 10.3 167 482-661 24-227 (318)
320 1p9a_G Platelet glycoprotein I 99.9 1.5E-23 5.3E-28 216.3 20.4 201 114-342 6-207 (290)
321 4azs_A Methyltransferase WBDD; 99.9 1.4E-24 4.8E-29 244.2 12.2 153 491-660 242-435 (569)
322 1p9a_G Platelet glycoprotein I 99.9 2.7E-23 9.2E-28 214.4 20.9 205 137-368 5-209 (290)
323 4glp_A Monocyte differentiatio 99.9 1.1E-23 3.7E-28 219.6 15.6 227 118-368 64-308 (310)
324 3rfs_A Internalin B, repeat mo 99.9 1.6E-23 5.4E-28 214.2 15.5 221 118-372 19-240 (272)
325 2xwt_C Thyrotropin receptor; s 99.9 5.8E-23 2E-27 205.6 15.4 195 119-340 32-236 (239)
326 4glp_A Monocyte differentiatio 99.9 1.5E-23 5.3E-28 218.4 10.7 202 116-343 89-307 (310)
327 3dzo_A Rhoptry kinase domain; 99.9 7.5E-24 2.6E-28 229.9 6.6 178 481-662 76-316 (413)
328 2xwt_C Thyrotropin receptor; s 99.9 1.7E-22 5.7E-27 202.3 15.3 203 133-364 25-236 (239)
329 2ca6_A RAN GTPase-activating p 99.9 1.1E-24 3.7E-29 234.4 -1.4 244 109-368 23-317 (386)
330 1h6u_A Internalin H; cell adhe 99.9 1.9E-22 6.5E-27 210.0 15.6 195 114-344 37-231 (308)
331 3m19_A Variable lymphocyte rec 99.9 8.8E-22 3E-26 198.6 19.8 177 120-320 16-193 (251)
332 3m19_A Variable lymphocyte rec 99.9 1.3E-21 4.3E-26 197.5 20.4 179 143-345 15-194 (251)
333 3g06_A SSPH2 (leucine-rich rep 99.9 4.1E-21 1.4E-25 217.6 26.8 222 108-367 53-274 (622)
334 3goz_A Leucine-rich repeat-con 99.9 2.2E-23 7.6E-28 222.2 7.1 245 101-345 5-299 (362)
335 2ca6_A RAN GTPase-activating p 99.9 2.2E-24 7.4E-29 232.0 -3.0 217 132-368 22-288 (386)
336 3goz_A Leucine-rich repeat-con 99.9 1.3E-23 4.4E-28 224.0 2.0 247 122-368 2-298 (362)
337 3cvr_A Invasion plasmid antige 99.9 1.5E-21 5.1E-26 218.6 16.7 185 119-327 60-251 (571)
338 3en9_A Glycoprotease, O-sialog 99.9 1.2E-22 4E-27 227.3 7.6 157 486-667 339-503 (540)
339 3cvr_A Invasion plasmid antige 99.9 2.7E-21 9.1E-26 216.6 18.0 186 143-352 60-252 (571)
340 2ast_B S-phase kinase-associat 99.9 1.4E-23 4.8E-28 221.0 -0.9 202 112-316 62-282 (336)
341 1h6u_A Internalin H; cell adhe 99.9 1.8E-21 6.3E-26 202.5 15.0 207 124-368 25-231 (308)
342 1z7x_W Ribonuclease inhibitor; 99.9 2.6E-24 8.9E-29 236.7 -7.1 259 109-367 104-411 (461)
343 2o6s_A Variable lymphocyte rec 99.9 1.6E-21 5.6E-26 190.7 13.7 163 117-307 27-190 (208)
344 1zar_A RIO2 kinase; serine kin 99.9 2.4E-21 8.3E-26 198.7 13.9 142 477-644 84-243 (282)
345 2ast_B S-phase kinase-associat 99.8 1E-22 3.5E-27 214.4 2.6 245 119-371 48-310 (336)
346 2o6s_A Variable lymphocyte rec 99.8 1.9E-20 6.3E-25 183.2 16.4 125 122-249 11-136 (208)
347 4ay9_X Follicle-stimulating ho 99.8 1.3E-20 4.3E-25 199.9 16.4 221 118-342 30-258 (350)
348 1z7x_W Ribonuclease inhibitor; 99.8 8.6E-24 2.9E-28 232.5 -8.8 258 110-367 48-354 (461)
349 4ay9_X Follicle-stimulating ho 99.8 7.8E-20 2.7E-24 193.7 18.1 236 121-364 12-256 (350)
350 4b8c_D Glucose-repressible alc 99.8 4.7E-21 1.6E-25 221.9 5.8 232 27-316 130-369 (727)
351 3e6j_A Variable lymphocyte rec 99.8 3.3E-19 1.1E-23 177.2 16.3 134 118-252 40-174 (229)
352 1m9s_A Internalin B; cell inva 99.8 3.9E-20 1.3E-24 209.2 10.8 174 114-321 39-212 (605)
353 1m9s_A Internalin B; cell inva 99.8 1.4E-19 4.8E-24 204.7 15.0 127 114-249 61-187 (605)
354 1h6t_A Internalin B; cell adhe 99.8 2.1E-19 7.1E-24 185.4 14.4 123 116-247 44-166 (291)
355 1h6t_A Internalin B; cell adhe 99.8 2E-19 6.8E-24 185.5 12.7 188 121-344 27-214 (291)
356 2xot_A Amphoterin-induced prot 99.8 4.9E-19 1.7E-23 188.4 13.7 175 121-319 21-202 (361)
357 1zth_A RIO1 serine protein kin 99.8 2.8E-19 9.5E-24 181.1 10.1 139 485-644 49-220 (258)
358 3e6j_A Variable lymphocyte rec 99.8 3.6E-18 1.2E-22 169.7 17.1 151 146-321 23-174 (229)
359 2xot_A Amphoterin-induced prot 99.8 7.9E-19 2.7E-23 186.8 12.9 176 145-344 21-203 (361)
360 1dce_A Protein (RAB geranylger 99.8 9.4E-22 3.2E-26 221.1 -10.9 203 115-360 346-566 (567)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 3.7E-18 1.3E-22 168.5 16.1 131 193-344 35-167 (220)
362 2v9t_B SLIT homolog 2 protein 99.8 2.9E-18 9.8E-23 169.3 15.2 132 167-319 33-165 (220)
363 4b8c_D Glucose-repressible alc 99.8 9.8E-20 3.4E-24 210.9 5.4 219 118-368 173-405 (727)
364 4ezg_A Putative uncharacterize 99.8 1E-18 3.5E-23 169.3 11.0 130 115-248 41-170 (197)
365 2v9t_B SLIT homolog 2 protein 99.8 4.9E-18 1.7E-22 167.6 14.9 134 118-251 32-166 (220)
366 2v70_A SLIT-2, SLIT homolog 2 99.8 5.2E-18 1.8E-22 167.4 14.4 134 119-252 33-168 (220)
367 1xeu_A Internalin C; cellular 99.7 1.1E-18 3.9E-23 177.1 8.6 171 116-321 17-187 (263)
368 4ezg_A Putative uncharacterize 99.7 4.7E-18 1.6E-22 164.7 12.0 154 137-319 39-194 (197)
369 1xeu_A Internalin C; cellular 99.7 4.8E-18 1.7E-22 172.4 9.3 171 140-345 17-187 (263)
370 3ogk_B Coronatine-insensitive 99.7 1.2E-19 4.1E-24 205.9 -7.5 117 181-297 284-422 (592)
371 1dce_A Protein (RAB geranylger 99.7 6.5E-19 2.2E-23 198.0 -2.5 166 108-299 362-550 (567)
372 1w8a_A SLIT protein; signaling 99.7 9.8E-17 3.3E-21 154.7 13.1 129 121-252 11-141 (192)
373 3ogk_B Coronatine-insensitive 99.7 1.6E-19 5.3E-24 205.0 -7.9 254 113-368 159-477 (592)
374 2ell_A Acidic leucine-rich nuc 99.7 7E-17 2.4E-21 152.0 10.4 135 115-251 21-161 (168)
375 2je0_A Acidic leucine-rich nuc 99.7 5.1E-17 1.7E-21 149.7 7.4 129 116-246 15-149 (149)
376 1w8a_A SLIT protein; signaling 99.7 3.9E-17 1.3E-21 157.5 6.9 113 119-231 30-143 (192)
377 2ell_A Acidic leucine-rich nuc 99.7 2.7E-16 9.2E-21 147.9 12.1 136 140-298 22-163 (168)
378 2je0_A Acidic leucine-rich nuc 99.6 8.3E-16 2.8E-20 141.5 9.7 132 140-291 15-149 (149)
379 2o6r_A Variable lymphocyte rec 99.6 3.9E-15 1.3E-19 141.3 13.8 130 120-252 9-139 (177)
380 2wfh_A SLIT homolog 2 protein 99.6 4.4E-15 1.5E-19 143.2 13.6 126 121-250 13-139 (193)
381 4gyi_A RIO2 kinase; protein ki 99.6 1.3E-15 4.5E-20 160.6 8.9 147 484-644 96-266 (397)
382 2wfh_A SLIT homolog 2 protein 99.6 1.4E-14 4.7E-19 139.7 14.5 128 240-368 13-140 (193)
383 2o6r_A Variable lymphocyte rec 99.6 2.5E-14 8.4E-19 135.7 14.5 130 240-369 10-139 (177)
384 1a9n_A U2A', U2A'; complex (nu 99.6 3.1E-15 1.1E-19 141.9 7.4 132 113-249 14-152 (176)
385 1ds9_A Outer arm dynein; leuci 99.5 2.3E-17 7.8E-22 159.9 -8.8 133 113-250 13-153 (198)
386 1ds9_A Outer arm dynein; leuci 99.5 4.4E-17 1.5E-21 157.9 -7.0 154 138-319 14-185 (198)
387 3sb4_A Hypothetical leucine ri 99.5 4.9E-15 1.7E-19 155.3 5.9 101 258-360 226-327 (329)
388 1a9n_A U2A', U2A'; complex (nu 99.5 1.5E-14 5.2E-19 137.1 8.6 109 137-249 14-125 (176)
389 2p1m_B Transport inhibitor res 99.5 4.8E-16 1.6E-20 176.2 -4.5 107 259-366 373-493 (594)
390 3g39_A Variable lymphocyte rec 99.5 1.6E-13 5.4E-18 129.4 12.1 104 121-227 12-115 (170)
391 3sb4_A Hypothetical leucine ri 99.5 1.2E-13 4.2E-18 144.6 12.4 218 117-337 48-328 (329)
392 2r9u_A Variable lymphocyte rec 99.5 3.2E-13 1.1E-17 127.8 12.3 104 121-227 15-118 (174)
393 2p1m_B Transport inhibitor res 99.4 8.2E-16 2.8E-20 174.3 -8.0 246 115-362 102-405 (594)
394 3g39_A Variable lymphocyte rec 99.4 4.5E-13 1.6E-17 126.2 12.1 107 239-345 11-117 (170)
395 2r9u_A Variable lymphocyte rec 99.4 1.3E-12 4.4E-17 123.6 12.0 104 240-343 15-118 (174)
396 2ifg_A High affinity nerve gro 99.3 7.5E-12 2.6E-16 131.9 10.2 78 124-203 14-93 (347)
397 4fdw_A Leucine rich hypothetic 99.3 1.6E-10 5.4E-15 124.1 19.8 238 118-367 113-358 (401)
398 2ifg_A High affinity nerve gro 99.3 1.6E-11 5.4E-16 129.4 11.2 105 145-251 11-117 (347)
399 4fdw_A Leucine rich hypothetic 99.2 4.9E-10 1.7E-14 120.3 20.6 229 112-352 130-367 (401)
400 3tm0_A Aminoglycoside 3'-phosp 99.2 1.5E-11 5.2E-16 124.1 8.0 158 479-653 10-224 (263)
401 3un9_A NLR family member X1; l 99.2 1.6E-13 5.5E-18 146.0 -8.3 62 118-179 72-139 (372)
402 1nd4_A Aminoglycoside 3'-phosp 99.1 4E-11 1.4E-15 120.5 5.5 141 492-654 29-226 (264)
403 3un9_A NLR family member X1; l 99.1 1.3E-12 4.3E-17 139.1 -6.1 87 141-227 71-168 (372)
404 3dxp_A Putative acyl-COA dehyd 98.9 1.5E-09 5E-14 114.9 8.4 154 488-652 43-258 (359)
405 2ra8_A Uncharacterized protein 98.8 7.6E-10 2.6E-14 116.8 1.4 14 138-151 135-148 (362)
406 2ra8_A Uncharacterized protein 98.8 9.2E-10 3.1E-14 116.2 0.6 86 110-198 131-227 (362)
407 4fs7_A Uncharacterized protein 98.6 3E-07 1E-11 98.4 15.5 220 135-364 155-376 (394)
408 4fs7_A Uncharacterized protein 98.6 3.9E-07 1.3E-11 97.5 15.8 241 113-364 66-353 (394)
409 3r70_A Aminoglycoside phosphot 98.5 6.4E-07 2.2E-11 92.9 12.8 147 484-653 38-248 (320)
410 3sg8_A APH(2'')-ID; antibiotic 98.5 3.3E-07 1.1E-11 94.3 10.5 151 488-654 25-235 (304)
411 3rw6_A Nuclear RNA export fact 98.5 1E-08 3.6E-13 102.8 -1.2 67 139-207 167-237 (267)
412 3d1u_A Putative fructosamine-3 98.5 8.3E-07 2.8E-11 90.5 12.0 151 487-651 19-225 (288)
413 1io0_A Tropomodulin; LRR prote 98.4 2.2E-08 7.5E-13 95.3 -0.5 118 110-227 28-164 (185)
414 4gt6_A Cell surface protein; l 98.4 1.7E-05 5.7E-10 84.6 20.3 131 112-246 81-214 (394)
415 3tdw_A Gentamicin resistance p 98.4 2.3E-06 7.7E-11 88.2 12.4 147 488-652 24-234 (306)
416 3rw6_A Nuclear RNA export fact 98.3 1.6E-07 5.6E-12 94.1 3.3 81 115-197 167-258 (267)
417 1io0_A Tropomodulin; LRR prote 98.2 1.2E-07 4.1E-12 90.1 -0.9 118 133-250 27-164 (185)
418 4gt6_A Cell surface protein; l 98.2 7.4E-05 2.5E-09 79.6 19.7 106 112-222 108-213 (394)
419 4h09_A Hypothetical leucine ri 98.1 0.00032 1.1E-08 74.1 22.2 239 113-362 64-341 (379)
420 4gkh_A Aminoglycoside 3'-phosp 98.1 1.4E-05 4.9E-10 80.2 11.0 144 490-651 31-232 (272)
421 3ovc_A Hygromycin-B 4-O-kinase 98.0 9.8E-06 3.3E-10 85.4 9.3 153 487-652 45-253 (362)
422 3ats_A Putative uncharacterize 98.0 4.3E-06 1.5E-10 87.9 5.4 161 488-653 25-263 (357)
423 2olc_A MTR kinase, methylthior 97.8 2.1E-05 7.3E-10 83.9 7.7 45 612-657 227-271 (397)
424 3f7w_A Putative fructosamine-3 97.7 0.00015 5.3E-09 73.5 10.7 78 485-574 17-97 (288)
425 4h09_A Hypothetical leucine ri 97.7 0.003 1E-07 66.5 20.8 240 113-363 41-319 (379)
426 2q83_A YTAA protein; 2635576, 97.7 0.00011 3.6E-09 76.4 9.4 43 612-654 222-264 (346)
427 3e4g_A ATP synthase subunit S, 97.4 4.5E-05 1.5E-09 71.0 2.1 82 143-224 62-149 (176)
428 2pyw_A Uncharacterized protein 97.3 0.0004 1.4E-08 74.6 8.2 44 612-656 232-275 (420)
429 3e4g_A ATP synthase subunit S, 97.1 9.1E-05 3.1E-09 68.9 0.7 84 118-201 61-150 (176)
430 2ppq_A HSK, HK, homoserine kin 96.9 0.002 6.7E-08 66.2 9.0 175 473-653 7-228 (322)
431 3dxq_A Choline/ethanolamine ki 96.9 0.0018 6.2E-08 66.0 8.0 149 488-653 23-213 (301)
432 3jr1_A Putative fructosamine-3 96.8 0.019 6.6E-07 58.6 15.3 144 487-644 40-237 (312)
433 3csv_A Aminoglycoside phosphot 96.7 0.0058 2E-07 63.0 10.0 42 612-653 183-228 (333)
434 1zyl_A Hypothetical protein YI 96.6 0.027 9.2E-07 57.7 14.6 157 489-652 32-233 (328)
435 1nw1_A Choline kinase (49.2 KD 96.6 0.0025 8.7E-08 68.4 6.7 155 488-656 78-321 (429)
436 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00068 2.3E-08 64.2 0.7 115 112-226 35-169 (197)
437 3rfe_A Platelet glycoprotein I 96.2 0.0073 2.5E-07 53.2 6.6 37 283-319 32-68 (130)
438 3feg_A Choline/ethanolamine ki 96.2 0.0053 1.8E-07 64.7 6.5 157 488-657 55-269 (379)
439 3rfe_A Platelet glycoprotein I 96.1 0.0092 3.2E-07 52.5 6.3 11 144-154 33-43 (130)
440 3c5i_A Choline kinase; choline 96.0 0.0036 1.2E-07 65.8 4.1 44 612-656 212-255 (369)
441 2qg7_A Ethanolamine kinase PV0 96.0 0.011 3.8E-07 63.8 7.9 74 488-574 113-188 (458)
442 1pgv_A TMD-1, tropomodulin TMD 95.6 0.0024 8.4E-08 60.4 0.4 88 137-224 36-136 (197)
443 3i1a_A Spectinomycin phosphotr 94.9 0.13 4.4E-06 53.1 11.0 42 612-653 206-247 (339)
444 3f2s_A CK, chetk-alpha, cholin 94.9 0.041 1.4E-06 58.1 7.2 46 612-657 244-295 (401)
445 3mes_A Choline kinase; malaria 93.4 0.049 1.7E-06 58.1 4.2 44 613-657 263-306 (424)
446 3cxl_A N-chimerin; SH2, RHO-GA 87.8 0.068 2.3E-06 57.8 -1.3 61 487-550 146-215 (463)
447 3g15_A CK, chetk-alpha, cholin 85.1 0.94 3.2E-05 47.7 5.8 44 614-657 246-295 (401)
448 2k1k_A Ephrin type-A receptor 80.5 0.39 1.3E-05 31.9 0.3 29 393-421 9-37 (38)
449 2ks1_B Epidermal growth factor 78.7 0.66 2.3E-05 31.8 1.0 15 396-410 13-27 (44)
450 2l2t_A Receptor tyrosine-prote 78.7 0.49 1.7E-05 32.4 0.4 15 396-410 12-26 (44)
451 2jwa_A Receptor tyrosine-prote 67.7 1 3.5E-05 30.8 -0.2 25 396-421 13-37 (44)
452 4ann_A ESSB; membrane protein, 62.5 13 0.00045 35.1 6.3 87 535-641 41-127 (215)
453 4ano_A ESSB; membrane protein, 56.3 17 0.0006 34.3 6.1 51 587-642 82-133 (219)
454 2l34_A TYRO protein tyrosine k 33.2 9.8 0.00034 24.2 0.2 26 393-418 5-30 (33)
455 2k9y_A Ephrin type-A receptor 31.1 17 0.0006 24.1 1.2 6 416-421 34-39 (41)
456 1cja_A Protein (actin-fragmin 27.8 2.5E+02 0.0087 28.2 9.5 143 489-644 75-239 (342)
457 2lz0_A Uncharacterized protein 22.2 1.1E+02 0.0038 24.6 4.8 13 161-173 38-50 (100)
458 2lz0_A Uncharacterized protein 20.7 2.5E+02 0.0085 22.4 6.7 45 154-199 8-52 (100)
459 3kmh_A D-lyxose isomerase; cup 20.6 36 0.0012 32.4 1.5 41 627-671 67-111 (246)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.7e-41 Score=355.13 Aligned_cols=295 Identities=26% Similarity=0.427 Sum_probs=250.4
Q ss_pred CCChHHHHHHHHHHhcCCCCCCCCCccCCCCCCCC--CCCCCccceEeCC----CCEeEEEecCCCCCCCCCCCCccccc
Q 005898 25 QLQSSQTQVLLQLRKHLEYPKQLEIWINHGADFCY--ISSSTQVNITCQD----NFITELKIIGDKPSNVGNFDGFASAN 98 (671)
Q Consensus 25 ~~~~~~~~~Ll~~k~~~~~~~~l~~W~~~~~~~C~--~~~~~~~~v~C~~----~~v~~l~l~~~~~~~~~~~~~~~~~~ 98 (671)
.|.++|++||++||+++.+|..+++|..+ .|||. |. ||+|+. ++|+.+++.+..+.+.
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~-~~~C~~~w~-----gv~C~~~~~~~~l~~L~L~~~~l~~~---------- 65 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPT-TDCCNRTWL-----GVLCDTDTQTYRVNNLDLSGLNLPKP---------- 65 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTT-SCTTTTCST-----TEEECCSSSCCCEEEEEEECCCCSSC----------
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCC-CCCCcCCCc-----ceEeCCCCCCceEEEEECCCCCccCC----------
Confidence 47889999999999999888778899765 78998 75 699964 6788888876543210
Q ss_pred ccCCCccCCCcchhcccCCCCCCEEeccc-ccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCc
Q 005898 99 ASLSENFSIDSFVTTLARLTSLRVLSLVS-LGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNF 177 (671)
Q Consensus 99 ~~l~~n~~~~~~~~~l~~l~~L~~L~L~~-n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 177 (671)
..+|..++++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++|+|++|.
T Consensus 66 ---------~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 136 (313)
T 1ogq_A 66 ---------YPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA 136 (313)
T ss_dssp ---------EECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSE
T ss_pred ---------cccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCc
Confidence 04567788889999999984 88888889889999999999999999988888888899999999999999
Q ss_pred CCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCC-CCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCC
Q 005898 178 FNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRIS-TLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPK 255 (671)
Q Consensus 178 l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~-~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~ 255 (671)
+++.+|..++++++|++|++++|++++.+|..+..++ +|+.|++++|.+++.+|. +..++ |+.|++++|+++
T Consensus 137 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~----- 210 (313)
T 1ogq_A 137 LSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE----- 210 (313)
T ss_dssp EESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE-----
T ss_pred cCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc-----
Confidence 9888888888899999999999999888888888887 889999999988877775 55554 777777666554
Q ss_pred CCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEE
Q 005898 256 LPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFF 335 (671)
Q Consensus 256 ~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l 335 (671)
+.+|..|..+++|+.|++++|++++.+|. +..+++|+.|+|++|++++.+|..+..+++|+.|
T Consensus 211 ----------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 273 (313)
T 1ogq_A 211 ----------------GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSL 273 (313)
T ss_dssp ----------------ECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEE
T ss_pred ----------------CcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEE
Confidence 46778888999999999999999988876 7889999999999999999999999999999999
Q ss_pred ECcCCcCcccCCCCCCCCCCCceeccCCCc-CCC
Q 005898 336 DISNNKLTGGLPSCLSNESDKRVVKFRGNC-LSS 368 (671)
Q Consensus 336 ~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~-l~~ 368 (671)
++++|+++|.+|.. ..+++++.+++.+|. +.|
T Consensus 274 ~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 274 NVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp ECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred ECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 99999999999987 778889999999996 544
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.7e-41 Score=394.78 Aligned_cols=339 Identities=27% Similarity=0.356 Sum_probs=191.1
Q ss_pred hcccCCCChHHHHHHHHHHhcCCCCCCCCCccCCCCCCCCCCCCCccceEeCCCCEeEEEecCCCCCCC--------CCC
Q 005898 20 PLGTHQLQSSQTQVLLQLRKHLEYPKQLEIWINHGADFCYISSSTQVNITCQDNFITELKIIGDKPSNV--------GNF 91 (671)
Q Consensus 20 ~~~~~~~~~~~~~~Ll~~k~~~~~~~~l~~W~~~~~~~C~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~--------~~~ 91 (671)
..+++++.++|++||++||+++.||..+++|..+ .|||.|. ||+|+.++|+++++.+..+.+. ..+
T Consensus 3 ~~~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~-~~~C~w~-----gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L 76 (768)
T 3rgz_A 3 QASPSQSLYREIHQLISFKDVLPDKNLLPDWSSN-KNPCTFD-----GVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSL 76 (768)
T ss_dssp -----CCHHHHHHHHHHHHTTCSCTTSSTTCCTT-SCGGGST-----TEEEETTEEEEEECTTSCCCEEHHHHHHHTTTC
T ss_pred cCccccCCHHHHHHHHHHHhhCCCcccccCCCCC-CCCcCCc-----ceEECCCcEEEEECCCCCcCCccCccChhHhcc
Confidence 3445556678999999999999888788999854 7999986 6999988999999988755431 111
Q ss_pred CCcccccccCCCccCCCcchhcccCCCCCCEEecccccccccCCc--cccCCCCCCEEEcccCcCCCCCCccC-CCCCcc
Q 005898 92 DGFASANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPD--KIHRLYSLEYLDLSSNFLFGSVPPKI-STMVKL 168 (671)
Q Consensus 92 ~~~~~~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~--~~~~L~~L~~L~Ls~N~l~~~~p~~~-~~l~~L 168 (671)
..+.. .+++.+ ....+|..++++++|++|+|++|.+.|.+|. .++++++|++|||++|.+++.+|..+ .++++|
T Consensus 77 ~~L~~--l~~~~~-~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L 153 (768)
T 3rgz_A 77 TGLES--LFLSNS-HINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSL 153 (768)
T ss_dssp TTCCE--EECTTS-CEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTC
T ss_pred Ccccc--cCCcCC-CcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCC
Confidence 10000 001111 0112234555566666666666666555555 55555556666665555555555443 445555
Q ss_pred CEEEccCCcCCCCCCcc---c----------------------CCCCCcCEEEcccccCCCCCcccccCCCCCCEEEecc
Q 005898 169 QTLILDDNFFNNTIPNW---F----------------------DSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSK 223 (671)
Q Consensus 169 ~~L~L~~N~l~~~~p~~---~----------------------~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~ 223 (671)
++|+|++|.+++..|.. + .++++|++|++++|++++.+|. ++++++|++|++++
T Consensus 154 ~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~ 232 (768)
T 3rgz_A 154 EVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISG 232 (768)
T ss_dssp SEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCS
T ss_pred CEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcC
Confidence 55555555544444333 2 3444444455555555444444 55555555555555
Q ss_pred CccccccCC-CCCCCCCCEEECCCCCCCCCCCCC-CCCccEEEcCCCCCCCCchhhhcCC-cccceeecccccccCCCcc
Q 005898 224 NAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKL-PRGLVMAFLSNNSFSGEIPKQYGQL-NQLQQLDMSFNALRGMPPP 300 (671)
Q Consensus 224 N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~-~~~L~~l~l~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~ 300 (671)
|.+++.+|. +..+++|++|++++|++++.+|.. ..+|+.+++++|.+++.+|..+... ++|++|++++|++++.+|.
T Consensus 233 n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~ 312 (768)
T 3rgz_A 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312 (768)
T ss_dssp SCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCG
T ss_pred CcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccch
Confidence 555544442 445555555555555555444433 2345555555555555555555443 5666666666666666665
Q ss_pred ccCCCCCcCeEecccCcCcccCCcc-cCCCCCccEEECcCCcCcccCCCCCCCCC-CCceeccCCCcCCC
Q 005898 301 AIFSLPNISDLNLASNKFSGSLPKN-LNCGGKLVFFDISNNKLTGGLPSCLSNES-DKRVVKFRGNCLSS 368 (671)
Q Consensus 301 ~~~~l~~L~~L~L~~N~l~g~~p~~-~~~~~~L~~l~ls~N~l~g~~p~~~~~~~-~l~~l~l~~N~l~~ 368 (671)
.+..+++|+.|+|++|+++|.+|.. +..+++|+.|++++|+++|.+|..+..++ +++.+++++|.+++
T Consensus 313 ~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~ 382 (768)
T 3rgz_A 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 382 (768)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEE
T ss_pred HHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCC
Confidence 5666666666666666666555544 55555666666666666655665555544 55555555555543
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-39 Score=336.55 Aligned_cols=166 Identities=25% Similarity=0.519 Sum_probs=146.3
Q ss_pred cCCCcCceeccCCceEEEEEEEc------CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC----
Confidence 46778899999999999999863 47889999998776667789999999999999999999999998753
Q ss_pred cccceEEEEEecCCCCChhhhhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENT----------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL 626 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl 626 (671)
..+||||||++|+|.++|+... ....++|.+++.|+.|||+||+|||+. +||||||||+|||+
T Consensus 89 ----~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl 161 (299)
T 4asz_A 89 ----PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLV 161 (299)
T ss_dssp ----SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred ----EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEE
Confidence 6899999999999999997532 235699999999999999999999987 79999999999999
Q ss_pred cCCCcEEEcccCCccccc--------------------------------cccccceeeeeeehh
Q 005898 627 NEHRIAKLSDYGLSIVSE--------------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 627 ~~~~~~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~~ 659 (671)
++++++||+|||+|+... |+||+||++|||+|.
T Consensus 162 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~ 226 (299)
T 4asz_A 162 GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTY 226 (299)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcC
Confidence 999999999999996421 999999999999984
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=336.91 Aligned_cols=166 Identities=25% Similarity=0.488 Sum_probs=144.3
Q ss_pred cCCCcCceeccCCceEEEEEEEc------CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
++|...++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR---- 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----
Confidence 45777889999999999999864 47899999998776667789999999999999999999999998753
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCce
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTP------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNI 624 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~Ni 624 (671)
..+||||||++|+|.++++.... ..+++|.++++|+.|||+||+|||+. +||||||||+||
T Consensus 117 ----~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NI 189 (329)
T 4aoj_A 117 ----PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNC 189 (329)
T ss_dssp ----SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred ----EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhE
Confidence 68999999999999999975422 24699999999999999999999986 799999999999
Q ss_pred eecCCCcEEEcccCCccccc--------------------------------cccccceeeeeeehh
Q 005898 625 LLNEHRIAKLSDYGLSIVSE--------------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 625 Ll~~~~~~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~~ 659 (671)
|+|+++++||+|||+|+... |+||+||++|||+|.
T Consensus 190 Ll~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~ 256 (329)
T 4aoj_A 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTY 256 (329)
T ss_dssp EEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred EECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcC
Confidence 99999999999999997532 999999999999984
No 5
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.3e-39 Score=332.49 Aligned_cols=165 Identities=26% Similarity=0.444 Sum_probs=142.9
Q ss_pred CCCcCceeccCCceEEEEEEEc------CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 484 NFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 484 ~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
.++..+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.+|++++|||||+++|+|.+.+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~---- 102 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ---- 102 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC----
Confidence 3556788999999999999862 46799999997543 334678999999999999999999999998753
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNN 623 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~N 623 (671)
..+||||||++|+|.++|+...+ ...++|.++++|+.|||+||+|||+. +||||||||+|
T Consensus 103 ----~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~N 175 (308)
T 4gt4_A 103 ----PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRN 175 (308)
T ss_dssp ----SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred ----EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccc
Confidence 57999999999999999975321 23599999999999999999999997 79999999999
Q ss_pred eeecCCCcEEEcccCCccccc--------------------------------cccccceeeeeeehh
Q 005898 624 ILLNEHRIAKLSDYGLSIVSE--------------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 624 iLl~~~~~~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~~ 659 (671)
||+|+++++||+|||+|+... |+||+||++|||+|.
T Consensus 176 ILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~ 243 (308)
T 4gt4_A 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 243 (308)
T ss_dssp EEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred eEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhC
Confidence 999999999999999997532 999999999999984
No 6
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=325.70 Aligned_cols=165 Identities=23% Similarity=0.430 Sum_probs=143.9
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++++..+.||+|+||+||+|++.+ .||||+++.. .....++|.+|+++|++++|||||+++|+|.++
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~-------- 104 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-------- 104 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC--------
Confidence 3567788999999999999998753 5999998643 344567899999999999999999999998643
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..+||||||++|+|.++|+... ..++|.+++.|+.|||+||+|||+. +||||||||+|||+|+++++||+|||+
T Consensus 105 -~~~iVmEy~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGl 178 (307)
T 3omv_A 105 -NLAIVTQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGL 178 (307)
T ss_dssp -SCEEEEECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSS
T ss_pred -eEEEEEEcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccC
Confidence 4799999999999999997643 3499999999999999999999986 899999999999999999999999999
Q ss_pred ccccc-----------------------------------cccccceeeeeeehhhhc
Q 005898 640 SIVSE-----------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~~-----------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
|+... |+||+||++|||+||...
T Consensus 179 a~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~P 236 (307)
T 3omv_A 179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236 (307)
T ss_dssp CBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred ceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCC
Confidence 96421 999999999999997543
No 7
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.3e-37 Score=356.85 Aligned_cols=311 Identities=19% Similarity=0.303 Sum_probs=193.6
Q ss_pred hHHHHHHHHHHhcCCCCC---------CCCCccCCCCCCCCCCCCCccceEeC-CCCEeEEEecCCCCCCCCCCCCcccc
Q 005898 28 SSQTQVLLQLRKHLEYPK---------QLEIWINHGADFCYISSSTQVNITCQ-DNFITELKIIGDKPSNVGNFDGFASA 97 (671)
Q Consensus 28 ~~~~~~Ll~~k~~~~~~~---------~l~~W~~~~~~~C~~~~~~~~~v~C~-~~~v~~l~l~~~~~~~~~~~~~~~~~ 97 (671)
..|++||.++++++..+. ...+|+.+ .++|.|. .+.||+|+ .++|++|++.+..+.
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~--~~~GV~C~~~~~V~~L~L~~~~l~----------- 94 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWG--AQPGVSLNSNGRVTGLSLEGFGAS----------- 94 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTT--CCTTEEECTTCCEEEEECTTSCCE-----------
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCccccc--CCCCeEEcCCCCEEEEEecCcccC-----------
Confidence 479999999999986542 23479865 7999982 23479995 468999999776543
Q ss_pred cccCCCccCCCcchhcccCCCCCCEEecccc-------------------------------------------------
Q 005898 98 NASLSENFSIDSFVTTLARLTSLRVLSLVSL------------------------------------------------- 128 (671)
Q Consensus 98 ~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n------------------------------------------------- 128 (671)
+.+|+++++|++|++|+|++|
T Consensus 95 ----------g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~ 164 (636)
T 4eco_A 95 ----------GRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKD 164 (636)
T ss_dssp ----------EEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHH
T ss_pred ----------CcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHH
Confidence 234455666666666666555
Q ss_pred -----------------------------cccccCCccccCCCCCCEEEcccCcCCCC-----------------CCccC
Q 005898 129 -----------------------------GIWGSLPDKIHRLYSLEYLDLSSNFLFGS-----------------VPPKI 162 (671)
Q Consensus 129 -----------------------------~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~-----------------~p~~~ 162 (671)
+++| +|+.|+++++|++|+|++|+++|. +|+.+
T Consensus 165 l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l 243 (636)
T 4eco_A 165 CINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDL 243 (636)
T ss_dssp HHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCC
T ss_pred HhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhh
Confidence 2334 566666666666666666666654 66666
Q ss_pred C--CCCccCEEEccCCcCCCCCCcccCCCCCcCEEEccccc-CCC-CCcccccCC------CCCCEEEeccCccccccCC
Q 005898 163 S--TMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNK-LAG-PFPSSIQRI------STLSDLDLSKNAISGSLPD 232 (671)
Q Consensus 163 ~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~g-~~p~~l~~l------~~L~~L~Ls~N~l~g~~p~ 232 (671)
+ ++++|++|+|++|.+.+.+|..++++++|++|++++|+ ++| .+|..++++ ++|+.|++++|+++ .+|.
T Consensus 244 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~ 322 (636)
T 4eco_A 244 KWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPV 322 (636)
T ss_dssp CGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCC
T ss_pred hhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCc
Confidence 6 66666666666666666666666666666666666665 665 566666554 66666666666666 3443
Q ss_pred ---CCCCCCCCEEECCCCCCCCCCCCC--CCCccEEEcCCCCCCCCchhhhcCCcc-cceeecccccccCCCccccCCCC
Q 005898 233 ---LSSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGEIPKQYGQLNQ-LQQLDMSFNALRGMPPPAIFSLP 306 (671)
Q Consensus 233 ---~~~l~~L~~L~Ls~N~l~~~~p~~--~~~L~~l~l~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~ 306 (671)
++.+++|+.|++++|+++|.+|.+ ..+|+.+++++|+++ .+|..++.+++ |+.|++++|.++ .+|..+..++
T Consensus 323 ~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~ 400 (636)
T 4eco_A 323 ETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKS 400 (636)
T ss_dssp HHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTC
T ss_pred hhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcc
Confidence 566666666666666666666622 134566666666665 55666666666 666666666666 3334444433
Q ss_pred --CcCeEecccCcCcccCCcccC-------CCCCccEEECcCCcCcccCCCCC-CCCCCCceeccCCCcCC
Q 005898 307 --NISDLNLASNKFSGSLPKNLN-------CGGKLVFFDISNNKLTGGLPSCL-SNESDKRVVKFRGNCLS 367 (671)
Q Consensus 307 --~L~~L~L~~N~l~g~~p~~~~-------~~~~L~~l~ls~N~l~g~~p~~~-~~~~~l~~l~l~~N~l~ 367 (671)
+|+.|++++|++++.+|..+. .+.+|+.|++++|+++ .+|..+ ..+++++.+++++|.++
T Consensus 401 l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~ 470 (636)
T 4eco_A 401 VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT 470 (636)
T ss_dssp SSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS
T ss_pred cCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC
Confidence 566666666666666666555 5556666666666666 344432 33555666666666655
No 8
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.4e-37 Score=359.56 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=126.4
Q ss_pred chhcccCCCCCCEEecccccccc-----------------cCCcccc--CCCCCCEEEcccCcCCCCCCccCCCCCccCE
Q 005898 110 FVTTLARLTSLRVLSLVSLGIWG-----------------SLPDKIH--RLYSLEYLDLSSNFLFGSVPPKISTMVKLQT 170 (671)
Q Consensus 110 ~~~~l~~l~~L~~L~L~~n~l~g-----------------~~p~~~~--~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (671)
+|..+++|++|++|+|++|.++| .+|+.++ ++++|++|+|++|++.+.+|..|+++++|++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 44555555555555555555555 2555544 5555555555555555555555555555555
Q ss_pred EEccCCc-CCC-CCCcccCCCC-------CcCEEEcccccCCCCCcc--cccCCCCCCEEEeccCccccccCCCCCCCCC
Q 005898 171 LILDDNF-FNN-TIPNWFDSLP-------SLTFLSMRNNKLAGPFPS--SIQRISTLSDLDLSKNAISGSLPDLSSLGSL 239 (671)
Q Consensus 171 L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~g~~p~--~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L 239 (671)
|+|++|+ ++| .+|..+++++ +|++|+|++|+++ .+|. .++++++|+.|+|++|.++ .+|.+..+++|
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L 597 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKL 597 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcc
Confidence 5555554 554 4554443333 5555555555555 4555 5555555555555555555 44455555555
Q ss_pred CEEECCCCCCCCCCCCCC---CC-ccEEEcCCCCCCCCchhhhcCCcc--cceeecccccccCCCcccc---C--CCCCc
Q 005898 240 NVLNLSDNKLDSNLPKLP---RG-LVMAFLSNNSFSGEIPKQYGQLNQ--LQQLDMSFNALRGMPPPAI---F--SLPNI 308 (671)
Q Consensus 240 ~~L~Ls~N~l~~~~p~~~---~~-L~~l~l~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~~~~~---~--~l~~L 308 (671)
+.|+|++|+++ .+|... .. |+.|++++|.++ .+|..+..++. |+.|+|++|++++.+|... . .+++|
T Consensus 598 ~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L 675 (876)
T 4ecn_A 598 TDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINA 675 (876)
T ss_dssp SEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCE
T ss_pred eEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCc
Confidence 55555555555 333221 23 555555555555 44554444432 5555555555555443211 1 22355
Q ss_pred CeEecccCcCcccCCccc-CCCCCccEEECcCCcCcccCCCCCCCCC--------CCceeccCCCcCC
Q 005898 309 SDLNLASNKFSGSLPKNL-NCGGKLVFFDISNNKLTGGLPSCLSNES--------DKRVVKFRGNCLS 367 (671)
Q Consensus 309 ~~L~L~~N~l~g~~p~~~-~~~~~L~~l~ls~N~l~g~~p~~~~~~~--------~l~~l~l~~N~l~ 367 (671)
+.|+|++|+++ .+|..+ ..+++|+.|+|++|+++ .+|..+.... +|+.|++++|.++
T Consensus 676 ~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~ 741 (876)
T 4ecn_A 676 STVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT 741 (876)
T ss_dssp EEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC
T ss_pred CEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc
Confidence 55555555555 334332 24455555555555555 4444332211 4555555555554
No 9
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.4e-37 Score=326.37 Aligned_cols=169 Identities=21% Similarity=0.396 Sum_probs=144.3
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|+..+.||+|+||+||+|+.. +|+.||||++... .....+.+.+|+++|++++|||||++++++.+.+
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~------- 96 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG------- 96 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC-------
Confidence 57899999999999999999964 7999999999654 2344678999999999999999999999998754
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..|+|||||++|+|.+++.... ...+++.+...++.||+.||+|||+. +||||||||+|||+++++.+||+|||+
T Consensus 97 -~~yiVmEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 97 -SLYIVMDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp -EEEEEEECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred -EEEEEEeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEccccc
Confidence 7899999999999999997543 23578999999999999999999997 899999999999999999999999999
Q ss_pred ccccc------------------------------cccccceeeeeeehhhhcc
Q 005898 640 SIVSE------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 640 a~~~~------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
|+... |+||+||++|||++|....
T Consensus 172 a~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF 225 (350)
T 4b9d_A 172 ARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF 225 (350)
T ss_dssp ESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSC
T ss_pred ceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 97654 9999999999999986543
No 10
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.8e-38 Score=327.74 Aligned_cols=166 Identities=23% Similarity=0.366 Sum_probs=148.9
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccce
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 561 (671)
..|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+.+ .
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--------~ 145 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--------E 145 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT--------E
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--------E
Confidence 56888999999999999999965 79999999997554444567899999999999999999999998764 7
Q ss_pred EEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCcc
Q 005898 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~ 641 (671)
.|||||||++|+|.+++... .+++.+...++.||+.||+|||+. +||||||||+|||+++++.+||+|||+|+
T Consensus 146 ~~ivmEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 146 LWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EEEEECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCce
Confidence 89999999999999999753 389999999999999999999997 89999999999999999999999999997
Q ss_pred ccc------------------------------cccccceeeeeeehhhhcc
Q 005898 642 VSE------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 642 ~~~------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
.+. |+||+||++|||++|....
T Consensus 219 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF 270 (346)
T 4fih_A 219 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270 (346)
T ss_dssp ECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred ecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 542 9999999999999986543
No 11
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.9e-37 Score=320.83 Aligned_cols=168 Identities=17% Similarity=0.370 Sum_probs=141.0
Q ss_pred CCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccceEE
Q 005898 484 NFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (671)
Q Consensus 484 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~~ 563 (671)
++.+.++||+|+||+||+|++ +|+.||||++..... ....++.|+..+.+++|||||+++|+|.+.+. .....+
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~----~~~~~~ 77 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNG----TWTQLW 77 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS----SSEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC----CceEEE
Confidence 466788999999999999998 589999999965432 22234456666788999999999999986531 123689
Q ss_pred EEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC-----CCCccccCCCCCceeecCCCcEEEcccC
Q 005898 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV-----IPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 564 Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-----~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
||||||++|+|.++++.. .++|.++.+++.|+|+||+|||+++ .++||||||||+|||+|+++++||+|||
T Consensus 78 lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 999999999999999864 3899999999999999999999863 4689999999999999999999999999
Q ss_pred Ccccc----------------------------------------ccccccceeeeeeehhhh
Q 005898 639 LSIVS----------------------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 639 la~~~----------------------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
+|+.. .|+||+||++|||+|+..
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~ 216 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 216 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCC
Confidence 98532 199999999999998743
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.4e-37 Score=319.25 Aligned_cols=167 Identities=23% Similarity=0.366 Sum_probs=149.0
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..++||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~------ 105 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE------ 105 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC------
Confidence 46999999999999999999964 79999999996432 233577999999999999999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..|+||||+++|+|.+++.... .+++.+...++.||+.||+|||++ +|+||||||+|||+++++.+||+|||
T Consensus 106 --~~yivmEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 106 --KLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp --EEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred --EEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 7899999999999999998643 389999999999999999999997 89999999999999999999999999
Q ss_pred Cccccc--------------------------------cccccceeeeeeehhhhcc
Q 005898 639 LSIVSE--------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 639 la~~~~--------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
+|+... |+||+||++|+|++|....
T Consensus 178 la~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF 234 (311)
T 4aw0_A 178 TAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234 (311)
T ss_dssp TCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 997532 9999999999999986654
No 13
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6.9e-37 Score=314.19 Aligned_cols=170 Identities=24% Similarity=0.359 Sum_probs=144.8
Q ss_pred CcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccceE
Q 005898 486 DMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (671)
Q Consensus 486 ~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 562 (671)
+..++||+|+||+||+|+.. ++..||||++... .....+.|.+|+++|++++|||||+++++|.+... .....
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~----~~~~~ 104 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK----GKKCI 104 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEET----TEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccC----CCcEE
Confidence 55678999999999999965 6899999999643 23446789999999999999999999999865311 11368
Q ss_pred EEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC-CCcEEEcccCCcc
Q 005898 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-HRIAKLSDYGLSI 641 (671)
Q Consensus 563 ~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~ki~DfGla~ 641 (671)
|||||||++|+|.+++.... .+++.....++.||+.||+|||++. ++||||||||+|||+++ ++.+||+|||+|+
T Consensus 105 ~lvmEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999999998643 4899999999999999999999863 35999999999999984 7999999999997
Q ss_pred ccc---------------------------cccccceeeeeeehhhhcc
Q 005898 642 VSE---------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 642 ~~~---------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
..+ |+||+||++|||+||....
T Consensus 181 ~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf 229 (290)
T 3fpq_A 181 LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPY 229 (290)
T ss_dssp GCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred eCCCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 533 9999999999999986543
No 14
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5.6e-37 Score=329.13 Aligned_cols=166 Identities=23% Similarity=0.369 Sum_probs=149.4
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.+.|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||+++++|.+.+
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-------- 221 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-------- 221 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT--------
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC--------
Confidence 356889999999999999999965 79999999997655445567899999999999999999999998764
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla 640 (671)
.+|||||||++|+|.+++... .+++.+...++.||+.||+|||++ +||||||||+|||+++++.+||+|||+|
T Consensus 222 ~~~iVmEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla 294 (423)
T 4fie_A 222 ELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 294 (423)
T ss_dssp EEEEEEECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccc
Confidence 789999999999999999753 389999999999999999999997 8999999999999999999999999999
Q ss_pred cccc------------------------------cccccceeeeeeehhhhc
Q 005898 641 IVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 641 ~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+.+. |+||+||++|||++|...
T Consensus 295 ~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P 346 (423)
T 4fie_A 295 AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346 (423)
T ss_dssp EECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred eECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 7542 999999999999998654
No 15
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.9e-36 Score=349.62 Aligned_cols=264 Identities=31% Similarity=0.450 Sum_probs=166.1
Q ss_pred cchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCC
Q 005898 109 SFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDS 188 (671)
Q Consensus 109 ~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 188 (671)
.+|..+.++++|++|+|++|.+.+.+|..++++++|++|+|++|.+++.+|..+..+++|++|+|++|++++.+|.++++
T Consensus 409 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 488 (768)
T 3rgz_A 409 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488 (768)
T ss_dssp ECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGG
T ss_pred ccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhc
Confidence 34444445555555555555555555555555555555555555555455555555555555555555555555555555
Q ss_pred CCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCC---C-----
Q 005898 189 LPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPR---G----- 259 (671)
Q Consensus 189 l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~---~----- 259 (671)
+++|++|++++|++++.+|..++.+++|+.|+|++|+++|.+|. +..+++|+.|++++|+++|.+|.... .
T Consensus 489 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~ 568 (768)
T 3rgz_A 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCS
T ss_pred CCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhh
Confidence 55555555555555555555555555555555555555544442 44455555555555555544442100 0
Q ss_pred -----------------------------------------ccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCC
Q 005898 260 -----------------------------------------LVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMP 298 (671)
Q Consensus 260 -----------------------------------------L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 298 (671)
+..++++.|.++|.+|..++.+++|+.|||++|+++|.+
T Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~i 648 (768)
T 3rgz_A 569 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYI 648 (768)
T ss_dssp TTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCC
T ss_pred ccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccC
Confidence 001122224444444555556778899999999999999
Q ss_pred ccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCCCcCC
Q 005898 299 PPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSNVQN 372 (671)
Q Consensus 299 ~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~~~ 372 (671)
|..++.+++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..++.|+.+++++|.++|.+|.
T Consensus 649 p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~ 722 (768)
T 3rgz_A 649 PKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCS
T ss_pred CHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876553
No 16
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9.4e-37 Score=322.24 Aligned_cols=176 Identities=24% Similarity=0.413 Sum_probs=150.6
Q ss_pred CHHHHHHHhcCCCcCceeccCCceEEEEEEEc------CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCC-CCccccc
Q 005898 474 TLEELKEATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRH-PHLVCLL 545 (671)
Q Consensus 474 ~~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H-~niv~l~ 545 (671)
..++++...++|+..+.||+|+||+||+|++. +++.||||++.... ....++|.+|+++|.+++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 44556666788999999999999999999854 23689999997654 3346789999999999976 8999999
Q ss_pred ceeecCCCCCCcccceEEEEEecCCCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhcCCCCC
Q 005898 546 GHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENT-------------PGKVLNWSERLAVLIGVAKAVQFLHTGVIP 612 (671)
Q Consensus 546 g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~ 612 (671)
|+|.+.+ +..++|||||++|+|.++|+... ....++|.+++.++.|||+||+|||+.
T Consensus 135 g~~~~~~-------~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~--- 204 (353)
T 4ase_A 135 GACTKPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--- 204 (353)
T ss_dssp EEECCTT-------SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred EEEEecC-------CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---
Confidence 9997643 25799999999999999997532 134589999999999999999999997
Q ss_pred CccccCCCCCceeecCCCcEEEcccCCccccc--------------------------------cccccceeeeeeehh
Q 005898 613 GFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE--------------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 613 ~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~~ 659 (671)
+||||||||+|||+++++++||+|||+|+... |+||+||++|||+|.
T Consensus 205 ~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~ 283 (353)
T 4ase_A 205 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 283 (353)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred CeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhC
Confidence 79999999999999999999999999997532 999999999999984
No 17
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.8e-36 Score=316.44 Aligned_cols=163 Identities=23% Similarity=0.292 Sum_probs=143.4
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.+.|+..++||+|+||+||+|+.. +|+.||||+++.... ..+|+.+|++++|||||++++++.+.+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~-------- 123 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP-------- 123 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT--------
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC--------
Confidence 346778889999999999999965 799999999975432 246999999999999999999998764
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC-cEEEcccCC
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-IAKLSDYGL 639 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~ki~DfGl 639 (671)
..|||||||++|+|.++++..+ .+++.+...++.||+.||+|||++ +||||||||+|||++.++ .+||+|||+
T Consensus 124 ~~~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGl 197 (336)
T 4g3f_A 124 WVNIFMELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGH 197 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTT
T ss_pred EEEEEEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCC
Confidence 7899999999999999998653 499999999999999999999997 899999999999999987 699999999
Q ss_pred ccccc-----------------------------------cccccceeeeeeehhhhcc
Q 005898 640 SIVSE-----------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 640 a~~~~-----------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
|+... |+||+||++|||++|....
T Consensus 198 a~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf 256 (336)
T 4g3f_A 198 ALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256 (336)
T ss_dssp CEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCC
Confidence 96421 9999999999999986543
No 18
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5e-36 Score=305.15 Aligned_cols=166 Identities=24% Similarity=0.409 Sum_probs=141.0
Q ss_pred cCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~------ 86 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD------ 86 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC------
Confidence 5799999999999999999995 479999999996542 233567999999999999999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..|+||||+ +|+|.+++.... .+++.+...++.||+.||+|||++ +|+||||||+|||+++++++||+|||
T Consensus 87 --~~~ivmEy~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFG 157 (275)
T 3hyh_A 87 --EIIMVIEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp --EEEEEEECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSS
T ss_pred --EEEEEEeCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecC
Confidence 789999999 689999997654 499999999999999999999997 89999999999999999999999999
Q ss_pred Cccccc------------------------------cccccceeeeeeehhhhcc
Q 005898 639 LSIVSE------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 639 la~~~~------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
+|+... |+||+||++|+|++|....
T Consensus 158 la~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF 212 (275)
T 3hyh_A 158 LSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 212 (275)
T ss_dssp CC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCC
Confidence 997532 9999999999999986543
No 19
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.7e-36 Score=309.81 Aligned_cols=173 Identities=21% Similarity=0.411 Sum_probs=142.2
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC----
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD---- 556 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~---- 556 (671)
++|+..+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+....
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45888999999999999999965 79999999996443 3345779999999999999999999999876431100
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
......|+|||||++|+|.+++.........++.....++.||++||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 01124799999999999999998755444567888899999999999999997 899999999999999999999999
Q ss_pred cCCcccc-----------------------c-------------------cccccceeeeeeeh
Q 005898 637 YGLSIVS-----------------------E-------------------DINSVGVRLLILMS 658 (671)
Q Consensus 637 fGla~~~-----------------------~-------------------d~~s~g~~l~~~~~ 658 (671)
||+|+.. . |+||+||++|||++
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~ 225 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc
Confidence 9998642 0 99999999999996
No 20
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.9e-37 Score=314.96 Aligned_cols=167 Identities=27% Similarity=0.433 Sum_probs=140.9
Q ss_pred cCCCcCceeccCCceEEEEEEE----cCCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL----ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
++|+..+.||+|+||+||+|+. .+++.||||+++... ......+.+|+++|++++|||||++++++.+.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 99 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG---- 99 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----
Confidence 4688999999999999999985 247899999996542 223346889999999999999999999998764
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..|+|||||++|+|.+++.... .+++.+...++.||+.||+|||+. +|+||||||+|||+++++.+||+|
T Consensus 100 ----~~~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 100 ----KLYLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp ----EEEEEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEES
T ss_pred ----EEEEEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecc
Confidence 7899999999999999998654 389999999999999999999997 899999999999999999999999
Q ss_pred cCCccccc------------------------------cccccceeeeeeehhhhcc
Q 005898 637 YGLSIVSE------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 637 fGla~~~~------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
||+|+... |+||+||++|||++|....
T Consensus 170 FGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF 226 (304)
T 3ubd_A 170 FGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226 (304)
T ss_dssp SEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCC
Confidence 99997532 9999999999999986543
No 21
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.1e-33 Score=305.31 Aligned_cols=268 Identities=22% Similarity=0.261 Sum_probs=179.0
Q ss_pred CCCccCCCcchhcccCCCCCCEEecccccccccC-CccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCC
Q 005898 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSL-PDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (671)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~-p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (671)
++.|...+..|..++++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|.++++|++|+|++|.++
T Consensus 37 Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 116 (455)
T 3v47_A 37 LSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLD 116 (455)
T ss_dssp CCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCB
T ss_pred ecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCC
Confidence 3444333334555666666666666666665444 344666666666666666666655666666666666666666666
Q ss_pred CCCCcc--cCCCCCcCEEEcccccCCCCCccc-ccCCCCCCEEEeccCccccccCC-C----------------------
Q 005898 180 NTIPNW--FDSLPSLTFLSMRNNKLAGPFPSS-IQRISTLSDLDLSKNAISGSLPD-L---------------------- 233 (671)
Q Consensus 180 ~~~p~~--~~~l~~L~~L~L~~N~l~g~~p~~-l~~l~~L~~L~Ls~N~l~g~~p~-~---------------------- 233 (671)
+.+|.. +.++++|++|++++|++++..|.. +.++++|++|++++|.+++..|. +
T Consensus 117 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~ 196 (455)
T 3v47_A 117 GAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMN 196 (455)
T ss_dssp THHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCS
T ss_pred ccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccc
Confidence 544433 666666666666666666555554 56666666666666666554442 1
Q ss_pred ------------CCCCCCCEEECCCCCCCCCCCC------------------------------------------CCCC
Q 005898 234 ------------SSLGSLNVLNLSDNKLDSNLPK------------------------------------------LPRG 259 (671)
Q Consensus 234 ------------~~l~~L~~L~Ls~N~l~~~~p~------------------------------------------~~~~ 259 (671)
..+++|+.|++++|++++..|. ...+
T Consensus 197 ~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (455)
T 3v47_A 197 EYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASG 276 (455)
T ss_dssp TTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSC
T ss_pred hhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccC
Confidence 1335677777777766432110 0135
Q ss_pred ccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcC
Q 005898 260 LVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISN 339 (671)
Q Consensus 260 L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~ 339 (671)
++.+++++|.+++.+|..++.+++|+.|++++|++++.+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++
T Consensus 277 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred ceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 77778888888777777888888888888888888888777777888888888888888777777777788888888888
Q ss_pred CcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 340 NKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 340 N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
|++++..|..+..+++|+.+++++|.+++
T Consensus 357 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 357 NHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CcccccChhhccccccccEEECCCCcccc
Confidence 88887777777778888888888887775
No 22
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-34 Score=304.57 Aligned_cols=172 Identities=19% Similarity=0.326 Sum_probs=146.8
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|+..+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+++|++++|||||++++++.....- ...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~--~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY--GEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCT--TTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccc--ccC
Confidence 46889999999999999999964 79999999996543 33456788999999999999999999988653210 012
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..+|||||||+ |+|.+++.... .+++.+...++.||+.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 46899999996 78999997643 499999999999999999999997 899999999999999999999999999
Q ss_pred ccccc-----------------------------------cccccceeeeeeehhhhcc
Q 005898 640 SIVSE-----------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 640 a~~~~-----------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
|+.+. |+||+||++|||++|....
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF 263 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSS
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCC
Confidence 96421 9999999999999987544
No 23
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=8.1e-34 Score=298.77 Aligned_cols=277 Identities=19% Similarity=0.222 Sum_probs=182.5
Q ss_pred CChHHHHHHHHHHhcC-CCC-CCCCCcc---CCCCCCCCCCCCCccceEeCCCCEeEEEecCCCCCCCCCCCCccccccc
Q 005898 26 LQSSQTQVLLQLRKHL-EYP-KQLEIWI---NHGADFCYISSSTQVNITCQDNFITELKIIGDKPSNVGNFDGFASANAS 100 (671)
Q Consensus 26 ~~~~~~~~Ll~~k~~~-~~~-~~l~~W~---~~~~~~C~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~ 100 (671)
+..+|++||++||+.+ .++ ..+.+|. ....++|.|. |+.|..-.
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~-----g~~~~~~~-------------------------- 72 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRT-----GRALKATA-------------------------- 72 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSH-----HHHHHHHH--------------------------
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccC-----CcchhhhH--------------------------
Confidence 4468999999999987 355 3456784 3346789885 58884100
Q ss_pred CCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCC
Q 005898 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNN 180 (671)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 180 (671)
. . -.-...+.++.|+|++|.+. .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++
T Consensus 73 --~-----~--l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~- 140 (328)
T 4fcg_A 73 --D-----L--LEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR- 140 (328)
T ss_dssp --H-----H--HHHHTSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-
T ss_pred --H-----H--HhcccccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-
Confidence 0 0 00112345667777777775 66666777777777777777776 66777777777777777777776
Q ss_pred CCCcccCCCCCcCEEEcccccCCCCCcccccC---------CCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCC
Q 005898 181 TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQR---------ISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDS 251 (671)
Q Consensus 181 ~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~---------l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~ 251 (671)
.+|..++++++|++|++++|++.+.+|..+.. +++|+.|+|++|.++..++.+..+++|++|+|++|++++
T Consensus 141 ~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 141 ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC
T ss_pred cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc
Confidence 66777777777777777777777777766554 777777777777776333346666666666666665542
Q ss_pred CCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCC
Q 005898 252 NLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGK 331 (671)
Q Consensus 252 ~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~ 331 (671)
+|..++.+++|+.|++++|++.+.+|..+..+++|+.|+|++|++.+.+|..+..+++
T Consensus 221 ----------------------l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~ 278 (328)
T 4fcg_A 221 ----------------------LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQ 278 (328)
T ss_dssp ----------------------CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTT
T ss_pred ----------------------CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCC
Confidence 3445666666666666666666666666666677777777776666666766666667
Q ss_pred ccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCC
Q 005898 332 LVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (671)
Q Consensus 332 L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (671)
|+.|++++|++.+.+|..++++++++.+.+..|.+.
T Consensus 279 L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 279 LEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 777777777776677776666666666666655443
No 24
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.98 E-value=5.6e-33 Score=311.24 Aligned_cols=169 Identities=24% Similarity=0.400 Sum_probs=146.0
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc------hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK------KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 554 (671)
.++|+..++||+|+||+||+|+.. +|+.||||++.+.. .....+.++++++++.++|||||++++++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 357999999999999999999965 79999999996432 111233445577888999999999999998764
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEE
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki 634 (671)
.+|+|||||++|+|..++.... .+++.....++.||+.||+|||+. +||||||||+|||+|++|.+||
T Consensus 266 ------~lylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 266 ------KLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp ------EEEEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEE
T ss_pred ------EEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEe
Confidence 7999999999999999998653 389999999999999999999997 8999999999999999999999
Q ss_pred cccCCccccc-----------------------------cccccceeeeeeehhhhccc
Q 005898 635 SDYGLSIVSE-----------------------------DINSVGVRLLILMSFFFGSM 664 (671)
Q Consensus 635 ~DfGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~~~ 664 (671)
+|||+|+... |+||+||++|||++|.....
T Consensus 334 ~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~ 392 (689)
T 3v5w_A 334 SDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392 (689)
T ss_dssp CCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred cccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999997543 99999999999999876653
No 25
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=296.26 Aligned_cols=258 Identities=19% Similarity=0.206 Sum_probs=139.4
Q ss_pred hhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCC
Q 005898 111 VTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLP 190 (671)
Q Consensus 111 ~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 190 (671)
+..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.+++
T Consensus 49 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 128 (477)
T 2id5_A 49 QDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY 128 (477)
T ss_dssp TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred HhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccc
Confidence 44555555555555555555555555555555555555555555543334455555555555555555555555555555
Q ss_pred CcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCC------------------
Q 005898 191 SLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDS------------------ 251 (671)
Q Consensus 191 ~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~------------------ 251 (671)
+|++|++++|++++..|..|..+++|+.|+|++|.+++..+. +..+++|+.|++++|.+++
T Consensus 129 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 208 (477)
T 2id5_A 129 NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS 208 (477)
T ss_dssp TCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEE
T ss_pred cCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCC
Confidence 555555555555554455555555555555555555543332 4444555555555554443
Q ss_pred ------CCCCC---CCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccC
Q 005898 252 ------NLPKL---PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSL 322 (671)
Q Consensus 252 ------~~p~~---~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~ 322 (671)
.+|.. ..+|+.+++++|.+++..+..+..+++|+.|+|++|.+++.++..+..+++|+.|+|++|++++..
T Consensus 209 ~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 288 (477)
T 2id5_A 209 HWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVE 288 (477)
T ss_dssp CCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEEC
T ss_pred CCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceEC
Confidence 33321 124555555555555433345555555666666666555555555555555666666666555555
Q ss_pred CcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 323 PKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 323 p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
|..+..+++|+.|++++|++++..+..+..+++++.+++++|.+.+
T Consensus 289 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 289 PYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred HHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 5555555556666666665554444444555555555555555543
No 26
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.97 E-value=1.7e-32 Score=291.39 Aligned_cols=143 Identities=19% Similarity=0.348 Sum_probs=125.8
Q ss_pred HHhcCCCcCceeccCCceEEEEEEEc----CCcEEEEEEccCCchhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCC
Q 005898 480 EATNNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 480 ~~~~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 554 (671)
...+.|+..+.||+|+||+||+|+.+ +++.||||++..... ..++.+|+++|..+ +|||||++++++.+.+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~-- 93 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKND-- 93 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETT--
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECC--
Confidence 34577999999999999999999742 467899999865432 35688999999998 6999999999998753
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCC-CcEE
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-RIAK 633 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~k 633 (671)
..|+||||+++|+|.+++. .+++.+...++.|++.||+|||+. +|+||||||+|||++.+ +.+|
T Consensus 94 ------~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 94 ------HVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp ------EEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEE
T ss_pred ------EEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEE
Confidence 7899999999999999984 288999999999999999999997 89999999999999977 7999
Q ss_pred EcccCCcc
Q 005898 634 LSDYGLSI 641 (671)
Q Consensus 634 i~DfGla~ 641 (671)
|+|||+|+
T Consensus 159 l~DFGla~ 166 (361)
T 4f9c_A 159 LVDFGLAQ 166 (361)
T ss_dssp ECCCTTCE
T ss_pred ECcCCCCc
Confidence 99999985
No 27
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.97 E-value=2.9e-32 Score=306.93 Aligned_cols=169 Identities=24% Similarity=0.423 Sum_probs=150.3
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.++|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+.+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-------- 227 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN-------- 227 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--------
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--------
Confidence 367999999999999999999965 79999999998766666778999999999999999999999998753
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCC--CcEEEcccC
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH--RIAKLSDYG 638 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~--~~~ki~DfG 638 (671)
..|+|||||++|+|.+++.... ..+++.+...++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 228 ~~~iv~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 228 EMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEEEEECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEEEEeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecc
Confidence 7899999999999999986532 3489999999999999999999997 89999999999999854 899999999
Q ss_pred Cccccc-----------------------------cccccceeeeeeehhhhcc
Q 005898 639 LSIVSE-----------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 639 la~~~~-----------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
+|+.++ |+||+||++|||++|....
T Consensus 303 ~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf 356 (573)
T 3uto_A 303 LTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356 (573)
T ss_dssp SCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred ceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 997542 9999999999999987643
No 28
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=6.2e-31 Score=289.27 Aligned_cols=252 Identities=19% Similarity=0.205 Sum_probs=229.3
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCC-CccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEE
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSV-PPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLS 196 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 196 (671)
++|++|+|++|.+.+..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 67999999999999999999999999999999999998666 56799999999999999999999999999999999999
Q ss_pred cccccCCCCCccc--ccCCCCCCEEEeccCccccccCC--CCCCCCCCEEECCCCCCCCCCCCCC---------------
Q 005898 197 MRNNKLAGPFPSS--IQRISTLSDLDLSKNAISGSLPD--LSSLGSLNVLNLSDNKLDSNLPKLP--------------- 257 (671)
Q Consensus 197 L~~N~l~g~~p~~--l~~l~~L~~L~Ls~N~l~g~~p~--~~~l~~L~~L~Ls~N~l~~~~p~~~--------------- 257 (671)
+++|++++.+|.. +..+++|++|+|++|.+++..|. +..+++|++|++++|++++..|...
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999877766 99999999999999999998776 7899999999999999988766421
Q ss_pred ----------------------CCccEEEcCCCCCCCCchhhhcCC----------------------------------
Q 005898 258 ----------------------RGLVMAFLSNNSFSGEIPKQYGQL---------------------------------- 281 (671)
Q Consensus 258 ----------------------~~L~~l~l~~N~l~~~~p~~~~~l---------------------------------- 281 (671)
.+|+.+++++|.+++.+|..+...
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 358889999999988777665432
Q ss_pred -----cccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCC
Q 005898 282 -----NQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDK 356 (671)
Q Consensus 282 -----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l 356 (671)
++|+.|++++|.+++.+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|.+++..|..+..+++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 589999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred ceeccCCCcCCCC
Q 005898 357 RVVKFRGNCLSSN 369 (671)
Q Consensus 357 ~~l~l~~N~l~~~ 369 (671)
+.+++++|.+++.
T Consensus 350 ~~L~Ls~N~l~~~ 362 (455)
T 3v47_A 350 EVLDLSYNHIRAL 362 (455)
T ss_dssp CEEECCSSCCCEE
T ss_pred CEEECCCCccccc
Confidence 9999999998754
No 29
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=5.7e-32 Score=282.80 Aligned_cols=232 Identities=28% Similarity=0.454 Sum_probs=212.9
Q ss_pred CCCCEEecccccccc--cCCccccCCCCCCEEEccc-CcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCE
Q 005898 118 TSLRVLSLVSLGIWG--SLPDKIHRLYSLEYLDLSS-NFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTF 194 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g--~~p~~~~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (671)
.+++.|+|++|.+.| .+|..|+++++|++|+|++ |.+.+.+|..|.++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 468999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEcccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCC-CCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCC
Q 005898 195 LSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLG-SLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSG 272 (671)
Q Consensus 195 L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~-~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~ 272 (671)
|++++|++++.+|..+..+++|++|++++|.+++.+|. +..++ +|+.|++++|+++ +
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~---------------------~ 188 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT---------------------G 188 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEE---------------------E
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeee---------------------c
Confidence 99999999999999999999999999999999988774 77776 7888888777654 4
Q ss_pred CchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCC
Q 005898 273 EIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSN 352 (671)
Q Consensus 273 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~ 352 (671)
.+|..+..++ |+.|++++|.+++.+|..+..+++|+.|+|++|++++.+|. +..+++|+.|++++|+++|.+|..+..
T Consensus 189 ~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 266 (313)
T 1ogq_A 189 KIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQ 266 (313)
T ss_dssp ECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGG
T ss_pred cCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhc
Confidence 6677888887 99999999999999999999999999999999999988777 788899999999999999999999999
Q ss_pred CCCCceeccCCCcCCCCcCC
Q 005898 353 ESDKRVVKFRGNCLSSNVQN 372 (671)
Q Consensus 353 ~~~l~~l~l~~N~l~~~~~~ 372 (671)
+++++.+++++|.+++..+.
T Consensus 267 l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 267 LKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp CTTCCEEECCSSEEEEECCC
T ss_pred CcCCCEEECcCCcccccCCC
Confidence 99999999999999876543
No 30
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1.3e-30 Score=296.93 Aligned_cols=256 Identities=20% Similarity=0.199 Sum_probs=212.7
Q ss_pred Ccchh-cccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCccc
Q 005898 108 DSFVT-TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWF 186 (671)
Q Consensus 108 ~~~~~-~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 186 (671)
..+|+ .+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|
T Consensus 64 ~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~ 143 (597)
T 3oja_B 64 RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIF 143 (597)
T ss_dssp SEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHh
Confidence 34444 46889999999999999988888899999999999999999988888888999999999999999996666667
Q ss_pred CCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCC-------------------CCCEEECCCC
Q 005898 187 DSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLG-------------------SLNVLNLSDN 247 (671)
Q Consensus 187 ~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~-------------------~L~~L~Ls~N 247 (671)
+++++|++|+|++|.+++..|..|..+++|+.|+|++|.+++.. +..++ +|+.|++++|
T Consensus 144 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n 221 (597)
T 3oja_B 144 HNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHN 221 (597)
T ss_dssp TTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSS
T ss_pred ccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCccccccCCchhheeeccCC
Confidence 89999999999999999888888999999999999999988653 22333 4555555555
Q ss_pred CCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccC
Q 005898 248 KLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLN 327 (671)
Q Consensus 248 ~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~ 327 (671)
.++...+..+.+|+.|++++|.+++ +..++.+++|+.|+|++|.+++.+|..+..+++|+.|+|++|.+++ +|..+.
T Consensus 222 ~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~ 298 (597)
T 3oja_B 222 SINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQ 298 (597)
T ss_dssp CCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSS
T ss_pred cccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccc
Confidence 5554444455678899999999986 4678899999999999999999988899999999999999999986 577777
Q ss_pred CCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCCC
Q 005898 328 CGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSN 369 (671)
Q Consensus 328 ~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 369 (671)
.+++|+.|+|++|.++ .+|..+..+++|+.|++++|.+++.
T Consensus 299 ~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~ 339 (597)
T 3oja_B 299 PIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 339 (597)
T ss_dssp CCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred cCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc
Confidence 7889999999999998 6777777888899999999988753
No 31
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=3.3e-31 Score=303.70 Aligned_cols=254 Identities=20% Similarity=0.266 Sum_probs=221.3
Q ss_pred chhccc--CCCCCCEEecccccccccCCccccCCCCCCEEEcccCc-CCC-CCCccCCCC------CccCEEEccCCcCC
Q 005898 110 FVTTLA--RLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNF-LFG-SVPPKISTM------VKLQTLILDDNFFN 179 (671)
Q Consensus 110 ~~~~l~--~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~ 179 (671)
+|..++ ++++|++|+|++|.+.|.+|+.|+++++|++|+|++|+ ++| .+|..++++ ++|++|+|++|.++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 889988 99999999999999999999999999999999999998 988 899888876 99999999999999
Q ss_pred CCCCc--ccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCC-CCEEECCCCCCCCCCCCC
Q 005898 180 NTIPN--WFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGS-LNVLNLSDNKLDSNLPKL 256 (671)
Q Consensus 180 ~~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~-L~~L~Ls~N~l~~~~p~~ 256 (671)
.+|. .++++++|++|++++|+++|.+| .++.+++|+.|++++|.++..++.+..+++ |+.|++++|+++ .+|..
T Consensus 319 -~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~ 395 (636)
T 4eco_A 319 -TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNI 395 (636)
T ss_dssp -SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSC
T ss_pred -ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchh
Confidence 8898 89999999999999999999999 899999999999999999944445888888 999999999998 66654
Q ss_pred C-----CCccEEEcCCCCCCCCchhhhc-------CCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCc
Q 005898 257 P-----RGLVMAFLSNNSFSGEIPKQYG-------QLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPK 324 (671)
Q Consensus 257 ~-----~~L~~l~l~~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~ 324 (671)
. .+|+.+++++|.+++.+|..+. .+++|+.|++++|+++..++..+..+++|+.|+|++|+++ .+|.
T Consensus 396 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~ 474 (636)
T 4eco_A 396 FDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPK 474 (636)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCS
T ss_pred hhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCH
Confidence 2 2688999999999999998888 7789999999999999777766777899999999999998 6666
Q ss_pred ccCCCC--------CccEEECcCCcCcccCCCCCC--CCCCCceeccCCCcCCC
Q 005898 325 NLNCGG--------KLVFFDISNNKLTGGLPSCLS--NESDKRVVKFRGNCLSS 368 (671)
Q Consensus 325 ~~~~~~--------~L~~l~ls~N~l~g~~p~~~~--~~~~l~~l~l~~N~l~~ 368 (671)
...... +|+.|++++|+++ .+|..+. .+++++.+++++|.+++
T Consensus 475 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 475 NSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK 527 (636)
T ss_dssp SSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred HHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC
Confidence 543322 8889999999998 7888776 88889999999998885
No 32
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=8.8e-30 Score=290.51 Aligned_cols=295 Identities=19% Similarity=0.211 Sum_probs=198.9
Q ss_pred CEeEEEecCCCCCCCC--CCCCcc-cccccCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcc
Q 005898 74 FITELKIIGDKPSNVG--NFDGFA-SANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLS 150 (671)
Q Consensus 74 ~v~~l~l~~~~~~~~~--~~~~~~-~~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls 150 (671)
.++.+++.++...+.. .+.+.. ....+++.|...+..|..|.++++|++|+|++|.+.+..|+.|+++++|++|+|+
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 4666777665543221 122111 1223455555444556678888888888888888888888888888888888888
Q ss_pred cCcCCCCCCccCCCCCccCEEEccCCcCCC-CCCcccCCCCCcCEEEcccccCCCCCcccccCCC---------------
Q 005898 151 SNFLFGSVPPKISTMVKLQTLILDDNFFNN-TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRIS--------------- 214 (671)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~--------------- 214 (671)
+|.+++..|..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..++.++
T Consensus 113 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~ 192 (606)
T 3vq2_A 113 ETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP 192 (606)
T ss_dssp TSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCC
T ss_pred CCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCC
Confidence 888887777788888888888888888876 5788888888888888888887765444332211
Q ss_pred --------------------------------------------------------------------------------
Q 005898 215 -------------------------------------------------------------------------------- 214 (671)
Q Consensus 215 -------------------------------------------------------------------------------- 214 (671)
T Consensus 193 l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 272 (606)
T 3vq2_A 193 IDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTN 272 (606)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCT
T ss_pred cceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccc
Confidence
Q ss_pred -----------------------------------CCCEEEeccCccccccCC---------------------CCCCCC
Q 005898 215 -----------------------------------TLSDLDLSKNAISGSLPD---------------------LSSLGS 238 (671)
Q Consensus 215 -----------------------------------~L~~L~Ls~N~l~g~~p~---------------------~~~l~~ 238 (671)
+|+.|++++|.+ +.+|. +..+++
T Consensus 273 ~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~ 351 (606)
T 3vq2_A 273 DFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPS 351 (606)
T ss_dssp TCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTT
T ss_pred cccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCC
Confidence 122222222222 11110 122344
Q ss_pred CCEEECCCCCCCCC-------------------------CC-CC--CCCccEEEcCCCCCCCCch-hhhcCCcccceeec
Q 005898 239 LNVLNLSDNKLDSN-------------------------LP-KL--PRGLVMAFLSNNSFSGEIP-KQYGQLNQLQQLDM 289 (671)
Q Consensus 239 L~~L~Ls~N~l~~~-------------------------~p-~~--~~~L~~l~l~~N~l~~~~p-~~~~~l~~L~~L~L 289 (671)
|++|++++|++++. +| .+ ..+|+.+++++|.+++..| ..+..+++|+.|++
T Consensus 352 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 431 (606)
T 3vq2_A 352 LSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDI 431 (606)
T ss_dssp CCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEEC
T ss_pred CCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEEC
Confidence 44455554444322 11 11 2456777777777777766 57778888888888
Q ss_pred ccccccCCCccccCCCCCcCeEecccCcCcc-cCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 290 SFNALRGMPPPAIFSLPNISDLNLASNKFSG-SLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 290 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g-~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
++|.+++.+|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++|++++..|..+..+++++.+++++|.+++
T Consensus 432 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 511 (606)
T 3vq2_A 432 SYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLF 511 (606)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCC
Confidence 8888888877778888888888888888877 367777778888888888888887777777778888888888887775
Q ss_pred C
Q 005898 369 N 369 (671)
Q Consensus 369 ~ 369 (671)
.
T Consensus 512 ~ 512 (606)
T 3vq2_A 512 L 512 (606)
T ss_dssp E
T ss_pred c
Confidence 4
No 33
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=6.7e-30 Score=291.47 Aligned_cols=255 Identities=20% Similarity=0.192 Sum_probs=146.1
Q ss_pred hcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCc-ccCCCC
Q 005898 112 TTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPN-WFDSLP 190 (671)
Q Consensus 112 ~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~ 190 (671)
..+.++++|++|+|++|.+. .+|+.+.++++|++|++++|.+.+..|..+.++++|++|++++|.+.+.+|. .+..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 34555666666666666554 4555566666666666666666555555556666666666666665555543 255566
Q ss_pred CcCEEEcccccCCCCC--cccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCC----CCCccEE
Q 005898 191 SLTFLSMRNNKLAGPF--PSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKL----PRGLVMA 263 (671)
Q Consensus 191 ~L~~L~L~~N~l~g~~--p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~----~~~L~~l 263 (671)
+|++|++++|++++.. |..+..+++|+.|++++|.+++..|. +..+++|+.|++++|++++..|.. ..+|+.+
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 6666666666655443 44555566666666666665555443 455566666666666555543321 2455566
Q ss_pred EcCCCCCCCCchhhhcCCcccceeecccccccCC---CccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCC
Q 005898 264 FLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGM---PPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNN 340 (671)
Q Consensus 264 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N 340 (671)
++++|.+++..|..++.+++|++|++++|++++. .+..+..+++|+.|++++|++++..|..+..+++|+.|++++|
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 510 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCC
Confidence 6666666555555556666666666666665542 1234555566666666666666555555555666666666666
Q ss_pred cCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 341 KLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 341 ~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
++++..|..+..++.+ .+++++|.+++
T Consensus 511 ~l~~~~~~~l~~l~~L-~L~L~~N~l~~ 537 (606)
T 3t6q_A 511 RLTSSSIEALSHLKGI-YLNLASNHISI 537 (606)
T ss_dssp CCCGGGGGGGTTCCSC-EEECCSSCCCC
T ss_pred ccCcCChhHhCccccc-EEECcCCcccc
Confidence 6665555555555555 56666665553
No 34
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=1.2e-29 Score=290.27 Aligned_cols=128 Identities=23% Similarity=0.177 Sum_probs=83.7
Q ss_pred cCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCC
Q 005898 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (671)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (671)
+++.|......+.+|.++++|++|+|++|.|.+..|+.|.+|++|++|+|++|+|++..|..|.++++|++|+|++|+++
T Consensus 58 dLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~ 137 (635)
T 4g8a_A 58 DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 137 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCC
T ss_pred EeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCC
Confidence 35555443333446677777777777777776666666777777777777777776555556677777777777777776
Q ss_pred CCCCcccCCCCCcCEEEcccccCCC-CCcccccCCCCCCEEEeccCccc
Q 005898 180 NTIPNWFDSLPSLTFLSMRNNKLAG-PFPSSIQRISTLSDLDLSKNAIS 227 (671)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~l~~l~~L~~L~Ls~N~l~ 227 (671)
+..+..|+++++|++|++++|++++ .+|..++.+++|++|++++|+++
T Consensus 138 ~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 138 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccc
Confidence 6555566777777777777777654 35666666677777766666553
No 35
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=5.2e-30 Score=276.32 Aligned_cols=255 Identities=20% Similarity=0.208 Sum_probs=202.9
Q ss_pred Ccchhc-ccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCccc
Q 005898 108 DSFVTT-LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWF 186 (671)
Q Consensus 108 ~~~~~~-l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 186 (671)
..+|.. +.++++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|
T Consensus 58 ~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~ 137 (390)
T 3o6n_A 58 RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIF 137 (390)
T ss_dssp SEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred hhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHh
Confidence 445544 6889999999999999988888889999999999999999988778888999999999999999985444557
Q ss_pred CCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCC-------------------CCEEECCCC
Q 005898 187 DSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGS-------------------LNVLNLSDN 247 (671)
Q Consensus 187 ~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~-------------------L~~L~Ls~N 247 (671)
.++++|++|++++|++++..|..+..+++|+.|++++|.+++.. +..+++ |+.|++++|
T Consensus 138 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n 215 (390)
T 3o6n_A 138 HNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHN 215 (390)
T ss_dssp TTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSS
T ss_pred cCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccccccCCCCcceEEECCCC
Confidence 88999999999999998877888999999999999999887642 333444 555555555
Q ss_pred CCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccC
Q 005898 248 KLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLN 327 (671)
Q Consensus 248 ~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~ 327 (671)
.++........+|+.+++++|.+++. ..++.+++|+.|++++|.+++.+|..+..+++|+.|+|++|++++ +|..+.
T Consensus 216 ~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~ 292 (390)
T 3o6n_A 216 SINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQ 292 (390)
T ss_dssp CCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSS
T ss_pred eeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccC
Confidence 55444334456788888888888763 567888888888888888888888888888888888888888875 566667
Q ss_pred CCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 328 CGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 328 ~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
.+++|+.|++++|+++ .+|..+..+++++.+++++|.++.
T Consensus 293 ~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 293 PIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 332 (390)
T ss_dssp CCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred CCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce
Confidence 7788888888888887 566667777888888888888764
No 36
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.97 E-value=6.3e-31 Score=276.23 Aligned_cols=185 Identities=32% Similarity=0.580 Sum_probs=161.7
Q ss_pred ccccCHHHHHHHhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCch-hhHHHHHHHHHHHhcCCCCCccccccee
Q 005898 470 CRSFTLEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHC 548 (671)
Q Consensus 470 ~~~~~~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~ 548 (671)
...++++++....++|+..+.||+|+||.||+|+..+|+.||||++..... .....+.+|++++++++||||++++++|
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456888999999999999999999999999999988899999999975432 2234689999999999999999999999
Q ss_pred ecCCCCCCcccceEEEEEecCCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec
Q 005898 549 IDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN 627 (671)
Q Consensus 549 ~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~ 627 (671)
.+.+ ..++||||+++|+|.+++.... ....++|..+..++.+++.||+|||+.+.++|+||||||+||+++
T Consensus 97 ~~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 97 MTPT--------ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168 (326)
T ss_dssp CCSS--------CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC
T ss_pred ecCC--------ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC
Confidence 8653 5689999999999999998643 334599999999999999999999998777899999999999999
Q ss_pred CCCcEEEcccCCccccc-------------------------------cccccceeeeeeehhhhc
Q 005898 628 EHRIAKLSDYGLSIVSE-------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 628 ~~~~~ki~DfGla~~~~-------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+++.+||+|||+++... |+||+||++|+|+++...
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 234 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA 234 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCc
Confidence 99999999999986421 999999999999997654
No 37
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=2.1e-29 Score=287.30 Aligned_cols=268 Identities=21% Similarity=0.185 Sum_probs=210.3
Q ss_pred cCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCC
Q 005898 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (671)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (671)
+++.|...+..|..|.++++|++|+|++|.+.+..|+.|+++++|++|+|++|++++..|..|+++++|++|+|++|.++
T Consensus 39 ~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 118 (606)
T 3t6q_A 39 EFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGIS 118 (606)
T ss_dssp ECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCS
T ss_pred EccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcc
Confidence 45555555555678888888889998888888888888888888889999888888888888888888888888888888
Q ss_pred CCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCC--EEECCCCCCCCCCCCC
Q 005898 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLN--VLNLSDNKLDSNLPKL 256 (671)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~--~L~Ls~N~l~~~~p~~ 256 (671)
+..|..++++++|++|++++|++++..++.+..+++|+.|++++|.+++..|. +..+++|+ .|++++|.+++..|..
T Consensus 119 ~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~ 198 (606)
T 3t6q_A 119 SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGA 198 (606)
T ss_dssp CGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTT
T ss_pred cCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhH
Confidence 76677788888888888888888864434444588888888888888877654 67777777 7888888887765543
Q ss_pred CC------------------------------------------------------CccEEEcCCCCCCCCchhhhcCCc
Q 005898 257 PR------------------------------------------------------GLVMAFLSNNSFSGEIPKQYGQLN 282 (671)
Q Consensus 257 ~~------------------------------------------------------~L~~l~l~~N~l~~~~p~~~~~l~ 282 (671)
.. .++.+++++|.+++..+..|+.++
T Consensus 199 ~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~ 278 (606)
T 3t6q_A 199 FDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFS 278 (606)
T ss_dssp TTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCT
T ss_pred hhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhcccc
Confidence 21 456777888888877777788888
Q ss_pred ccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCC-CCCCCCCceecc
Q 005898 283 QLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSC-LSNESDKRVVKF 361 (671)
Q Consensus 283 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~-~~~~~~l~~l~l 361 (671)
+|++|++++|+++.. |..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+++.+|.. +..+++++.+++
T Consensus 279 ~L~~L~l~~n~l~~l-p~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l 357 (606)
T 3t6q_A 279 GLQELDLTATHLSEL-PSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDL 357 (606)
T ss_dssp TCSEEECTTSCCSCC-CSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEEC
T ss_pred CCCEEeccCCccCCC-ChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEEC
Confidence 888888888888844 446778888888888888888777777888888888888888887777654 677788888888
Q ss_pred CCCcCCC
Q 005898 362 RGNCLSS 368 (671)
Q Consensus 362 ~~N~l~~ 368 (671)
++|.+++
T Consensus 358 ~~n~l~~ 364 (606)
T 3t6q_A 358 SHDDIET 364 (606)
T ss_dssp CSSCCCE
T ss_pred CCCcccc
Confidence 8887764
No 38
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=1.5e-29 Score=296.01 Aligned_cols=248 Identities=21% Similarity=0.277 Sum_probs=124.1
Q ss_pred chhccc--CCCCCCEEecccccccccCCccccCCCCCCEEEcccCc-CCC-CCCccCCCCC-------ccCEEEccCCcC
Q 005898 110 FVTTLA--RLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNF-LFG-SVPPKISTMV-------KLQTLILDDNFF 178 (671)
Q Consensus 110 ~~~~l~--~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l 178 (671)
+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|++|+|++|.+
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 555555 66666666666666666666666666666666666665 555 4554433333 555555555555
Q ss_pred CCCCCc--ccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCC-CCEEECCCCCCC-----
Q 005898 179 NNTIPN--WFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGS-LNVLNLSDNKLD----- 250 (671)
Q Consensus 179 ~~~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~-L~~L~Ls~N~l~----- 250 (671)
+ .+|. .++++++|+.|+|++|+++ .+| .++.+++|+.|+|++|.++..++.+..+++ |+.|+|++|+++
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~ 637 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNI 637 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCCSCCSC
T ss_pred C-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCCcCchh
Confidence 5 4555 5555555555555555555 455 555555555555555555522223444544 555555555544
Q ss_pred --------------------CCCCCCC--------CCccEEEcCCCCCCCCchhh-hcCCcccceeecccccccCCCccc
Q 005898 251 --------------------SNLPKLP--------RGLVMAFLSNNSFSGEIPKQ-YGQLNQLQQLDMSFNALRGMPPPA 301 (671)
Q Consensus 251 --------------------~~~p~~~--------~~L~~l~l~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~~~~ 301 (671)
+.+|.++ .+|+.|++++|.++ .+|.. +..+++|+.|+|++|+++..++..
T Consensus 638 ~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~ 716 (876)
T 4ecn_A 638 FNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENS 716 (876)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTS
T ss_pred hhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHH
Confidence 4333322 13444445555444 23322 234455555555555555333322
Q ss_pred cCC-------CCCcCeEecccCcCcccCCcccC--CCCCccEEECcCCcCcccCCCCCCCCCCCceeccCC
Q 005898 302 IFS-------LPNISDLNLASNKFSGSLPKNLN--CGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRG 363 (671)
Q Consensus 302 ~~~-------l~~L~~L~L~~N~l~g~~p~~~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~ 363 (671)
+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|++++
T Consensus 717 ~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp SSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCC
T ss_pred hccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCC
Confidence 221 124555555555554 4444443 44555555555555554 444444555555555544
No 39
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=5.6e-29 Score=278.57 Aligned_cols=131 Identities=21% Similarity=0.262 Sum_probs=84.2
Q ss_pred CCCCCCCEEECCCCCCCCCCCCC---CCCccEEEcCCCCCCC--CchhhhcCCcccceeecccccccC-CCccccCCCCC
Q 005898 234 SSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNNSFSG--EIPKQYGQLNQLQQLDMSFNALRG-MPPPAIFSLPN 307 (671)
Q Consensus 234 ~~l~~L~~L~Ls~N~l~~~~p~~---~~~L~~l~l~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~ 307 (671)
..+++|++|++++|++++.+|.. ...|+.+++++|++++ .+|..++.+++|++|++++|.+++ .++..+..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 45566666666666666655532 2456666677776665 455666666677777777777666 33334566666
Q ss_pred cCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCC
Q 005898 308 ISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (671)
Q Consensus 308 L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (671)
|+.|++++|++++.+|..+. .+|+.||+++|+++ .+|..+..+++++.+++++|.++
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC
Confidence 77777777776666665543 56677777777776 66666666677777777777666
No 40
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.96 E-value=3e-29 Score=296.76 Aligned_cols=296 Identities=20% Similarity=0.217 Sum_probs=236.0
Q ss_pred CCEeEEEecCCCCCCCC--CCCCcc-cccccCCCccCCCcc-hhcccCCCCCCEEecccccccccCCccccCCCCCCEEE
Q 005898 73 NFITELKIIGDKPSNVG--NFDGFA-SANASLSENFSIDSF-VTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLD 148 (671)
Q Consensus 73 ~~v~~l~l~~~~~~~~~--~~~~~~-~~~~~l~~n~~~~~~-~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~ 148 (671)
..++.|++.++...+.. .+..+. ....+++.|.....+ |..|.++++|++|+|++|.+.+..|+.|+++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 45777887766543221 122111 122345555444555 67788899999999999988888888899999999999
Q ss_pred cccCcCCCCCCcc--CCCCCccCEEEccCCcCCCCCC-cccCCCCCcCEEEcccccCCCCCcccccCC--CCCCEEEecc
Q 005898 149 LSSNFLFGSVPPK--ISTMVKLQTLILDDNFFNNTIP-NWFDSLPSLTFLSMRNNKLAGPFPSSIQRI--STLSDLDLSK 223 (671)
Q Consensus 149 Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l--~~L~~L~Ls~ 223 (671)
|++|.+++.+|.. |.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+..+ ++|+.|+++.
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~ 183 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCC
Confidence 9999888766665 8888999999999998887655 578889999999999998888888888777 7888888888
Q ss_pred CccccccCC-CCCCCC------CCEEECCCCCCCCCCCCC----------------------------------------
Q 005898 224 NAISGSLPD-LSSLGS------LNVLNLSDNKLDSNLPKL---------------------------------------- 256 (671)
Q Consensus 224 N~l~g~~p~-~~~l~~------L~~L~Ls~N~l~~~~p~~---------------------------------------- 256 (671)
|.+.+..|. +..+++ |+.|++++|.+++.+|..
T Consensus 184 n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l 263 (844)
T 3j0a_A 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263 (844)
T ss_dssp SBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTT
T ss_pred CccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhcc
Confidence 888876653 444443 899999999876654421
Q ss_pred -CCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEE
Q 005898 257 -PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFF 335 (671)
Q Consensus 257 -~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l 335 (671)
..+++.+++++|.+++..|..|..+++|+.|+|++|++++.+|..+..+++|+.|+|++|++++..|..+..+++|+.|
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 343 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYI 343 (844)
T ss_dssp TTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEE
T ss_pred ccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEE
Confidence 1468889999999998888889999999999999999999999889999999999999999998888899999999999
Q ss_pred ECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 336 DISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 336 ~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
++++|.+++..+..+..+++|+.|++++|.+++
T Consensus 344 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 344 DLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp ECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred ECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 999999988777788888899999999888764
No 41
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.96 E-value=8.3e-31 Score=274.83 Aligned_cols=178 Identities=35% Similarity=0.692 Sum_probs=156.3
Q ss_pred CHHHHHHHhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCC
Q 005898 474 TLEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGG 553 (671)
Q Consensus 474 ~~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 553 (671)
.+.++...+++|+..+.||+|+||.||+|+..+|+.||||++........+++.+|++++++++||||++++++|.+.+
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 108 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN- 108 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT-
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC-
Confidence 3344556788999999999999999999998889999999987665556788999999999999999999999987653
Q ss_pred CCCcccceEEEEEecCCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcE
Q 005898 554 RDDYAVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIA 632 (671)
Q Consensus 554 ~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ 632 (671)
..++||||+++|+|.+++.... ....++|.++..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 109 -------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~ 178 (321)
T 2qkw_B 109 -------EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVP 178 (321)
T ss_dssp -------CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCE
T ss_pred -------eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCE
Confidence 5799999999999999997543 234699999999999999999999997 89999999999999999999
Q ss_pred EEcccCCcccc--------------------------------ccccccceeeeeeehhhhc
Q 005898 633 KLSDYGLSIVS--------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 633 ki~DfGla~~~--------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
||+|||+++.. .|+||+||++|+|+++...
T Consensus 179 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p 240 (321)
T 2qkw_B 179 KITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA 240 (321)
T ss_dssp EECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTT
T ss_pred EEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCc
Confidence 99999998531 1999999999999998643
No 42
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1e-28 Score=260.05 Aligned_cols=246 Identities=19% Similarity=0.259 Sum_probs=219.8
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
+.|++|+|++|.+.+..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 57899999999999888888999999999999999999888999999999999999999998 5676654 79999999
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCcccc--ccC-CCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCc
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISG--SLP-DLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEI 274 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g--~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~ 274 (671)
++|++++..+..+..+++|+.|++++|.++. ..+ .+..+++|++|++++|+++......+.+|+.+++++|.+++..
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 208 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccC
Confidence 9999998888889999999999999999963 444 3788999999999999998765556789999999999999988
Q ss_pred hhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCC--
Q 005898 275 PKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSN-- 352 (671)
Q Consensus 275 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~-- 352 (671)
|..+..+++|+.|++++|.+++.++..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+..
T Consensus 209 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~ 287 (330)
T 1xku_A 209 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 287 (330)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc
Confidence 999999999999999999999999988999999999999999999 88989999999999999999999766665543
Q ss_pred ----CCCCceeccCCCcCC
Q 005898 353 ----ESDKRVVKFRGNCLS 367 (671)
Q Consensus 353 ----~~~l~~l~l~~N~l~ 367 (671)
...+..+++++|.+.
T Consensus 288 ~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 288 YNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp CCTTSCCCSEEECCSSSSC
T ss_pred cccccccccceEeecCccc
Confidence 356778899998875
No 43
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.96 E-value=2.5e-29 Score=297.52 Aligned_cols=271 Identities=21% Similarity=0.217 Sum_probs=240.8
Q ss_pred cCCCccCCCcchhcccCCCCCCEEecccccccccC-CccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcC
Q 005898 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSL-PDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFF 178 (671)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~-p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 178 (671)
+++.|......+..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+
T Consensus 30 dLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l 109 (844)
T 3j0a_A 30 LLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGL 109 (844)
T ss_dssp EEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCC
T ss_pred ECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCC
Confidence 56667666666789999999999999999777777 78899999999999999999999999999999999999999999
Q ss_pred CCCCCcc--cCCCCCcCEEEcccccCCCCCc-ccccCCCCCCEEEeccCccccccCC-CCCC--CCCCEEECCCCCCCCC
Q 005898 179 NNTIPNW--FDSLPSLTFLSMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISGSLPD-LSSL--GSLNVLNLSDNKLDSN 252 (671)
Q Consensus 179 ~~~~p~~--~~~l~~L~~L~L~~N~l~g~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l--~~L~~L~Ls~N~l~~~ 252 (671)
++.+|.. |+++++|++|+|++|.+++..| ..|+++++|+.|+|++|.+++..|. +..+ ++|+.|++++|.+.+.
T Consensus 110 ~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~ 189 (844)
T 3j0a_A 110 SDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSR 189 (844)
T ss_dssp SSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCC
T ss_pred CcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccc
Confidence 9877765 9999999999999999998765 5799999999999999999987764 5555 8999999999999987
Q ss_pred CCCCC---------CCccEEEcCCCCCCCCchhhhcC--------------------------------------Ccccc
Q 005898 253 LPKLP---------RGLVMAFLSNNSFSGEIPKQYGQ--------------------------------------LNQLQ 285 (671)
Q Consensus 253 ~p~~~---------~~L~~l~l~~N~l~~~~p~~~~~--------------------------------------l~~L~ 285 (671)
.|... ..|+.+++++|.+++.+|..+.. .++|+
T Consensus 190 ~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~ 269 (844)
T 3j0a_A 190 VSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVR 269 (844)
T ss_dssp CCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCC
T ss_pred cccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCcc
Confidence 76432 13899999999988877765543 26899
Q ss_pred eeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCc
Q 005898 286 QLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNC 365 (671)
Q Consensus 286 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~ 365 (671)
.|++++|.+.+.++..+..+++|+.|+|++|++++..|..+..+++|+.|++++|.+++..|..+..+++++.+++++|.
T Consensus 270 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 349 (844)
T 3j0a_A 270 HLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNH 349 (844)
T ss_dssp EEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCC
T ss_pred EEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999889999999999999999998
Q ss_pred CCCCc
Q 005898 366 LSSNV 370 (671)
Q Consensus 366 l~~~~ 370 (671)
+.+..
T Consensus 350 i~~~~ 354 (844)
T 3j0a_A 350 IAIIQ 354 (844)
T ss_dssp CCCCC
T ss_pred CCccC
Confidence 87543
No 44
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=1.5e-28 Score=277.96 Aligned_cols=263 Identities=25% Similarity=0.277 Sum_probs=178.5
Q ss_pred cCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCC
Q 005898 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (671)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (671)
+++.|...+..+..+.++++|++|+|++|.+.+..|+.|+++++|++|||++|+++ .+|.. .+++|++|+|++|+++
T Consensus 58 ~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~ 134 (562)
T 3a79_B 58 SLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFD 134 (562)
T ss_dssp ECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCS
T ss_pred ECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCcc
Confidence 45556555555567888888888888888888877888888888888888888886 56655 7888888888888887
Q ss_pred C-CCCcccCCCCCcCEEEcccccCCC-------------------------CCcccccCCC-------------------
Q 005898 180 N-TIPNWFDSLPSLTFLSMRNNKLAG-------------------------PFPSSIQRIS------------------- 214 (671)
Q Consensus 180 ~-~~p~~~~~l~~L~~L~L~~N~l~g-------------------------~~p~~l~~l~------------------- 214 (671)
+ .+|..|+++++|++|++++|++++ ..|..+..++
T Consensus 135 ~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~ 214 (562)
T 3a79_B 135 VLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVN 214 (562)
T ss_dssp BCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCE
T ss_pred ccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhh
Confidence 6 356778888888888887777653 2233332222
Q ss_pred --------------------------------------------------------------CCCEEEeccCccccccCC
Q 005898 215 --------------------------------------------------------------TLSDLDLSKNAISGSLPD 232 (671)
Q Consensus 215 --------------------------------------------------------------~L~~L~Ls~N~l~g~~p~ 232 (671)
+|++|++++|.++|.+|.
T Consensus 215 ~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~ 294 (562)
T 3a79_B 215 MSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDR 294 (562)
T ss_dssp EEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCC
T ss_pred hcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccc
Confidence 455555555555555443
Q ss_pred -C-----------------------------------------------------CCCCCCCEEECCCCCCCCCCCCC--
Q 005898 233 -L-----------------------------------------------------SSLGSLNVLNLSDNKLDSNLPKL-- 256 (671)
Q Consensus 233 -~-----------------------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~-- 256 (671)
+ ..+++|++|++++|++++.+|..
T Consensus 295 ~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 374 (562)
T 3a79_B 295 EEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCS 374 (562)
T ss_dssp CCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCC
T ss_pred hhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhc
Confidence 1 45566777777777776655543
Q ss_pred -CCCccEEEcCCCCCCC--CchhhhcCCcccceeecccccccC-CCccccCCCCCcCeEecccCcCcccCCcccCCCCCc
Q 005898 257 -PRGLVMAFLSNNSFSG--EIPKQYGQLNQLQQLDMSFNALRG-MPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKL 332 (671)
Q Consensus 257 -~~~L~~l~l~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L 332 (671)
..+|+.+++++|++++ .+|..++.+++|+.|++++|++++ .++..+..+++|+.|++++|++++.+|..+. .+|
T Consensus 375 ~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L 452 (562)
T 3a79_B 375 TLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKV 452 (562)
T ss_dssp SCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTC
T ss_pred ccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcC
Confidence 2456677777777765 334556677777777777777776 4444466667777777777777766665543 567
Q ss_pred cEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 333 VFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 333 ~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
+.|++++|+++ .+|..+..+++++.+++++|.++.
T Consensus 453 ~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 453 KVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp SEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC
T ss_pred CEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC
Confidence 77777777777 566666677777777777777763
No 45
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.96 E-value=4.3e-30 Score=269.53 Aligned_cols=176 Identities=25% Similarity=0.352 Sum_probs=154.2
Q ss_pred ccCHHHHHHHhcC----------CCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCC
Q 005898 472 SFTLEELKEATNN----------FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPH 540 (671)
Q Consensus 472 ~~~~~~~~~~~~~----------f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n 540 (671)
.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4677888777764 666778999999999999976 79999999997665555678999999999999999
Q ss_pred cccccceeecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCC
Q 005898 541 LVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVK 620 (671)
Q Consensus 541 iv~l~g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk 620 (671)
|++++++|...+ ..++||||+++|+|.+++... .++|..+..++.|+++||+|||+. +|+|||||
T Consensus 104 iv~~~~~~~~~~--------~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlk 168 (321)
T 2c30_A 104 VVEMYKSYLVGE--------ELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIK 168 (321)
T ss_dssp BCCEEEEEEETT--------EEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred cceEEEEEEECC--------EEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCC
Confidence 999999998753 689999999999999998643 489999999999999999999997 89999999
Q ss_pred CCceeecCCCcEEEcccCCcccc------------------------------ccccccceeeeeeehhhhc
Q 005898 621 TNNILLNEHRIAKLSDYGLSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 621 ~~NiLl~~~~~~ki~DfGla~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|+||+++.++.+||+|||+++.. .|+||+|+++|+|+++...
T Consensus 169 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p 240 (321)
T 2c30_A 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240 (321)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred HHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 99999999999999999987532 1999999999999997543
No 46
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=5.5e-29 Score=287.88 Aligned_cols=267 Identities=21% Similarity=0.196 Sum_probs=158.9
Q ss_pred CCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCC
Q 005898 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNN 180 (671)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 180 (671)
++.|...+..+..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|++++..+..|.++++|++|+|++|.+++
T Consensus 32 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~ 111 (680)
T 1ziw_A 32 LTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQK 111 (680)
T ss_dssp CCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC
T ss_pred CCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCc
Confidence 44443333334456667777777777777766666667777777777777776664444456677777777777777666
Q ss_pred CCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCC---CCCCCCCCEEECCCCCCCCCCCCCC
Q 005898 181 TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD---LSSLGSLNVLNLSDNKLDSNLPKLP 257 (671)
Q Consensus 181 ~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~---~~~l~~L~~L~Ls~N~l~~~~p~~~ 257 (671)
..|..|+++++|++|++++|.+++..|..++++++|++|++++|.+++..+. ...+++|+.|++++|++++..|...
T Consensus 112 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 191 (680)
T 1ziw_A 112 IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCF 191 (680)
T ss_dssp CCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGG
T ss_pred cChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhh
Confidence 5556666777777777777777666666666677777777777766655543 2344566666666666655444310
Q ss_pred ------------------------------CCccEEEcCCCCCCCCchhhhcCCcc--cceeecccccccCCCccccCCC
Q 005898 258 ------------------------------RGLVMAFLSNNSFSGEIPKQYGQLNQ--LQQLDMSFNALRGMPPPAIFSL 305 (671)
Q Consensus 258 ------------------------------~~L~~l~l~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~~~~~~~l 305 (671)
..++.+++++|.+++..|..|..++. |+.|++++|++++.+|..+..+
T Consensus 192 ~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l 271 (680)
T 1ziw_A 192 HAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWL 271 (680)
T ss_dssp GGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTC
T ss_pred hhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCc
Confidence 23455555555555555555555433 5555555555555555555555
Q ss_pred CCcCeEecccCcCcccCCcccC---------------------------------CCCCccEEECcCCcCcccCCCCCCC
Q 005898 306 PNISDLNLASNKFSGSLPKNLN---------------------------------CGGKLVFFDISNNKLTGGLPSCLSN 352 (671)
Q Consensus 306 ~~L~~L~L~~N~l~g~~p~~~~---------------------------------~~~~L~~l~ls~N~l~g~~p~~~~~ 352 (671)
++|+.|++++|++++..|..+. .+++|+.|++++|.+++..|..+..
T Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 351 (680)
T 1ziw_A 272 PQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTG 351 (680)
T ss_dssp TTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTT
T ss_pred ccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhcc
Confidence 5555555555555555554444 4455555555555555555555555
Q ss_pred CCCCceeccCCCcCC
Q 005898 353 ESDKRVVKFRGNCLS 367 (671)
Q Consensus 353 ~~~l~~l~l~~N~l~ 367 (671)
+++++.+++++|.++
T Consensus 352 l~~L~~L~Ls~n~~~ 366 (680)
T 1ziw_A 352 LINLKYLSLSNSFTS 366 (680)
T ss_dssp CTTCCEEECTTCBSC
T ss_pred ccCCcEEECCCCchh
Confidence 555555555555443
No 47
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.96 E-value=4e-30 Score=270.47 Aligned_cols=167 Identities=23% Similarity=0.370 Sum_probs=147.7
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.++|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++|+.++||||+++++++.+.+
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------ 87 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK------ 87 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC------
Confidence 45788999999999999999996 58999999999653 2344677899999999999999999999997653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|.+++.... .+++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 88 --~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 159 (328)
T 3fe3_A 88 --TLYLIMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFG 159 (328)
T ss_dssp --EEEEEECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred --EEEEEEECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeecc
Confidence 7899999999999999997643 389999999999999999999997 89999999999999999999999999
Q ss_pred Ccccc------------------------------ccccccceeeeeeehhhhc
Q 005898 639 LSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+++.. .|+||+||++|+|++|...
T Consensus 160 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p 213 (328)
T 3fe3_A 160 FSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213 (328)
T ss_dssp CCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred CceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCC
Confidence 98532 1999999999999997554
No 48
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=1.3e-28 Score=259.38 Aligned_cols=245 Identities=21% Similarity=0.233 Sum_probs=217.7
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
++|++|+|++|.+.+..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 58999999999999888889999999999999999999888999999999999999999998 6776655 89999999
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCcccc--ccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCc
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISG--SLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEI 274 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g--~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~ 274 (671)
++|++++..+..+..+++|+.|++++|.++. ..|. +..+ +|+.|++++|++++.....+.+|+.+++++|.+++..
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIE 209 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccC
Confidence 9999997666779999999999999999963 4443 6666 9999999999998865566788999999999999988
Q ss_pred hhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCC-
Q 005898 275 PKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNE- 353 (671)
Q Consensus 275 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~- 353 (671)
|..+..+++|+.|++++|++++.++..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+...
T Consensus 210 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 288 (332)
T 2ft3_A 210 LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVG 288 (332)
T ss_dssp TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccc
Confidence 899999999999999999999999989999999999999999999 789889999999999999999997766665443
Q ss_pred -----CCCceeccCCCcCC
Q 005898 354 -----SDKRVVKFRGNCLS 367 (671)
Q Consensus 354 -----~~l~~l~l~~N~l~ 367 (671)
..++.+++++|.+.
T Consensus 289 ~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 289 FGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp CCSSSCCBSEEECCSSSSC
T ss_pred cccccccccceEeecCccc
Confidence 45778899998776
No 49
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=6.3e-29 Score=275.16 Aligned_cols=251 Identities=24% Similarity=0.229 Sum_probs=212.7
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 47899999999999999999999999999999999999988999999999999999999999776678999999999999
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccccC-CCCCCCCCCEEECCCCCCCCCCCC---CCCCccEEEcCCCCCCCC
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPK---LPRGLVMAFLSNNSFSGE 273 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~L~~l~l~~N~l~~~ 273 (671)
++|++++..|..+..+++|+.|++++|.+++..| .+..+++|+.|++++|++++..+. -..+|+.+++++|.+++.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 9999999889999999999999999999998777 489999999999999999875442 234566666666666655
Q ss_pred chhhhcCCc------------------------ccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCC
Q 005898 274 IPKQYGQLN------------------------QLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCG 329 (671)
Q Consensus 274 ~p~~~~~l~------------------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~ 329 (671)
.+..|..++ +|+.|++++|++++.++..+..+++|+.|+|++|++++..+..+..+
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 271 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTC
T ss_pred ChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcccc
Confidence 554555444 55566666677777766677888888888888888887777778888
Q ss_pred CCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 330 GKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 330 ~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
.+|+.|+|++|++++..|..+..+++|+.+++++|.+++
T Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 310 (477)
T 2id5_A 272 LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT 310 (477)
T ss_dssp TTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSC
T ss_pred ccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCce
Confidence 888888888888888888888888888888888888774
No 50
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.96 E-value=9.7e-29 Score=281.87 Aligned_cols=295 Identities=19% Similarity=0.177 Sum_probs=236.2
Q ss_pred CEeEEEecCCCCCCC--CCCCCc-ccccccCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcc
Q 005898 74 FITELKIIGDKPSNV--GNFDGF-ASANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLS 150 (671)
Q Consensus 74 ~v~~l~l~~~~~~~~--~~~~~~-~~~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls 150 (671)
.++.+++.++...+. ..+.+. .....+++.|...+..|..++++++|++|+|++|.+.+..|..++++++|++|+|+
T Consensus 57 ~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 136 (606)
T 3vq2_A 57 ELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVA 136 (606)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECC
T ss_pred cCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCC
Confidence 467777776654332 112221 11234566676666668899999999999999999998888899999999999999
Q ss_pred cCcCCC-CCCccCCCCCccCEEEccCCcCCCCCCcccC------------------------------------------
Q 005898 151 SNFLFG-SVPPKISTMVKLQTLILDDNFFNNTIPNWFD------------------------------------------ 187 (671)
Q Consensus 151 ~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~------------------------------------------ 187 (671)
+|.+++ .+|..|+++++|++|+|++|.+++..|..++
T Consensus 137 ~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~ 216 (606)
T 3vq2_A 137 HNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFN 216 (606)
T ss_dssp SSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCS
T ss_pred CCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCcc
Confidence 999986 6799999999999999999988765443221
Q ss_pred --------------------------------------------------------------------------------
Q 005898 188 -------------------------------------------------------------------------------- 187 (671)
Q Consensus 188 -------------------------------------------------------------------------------- 187 (671)
T Consensus 217 ~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~ 296 (606)
T 3vq2_A 217 SSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVS 296 (606)
T ss_dssp CHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCC
T ss_pred chhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCcc
Confidence
Q ss_pred ---------------------------------------------------CCCCcCEEEcccccCCCC--CcccccCCC
Q 005898 188 ---------------------------------------------------SLPSLTFLSMRNNKLAGP--FPSSIQRIS 214 (671)
Q Consensus 188 ---------------------------------------------------~l~~L~~L~L~~N~l~g~--~p~~l~~l~ 214 (671)
.+++|++|++++|++++. +|..+..++
T Consensus 297 ~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~ 376 (606)
T 3vq2_A 297 IKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTN 376 (606)
T ss_dssp CCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCS
T ss_pred chhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCC
Confidence 122333344444444332 245555666
Q ss_pred CCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCC-CC---CCCccEEEcCCCCCCCCchhhhcCCcccceeecc
Q 005898 215 TLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLP-KL---PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMS 290 (671)
Q Consensus 215 ~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p-~~---~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls 290 (671)
+|+.|++++|.+++..+.+..+++|+.|++++|++++..| .. ..+|+.+++++|.+++..|..++.+++|+.|+++
T Consensus 377 ~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 456 (606)
T 3vq2_A 377 SLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMA 456 (606)
T ss_dssp CCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECT
T ss_pred cccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECC
Confidence 6666666666666655567889999999999999988776 22 4689999999999999999999999999999999
Q ss_pred cccccC-CCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 291 FNALRG-MPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 291 ~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
+|.+++ .+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++.+|..+..+++++.+++++|.++.
T Consensus 457 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 535 (606)
T 3vq2_A 457 GNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535 (606)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC
T ss_pred CCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc
Confidence 999998 478889999999999999999999999999999999999999999999999999999999999999999884
No 51
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.96 E-value=9.1e-30 Score=265.48 Aligned_cols=170 Identities=19% Similarity=0.385 Sum_probs=151.1
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccce
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 561 (671)
++|...+.||+|+||+||+|+.. +++.||||++........+.+.+|++++++++||||+++++++.+.+ .
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--------~ 81 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--------R 81 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--------E
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--------e
Confidence 46778899999999999999975 68999999987766667788999999999999999999999998753 6
Q ss_pred EEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCcc
Q 005898 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~ 641 (671)
.++||||+++|+|.+++.... ..++|.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 156 (310)
T 3s95_A 82 LNFITEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLAR 156 (310)
T ss_dssp EEEEEECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCE
T ss_pred eEEEEEecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccce
Confidence 899999999999999998642 3499999999999999999999997 79999999999999999999999999985
Q ss_pred cc--------------------------------------------ccccccceeeeeeehhhhcccc
Q 005898 642 VS--------------------------------------------EDINSVGVRLLILMSFFFGSMT 665 (671)
Q Consensus 642 ~~--------------------------------------------~d~~s~g~~l~~~~~~~~~~~~ 665 (671)
.. .|+||+|+++|+|+++....+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~ 224 (310)
T 3s95_A 157 LMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224 (310)
T ss_dssp ECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred ecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence 31 2999999999999987655443
No 52
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.96 E-value=7.9e-30 Score=264.48 Aligned_cols=166 Identities=22% Similarity=0.380 Sum_probs=147.7
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.+.|+..+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.++++++||||+++++++.+.+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-------- 90 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-------- 90 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--------
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--------
Confidence 45788999999999999999985 579999999987555445677899999999999999999999998754
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla 640 (671)
..++||||+++|+|.+++... .+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 91 ELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 689999999999999999764 389999999999999999999997 8999999999999999999999999987
Q ss_pred cccc------------------------------cccccceeeeeeehhhhc
Q 005898 641 IVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 641 ~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+... |+||+||++|+|+++...
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 215 (297)
T 3fxz_A 164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215 (297)
T ss_dssp EECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred eecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 5321 999999999999997543
No 53
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.96 E-value=2.7e-30 Score=281.73 Aligned_cols=175 Identities=18% Similarity=0.270 Sum_probs=150.7
Q ss_pred HHHHHHHhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch---hhHHHHHHHHHHHhcCCCCCcccccceeec
Q 005898 475 LEELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCID 550 (671)
Q Consensus 475 ~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 550 (671)
+.++....++|+..++||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.++..++|||||+++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4555566788999999999999999999976 588999999964321 123348899999999999999999999987
Q ss_pred CCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC
Q 005898 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (671)
Q Consensus 551 ~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~ 630 (671)
.+ ..|+|||||++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++
T Consensus 146 ~~--------~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 146 DN--------NLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNG 212 (437)
T ss_dssp SS--------EEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred CC--------EEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCC
Confidence 53 7899999999999999998632 3489999999999999999999987 899999999999999999
Q ss_pred cEEEcccCCcccc------------------------------------ccccccceeeeeeehhhhc
Q 005898 631 IAKLSDYGLSIVS------------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 631 ~~ki~DfGla~~~------------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
.+||+|||+|+.. .|+||+||++|||++|...
T Consensus 213 ~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~P 280 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280 (437)
T ss_dssp CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCT
T ss_pred CEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCC
Confidence 9999999998431 1999999999999997654
No 54
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.96 E-value=1.9e-29 Score=262.57 Aligned_cols=180 Identities=38% Similarity=0.592 Sum_probs=157.6
Q ss_pred cccCHHHHHHHhcCCCcC------ceeccCCceEEEEEEEcCCcEEEEEEccCCc----hhhHHHHHHHHHHHhcCCCCC
Q 005898 471 RSFTLEELKEATNNFDMS------AIMGEGSYGKLYKGRLENGTSVAIRCLPSSK----KYTVRNLKLRLDLLAKLRHPH 540 (671)
Q Consensus 471 ~~~~~~~~~~~~~~f~~~------~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~n 540 (671)
..++++++..++++|... +.||+|+||.||+|+. +++.||||++.... ....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999887 8999999999999986 57899999986432 234578999999999999999
Q ss_pred cccccceeecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCC
Q 005898 541 LVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVK 620 (671)
Q Consensus 541 iv~l~g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk 620 (671)
|+++++++.+.+ ..++||||+++|+|.+++........++|..+..++.++++||+|||+. +|+|||||
T Consensus 92 i~~~~~~~~~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlk 160 (307)
T 2nru_A 92 LVELLGFSSDGD--------DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIK 160 (307)
T ss_dssp BCCEEEEECSSS--------SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred eEEEEEEEecCC--------ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCC
Confidence 999999997653 5799999999999999987544345699999999999999999999987 89999999
Q ss_pred CCceeecCCCcEEEcccCCcccc-------------------------------ccccccceeeeeeehhhhc
Q 005898 621 TNNILLNEHRIAKLSDYGLSIVS-------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 621 ~~NiLl~~~~~~ki~DfGla~~~-------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|+||++++++.+||+|||+++.. .|+||+|+++|+|+++...
T Consensus 161 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p 233 (307)
T 2nru_A 161 SANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPA 233 (307)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCS
T ss_pred HHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCC
Confidence 99999999999999999987532 1999999999999997543
No 55
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.96 E-value=8.2e-30 Score=270.78 Aligned_cols=168 Identities=24% Similarity=0.407 Sum_probs=146.3
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRD 555 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 555 (671)
..++|+..++||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++..+ +|||||++++++.+.+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--- 97 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--- 97 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS---
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC---
Confidence 3468999999999999999999965 68999999997532 23456788999999988 6999999999998753
Q ss_pred CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEc
Q 005898 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (671)
Q Consensus 556 ~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~ 635 (671)
..|+||||+++|+|..++.... .+++.++..++.+++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 98 -----~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~ 166 (353)
T 3txo_A 98 -----RLFFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLA 166 (353)
T ss_dssp -----EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred -----EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEc
Confidence 7899999999999999997643 389999999999999999999997 89999999999999999999999
Q ss_pred ccCCccccc------------------------------cccccceeeeeeehhhhc
Q 005898 636 DYGLSIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 636 DfGla~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
|||+++... |+||+||++|||++|...
T Consensus 167 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~P 223 (353)
T 3txo_A 167 DFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223 (353)
T ss_dssp CCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCS
T ss_pred cccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCC
Confidence 999987421 999999999999997554
No 56
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=2.3e-28 Score=257.51 Aligned_cols=259 Identities=22% Similarity=0.229 Sum_probs=221.6
Q ss_pred cCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCC
Q 005898 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (671)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (671)
+++.|......+..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|+++ .+|..+. ++|++|++++|.++
T Consensus 60 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~ 136 (332)
T 2ft3_A 60 DLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIR 136 (332)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCC
T ss_pred ECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccC
Confidence 45555544444668999999999999999999999999999999999999999997 6777665 89999999999999
Q ss_pred CCCCcccCCCCCcCEEEcccccCC--CCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCC-
Q 005898 180 NTIPNWFDSLPSLTFLSMRNNKLA--GPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL- 256 (671)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~--g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~- 256 (671)
+..+..|.++++|++|++++|.++ +..|..+..+ +|+.|++++|.+++.+..+. ++|+.|++++|++++..+..
T Consensus 137 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l 213 (332)
T 2ft3_A 137 KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDL 213 (332)
T ss_dssp CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSS
T ss_pred ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc--CCCCEEECCCCcCCccCHHHh
Confidence 877778999999999999999996 4778888888 99999999999997554443 79999999999999877653
Q ss_pred --CCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCC-----
Q 005898 257 --PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCG----- 329 (671)
Q Consensus 257 --~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~----- 329 (671)
..+|+.+++++|.+++..|..+..+++|+.|++++|+++.. |..+..+++|+.|++++|++++..+..+...
T Consensus 214 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 292 (332)
T 2ft3_A 214 LRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRV-PAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVK 292 (332)
T ss_dssp TTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBC-CTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSS
T ss_pred cCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeec-ChhhhcCccCCEEECCCCCCCccChhHccccccccc
Confidence 35799999999999998888999999999999999999954 5568999999999999999998777766543
Q ss_pred -CCccEEECcCCcCc--ccCCCCCCCCCCCceeccCCCc
Q 005898 330 -GKLVFFDISNNKLT--GGLPSCLSNESDKRVVKFRGNC 365 (671)
Q Consensus 330 -~~L~~l~ls~N~l~--g~~p~~~~~~~~l~~l~l~~N~ 365 (671)
..|+.+++++|.++ +..|..+..++.++.+++++|.
T Consensus 293 ~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 293 RAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 57899999999987 6677778888999999998874
No 57
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=8.8e-30 Score=269.72 Aligned_cols=167 Identities=26% Similarity=0.442 Sum_probs=145.9
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++|++++||||+++++++.+.+
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~------- 81 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN------- 81 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSS-------
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-------
Confidence 46788999999999999999996 479999999996543 223457899999999999999999999998653
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 82 -~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~ 154 (347)
T 3zgw_A 82 -KIFMVLEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGL 154 (347)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred -EEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccC
Confidence 7899999999999999997643 389999999999999999999997 899999999999999999999999999
Q ss_pred cccc--------------------------------ccccccceeeeeeehhhhc
Q 005898 640 SIVS--------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~--------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+... .|+||+||++|+|++|...
T Consensus 155 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~P 209 (347)
T 3zgw_A 155 CAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209 (347)
T ss_dssp CBC--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence 7431 1999999999999998654
No 58
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.96 E-value=9.7e-30 Score=268.46 Aligned_cols=166 Identities=23% Similarity=0.362 Sum_probs=146.3
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~------ 78 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD------ 78 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS------
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC------
Confidence 56888999999999999999965 79999999996432 234567899999999999999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|..++.... .+++.....++.+|+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 79 --~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG 150 (337)
T 1o6l_A 79 --RLCFVMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp --EEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred --EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeecc
Confidence 7899999999999999997643 389999999999999999999997 89999999999999999999999999
Q ss_pred Ccccc------------------------------ccccccceeeeeeehhhhc
Q 005898 639 LSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+++.. .|+||+||++|||++|...
T Consensus 151 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P 204 (337)
T 1o6l_A 151 LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204 (337)
T ss_dssp TCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred chhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCC
Confidence 98641 1999999999999997643
No 59
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.96 E-value=1.2e-29 Score=271.49 Aligned_cols=166 Identities=20% Similarity=0.505 Sum_probs=144.6
Q ss_pred hcCCCcCceeccCCceEEEEEEEc--------CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCCCcccccceeecC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE--------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDG 551 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 551 (671)
.++|+..+.||+|+||.||+|+.. ++..||||+++... ....+++.+|+++|+++ +|||||+++++|.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 457888999999999999999852 35579999997543 34567899999999999 899999999999765
Q ss_pred CCCCCcccceEEEEEecCCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccC
Q 005898 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (671)
Q Consensus 552 ~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrD 618 (671)
+ ..++||||+++|+|.+++....+ ...++|.++..++.||++||+|||+. +|+|||
T Consensus 160 ~--------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrD 228 (370)
T 2psq_A 160 G--------PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRD 228 (370)
T ss_dssp S--------SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred C--------CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 3 57999999999999999976431 24589999999999999999999997 899999
Q ss_pred CCCCceeecCCCcEEEcccCCccccc--------------------------------cccccceeeeeeeh
Q 005898 619 VKTNNILLNEHRIAKLSDYGLSIVSE--------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 619 lk~~NiLl~~~~~~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~ 658 (671)
|||+||++++++.+||+|||+++... |+||+||++|||++
T Consensus 229 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt 300 (370)
T 2psq_A 229 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300 (370)
T ss_dssp CCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHT
T ss_pred cchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHc
Confidence 99999999999999999999986321 99999999999998
No 60
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=4.7e-28 Score=254.92 Aligned_cols=260 Identities=22% Similarity=0.192 Sum_probs=221.0
Q ss_pred cCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCC
Q 005898 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (671)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (671)
+++.|...+..+..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|+++ .+|..+. ++|++|++++|.++
T Consensus 58 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~ 134 (330)
T 1xku_A 58 DLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEIT 134 (330)
T ss_dssp ECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCC
T ss_pred ECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCccc
Confidence 45555544444558999999999999999999988999999999999999999997 5776665 79999999999999
Q ss_pred CCCCcccCCCCCcCEEEcccccCC--CCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCC-
Q 005898 180 NTIPNWFDSLPSLTFLSMRNNKLA--GPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL- 256 (671)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~--g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~- 256 (671)
+..+..|.++++|++|++++|.++ +..|..+..+++|+.|++++|.++.....+. ++|++|++++|++++..|..
T Consensus 135 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~ 212 (330)
T 1xku_A 135 KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASL 212 (330)
T ss_dssp BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGG
T ss_pred ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc--ccCCEEECCCCcCCccCHHHh
Confidence 888888999999999999999996 4778899999999999999999986544443 89999999999998876643
Q ss_pred --CCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCC------
Q 005898 257 --PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNC------ 328 (671)
Q Consensus 257 --~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~------ 328 (671)
..+|+.+++++|.+++..+..+..+++|+.|++++|+++.. |..+..+++|+.|++++|++++..+..+..
T Consensus 213 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~ 291 (330)
T 1xku_A 213 KGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKV-PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTK 291 (330)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSC-CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTT
T ss_pred cCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccC-ChhhccCCCcCEEECCCCcCCccChhhcCCcccccc
Confidence 36799999999999988888999999999999999999954 557899999999999999999877666643
Q ss_pred CCCccEEECcCCcCcc--cCCCCCCCCCCCceeccCCCc
Q 005898 329 GGKLVFFDISNNKLTG--GLPSCLSNESDKRVVKFRGNC 365 (671)
Q Consensus 329 ~~~L~~l~ls~N~l~g--~~p~~~~~~~~l~~l~l~~N~ 365 (671)
...++.+++++|.+.. ..|..+..+..++.+++++|+
T Consensus 292 ~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 292 KASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3678999999999863 456677778889999998874
No 61
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.96 E-value=3.4e-30 Score=278.74 Aligned_cols=172 Identities=22% Similarity=0.298 Sum_probs=148.6
Q ss_pred HHHHHHhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch---hhHHHHHHHHHHHhcCCCCCcccccceeecC
Q 005898 476 EELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDG 551 (671)
Q Consensus 476 ~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 551 (671)
+++....++|+..++||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.+++.++|||||+++++|.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 444556678999999999999999999975 689999999864221 1234588999999999999999999999875
Q ss_pred CCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc
Q 005898 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI 631 (671)
Q Consensus 552 ~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 631 (671)
+ ..|+||||+++|+|.++++.. .+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.
T Consensus 142 ~--------~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 142 R--------YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp S--------EEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred C--------EEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCC
Confidence 3 789999999999999999753 388999999999999999999997 8999999999999999999
Q ss_pred EEEcccCCcccc-----------------------------------ccccccceeeeeeehhhhc
Q 005898 632 AKLSDYGLSIVS-----------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 632 ~ki~DfGla~~~-----------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+||+|||+++.. .|+||+||++|||++|...
T Consensus 207 ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~P 272 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272 (410)
T ss_dssp EEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCT
T ss_pred EEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCC
Confidence 999999998431 2999999999999997654
No 62
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.96 E-value=3.3e-28 Score=275.16 Aligned_cols=136 Identities=23% Similarity=0.214 Sum_probs=92.1
Q ss_pred CCCCCCCEEECCCCCCCCCCCCC--CCCccEEEcCCCCCCCCch-hhhcCCcccceeecccccccCCCccccCCCCCcCe
Q 005898 234 SSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGEIP-KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISD 310 (671)
Q Consensus 234 ~~l~~L~~L~Ls~N~l~~~~p~~--~~~L~~l~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 310 (671)
..+++|++|++++|.+++..+.+ ..+|+.+++++|.+++..| ..+..+++|++|++++|.+++.+|..+..+++|+.
T Consensus 370 ~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 449 (570)
T 2z63_A 370 FGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449 (570)
T ss_dssp HTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred cccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcE
Confidence 34567777777777766543322 3466777777777766554 45666777777777777777777666777777777
Q ss_pred EecccCcCc-ccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCCC
Q 005898 311 LNLASNKFS-GSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSN 369 (671)
Q Consensus 311 L~L~~N~l~-g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 369 (671)
|++++|.++ +.+|..+..+++|+.|++++|++++..|..+..+++++.+++++|.+++.
T Consensus 450 L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 509 (570)
T 2z63_A 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509 (570)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred EECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCC
Confidence 777777776 56676677777777777777777766676777777777777777766653
No 63
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.96 E-value=9.6e-30 Score=265.40 Aligned_cols=171 Identities=25% Similarity=0.465 Sum_probs=144.8
Q ss_pred HhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
..++|+..+.||+|+||+||+|+. +|+.||||++.... ....+++.+|++++++++||||+++++++.+.+
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------ 107 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP------ 107 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT------
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC------
Confidence 456788899999999999999987 58899999986543 334578999999999999999999999997653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|.+++........+++..+..++.|+++||+|||+.. ++|+||||||+||++++++.+||+|||
T Consensus 108 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg 184 (309)
T 3p86_A 108 --NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFG 184 (309)
T ss_dssp --CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC
T ss_pred --ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCC
Confidence 57999999999999999986443334899999999999999999999872 239999999999999999999999999
Q ss_pred Ccccc------------------------------ccccccceeeeeeehhhh
Q 005898 639 LSIVS------------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 639 la~~~------------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
+++.. .|+||+||++|+|+++..
T Consensus 185 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~ 237 (309)
T 3p86_A 185 LSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQ 237 (309)
T ss_dssp -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCC
T ss_pred CCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 98531 199999999999999754
No 64
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.96 E-value=1.5e-29 Score=271.11 Aligned_cols=163 Identities=28% Similarity=0.529 Sum_probs=139.5
Q ss_pred cCCCcCceeccCCceEEEEEEEc----CCcEEEEEEccCC-chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
++|+..+.||+|+||.||+|+.. ++..||||+++.. .....++|.+|++++++++|||||+++++|.+.+
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 119 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK----- 119 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-----
Confidence 46888999999999999999864 5778999999754 3445678999999999999999999999997653
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++|+|.++++... ..++|.++..++.||++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 120 ---~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 191 (373)
T 2qol_A 120 ---PVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191 (373)
T ss_dssp ---SCEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred ---ceEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcC
Confidence 5799999999999999997542 3599999999999999999999987 7999999999999999999999999
Q ss_pred CCccccc---------------------------------cccccceeeeeeeh
Q 005898 638 GLSIVSE---------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 638 Gla~~~~---------------------------------d~~s~g~~l~~~~~ 658 (671)
|+++... |+||+|+++|||++
T Consensus 192 g~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt 245 (373)
T 2qol_A 192 GLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245 (373)
T ss_dssp ----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred ccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHh
Confidence 9985421 99999999999988
No 65
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=1.7e-28 Score=276.49 Aligned_cols=293 Identities=24% Similarity=0.180 Sum_probs=201.8
Q ss_pred CEeEEEecCCCCCCC--CCCCCcc-cccccCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcc
Q 005898 74 FITELKIIGDKPSNV--GNFDGFA-SANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLS 150 (671)
Q Consensus 74 ~v~~l~l~~~~~~~~--~~~~~~~-~~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls 150 (671)
.++.+++.++...+. ..+.... ....+++.|...+..|..++++++|++|+|++|.+.+..|..|+++++|++|+|+
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECT
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECC
Confidence 466777766554322 1122111 1123455555545555678888888888888888877777778888888888888
Q ss_pred cCcCCC-CCCccCCCCCccCEEEccCCcCCCCCC-cccCCCCCcCEEEcccccCCCCCcccccC----------------
Q 005898 151 SNFLFG-SVPPKISTMVKLQTLILDDNFFNNTIP-NWFDSLPSLTFLSMRNNKLAGPFPSSIQR---------------- 212 (671)
Q Consensus 151 ~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~l~~---------------- 212 (671)
+|.+++ ..|..++++++|++|++++|.+.+.+| ..|.++++|++|++++|++++.+|..+..
T Consensus 107 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~ 186 (549)
T 2z81_A 107 GNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF 186 (549)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT
T ss_pred CCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccc
Confidence 888875 356677888888888888887544554 56777777777777777777666655433
Q ss_pred --------CCCCCEEEeccCcccccc------------------------------------------------------
Q 005898 213 --------ISTLSDLDLSKNAISGSL------------------------------------------------------ 230 (671)
Q Consensus 213 --------l~~L~~L~Ls~N~l~g~~------------------------------------------------------ 230 (671)
+++|++|++++|.+++..
T Consensus 187 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~ 266 (549)
T 2z81_A 187 LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGL 266 (549)
T ss_dssp HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECC
T ss_pred cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccc
Confidence 456666666666665520
Q ss_pred -----------------------------------------------------------CC-C-CCCCCCCEEECCCCCC
Q 005898 231 -----------------------------------------------------------PD-L-SSLGSLNVLNLSDNKL 249 (671)
Q Consensus 231 -----------------------------------------------------------p~-~-~~l~~L~~L~Ls~N~l 249 (671)
|. + ..+++|++|++++|++
T Consensus 267 ~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l 346 (549)
T 2z81_A 267 GDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLM 346 (549)
T ss_dssp SCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCC
T ss_pred ccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCcc
Confidence 00 0 2367888999999988
Q ss_pred CCCCC------CCCCCccEEEcCCCCCCCCch--hhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCccc
Q 005898 250 DSNLP------KLPRGLVMAFLSNNSFSGEIP--KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGS 321 (671)
Q Consensus 250 ~~~~p------~~~~~L~~l~l~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ 321 (671)
++.+| ....+|+.+++++|++++..+ ..++.+++|++|++++|++++. |..+..+++|+.|++++|++++
T Consensus 347 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-p~~~~~~~~L~~L~Ls~N~l~~- 424 (549)
T 2z81_A 347 VEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPM-PDSCQWPEKMRFLNLSSTGIRV- 424 (549)
T ss_dssp CHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCC-CSCCCCCTTCCEEECTTSCCSC-
T ss_pred ccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccC-ChhhcccccccEEECCCCCccc-
Confidence 87543 123578888899888876433 4578888888888888888854 4466777777777777777653
Q ss_pred CCcc------------------cCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCCCc
Q 005898 322 LPKN------------------LNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSNV 370 (671)
Q Consensus 322 ~p~~------------------~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 370 (671)
+|.. ...+++|+.|++++|+++ .+|. ...+++++.+++++|.+++..
T Consensus 425 l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~ 489 (549)
T 2z81_A 425 VKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVP 489 (549)
T ss_dssp CCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCC
T ss_pred ccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcC
Confidence 2221 125778999999999998 6776 456888999999999988643
No 66
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.96 E-value=1.7e-29 Score=264.61 Aligned_cols=166 Identities=20% Similarity=0.372 Sum_probs=146.5
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~------ 79 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ------ 79 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS------
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC------
Confidence 56888999999999999999975 79999999996432 223567889999999999999999999998653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|.+++.... .+++..+..++.+|+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 80 --~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg 151 (318)
T 1fot_A 80 --QIFMIMDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFG 151 (318)
T ss_dssp --EEEEEECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCS
T ss_pred --EEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecC
Confidence 7899999999999999998643 489999999999999999999987 89999999999999999999999999
Q ss_pred Cccccc---------------------------cccccceeeeeeehhhhc
Q 005898 639 LSIVSE---------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~~---------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+++... |+||+||++|+|++|...
T Consensus 152 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 202 (318)
T 1fot_A 152 FAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202 (318)
T ss_dssp SCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred cceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCC
Confidence 986421 999999999999997543
No 67
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.96 E-value=2.1e-29 Score=264.64 Aligned_cols=177 Identities=21% Similarity=0.396 Sum_probs=147.9
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCC----
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD---- 555 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~---- 555 (671)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||+++++|.+.....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356888999999999999999976 79999999997433 334678999999999999999999999987643210
Q ss_pred ---------------------------------------------CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHH
Q 005898 556 ---------------------------------------------DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWS 590 (671)
Q Consensus 556 ---------------------------------------------~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~ 590 (671)
.......++||||+++|+|.+++.........++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 00012379999999999999999876555567888
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCcccc---------------------------
Q 005898 591 ERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS--------------------------- 643 (671)
Q Consensus 591 ~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~--------------------------- 643 (671)
.+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 8999999999999999987 8999999999999999999999999997531
Q ss_pred ---------------ccccccceeeeeeehhhh
Q 005898 644 ---------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 644 ---------------~d~~s~g~~l~~~~~~~~ 661 (671)
.|+||+||++|+|+++..
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~ 274 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS 274 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCC
Confidence 199999999999998654
No 68
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.96 E-value=1e-29 Score=263.00 Aligned_cols=167 Identities=24% Similarity=0.485 Sum_probs=146.2
Q ss_pred cCCCcCceeccCCceEEEEEEE-----cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-----ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
++|+..+.||+|+||.||+|++ .+++.||||++........+++.+|++++++++||||++++++|...+.
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 85 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---- 85 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH----
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC----
Confidence 5678889999999999999984 2688999999987766667889999999999999999999999865321
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
...++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 86 --~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 158 (295)
T 3ugc_A 86 --RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 158 (295)
T ss_dssp --TSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCC
T ss_pred --CceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccC
Confidence 24799999999999999997643 2489999999999999999999987 8999999999999999999999999
Q ss_pred CCccccc---------------------------------cccccceeeeeeehhh
Q 005898 638 GLSIVSE---------------------------------DINSVGVRLLILMSFF 660 (671)
Q Consensus 638 Gla~~~~---------------------------------d~~s~g~~l~~~~~~~ 660 (671)
|+++... |+||+|+++|+|+++.
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 214 (295)
T 3ugc_A 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214 (295)
T ss_dssp CSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcc
Confidence 9986421 9999999999999963
No 69
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.96 E-value=5.5e-29 Score=278.61 Aligned_cols=262 Identities=23% Similarity=0.259 Sum_probs=181.1
Q ss_pred ccCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcC
Q 005898 99 ASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFF 178 (671)
Q Consensus 99 ~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 178 (671)
.+++.|...+..|..+.++++|++|+|++|.+.+..|+.|+++++|++|||++|+++ .+|.. .+++|++|+|++|.+
T Consensus 26 L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l 102 (520)
T 2z7x_B 26 LNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAF 102 (520)
T ss_dssp EECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCC
T ss_pred EECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCcc
Confidence 356666666666678999999999999999999988999999999999999999997 57766 899999999999999
Q ss_pred CC-CCCcccCCCCCcCEEEcccccCCCCCcccccCCCCC--CEEEeccCcc--ccccCC-CCCCC---------------
Q 005898 179 NN-TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTL--SDLDLSKNAI--SGSLPD-LSSLG--------------- 237 (671)
Q Consensus 179 ~~-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L--~~L~Ls~N~l--~g~~p~-~~~l~--------------- 237 (671)
++ .+|..|+++++|++|++++|++++ ..+..+++| +.|++++|.+ ++..|. +..+.
T Consensus 103 ~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~ 179 (520)
T 2z7x_B 103 DALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFH 179 (520)
T ss_dssp SSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCC
T ss_pred ccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchh
Confidence 87 578999999999999999999986 457778888 9999999988 555442 33321
Q ss_pred --------------------------------------------------------------------CCCEEECCCCCC
Q 005898 238 --------------------------------------------------------------------SLNVLNLSDNKL 249 (671)
Q Consensus 238 --------------------------------------------------------------------~L~~L~Ls~N~l 249 (671)
+|++|++++|++
T Consensus 180 ~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l 259 (520)
T 2z7x_B 180 FILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKL 259 (520)
T ss_dssp CCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEE
T ss_pred hhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccc
Confidence 455566666666
Q ss_pred CCCCCCCC--------CCccEEEcCCCCCCCCch-hh-------------------------hcCCcccceeeccccccc
Q 005898 250 DSNLPKLP--------RGLVMAFLSNNSFSGEIP-KQ-------------------------YGQLNQLQQLDMSFNALR 295 (671)
Q Consensus 250 ~~~~p~~~--------~~L~~l~l~~N~l~~~~p-~~-------------------------~~~l~~L~~L~Ls~N~l~ 295 (671)
+|.+|... ..|+.+++++|.+ .+| .. +..+++|++|++++|+++
T Consensus 260 ~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~ 337 (520)
T 2z7x_B 260 QGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLT 337 (520)
T ss_dssp ESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCC
T ss_pred cCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccC
Confidence 55555322 1222333333333 122 11 145556666666666666
Q ss_pred CCCccccCCCCCcCeEecccCcCcc--cCCcccCCCCCccEEECcCCcCcccCCCC-CCCCCCCceeccCCCcCCC
Q 005898 296 GMPPPAIFSLPNISDLNLASNKFSG--SLPKNLNCGGKLVFFDISNNKLTGGLPSC-LSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 296 ~~~~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~~~~L~~l~ls~N~l~g~~p~~-~~~~~~l~~l~l~~N~l~~ 368 (671)
+.+|..+..+++|+.|+|++|++++ .+|..+..+++|+.|++++|.+++.+|.. +..+++++.+++++|.+++
T Consensus 338 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 413 (520)
T 2z7x_B 338 DTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTD 413 (520)
T ss_dssp TTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCG
T ss_pred hhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCc
Confidence 6555566666666666666666665 44555666666666666666666544443 4455566666666666554
No 70
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.96 E-value=2.7e-29 Score=263.99 Aligned_cols=163 Identities=26% Similarity=0.504 Sum_probs=143.3
Q ss_pred cCCCcCceeccCCceEEEEEEEc----CCcEEEEEEccCC-chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
+.|+..+.||+|+||.||+|+.. .+..||||+++.. .....+++.+|++++++++||||++++++|.+.+
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 123 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR----- 123 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG-----
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 46778899999999999999974 3456999999764 3445678999999999999999999999997643
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 124 ---~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 195 (325)
T 3kul_A 124 ---LAMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDF 195 (325)
T ss_dssp ---CCEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred ---ccEEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCC
Confidence 5799999999999999997542 3499999999999999999999997 8999999999999999999999999
Q ss_pred CCccccc---------------------------------cccccceeeeeeeh
Q 005898 638 GLSIVSE---------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 638 Gla~~~~---------------------------------d~~s~g~~l~~~~~ 658 (671)
|+++... |+||+||++|+|++
T Consensus 196 g~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~ 249 (325)
T 3kul_A 196 GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249 (325)
T ss_dssp SSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred CcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHc
Confidence 9986421 99999999999998
No 71
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.96 E-value=5.8e-30 Score=277.08 Aligned_cols=176 Identities=19% Similarity=0.281 Sum_probs=151.1
Q ss_pred CHHHHHHHhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceee
Q 005898 474 TLEELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCI 549 (671)
Q Consensus 474 ~~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 549 (671)
.+++.....++|+..++||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.++.+++|||||++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34555556788999999999999999999975 79999999996432 122345889999999999999999999998
Q ss_pred cCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCC
Q 005898 550 DGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH 629 (671)
Q Consensus 550 ~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~ 629 (671)
+.+ ..|+||||+++|+|.+++.... ..+++..+..++.+|+.||+|||+. +|+||||||+|||+|++
T Consensus 132 ~~~--------~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~ 198 (412)
T 2vd5_A 132 DEN--------YLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRC 198 (412)
T ss_dssp CSS--------EEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred eCC--------EEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCC
Confidence 753 7899999999999999997642 2489999999999999999999987 89999999999999999
Q ss_pred CcEEEcccCCcccc--------------------------------------ccccccceeeeeeehhhhc
Q 005898 630 RIAKLSDYGLSIVS--------------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 630 ~~~ki~DfGla~~~--------------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+++||+|||+++.. .|+||+||++|||++|...
T Consensus 199 g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~P 269 (412)
T 2vd5_A 199 GHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269 (412)
T ss_dssp SCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCC
Confidence 99999999998421 1999999999999987653
No 72
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.96 E-value=3.6e-29 Score=259.13 Aligned_cols=166 Identities=17% Similarity=0.302 Sum_probs=146.3
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC---chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~------ 84 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD------ 84 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS------
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC------
Confidence 56888999999999999999964 7899999998543 2344578999999999999999999999987653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 --~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 156 (294)
T 4eqm_A 85 --CYYLVMEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFG 156 (294)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCS
T ss_pred --eEEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCC
Confidence 6899999999999999997643 489999999999999999999987 79999999999999999999999999
Q ss_pred Ccccc-------------------------------ccccccceeeeeeehhhhc
Q 005898 639 LSIVS-------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~-------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+++.. .|+||+|+++|+|+++...
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~p 211 (294)
T 4eqm_A 157 IAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211 (294)
T ss_dssp SSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence 98532 1999999999999997554
No 73
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.4e-28 Score=258.78 Aligned_cols=226 Identities=20% Similarity=0.253 Sum_probs=197.0
Q ss_pred CCCEeEEEecCCCCCCCCCCCCcccccccCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEccc
Q 005898 72 DNFITELKIIGDKPSNVGNFDGFASANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSS 151 (671)
Q Consensus 72 ~~~v~~l~l~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~ 151 (671)
..+|+.+++.+..+. .+|..++++++|++|+|++|.+. .+|..++++++|++|+|++
T Consensus 80 ~~~l~~L~L~~n~l~----------------------~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~ 136 (328)
T 4fcg_A 80 QPGRVALELRSVPLP----------------------QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLAR 136 (328)
T ss_dssp STTCCEEEEESSCCS----------------------SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEES
T ss_pred ccceeEEEccCCCch----------------------hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCC
Confidence 356788888665322 45667888999999999999998 8999999999999999999
Q ss_pred CcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCC---------CCCcCEEEcccccCCCCCcccccCCCCCCEEEec
Q 005898 152 NFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDS---------LPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLS 222 (671)
Q Consensus 152 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls 222 (671)
|+++ .+|..+.++++|++|+|++|.+.+.+|..++. +++|++|++++|+++ .+|..++++++|+.|+|+
T Consensus 137 n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~ 214 (328)
T 4fcg_A 137 NPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIR 214 (328)
T ss_dssp CCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEE
T ss_pred Cccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEcc
Confidence 9998 88999999999999999999999999988765 999999999999999 899999999999999999
Q ss_pred cCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCcccc
Q 005898 223 KNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAI 302 (671)
Q Consensus 223 ~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 302 (671)
+|.+++.++.+..+++|++|++++|++.+ .+|..++.+++|+.|++++|++.+.+|..+
T Consensus 215 ~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~---------------------~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~ 273 (328)
T 4fcg_A 215 NSPLSALGPAIHHLPKLEELDLRGCTALR---------------------NYPPIFGGRAPLKRLILKDCSNLLTLPLDI 273 (328)
T ss_dssp SSCCCCCCGGGGGCTTCCEEECTTCTTCC---------------------BCCCCTTCCCCCCEEECTTCTTCCBCCTTG
T ss_pred CCCCCcCchhhccCCCCCEEECcCCcchh---------------------hhHHHhcCCCCCCEEECCCCCchhhcchhh
Confidence 99999877788999999999998877654 456667778888888888888888888888
Q ss_pred CCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCc
Q 005898 303 FSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLT 343 (671)
Q Consensus 303 ~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~ 343 (671)
..+++|+.|+|++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 274 ~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 274 HRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp GGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 88888888888888888888888888888888888877654
No 74
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.96 E-value=3.6e-29 Score=266.59 Aligned_cols=168 Identities=23% Similarity=0.364 Sum_probs=146.9
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch------hhHHHHHHHHHHHhcCCCCCcccccceeecCCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 554 (671)
.+.|+..+.||+|+||+||+|+.. +|+.||||.+..... ...+++.+|+.+|.+++|||||++++++.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-- 88 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT-- 88 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--
Confidence 457888999999999999999965 699999999965432 13578999999999999999999999998653
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC----
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR---- 630 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~---- 630 (671)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++
T Consensus 89 ------~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 89 ------DVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp ------EEEEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred ------EEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCcc
Confidence 7899999999999999997543 489999999999999999999997 899999999999998776
Q ss_pred cEEEcccCCccccc-----------------------------cccccceeeeeeehhhhcc
Q 005898 631 IAKLSDYGLSIVSE-----------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 631 ~~ki~DfGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
.+||+|||+++... |+||+||++|+|++|....
T Consensus 157 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf 218 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218 (361)
T ss_dssp CEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred CEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence 79999999986421 9999999999999976543
No 75
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.96 E-value=1.6e-29 Score=271.94 Aligned_cols=168 Identities=23% Similarity=0.374 Sum_probs=145.1
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 556 (671)
.++|+..++||+|+||+||+|+.. +++.||||+++... ....+.+.+|..++.++ +|||||++++++.+.+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 126 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 126 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC----
Confidence 457889999999999999999975 68899999997542 22334578899998877 8999999999998753
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++||||+++|+|..++.... .+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 127 ----~~~lV~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 127 ----RLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp ----EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred ----EEEEEEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEee
Confidence 7899999999999999997643 389999999999999999999997 799999999999999999999999
Q ss_pred cCCcccc------------------------------ccccccceeeeeeehhhhcc
Q 005898 637 YGLSIVS------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 637 fGla~~~------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
||+++.. .|+||+||++|||++|....
T Consensus 197 FGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf 253 (396)
T 4dc2_A 197 YGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253 (396)
T ss_dssp CTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 9998641 19999999999999976544
No 76
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.96 E-value=2.1e-29 Score=266.75 Aligned_cols=169 Identities=23% Similarity=0.374 Sum_probs=146.1
Q ss_pred HHhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCC
Q 005898 480 EATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 480 ~~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 554 (671)
...++|+..++||+|+||.||+|+.. +|+.||||+++... ....+.+.+|.+++..+ +||||+++++++.+.+
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~-- 91 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE-- 91 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--
Confidence 34578999999999999999999975 68999999996532 22356678899998876 9999999999998753
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEE
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki 634 (671)
..++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 92 ------~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 92 ------NLFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp ------EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred ------EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEE
Confidence 7899999999999999997643 389999999999999999999997 8999999999999999999999
Q ss_pred cccCCccccc------------------------------cccccceeeeeeehhhhc
Q 005898 635 SDYGLSIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 635 ~DfGla~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+|||+++... |+||+||++|+|++|...
T Consensus 160 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P 217 (345)
T 1xjd_A 160 ADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217 (345)
T ss_dssp CCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred eEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCC
Confidence 9999986421 999999999999997543
No 77
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=2.3e-30 Score=287.09 Aligned_cols=223 Identities=22% Similarity=0.312 Sum_probs=151.6
Q ss_pred chhcccCC----CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcc
Q 005898 110 FVTTLARL----TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNW 185 (671)
Q Consensus 110 ~~~~l~~l----~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 185 (671)
+|..+..+ ++|+.|+|++|.+.+..|..|+++++|++|+|++|.+++..| +..+++|++|+|++|.+++..
T Consensus 22 l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~--- 96 (487)
T 3oja_A 22 LKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL--- 96 (487)
T ss_dssp HHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE---
T ss_pred hHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC---
Confidence 44444444 378888888888888888888888888888888888876555 888888888888888887532
Q ss_pred cCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccC-CCCCCCCCCEEECCCCCCCCCCCCCCCCccEEE
Q 005898 186 FDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAF 264 (671)
Q Consensus 186 ~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~ 264 (671)
..++|++|++++|.+++..+. .+++|+.|+|++|.+++.+| .++.+++|+.|+|++|.+++
T Consensus 97 --~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------------- 158 (487)
T 3oja_A 97 --VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT------------- 158 (487)
T ss_dssp --ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCE-------------
T ss_pred --CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCC-------------
Confidence 237888888888888865543 35678888888888887766 36677777777777776654
Q ss_pred cCCCCCCCCchhhhc-CCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCc
Q 005898 265 LSNNSFSGEIPKQYG-QLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLT 343 (671)
Q Consensus 265 l~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~ 343 (671)
.+|..+. .+++|+.|+|++|.+++.++ ...+++|+.|+|++|.+++..| .+..+++|+.|++++|.++
T Consensus 159 --------~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 159 --------VNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp --------EEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC
T ss_pred --------cChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCc
Confidence 4444443 45666666666666665532 2345666666666666665333 3555566666666666666
Q ss_pred ccCCCCCCCCCCCceeccCCCcCC
Q 005898 344 GGLPSCLSNESDKRVVKFRGNCLS 367 (671)
Q Consensus 344 g~~p~~~~~~~~l~~l~l~~N~l~ 367 (671)
+ +|..+..+++++.+++++|.+.
T Consensus 228 ~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 228 L-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp E-ECTTCCCCTTCCEEECTTCCBC
T ss_pred c-cchhhccCCCCCEEEcCCCCCc
Confidence 3 5555555666666666666554
No 78
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.96 E-value=3.2e-29 Score=265.54 Aligned_cols=166 Identities=23% Similarity=0.388 Sum_probs=145.8
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC---chhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCCc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 557 (671)
++|+..+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++.++ +|||||++++++.+.+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~----- 83 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----- 83 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC-----
Confidence 46888999999999999999975 6899999999653 233456788999999988 8999999999998653
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 84 ---~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 154 (345)
T 3a8x_A 84 ---RLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDY 154 (345)
T ss_dssp ---EEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCG
T ss_pred ---EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEec
Confidence 7899999999999999997643 389999999999999999999997 8999999999999999999999999
Q ss_pred CCcccc------------------------------ccccccceeeeeeehhhhc
Q 005898 638 GLSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 638 Gla~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|+++.. .|+||+||++|||++|...
T Consensus 155 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 209 (345)
T 3a8x_A 155 GMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 209 (345)
T ss_dssp GGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred cccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCC
Confidence 998641 1999999999999997653
No 79
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.96 E-value=2.6e-29 Score=263.63 Aligned_cols=171 Identities=22% Similarity=0.431 Sum_probs=145.5
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccce
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 561 (671)
.++|+..++||+|+||+||+|+.. ++.||||++..... ....+.+|+.++++++|||||++++++.+... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~~~ 96 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTS----VDVD 96 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS----SSEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCC----CCce
Confidence 467888999999999999999875 78999999965433 34556779999999999999999999987531 1235
Q ss_pred EEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC-------CCCccccCCCCCceeecCCCcEEE
Q 005898 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV-------IPGFFNNRVKTNNILLNEHRIAKL 634 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-------~~~iiHrDlk~~NiLl~~~~~~ki 634 (671)
.++||||+++|+|.+++... .++|..+..++.|+++||+|||+.+ .++|+||||||+||++++++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 79999999999999999763 3899999999999999999999861 247999999999999999999999
Q ss_pred cccCCccccc-------------------------------------cccccceeeeeeehhhhc
Q 005898 635 SDYGLSIVSE-------------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 635 ~DfGla~~~~-------------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+|||+++... |+||+||++|+|+++...
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~p 237 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTA 237 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTT
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCC
Confidence 9999984310 999999999999998543
No 80
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.96 E-value=1.5e-29 Score=271.60 Aligned_cols=166 Identities=23% Similarity=0.449 Sum_probs=145.3
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
..++|+..+.||+|+||.||+|+.. +++.||||.++... ....++|.+|+++|++++|||||+++++|.+.+
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 185 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ------ 185 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS------
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC------
Confidence 3457888899999999999999986 78999999997543 333567899999999999999999999997653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|.++++... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 186 --~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG 258 (377)
T 3cbl_A 186 --PIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFG 258 (377)
T ss_dssp --SCEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGG
T ss_pred --CcEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCC
Confidence 5799999999999999997532 2489999999999999999999997 79999999999999999999999999
Q ss_pred Ccccc--------------------------------ccccccceeeeeeehh
Q 005898 639 LSIVS--------------------------------EDINSVGVRLLILMSF 659 (671)
Q Consensus 639 la~~~--------------------------------~d~~s~g~~l~~~~~~ 659 (671)
+++.. .|+||+||++|||+++
T Consensus 259 ~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~ 311 (377)
T 3cbl_A 259 MSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSL 311 (377)
T ss_dssp GCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred CceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhC
Confidence 98531 1999999999999984
No 81
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=7e-29 Score=260.33 Aligned_cols=167 Identities=18% Similarity=0.269 Sum_probs=146.9
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.++|+..+.||+|+||.||+|+.. +++.||+|.+.... ...+.+.+|+++++.++||||+++++++.+.+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-------- 74 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESME-------- 74 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--------
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--------
Confidence 357888999999999999999965 68999999987543 34567899999999999999999999998753
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC--CCcEEEcccC
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE--HRIAKLSDYG 638 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~--~~~~ki~DfG 638 (671)
..++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 75 ELVMIFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEEEEECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEEEEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 7899999999999999997542 3489999999999999999999997 8999999999999987 7899999999
Q ss_pred Cccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 639 LSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+++... |+||+||++|+|+++...
T Consensus 150 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p 202 (321)
T 1tki_A 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202 (321)
T ss_dssp TCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 986531 999999999999997654
No 82
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.96 E-value=2.8e-29 Score=269.15 Aligned_cols=167 Identities=24% Similarity=0.400 Sum_probs=146.9
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++|++++|||||+++++|.+.+
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~------ 88 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE------ 88 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC------
Confidence 56888999999999999999965 68999999986432 233567899999999999999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|..++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 89 --~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG 160 (384)
T 4fr4_A 89 --DMFMVVDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFN 160 (384)
T ss_dssp --EEEEEECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred --EEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccc
Confidence 7899999999999999998643 489999999999999999999997 89999999999999999999999999
Q ss_pred Ccccc--------------------------------ccccccceeeeeeehhhhcc
Q 005898 639 LSIVS--------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 639 la~~~--------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
+++.. .|+||+||++|+|++|....
T Consensus 161 ~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf 217 (384)
T 4fr4_A 161 IAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217 (384)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred eeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCC
Confidence 98642 19999999999999976543
No 83
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=1.3e-27 Score=276.27 Aligned_cols=297 Identities=20% Similarity=0.159 Sum_probs=222.1
Q ss_pred CEeEEEecCCCCCCCCC--CCCc-ccccccCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcc
Q 005898 74 FITELKIIGDKPSNVGN--FDGF-ASANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLS 150 (671)
Q Consensus 74 ~v~~l~l~~~~~~~~~~--~~~~-~~~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls 150 (671)
.++.+++.++...+... +... .....+++.|...+..|..++++++|++|+|++|.+.+..+..|+++++|++|+|+
T Consensus 26 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 105 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLM 105 (680)
T ss_dssp TCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECC
Confidence 46777777665443221 1111 11223556666556667788999999999999999986666679999999999999
Q ss_pred cCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCccccc--CCCCCCEEEeccCcccc
Q 005898 151 SNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQ--RISTLSDLDLSKNAISG 228 (671)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~--~l~~L~~L~Ls~N~l~g 228 (671)
+|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|++++..|..+. .+++|+.|++++|.+++
T Consensus 106 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~ 185 (680)
T 1ziw_A 106 SNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKE 185 (680)
T ss_dssp SSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCC
T ss_pred CCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccc
Confidence 9999877778899999999999999999988888899999999999999999887777654 45889999999998887
Q ss_pred ccCC-CCC---------------------------CCCCCEEECCCCCCCCCCCCCC-----CCccEEEcCCCCCCCCch
Q 005898 229 SLPD-LSS---------------------------LGSLNVLNLSDNKLDSNLPKLP-----RGLVMAFLSNNSFSGEIP 275 (671)
Q Consensus 229 ~~p~-~~~---------------------------l~~L~~L~Ls~N~l~~~~p~~~-----~~L~~l~l~~N~l~~~~p 275 (671)
..|. +.. .++|+.|++++|.+++..|... .+|+.+++++|.+++..|
T Consensus 186 ~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~ 265 (680)
T 1ziw_A 186 FSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN 265 (680)
T ss_dssp BCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECT
T ss_pred cChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCc
Confidence 6653 221 1566777777777776665543 237777777777777667
Q ss_pred hhhcCCcccceeecccccccCCCcc---------------------------------ccCCCCCcCeEecccCcCcccC
Q 005898 276 KQYGQLNQLQQLDMSFNALRGMPPP---------------------------------AIFSLPNISDLNLASNKFSGSL 322 (671)
Q Consensus 276 ~~~~~l~~L~~L~Ls~N~l~~~~~~---------------------------------~~~~l~~L~~L~L~~N~l~g~~ 322 (671)
..|+.+++|++|++++|++++.+|. .+..+++|+.|++++|++++..
T Consensus 266 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~ 345 (680)
T 1ziw_A 266 DSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIK 345 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCC
T ss_pred ccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCC
Confidence 7777777777777777777666553 3455677888888889999888
Q ss_pred CcccCCCCCccEEECcCCcCcccCCC--CCC--CCCCCceeccCCCcCCCCc
Q 005898 323 PKNLNCGGKLVFFDISNNKLTGGLPS--CLS--NESDKRVVKFRGNCLSSNV 370 (671)
Q Consensus 323 p~~~~~~~~L~~l~ls~N~l~g~~p~--~~~--~~~~l~~l~l~~N~l~~~~ 370 (671)
|..+..+++|+.|++++|.+++.... .+. ..+.++.+++++|.+++..
T Consensus 346 ~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~ 397 (680)
T 1ziw_A 346 SNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIE 397 (680)
T ss_dssp TTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEEC
T ss_pred hhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEC
Confidence 88899999999999999987543221 222 1257899999999988643
No 84
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.2e-27 Score=263.06 Aligned_cols=225 Identities=25% Similarity=0.253 Sum_probs=182.1
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
++|++|+|++|++.+..|+.|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 57899999999999999999999999999999999999888899999999999999999999877788999999999999
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccccCC--CCCCCCCCEEECCCCCCCCCCCCC--CCCccEEEcCCCCCCCC
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD--LSSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGE 273 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~l~~L~~L~Ls~N~l~~~~p~~--~~~L~~l~l~~N~l~~~ 273 (671)
++|+++...+..|.++++|+.|++++|+..+.++. +..+++|++|+|++|++++. |.+ ..+|+.|++++|.+++.
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCccc
Confidence 99999976677899999999999999655455553 78999999999999998753 433 24566677777777666
Q ss_pred chhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCc
Q 005898 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLT 343 (671)
Q Consensus 274 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~ 343 (671)
.|..|..+++|+.|++++|++++.++..+..+++|+.|+|++|++++..+..+..+.+|+.|+|++|.+.
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 6666777777777777777777766666666777777777777776655556666666777777777665
No 85
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.95 E-value=3.9e-29 Score=265.33 Aligned_cols=166 Identities=18% Similarity=0.334 Sum_probs=146.7
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------ 114 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS------ 114 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC------
Confidence 57888999999999999999975 79999999986432 233567899999999999999999999998653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 115 --~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg 186 (350)
T 1rdq_E 115 --NLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186 (350)
T ss_dssp --EEEEEEECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred --EEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccc
Confidence 7899999999999999998643 389999999999999999999987 89999999999999999999999999
Q ss_pred Cccccc---------------------------cccccceeeeeeehhhhc
Q 005898 639 LSIVSE---------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~~---------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+++... |+||+||++|+|++|...
T Consensus 187 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P 237 (350)
T 1rdq_E 187 FAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237 (350)
T ss_dssp TCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCC
Confidence 986431 999999999999997543
No 86
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.95 E-value=4e-29 Score=262.38 Aligned_cols=166 Identities=24% Similarity=0.393 Sum_probs=144.0
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch-hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
++|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.+++.++|||||++++++.+.+
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-------- 78 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-------- 78 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS--------
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--------
Confidence 57888999999999999999975 789999999865432 23467899999999999999999999998753
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla 640 (671)
..++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a 152 (323)
T 3tki_A 79 IQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA 152 (323)
T ss_dssp EEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeecc
Confidence 689999999999999998754 3489999999999999999999987 8999999999999999999999999998
Q ss_pred ccc---------------------------------ccccccceeeeeeehhhhc
Q 005898 641 IVS---------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 641 ~~~---------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+.. .|+||+||++|+|+++...
T Consensus 153 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p 207 (323)
T 3tki_A 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207 (323)
T ss_dssp EECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred ceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCC
Confidence 532 1999999999999997654
No 87
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.95 E-value=5.6e-29 Score=260.65 Aligned_cols=171 Identities=25% Similarity=0.346 Sum_probs=148.0
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
+.|+..++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+... .
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------~ 82 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT------R 82 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT------C
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCC------c
Confidence 46888899999999999999975 58999999997543 2345778899999999999999999999876532 2
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee----cCCCcEEEcc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL----NEHRIAKLSD 636 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl----~~~~~~ki~D 636 (671)
..++||||+++|+|.+++........+++.++..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEcc
Confidence 5799999999999999998654444599999999999999999999997 89999999999999 7888999999
Q ss_pred cCCcccc-------------------------------------ccccccceeeeeeehhhhc
Q 005898 637 YGLSIVS-------------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~-------------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
||+++.. .|+||+||++|+|+++...
T Consensus 160 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~p 222 (319)
T 4euu_A 160 FGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222 (319)
T ss_dssp CTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9998541 2999999999999997654
No 88
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.95 E-value=3.6e-29 Score=267.28 Aligned_cols=169 Identities=17% Similarity=0.260 Sum_probs=144.1
Q ss_pred HhcCCCcCceeccCCceEEEEEE------EcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCC---CCCcccccceeecC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGR------LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR---HPHLVCLLGHCIDG 551 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~ 551 (671)
..+.|...+.||+|+||+||+|+ ..+++.||||++.... ..++.+|++++..++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678889999999999999994 4568999999997553 356778888888887 99999999999875
Q ss_pred CCCCCcccceEEEEEecCCCCChhhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC-
Q 005898 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISEN--TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE- 628 (671)
Q Consensus 552 ~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~- 628 (671)
+ ..++|||||++|+|.+++... .....++|..+..++.|+++||+|||+. +|+||||||+|||++.
T Consensus 140 ~--------~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~ 208 (365)
T 3e7e_A 140 N--------GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNG 208 (365)
T ss_dssp S--------CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGG
T ss_pred C--------CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEeccc
Confidence 4 679999999999999999742 1245699999999999999999999997 7999999999999998
Q ss_pred ----------CCcEEEcccCCccccc--------------------------------cccccceeeeeeehhhhcc
Q 005898 629 ----------HRIAKLSDYGLSIVSE--------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 629 ----------~~~~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
++.+||+|||+|+... |+||+||++|||++|.+..
T Consensus 209 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf 285 (365)
T 3e7e_A 209 FLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMK 285 (365)
T ss_dssp GTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcc
Confidence 8999999999995321 9999999999999987543
No 89
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.95 E-value=4.7e-29 Score=262.34 Aligned_cols=166 Identities=25% Similarity=0.449 Sum_probs=138.6
Q ss_pred hcCCCcCceeccCCceEEEEEEE----cCCcEEEEEEccCCc----hhhHHHHHHHHHHHhcCCCCCcccccceeecCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL----ENGTSVAIRCLPSSK----KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGG 553 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 553 (671)
.++|+..+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG- 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC-
Confidence 35688899999999999999986 478999999997542 223456889999999999999999999998653
Q ss_pred CCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEE
Q 005898 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAK 633 (671)
Q Consensus 554 ~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~k 633 (671)
..++||||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 95 -------~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 95 -------KLYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp -------CEEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEE
T ss_pred -------EEEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEE
Confidence 6899999999999999997643 388999999999999999999997 899999999999999999999
Q ss_pred EcccCCcccc------------------------------ccccccceeeeeeehhhh
Q 005898 634 LSDYGLSIVS------------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 634 i~DfGla~~~------------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
|+|||+++.. .|+||+||++|+|+++..
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 219 (327)
T 3a62_A 162 LTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219 (327)
T ss_dssp ECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred EEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCC
Confidence 9999998531 199999999999999754
No 90
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=270.15 Aligned_cols=296 Identities=21% Similarity=0.207 Sum_probs=204.6
Q ss_pred CEeEEEecCCCCCCCC--CCCCcc-cccccCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcc
Q 005898 74 FITELKIIGDKPSNVG--NFDGFA-SANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLS 150 (671)
Q Consensus 74 ~v~~l~l~~~~~~~~~--~~~~~~-~~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls 150 (671)
.++.+++.++...+.. .+.+.. ....+++.|...+..+..|.++++|++|+|++|.+.+..|..|+++++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 4666777665543221 122211 1223455554444445678888888888888888888777888888888888888
Q ss_pred cCcCCCCCCccCCCCCccCEEEccCCcCCC-CCCcccCCCCCcCEEEcccccCCCCCcccccCCCCC----CEEEeccCc
Q 005898 151 SNFLFGSVPPKISTMVKLQTLILDDNFFNN-TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTL----SDLDLSKNA 225 (671)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L----~~L~Ls~N~ 225 (671)
+|++++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..++.+++| +.|++++|.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 888876555578888888888888888876 468888888888888888888776555444444333 334443333
Q ss_pred --------------------------------------------------------------------------------
Q 005898 226 -------------------------------------------------------------------------------- 225 (671)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (671)
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence
Q ss_pred -------------------------cccccCCCCC------------------------------------------CCC
Q 005898 226 -------------------------ISGSLPDLSS------------------------------------------LGS 238 (671)
Q Consensus 226 -------------------------l~g~~p~~~~------------------------------------------l~~ 238 (671)
+++..+.+.. +++
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 348 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 348 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTT
T ss_pred hhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCC
Confidence 3321111111 222
Q ss_pred CCEEECCCCCCCCCC--CC---CCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCc-cccCCCCCcCeEe
Q 005898 239 LNVLNLSDNKLDSNL--PK---LPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPP-PAIFSLPNISDLN 312 (671)
Q Consensus 239 L~~L~Ls~N~l~~~~--p~---~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~ 312 (671)
|+.|++++|++++.. |. -..+|+.+++++|.+++..+ .+..+++|+.|++++|.+++.++ ..+..+++|+.|+
T Consensus 349 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 427 (570)
T 2z63_A 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 427 (570)
T ss_dssp CCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEE
T ss_pred CCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEe
Confidence 223333333222211 00 01345555555555554333 37788899999999999998876 5688999999999
Q ss_pred cccCcCcccCCcccCCCCCccEEECcCCcCc-ccCCCCCCCCCCCceeccCCCcCCCCc
Q 005898 313 LASNKFSGSLPKNLNCGGKLVFFDISNNKLT-GGLPSCLSNESDKRVVKFRGNCLSSNV 370 (671)
Q Consensus 313 L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~-g~~p~~~~~~~~l~~l~l~~N~l~~~~ 370 (671)
+++|.+++.+|..+..+++|+.|++++|.++ +.+|..+..+++++.+++++|.+++..
T Consensus 428 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 486 (570)
T 2z63_A 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS 486 (570)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred CcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCC
Confidence 9999999999999999999999999999998 689999999999999999999988643
No 91
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.95 E-value=1.2e-28 Score=265.07 Aligned_cols=168 Identities=19% Similarity=0.343 Sum_probs=148.1
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.+.|+..+.||+|+||.||+|+.. +|+.||+|.+..........+.+|+++|++++|||||++++++.+..
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-------- 121 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY-------- 121 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--------
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--------
Confidence 467899999999999999999965 78999999998765555678999999999999999999999998653
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC--CCcEEEcccC
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE--HRIAKLSDYG 638 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~--~~~~ki~DfG 638 (671)
..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 122 ~~~lv~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 122 EMVLILEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEEEEECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEEEEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecc
Confidence 7899999999999999987532 3489999999999999999999987 8999999999999974 5789999999
Q ss_pred Cccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 639 LSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+++... |+||+||++|+|++|...
T Consensus 197 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P 249 (387)
T 1kob_A 197 LATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249 (387)
T ss_dssp TCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCS
T ss_pred cceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCC
Confidence 986432 999999999999997653
No 92
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.95 E-value=2.3e-29 Score=267.89 Aligned_cols=176 Identities=24% Similarity=0.434 Sum_probs=150.0
Q ss_pred cCHHHHHHHhcCCCcCceeccCCceEEEEEEE------cCCcEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCCCcccc
Q 005898 473 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCL 544 (671)
Q Consensus 473 ~~~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l 544 (671)
+...++....++|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++.++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455566678899999999999999999974 246799999997643 33457799999999999 79999999
Q ss_pred cceeecCCCCCCcccceEEEEEecCCCCChhhhhhcCCC-----------------------------------------
Q 005898 545 LGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTP----------------------------------------- 583 (671)
Q Consensus 545 ~g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~----------------------------------------- 583 (671)
+++|.+.+ ...++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~-------~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (359)
T 3vhe_A 92 LGACTKPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSAS 164 (359)
T ss_dssp EEEECSTT-------SCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------
T ss_pred eeeeecCC-------CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccc
Confidence 99998754 247999999999999999975431
Q ss_pred ----------------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCcc
Q 005898 584 ----------------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (671)
Q Consensus 584 ----------------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~ 641 (671)
...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 241 (359)
T 3vhe_A 165 SGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 241 (359)
T ss_dssp -------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred cccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEecccee
Confidence 12289999999999999999999997 79999999999999999999999999986
Q ss_pred ccc--------------------------------cccccceeeeeeeh
Q 005898 642 VSE--------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 642 ~~~--------------------------------d~~s~g~~l~~~~~ 658 (671)
... |+||+||++|+|++
T Consensus 242 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt 290 (359)
T 3vhe_A 242 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290 (359)
T ss_dssp CTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred eecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHh
Confidence 421 99999999999998
No 93
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.9e-28 Score=259.02 Aligned_cols=250 Identities=19% Similarity=0.214 Sum_probs=214.0
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
++|++|+|++|.+.+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|+++++|++|++
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 48999999999998877778999999999999999999888889999999999999999999765566999999999999
Q ss_pred ccccCCCCCcc--cccCCCCCCEEEeccCc-cccccC-CCCCCCCCCEEECCCCCCCCCCCCCC---CCccEEEcCCCCC
Q 005898 198 RNNKLAGPFPS--SIQRISTLSDLDLSKNA-ISGSLP-DLSSLGSLNVLNLSDNKLDSNLPKLP---RGLVMAFLSNNSF 270 (671)
Q Consensus 198 ~~N~l~g~~p~--~l~~l~~L~~L~Ls~N~-l~g~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~L~~l~l~~N~l 270 (671)
++|++++ +|. .+..+++|+.|++++|. +++..+ .+..+++|+.|++++|++++..|... .+|+.+++++|.+
T Consensus 132 ~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 132 LGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp TTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred CCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 9999985 554 78999999999999994 666555 48899999999999999998777643 5688999999999
Q ss_pred CCCchhhhcCCcccceeecccccccCCCccccC---CCCCcCeEecccCcCcc----cCCcccCCCCCccEEECcCCcCc
Q 005898 271 SGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIF---SLPNISDLNLASNKFSG----SLPKNLNCGGKLVFFDISNNKLT 343 (671)
Q Consensus 271 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~g----~~p~~~~~~~~L~~l~ls~N~l~ 343 (671)
+...+..+..+++|+.|++++|.+++.++..+. ..+.++.++|++|.+++ .+|..+..+++|+.||+++|+++
T Consensus 211 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 211 ILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp TTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred ccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 744444456789999999999999998766543 45778899999999887 47888889999999999999999
Q ss_pred ccCCCC-CCCCCCCceeccCCCcCCCC
Q 005898 344 GGLPSC-LSNESDKRVVKFRGNCLSSN 369 (671)
Q Consensus 344 g~~p~~-~~~~~~l~~l~l~~N~l~~~ 369 (671)
.+|.. +..+++++.+++++|.+.+.
T Consensus 291 -~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 291 -SVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp -CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred -ccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 67766 48899999999999998864
No 94
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.95 E-value=7.8e-29 Score=252.85 Aligned_cols=163 Identities=23% Similarity=0.439 Sum_probs=145.0
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccceE
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 562 (671)
++|+..+.||+|+||.||+|+..+++.||||++..... ..+++.+|++++++++||||+++++++.+.+ ..
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~~ 80 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--------PI 80 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--------SE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--------ce
Confidence 46788899999999999999988889999999975432 3467999999999999999999999997653 58
Q ss_pred EEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCccc
Q 005898 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (671)
Q Consensus 563 ~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~ 642 (671)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 155 (269)
T 4hcu_A 81 CLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRF 155 (269)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEEeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccc
Confidence 99999999999999997543 3589999999999999999999987 799999999999999999999999999863
Q ss_pred cc-------------------------------cccccceeeeeeehh
Q 005898 643 SE-------------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 643 ~~-------------------------------d~~s~g~~l~~~~~~ 659 (671)
.. |+||+|+++|+|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~ 203 (269)
T 4hcu_A 156 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 203 (269)
T ss_dssp BCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcC
Confidence 21 999999999999983
No 95
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.95 E-value=7.8e-29 Score=260.53 Aligned_cols=166 Identities=22% Similarity=0.375 Sum_probs=145.8
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch------hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 555 (671)
+.|+..+.||+|+||.||+|+.. +|+.||||.+..... ...+++.+|++++++++||||+++++++.+..
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 87 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--- 87 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 45888999999999999999975 689999999865322 13678999999999999999999999998653
Q ss_pred CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC----c
Q 005898 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR----I 631 (671)
Q Consensus 556 ~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~----~ 631 (671)
..++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++ .
T Consensus 88 -----~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~ 156 (326)
T 2y0a_A 88 -----DVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 156 (326)
T ss_dssp -----EEEEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCC
T ss_pred -----EEEEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCC
Confidence 689999999999999999754 3489999999999999999999987 899999999999999877 8
Q ss_pred EEEcccCCccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 632 AKLSDYGLSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 632 ~ki~DfGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+||+|||+++..+ |+||+||++|+|+++...
T Consensus 157 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p 216 (326)
T 2y0a_A 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216 (326)
T ss_dssp EEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred EEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCC
Confidence 9999999986431 999999999999997654
No 96
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.95 E-value=1e-28 Score=263.48 Aligned_cols=167 Identities=22% Similarity=0.426 Sum_probs=145.9
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~------ 101 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES------ 101 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC------
Confidence 467899999999999999999965 68999999996542 334567899999999999999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCC---CcEEEc
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH---RIAKLS 635 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~ki~ 635 (671)
..++||||+++|+|.+++.... .+++.++..++.||++||+|||+. +|+||||||+||+++.+ +.+||+
T Consensus 102 --~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~ 173 (362)
T 2bdw_A 102 --FHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLA 173 (362)
T ss_dssp --EEEEEECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEEC
T ss_pred --EEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEe
Confidence 6899999999999999987543 489999999999999999999997 89999999999999865 459999
Q ss_pred ccCCccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 636 DYGLSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 636 DfGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
|||+++... |+||+||++|+|++|...
T Consensus 174 DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~P 229 (362)
T 2bdw_A 174 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229 (362)
T ss_dssp CCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999985421 999999999999998654
No 97
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=9.1e-28 Score=273.30 Aligned_cols=259 Identities=21% Similarity=0.171 Sum_probs=218.5
Q ss_pred cCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCC
Q 005898 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (671)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (671)
+++.|...+..+..++++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+|++|.++
T Consensus 81 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 160 (597)
T 3oja_B 81 NLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE 160 (597)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCC
Confidence 45555555555568999999999999999999998999999999999999999998666666799999999999999999
Q ss_pred CCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCcccc-------------------ccCCCCCCCCCC
Q 005898 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISG-------------------SLPDLSSLGSLN 240 (671)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g-------------------~~p~~~~l~~L~ 240 (671)
+..|..|+++++|++|++++|.+++.. ++.+++|+.|++++|.+++ ..+. ..++|+
T Consensus 161 ~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~--~~~~L~ 235 (597)
T 3oja_B 161 RIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP--VNVELT 235 (597)
T ss_dssp BCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECS--CCSCCC
T ss_pred CCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccc--cCCCCC
Confidence 999999999999999999999998653 3445555555555555543 2222 236899
Q ss_pred EEECCCCCCCCCCCCC--CCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcC
Q 005898 241 VLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKF 318 (671)
Q Consensus 241 ~L~Ls~N~l~~~~p~~--~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 318 (671)
.|+|++|.+++. +.+ ..+|+.|++++|.+++.+|..|+.+++|+.|+|++|.+++. |..+..+++|+.|+|++|.+
T Consensus 236 ~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l 313 (597)
T 3oja_B 236 ILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHL 313 (597)
T ss_dssp EEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCC
T ss_pred EEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCC
Confidence 999999999874 322 46899999999999999999999999999999999999996 44667899999999999999
Q ss_pred cccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCCC
Q 005898 319 SGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSN 369 (671)
Q Consensus 319 ~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 369 (671)
+ .+|..+..+++|+.|++++|.+++. | +..++.++.+++++|.+++.
T Consensus 314 ~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 314 L-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp C-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred C-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 9 6788888899999999999999865 3 56678899999999988753
No 98
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=6.3e-28 Score=272.77 Aligned_cols=247 Identities=18% Similarity=0.126 Sum_probs=183.2
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
++|++|+|++|.+.+..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|.++ .+|.. .+++|++|++
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 78999999999999988899999999999999999999988999999999999999999999 67776 8999999999
Q ss_pred ccccCCC-CCcccccCCCCCCEEEeccCccccccCCCCCCCCC--CEEECCCCCC--CCCCCCCC---------------
Q 005898 198 RNNKLAG-PFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSL--NVLNLSDNKL--DSNLPKLP--------------- 257 (671)
Q Consensus 198 ~~N~l~g-~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L--~~L~Ls~N~l--~~~~p~~~--------------- 257 (671)
++|++++ .+|..++++++|++|++++|.+++. .+..+++| +.|++++|++ ++..|...
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n 206 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPN 206 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC--chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCc
Confidence 9999997 5678999999999999999999762 34444555 8888888877 44433210
Q ss_pred ---------------------------------------------------------------------CCccEEEcCCC
Q 005898 258 ---------------------------------------------------------------------RGLVMAFLSNN 268 (671)
Q Consensus 258 ---------------------------------------------------------------------~~L~~l~l~~N 268 (671)
.+|+.+++++|
T Consensus 207 ~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n 286 (562)
T 3a79_B 207 SLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNL 286 (562)
T ss_dssp SCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEE
T ss_pred cchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEecc
Confidence 14555666666
Q ss_pred CCCCCchhhh-----------------------------------------------------cCCcccceeeccccccc
Q 005898 269 SFSGEIPKQY-----------------------------------------------------GQLNQLQQLDMSFNALR 295 (671)
Q Consensus 269 ~l~~~~p~~~-----------------------------------------------------~~l~~L~~L~Ls~N~l~ 295 (671)
.++|.+|..+ +.+++|++|++++|+++
T Consensus 287 ~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~ 366 (562)
T 3a79_B 287 TITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFT 366 (562)
T ss_dssp EECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCC
T ss_pred EeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccc
Confidence 6666665544 45556666666666666
Q ss_pred CCCccccCCCCCcCeEecccCcCcc--cCCcccCCCCCccEEECcCCcCcccCCCC-CCCCCCCceeccCCCcCCCC
Q 005898 296 GMPPPAIFSLPNISDLNLASNKFSG--SLPKNLNCGGKLVFFDISNNKLTGGLPSC-LSNESDKRVVKFRGNCLSSN 369 (671)
Q Consensus 296 ~~~~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~~~~L~~l~ls~N~l~g~~p~~-~~~~~~l~~l~l~~N~l~~~ 369 (671)
+.+|..+..+++|+.|+|++|++++ .+|..+..+++|+.|++++|++++.+|.. +..+++++.+++++|.+++.
T Consensus 367 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 443 (562)
T 3a79_B 367 DSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443 (562)
T ss_dssp TTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGG
T ss_pred cchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcc
Confidence 6666666666666666666666664 33445566666666666666666544442 45556666666666666543
No 99
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.95 E-value=7e-29 Score=259.10 Aligned_cols=167 Identities=25% Similarity=0.373 Sum_probs=143.6
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCch--hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++|+..+.||+|+||+||+|+..+|+.||||++..... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------- 92 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER------- 92 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS-------
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC-------
Confidence 356888999999999999999988899999999864432 23467889999999999999999999997653
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++ +|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 93 -~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 165 (311)
T 3niz_A 93 -CLTLVFEFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGL 165 (311)
T ss_dssp -CEEEEEECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred -EEEEEEcCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcC
Confidence 68999999985 8888876543 3489999999999999999999987 899999999999999999999999999
Q ss_pred ccccc-------------------------------cccccceeeeeeehhhhc
Q 005898 640 SIVSE-------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~~-------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
++... |+||+||++|+|+++...
T Consensus 166 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p 219 (311)
T 3niz_A 166 ARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219 (311)
T ss_dssp CEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCC
Confidence 85421 999999999999997643
No 100
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.95 E-value=3.6e-29 Score=275.28 Aligned_cols=167 Identities=19% Similarity=0.453 Sum_probs=146.7
Q ss_pred HHHhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 479 KEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 479 ~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
....++|+..+.||+|+||.||+|+..++..||||+++... ...++|.+|+++|++++|||||++++++.+.
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~------- 255 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKE------- 255 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSS-------
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCC-------
Confidence 34456788899999999999999999888999999997643 3467899999999999999999999998632
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++|||||++|+|.++++... ...+++.++..++.||++||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 256 --~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG 329 (454)
T 1qcf_A 256 --PIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFG 329 (454)
T ss_dssp --SCEEEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTT
T ss_pred --ccEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCC
Confidence 5799999999999999997431 12478999999999999999999997 79999999999999999999999999
Q ss_pred Cccccc-------------------------------cccccceeeeeeehh
Q 005898 639 LSIVSE-------------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 639 la~~~~-------------------------------d~~s~g~~l~~~~~~ 659 (671)
+++... |+||+||++|||+++
T Consensus 330 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~ 381 (454)
T 1qcf_A 330 LARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTY 381 (454)
T ss_dssp GGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhC
Confidence 997531 999999999999993
No 101
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=261.34 Aligned_cols=225 Identities=26% Similarity=0.234 Sum_probs=175.5
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
++++.|+|++|++.+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++...+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 57899999999999988899999999999999999999888889999999999999999999777778999999999999
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccccCC--CCCCCCCCEEECCCCCCCCCCCCC--CCCccEEEcCCCCCCCC
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD--LSSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGE 273 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~l~~L~~L~Ls~N~l~~~~p~~--~~~L~~l~l~~N~l~~~ 273 (671)
++|+++...+..|.++++|+.|+|++|+..+.++. +..+++|++|+|++|+++. +|.+ ..+|+.|+|++|.+++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCcc
Confidence 99999977777899999999999999655555553 7889999999999998874 3433 23566666666666655
Q ss_pred chhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCc
Q 005898 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLT 343 (671)
Q Consensus 274 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~ 343 (671)
.|..|..+++|+.|+|++|++++.++..+..+++|+.|+|++|++++..+..+..+.+|+.|+|++|.+.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 5666666666666666666666666666666666666666666666555555555666666666666654
No 102
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.95 E-value=8.5e-29 Score=271.93 Aligned_cols=164 Identities=26% Similarity=0.530 Sum_probs=144.8
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccce
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 561 (671)
.++|+..+.||+|+||.||+|+.. |+.||||+++... ..++|.+|+++|++++|||||+++++|.+.+ ..
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------~~ 261 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-------GG 261 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT-------SC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC-------Cc
Confidence 456888899999999999999875 7899999997653 4568999999999999999999999987653 25
Q ss_pred EEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCcc
Q 005898 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~ 641 (671)
.++|||||++|+|.++++... ...+++..+..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 262 ~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 337 (450)
T 1k9a_A 262 LYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 337 (450)
T ss_dssp EEEEEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred eEEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence 899999999999999998643 23479999999999999999999997 89999999999999999999999999986
Q ss_pred ccc---------------------------cccccceeeeeeehh
Q 005898 642 VSE---------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 642 ~~~---------------------------d~~s~g~~l~~~~~~ 659 (671)
... |+||+||++|||+++
T Consensus 338 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~ 382 (450)
T 1k9a_A 338 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 382 (450)
T ss_dssp ECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTT
T ss_pred cccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence 422 999999999999983
No 103
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.95 E-value=5.2e-29 Score=264.52 Aligned_cols=168 Identities=20% Similarity=0.319 Sum_probs=146.3
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRD 555 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 555 (671)
..++|+..++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|..++..+ +||||+++++++.+.+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--- 94 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 94 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS---
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC---
Confidence 3467999999999999999999976 58899999996532 23356788999999988 7999999999987653
Q ss_pred CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEc
Q 005898 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (671)
Q Consensus 556 ~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~ 635 (671)
..|+||||+++|+|.+++.... .+++..+..++.+|+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 95 -----~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 95 -----RLYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp -----EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred -----EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEE
Confidence 7899999999999999998643 389999999999999999999997 89999999999999999999999
Q ss_pred ccCCccccc------------------------------cccccceeeeeeehhhhc
Q 005898 636 DYGLSIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 636 DfGla~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
|||+++... |+||+||++|||++|...
T Consensus 164 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~P 220 (353)
T 2i0e_A 164 DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220 (353)
T ss_dssp CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCS
T ss_pred eCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCC
Confidence 999986421 999999999999997543
No 104
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.95 E-value=7.1e-29 Score=265.72 Aligned_cols=163 Identities=21% Similarity=0.352 Sum_probs=138.8
Q ss_pred cCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccceEEEE
Q 005898 487 MSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLV 565 (671)
Q Consensus 487 ~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~~Lv 565 (671)
..++||+|+||.||+|+.. +|+.||||++........+++.+|+++|++++|||||+++++|.+.+ ..++|
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--------~~~lv 164 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN--------DIVLV 164 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--------EEEEE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--------EEEEE
Confidence 3568999999999999964 79999999998766566788999999999999999999999998753 68999
Q ss_pred EecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee--cCCCcEEEcccCCcccc
Q 005898 566 YEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL--NEHRIAKLSDYGLSIVS 643 (671)
Q Consensus 566 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl--~~~~~~ki~DfGla~~~ 643 (671)
|||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++ ++++.+||+|||+++..
T Consensus 165 ~E~~~~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~ 239 (373)
T 2x4f_A 165 MEYVDGGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239 (373)
T ss_dssp EECCTTCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEEC
T ss_pred EeCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceec
Confidence 99999999999887532 3489999999999999999999997 79999999999999 56789999999998642
Q ss_pred c-----------------------------cccccceeeeeeehhhhc
Q 005898 644 E-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 644 ~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
. |+||+||++|+|+++...
T Consensus 240 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p 287 (373)
T 2x4f_A 240 KPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287 (373)
T ss_dssp CTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCC
Confidence 1 999999999999997653
No 105
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=4.2e-28 Score=252.42 Aligned_cols=231 Identities=25% Similarity=0.239 Sum_probs=176.8
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCC--CCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEE
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFG--SVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFL 195 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (671)
++|++|+|++|.+....+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 578899999999875444557899999999999998863 33666777888999999998887 467778888899999
Q ss_pred EcccccCCCCCc-ccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCC
Q 005898 196 SMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGE 273 (671)
Q Consensus 196 ~L~~N~l~g~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~ 273 (671)
++++|++++..+ ..+..+++|++|++++|.+++..+. +..+++|++|++++|.+++. .
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--------------------~ 166 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN--------------------F 166 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG--------------------E
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc--------------------c
Confidence 999888886554 5788888888888888888877765 67788888888888776531 2
Q ss_pred chhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCC
Q 005898 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNE 353 (671)
Q Consensus 274 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~ 353 (671)
+|..+..+++|++|++++|++++.+|..+..+++|+.|+|++|++++..+..+..+++|+.||+++|++++..|..+..+
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 45556667777777777777777777777777777777777777776666667777777777777777777777777666
Q ss_pred -CCCceeccCCCcCCCC
Q 005898 354 -SDKRVVKFRGNCLSSN 369 (671)
Q Consensus 354 -~~l~~l~l~~N~l~~~ 369 (671)
++++.+++++|.+++.
T Consensus 247 ~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 247 PSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CTTCCEEECTTCCEECS
T ss_pred hccCCEEEccCCCeecc
Confidence 3677777777777653
No 106
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.1e-29 Score=263.18 Aligned_cols=245 Identities=23% Similarity=0.245 Sum_probs=161.8
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcC-CCCCCccCC-------CCCccCEEEccCCcCCCCCCcc
Q 005898 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFL-FGSVPPKIS-------TMVKLQTLILDDNFFNNTIPNW 185 (671)
Q Consensus 114 l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~ 185 (671)
++..++|+.|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34445556666666665 555544433 55666666665 334454444 5566666666666666555555
Q ss_pred c--CCCCCcCEEEcccccCCCCCcccccCC-----CCCCEEEeccCccccccC-CCCCCCCCCEEECCCCCCCCCC----
Q 005898 186 F--DSLPSLTFLSMRNNKLAGPFPSSIQRI-----STLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNL---- 253 (671)
Q Consensus 186 ~--~~l~~L~~L~L~~N~l~g~~p~~l~~l-----~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~~~~---- 253 (671)
+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..| .+..+++|++|++++|++.+.+
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 4 5566666666666666554 5555554 566666666666655553 3555666666666666654431
Q ss_pred ---CCCCCCccEEEcCCCCCCC--Cch-hhhcCCcccceeecccccccCCCc-cccCCCCCcCeEecccCcCcccCCccc
Q 005898 254 ---PKLPRGLVMAFLSNNSFSG--EIP-KQYGQLNQLQQLDMSFNALRGMPP-PAIFSLPNISDLNLASNKFSGSLPKNL 326 (671)
Q Consensus 254 ---p~~~~~L~~l~l~~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~g~~p~~~ 326 (671)
+.-..+|+.+++++|++++ .++ ..+..+++|+.|++++|++++.+| +.+..+++|+.|+|++|+++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 1223456666666666662 223 345678999999999999999875 45667899999999999998 788877
Q ss_pred CCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 327 NCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 327 ~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
. .+|+.||+++|++++. |. +..+++++.+++++|.+++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 6 7899999999999976 66 8888999999999998875
No 107
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.95 E-value=8e-29 Score=256.81 Aligned_cols=168 Identities=23% Similarity=0.362 Sum_probs=140.8
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch--------------------------hhHHHHHHHHHHHh
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--------------------------YTVRNLKLRLDLLA 534 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~--------------------------~~~~~~~~E~~~l~ 534 (671)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357888999999999999999964 689999999865421 11356889999999
Q ss_pred cCCCCCcccccceeecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 005898 535 KLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGF 614 (671)
Q Consensus 535 ~l~H~niv~l~g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~i 614 (671)
+++||||+++++++.+..+ ...++||||+++|+|.+++.. ..+++.++..++.|+++||+|||+. +|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~------~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNE------DHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KI 158 (298)
T ss_dssp TCCCTTBCCEEEEEECSSS------SEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hCCCCCCCeEEEEEEcCCC------CEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---Ce
Confidence 9999999999999986421 368999999999999886543 3489999999999999999999997 89
Q ss_pred cccCCCCCceeecCCCcEEEcccCCcccc---------------------------------ccccccceeeeeeehhhh
Q 005898 615 FNNRVKTNNILLNEHRIAKLSDYGLSIVS---------------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 615 iHrDlk~~NiLl~~~~~~ki~DfGla~~~---------------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
+||||||+||+++.++.+||+|||+++.. .|+||+||++|+|+++..
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 238 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSC
T ss_pred eccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 99999999999999999999999988531 199999999999999764
Q ss_pred c
Q 005898 662 G 662 (671)
Q Consensus 662 ~ 662 (671)
.
T Consensus 239 p 239 (298)
T 2zv2_A 239 P 239 (298)
T ss_dssp S
T ss_pred C
Confidence 3
No 108
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.95 E-value=2.6e-28 Score=274.92 Aligned_cols=267 Identities=22% Similarity=0.222 Sum_probs=206.6
Q ss_pred ccCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcC
Q 005898 99 ASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFF 178 (671)
Q Consensus 99 ~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 178 (671)
.+++.|...+..|..+.++++|++|+|++|.+.+..|+.|+++++|++|||++|++++..|..|+++++|++|+|++|.+
T Consensus 31 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 110 (549)
T 2z81_A 31 LDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPY 110 (549)
T ss_dssp EECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCC
T ss_pred EECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcc
Confidence 35666665555577899999999999999999999999999999999999999999987777899999999999999999
Q ss_pred CC-CCCcccCCCCCcCEEEcccccCCCCCc-ccccCCCCCCEEEeccCccccccCC-CC---------------------
Q 005898 179 NN-TIPNWFDSLPSLTFLSMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISGSLPD-LS--------------------- 234 (671)
Q Consensus 179 ~~-~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~-~~--------------------- 234 (671)
++ .+|..++++++|++|++++|++.+.+| ..+..+++|++|++++|.+++.+|. +.
T Consensus 111 ~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~ 190 (549)
T 2z81_A 111 QTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEI 190 (549)
T ss_dssp SSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHH
T ss_pred cccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchh
Confidence 87 467889999999999999999666666 5899999999999999999987664 33
Q ss_pred ---CCCCCCEEECCCCCCCCCC----C--CCC------------------------------------------------
Q 005898 235 ---SLGSLNVLNLSDNKLDSNL----P--KLP------------------------------------------------ 257 (671)
Q Consensus 235 ---~l~~L~~L~Ls~N~l~~~~----p--~~~------------------------------------------------ 257 (671)
.+++|++|++++|++++.. + ...
T Consensus 191 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~ 270 (549)
T 2z81_A 191 FADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFN 270 (549)
T ss_dssp HHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCC
T ss_pred hHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccccccc
Confidence 3567888888888877631 0 001
Q ss_pred ---------------------------------------CCccEEEcCCCCCCCCchhhh-cCCcccceeecccccccCC
Q 005898 258 ---------------------------------------RGLVMAFLSNNSFSGEIPKQY-GQLNQLQQLDMSFNALRGM 297 (671)
Q Consensus 258 ---------------------------------------~~L~~l~l~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~ 297 (671)
..++.+++++|.++ .+|..+ ..+++|+.|++++|++++.
T Consensus 271 ~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~ 349 (549)
T 2z81_A 271 PSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEE 349 (549)
T ss_dssp CCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHH
T ss_pred ccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccc
Confidence 12444555555554 355544 4677788888888887776
Q ss_pred Ccc---ccCCCCCcCeEecccCcCcccCC--cccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCC
Q 005898 298 PPP---AIFSLPNISDLNLASNKFSGSLP--KNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (671)
Q Consensus 298 ~~~---~~~~l~~L~~L~L~~N~l~g~~p--~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (671)
.|+ .+..+++|+.|+|++|++++..+ ..+..+++|+.||+++|+++ .+|..+..+++++.+++++|.++
T Consensus 350 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~ 423 (549)
T 2z81_A 350 YLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR 423 (549)
T ss_dssp HHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS
T ss_pred cccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc
Confidence 532 35677778888888887775432 34667777888888888877 57777777777888888887766
No 109
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.95 E-value=5.7e-29 Score=276.50 Aligned_cols=165 Identities=25% Similarity=0.495 Sum_probs=146.4
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
..+|+..+.||+|+||.||+|+.. ++..||||.++.... ..++|.+|+++|++++|||||+++++|.+.+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-------- 289 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-------- 289 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--------
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--------
Confidence 456888899999999999999976 488999999976433 4678999999999999999999999997653
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla 640 (671)
..++|||||++|+|.++++... ...+++..+..++.||++||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred cEEEEEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccc
Confidence 5799999999999999998643 24589999999999999999999997 8999999999999999999999999998
Q ss_pred cccc-------------------------------cccccceeeeeeehh
Q 005898 641 IVSE-------------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 641 ~~~~-------------------------------d~~s~g~~l~~~~~~ 659 (671)
+... |+||+||++|||+++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~ 415 (495)
T 1opk_A 366 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 415 (495)
T ss_dssp ECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred eeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhC
Confidence 6421 999999999999983
No 110
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.95 E-value=9.1e-29 Score=254.92 Aligned_cols=167 Identities=29% Similarity=0.400 Sum_probs=145.7
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CC-------cEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NG-------TSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g-------~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 554 (671)
++|+..+.||+|+||.||+|+.. ++ ..||+|.+........+.+.+|++++++++||||+++++++.+.+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 85 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD-- 85 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT--
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC--
Confidence 46788899999999999999854 34 479999997666666788999999999999999999999998753
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc---
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI--- 631 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~--- 631 (671)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 86 ------~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 154 (289)
T 4fvq_A 86 ------ENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKT 154 (289)
T ss_dssp ------CCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGG
T ss_pred ------CCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccc
Confidence 5699999999999999998642 3489999999999999999999997 7999999999999998887
Q ss_pred -----EEEcccCCccccc---------------------------cccccceeeeeeehhhhc
Q 005898 632 -----AKLSDYGLSIVSE---------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 632 -----~ki~DfGla~~~~---------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+||+|||+++... |+||+|+++|+|+++...
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~ 217 (289)
T 4fvq_A 155 GNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK 217 (289)
T ss_dssp TBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCC
Confidence 9999999985421 999999999999996443
No 111
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.95 E-value=6.5e-29 Score=263.91 Aligned_cols=169 Identities=23% Similarity=0.433 Sum_probs=144.3
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-----hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-----KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
+.|+..+.||+|+||+||+|+.. +|+.||||++.... ....+++.+|++++++++|||||++++++.+.+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---- 99 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG---- 99 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----
Confidence 46888999999999999999865 79999999985322 123578999999999999999999999998753
Q ss_pred cccceEEEEEecCCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc---E
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI---A 632 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~ 632 (671)
..++||||+++|+|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +
T Consensus 100 ----~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 100 ----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp ----EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred ----EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 7899999999999988876432 234589999999999999999999997 8999999999999986554 9
Q ss_pred EEcccCCccccc------------------------------cccccceeeeeeehhhhc
Q 005898 633 KLSDYGLSIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 633 ki~DfGla~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
||+|||+++... |+||+||++|+|+++...
T Consensus 173 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p 232 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232 (351)
T ss_dssp EECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred EEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCC
Confidence 999999985421 999999999999997544
No 112
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.1e-27 Score=249.26 Aligned_cols=226 Identities=20% Similarity=0.208 Sum_probs=189.7
Q ss_pred CEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCC--CCCcccCCCCCcCEEEcc
Q 005898 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNN--TIPNWFDSLPSLTFLSMR 198 (671)
Q Consensus 121 ~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~ 198 (671)
+.++.++++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 45777777774 4565443 689999999999975444557899999999999999873 336677788999999999
Q ss_pred cccCCCCCcccccCCCCCCEEEeccCccccccC--CCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchh
Q 005898 199 NNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP--DLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPK 276 (671)
Q Consensus 199 ~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~ 276 (671)
+|.++ .+|..+..+++|+.|++++|.+++..+ .+..+++|++|++++|.+++ ..|.
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------~~~~ 144 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV---------------------AFNG 144 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE---------------------CSTT
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc---------------------cchh
Confidence 99988 578888899999999999999987665 47788888888888776643 4566
Q ss_pred hhcCCcccceeecccccccC-CCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCC
Q 005898 277 QYGQLNQLQQLDMSFNALRG-MPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESD 355 (671)
Q Consensus 277 ~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~ 355 (671)
.+..+++|++|++++|.+++ ..|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|.+++..+..+..+++
T Consensus 145 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 224 (306)
T 2z66_A 145 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 224 (306)
T ss_dssp TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTT
T ss_pred hcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCccc
Confidence 78889999999999999998 67778999999999999999999998999999999999999999999877778888999
Q ss_pred CceeccCCCcCCCCcC
Q 005898 356 KRVVKFRGNCLSSNVQ 371 (671)
Q Consensus 356 l~~l~l~~N~l~~~~~ 371 (671)
++.+++++|.+++..+
T Consensus 225 L~~L~L~~N~l~~~~~ 240 (306)
T 2z66_A 225 LQVLDYSLNHIMTSKK 240 (306)
T ss_dssp CCEEECTTSCCCBCSS
T ss_pred CCEeECCCCCCcccCH
Confidence 9999999999986543
No 113
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.95 E-value=1.4e-28 Score=271.08 Aligned_cols=150 Identities=21% Similarity=0.410 Sum_probs=120.7
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|+..++||+|+||+||+|+.. +|+.||||++... .....+.+.+|+++|++++|||||++++++...+.. ..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---~~ 129 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVE---KF 129 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT---TC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcc---cC
Confidence 57899999999999999999865 7899999998653 234467899999999999999999999998654311 12
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
...|+||||+. |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 130 DELYVVLEIAD-SDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp CCEEEEECCCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccc-cchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccccc
Confidence 46899999985 69999987543 499999999999999999999997 899999999999999999999999999
Q ss_pred ccc
Q 005898 640 SIV 642 (671)
Q Consensus 640 a~~ 642 (671)
|+.
T Consensus 203 a~~ 205 (458)
T 3rp9_A 203 ART 205 (458)
T ss_dssp CBC
T ss_pred chh
Confidence 853
No 114
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.95 E-value=1.2e-28 Score=260.60 Aligned_cols=168 Identities=27% Similarity=0.487 Sum_probs=146.2
Q ss_pred HHhcCCCcCceeccCCceEEEEEEEc------CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCC
Q 005898 480 EATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGG 552 (671)
Q Consensus 480 ~~~~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 552 (671)
...++|+..+.||+|+||.||+|+.. +++.||||+++... ....+++.+|++++++++||||++++++|.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34578899999999999999999864 34789999997543 334678999999999999999999999997653
Q ss_pred CCCCcccceEEEEEecCCCCChhhhhhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHhcCCCC
Q 005898 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTP---------------------GKVLNWSERLAVLIGVAKAVQFLHTGVI 611 (671)
Q Consensus 553 ~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~ 611 (671)
..++||||+++|+|.+++..... ...+++.++..++.|+++||+|||+.
T Consensus 124 --------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-- 193 (343)
T 1luf_A 124 --------PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-- 193 (343)
T ss_dssp --------SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred --------ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 57999999999999999976321 14699999999999999999999997
Q ss_pred CCccccCCCCCceeecCCCcEEEcccCCcccc--------------------------------ccccccceeeeeeeh
Q 005898 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS--------------------------------EDINSVGVRLLILMS 658 (671)
Q Consensus 612 ~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~--------------------------------~d~~s~g~~l~~~~~ 658 (671)
+|+||||||+||++++++.+||+|||+++.. .|+||+|+++|+|++
T Consensus 194 -~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 271 (343)
T 1luf_A 194 -KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271 (343)
T ss_dssp -TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred -CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHh
Confidence 8999999999999999999999999988531 199999999999998
No 115
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.95 E-value=1.8e-28 Score=253.39 Aligned_cols=167 Identities=22% Similarity=0.312 Sum_probs=143.1
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 74 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK------- 74 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-------
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC-------
Confidence 46888899999999999999975 68999999996433 333577889999999999999999999998753
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++ ++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 75 -~~~lv~e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 75 -KLTLVFEFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp -EEEEEEECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred -EEEEEEecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 78999999986 6666555432 3499999999999999999999997 899999999999999999999999999
Q ss_pred ccccc-------------------------------cccccceeeeeeehhhhcc
Q 005898 640 SIVSE-------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 640 a~~~~-------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
++... |+||+||++|+|+++...+
T Consensus 148 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~ 202 (292)
T 3o0g_A 148 ARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202 (292)
T ss_dssp CEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCS
T ss_pred ceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCC
Confidence 85321 9999999999999876543
No 116
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.95 E-value=6.3e-29 Score=255.41 Aligned_cols=163 Identities=24% Similarity=0.428 Sum_probs=142.3
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccce
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 561 (671)
.++|+..+.||+|+||.||+|+..++..||||++..... ..+++.+|++++.+++||||+++++++.+.. .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~ 93 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--------P 93 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--------S
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC--------C
Confidence 457888899999999999999998888999999976533 3467999999999999999999999997653 6
Q ss_pred EEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCcc
Q 005898 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~ 641 (671)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 168 (283)
T 3gen_A 94 IFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR 168 (283)
T ss_dssp EEEEECCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGG
T ss_pred eEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccc
Confidence 899999999999999997632 2489999999999999999999997 89999999999999999999999999986
Q ss_pred ccc-------------------------------cccccceeeeeeeh
Q 005898 642 VSE-------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 642 ~~~-------------------------------d~~s~g~~l~~~~~ 658 (671)
... |+||+|+++|+|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t 216 (283)
T 3gen_A 169 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216 (283)
T ss_dssp GBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence 321 99999999999998
No 117
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.95 E-value=2.1e-28 Score=267.66 Aligned_cols=168 Identities=22% Similarity=0.369 Sum_probs=145.1
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
..++|+..+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG----- 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS-----
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC-----
Confidence 3467889999999999999999864 79999999997543 334567899999999999999999999998653
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec---CCCcEEE
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN---EHRIAKL 634 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~---~~~~~ki 634 (671)
..++||||+++|+|.+++.... .+++.+...++.|++.||+|||+. +|+||||||+||+++ +++.+||
T Consensus 84 ---~~~lv~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL 154 (444)
T 3soa_A 84 ---HHYLIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKL 154 (444)
T ss_dssp ---EEEEEECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEE
T ss_pred ---EEEEEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEE
Confidence 7899999999999999988653 389999999999999999999997 899999999999998 4688999
Q ss_pred cccCCccccc------------------------------cccccceeeeeeehhhhc
Q 005898 635 SDYGLSIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 635 ~DfGla~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+|||+++... |+||+||++|+|++|...
T Consensus 155 ~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~P 212 (444)
T 3soa_A 155 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212 (444)
T ss_dssp CCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCC
Confidence 9999985321 999999999999998654
No 118
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.95 E-value=4.5e-29 Score=273.95 Aligned_cols=167 Identities=22% Similarity=0.344 Sum_probs=137.6
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC---chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
.++|+..++||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++||||++++++|.+.+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----- 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----- 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT-----
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC-----
Confidence 457889999999999999999964 7999999998643 2233466889999999999999999999998754
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcC-CCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHT-GVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++|||||++|+|..++.... .+++..+..++.|+++||+|||+ . +|+||||||+|||++.++.+||+|
T Consensus 222 ---~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~D 292 (446)
T 4ejn_A 222 ---RLCFVMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITD 292 (446)
T ss_dssp ---EEEEEECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECC
T ss_pred ---EEEEEEeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEcc
Confidence 6899999999999999997643 48999999999999999999997 5 799999999999999999999999
Q ss_pred cCCccccc------------------------------cccccceeeeeeehhhhc
Q 005898 637 YGLSIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
||+++... |+||+||++|+|++|...
T Consensus 293 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P 348 (446)
T 4ejn_A 293 FGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348 (446)
T ss_dssp CCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCC
Confidence 99986421 999999999999996543
No 119
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.95 E-value=2e-28 Score=256.42 Aligned_cols=169 Identities=24% Similarity=0.350 Sum_probs=132.0
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------- 76 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN------- 76 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT-------
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC-------
Confidence 357888999999999999999864 68999999996543 223467889999999999999999999997653
Q ss_pred ceEEEEEecCCCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 560 NKVFLVYEFMSNGNFRTHISENT---PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++||||++ |+|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 77 -~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 151 (317)
T 2pmi_A 77 -KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGD 151 (317)
T ss_dssp -EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred -eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECc
Confidence 7899999998 59999886431 224589999999999999999999987 899999999999999999999999
Q ss_pred cCCccccc-------------------------------cccccceeeeeeehhhhc
Q 005898 637 YGLSIVSE-------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~~-------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
||+++... |+||+||++|+|++|...
T Consensus 152 fg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p 208 (317)
T 2pmi_A 152 FGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPL 208 (317)
T ss_dssp CSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 99985321 999999999999998643
No 120
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.95 E-value=9.8e-29 Score=260.59 Aligned_cols=165 Identities=22% Similarity=0.376 Sum_probs=144.0
Q ss_pred cCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------ 82 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT------ 82 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC------
Confidence 5788899999999999999996 578999999986432 112357899999999999999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+ +|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 83 --~~~lv~E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG 153 (336)
T 3h4j_B 83 --DIVMVIEYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFG 153 (336)
T ss_dssp --EEEEEECCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSS
T ss_pred --EEEEEEECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEec
Confidence 689999999 789999887643 389999999999999999999997 79999999999999999999999999
Q ss_pred Cccccc------------------------------cccccceeeeeeehhhhc
Q 005898 639 LSIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+++... |+||+||++|+|++|...
T Consensus 154 ~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~P 207 (336)
T 3h4j_B 154 LSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207 (336)
T ss_dssp CTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCC
Confidence 985321 999999999999997654
No 121
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.95 E-value=1.3e-28 Score=275.12 Aligned_cols=169 Identities=20% Similarity=0.272 Sum_probs=147.8
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
.++|+..++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD----- 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC-----
Confidence 456888999999999999999975 79999999996432 223567889999999999999999999988653
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 258 ---~l~lVmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 258 ---ALCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp ---EEEEEECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred ---EEEEEEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEec
Confidence 7899999999999999987543 23489999999999999999999997 8999999999999999999999999
Q ss_pred CCccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 638 GLSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 638 Gla~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
|+++... |+||+||++|||++|...
T Consensus 331 Gla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~P 384 (576)
T 2acx_A 331 GLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384 (576)
T ss_dssp TTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCS
T ss_pred ccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCC
Confidence 9996431 999999999999997654
No 122
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.95 E-value=1.4e-28 Score=261.13 Aligned_cols=166 Identities=23% Similarity=0.401 Sum_probs=136.4
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
..+.|+..+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||++++++|.+.+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 121 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT------- 121 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS-------
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC-------
Confidence 3567889999999999999999976 68899999997543 3467889999999999999999999998653
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC---CCcEEEcc
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAKLSD 636 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~ki~D 636 (671)
..++||||+++|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 122 -~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~D 194 (349)
T 2w4o_A 122 -EISLVLELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIAD 194 (349)
T ss_dssp -EEEEEECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred -eEEEEEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEcc
Confidence 6899999999999999987543 489999999999999999999997 7999999999999975 89999999
Q ss_pred cCCccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 637 YGLSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
||+++... |+||+||++|+|+++...
T Consensus 195 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 249 (349)
T 2w4o_A 195 FGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249 (349)
T ss_dssp CC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCC
Confidence 99986421 999999999999998654
No 123
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.95 E-value=1.1e-28 Score=254.43 Aligned_cols=166 Identities=20% Similarity=0.334 Sum_probs=144.1
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCch--hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
++|+..+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 73 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-------- 73 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--------
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--------
Confidence 46788899999999999999988899999999865432 22467889999999999999999999998653
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla 640 (671)
..++||||+++ +|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (288)
T 1ob3_A 74 RLVLVFEHLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLA 147 (288)
T ss_dssp CEEEEEECCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred eEEEEEEecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccc
Confidence 68999999985 9998887542 3489999999999999999999997 8999999999999999999999999987
Q ss_pred cccc-------------------------------cccccceeeeeeehhhhc
Q 005898 641 IVSE-------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 641 ~~~~-------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+... |+||+||++|+|+++...
T Consensus 148 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p 200 (288)
T 1ob3_A 148 RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200 (288)
T ss_dssp HHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 4310 999999999999997643
No 124
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.95 E-value=1.7e-28 Score=261.68 Aligned_cols=166 Identities=20% Similarity=0.317 Sum_probs=144.2
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++++++|||||++++++.+.+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-------- 89 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPT-------- 89 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS--------
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--------
Confidence 357888999999999999999975 799999999975433 2367889999999999999999999998753
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc--EEEcccC
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI--AKLSDYG 638 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~--~ki~DfG 638 (671)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 90 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 90 HLAIIMEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred EEEEEEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 6899999999999999987643 389999999999999999999987 7999999999999987765 9999999
Q ss_pred Ccccc------------------------------ccccccceeeeeeehhhhc
Q 005898 639 LSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+++.. .|+||+||++|+|++|...
T Consensus 164 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~P 217 (361)
T 3uc3_A 164 YSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217 (361)
T ss_dssp CC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCC
Confidence 98621 2999999999999997654
No 125
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.95 E-value=7.8e-29 Score=264.93 Aligned_cols=166 Identities=23% Similarity=0.436 Sum_probs=142.3
Q ss_pred hcCCCcCceeccCCceEEEEEEEc------CCcEEEEEEccCC-chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 554 (671)
.++|+..+.||+|+||+||+|++. +++.||||++... ......++.+|+.++++++|||||++++++.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-- 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--
Confidence 356888899999999999999843 4678999999754 3445567999999999999999999999997653
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENT----PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~ 630 (671)
..++||||+++|+|.+++.... ....+++.++..++.||++||+|||+. +|+||||||+|||++.++
T Consensus 148 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 148 ------PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp ------SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred ------CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCC
Confidence 5699999999999999997632 224589999999999999999999997 899999999999999554
Q ss_pred ---cEEEcccCCcccc--------------------------------ccccccceeeeeeeh
Q 005898 631 ---IAKLSDYGLSIVS--------------------------------EDINSVGVRLLILMS 658 (671)
Q Consensus 631 ---~~ki~DfGla~~~--------------------------------~d~~s~g~~l~~~~~ 658 (671)
.+||+|||+++.. .|+||+||++|||++
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt 281 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHh
Confidence 5999999998521 199999999999998
No 126
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.95 E-value=8.8e-29 Score=264.66 Aligned_cols=167 Identities=22% Similarity=0.357 Sum_probs=136.7
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHH-HhcCCCCCcccccceeecCCCCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDL-LAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
.++|+..++||+|+||.||+|+.. +++.||||++.... ....+.+.+|..+ ++.++|||||++++++.+.+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~---- 112 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD---- 112 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC----
Confidence 357889999999999999999975 68899999996543 2234556777776 57789999999999998753
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..|+||||+++|+|.+++.... .+++.....++.+|+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 113 ----~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 113 ----KLYFVLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp ----EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred ----EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEee
Confidence 7899999999999999997643 388999999999999999999987 799999999999999999999999
Q ss_pred cCCcccc------------------------------ccccccceeeeeeehhhhc
Q 005898 637 YGLSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
||+++.. .|+||+||++|||++|...
T Consensus 183 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~P 238 (373)
T 2r5t_A 183 FGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238 (373)
T ss_dssp CCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCC
Confidence 9998641 1999999999999987543
No 127
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.95 E-value=2.1e-28 Score=253.66 Aligned_cols=166 Identities=19% Similarity=0.411 Sum_probs=138.0
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhc--CCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAK--LRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++|+..+.||+|+||.||+|+. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++.+... ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~----~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRH----SS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET----TE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC----CC
Confidence 35788899999999999999987 6899999998643 23455666666655 899999999998765321 12
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC-----CCCccccCCCCCceeecCCCcEEE
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV-----IPGFFNNRVKTNNILLNEHRIAKL 634 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-----~~~iiHrDlk~~NiLl~~~~~~ki 634 (671)
...++||||+++|+|.++++.. .+++..+.+++.|++.||+|||... ..+|+||||||+||+++.++.+||
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred ceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEE
Confidence 3689999999999999999643 4999999999999999999999311 238999999999999999999999
Q ss_pred cccCCccc----------------------------------------cccccccceeeeeeehh
Q 005898 635 SDYGLSIV----------------------------------------SEDINSVGVRLLILMSF 659 (671)
Q Consensus 635 ~DfGla~~----------------------------------------~~d~~s~g~~l~~~~~~ 659 (671)
+|||+++. ..|+||+||++|+|+++
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg 219 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence 99998732 12999999999999998
No 128
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.95 E-value=7e-29 Score=258.98 Aligned_cols=171 Identities=19% Similarity=0.310 Sum_probs=145.3
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
.+.|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---- 86 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP---- 86 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET----
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC----
Confidence 35688899999999999999996 578999999997542 2335678999999999999999999999876421
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
.....++||||+++|+|.++++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCC
T ss_pred CCcccEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeec
Confidence 1124599999999999999997643 489999999999999999999997 7999999999999999999999999
Q ss_pred CCcccc---------------------------------ccccccceeeeeeehhhhc
Q 005898 638 GLSIVS---------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 638 Gla~~~---------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|+++.. .|+||+|+++|+|+++...
T Consensus 161 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~p 218 (311)
T 3ork_A 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218 (311)
T ss_dssp SCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence 998532 1999999999999997543
No 129
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.95 E-value=1.6e-28 Score=250.31 Aligned_cols=163 Identities=22% Similarity=0.408 Sum_probs=144.7
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccce
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 561 (671)
.++|+..+.||+|+||.||+|+..++..||||++..... ..+++.+|++++.+++||||+++++++.+.. .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~ 77 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--------P 77 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--------S
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--------c
Confidence 356888899999999999999998888999999975432 3467999999999999999999999997643 6
Q ss_pred EEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCcc
Q 005898 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~ 641 (671)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 152 (268)
T 3sxs_A 78 IYIVTEYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTR 152 (268)
T ss_dssp EEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEE
T ss_pred eEEEEEccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccce
Confidence 899999999999999997642 2489999999999999999999997 89999999999999999999999999985
Q ss_pred cc-------------------------------ccccccceeeeeeeh
Q 005898 642 VS-------------------------------EDINSVGVRLLILMS 658 (671)
Q Consensus 642 ~~-------------------------------~d~~s~g~~l~~~~~ 658 (671)
.. .|+||+|+++|+|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 200 (268)
T 3sxs_A 153 YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200 (268)
T ss_dssp ECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHT
T ss_pred ecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHc
Confidence 32 199999999999998
No 130
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.5e-28 Score=256.53 Aligned_cols=166 Identities=25% Similarity=0.318 Sum_probs=140.4
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..++||+|+||+||+|+.. +|+.||||++.... .....++.+|+..+.++ +|||||+++++|.+.+
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~------ 130 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG------ 130 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC------
Confidence 46889999999999999999976 79999999986432 23344555666665555 8999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+ +|+|.+++.... ..++|..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||
T Consensus 131 --~~~lv~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 131 --ILYLQTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp --EEEEEEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCT
T ss_pred --EEEEEEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccce
Confidence 789999999 679999887643 3499999999999999999999987 79999999999999999999999999
Q ss_pred Cccccc----------------------------cccccceeeeeeehhhhc
Q 005898 639 LSIVSE----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~~----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+++... |+||+||++|||+++...
T Consensus 203 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~ 254 (311)
T 3p1a_A 203 LLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMEL 254 (311)
T ss_dssp TCEECC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCC
T ss_pred eeeecccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 985431 999999999999998543
No 131
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.95 E-value=1.9e-28 Score=269.77 Aligned_cols=166 Identities=28% Similarity=0.455 Sum_probs=146.4
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch---hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+++++.++||||+++++++.+.+
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~------ 89 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS------ 89 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC------
Confidence 56888999999999999999975 799999999964321 23567899999999999999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 90 --~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG 161 (476)
T 2y94_A 90 --DIFMVMEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFG 161 (476)
T ss_dssp --EEEEEEECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCS
T ss_pred --EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEecc
Confidence 6899999999999999997543 489999999999999999999997 89999999999999999999999999
Q ss_pred Cccccc------------------------------cccccceeeeeeehhhhc
Q 005898 639 LSIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+++... |+||+||++|+|++|...
T Consensus 162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~P 215 (476)
T 2y94_A 162 LSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLP 215 (476)
T ss_dssp SCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred chhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCC
Confidence 986421 999999999999997543
No 132
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.95 E-value=1.8e-28 Score=255.52 Aligned_cols=167 Identities=22% Similarity=0.395 Sum_probs=141.6
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccceE
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 562 (671)
++|+..+.||+|+||.||+|+.. ++.||||++.... ..+.|.+|++++++++||||+++++++.+ ..
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------~~ 74 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLN----------PV 74 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCTT----------TT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEcC----------Cc
Confidence 45778899999999999999875 7889999996432 45789999999999999999999998863 35
Q ss_pred EEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc-EEEcccCCcc
Q 005898 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI-AKLSDYGLSI 641 (671)
Q Consensus 563 ~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~-~ki~DfGla~ 641 (671)
++||||+++|+|.+++........+++..+..++.|+++||+|||+....+|+||||||+||++++++. +||+|||+++
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~ 154 (307)
T 2eva_A 75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC 154 (307)
T ss_dssp EEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--
T ss_pred EEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccc
Confidence 899999999999999986544345789999999999999999999954337999999999999998876 7999999985
Q ss_pred cc---------------------------ccccccceeeeeeehhhhc
Q 005898 642 VS---------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 642 ~~---------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
.. .|+||+|+++|+|+++...
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 202 (307)
T 2eva_A 155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 202 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCT
T ss_pred ccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 32 1999999999999997543
No 133
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.95 E-value=9.7e-29 Score=271.64 Aligned_cols=165 Identities=24% Similarity=0.470 Sum_probs=144.4
Q ss_pred HhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
..++|+..+.||+|+||.||+|+..++..||||+++... ...++|.+|+++|++++|||||++++++.+.
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--------- 251 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--------- 251 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---------
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcCC---------
Confidence 456688889999999999999999888889999997643 2357899999999999999999999998652
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla 640 (671)
..++|||||++|+|.+++.... ...+++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 252 ~~~iv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 327 (452)
T 1fmk_A 252 PIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 327 (452)
T ss_dssp SCEEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred ceEEEehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccc
Confidence 4799999999999999997421 23489999999999999999999997 7999999999999999999999999998
Q ss_pred cccc-------------------------------cccccceeeeeeehh
Q 005898 641 IVSE-------------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 641 ~~~~-------------------------------d~~s~g~~l~~~~~~ 659 (671)
+... |+||+|+++|||+++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~ 377 (452)
T 1fmk_A 328 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 377 (452)
T ss_dssp C--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred eecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhC
Confidence 6421 999999999999994
No 134
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.95 E-value=2.1e-28 Score=256.54 Aligned_cols=174 Identities=18% Similarity=0.385 Sum_probs=136.1
Q ss_pred HhcCCCcCceeccCCceEEEEEEEcC-Cc---EEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLEN-GT---SVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~~-g~---~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 554 (671)
..++|+..+.||+|+||.||+|+... +. .||||++... .....+++.+|++++++++||||+++++++.+....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45678899999999999999998653 32 7999999754 234567899999999999999999999999865311
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENT---PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI 631 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 631 (671)
......++||||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 101 --~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 101 --GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred --cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 01123489999999999999986432 123589999999999999999999997 7999999999999999999
Q ss_pred EEEcccCCccccc--------------------------------cccccceeeeeeehh
Q 005898 632 AKLSDYGLSIVSE--------------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 632 ~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~~ 659 (671)
+||+|||+++... |+||+||++|+|+++
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~ 235 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhC
Confidence 9999999985421 999999999999994
No 135
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.95 E-value=2.5e-28 Score=254.65 Aligned_cols=166 Identities=27% Similarity=0.505 Sum_probs=144.3
Q ss_pred hcCCCcCceeccCCceEEEEEEE------cCCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 554 (671)
.++|...+.||+|+||.||+|+. .+++.||||++.... ....+++.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-- 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--
Confidence 45788889999999999999985 245789999997543 345678999999999999999999999987653
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCC
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTP---------------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPG 613 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ 613 (671)
..++||||+++|+|.+++..... ...+++.++..++.|+++||+|||+. +
T Consensus 100 ------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ 170 (314)
T 2ivs_A 100 ------PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---K 170 (314)
T ss_dssp ------SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ------ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---C
Confidence 57999999999999999976432 23489999999999999999999997 7
Q ss_pred ccccCCCCCceeecCCCcEEEcccCCcccc--------------------------------ccccccceeeeeeeh
Q 005898 614 FFNNRVKTNNILLNEHRIAKLSDYGLSIVS--------------------------------EDINSVGVRLLILMS 658 (671)
Q Consensus 614 iiHrDlk~~NiLl~~~~~~ki~DfGla~~~--------------------------------~d~~s~g~~l~~~~~ 658 (671)
|+||||||+||++++++.+||+|||+++.. .|+||+|+++|+|++
T Consensus 171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 247 (314)
T 2ivs_A 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247 (314)
T ss_dssp EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999998532 199999999999998
No 136
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.95 E-value=3.2e-28 Score=261.70 Aligned_cols=166 Identities=23% Similarity=0.487 Sum_probs=144.4
Q ss_pred hcCCCcCceeccCCceEEEEEEEc--------CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCCCcccccceeecC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE--------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDG 551 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 551 (671)
.++|...+.||+|+||.||+|+.. ++..||||++.... ....+++.+|+++++++ +|||||+++++|.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467888999999999999999852 23579999997543 34467899999999999 899999999999765
Q ss_pred CCCCCcccceEEEEEecCCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccC
Q 005898 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (671)
Q Consensus 552 ~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrD 618 (671)
+ ..++||||+++|+|.+++..... ...+++.++..++.|+++||+|||+. +|+|||
T Consensus 148 ~--------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 216 (382)
T 3tt0_A 148 G--------PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 216 (382)
T ss_dssp S--------SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred C--------ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence 3 57999999999999999976432 24599999999999999999999997 899999
Q ss_pred CCCCceeecCCCcEEEcccCCccccc--------------------------------cccccceeeeeeeh
Q 005898 619 VKTNNILLNEHRIAKLSDYGLSIVSE--------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 619 lk~~NiLl~~~~~~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~ 658 (671)
|||+||++++++.+||+|||+++... |+||+||++|+|++
T Consensus 217 lkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt 288 (382)
T 3tt0_A 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288 (382)
T ss_dssp CCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHh
Confidence 99999999999999999999986321 99999999999998
No 137
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.95 E-value=3.9e-28 Score=250.31 Aligned_cols=164 Identities=12% Similarity=0.117 Sum_probs=143.2
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
+.|+..+.||+|+||.||+|+.. +|+.||||++.... ....+++.+|++.+.+++||||+++++++.+.+
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~------ 104 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA------ 104 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT------
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC------
Confidence 56888999999999999999975 58999999997543 234578999999999999999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..|+||||+++|+|.+++... ....+..+++.|++.||+|||+. +|+||||||+||++++++.+||+++|
T Consensus 105 --~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 105 --GGLVVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp --EEEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred --cEEEEEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc
Confidence 689999999999999998532 35567889999999999999997 89999999999999999999999998
Q ss_pred Cccccc---cccccceeeeeeehhhhc
Q 005898 639 LSIVSE---DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~~---d~~s~g~~l~~~~~~~~~ 662 (671)
.....+ |+||+||++|+|++|...
T Consensus 175 ~~~~~~~~~Di~slG~il~elltg~~P 201 (286)
T 3uqc_A 175 TMPDANPQDDIRGIGASLYALLVNRWP 201 (286)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHSEEC
T ss_pred ccCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 765543 999999999999997654
No 138
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.1e-26 Score=255.47 Aligned_cols=245 Identities=19% Similarity=0.185 Sum_probs=216.6
Q ss_pred CEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccc
Q 005898 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN 200 (671)
Q Consensus 121 ~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 200 (671)
+.++.+++++. .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 34556666664 4666554 68999999999999988999999999999999999999988899999999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEeccCccccccC-CCCCCCCCCEEECCCCCCCCCCCC----CCCCccEEEcCCCCCCCCch
Q 005898 201 KLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPK----LPRGLVMAFLSNNSFSGEIP 275 (671)
Q Consensus 201 ~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~L~~l~l~~N~l~~~~p 275 (671)
++++..+..|..+++|++|+|++|.++...+ .+..+++|+.|++++|+..+.++. -..+|+.|++++|++++ +|
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc
Confidence 9997777779999999999999999997666 388999999999999655554443 24689999999999986 44
Q ss_pred hhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCC
Q 005898 276 KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESD 355 (671)
Q Consensus 276 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~ 355 (671)
.+..+++|+.|+|++|++++.+|..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+++
T Consensus 213 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 291 (452)
T 3zyi_A 213 -NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 291 (452)
T ss_dssp -CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTT
T ss_pred -cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccC
Confidence 5889999999999999999999999999999999999999999999999999999999999999999877788888999
Q ss_pred CceeccCCCcCCCCc
Q 005898 356 KRVVKFRGNCLSSNV 370 (671)
Q Consensus 356 l~~l~l~~N~l~~~~ 370 (671)
++.+++++|.+.+++
T Consensus 292 L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 292 LVELHLHHNPWNCDC 306 (452)
T ss_dssp CCEEECCSSCEECST
T ss_pred CCEEEccCCCcCCCC
Confidence 999999999887654
No 139
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=2.1e-28 Score=261.96 Aligned_cols=168 Identities=25% Similarity=0.434 Sum_probs=138.8
Q ss_pred CCCcCceeccCCceEEEEEEEc--CC--cEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 484 NFDMSAIMGEGSYGKLYKGRLE--NG--TSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 484 ~f~~~~~iG~G~~g~Vy~~~~~--~g--~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.|+..++||+|+||.||+|+.. ++ ..||||.+.... ....++|.+|+.++++++|||||+++++|.+.+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~------ 163 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE------ 163 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS------
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Confidence 3566789999999999999863 22 468999986533 345678999999999999999999999986543
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
...++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 164 -~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG 237 (373)
T 3c1x_A 164 -GSPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFG 237 (373)
T ss_dssp -SCCEEEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred -CCeEEEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecc
Confidence 25689999999999999997543 3488999999999999999999997 89999999999999999999999999
Q ss_pred Ccccc----------------------------------ccccccceeeeeeehhhhcc
Q 005898 639 LSIVS----------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 639 la~~~----------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
+++.. .|+||+||++|+|+++...+
T Consensus 238 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p 296 (373)
T 3c1x_A 238 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 296 (373)
T ss_dssp --------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCC
Confidence 98632 19999999999999954433
No 140
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.95 E-value=1.5e-28 Score=258.51 Aligned_cols=162 Identities=25% Similarity=0.449 Sum_probs=136.8
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcE----EEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTS----VAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~----vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
++|+..+.||+|+||.||+|+.. +++. ||+|.+.... ....+++.+|++++++++|||||+++++|.+.
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 89 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 89 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-----
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----
Confidence 46888899999999999999854 4543 5888886432 34467899999999999999999999999864
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++|+||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|
T Consensus 90 ----~~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~D 160 (327)
T 3poz_A 90 ----TVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp ----SEEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECC
T ss_pred ----CeEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEcc
Confidence 4689999999999999998643 3489999999999999999999997 899999999999999999999999
Q ss_pred cCCccccc--------------------------------cccccceeeeeeeh
Q 005898 637 YGLSIVSE--------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 637 fGla~~~~--------------------------------d~~s~g~~l~~~~~ 658 (671)
||+++... |+||+||++|+|++
T Consensus 161 fg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt 214 (327)
T 3poz_A 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214 (327)
T ss_dssp TTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHh
Confidence 99985321 99999999999999
No 141
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.95 E-value=3.3e-28 Score=249.22 Aligned_cols=167 Identities=22% Similarity=0.354 Sum_probs=147.1
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.+.|+..+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++.+.+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------- 79 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT-------- 79 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--------
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--------
Confidence 346888999999999999999975 57899999997655555678999999999999999999999998653
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee---cCCCcEEEccc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLSDY 637 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~ki~Df 637 (671)
..++||||+++|+|.+++.... .+++.++..++.+++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Df 153 (277)
T 3f3z_A 80 DIYLVMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDF 153 (277)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEec
Confidence 6899999999999999887643 389999999999999999999987 79999999999999 78899999999
Q ss_pred CCcccc----------------------------ccccccceeeeeeehhhhc
Q 005898 638 GLSIVS----------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 638 Gla~~~----------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|++... .|+||+|+++|+|+++...
T Consensus 154 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p 206 (277)
T 3f3z_A 154 GLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPP 206 (277)
T ss_dssp TTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred ccceeccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCC
Confidence 998542 2999999999999997543
No 142
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.95 E-value=2.9e-28 Score=271.58 Aligned_cols=170 Identities=19% Similarity=0.306 Sum_probs=147.9
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~------ 258 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT------ 258 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC------
Confidence 56888899999999999999975 79999999996432 223567899999999999999999999987653
Q ss_pred cceEEEEEecCCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++|+|..++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 259 --~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 259 --DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp --EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred --EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeec
Confidence 7899999999999999987643 234599999999999999999999997 8999999999999999999999999
Q ss_pred CCccccc------------------------------cccccceeeeeeehhhhcc
Q 005898 638 GLSIVSE------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 638 Gla~~~~------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
|+++... |+||+||++|||++|....
T Consensus 334 Gla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF 389 (543)
T 3c4z_A 334 GLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389 (543)
T ss_dssp TTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCC
Confidence 9985421 9999999999999976543
No 143
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.95 E-value=4.1e-28 Score=267.22 Aligned_cols=171 Identities=21% Similarity=0.275 Sum_probs=142.6
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.++|+..+.||+|+||+||+|+.. +|+.||||++... .....+++.+|+.+|+.++|||||++++++...... ..
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~--~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL--EE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST--TT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcc--cc
Confidence 467888999999999999999864 6899999999754 234467789999999999999999999999764311 11
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
....|+|||||++ ++.+.+.. .+++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 2468999999986 46666643 288999999999999999999997 79999999999999999999999999
Q ss_pred Cccccc-----------------------------cccccceeeeeeehhhhcc
Q 005898 639 LSIVSE-----------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 639 la~~~~-----------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
+|+... |+||+||++|+|++|....
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF 263 (464)
T 3ttj_A 210 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263 (464)
T ss_dssp CC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred eeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCC
Confidence 986422 9999999999999876543
No 144
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.95 E-value=3.3e-28 Score=258.12 Aligned_cols=166 Identities=28% Similarity=0.394 Sum_probs=143.8
Q ss_pred cCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
+.|+..+.||+|+||.||+|+. .+|+.||||++.... ....+++.+|++++++++|||||+++++|.+.+
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 127 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH------ 127 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC------
Confidence 4588889999999999999996 579999999996432 233567899999999999999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||++ |++.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 128 --~~~lv~e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 128 --TAWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp --EEEEEEECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred --eEEEEEecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeecc
Confidence 7899999997 68888775432 3489999999999999999999997 79999999999999999999999999
Q ss_pred Ccccc-----------------------------ccccccceeeeeeehhhhc
Q 005898 639 LSIVS-----------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~-----------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+++.. .|+||+||++|+|+++...
T Consensus 200 ~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p 252 (348)
T 1u5q_A 200 SASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252 (348)
T ss_dssp TCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CceecCCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 98532 1999999999999997654
No 145
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=2.4e-28 Score=263.91 Aligned_cols=172 Identities=24% Similarity=0.338 Sum_probs=148.1
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
+.|+..++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+. .
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~------~ 82 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT------R 82 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT------C
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCC------C
Confidence 46788899999999999999975 58999999997543 2345678899999999999999999999886532 2
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee----cCCCcEEEcc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL----NEHRIAKLSD 636 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl----~~~~~~ki~D 636 (671)
..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (396)
T 4eut_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (396)
T ss_dssp CEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECC
T ss_pred eeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEec
Confidence 5799999999999999998654444599999999999999999999997 89999999999999 7788899999
Q ss_pred cCCcccc-------------------------------------ccccccceeeeeeehhhhcc
Q 005898 637 YGLSIVS-------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 637 fGla~~~-------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
||+++.. .|+||+||++|+|++|....
T Consensus 160 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf 223 (396)
T 4eut_A 160 FGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223 (396)
T ss_dssp GGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSE
T ss_pred CCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 9998542 19999999999999976543
No 146
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.95 E-value=3.2e-28 Score=255.83 Aligned_cols=168 Identities=23% Similarity=0.381 Sum_probs=147.8
Q ss_pred cCCCcCceeccCCceEEEEEEE-----cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-----ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~---- 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR---- 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS----
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC----
Confidence 5688899999999999999984 3688999999987766667789999999999999999999999875431
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
...++||||+++|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 99 --~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 99 --QSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp --CEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCG
T ss_pred --ceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccc
Confidence 36899999999999999997532 2489999999999999999999987 8999999999999999999999999
Q ss_pred CCccccc---------------------------------cccccceeeeeeehhhh
Q 005898 638 GLSIVSE---------------------------------DINSVGVRLLILMSFFF 661 (671)
Q Consensus 638 Gla~~~~---------------------------------d~~s~g~~l~~~~~~~~ 661 (671)
|+++... |+||+|+++|+|+++..
T Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~ 228 (327)
T 3lxl_A 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD 228 (327)
T ss_dssp GGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred ccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCC
Confidence 9986321 99999999999999744
No 147
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=5.3e-27 Score=252.79 Aligned_cols=247 Identities=19% Similarity=0.192 Sum_probs=201.9
Q ss_pred CCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEE
Q 005898 116 RLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFL 195 (671)
Q Consensus 116 ~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (671)
.+.+|++|++++|.+....+..+.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46789999999999876555568999999999999999998888899999999999999999999888999999999999
Q ss_pred EcccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCC---------------
Q 005898 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRG--------------- 259 (671)
Q Consensus 196 ~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------------- 259 (671)
++++|+++...+..+.++++|++|++++|.+++..|. +..+++|++|++++|++++........
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~ 202 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 202 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccC
Confidence 9999999954444579999999999999999988775 889999999999999998653332333
Q ss_pred ----ccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEE
Q 005898 260 ----LVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFF 335 (671)
Q Consensus 260 ----L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l 335 (671)
++.+++++|.++.. |.. ..++|+.|++++|.+++. +.+..+++|+.|+|++|.+++..|..+..+++|+.|
T Consensus 203 ~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (390)
T 3o6n_A 203 IPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERL 277 (390)
T ss_dssp CCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred CCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEE
Confidence 45555555555432 222 245788888888888775 367788888888888888888888888888888888
Q ss_pred ECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 336 DISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 336 ~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
++++|++++ +|.....+++++.+++++|.++.
T Consensus 278 ~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~ 309 (390)
T 3o6n_A 278 YISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH 309 (390)
T ss_dssp ECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC
T ss_pred ECCCCcCcc-cCcccCCCCCCCEEECCCCccee
Confidence 888888875 56666777888888888887763
No 148
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.95 E-value=3.4e-28 Score=249.80 Aligned_cols=163 Identities=20% Similarity=0.401 Sum_probs=136.8
Q ss_pred hcCCCcCceeccCCceEEEEEEEc----CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
.++|+..+.||+|+||.||+|+.. .+..||||.+.... ....+.+.+|+.++++++||||+++++++.+.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 88 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN----- 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccC-----
Confidence 356888999999999999999864 24579999987543 34467799999999999999999999998542
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|
T Consensus 89 ----~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 159 (281)
T 1mp8_A 89 ----PVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD 159 (281)
T ss_dssp ----SCEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred ----ccEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECc
Confidence 4689999999999999997643 3489999999999999999999997 899999999999999999999999
Q ss_pred cCCcccc-------------------------------ccccccceeeeeeeh
Q 005898 637 YGLSIVS-------------------------------EDINSVGVRLLILMS 658 (671)
Q Consensus 637 fGla~~~-------------------------------~d~~s~g~~l~~~~~ 658 (671)
||+++.. .|+||+|+++|+|++
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~ 212 (281)
T 1mp8_A 160 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212 (281)
T ss_dssp -------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHT
T ss_pred cccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHh
Confidence 9988532 199999999999997
No 149
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.95 E-value=3.5e-28 Score=252.23 Aligned_cols=168 Identities=26% Similarity=0.508 Sum_probs=142.6
Q ss_pred cCCCcCceeccCCceEEEEEEE-----cCCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-----ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
+.|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--- 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG--- 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC---
Confidence 3477889999999999999984 368899999997443 3345789999999999999999999999986532
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
...++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 98 ---~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 169 (302)
T 4e5w_A 98 ---NGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 169 (302)
T ss_dssp ---CCEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ---ceEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECc
Confidence 25799999999999999996532 3489999999999999999999997 899999999999999999999999
Q ss_pred cCCccccc---------------------------------cccccceeeeeeehhhh
Q 005898 637 YGLSIVSE---------------------------------DINSVGVRLLILMSFFF 661 (671)
Q Consensus 637 fGla~~~~---------------------------------d~~s~g~~l~~~~~~~~ 661 (671)
||+++... |+||+|+++|+|+++..
T Consensus 170 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 227 (302)
T 4e5w_A 170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD 227 (302)
T ss_dssp CTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred ccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccC
Confidence 99985321 99999999999999644
No 150
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.95 E-value=1.4e-28 Score=275.83 Aligned_cols=165 Identities=24% Similarity=0.470 Sum_probs=145.4
Q ss_pred HhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
..++|+..+.||+|+||.||+|++.++..||||+++... ...++|.+|+++|++++|||||+++++|.+.
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--------- 334 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--------- 334 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---------
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEeec---------
Confidence 345688889999999999999999888889999997643 2357899999999999999999999998652
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla 640 (671)
..++|||||++|+|.++++... ...+++.++..++.||++||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 335 ~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 410 (535)
T 2h8h_A 335 PIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 410 (535)
T ss_dssp SCEEEECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTST
T ss_pred cceEeeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccc
Confidence 4799999999999999997431 23489999999999999999999997 7999999999999999999999999999
Q ss_pred cccc-------------------------------cccccceeeeeeehh
Q 005898 641 IVSE-------------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 641 ~~~~-------------------------------d~~s~g~~l~~~~~~ 659 (671)
+... |+||+||++|||+++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~ 460 (535)
T 2h8h_A 411 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 460 (535)
T ss_dssp TTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred eecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhC
Confidence 6431 999999999999994
No 151
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.95 E-value=5.1e-28 Score=260.71 Aligned_cols=170 Identities=22% Similarity=0.314 Sum_probs=147.4
Q ss_pred hcCCCcCceeccC--CceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 482 TNNFDMSAIMGEG--SYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 482 ~~~f~~~~~iG~G--~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
.++|+..+.||+| +||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 99 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN---- 99 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC----
Confidence 3568889999999 99999999975 79999999996543 334567889999999999999999999998753
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++|||||++|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 100 ----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~d 171 (389)
T 3gni_B 100 ----ELWVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSG 171 (389)
T ss_dssp ----EEEEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred ----EEEEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcc
Confidence 7899999999999999997642 23489999999999999999999997 899999999999999999999999
Q ss_pred cCCcccc---------------------------------------ccccccceeeeeeehhhhcc
Q 005898 637 YGLSIVS---------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 637 fGla~~~---------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
||.+... .|+||+||++|+|+++....
T Consensus 172 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf 237 (389)
T 3gni_B 172 LRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 237 (389)
T ss_dssp GGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence 9875310 19999999999999976543
No 152
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.95 E-value=4.2e-28 Score=247.51 Aligned_cols=167 Identities=26% Similarity=0.471 Sum_probs=138.7
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCch----hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK----YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..+.||+|+||.||+|+.. |+.||||++..... ...+.+.+|+++++.++||||++++++|.+.+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 79 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP------ 79 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-------
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC------
Confidence 56888899999999999999975 88999999865422 23567899999999999999999999998653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC--------CC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE--------HR 630 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~--------~~ 630 (671)
..++||||+++|+|.+++... .+++..+..++.|+++||+|||+....+|+||||||+||++++ ++
T Consensus 80 --~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~ 153 (271)
T 3dtc_A 80 --NLCLVMEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK 153 (271)
T ss_dssp ---CEEEEECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSC
T ss_pred --ceEEEEEcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCc
Confidence 579999999999999998642 4899999999999999999999985545999999999999986 67
Q ss_pred cEEEcccCCccccc----------------------------cccccceeeeeeehhhhc
Q 005898 631 IAKLSDYGLSIVSE----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 631 ~~ki~DfGla~~~~----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
.+||+|||+++... |+||+|+++|+|+++...
T Consensus 154 ~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p 213 (271)
T 3dtc_A 154 ILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213 (271)
T ss_dssp CEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCT
T ss_pred ceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 89999999986321 999999999999997543
No 153
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.95 E-value=4.5e-28 Score=263.69 Aligned_cols=168 Identities=26% Similarity=0.383 Sum_probs=142.6
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch--------hhHHHHHHHHHHHhcCCCCCcccccceeecC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDG 551 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 551 (671)
..++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+|+++|++++|||||++++++...
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 4578999999999999999999865 689999999864321 1223588999999999999999999998643
Q ss_pred CCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCC--
Q 005898 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-- 629 (671)
Q Consensus 552 ~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~-- 629 (671)
..++||||+++|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 213 ---------~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~ 277 (419)
T 3i6u_A 213 ---------DYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEE 277 (419)
T ss_dssp ---------EEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSS
T ss_pred ---------ceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCC
Confidence 5799999999999999887543 489999999999999999999987 79999999999999754
Q ss_pred -CcEEEcccCCccccc--------------------------------cccccceeeeeeehhhhcc
Q 005898 630 -RIAKLSDYGLSIVSE--------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 630 -~~~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
+.+||+|||+++... |+||+||++|+|+++....
T Consensus 278 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf 344 (419)
T 3i6u_A 278 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344 (419)
T ss_dssp SCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred cceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence 459999999986421 9999999999999976543
No 154
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.95 E-value=6.1e-28 Score=252.14 Aligned_cols=167 Identities=23% Similarity=0.346 Sum_probs=143.6
Q ss_pred cCCCc-CceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDM-SAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~-~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
+.|+. .++||+|+||.||+|+. .+++.||||++........+.+.+|++++.++ +||||+++++++.+.+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~------- 84 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED------- 84 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-------
Confidence 34655 47899999999999985 47999999999766555567899999999885 7999999999998753
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc---EEEcc
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI---AKLSD 636 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~ki~D 636 (671)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 85 -~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~D 157 (316)
T 2ac3_A 85 -RFYLVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICD 157 (316)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred -EEEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEE
Confidence 7899999999999999997643 489999999999999999999997 8999999999999998766 99999
Q ss_pred cCCcccc------------------------------------------ccccccceeeeeeehhhhcc
Q 005898 637 YGLSIVS------------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 637 fGla~~~------------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
||+++.. .|+||+||++|+|+++....
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 226 (316)
T 2ac3_A 158 FDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226 (316)
T ss_dssp TTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSC
T ss_pred ccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCC
Confidence 9987421 19999999999999976543
No 155
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.95 E-value=7.9e-28 Score=247.71 Aligned_cols=167 Identities=24% Similarity=0.441 Sum_probs=141.8
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchh---h----HHHHHHHHHHHhcCCCCCcccccceeecCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKY---T----VRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~---~----~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 554 (671)
++|+..+.||+|+||.||+|+.. +++.||||++...... . .+++.+|++++++++||||+++++++.+.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 95 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--- 95 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT---
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC---
Confidence 56888899999999999999974 7899999998643221 1 16789999999999999999999998653
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc---
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI--- 631 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~--- 631 (671)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.. ++|+||||||+||+++.++.
T Consensus 96 -------~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~ 165 (287)
T 4f0f_A 96 -------PRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAP 165 (287)
T ss_dssp -------TEEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCS
T ss_pred -------CeEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCc
Confidence 279999999999999887543 35999999999999999999999872 23999999999999988776
Q ss_pred --EEEcccCCccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 632 --AKLSDYGLSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 632 --~ki~DfGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+||+|||+++... |+||+||++|+|+++...
T Consensus 166 ~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 227 (287)
T 4f0f_A 166 VCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227 (287)
T ss_dssp CCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCT
T ss_pred eeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCC
Confidence 9999999885321 999999999999997544
No 156
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.95 E-value=9.1e-28 Score=252.30 Aligned_cols=158 Identities=23% Similarity=0.345 Sum_probs=137.9
Q ss_pred CceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCC-CCCcccccceeecCCCCCCcccceEEEE
Q 005898 488 SAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVNKVFLV 565 (671)
Q Consensus 488 ~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~~~~~~~Lv 565 (671)
.+.||+|+||.||+|+.. +++.||||++... ....+.+|++++..++ |||||++++++.+.. ..++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--------~~~lv 84 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--------HTFLV 84 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--------EEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--------EEEEE
Confidence 478999999999999975 6899999999643 3467789999999997 999999999998653 68999
Q ss_pred EecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC---cEEEcccCCccc
Q 005898 566 YEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR---IAKLSDYGLSIV 642 (671)
Q Consensus 566 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~---~~ki~DfGla~~ 642 (671)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.
T Consensus 85 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 85 MELLNGGELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp ECCCCSCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EEccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 99999999999998643 499999999999999999999987 899999999999998665 899999999964
Q ss_pred cc------------------------------cccccceeeeeeehhhhc
Q 005898 643 SE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 643 ~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
.. |+||+||++|+|+++...
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p 208 (325)
T 3kn6_A 159 KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208 (325)
T ss_dssp CCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred cCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCC
Confidence 21 999999999999997554
No 157
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.95 E-value=9.8e-28 Score=248.41 Aligned_cols=169 Identities=24% Similarity=0.407 Sum_probs=143.7
Q ss_pred cCCCcCceeccCCceEEEEEEEcC----CcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLEN----GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
..|+..+.||+|+||.||+|+..+ +..||||.+.... ....+++.+|++++++++||||++++++|.+.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 99 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE----- 99 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS-----
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCC-----
Confidence 457778999999999999998642 2368999987543 344678999999999999999999999987543
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
...++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 100 --~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 172 (298)
T 3f66_A 100 --GSPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADF 172 (298)
T ss_dssp --SCCEEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSC
T ss_pred --CceEEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcc
Confidence 25789999999999999997532 3489999999999999999999997 8999999999999999999999999
Q ss_pred CCcccc----------------------------------ccccccceeeeeeehhhhcc
Q 005898 638 GLSIVS----------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 638 Gla~~~----------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
|+++.. .|+||+|+++|+|+++...+
T Consensus 173 g~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 232 (298)
T 3f66_A 173 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 232 (298)
T ss_dssp GGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 998532 19999999999999965444
No 158
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.95 E-value=6.9e-28 Score=245.51 Aligned_cols=171 Identities=22% Similarity=0.363 Sum_probs=145.8
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
++|+..+.||+|+||.||+|+.+ ++.||||++.... ....+++.+|++++++++||||++++++|.+.++ .
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------~ 82 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA------P 82 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTS------S
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCC------C
Confidence 46788899999999999999985 8899999997543 3446789999999999999999999999987531 2
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla 640 (671)
..++||||+++|+|.+++.... ...+++.++..++.|+++||+|||+.. ++|+||||||+||++++++.++|+|||++
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~ 160 (271)
T 3kmu_A 83 HPTLITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVK 160 (271)
T ss_dssp SCEEEEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSC
T ss_pred CeEeeecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccce
Confidence 5799999999999999998643 235899999999999999999999862 24999999999999999999999988876
Q ss_pred cc----------------------------cccccccceeeeeeehhhhc
Q 005898 641 IV----------------------------SEDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 641 ~~----------------------------~~d~~s~g~~l~~~~~~~~~ 662 (671)
.. ..|+||+|+++|+|+++...
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 210 (271)
T 3kmu_A 161 FSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210 (271)
T ss_dssp CTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCT
T ss_pred eeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 32 13999999999999996543
No 159
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=3.8e-26 Score=251.01 Aligned_cols=172 Identities=25% Similarity=0.192 Sum_probs=87.6
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcC
Q 005898 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (671)
Q Consensus 114 l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (671)
++++++|++|+|++|.+.+. | ++++++|++|+|++|++++ +| ++.+++|++|++++|.+++. | ++.+++|+
T Consensus 81 ~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~ 151 (457)
T 3bz5_A 81 LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLT 151 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCC
T ss_pred cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCC
Confidence 55555555555555555442 2 5555555555555555554 23 55555555555555555542 2 45555555
Q ss_pred EEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCC
Q 005898 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGE 273 (671)
Q Consensus 194 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~ 273 (671)
+|++++|+..+.+ .+..+++|+.|++++|++++. | +..+++|+.|++++|++++..-.-..+|+.+++++|++++
T Consensus 152 ~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~-l~~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~- 226 (457)
T 3bz5_A 152 ELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D-VSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTE- 226 (457)
T ss_dssp EEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C-CTTCTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSC-
T ss_pred EEECCCCCccccc--ccccCCcCCEEECCCCcccee-c-cccCCCCCEEECcCCcCCeeccccCCCCCEEECcCCcccc-
Confidence 5555555444443 244555555555555555542 2 4455555555555555544311112345555555555554
Q ss_pred chhhhcCCcccceeecccccccCCCccc
Q 005898 274 IPKQYGQLNQLQQLDMSFNALRGMPPPA 301 (671)
Q Consensus 274 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 301 (671)
+| ++.+++|+.|++++|++++.++..
T Consensus 227 ip--~~~l~~L~~L~l~~N~l~~~~~~~ 252 (457)
T 3bz5_A 227 ID--VTPLTQLTYFDCSVNPLTELDVST 252 (457)
T ss_dssp CC--CTTCTTCSEEECCSSCCSCCCCTT
T ss_pred cC--ccccCCCCEEEeeCCcCCCcCHHH
Confidence 33 445555555555555555544433
No 160
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=3.9e-28 Score=256.87 Aligned_cols=167 Identities=24% Similarity=0.482 Sum_probs=141.9
Q ss_pred HhcCCCcCceeccCCceEEEEEEE------cCCcEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCCCcccccceeecCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 552 (671)
..++|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++.++ +||||+++++++.+.+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 456788899999999999999985 245689999997543 23456799999999999 8999999999998653
Q ss_pred CCCCcccceEEEEEecCCCCChhhhhhcCCCC--------------------CCCCHHHHHHHHHHHHHHHHHhcCCCCC
Q 005898 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPG--------------------KVLNWSERLAVLIGVAKAVQFLHTGVIP 612 (671)
Q Consensus 553 ~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~ 612 (671)
..++||||+++|+|.+++...... ..++|.++..++.|+++||+|||+.
T Consensus 123 --------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--- 191 (344)
T 1rjb_A 123 --------PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK--- 191 (344)
T ss_dssp --------SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred --------ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 579999999999999999764321 3489999999999999999999997
Q ss_pred CccccCCCCCceeecCCCcEEEcccCCccccc--------------------------------cccccceeeeeeeh
Q 005898 613 GFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE--------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 613 ~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~ 658 (671)
+|+||||||+||+++.++.+||+|||+++... |+||+|+++|+|++
T Consensus 192 ~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 269 (344)
T 1rjb_A 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269 (344)
T ss_dssp TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHc
Confidence 89999999999999999999999999985321 99999999999998
No 161
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.95 E-value=4.8e-28 Score=252.35 Aligned_cols=167 Identities=28% Similarity=0.471 Sum_probs=144.8
Q ss_pred hcCCCcCceeccCCceEEEEEEE------cCCcEEEEEEccCCch-hhHHHHHHHHHHHhcC-CCCCcccccceeecCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGG 553 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 553 (671)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++.++ +||||++++++|.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC-
Confidence 45688889999999999999985 3567999999975433 3457899999999999 9999999999997653
Q ss_pred CCCcccceEEEEEecCCCCChhhhhhcCCC---------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccC
Q 005898 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTP---------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (671)
Q Consensus 554 ~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrD 618 (671)
..++||||+++|+|.+++..... ...+++.++..++.|+++||+|||+. +|+|||
T Consensus 101 -------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~d 170 (313)
T 1t46_A 101 -------PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRD 170 (313)
T ss_dssp -------SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred -------CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCC
Confidence 57999999999999999976432 22589999999999999999999997 899999
Q ss_pred CCCCceeecCCCcEEEcccCCcccc--------------------------------ccccccceeeeeeehh
Q 005898 619 VKTNNILLNEHRIAKLSDYGLSIVS--------------------------------EDINSVGVRLLILMSF 659 (671)
Q Consensus 619 lk~~NiLl~~~~~~ki~DfGla~~~--------------------------------~d~~s~g~~l~~~~~~ 659 (671)
|||+||++++++.+||+|||+++.. .|+||+|+++|+|+++
T Consensus 171 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~ 243 (313)
T 1t46_A 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 243 (313)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999998532 1999999999999983
No 162
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.95 E-value=8.4e-28 Score=250.44 Aligned_cols=165 Identities=23% Similarity=0.426 Sum_probs=142.3
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++|...+.||+|+||.||+|+.. ..+|||.++.. .....+.+.+|++++++++||||+++++++.+.
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------- 104 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-------- 104 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC--------
Confidence 356888899999999999999864 36899988753 234467899999999999999999999987543
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 105 -~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~ 178 (307)
T 3lb7_A 105 -NLAIVTQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGL 178 (307)
T ss_dssp -SCEEEEECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCS
T ss_pred -cEEEEEecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCC
Confidence 4799999999999999997543 3599999999999999999999997 799999999999999999999999999
Q ss_pred cccc-----------------------------------ccccccceeeeeeehhhhc
Q 005898 640 SIVS-----------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~-----------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
++.. .|+||+||++|+|+++...
T Consensus 179 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~P 236 (307)
T 3lb7_A 179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236 (307)
T ss_dssp SCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred ceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 8521 1999999999999996543
No 163
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=7.5e-28 Score=259.32 Aligned_cols=169 Identities=25% Similarity=0.407 Sum_probs=138.5
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCC-CCCcccccceeecCCCCCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~ 556 (671)
..++|+..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+.++.+++ |||||++++++...+.
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~--- 83 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND--- 83 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS---
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC---
Confidence 4578999999999999999999864 7999999998643 3345667889999999997 9999999999976432
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
...|+|||||+ |+|..++... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 84 ---~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~D 152 (388)
T 3oz6_A 84 ---RDVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVAD 152 (388)
T ss_dssp ---SCEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred ---CEEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecC
Confidence 25899999998 6999988753 489999999999999999999997 899999999999999999999999
Q ss_pred cCCcccc----------------------------------------------------ccccccceeeeeeehhhhcc
Q 005898 637 YGLSIVS----------------------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 637 fGla~~~----------------------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
||+|+.. .|+||+||++|||++|....
T Consensus 153 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 231 (388)
T 3oz6_A 153 FGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231 (388)
T ss_dssp CTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCC
Confidence 9998531 19999999999999976443
No 164
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.95 E-value=6e-28 Score=274.80 Aligned_cols=155 Identities=25% Similarity=0.433 Sum_probs=138.0
Q ss_pred eeccCCceEEEEEEEc---CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccceEEEE
Q 005898 490 IMGEGSYGKLYKGRLE---NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLV 565 (671)
Q Consensus 490 ~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~~Lv 565 (671)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|+++|++++|||||+++++|.+. ..++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~---------~~~lv 413 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---------ALMLV 413 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS---------SEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC---------CeEEE
Confidence 7999999999999864 46689999997643 33567899999999999999999999999752 47999
Q ss_pred EecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCccccc-
Q 005898 566 YEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE- 644 (671)
Q Consensus 566 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~- 644 (671)
||||++|+|.+++... ...+++.++..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 414 ~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 9999999999999754 24599999999999999999999997 79999999999999999999999999986421
Q ss_pred --------------------------------cccccceeeeeeeh
Q 005898 645 --------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 645 --------------------------------d~~s~g~~l~~~~~ 658 (671)
|+||+||++|||++
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt 534 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999998
No 165
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.95 E-value=8.7e-28 Score=250.40 Aligned_cols=166 Identities=25% Similarity=0.364 Sum_probs=145.4
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------- 75 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR------- 75 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC-------
Confidence 56888999999999999999975 69999999986543 233567889999999999999999999998753
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++++|..++.... .+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 76 -~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 76 -RLHLVFEYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp -EEEEEEECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred -eEEEEEEeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 6899999999999998887543 389999999999999999999987 899999999999999999999999999
Q ss_pred ccccc-------------------------------cccccceeeeeeehhhhc
Q 005898 640 SIVSE-------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~~-------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
++... |+||+|+++|+|+++...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p 202 (311)
T 4agu_A 149 ARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPL 202 (311)
T ss_dssp CEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred chhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence 85321 999999999999997543
No 166
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.95 E-value=7.2e-28 Score=253.92 Aligned_cols=166 Identities=20% Similarity=0.513 Sum_probs=142.7
Q ss_pred hcCCCcCceeccCCceEEEEEEE--------cCCcEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCCCcccccceeecC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL--------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDG 551 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~--------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 551 (671)
.++|+..+.||+|+||.||+|+. .++..||||++.... ....+++.+|+++++++ +||||++++++|.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 46788899999999999999986 346789999997543 34567899999999999 899999999999765
Q ss_pred CCCCCcccceEEEEEecCCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccC
Q 005898 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (671)
Q Consensus 552 ~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrD 618 (671)
+ ..++||||+++|+|.+++..... ...+++.++..++.|+++||+|||+. +|+|||
T Consensus 114 ~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 182 (334)
T 2pvf_A 114 G--------PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRD 182 (334)
T ss_dssp S--------CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred C--------ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCC
Confidence 3 67999999999999999976432 23489999999999999999999997 899999
Q ss_pred CCCCceeecCCCcEEEcccCCccccc--------------------------------cccccceeeeeeeh
Q 005898 619 VKTNNILLNEHRIAKLSDYGLSIVSE--------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 619 lk~~NiLl~~~~~~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~ 658 (671)
|||+||++++++.+||+|||+++... |+||+|+++|+|++
T Consensus 183 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt 254 (334)
T 2pvf_A 183 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254 (334)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred CccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHh
Confidence 99999999999999999999985321 99999999999998
No 167
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=7e-28 Score=257.53 Aligned_cols=172 Identities=22% Similarity=0.325 Sum_probs=140.4
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.+.|+..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++||||+++++++......+ .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~--~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLD--D 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTT--T
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccc--c
Confidence 356888999999999999999964 7999999999543 2334577899999999999999999999987653111 1
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
....++||||+ +++|.+++... .+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 23569999999 78999998753 389999999999999999999997 89999999999999999999999999
Q ss_pred Cccccc----------------------------cccccceeeeeeehhhhcc
Q 005898 639 LSIVSE----------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 639 la~~~~----------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
+++..+ |+||+||++|+|++|....
T Consensus 174 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 226 (367)
T 1cm8_A 174 LARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF 226 (367)
T ss_dssp TCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred cccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCC
Confidence 986421 9999999999999976543
No 168
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=246.92 Aligned_cols=168 Identities=22% Similarity=0.333 Sum_probs=144.4
Q ss_pred CCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccceE
Q 005898 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (671)
Q Consensus 484 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 562 (671)
.+....+||+|+||.||+|+. .+++.||||.+........+.+.+|+.++++++||||+++++++.+.+ ..
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--------~~ 94 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--------FI 94 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT--------EE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--------cE
Confidence 355566899999999999996 478899999997765555678999999999999999999999998653 68
Q ss_pred EEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC-CCcEEEcccCCcc
Q 005898 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-HRIAKLSDYGLSI 641 (671)
Q Consensus 563 ~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~ki~DfGla~ 641 (671)
++||||+++|+|.+++........+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 95 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 99999999999999998754444578999999999999999999997 8999999999999997 8999999999885
Q ss_pred cc--------------------------------ccccccceeeeeeehhhhc
Q 005898 642 VS--------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 642 ~~--------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
.. .|+||+|+++|+|+++...
T Consensus 172 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 224 (295)
T 2clq_A 172 RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224 (295)
T ss_dssp ESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCT
T ss_pred ccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 31 1999999999999997543
No 169
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.95 E-value=6.5e-28 Score=245.39 Aligned_cols=163 Identities=23% Similarity=0.431 Sum_probs=145.0
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccceE
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 562 (671)
++|+..+.||+|+||.||+|+..+++.||||++..... ..+++.+|++++++++||||+++++++.+.+ ..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~~ 78 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--------PI 78 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--------SC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--------Ce
Confidence 46778899999999999999988888999999976433 3468999999999999999999999997653 57
Q ss_pred EEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCccc
Q 005898 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (671)
Q Consensus 563 ~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~ 642 (671)
++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 153 (267)
T 3t9t_A 79 CLVTEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRF 153 (267)
T ss_dssp EEEECCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEeCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccc
Confidence 99999999999999997642 3489999999999999999999997 799999999999999999999999999864
Q ss_pred c-------------------------------ccccccceeeeeeehh
Q 005898 643 S-------------------------------EDINSVGVRLLILMSF 659 (671)
Q Consensus 643 ~-------------------------------~d~~s~g~~l~~~~~~ 659 (671)
. .|+||+|+++|+|+++
T Consensus 154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~ 201 (267)
T 3t9t_A 154 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 201 (267)
T ss_dssp BCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhcc
Confidence 2 1999999999999984
No 170
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.3e-27 Score=242.23 Aligned_cols=233 Identities=23% Similarity=0.227 Sum_probs=184.8
Q ss_pred CCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCc-CCCCCCcccCCCCCcCEE
Q 005898 117 LTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNF-FNNTIPNWFDSLPSLTFL 195 (671)
Q Consensus 117 l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L 195 (671)
.++|++|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..+..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3589999999999988888889999999999999999998889999999999999999997 776668899999999999
Q ss_pred EcccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCC---CCCccEEEcCCCCCC
Q 005898 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNNSFS 271 (671)
Q Consensus 196 ~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~---~~~L~~l~l~~N~l~ 271 (671)
++++|++++..|..+..+++|++|++++|.+++..+. +..+++|++|++++|++++..+.. ..+|+.+++++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 9999999988888899999999999999999987765 788999999999999887655432 346777777777777
Q ss_pred CCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCC
Q 005898 272 GEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCL 350 (671)
Q Consensus 272 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~ 350 (671)
+..|..|..+++|+.|++++|++++.++..+..+++|+.|+|++|.++...+.. .....++.++.+.|.+.+..|..+
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGG
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHh
Confidence 766777777777777777777777777666777777777777777776543321 001123444455666666666554
No 171
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.95 E-value=5.3e-28 Score=248.03 Aligned_cols=167 Identities=21% Similarity=0.396 Sum_probs=145.4
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 82 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT----- 82 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC-----
Confidence 467888999999999999999865 67899999986432 122567899999999999999999999998653
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ---~~~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Df 153 (279)
T 3fdn_A 83 ---RVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADF 153 (279)
T ss_dssp ---EEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSC
T ss_pred ---EEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEec
Confidence 6899999999999999987643 389999999999999999999987 8999999999999999999999999
Q ss_pred CCcccc----------------------------ccccccceeeeeeehhhhc
Q 005898 638 GLSIVS----------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 638 Gla~~~----------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|++... .|+||+|+++|+|+++...
T Consensus 154 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 206 (279)
T 3fdn_A 154 GWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206 (279)
T ss_dssp CEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCT
T ss_pred cccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCC
Confidence 987432 2999999999999987543
No 172
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.95 E-value=7.4e-28 Score=252.97 Aligned_cols=167 Identities=24% Similarity=0.487 Sum_probs=145.9
Q ss_pred cCCCcCceeccCCceEEEEEEE-----cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-----ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
++|+..+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+.
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 116 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---- 116 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC----
Confidence 4678889999999999999984 3688999999987666667889999999999999999999999876431
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
...++||||+++|+|.+++.... ..+++.++..++.++++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 117 --~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Df 189 (326)
T 2w1i_A 117 --RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 189 (326)
T ss_dssp ---CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCC
T ss_pred --CceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecC
Confidence 25799999999999999998643 3489999999999999999999987 8999999999999999999999999
Q ss_pred CCcccc---------------------------------ccccccceeeeeeehhh
Q 005898 638 GLSIVS---------------------------------EDINSVGVRLLILMSFF 660 (671)
Q Consensus 638 Gla~~~---------------------------------~d~~s~g~~l~~~~~~~ 660 (671)
|+++.. .|+||+|+++|+|+++.
T Consensus 190 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~ 245 (326)
T 2w1i_A 190 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245 (326)
T ss_dssp TTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTT
T ss_pred cchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcC
Confidence 998542 19999999999999964
No 173
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.95 E-value=1.3e-27 Score=250.36 Aligned_cols=165 Identities=25% Similarity=0.472 Sum_probs=144.3
Q ss_pred cCCCcCceeccCCceEEEEEEEc-----CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-----NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
+.|+..+.||+|+||.||++++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--- 107 (318)
T 3lxp_A 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA--- 107 (318)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTT---
T ss_pred HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCC---
Confidence 34588899999999999998652 68899999997643 3446779999999999999999999999987532
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
...++||||+++|+|.+++... .+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 108 ---~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~D 177 (318)
T 3lxp_A 108 ---ASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGD 177 (318)
T ss_dssp ---TEEEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred ---ceEEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECC
Confidence 3689999999999999999754 289999999999999999999997 799999999999999999999999
Q ss_pred cCCccccc---------------------------------cccccceeeeeeehhh
Q 005898 637 YGLSIVSE---------------------------------DINSVGVRLLILMSFF 660 (671)
Q Consensus 637 fGla~~~~---------------------------------d~~s~g~~l~~~~~~~ 660 (671)
||+++... |+||+|+++|+|+++.
T Consensus 178 fg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~ 234 (318)
T 3lxp_A 178 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 234 (318)
T ss_dssp GGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99985421 9999999999999974
No 174
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.94 E-value=2e-28 Score=256.54 Aligned_cols=173 Identities=21% Similarity=0.359 Sum_probs=147.3
Q ss_pred HHHHHhcCCCcCceeccCCceEEEEEEEc------CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceee
Q 005898 477 ELKEATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCI 549 (671)
Q Consensus 477 ~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 549 (671)
++....++|+..+.||+|+||.||+|+.. +++.||||.+.... ....+++.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 34445678999999999999999999753 36789999997543 334567999999999999999999999997
Q ss_pred cCCCCCCcccceEEEEEecCCCCChhhhhhcCC-------CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCC
Q 005898 550 DGGGRDDYAVNKVFLVYEFMSNGNFRTHISENT-------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTN 622 (671)
Q Consensus 550 ~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~ 622 (671)
+.+ ..++||||+++|+|.+++.... ....+++..+.+++.|+++||+|||+. +|+||||||+
T Consensus 99 ~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~ 167 (322)
T 1p4o_A 99 QGQ--------PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAAR 167 (322)
T ss_dssp SSS--------SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGG
T ss_pred cCC--------ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccc
Confidence 653 5799999999999999987421 123578999999999999999999997 7999999999
Q ss_pred ceeecCCCcEEEcccCCcccc--------------------------------ccccccceeeeeeehhh
Q 005898 623 NILLNEHRIAKLSDYGLSIVS--------------------------------EDINSVGVRLLILMSFF 660 (671)
Q Consensus 623 NiLl~~~~~~ki~DfGla~~~--------------------------------~d~~s~g~~l~~~~~~~ 660 (671)
||++++++.+||+|||+++.. .|+||+|+++|+|+++.
T Consensus 168 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g 237 (322)
T 1p4o_A 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 237 (322)
T ss_dssp GEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTS
T ss_pred eEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcC
Confidence 999999999999999998532 19999999999999843
No 175
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.94 E-value=5.9e-28 Score=248.73 Aligned_cols=169 Identities=21% Similarity=0.385 Sum_probs=144.8
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
+.|...+.||+|+||.||+|+.. ++..||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-------- 93 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH-------- 93 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--------
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC--------
Confidence 45788899999999999999965 68999999986543 234678999999999999999999999998653
Q ss_pred eEEEEEecCCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee---cCCCcEEEcc
Q 005898 561 KVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLSD 636 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~ki~D 636 (671)
..++||||+++|+|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~D 170 (285)
T 3is5_A 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIID 170 (285)
T ss_dssp EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEe
Confidence 689999999999999988642 1234599999999999999999999987 79999999999999 4568899999
Q ss_pred cCCccccc----------------------------cccccceeeeeeehhhhc
Q 005898 637 YGLSIVSE----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~~----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
||+++... |+||+|+++|+|+++...
T Consensus 171 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~p 224 (285)
T 3is5_A 171 FGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLP 224 (285)
T ss_dssp CCCCCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred eecceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCC
Confidence 99996421 999999999999997543
No 176
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.94 E-value=7.4e-28 Score=252.41 Aligned_cols=166 Identities=23% Similarity=0.359 Sum_probs=145.5
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch------hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 555 (671)
+.|+..+.||+|+||.||+|+.. +|+.||||.+..... ...+++.+|++++++++||||+++++++.+.+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 88 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--- 88 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC---
Confidence 46888999999999999999975 689999999865321 13678999999999999999999999998653
Q ss_pred CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC----c
Q 005898 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR----I 631 (671)
Q Consensus 556 ~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~----~ 631 (671)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++ .
T Consensus 89 -----~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~ 157 (321)
T 2a2a_A 89 -----DVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157 (321)
T ss_dssp -----EEEEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCC
T ss_pred -----EEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCC
Confidence 6899999999999999997543 489999999999999999999997 899999999999999887 7
Q ss_pred EEEcccCCccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 632 AKLSDYGLSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 632 ~ki~DfGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+||+|||+++... |+||+|+++|+|+++...
T Consensus 158 ~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 217 (321)
T 2a2a_A 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217 (321)
T ss_dssp EEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred EEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCC
Confidence 9999999985421 999999999999997654
No 177
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.94 E-value=1.1e-27 Score=245.01 Aligned_cols=165 Identities=24% Similarity=0.401 Sum_probs=132.9
Q ss_pred cCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 86 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD------ 86 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC------
Confidence 5788899999999999999985 478999999986542 223567899999999999999999999998653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+ +|++.+++.... .+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 87 --~~~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 157 (275)
T 2eue_A 87 --EIIMVIEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp --CEEEEEECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSS
T ss_pred --eEEEEehhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecc
Confidence 689999999 678888877543 489999999999999999999997 79999999999999999999999999
Q ss_pred Ccccc------------------------------ccccccceeeeeeehhhhc
Q 005898 639 LSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+++.. .|+||+|+++|+|+++...
T Consensus 158 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p 211 (275)
T 2eue_A 158 LSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211 (275)
T ss_dssp CC---------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCS
T ss_pred cceeccCcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCC
Confidence 88532 1999999999999997543
No 178
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.94 E-value=3.4e-28 Score=252.19 Aligned_cols=165 Identities=18% Similarity=0.411 Sum_probs=128.9
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhc--CCCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAK--LRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
++|+..+.||+|+||.||+|+.. |+.||||++.... .+++.+|.+++.. ++||||+++++++.+..+ ...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~----~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNG----TWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECS----SSE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCC----ccc
Confidence 56888999999999999999875 8899999986432 3567778888887 799999999999886531 112
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC-----CCCccccCCCCCceeecCCCcEEEc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV-----IPGFFNNRVKTNNILLNEHRIAKLS 635 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-----~~~iiHrDlk~~NiLl~~~~~~ki~ 635 (671)
..++||||+++|+|.+++... .+++..+..++.+++.||+|||... ..+|+||||||+||+++.++.+||+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEe
Confidence 689999999999999999753 3788899999999999999999321 2389999999999999999999999
Q ss_pred ccCCccc----------------------------------------cccccccceeeeeeehh
Q 005898 636 DYGLSIV----------------------------------------SEDINSVGVRLLILMSF 659 (671)
Q Consensus 636 DfGla~~----------------------------------------~~d~~s~g~~l~~~~~~ 659 (671)
|||+++. ..|+||+||++|+|+++
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g 214 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGG
T ss_pred ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhc
Confidence 9999832 12999999999999998
No 179
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.94 E-value=2.9e-28 Score=257.14 Aligned_cols=168 Identities=20% Similarity=0.322 Sum_probs=145.5
Q ss_pred HhcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCch--------hhHHHHHHHHHHHhcCCCCCcccccceeecC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK--------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDG 551 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 551 (671)
..++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 346788999999999999999985 4789999999865421 1234678899999999999999999999865
Q ss_pred CCCCCcccceEEEEEecCCCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC
Q 005898 552 GGRDDYAVNKVFLVYEFMSNG-NFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (671)
Q Consensus 552 ~~~~~~~~~~~~Lv~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~ 630 (671)
+ ..++||||+..| +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 102 ~--------~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 102 G--------FFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDF 167 (335)
T ss_dssp S--------EEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTS
T ss_pred C--------EEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCC
Confidence 3 789999999887 9999997643 499999999999999999999997 899999999999999999
Q ss_pred cEEEcccCCccccc------------------------------cccccceeeeeeehhhhc
Q 005898 631 IAKLSDYGLSIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 631 ~~ki~DfGla~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
.+||+|||+++... |+||+||++|+|+++...
T Consensus 168 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p 229 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229 (335)
T ss_dssp CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCc
Confidence 99999999986321 999999999999987654
No 180
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.94 E-value=6.1e-28 Score=277.39 Aligned_cols=169 Identities=20% Similarity=0.311 Sum_probs=146.4
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRD 555 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 555 (671)
..++|+..++||+|+||.||+|+.. +++.||||+++... ....+.+..|..++..+ +||||+++++++.+.+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--- 415 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 415 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS---
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC---
Confidence 3567999999999999999999965 68899999997432 22356788899999988 7999999999887653
Q ss_pred CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEc
Q 005898 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (671)
Q Consensus 556 ~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~ 635 (671)
..|+||||+++|+|..+++... .+++.++..++.||+.||+|||+. +|+||||||+|||+++++.+||+
T Consensus 416 -----~~~lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 416 -----RLYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp -----EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEEC
T ss_pred -----EEEEEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEe
Confidence 7899999999999999998643 389999999999999999999997 89999999999999999999999
Q ss_pred ccCCccccc------------------------------cccccceeeeeeehhhhcc
Q 005898 636 DYGLSIVSE------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 636 DfGla~~~~------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
|||+|+... |+||+||++|||++|....
T Consensus 485 DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf 542 (674)
T 3pfq_A 485 DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542 (674)
T ss_dssp CCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCC
Confidence 999987421 9999999999999976543
No 181
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.94 E-value=1.1e-27 Score=252.66 Aligned_cols=167 Identities=22% Similarity=0.307 Sum_probs=146.7
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC---chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
.++|...+.||+|+||.||+++.. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----
Confidence 456888999999999999999975 6889999998643 2345677899999999999999999999998653
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 115 ---~~~lv~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 115 ---FVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp ---EEEEEECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCC
T ss_pred ---eEEEEEecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeec
Confidence 6899999999999999887543 489999999999999999999997 8999999999999999999999999
Q ss_pred CCcccc------------------------------ccccccceeeeeeehhhhc
Q 005898 638 GLSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 638 Gla~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|+++.. .|+||+|+++|+|+++...
T Consensus 186 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 240 (335)
T 2owb_A 186 GLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240 (335)
T ss_dssp TTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred cCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCC
Confidence 998542 1999999999999997543
No 182
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.94 E-value=1.3e-27 Score=247.03 Aligned_cols=166 Identities=22% Similarity=0.310 Sum_probs=145.9
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC---chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|...+.||+|+||.||+|+.. +++.||+|.+... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 88 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND------ 88 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC------
Confidence 56788899999999999999975 6889999998643 2344677899999999999999999999998653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 89 --~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 160 (294)
T 2rku_A 89 --FVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFG 160 (294)
T ss_dssp --EEEEEEECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred --EEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEecc
Confidence 6899999999999999887543 489999999999999999999997 89999999999999999999999999
Q ss_pred Ccccc------------------------------ccccccceeeeeeehhhhc
Q 005898 639 LSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+++.. .|+||+|+++|+|+++...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p 214 (294)
T 2rku_A 161 LATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214 (294)
T ss_dssp TCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 98542 1999999999999997543
No 183
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.94 E-value=1.3e-27 Score=245.49 Aligned_cols=169 Identities=20% Similarity=0.300 Sum_probs=144.7
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCCc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 557 (671)
.++|+..+.||+|+||.||+|+.. +++.||||++... ......++.+|+..+.++ +||||+++++++.+.+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~----- 84 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD----- 84 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT-----
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-----
Confidence 456888999999999999999975 7999999998753 233456788999999999 9999999999998753
Q ss_pred ccceEEEEEecCCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC--------
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-------- 628 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~-------- 628 (671)
..++||||+++|+|.+++.... ....+++.++..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 85 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~ 158 (289)
T 1x8b_A 85 ---HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAAS 158 (289)
T ss_dssp ---EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------
T ss_pred ---eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccc
Confidence 7899999999999999997531 123589999999999999999999997 8999999999999984
Q ss_pred -----------CCcEEEcccCCcccc---------------------------ccccccceeeeeeehhhh
Q 005898 629 -----------HRIAKLSDYGLSIVS---------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 629 -----------~~~~ki~DfGla~~~---------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
...+||+|||+++.. .|+||+||++|+|+++..
T Consensus 159 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~ 229 (289)
T 1x8b_A 159 EEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP 229 (289)
T ss_dssp -----------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred cccccccccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCC
Confidence 447999999987532 299999999999998764
No 184
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.94 E-value=6.6e-28 Score=256.86 Aligned_cols=176 Identities=22% Similarity=0.311 Sum_probs=149.4
Q ss_pred cCHHHHHHHhcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCC-----CCCcccccc
Q 005898 473 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-----HPHLVCLLG 546 (671)
Q Consensus 473 ~~~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~g 546 (671)
+++++.....++|+..++||+|+||.||+|+. .+++.||||++.... ...+.+..|++++.+++ |||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 33344444567899999999999999999997 478999999997543 34567888999999987 999999999
Q ss_pred eeecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee
Q 005898 547 HCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL 626 (671)
Q Consensus 547 ~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl 626 (671)
++...+ ..++||||+ +|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||++
T Consensus 104 ~~~~~~--------~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 170 (360)
T 3llt_A 104 KFMYYD--------HMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILL 170 (360)
T ss_dssp EEEETT--------EEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred eeeECC--------eeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEE
Confidence 998753 789999999 899999997643 23489999999999999999999987 89999999999999
Q ss_pred cC-------------------------CCcEEEcccCCccccc---------------------------cccccceeee
Q 005898 627 NE-------------------------HRIAKLSDYGLSIVSE---------------------------DINSVGVRLL 654 (671)
Q Consensus 627 ~~-------------------------~~~~ki~DfGla~~~~---------------------------d~~s~g~~l~ 654 (671)
++ ++.+||+|||+++... |+||+||++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 250 (360)
T 3llt_A 171 DDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250 (360)
T ss_dssp SCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred ccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence 75 7899999999996422 9999999999
Q ss_pred eeehhhhc
Q 005898 655 ILMSFFFG 662 (671)
Q Consensus 655 ~~~~~~~~ 662 (671)
+|+++...
T Consensus 251 ell~g~~p 258 (360)
T 3llt_A 251 ELYTGSLL 258 (360)
T ss_dssp HHHHSSCS
T ss_pred HHHHCCCC
Confidence 99998543
No 185
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.94 E-value=9.1e-28 Score=246.21 Aligned_cols=164 Identities=21% Similarity=0.458 Sum_probs=143.8
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccce
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 561 (671)
.+.|+..+.||+|+||.||+|+..++..||||.+..... ..+.+.+|++++++++||||+++++++.+. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---------~ 81 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---------P 81 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---------S
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcCC---------C
Confidence 356888899999999999999988888999999975432 357899999999999999999999988642 4
Q ss_pred EEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCcc
Q 005898 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~ 641 (671)
.++||||+++|+|.+++.... ...+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 82 ~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 82 IYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp CEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cEEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccc
Confidence 799999999999999987431 12489999999999999999999987 89999999999999999999999999985
Q ss_pred ccc-------------------------------cccccceeeeeeehh
Q 005898 642 VSE-------------------------------DINSVGVRLLILMSF 659 (671)
Q Consensus 642 ~~~-------------------------------d~~s~g~~l~~~~~~ 659 (671)
... |+||+|+++|+|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~ 206 (279)
T 1qpc_A 158 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 206 (279)
T ss_dssp ECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred cccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhC
Confidence 421 999999999999983
No 186
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.94 E-value=3e-28 Score=255.85 Aligned_cols=162 Identities=23% Similarity=0.433 Sum_probs=139.0
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcE----EEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTS----VAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~----vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
++|+..+.||+|+||.||+|+.. +++. ||+|.+.... ....+.+.+|+.++++++||||++++++|.+.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 87 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS----- 87 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS-----
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC-----
Confidence 46788899999999999999864 5554 7888875432 22345678899999999999999999998643
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 88 ----~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 158 (325)
T 3kex_A 88 ----SLQLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVAD 158 (325)
T ss_dssp ----SEEEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECS
T ss_pred ----ccEEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECC
Confidence 5799999999999999997542 3488999999999999999999997 799999999999999999999999
Q ss_pred cCCccccc--------------------------------cccccceeeeeeeh
Q 005898 637 YGLSIVSE--------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 637 fGla~~~~--------------------------------d~~s~g~~l~~~~~ 658 (671)
||+++... |+||+||++|+|++
T Consensus 159 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~ 212 (325)
T 3kex_A 159 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212 (325)
T ss_dssp CSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHh
Confidence 99996431 99999999999999
No 187
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2.3e-28 Score=260.05 Aligned_cols=167 Identities=26% Similarity=0.393 Sum_probs=144.5
Q ss_pred hcCCCcCceeccCCceEEEEEEE----cCCcEEEEEEccCCc----hhhHHHHHHHHHHHhcC-CCCCcccccceeecCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL----ENGTSVAIRCLPSSK----KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 552 (671)
.++|+..+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++.++ +||||+++++++.+.+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788999999999999999986 378999999986432 12345678899999999 6999999999987653
Q ss_pred CCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcE
Q 005898 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIA 632 (671)
Q Consensus 553 ~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ 632 (671)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 133 --------~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 198 (355)
T 1vzo_A 133 --------KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHV 198 (355)
T ss_dssp --------EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred --------eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcE
Confidence 6899999999999999997643 389999999999999999999987 79999999999999999999
Q ss_pred EEcccCCcccc---------------------------------ccccccceeeeeeehhhhc
Q 005898 633 KLSDYGLSIVS---------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 633 ki~DfGla~~~---------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
||+|||+++.. .|+||+||++|+|+++...
T Consensus 199 kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~p 261 (355)
T 1vzo_A 199 VLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261 (355)
T ss_dssp EESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCT
T ss_pred EEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 99999988531 1999999999999997543
No 188
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2e-27 Score=245.79 Aligned_cols=167 Identities=21% Similarity=0.349 Sum_probs=142.5
Q ss_pred CCcCceeccCCceEEEEEEEc-CC---cEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 485 FDMSAIMGEGSYGKLYKGRLE-NG---TSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 485 f~~~~~iG~G~~g~Vy~~~~~-~g---~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
|+..++||+|+||.||+|+.. ++ ..||||.+.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 95 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE------- 95 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS-------
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC-------
Confidence 555689999999999999853 33 379999997543 345678999999999999999999999997653
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
...++||||+.+|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 96 ~~~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~ 170 (298)
T 3pls_A 96 GLPHVLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGL 170 (298)
T ss_dssp SCCEEEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTS
T ss_pred CCcEEEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCC
Confidence 23489999999999999997632 3589999999999999999999997 799999999999999999999999999
Q ss_pred cccc----------------------------------ccccccceeeeeeehhhhcc
Q 005898 640 SIVS----------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 640 a~~~----------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
++.. .|+||+|+++|+|+++...+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~ 228 (298)
T 3pls_A 171 ARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228 (298)
T ss_dssp SCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred cccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence 8521 19999999999999965544
No 189
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.94 E-value=1e-27 Score=245.60 Aligned_cols=168 Identities=22% Similarity=0.410 Sum_probs=146.4
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCch---hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN----- 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS-----
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC-----
Confidence 35688899999999999999996 4799999999864321 22467899999999999999999999998653
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 85 ---~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~df 156 (278)
T 3cok_A 85 ---YVYLVLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADF 156 (278)
T ss_dssp ---EEEEEEECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCC
T ss_pred ---eEEEEEecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEee
Confidence 6899999999999999997542 3589999999999999999999997 8999999999999999999999999
Q ss_pred CCcccc------------------------------ccccccceeeeeeehhhhc
Q 005898 638 GLSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 638 Gla~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|++... .|+||+|+++|+|+++...
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 211 (278)
T 3cok_A 157 GLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211 (278)
T ss_dssp TTCEECC----------------------------CTHHHHHHHHHHHHHHSSCS
T ss_pred cceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 998542 2999999999999987543
No 190
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.94 E-value=1.3e-27 Score=261.20 Aligned_cols=150 Identities=20% Similarity=0.375 Sum_probs=129.8
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.++|+..+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+++|++++|||||++++++...+. ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~---~~ 101 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDL---LK 101 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT---TT
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCC---Cc
Confidence 357889999999999999999965 6899999999753 23446789999999999999999999999876431 11
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
....|+||||+. |+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCC
Confidence 246899999997 5999999754 3499999999999999999999997 89999999999999999999999999
Q ss_pred Ccc
Q 005898 639 LSI 641 (671)
Q Consensus 639 la~ 641 (671)
+|+
T Consensus 175 la~ 177 (432)
T 3n9x_A 175 LAR 177 (432)
T ss_dssp TCE
T ss_pred Ccc
Confidence 985
No 191
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.94 E-value=7.2e-28 Score=274.89 Aligned_cols=155 Identities=24% Similarity=0.404 Sum_probs=137.0
Q ss_pred ceeccCCceEEEEEEEc---CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccceEE
Q 005898 489 AIMGEGSYGKLYKGRLE---NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (671)
Q Consensus 489 ~~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~~ 563 (671)
+.||+|+||.||+|.+. +++.||||+++... ....+++.+|+++|++++|||||+++++|.+. ..+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---------~~~ 445 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---------SWM 445 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---------SEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---------CEE
Confidence 47999999999999753 46789999997543 23467899999999999999999999999643 478
Q ss_pred EEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCcccc
Q 005898 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (671)
Q Consensus 564 Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~ 643 (671)
+|||||++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 446 lv~E~~~~g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 446 LVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp EEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EEEEccCCCCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 9999999999999997643 489999999999999999999997 7999999999999999999999999998532
Q ss_pred c---------------------------------cccccceeeeeeeh
Q 005898 644 E---------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 644 ~---------------------------------d~~s~g~~l~~~~~ 658 (671)
. |+||+||++|||++
T Consensus 520 ~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt 567 (635)
T 4fl3_A 520 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567 (635)
T ss_dssp TC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred ccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHh
Confidence 1 99999999999998
No 192
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.94 E-value=1.4e-27 Score=249.48 Aligned_cols=174 Identities=21% Similarity=0.345 Sum_probs=147.1
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.++|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++||||+++++++....+ ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERG----AKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEET----TEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccC----CCc
Confidence 35788899999999999999996 5799999999876666667889999999999999999999999874221 123
Q ss_pred eEEEEEecCCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 561 KVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++|+|.+++... .....+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 689999999999999998752 1234599999999999999999999997 899999999999999999999999997
Q ss_pred ccc------------------------------------------cccccccceeeeeeehhhhc
Q 005898 640 SIV------------------------------------------SEDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~------------------------------------------~~d~~s~g~~l~~~~~~~~~ 662 (671)
++. ..|+||+|+++|+|+++...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 245 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCT
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCC
Confidence 532 12999999999999987543
No 193
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.94 E-value=4e-28 Score=256.79 Aligned_cols=174 Identities=24% Similarity=0.331 Sum_probs=144.1
Q ss_pred HHHHhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC-----chhhHHHHHHHHHHHhcCCCCCcccccceeecC
Q 005898 478 LKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-----KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDG 551 (671)
Q Consensus 478 ~~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 551 (671)
+....++|+..+.||+|+||.||+|+.. +++.||||++... .....+.+.+|++++++++|||||+++++|.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3445677999999999999999999964 6889999998543 223457899999999999999999999999865
Q ss_pred CCCCCcccceEEEEEecCCCCChhhhhhcCC-------------------------------------CCCCCCHHHHHH
Q 005898 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENT-------------------------------------PGKVLNWSERLA 594 (671)
Q Consensus 552 ~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~-------------------------------------~~~~l~~~~~~~ 594 (671)
+ ..++||||+++|+|.+++.... ....+++.....
T Consensus 101 ~--------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (345)
T 3hko_A 101 Q--------YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISN 172 (345)
T ss_dssp S--------EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHH
T ss_pred C--------eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHH
Confidence 3 7899999999999999885210 011235667788
Q ss_pred HHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC--cEEEcccCCcccc-----------------------------
Q 005898 595 VLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR--IAKLSDYGLSIVS----------------------------- 643 (671)
Q Consensus 595 i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~--~~ki~DfGla~~~----------------------------- 643 (671)
++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++..
T Consensus 173 i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 249 (345)
T 3hko_A 173 IMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT 249 (345)
T ss_dssp HHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCS
T ss_pred HHHHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccC
Confidence 999999999999997 799999999999998766 8999999998531
Q ss_pred -------ccccccceeeeeeehhhhc
Q 005898 644 -------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 644 -------~d~~s~g~~l~~~~~~~~~ 662 (671)
.|+||+||++|+|+++...
T Consensus 250 ~~~~~~~~DiwslG~il~el~~g~~p 275 (345)
T 3hko_A 250 NESYGPKCDAWSAGVLLHLLLMGAVP 275 (345)
T ss_dssp SSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 1999999999999997654
No 194
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.94 E-value=1.5e-27 Score=254.25 Aligned_cols=179 Identities=20% Similarity=0.335 Sum_probs=150.0
Q ss_pred HHHHHHHhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCc-----------hhhHHHHHHHHHHHhcCCCCCccc
Q 005898 475 LEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK-----------KYTVRNLKLRLDLLAKLRHPHLVC 543 (671)
Q Consensus 475 ~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~-----------~~~~~~~~~E~~~l~~l~H~niv~ 543 (671)
.+++....+.|+..+.||+|+||.||+|+..+|+.||||++.... ....+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 467778889999999999999999999998889999999985321 112478999999999999999999
Q ss_pred ccceeecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCc
Q 005898 544 LLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNN 623 (671)
Q Consensus 544 l~g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~N 623 (671)
+++++...+.. .....++||||++ |+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|
T Consensus 94 ~~~~~~~~~~~---~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 164 (362)
T 3pg1_A 94 LRDIFVHFEEP---AMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGN 164 (362)
T ss_dssp CSEEEEECCTT---TCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred eeeeEEeccCC---CcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHH
Confidence 99998764321 1246899999998 68888887542 3589999999999999999999997 79999999999
Q ss_pred eeecCCCcEEEcccCCcccc------------------------------ccccccceeeeeeehhhhc
Q 005898 624 ILLNEHRIAKLSDYGLSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 624 iLl~~~~~~ki~DfGla~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|++++++.+||+|||+++.. .|+||+||++|+|+++...
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p 233 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233 (362)
T ss_dssp EEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred EEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCC
Confidence 99999999999999998531 1999999999999987543
No 195
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.94 E-value=6.1e-28 Score=254.08 Aligned_cols=165 Identities=17% Similarity=0.278 Sum_probs=143.0
Q ss_pred cCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
++|+..+.||+|+||.||+|+. .+|+.||||++..... .+++.+|+++++++ +||||+++++++.+.+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-------- 78 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK-------- 78 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT--------
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC--------
Confidence 5688899999999999999996 5799999999865432 24688999999999 9999999999988753
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc-----EEEc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI-----AKLS 635 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~-----~ki~ 635 (671)
..++||||+ +|+|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~ 152 (330)
T 2izr_A 79 YNAMVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHII 152 (330)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred ccEEEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEE
Confidence 689999999 99999999864 23599999999999999999999997 8999999999999998887 9999
Q ss_pred ccCCcccc-------------------------------------ccccccceeeeeeehhhhcc
Q 005898 636 DYGLSIVS-------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 636 DfGla~~~-------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
|||+++.. .|+||+||++|+|++|....
T Consensus 153 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf 217 (330)
T 2izr_A 153 DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 217 (330)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred EcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCc
Confidence 99998632 19999999999999975543
No 196
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.94 E-value=2.1e-27 Score=247.81 Aligned_cols=174 Identities=21% Similarity=0.428 Sum_probs=140.4
Q ss_pred HHhcCCCcCceeccCCceEEEEEEEc----CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCC
Q 005898 480 EATNNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGG 553 (671)
Q Consensus 480 ~~~~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 553 (671)
...++|...+.||+|+||.||+|+.. ++..||||++... .....+++.+|++++++++||||+++++++.+.+.
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567888999999999999999854 3458999999654 23445779999999999999999999999987532
Q ss_pred CCCcccceEEEEEecCCCCChhhhhhcC---CCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC
Q 005898 554 RDDYAVNKVFLVYEFMSNGNFRTHISEN---TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (671)
Q Consensus 554 ~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~ 630 (671)
. .....++||||+++|+|.+++... .....+++.++..++.|+++||+|||+. +|+||||||+||++++++
T Consensus 111 ~---~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 111 Q---GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTS
T ss_pred c---CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCC
Confidence 1 112469999999999999998542 2235699999999999999999999987 799999999999999999
Q ss_pred cEEEcccCCcccc--------------------------------ccccccceeeeeeehh
Q 005898 631 IAKLSDYGLSIVS--------------------------------EDINSVGVRLLILMSF 659 (671)
Q Consensus 631 ~~ki~DfGla~~~--------------------------------~d~~s~g~~l~~~~~~ 659 (671)
.+||+|||+++.. .|+||+|+++|+|+++
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~ 245 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTT
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhc
Confidence 9999999998532 1999999999999993
No 197
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.94 E-value=9e-28 Score=255.86 Aligned_cols=168 Identities=23% Similarity=0.317 Sum_probs=147.1
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC-chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
++|+..+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 104 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-------- 104 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--------
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--------
Confidence 56888999999999999999975 7899999999754 3344678999999999999999999999998753
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla 640 (671)
..++||||+++|+|.+++.... .+++..+..++.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 179 (360)
T 3eqc_A 105 EISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 179 (360)
T ss_dssp EEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEEECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCC
Confidence 6899999999999999997643 3899999999999999999999732 6899999999999999999999999998
Q ss_pred ccc----------------------------ccccccceeeeeeehhhhcc
Q 005898 641 IVS----------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 641 ~~~----------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
+.. .|+||+||++|+|+++....
T Consensus 180 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 230 (360)
T 3eqc_A 180 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230 (360)
T ss_dssp HHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCS
T ss_pred cccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 531 19999999999999986543
No 198
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.94 E-value=1.3e-27 Score=248.34 Aligned_cols=166 Identities=25% Similarity=0.439 Sum_probs=143.2
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccce
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 561 (671)
+.|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++.+.+ .
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~ 80 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT--------H 80 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS--------E
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC--------E
Confidence 46888999999999999999975 79999999998655445567899999999999999999999987653 6
Q ss_pred EEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee---cCCCcEEEcccC
Q 005898 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLSDYG 638 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~ki~DfG 638 (671)
.++||||+++|+|.+++.... .+++.+...++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg 154 (304)
T 2jam_A 81 YYLVMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFG 154 (304)
T ss_dssp EEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCS
T ss_pred EEEEEEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCC
Confidence 899999999999999987543 389999999999999999999997 79999999999999 788999999999
Q ss_pred Ccccc----------------------------ccccccceeeeeeehhhhc
Q 005898 639 LSIVS----------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~----------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+++.. .|+||+|+++|+|+++...
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 206 (304)
T 2jam_A 155 LSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206 (304)
T ss_dssp TTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred cceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 88632 1999999999999997543
No 199
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=7.4e-26 Score=239.66 Aligned_cols=241 Identities=23% Similarity=0.305 Sum_probs=171.5
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcC
Q 005898 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (671)
Q Consensus 114 l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (671)
+.++++|++|+|++|.+.. +| .+.++++|++|++++|.+++ +|. +..+++|++|++++|.....++. +..+++|+
T Consensus 84 ~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~ 158 (347)
T 4fmz_A 84 LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLN 158 (347)
T ss_dssp GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCC
T ss_pred hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccC-chh-hccCCceeEEECCCCCCcccccc-hhhCCCCc
Confidence 7778888888888887755 33 57788888888888888764 333 77788888888888765544443 77788888
Q ss_pred EEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCC-CCCCCccEEEcCCCCCCC
Q 005898 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLP-KLPRGLVMAFLSNNSFSG 272 (671)
Q Consensus 194 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~L~~l~l~~N~l~~ 272 (671)
+|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ ....+|+.+++++|.+++
T Consensus 159 ~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~ 235 (347)
T 4fmz_A 159 YLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITD 235 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred EEEecCCCcCCchh--hccCCCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCC
Confidence 88888887774333 7777888888888887775433 6677777777777777765443 123567777777777775
Q ss_pred CchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCC
Q 005898 273 EIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSN 352 (671)
Q Consensus 273 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~ 352 (671)
..+ +..+++|+.|++++|.+++. +.+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..+..
T Consensus 236 ~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 309 (347)
T 4fmz_A 236 LSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGG 309 (347)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHT
T ss_pred Ccc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhc
Confidence 443 77777777777777777765 3567777777777777777753 34666777777777777777777766777
Q ss_pred CCCCceeccCCCcCCC
Q 005898 353 ESDKRVVKFRGNCLSS 368 (671)
Q Consensus 353 ~~~l~~l~l~~N~l~~ 368 (671)
+++++.+++++|.+++
T Consensus 310 l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 310 LTNLTTLFLSQNHITD 325 (347)
T ss_dssp CTTCSEEECCSSSCCC
T ss_pred cccCCEEEccCCcccc
Confidence 7777777777777764
No 200
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=5.9e-26 Score=240.39 Aligned_cols=279 Identities=20% Similarity=0.282 Sum_probs=228.2
Q ss_pred CCEeEEEecCCCCCCCCCCCCcc-cccccCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEccc
Q 005898 73 NFITELKIIGDKPSNVGNFDGFA-SANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSS 151 (671)
Q Consensus 73 ~~v~~l~l~~~~~~~~~~~~~~~-~~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~ 151 (671)
..++.+++.+........+.... ....+++.|.. ..+ +.+.++++|++|+|++|.+.+. |. +..+++|++|++++
T Consensus 66 ~~L~~L~l~~n~i~~~~~~~~l~~L~~L~L~~n~i-~~~-~~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~ 141 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKI-TDI-SALQNLTNLRELYLNEDNISDI-SP-LANLTKMYSLNLGA 141 (347)
T ss_dssp TTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCC-CCC-GGGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCCEEECTT
T ss_pred CCccEEEccCCccccchhhhcCCcCCEEEccCCcc-cCc-hHHcCCCcCCEEECcCCcccCc-hh-hccCCceeEEECCC
Confidence 35777888776554432222211 11234444433 233 4699999999999999999764 43 99999999999999
Q ss_pred CcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccC
Q 005898 152 NFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP 231 (671)
Q Consensus 152 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p 231 (671)
|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+++ ++. +..+++|+.|++++|.+++..+
T Consensus 142 n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~ 216 (347)
T 4fmz_A 142 NHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITP 216 (347)
T ss_dssp CTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG
T ss_pred CCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceeecccCCCCCCch
Confidence 97665554 49999999999999999986544 8899999999999999985 444 8899999999999999997655
Q ss_pred CCCCCCCCCEEECCCCCCCCCCC-CCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCe
Q 005898 232 DLSSLGSLNVLNLSDNKLDSNLP-KLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISD 310 (671)
Q Consensus 232 ~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 310 (671)
+..+++|+.|++++|++++..+ ....+|+.+++++|.+++. +.+..+++|+.|++++|++++. +.+..+++|+.
T Consensus 217 -~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~ 291 (347)
T 4fmz_A 217 -VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNS 291 (347)
T ss_dssp -GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred -hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCE
Confidence 8889999999999999987654 2246899999999999864 4689999999999999999987 35889999999
Q ss_pred EecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCC
Q 005898 311 LNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (671)
Q Consensus 311 L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (671)
|++++|++++..|..+..+++|+.|++++|++++..| +..+++++.+++++|.++
T Consensus 292 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 292 LFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 9999999999999999999999999999999998777 778899999999999875
No 201
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.94 E-value=7.3e-28 Score=251.33 Aligned_cols=175 Identities=25% Similarity=0.427 Sum_probs=148.2
Q ss_pred CHHHHHHHhcCCCcCceeccCCceEEEEEEE------cCCcEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCCCccccc
Q 005898 474 TLEELKEATNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLL 545 (671)
Q Consensus 474 ~~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~ 545 (671)
...++....++|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++.++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3344444567899999999999999999984 356899999997643 33456799999999999 799999999
Q ss_pred ceeecCCCCCCcccceEEEEEecCCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCC
Q 005898 546 GHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIP 612 (671)
Q Consensus 546 g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~ 612 (671)
++|.+.+ ...++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+.
T Consensus 98 ~~~~~~~-------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--- 167 (316)
T 2xir_A 98 GACTKPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--- 167 (316)
T ss_dssp EEECCTT-------SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---
T ss_pred EEEecCC-------CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---
Confidence 9987643 247999999999999999976432 12388999999999999999999997
Q ss_pred CccccCCCCCceeecCCCcEEEcccCCccccc--------------------------------cccccceeeeeeeh
Q 005898 613 GFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE--------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 613 ~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~--------------------------------d~~s~g~~l~~~~~ 658 (671)
+|+||||||+||++++++.+||+|||+++... |+||+|+++|+|++
T Consensus 168 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t 245 (316)
T 2xir_A 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245 (316)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHh
Confidence 89999999999999999999999999985321 99999999999998
No 202
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.94 E-value=2.6e-27 Score=244.30 Aligned_cols=171 Identities=23% Similarity=0.359 Sum_probs=144.1
Q ss_pred CCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 484 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.|+..+.||+|+||.||+|+.. ++..||+|.+... .....+.+.+|+.++++++||||+++++++..... ...
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~~~ 102 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK----GKK 102 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS----SCE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC----CCc
Confidence 3667788999999999999864 6889999998643 23456789999999999999999999998875321 123
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec-CCCcEEEcccCC
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EHRIAKLSDYGL 639 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~ki~DfGl 639 (671)
..++||||+++|+|.+++.... .+++..+..++.+++.||+|||+.. ++|+||||||+||+++ +++.+||+|||+
T Consensus 103 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 103 CIVLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred eEEEEEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 6899999999999999997643 3899999999999999999999872 2499999999999998 789999999999
Q ss_pred ccccc---------------------------cccccceeeeeeehhhhc
Q 005898 640 SIVSE---------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~~---------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+.... |+||+|+++|+|+++...
T Consensus 179 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p 228 (290)
T 1t4h_A 179 ATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYP 228 (290)
T ss_dssp GGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred cccccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCC
Confidence 85321 999999999999997543
No 203
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.94 E-value=1.9e-27 Score=247.66 Aligned_cols=174 Identities=26% Similarity=0.373 Sum_probs=140.8
Q ss_pred HhcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCc-----hhhHHHHHHHHHHHhcC---CCCCcccccceeecC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-----KYTVRNLKLRLDLLAKL---RHPHLVCLLGHCIDG 551 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~ 551 (671)
..++|+..+.||+|+||+||+|+. .+|+.||||++.... ......+.+|+++++++ +||||++++++|.+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999995 478999999986322 11124566777776665 499999999999875
Q ss_pred CCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc
Q 005898 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI 631 (671)
Q Consensus 552 ~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 631 (671)
... .....++||||+. |+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 87 ~~~---~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RTD---REIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CSS---SEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred CCC---CceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 421 1125799999997 59999997643 23489999999999999999999997 7999999999999999999
Q ss_pred EEEcccCCccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 632 AKLSDYGLSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 632 ~ki~DfGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+||+|||+++... |+||+||++|+|+++...
T Consensus 159 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p 218 (308)
T 3g33_A 159 VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 218 (308)
T ss_dssp EEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCS
T ss_pred EEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCC
Confidence 9999999986422 999999999999987643
No 204
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.94 E-value=3.6e-26 Score=261.36 Aligned_cols=134 Identities=28% Similarity=0.276 Sum_probs=121.5
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
+++++|||++|.|++..|..|.++++|++|||++|+|++..|..|.+|++|++|+|++|++++..|.+|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999888889999999999999999999888889999999999999999999877788999999999999
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccc-cCC-CCCCCCCCEEECCCCCCCC
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGS-LPD-LSSLGSLNVLNLSDNKLDS 251 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~-~p~-~~~l~~L~~L~Ls~N~l~~ 251 (671)
++|++++..|..|+++++|++|+|++|.+++. +|. +..+++|++|++++|++++
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccc
Confidence 99999987777899999999999999999764 444 6788999999999887643
No 205
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.94 E-value=2.1e-27 Score=250.31 Aligned_cols=171 Identities=20% Similarity=0.396 Sum_probs=138.2
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHH--HhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDL--LAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++|+..+.||+|+||.||+|+. +++.||||++.... .+++..|.++ +..++||||+++++++...... ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~---~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD---GR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT---SC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccC---CC
Confidence 35788899999999999999976 58999999986443 2334444444 5568999999999866432111 12
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC------CCCccccCCCCCceeecCCCcEE
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV------IPGFFNNRVKTNNILLNEHRIAK 633 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~------~~~iiHrDlk~~NiLl~~~~~~k 633 (671)
...++||||+++|+|.+++.... .+|..+..++.|+++||+|||+.+ .++|+||||||+||++++++.+|
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 35789999999999999997543 589999999999999999999863 23799999999999999999999
Q ss_pred EcccCCcccc---------------------------------------------ccccccceeeeeeehhhhcc
Q 005898 634 LSDYGLSIVS---------------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 634 i~DfGla~~~---------------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
|+|||+++.. .|+||+||++|||+++...+
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~ 235 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence 9999998531 29999999999999985544
No 206
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.94 E-value=1.1e-27 Score=246.61 Aligned_cols=165 Identities=25% Similarity=0.486 Sum_probs=146.0
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
..++|+..+.||+|+||.||+|+.. ++..||||.+.... ...+++.+|++++++++||||+++++++.+.+
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------- 82 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP------- 82 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-------
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-------
Confidence 4567888899999999999999976 58899999997543 34578999999999999999999999987653
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++|+|.+++.... ...+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 83 -~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 83 -PFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL 157 (288)
T ss_dssp -SEEEEEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred -CEEEEEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcc
Confidence 6899999999999999997643 34589999999999999999999987 799999999999999999999999999
Q ss_pred ccccc-------------------------------cccccceeeeeeeh
Q 005898 640 SIVSE-------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 640 a~~~~-------------------------------d~~s~g~~l~~~~~ 658 (671)
++... |+||+|+++|+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~ 207 (288)
T 3kfa_A 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207 (288)
T ss_dssp GGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred ceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHh
Confidence 85421 99999999999998
No 207
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=3.1e-26 Score=250.96 Aligned_cols=219 Identities=22% Similarity=0.262 Sum_probs=197.5
Q ss_pred cCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCC
Q 005898 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (671)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (671)
+++.|......+..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|.++
T Consensus 70 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~ 149 (440)
T 3zyj_A 70 NLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE 149 (440)
T ss_dssp ECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCC
T ss_pred EccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCccc
Confidence 45666555555678999999999999999999988899999999999999999999777778999999999999999999
Q ss_pred CCCCcccCCCCCcCEEEcccccCCCCCcc-cccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCC--
Q 005898 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFPS-SIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL-- 256 (671)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~g~~p~-~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~-- 256 (671)
...+..|.++++|++|++++|+..+.+|. .|..+++|+.|+|++|.++ .+|.+..+++|+.|+|++|++++..|..
T Consensus 150 ~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 228 (440)
T 3zyj_A 150 SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQ 228 (440)
T ss_dssp EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTT
T ss_pred ccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhc
Confidence 87778999999999999999655445554 7899999999999999998 5678999999999999999999877754
Q ss_pred -CCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCc
Q 005898 257 -PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (671)
Q Consensus 257 -~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (671)
..+|+.|++++|++++..|..|..+++|+.|+|++|++++.++..+..+++|+.|+|++|.+.
T Consensus 229 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 229 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred cCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 367999999999999999999999999999999999999999999999999999999999986
No 208
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.94 E-value=1.3e-27 Score=258.24 Aligned_cols=167 Identities=20% Similarity=0.369 Sum_probs=137.6
Q ss_pred cCCCcC-ceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHH-hcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMS-AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLL-AKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|... ++||+|+||+||+|+.. +|+.||||++... ..+.+|++++ +..+||||+++++++..... ..
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~----~~ 131 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYA----GR 131 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET----TE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeeccc----CC
Confidence 345554 68999999999999965 7899999999643 3467788876 45589999999998864110 11
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC---CCcEEEcc
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAKLSD 636 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~ki~D 636 (671)
...++||||+++|+|.+++.... ...+++.++..++.||++||+|||+. +|+||||||+|||++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 36899999999999999998643 24599999999999999999999987 8999999999999997 78999999
Q ss_pred cCCccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 637 YGLSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
||+++... |+||+||++|+|++|...
T Consensus 208 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 262 (400)
T 1nxk_A 208 FGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262 (400)
T ss_dssp CTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCC
Confidence 99986421 999999999999997653
No 209
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2.2e-27 Score=250.16 Aligned_cols=163 Identities=23% Similarity=0.442 Sum_probs=139.3
Q ss_pred cCCCcCceeccCCceEEEEEEEcC-----CcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLEN-----GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~-----g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
+.|+..+.||+|+||.||+|+... +..||||++.... ....+++.+|++++++++||||+++++++.+.+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 119 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK---- 119 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC----
Confidence 356667899999999999998642 2369999997543 344567999999999999999999999997643
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|
T Consensus 120 ----~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 190 (333)
T 1mqb_A 120 ----PMMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSD 190 (333)
T ss_dssp ----SEEEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred ----CcEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECC
Confidence 6899999999999999997642 3489999999999999999999997 799999999999999999999999
Q ss_pred cCCcccc---------------------------------ccccccceeeeeeeh
Q 005898 637 YGLSIVS---------------------------------EDINSVGVRLLILMS 658 (671)
Q Consensus 637 fGla~~~---------------------------------~d~~s~g~~l~~~~~ 658 (671)
||+++.. .|+||+|+++|+|++
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt 245 (333)
T 1mqb_A 191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245 (333)
T ss_dssp CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHc
Confidence 9998532 199999999999998
No 210
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.94 E-value=2e-27 Score=244.01 Aligned_cols=165 Identities=24% Similarity=0.406 Sum_probs=144.7
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch------hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 555 (671)
++|+..+.||+|+||.||+|+.. +|+.||||.+..... ...+++.+|++++++++||||+++++++.+.+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--- 81 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC---
Confidence 45788899999999999999976 689999999864321 13678999999999999999999999998653
Q ss_pred CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC----c
Q 005898 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR----I 631 (671)
Q Consensus 556 ~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~----~ 631 (671)
..++||||+++|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||++++++ .
T Consensus 82 -----~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 82 -----DVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp -----EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCC
T ss_pred -----eEEEEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCc
Confidence 6899999999999999997543 489999999999999999999987 899999999999998877 8
Q ss_pred EEEcccCCcccc-----------------------------ccccccceeeeeeehhhh
Q 005898 632 AKLSDYGLSIVS-----------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 632 ~ki~DfGla~~~-----------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
+||+|||++... .|+||+|+++|+|+++..
T Consensus 151 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 209 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 209 (283)
T ss_dssp EEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred eEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCC
Confidence 999999998642 199999999999999754
No 211
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.94 E-value=2.7e-27 Score=243.22 Aligned_cols=167 Identities=22% Similarity=0.418 Sum_probs=144.7
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 78 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES------ 78 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC------
Confidence 467888999999999999999965 68999999986432 334577889999999999999999999997653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc---EEEc
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI---AKLS 635 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~ki~ 635 (671)
..++||||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 79 --~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 79 --FHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred --EEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 6799999999999998887643 489999999999999999999997 8999999999999986655 9999
Q ss_pred ccCCcccc-----------------------------ccccccceeeeeeehhhhc
Q 005898 636 DYGLSIVS-----------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 636 DfGla~~~-----------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|||++... .|+||+|+++|+|+++...
T Consensus 151 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p 206 (284)
T 3kk8_A 151 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206 (284)
T ss_dssp CCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred eceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCC
Confidence 99998432 2999999999999997543
No 212
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.94 E-value=1e-27 Score=253.55 Aligned_cols=163 Identities=25% Similarity=0.450 Sum_probs=139.6
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++|+..+.||+|+||+||+|+.. +|+.||||++..... +..+|++++.++ +|||||++++++.+.+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~------- 89 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGK------- 89 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSS-------
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCC-------
Confidence 456888999999999999999975 689999999975432 245678888877 7999999999998653
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCC----CcEEEc
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH----RIAKLS 635 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~----~~~ki~ 635 (671)
..++||||+++|+|.+++.... .+++.....++.+|+.||+|||+. +|+||||||+||++.++ +.+||+
T Consensus 90 -~~~lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~ 162 (342)
T 2qr7_A 90 -YVYVVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRIC 162 (342)
T ss_dssp -EEEEEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEEC
T ss_pred -EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEE
Confidence 7899999999999999987543 489999999999999999999997 89999999999998543 359999
Q ss_pred ccCCccccc------------------------------cccccceeeeeeehhhhc
Q 005898 636 DYGLSIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 636 DfGla~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
|||+++... |+||+||++|+|++|...
T Consensus 163 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P 219 (342)
T 2qr7_A 163 DFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219 (342)
T ss_dssp CCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCS
T ss_pred ECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCC
Confidence 999986421 999999999999998654
No 213
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=1.1e-25 Score=247.46 Aligned_cols=238 Identities=21% Similarity=0.181 Sum_probs=198.5
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCc
Q 005898 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (671)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (671)
.++.+++|++|+|++|.+.+. | ++++++|++|+|++|++++. | ++++++|++|++++|.+++ +| ++.+++|
T Consensus 59 ~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L 129 (457)
T 3bz5_A 59 GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLL 129 (457)
T ss_dssp TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTC
T ss_pred hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcC
Confidence 578899999999999999874 4 89999999999999999874 4 8899999999999999987 45 8899999
Q ss_pred CEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCC
Q 005898 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSG 272 (671)
Q Consensus 193 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~ 272 (671)
++|++++|++++ +| ++.+++|+.|++++|...+.+ .+..+++|+.|++++|++++....-...|+.+++++|++++
T Consensus 130 ~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~ 205 (457)
T 3bz5_A 130 TYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITK 205 (457)
T ss_dssp CEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCEEECCSSCCCCCCCTTCTTCCEEECCSSCCSC
T ss_pred CEEECCCCccce-ec--cccCCcCCEEECCCCCccccc-ccccCCcCCEEECCCCccceeccccCCCCCEEECcCCcCCe
Confidence 999999999997 43 888999999999999776666 57889999999999999988432335679999999999987
Q ss_pred CchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCC-------CccEEECcCCcCccc
Q 005898 273 EIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGG-------KLVFFDISNNKLTGG 345 (671)
Q Consensus 273 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~-------~L~~l~ls~N~l~g~ 345 (671)
. .++.+++|+.|++++|++++.+ +..+++|+.|++++|++++..+..+..+. +|+.+++++|.+.|.
T Consensus 206 ~---~l~~l~~L~~L~Ls~N~l~~ip---~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~ 279 (457)
T 3bz5_A 206 L---DLNQNIQLTFLDCSSNKLTEID---VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIY 279 (457)
T ss_dssp C---CCTTCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCE
T ss_pred e---ccccCCCCCEEECcCCcccccC---ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCc
Confidence 5 3888999999999999999953 78899999999999999987665555544 566777788877777
Q ss_pred CCCCCCCCCCCceeccCCCcCCCCcC
Q 005898 346 LPSCLSNESDKRVVKFRGNCLSSNVQ 371 (671)
Q Consensus 346 ~p~~~~~~~~l~~l~l~~N~l~~~~~ 371 (671)
+| .+.+++++.+++++|.+.+..+
T Consensus 280 ~~--~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 280 FQ--AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp EE--CTTCTTCCCCCCTTCTTCCEEE
T ss_pred cc--ccccccCCEEECCCCcccceec
Confidence 77 3567788888888887665544
No 214
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.94 E-value=2.2e-27 Score=247.48 Aligned_cols=166 Identities=17% Similarity=0.290 Sum_probs=144.4
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----- 107 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG----- 107 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC-----
Confidence 467999999999999999999975 78999999997542 223477899999999999999999999998753
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++|+|.+++.... .+++.++..++.++++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 108 ---~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Df 178 (309)
T 2h34_A 108 ---QLYVDMRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDF 178 (309)
T ss_dssp ---EEEEEEECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSC
T ss_pred ---eEEEEEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecC
Confidence 7899999999999999998643 489999999999999999999997 7999999999999999999999999
Q ss_pred CCcccc-------------------------------ccccccceeeeeeehhhh
Q 005898 638 GLSIVS-------------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 638 Gla~~~-------------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
|+++.. .|+||+|+++|+|+++..
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 233 (309)
T 2h34_A 179 GIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSP 233 (309)
T ss_dssp CC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSC
T ss_pred ccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCC
Confidence 987431 299999999999999754
No 215
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.94 E-value=9.5e-28 Score=252.56 Aligned_cols=167 Identities=20% Similarity=0.335 Sum_probs=139.8
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch--hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
..++|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 106 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH----- 106 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT-----
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC-----
Confidence 4567999999999999999999854 789999999965432 23456889999999999999999999998753
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee-----cCCCcE
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL-----NEHRIA 632 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl-----~~~~~~ 632 (671)
..++||||++ |+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+
T Consensus 107 ---~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 176 (329)
T 3gbz_A 107 ---RLHLIFEYAE-NDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVL 176 (329)
T ss_dssp ---EEEEEEECCS-EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEE
T ss_pred ---EEEEEEecCC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceE
Confidence 7899999998 59999997653 389999999999999999999997 79999999999999 455669
Q ss_pred EEcccCCccccc-------------------------------cccccceeeeeeehhhhc
Q 005898 633 KLSDYGLSIVSE-------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 633 ki~DfGla~~~~-------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
||+|||+++... |+||+||++|+|+++...
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p 237 (329)
T 3gbz_A 177 KIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPL 237 (329)
T ss_dssp EECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred EECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 999999884311 999999999999997543
No 216
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.94 E-value=1.7e-27 Score=244.45 Aligned_cols=163 Identities=22% Similarity=0.389 Sum_probs=141.7
Q ss_pred hcCCCcCceeccCCceEEEEEEEcC----CcEEEEEEccCC-chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLEN----GTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
.++|+..+.||+|+||.||+|+... +..||||.+... .....+.+.+|++++++++||||+++++++.+.
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 85 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE----- 85 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----
Confidence 4578889999999999999998642 346999999764 334567899999999999999999999998653
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|
T Consensus 86 ----~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 156 (281)
T 3cc6_A 86 ----PTWIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGD 156 (281)
T ss_dssp ----SCEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECC
T ss_pred ----CCEEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCc
Confidence 3589999999999999997542 3489999999999999999999987 799999999999999999999999
Q ss_pred cCCcccc-------------------------------ccccccceeeeeeeh
Q 005898 637 YGLSIVS-------------------------------EDINSVGVRLLILMS 658 (671)
Q Consensus 637 fGla~~~-------------------------------~d~~s~g~~l~~~~~ 658 (671)
||+++.. .|+||+|+++|+|++
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt 209 (281)
T 3cc6_A 157 FGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209 (281)
T ss_dssp CCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred cCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHh
Confidence 9988532 199999999999998
No 217
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.8e-27 Score=250.43 Aligned_cols=179 Identities=21% Similarity=0.343 Sum_probs=148.2
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCC-CCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~~~ 559 (671)
..+|+..++||+|+||.||+|+.. +++.||||++........+.+.+|+.++.+++ ||||+++++++...........
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 346888999999999999999964 78999999987666666778999999999996 9999999999864321111123
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
...++||||+. |+|.+++........+++.++..++.|++.||+|||+.. ++|+||||||+||++++++.+||+|||+
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcc
Confidence 46899999996 799998875333345999999999999999999999862 2399999999999999999999999999
Q ss_pred cccc---------------------------------------------ccccccceeeeeeehhhhc
Q 005898 640 SIVS---------------------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~---------------------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
++.. .|+||+||++|+|+++...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p 252 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCC
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCC
Confidence 8531 1999999999999987543
No 218
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=5.7e-28 Score=252.35 Aligned_cols=228 Identities=23% Similarity=0.322 Sum_probs=195.2
Q ss_pred cchhcccCCCCCCEEecccccc-cccCCcccc-------CCCCCCEEEcccCcCCCCCCccC--CCCCccCEEEccCCcC
Q 005898 109 SFVTTLARLTSLRVLSLVSLGI-WGSLPDKIH-------RLYSLEYLDLSSNFLFGSVPPKI--STMVKLQTLILDDNFF 178 (671)
Q Consensus 109 ~~~~~l~~l~~L~~L~L~~n~l-~g~~p~~~~-------~L~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l 178 (671)
.+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+ ..+++|++|+|++|.+
T Consensus 56 ~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 133 (312)
T 1wwl_A 56 ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSW 133 (312)
T ss_dssp CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBC
T ss_pred ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCC
Confidence 455555544 89999999999 567888776 89999999999999999999887 8999999999999999
Q ss_pred CCCCCcccCCC-----CCcCEEEcccccCCCCCcccccCCCCCCEEEeccCcccccc---CCC--CCCCCCCEEECCCCC
Q 005898 179 NNTIPNWFDSL-----PSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSL---PDL--SSLGSLNVLNLSDNK 248 (671)
Q Consensus 179 ~~~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~---p~~--~~l~~L~~L~Ls~N~ 248 (671)
++. |..++.+ ++|++|++++|++++..|..++.+++|++|++++|++.+.+ +.+ ..+++|++|++++|+
T Consensus 134 ~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~ 212 (312)
T 1wwl_A 134 ATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212 (312)
T ss_dssp SSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSC
T ss_pred cch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCc
Confidence 987 8888777 99999999999999888899999999999999999988753 334 889999999999999
Q ss_pred CCCC--CC-C---CCCCccEEEcCCCCCCCCch-hhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCccc
Q 005898 249 LDSN--LP-K---LPRGLVMAFLSNNSFSGEIP-KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGS 321 (671)
Q Consensus 249 l~~~--~p-~---~~~~L~~l~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ 321 (671)
+++. ++ . ...+|+.+++++|++++.+| ..+..+++|++|+|++|+++.. |..+. ++|+.|+|++|++++.
T Consensus 213 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~i-p~~~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQV-PKGLP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSC-CSSCC--SEEEEEECCSSCCCSC
T ss_pred CcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChh-hhhcc--CCceEEECCCCCCCCC
Confidence 9842 22 1 23689999999999998875 5567789999999999999954 44555 8999999999999976
Q ss_pred CCcccCCCCCccEEECcCCcCcc
Q 005898 322 LPKNLNCGGKLVFFDISNNKLTG 344 (671)
Q Consensus 322 ~p~~~~~~~~L~~l~ls~N~l~g 344 (671)
|. +..+++|+.|++++|.+++
T Consensus 290 -p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 290 -PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -CC-TTTSCEEEEEECTTCTTTC
T ss_pred -hh-HhhCCCCCEEeccCCCCCC
Confidence 66 8899999999999999986
No 219
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2.5e-27 Score=249.62 Aligned_cols=168 Identities=20% Similarity=0.417 Sum_probs=140.6
Q ss_pred HHhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcC--CCCCcccccceeecCCCCCCc
Q 005898 480 EATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL--RHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 480 ~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~g~~~~~~~~~~~ 557 (671)
...++|+..+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++... +||||+++++++.+..+
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~---- 105 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTG---- 105 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG----
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC----
Confidence 34567999999999999999999875 8999999986432 23445555665554 99999999999887532
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC-----CCCccccCCCCCceeecCCCcE
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV-----IPGFFNNRVKTNNILLNEHRIA 632 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-----~~~iiHrDlk~~NiLl~~~~~~ 632 (671)
.....++||||+++|+|.+++... .+++.++..++.+++.||+|||+.. .++|+||||||+||+++.++.+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 123689999999999999999754 3899999999999999999999862 3479999999999999999999
Q ss_pred EEcccCCcccc----------------------------------------ccccccceeeeeeehh
Q 005898 633 KLSDYGLSIVS----------------------------------------EDINSVGVRLLILMSF 659 (671)
Q Consensus 633 ki~DfGla~~~----------------------------------------~d~~s~g~~l~~~~~~ 659 (671)
||+|||+++.. .|+||+||++|||+++
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 99999998421 3999999999999998
No 220
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.94 E-value=1.7e-27 Score=244.94 Aligned_cols=166 Identities=20% Similarity=0.410 Sum_probs=144.9
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 87 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK------ 87 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC------
Confidence 56888999999999999999975 68899999986432 122467899999999999999999999998653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 88 --~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg 159 (284)
T 2vgo_A 88 --RIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 159 (284)
T ss_dssp --EEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred --EEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEeccc
Confidence 6899999999999999997643 389999999999999999999987 89999999999999999999999999
Q ss_pred Ccccc----------------------------ccccccceeeeeeehhhhc
Q 005898 639 LSIVS----------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~----------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
++... .|+||+|+++|+|+++...
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 211 (284)
T 2vgo_A 160 WSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211 (284)
T ss_dssp TCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred ccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCC
Confidence 87432 1999999999999987543
No 221
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.94 E-value=1.5e-27 Score=265.17 Aligned_cols=166 Identities=25% Similarity=0.403 Sum_probs=140.5
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
+.|+..+.||+|+||+||+|+.. ++..||||++.... ....+.+.+|+++++.++|||||+++++|.+..
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------- 109 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR------- 109 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS-------
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-------
Confidence 45888999999999999999975 78999999997543 223567899999999999999999999998753
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC---CCcEEEcc
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAKLSD 636 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~ki~D 636 (671)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 110 -~~~lv~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 182 (494)
T 3lij_A 110 -NYYLVMECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVD 182 (494)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred -EEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEE
Confidence 6899999999999999887543 389999999999999999999997 8999999999999976 45699999
Q ss_pred cCCccccc----------------------------cccccceeeeeeehhhhc
Q 005898 637 YGLSIVSE----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~~----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
||+++... |+||+||++|+|+++...
T Consensus 183 fG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~p 236 (494)
T 3lij_A 183 FGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPP 236 (494)
T ss_dssp CTTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCC
Confidence 99985422 999999999999997654
No 222
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=3.3e-26 Score=235.58 Aligned_cols=224 Identities=20% Similarity=0.237 Sum_probs=184.5
Q ss_pred CEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccc
Q 005898 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN 200 (671)
Q Consensus 121 ~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 200 (671)
+.++.+++++. .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 46777777774 456544 468999999999999877788999999999999999999888999999999999999999
Q ss_pred c-CCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhh
Q 005898 201 K-LAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQY 278 (671)
Q Consensus 201 ~-l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~ 278 (671)
. ++...|..+..+++|++|++++|.+++..|. +..+++|++|++++|++++ ..+..|
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------~~~~~~ 149 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA---------------------LPDDTF 149 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------CCTTTT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccc---------------------cCHhHh
Confidence 7 7766688899999999999999999987665 7889999999988887754 334456
Q ss_pred cCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCce
Q 005898 279 GQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRV 358 (671)
Q Consensus 279 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~ 358 (671)
+.+++|+.|++++|++++.++..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++..+..+..+++++.
T Consensus 150 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 229 (285)
T 1ozn_A 150 RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229 (285)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE
T ss_pred ccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCE
Confidence 77778888888888888777777778888888888888888777888888888888888888888765566777788888
Q ss_pred eccCCCcCCC
Q 005898 359 VKFRGNCLSS 368 (671)
Q Consensus 359 l~l~~N~l~~ 368 (671)
+++++|.+.+
T Consensus 230 L~l~~N~~~c 239 (285)
T 1ozn_A 230 LRLNDNPWVC 239 (285)
T ss_dssp EECCSSCEEC
T ss_pred EeccCCCccC
Confidence 8888887764
No 223
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.94 E-value=1e-27 Score=245.70 Aligned_cols=173 Identities=24% Similarity=0.387 Sum_probs=145.2
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|+..+.||+|+||.||+|+.. +|+.||||.+.... ....+.+.+|++++++++||||+++++++.+.. .
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~ 79 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT------N 79 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG------G
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC------C
Confidence 56888999999999999999975 78999999996532 344677999999999999999999999886432 1
Q ss_pred ceEEEEEecCCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhcCCC--CCCccccCCCCCceeecCCCcEEEcc
Q 005898 560 NKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGV--IPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~--~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
...++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.. ..+|+||||||+||++++++.+||+|
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECC
T ss_pred ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 36899999999999999987532 2345899999999999999999999862 11299999999999999999999999
Q ss_pred cCCcccc------------------------------ccccccceeeeeeehhhh
Q 005898 637 YGLSIVS------------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 637 fGla~~~------------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
||+++.. .|+||+|+++|+|+++..
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 214 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSC
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCC
Confidence 9987532 199999999999999754
No 224
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.94 E-value=2e-27 Score=243.03 Aligned_cols=167 Identities=24% Similarity=0.388 Sum_probs=146.2
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 78 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN------- 78 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC-------
Confidence 356888999999999999999975 78999999986433 234578999999999999999999999998653
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++|+|.+++... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 79 -~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 151 (276)
T 2yex_A 79 -IQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (276)
T ss_dssp -EEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred -EEEEEEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCC
Confidence 689999999999999998753 3489999999999999999999987 899999999999999999999999998
Q ss_pred cccc---------------------------------ccccccceeeeeeehhhhc
Q 005898 640 SIVS---------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~---------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+... .|+||+|+++|+|+++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p 207 (276)
T 2yex_A 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207 (276)
T ss_dssp CEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCC
Confidence 8521 1999999999999997543
No 225
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.94 E-value=1.5e-27 Score=264.62 Aligned_cols=168 Identities=24% Similarity=0.403 Sum_probs=146.5
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
.+.|+..++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG----- 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 346888999999999999999975 79999999986432 334678999999999999999999999998753
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee---cCCCcEEE
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKL 634 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~ki 634 (671)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||
T Consensus 100 ---~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 170 (484)
T 3nyv_A 100 ---YFYLVGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRI 170 (484)
T ss_dssp ---EEEEEECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred ---EEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEE
Confidence 7899999999999999987543 489999999999999999999997 79999999999999 46789999
Q ss_pred cccCCccccc----------------------------cccccceeeeeeehhhhcc
Q 005898 635 SDYGLSIVSE----------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 635 ~DfGla~~~~----------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
+|||+++... |+||+||++|+|++|....
T Consensus 171 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf 227 (484)
T 3nyv_A 171 IDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPF 227 (484)
T ss_dssp CCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred EeeeeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCC
Confidence 9999885421 9999999999999976543
No 226
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.94 E-value=2.2e-27 Score=249.98 Aligned_cols=166 Identities=25% Similarity=0.398 Sum_probs=143.7
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||++++++|.+.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 97 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK------ 97 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC------
Confidence 356888999999999999999975 68999999986443 333566889999999999999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++++|..++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 --~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 98 --RWYLVFEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp --EEEEEEECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred --EEEEEEecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCC
Confidence 6899999999999988766433 389999999999999999999997 89999999999999999999999999
Q ss_pred Ccccc-------------------------------ccccccceeeeeeehhhh
Q 005898 639 LSIVS-------------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 639 la~~~-------------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
+++.. .|+||+||++|+|+++..
T Consensus 170 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~ 223 (331)
T 4aaa_A 170 FARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEP 223 (331)
T ss_dssp TC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCC
Confidence 98531 199999999999999854
No 227
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.94 E-value=3e-27 Score=263.53 Aligned_cols=167 Identities=23% Similarity=0.374 Sum_probs=142.8
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch-------------hhHHHHHHHHHHHhcCCCCCcccccce
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK-------------YTVRNLKLRLDLLAKLRHPHLVCLLGH 547 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~g~ 547 (671)
.+.|...+.||+|+||+||+|+.. +++.||||++..... ...+++.+|++++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888999999999999999965 688999999865321 235678999999999999999999999
Q ss_pred eecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec
Q 005898 548 CIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN 627 (671)
Q Consensus 548 ~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~ 627 (671)
|.+.. ..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 115 ~~~~~--------~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~ 180 (504)
T 3q5i_A 115 FEDKK--------YFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLE 180 (504)
T ss_dssp EECSS--------EEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEES
T ss_pred EEcCC--------EEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEe
Confidence 98653 7899999999999999887643 389999999999999999999997 899999999999998
Q ss_pred CCC---cEEEcccCCccccc----------------------------cccccceeeeeeehhhhc
Q 005898 628 EHR---IAKLSDYGLSIVSE----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 628 ~~~---~~ki~DfGla~~~~----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
.++ .+||+|||+++... |+||+||++|+|++|...
T Consensus 181 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~p 246 (504)
T 3q5i_A 181 NKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPP 246 (504)
T ss_dssp STTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCC
Confidence 765 69999999986422 999999999999997554
No 228
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.94 E-value=3.2e-27 Score=252.20 Aligned_cols=171 Identities=23% Similarity=0.404 Sum_probs=147.3
Q ss_pred HHHHhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch--------hhHHHHHHHHHHHhcC-CCCCcccccce
Q 005898 478 LKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--------YTVRNLKLRLDLLAKL-RHPHLVCLLGH 547 (671)
Q Consensus 478 ~~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l-~H~niv~l~g~ 547 (671)
.....++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++.++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445567999999999999999999975 799999999864321 1245688999999999 79999999999
Q ss_pred eecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec
Q 005898 548 CIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN 627 (671)
Q Consensus 548 ~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~ 627 (671)
+...+ ..++||||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++
T Consensus 169 ~~~~~--------~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~ 234 (365)
T 2y7j_A 169 YESSS--------FMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLD 234 (365)
T ss_dssp EEBSS--------EEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred EeeCC--------EEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 87653 7899999999999999997543 489999999999999999999997 899999999999999
Q ss_pred CCCcEEEcccCCcccc-----------------------------------ccccccceeeeeeehhhhc
Q 005898 628 EHRIAKLSDYGLSIVS-----------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 628 ~~~~~ki~DfGla~~~-----------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+++.+||+|||++... .|+||+||++|+|+++...
T Consensus 235 ~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~p 304 (365)
T 2y7j_A 235 DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304 (365)
T ss_dssp TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCC
Confidence 9999999999987531 2999999999999997543
No 229
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.94 E-value=6.8e-28 Score=253.08 Aligned_cols=166 Identities=20% Similarity=0.353 Sum_probs=140.6
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchh-hHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKY-TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
++|...+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++.+.+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 73 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-------- 73 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--------
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--------
Confidence 46788899999999999999975 7899999998654322 1224567999999999999999999998653
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla 640 (671)
..++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 74 SLTLVFEYLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp CEEEEEECCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEEEEecccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccc
Confidence 6899999997 59999887643 3589999999999999999999987 8999999999999999999999999987
Q ss_pred cccc-------------------------------cccccceeeeeeehhhhc
Q 005898 641 IVSE-------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 641 ~~~~-------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+... |+||+||++|+|+++...
T Consensus 148 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p 200 (324)
T 3mtl_A 148 RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPL 200 (324)
T ss_dssp ECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 5311 999999999999997643
No 230
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=1.5e-25 Score=246.03 Aligned_cols=221 Identities=30% Similarity=0.432 Sum_probs=110.7
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCc
Q 005898 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (671)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (671)
+++++++|++|++++|.+.+ +|+.+ .+|++|++++|++++ +| .++++++|++|++++|.+++ +|... ++|
T Consensus 148 ~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L 217 (454)
T 1jl5_A 148 ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSL 217 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTC
T ss_pred ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---Ccc
Confidence 35555555555555555543 33322 245555555555543 33 35555555555555555553 33221 345
Q ss_pred CEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCC
Q 005898 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSG 272 (671)
Q Consensus 193 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~ 272 (671)
++|++++|+++ .+|. ++.+++|+.|++++|++++ +|. .+++|+.|++++|++++ +|..+.+|+.+++++|.+++
T Consensus 218 ~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~--~~~~L~~L~l~~N~l~~-l~~~~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 218 ESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPD--LPPSLEALNVRDNYLTD-LPELPQSLTFLDVSENIFSG 291 (454)
T ss_dssp CEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCS--CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSE
T ss_pred cEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-ccc--cccccCEEECCCCcccc-cCcccCcCCEEECcCCccCc
Confidence 55555555554 4442 5555555555555555554 222 12455555555555544 34444455555555555554
Q ss_pred --CchhhhcCCcccceeecccccccCCCccccCCC-CCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCC
Q 005898 273 --EIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSL-PNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSC 349 (671)
Q Consensus 273 --~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~ 349 (671)
.+| ++|+.|++++|++++.+ .+ ++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|.
T Consensus 292 l~~~~------~~L~~L~l~~N~l~~i~-----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~- 354 (454)
T 1jl5_A 292 LSELP------PNLYYLNASSNEIRSLC-----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE- 354 (454)
T ss_dssp ESCCC------TTCCEEECCSSCCSEEC-----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC-
T ss_pred ccCcC------CcCCEEECcCCcCCccc-----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc-
Confidence 222 23344444444433321 12 356666666666664 4443 355666666666666 3554
Q ss_pred CCCCCCCceeccCCCcCCC
Q 005898 350 LSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 350 ~~~~~~l~~l~l~~N~l~~ 368 (671)
.+++++.+++++|.+++
T Consensus 355 --~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 355 --LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp --CCTTCCEEECCSSCCSS
T ss_pred --hhhhccEEECCCCCCCc
Confidence 24556666666666665
No 231
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.94 E-value=2.2e-27 Score=249.64 Aligned_cols=162 Identities=25% Similarity=0.449 Sum_probs=138.6
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcE----EEEEEccCC-chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTS----VAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~----vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
++|+..++||+|+||.||+|+.. +++. ||+|.+... .....+++.+|+.++++++||||++++++|.+.
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----- 89 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 89 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-----
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-----
Confidence 56888999999999999999864 5554 577777543 233467899999999999999999999999864
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 90 ----~~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~D 160 (327)
T 3lzb_A 90 ----TVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp ----SEEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECC
T ss_pred ----CceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEcc
Confidence 4789999999999999997643 3489999999999999999999997 899999999999999999999999
Q ss_pred cCCccccc--------------------------------cccccceeeeeeeh
Q 005898 637 YGLSIVSE--------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 637 fGla~~~~--------------------------------d~~s~g~~l~~~~~ 658 (671)
||+++... |+||+||++|+|++
T Consensus 161 fG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~ 214 (327)
T 3lzb_A 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214 (327)
T ss_dssp TTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHH
Confidence 99986421 99999999999998
No 232
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=3.6e-27 Score=242.97 Aligned_cols=161 Identities=25% Similarity=0.428 Sum_probs=140.1
Q ss_pred CCCcCc-eeccCCceEEEEEEEc---CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 484 NFDMSA-IMGEGSYGKLYKGRLE---NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 484 ~f~~~~-~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
+|...+ .||+|+||.||+|+.. ++..||||++.... ....+++.+|++++++++||||+++++++...
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------- 82 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE------- 82 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS-------
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCC-------
Confidence 344444 8999999999999853 57889999997643 34567899999999999999999999998532
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|.+++... ...+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 83 --~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg 155 (287)
T 1u59_A 83 --ALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFG 155 (287)
T ss_dssp --SEEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCT
T ss_pred --CcEEEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECccc
Confidence 579999999999999999743 23589999999999999999999997 89999999999999999999999999
Q ss_pred Ccccc---------------------------------ccccccceeeeeeeh
Q 005898 639 LSIVS---------------------------------EDINSVGVRLLILMS 658 (671)
Q Consensus 639 la~~~---------------------------------~d~~s~g~~l~~~~~ 658 (671)
+++.. .|+||+|+++|+|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt 208 (287)
T 1u59_A 156 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208 (287)
T ss_dssp TCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred ceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHc
Confidence 98532 199999999999998
No 233
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.94 E-value=1.1e-27 Score=255.67 Aligned_cols=172 Identities=15% Similarity=0.288 Sum_probs=140.6
Q ss_pred hcCCCcCceeccCCceEEEEEEEcC------CcEEEEEEccCCchhh-----------HHHHHHHHHHHhcCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLEN------GTSVAIRCLPSSKKYT-----------VRNLKLRLDLLAKLRHPHLVCL 544 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vAvK~l~~~~~~~-----------~~~~~~E~~~l~~l~H~niv~l 544 (671)
.++|+..+.||+|+||.||+|+... ++.||||++....... ...+.+|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578899999999999999998754 4789999987554211 1234456677888999999999
Q ss_pred cceeecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCce
Q 005898 545 LGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNI 624 (671)
Q Consensus 545 ~g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~Ni 624 (671)
++++.+... .....++||||+ +|+|.+++.... ..++|.++..++.|++.||+|||+. +|+||||||+||
T Consensus 114 ~~~~~~~~~----~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Ni 183 (364)
T 3op5_A 114 WGSGLHDKN----GKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNL 183 (364)
T ss_dssp EEEEEEEET----TEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred EeeeeeccC----CcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHE
Confidence 999876421 113579999999 999999997642 3599999999999999999999997 899999999999
Q ss_pred eec--CCCcEEEcccCCcccc-------------------------------------ccccccceeeeeeehhhhcc
Q 005898 625 LLN--EHRIAKLSDYGLSIVS-------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 625 Ll~--~~~~~ki~DfGla~~~-------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
|++ .++.+||+|||+++.. .|+||+||++|+|+++....
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf 261 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPW 261 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred EEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 999 8899999999999431 09999999999999975443
No 234
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.94 E-value=1.3e-27 Score=247.82 Aligned_cols=169 Identities=24% Similarity=0.442 Sum_probs=145.3
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
..+.|+..+.||+|+||.||+|+.. +++.||+|.+........+++.+|++++++++||||+++++++.+.+
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 89 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG------- 89 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC--------
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC-------
Confidence 3467888999999999999999976 68999999997665556778999999999999999999999998653
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 90 -~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 163 (302)
T 2j7t_A 90 -KLWIMIEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGV 163 (302)
T ss_dssp -CEEEEEECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHH
T ss_pred -eEEEEEEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCC
Confidence 6899999999999999887532 3489999999999999999999997 799999999999999999999999998
Q ss_pred ccc-----------------------------------cccccccceeeeeeehhhhc
Q 005898 640 SIV-----------------------------------SEDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~-----------------------------------~~d~~s~g~~l~~~~~~~~~ 662 (671)
+.. ..|+||+|+++|+|+++...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 221 (302)
T 2j7t_A 164 SAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221 (302)
T ss_dssp HHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCT
T ss_pred CccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCC
Confidence 521 12999999999999987544
No 235
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=1.2e-27 Score=253.50 Aligned_cols=167 Identities=27% Similarity=0.439 Sum_probs=137.7
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchh-----hHHHHHHHHHHHhcCCCCCcccccceeecCCCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKY-----TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 554 (671)
..+.|+..+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 85 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS-- 85 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--
Confidence 3467899999999999999999965 6899999999643221 1246889999999999999999999997653
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEE
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki 634 (671)
..++||||+++ +|..++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||
T Consensus 86 ------~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 153 (346)
T 1ua2_A 86 ------NISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKL 153 (346)
T ss_dssp ------CCEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ------ceEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEE
Confidence 67999999986 8888886532 3588899999999999999999997 7999999999999999999999
Q ss_pred cccCCccccc-------------------------------cccccceeeeeeehhhh
Q 005898 635 SDYGLSIVSE-------------------------------DINSVGVRLLILMSFFF 661 (671)
Q Consensus 635 ~DfGla~~~~-------------------------------d~~s~g~~l~~~~~~~~ 661 (671)
+|||+++... |+||+||++|+|+++..
T Consensus 154 ~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 211 (346)
T 1ua2_A 154 ADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP 211 (346)
T ss_dssp CCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred EecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 9999985421 99999999999998654
No 236
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.94 E-value=1.9e-27 Score=254.11 Aligned_cols=171 Identities=20% Similarity=0.324 Sum_probs=132.2
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.++|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++++.++||||+++++++...... ..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~--~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL--EE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG--GG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcc--cc
Confidence 35788899999999999999985 47899999999653 234467788999999999999999999998764211 11
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
....++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 23579999999 6899988864 2489999999999999999999987 89999999999999999999999999
Q ss_pred Cccccc----------------------------cccccceeeeeeehhhhc
Q 005898 639 LSIVSE----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~~----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+++... |+||+||++|+|++|...
T Consensus 178 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p 229 (367)
T 2fst_X 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred ccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCC
Confidence 985421 999999999999997643
No 237
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.94 E-value=1.1e-27 Score=252.23 Aligned_cols=168 Identities=26% Similarity=0.471 Sum_probs=144.0
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CC-----cEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCCCcccccceeecCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NG-----TSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g-----~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 552 (671)
..++|+..+.||+|+||.||+|+.. ++ +.||||.+.... ....+.+.+|+++++++ +||||++++++|.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 4567888999999999999999864 23 479999997543 33467799999999999 8999999999997653
Q ss_pred CCCCcccceEEEEEecCCCCChhhhhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCC
Q 005898 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENT-----------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKT 621 (671)
Q Consensus 553 ~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~ 621 (671)
..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||
T Consensus 124 --------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 192 (333)
T 2i1m_A 124 --------PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 192 (333)
T ss_dssp --------SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred --------ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCccc
Confidence 5799999999999999986421 123589999999999999999999997 899999999
Q ss_pred CceeecCCCcEEEcccCCcccc--------------------------------ccccccceeeeeeehh
Q 005898 622 NNILLNEHRIAKLSDYGLSIVS--------------------------------EDINSVGVRLLILMSF 659 (671)
Q Consensus 622 ~NiLl~~~~~~ki~DfGla~~~--------------------------------~d~~s~g~~l~~~~~~ 659 (671)
+||++++++.+||+|||+++.. .|+||+||++|+|+++
T Consensus 193 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 262 (333)
T 2i1m_A 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262 (333)
T ss_dssp GGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred ceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcC
Confidence 9999999999999999998632 1999999999999983
No 238
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.94 E-value=3.9e-27 Score=245.39 Aligned_cols=170 Identities=19% Similarity=0.365 Sum_probs=141.7
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCC---chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
.++|+..+.||+|+||.||+|+. .+|+.||||++... .....+++.+|++++++++||||+++++++.+.+
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN----- 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----
Confidence 35688899999999999999996 47999999998642 2345678999999999999999999999998753
Q ss_pred ccceEEEEEecCCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++||||+++|+|.+++... .....+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 106 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~D 179 (310)
T 2wqm_A 106 ---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGD 179 (310)
T ss_dssp ---EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred ---cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEe
Confidence 689999999999999998642 1234589999999999999999999997 899999999999999999999999
Q ss_pred cCCcccc------------------------------ccccccceeeeeeehhhhc
Q 005898 637 YGLSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
||+++.. .|+||+|+++|+|+++...
T Consensus 180 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p 235 (310)
T 2wqm_A 180 LGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235 (310)
T ss_dssp C------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred ccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9987532 1999999999999997654
No 239
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.94 E-value=4.2e-28 Score=260.23 Aligned_cols=177 Identities=16% Similarity=0.184 Sum_probs=139.7
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCC---chhhHHHHHHHH---HHHhcCCCCCccccc-------ce
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS---KKYTVRNLKLRL---DLLAKLRHPHLVCLL-------GH 547 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~-------g~ 547 (671)
.++|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788889999999999999995 57999999999632 334467899999 566677899999998 44
Q ss_pred eecCCC---------CCCcccceEEEEEecCCCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 005898 548 CIDGGG---------RDDYAVNKVFLVYEFMSNGNFRTHISENTP----GKVLNWSERLAVLIGVAKAVQFLHTGVIPGF 614 (671)
Q Consensus 548 ~~~~~~---------~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~i 614 (671)
+.+.+. .+.......++||||+ +|+|.+++..... ...++|..+..++.||++||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 443310 0000001378999999 6899999975311 12355788999999999999999997 89
Q ss_pred cccCCCCCceeecCCCcEEEcccCCccc----------------------------------c---ccccccceeeeeee
Q 005898 615 FNNRVKTNNILLNEHRIAKLSDYGLSIV----------------------------------S---EDINSVGVRLLILM 657 (671)
Q Consensus 615 iHrDlk~~NiLl~~~~~~ki~DfGla~~----------------------------------~---~d~~s~g~~l~~~~ 657 (671)
+||||||+|||+++++.+||+|||+|+. . .|+||+||++|+|+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell 307 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999852 1 19999999999999
Q ss_pred hhhhc
Q 005898 658 SFFFG 662 (671)
Q Consensus 658 ~~~~~ 662 (671)
++...
T Consensus 308 tg~~P 312 (377)
T 3byv_A 308 CADLP 312 (377)
T ss_dssp HSSCC
T ss_pred HCCCC
Confidence 97543
No 240
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.94 E-value=3.5e-27 Score=244.70 Aligned_cols=167 Identities=20% Similarity=0.367 Sum_probs=140.6
Q ss_pred cCCCcC-ceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHH-hcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMS-AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLL-AKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~-~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|... ++||+|+||.||+|+. .+++.||||++... ..+.+|++++ +..+||||+++++++..... ..
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~----~~ 87 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYA----GR 87 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET----TE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcC----CC
Confidence 455555 7899999999999996 47899999999643 3567788887 66699999999998875110 11
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC---CCcEEEcc
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAKLSD 636 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~ki~D 636 (671)
...++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 36899999999999999998643 24599999999999999999999997 8999999999999998 78999999
Q ss_pred cCCccccc--------cccccceeeeeeehhhhc
Q 005898 637 YGLSIVSE--------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~~--------d~~s~g~~l~~~~~~~~~ 662 (671)
||+++... |+||+||++|+|+++...
T Consensus 164 fg~a~~~~~~~~~~~~DiwslG~il~el~tg~~p 197 (299)
T 3m2w_A 164 FGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPP 197 (299)
T ss_dssp CTTCEECTTCGGGGHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccccccccCCchhhHHHHHHHHHHHHHCCCC
Confidence 99997643 999999999999997544
No 241
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.94 E-value=2.9e-27 Score=241.88 Aligned_cols=165 Identities=28% Similarity=0.431 Sum_probs=145.2
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
++|+..+.||+|+||.||+|+.. +|+.||||.+.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 84 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT------ 84 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC------
Confidence 56888899999999999999975 79999999986432 123567899999999999999999999988653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+++|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 --~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg 156 (276)
T 2h6d_A 85 --DFFMVMEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFG 156 (276)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCC
T ss_pred --eEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecc
Confidence 6899999999999999997643 389999999999999999999997 79999999999999999999999999
Q ss_pred Ccccc------------------------------ccccccceeeeeeehhhh
Q 005898 639 LSIVS------------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 639 la~~~------------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
++... .|+||+|+++|+|+++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 209 (276)
T 2h6d_A 157 LSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTL 209 (276)
T ss_dssp GGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSC
T ss_pred cccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCC
Confidence 87532 199999999999999754
No 242
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.94 E-value=2.4e-27 Score=244.62 Aligned_cols=165 Identities=22% Similarity=0.446 Sum_probs=138.4
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++|+..+.||+|+||.||+|+.. ..||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------- 92 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP-------- 92 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC--------
Confidence 456888999999999999999864 359999986543 34567899999999999999999999976542
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 93 -~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (289)
T 3og7_A 93 -QLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGL 166 (289)
T ss_dssp -SCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-
T ss_pred -ccEEEEEecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEcccee
Confidence 4799999999999999996542 3589999999999999999999997 799999999999999999999999998
Q ss_pred cccc-----------------------------------ccccccceeeeeeehhhhc
Q 005898 640 SIVS-----------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~-----------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
++.. .|+||+|+++|+|+++...
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 224 (289)
T 3og7_A 167 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224 (289)
T ss_dssp -----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCT
T ss_pred ccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCC
Confidence 7421 2999999999999996543
No 243
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.94 E-value=1.9e-27 Score=255.64 Aligned_cols=175 Identities=18% Similarity=0.295 Sum_probs=139.9
Q ss_pred HHhcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC--
Q 005898 480 EATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD-- 556 (671)
Q Consensus 480 ~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~-- 556 (671)
...++|+..+.||+|+||+||+|+. .+|+.||||++..... ...+|+++|+.++|||||++++++...+....
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4567899999999999999999986 5799999999865432 23479999999999999999999866431100
Q ss_pred ----------------------------cccceEEEEEecCCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhc
Q 005898 557 ----------------------------YAVNKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLH 607 (671)
Q Consensus 557 ----------------------------~~~~~~~Lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gl~yLH 607 (671)
......++||||++ |+|.+.+... .....+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11234789999998 5887777541 12345999999999999999999999
Q ss_pred CCCCCCccccCCCCCceeec-CCCcEEEcccCCccccc------------------------------cccccceeeeee
Q 005898 608 TGVIPGFFNNRVKTNNILLN-EHRIAKLSDYGLSIVSE------------------------------DINSVGVRLLIL 656 (671)
Q Consensus 608 ~~~~~~iiHrDlk~~NiLl~-~~~~~ki~DfGla~~~~------------------------------d~~s~g~~l~~~ 656 (671)
+. +|+||||||+||+++ +++.+||+|||+|+... |+||+||++|+|
T Consensus 159 ~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 235 (383)
T 3eb0_A 159 SL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235 (383)
T ss_dssp TT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred HC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence 87 899999999999998 68999999999996421 999999999999
Q ss_pred ehhhhc
Q 005898 657 MSFFFG 662 (671)
Q Consensus 657 ~~~~~~ 662 (671)
+++...
T Consensus 236 l~g~~p 241 (383)
T 3eb0_A 236 ILGKPL 241 (383)
T ss_dssp HHSSCS
T ss_pred HhCCCC
Confidence 997643
No 244
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.94 E-value=2.6e-27 Score=248.83 Aligned_cols=165 Identities=30% Similarity=0.569 Sum_probs=141.0
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcE--EEEEEccCCc-hhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCCc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTS--VAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~--vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 557 (671)
++|+..+.||+|+||.||+|+.. ++.. ||||.+.... ....+.+.+|++++.++ +||||+++++++.+.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----- 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----- 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT-----
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC-----
Confidence 56888899999999999999864 5664 4999987532 33456789999999999 8999999999998753
Q ss_pred ccceEEEEEecCCCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCce
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENT-------------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNI 624 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~Ni 624 (671)
..++||||+++|+|.+++.... ....+++.++..++.|+++||+|||+. +|+||||||+||
T Consensus 100 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NI 173 (327)
T 1fvr_A 100 ---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNI 173 (327)
T ss_dssp ---EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred ---ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceE
Confidence 7899999999999999997542 224689999999999999999999987 899999999999
Q ss_pred eecCCCcEEEcccCCccccc-----------------------------cccccceeeeeeeh
Q 005898 625 LLNEHRIAKLSDYGLSIVSE-----------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 625 Ll~~~~~~ki~DfGla~~~~-----------------------------d~~s~g~~l~~~~~ 658 (671)
+++.++.+||+|||+++... |+||+||++|+|++
T Consensus 174 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt 236 (327)
T 1fvr_A 174 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236 (327)
T ss_dssp EECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHc
Confidence 99999999999999985211 99999999999998
No 245
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.94 E-value=2.7e-27 Score=250.53 Aligned_cols=165 Identities=19% Similarity=0.278 Sum_probs=143.4
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCC--CCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRH--PHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~~~~ 558 (671)
+.|+..+.||+|+||.||+|+..+++.||||++... .....+.+.+|++++.+++| |||+++++++.+..
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~------ 82 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ------ 82 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC------
Confidence 458888999999999999999888999999998643 33445789999999999987 99999999998653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||| +.+|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||
T Consensus 83 --~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG 152 (343)
T 3dbq_A 83 --YIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFG 152 (343)
T ss_dssp --EEEEEEC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred --EEEEEEe-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecc
Confidence 7899999 56889999998653 489999999999999999999997 799999999999997 5789999999
Q ss_pred Ccccc-------------------------------------------ccccccceeeeeeehhhhcc
Q 005898 639 LSIVS-------------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 639 la~~~-------------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
+++.. .|+||+||++|+|+++....
T Consensus 153 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf 220 (343)
T 3dbq_A 153 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220 (343)
T ss_dssp SSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcc
Confidence 98531 29999999999999976543
No 246
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.94 E-value=2e-27 Score=263.77 Aligned_cols=167 Identities=23% Similarity=0.396 Sum_probs=144.9
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
+.|+..+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++.+..
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------- 94 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS------- 94 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-------
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC-------
Confidence 46888999999999999999975 78999999985422 224577899999999999999999999998753
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec---CCCcEEEcc
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN---EHRIAKLSD 636 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~---~~~~~ki~D 636 (671)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 95 -~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 167 (486)
T 3mwu_A 95 -SFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIID 167 (486)
T ss_dssp -EEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECS
T ss_pred -EEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEE
Confidence 7899999999999999887643 389999999999999999999997 799999999999995 457899999
Q ss_pred cCCccccc----------------------------cccccceeeeeeehhhhcc
Q 005898 637 YGLSIVSE----------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 637 fGla~~~~----------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
||+++... |+||+||++|+|+++....
T Consensus 168 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf 222 (486)
T 3mwu_A 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPF 222 (486)
T ss_dssp CSCTTTBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCcCeECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 99986421 9999999999999976543
No 247
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.94 E-value=5.1e-27 Score=246.68 Aligned_cols=162 Identities=22% Similarity=0.389 Sum_probs=142.2
Q ss_pred cCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCC-CCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
++|+..+.||+|+||.||+|+. .+++.||||++.... .+.+.+|++++++++ ||||+++++++.+... .
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~------~ 106 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVS------R 106 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTT------C
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCC------C
Confidence 5688899999999999999986 478999999997543 467899999999997 9999999999986432 3
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC-cEEEcccCC
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-IAKLSDYGL 639 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~ki~DfGl 639 (671)
..++||||+++|+|.+++.. +++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 107 ~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~ 177 (330)
T 3nsz_A 107 TPALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGL 177 (330)
T ss_dssp CEEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred ceEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCC
Confidence 67999999999999998853 78999999999999999999987 899999999999999776 899999999
Q ss_pred ccccc------------------------------cccccceeeeeeehhhhc
Q 005898 640 SIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
++... |+||+||++|+|+++...
T Consensus 178 a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p 230 (330)
T 3nsz_A 178 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230 (330)
T ss_dssp CEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCC
Confidence 96321 999999999999998654
No 248
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.94 E-value=4.5e-27 Score=245.53 Aligned_cols=172 Identities=16% Similarity=0.293 Sum_probs=140.3
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCC------
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD------ 555 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~------ 555 (671)
++|+..+.||+|+||.||+|+.. +|+.||||++........+++.+|++++++++||||+++++++......-
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56888899999999999999976 58999999998766666788999999999999999999999886432100
Q ss_pred CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec-CCCcEEE
Q 005898 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EHRIAKL 634 (671)
Q Consensus 556 ~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~ki 634 (671)
.......++||||++ |+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEE
T ss_pred ccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEE
Confidence 011247899999998 699999864 2488999999999999999999997 899999999999997 5679999
Q ss_pred cccCCccccc----------------------------------cccccceeeeeeehhhhc
Q 005898 635 SDYGLSIVSE----------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 635 ~DfGla~~~~----------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+|||+++..+ |+||+||++|+|+++...
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p 224 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTL 224 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCC
Confidence 9999986321 999999999999997543
No 249
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.94 E-value=5.4e-27 Score=243.53 Aligned_cols=166 Identities=22% Similarity=0.386 Sum_probs=146.0
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.+.|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 93 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT------- 93 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-------
Confidence 356888899999999999999864 78999999996543 334678999999999999999999999998753
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++|+|.+++.. ..+++.++..++.++++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 94 -~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 165 (303)
T 3a7i_A 94 -KLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGV 165 (303)
T ss_dssp -EEEEEEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred -eEEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeeccc
Confidence 68999999999999999864 2489999999999999999999997 899999999999999999999999999
Q ss_pred ccccc------------------------------cccccceeeeeeehhhhc
Q 005898 640 SIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+.... |+||+|+++|+|+++...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 218 (303)
T 3a7i_A 166 AGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218 (303)
T ss_dssp CEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred ceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCC
Confidence 84321 999999999999997643
No 250
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.94 E-value=3.6e-27 Score=247.24 Aligned_cols=166 Identities=26% Similarity=0.390 Sum_probs=140.1
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch--------hhHHHHHHHHHHHhcCCCCCcccccceeecCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGG 552 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 552 (671)
.++|+..+.||+|+||.||+|+.. +++.||||.+..... .....+.+|++++++++||||+++++++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 87 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE- 87 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-
Confidence 356888999999999999999965 689999999864321 1234588999999999999999999998653
Q ss_pred CCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc-
Q 005898 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI- 631 (671)
Q Consensus 553 ~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~- 631 (671)
..++||||+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 88 --------~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 153 (322)
T 2ycf_A 88 --------DYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEED 153 (322)
T ss_dssp --------SEEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSS
T ss_pred --------ceEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCC
Confidence 479999999999999988753 3489999999999999999999987 8999999999999987654
Q ss_pred --EEEcccCCcccc--------------------------------ccccccceeeeeeehhhhc
Q 005898 632 --AKLSDYGLSIVS--------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 632 --~ki~DfGla~~~--------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+||+|||+++.. .|+||+||++|+|+++...
T Consensus 154 ~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 218 (322)
T 2ycf_A 154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218 (322)
T ss_dssp CCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCS
T ss_pred CeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999998542 1999999999999997654
No 251
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.94 E-value=1.4e-27 Score=244.65 Aligned_cols=163 Identities=26% Similarity=0.519 Sum_probs=138.8
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccce
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 561 (671)
.++|+..+.||+|+||.||+|+.. |+.||||++.... ..+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~~ 89 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-------GG 89 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC---------C
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-------Cc
Confidence 356888999999999999999874 8899999997543 3567999999999999999999999876543 25
Q ss_pred EEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCCcc
Q 005898 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~ 641 (671)
.++||||+++|+|.+++.... ...+++..+..++.++++||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~ 165 (278)
T 1byg_A 90 LYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 165 (278)
T ss_dssp CEEEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred eEEEEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccc
Confidence 799999999999999987532 12378999999999999999999997 79999999999999999999999999885
Q ss_pred cc---------------------------ccccccceeeeeeeh
Q 005898 642 VS---------------------------EDINSVGVRLLILMS 658 (671)
Q Consensus 642 ~~---------------------------~d~~s~g~~l~~~~~ 658 (671)
.. .|+||+|+++|+|++
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t 209 (278)
T 1byg_A 166 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred cccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHh
Confidence 32 199999999999998
No 252
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.94 E-value=1.8e-27 Score=244.26 Aligned_cols=172 Identities=22% Similarity=0.394 Sum_probs=143.8
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCC------
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR------ 554 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~------ 554 (671)
..+|+..+.||+|+||.||+|+.. +++.||||++.... +.+.+|++++++++||||+++++++...+-.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 356888999999999999999976 79999999997543 3567899999999999999999987541100
Q ss_pred --CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcE
Q 005898 555 --DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIA 632 (671)
Q Consensus 555 --~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ 632 (671)
........++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 0001235799999999999999997532 23589999999999999999999987 89999999999999999999
Q ss_pred EEcccCCcccc-----------------------------ccccccceeeeeeehhhh
Q 005898 633 KLSDYGLSIVS-----------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 633 ki~DfGla~~~-----------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
||+|||+++.. .|+||+|+++|+|+++..
T Consensus 162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~ 219 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD 219 (284)
T ss_dssp EECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCS
T ss_pred EECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCC
Confidence 99999987542 199999999999998654
No 253
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.94 E-value=7e-27 Score=250.16 Aligned_cols=170 Identities=21% Similarity=0.264 Sum_probs=141.6
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.++|+..+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.+++.++||||+++++++...+.. ..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~--~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL--EE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCST--TT
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccc--cc
Confidence 357888999999999999999864 6899999999653 234456789999999999999999999998765311 11
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
....++||||+++ +|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEee
Confidence 2368999999975 78888753 288999999999999999999997 89999999999999999999999999
Q ss_pred Cccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 639 LSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+++... |+||+||++|+|++|...
T Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p 225 (371)
T 2xrw_A 173 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 225 (371)
T ss_dssp C----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred cccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence 985421 999999999999998543
No 254
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.94 E-value=6.1e-27 Score=242.35 Aligned_cols=166 Identities=22% Similarity=0.327 Sum_probs=145.0
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---------hhhHHHHHHHHHHHhcCC-CCCcccccceeec
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---------KYTVRNLKLRLDLLAKLR-HPHLVCLLGHCID 550 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---------~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~ 550 (671)
.++|+..+.||+|+||.||+|+.. +|+.||||.+.... ....+.+.+|++++.+++ ||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467888999999999999999975 68999999986432 122456889999999996 9999999999976
Q ss_pred CCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC
Q 005898 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (671)
Q Consensus 551 ~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~ 630 (671)
.. ..++||||+++|+|.+++.... .+++.++..++.+++.||+|||+. +|+||||||+||++++++
T Consensus 96 ~~--------~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~ 161 (298)
T 1phk_A 96 NT--------FFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDM 161 (298)
T ss_dssp SS--------EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred CC--------eEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCC
Confidence 53 7899999999999999997643 489999999999999999999987 899999999999999999
Q ss_pred cEEEcccCCcccc-----------------------------------ccccccceeeeeeehhhh
Q 005898 631 IAKLSDYGLSIVS-----------------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 631 ~~ki~DfGla~~~-----------------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
.+||+|||++... .|+||+|+++|+|+++..
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 227 (298)
T 1phk_A 162 NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227 (298)
T ss_dssp CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred cEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCC
Confidence 9999999988531 299999999999999754
No 255
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.94 E-value=4.9e-27 Score=252.98 Aligned_cols=164 Identities=20% Similarity=0.283 Sum_probs=142.4
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCC--chhhHHHHHHHHHHHhcCC--CCCcccccceeecCCCCCCcc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLR--HPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~~ 558 (671)
+.|+..+.||+|+||.||+|+..+++.||||++... .....+++.+|+++|.+++ |||||++++++...+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~------ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ------ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC------
Confidence 458889999999999999999878999999998643 3445678999999999997 599999999988653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||| +.+|+|.+++.... .+++.++..++.||++||+|||+. +|+||||||+|||++ ++.+||+|||
T Consensus 130 --~~~lv~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG 199 (390)
T 2zmd_A 130 --YIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFG 199 (390)
T ss_dssp --EEEEEEE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCS
T ss_pred --EEEEEEe-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecC
Confidence 6899999 56889999998653 489999999999999999999997 799999999999996 5899999999
Q ss_pred Ccccc-------------------------------------------ccccccceeeeeeehhhhc
Q 005898 639 LSIVS-------------------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~-------------------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+++.. .|+||+||++|+|+++...
T Consensus 200 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~P 266 (390)
T 2zmd_A 200 IANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266 (390)
T ss_dssp SSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCT
T ss_pred ccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCc
Confidence 98531 2999999999999987654
No 256
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.94 E-value=2.1e-27 Score=258.49 Aligned_cols=170 Identities=21% Similarity=0.303 Sum_probs=137.2
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccce
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 561 (671)
..|+..++||+|+||+||+|+.. +|+.||||++..... .+.+|+++|++++|||||+++++|...... .....
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~--~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEK--KDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETT--TTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCC--Cccee
Confidence 35788899999999999999975 699999999865432 235799999999999999999988653211 01124
Q ss_pred EEEEEecCCCCChhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCC-CcEEEcccCC
Q 005898 562 VFLVYEFMSNGNFRTHISE-NTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-RIAKLSDYGL 639 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~ki~DfGl 639 (671)
.++||||+++ ++.+.+.. ......+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999986 66665542 11234599999999999999999999987 89999999999999965 6789999999
Q ss_pred ccccc------------------------------cccccceeeeeeehhhhc
Q 005898 640 SIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
++... |+||+||++|||++|...
T Consensus 204 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~p 256 (420)
T 1j1b_A 204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256 (420)
T ss_dssp CEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred hhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 96421 999999999999998644
No 257
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=1.9e-25 Score=246.56 Aligned_cols=238 Identities=25% Similarity=0.347 Sum_probs=119.0
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCC----------
Q 005898 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIP---------- 183 (671)
Q Consensus 114 l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p---------- 183 (671)
+.++++|++|++++|.+.+..| ++++++|++|+|++|.+++. |+ +.++++|++|++++|.+++ +|
T Consensus 86 ~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~ 160 (466)
T 1o6v_A 86 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLELSSNTISD-ISALSGLTSLQQ 160 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CGGGTTCTTCSE
T ss_pred hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEECCCCccCC-ChhhccCCcccE
Confidence 4445555555555554443332 44555555555555544432 21 4444455555554444443 11
Q ss_pred ----------cccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCC
Q 005898 184 ----------NWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNL 253 (671)
Q Consensus 184 ----------~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~ 253 (671)
..+.++++|++|++++|.+++. ..+..+++|+.|++++|.+++..| ++.+++|+.|++++|++++.
T Consensus 161 L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~- 236 (466)
T 1o6v_A 161 LSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDI- 236 (466)
T ss_dssp EEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC-
T ss_pred eecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccc-
Confidence 1144555555555555555432 235555555555555555554433 44455555555555555432
Q ss_pred CCC--CCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCC
Q 005898 254 PKL--PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGK 331 (671)
Q Consensus 254 p~~--~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~ 331 (671)
+.+ ..+|+.+++++|.+++..| +..+++|+.|++++|.+++.++ +..+++|+.|++++|++++..| +..+++
T Consensus 237 ~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~ 310 (466)
T 1o6v_A 237 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKN 310 (466)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTT
T ss_pred hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCC
Confidence 211 2345555555555554433 5555555555555555555443 4555555555555555554333 444555
Q ss_pred ccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 332 LVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 332 L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
|+.|++++|++++..| +..+++++.+++++|.+++
T Consensus 311 L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 311 LTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp CSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 5555555555554444 3445555555555555543
No 258
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.94 E-value=3.8e-27 Score=250.15 Aligned_cols=174 Identities=19% Similarity=0.345 Sum_probs=142.7
Q ss_pred cCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++.+....-....
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788899999999999999997 479999999985433 2234578899999999999999999999987431100012
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
...++||||+++ +|...+.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 468999999985 7877776542 3489999999999999999999997 899999999999999999999999998
Q ss_pred cccc-----------------------------------ccccccceeeeeeehhhhc
Q 005898 640 SIVS-----------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~-----------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
++.. .|+||+||++|+|+++...
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p 228 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPI 228 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCC
Confidence 7431 0999999999999997543
No 259
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.94 E-value=3.1e-27 Score=250.33 Aligned_cols=168 Identities=19% Similarity=0.326 Sum_probs=145.6
Q ss_pred hcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchh-----------------hHHHHHHHHHHHhcCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKY-----------------TVRNLKLRLDLLAKLRHPHLVCL 544 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~-----------------~~~~~~~E~~~l~~l~H~niv~l 544 (671)
.++|+..+.||+|+||.||+|+. +|+.||||++...... ..+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788899999999999999998 8999999998643211 11789999999999999999999
Q ss_pred cceeecCCCCCCcccceEEEEEecCCCCChhhh------hhcCCCCCCCCHHHHHHHHHHHHHHHHHhcC-CCCCCcccc
Q 005898 545 LGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTH------ISENTPGKVLNWSERLAVLIGVAKAVQFLHT-GVIPGFFNN 617 (671)
Q Consensus 545 ~g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~-~~~~~iiHr 617 (671)
++++.+.+ ..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ . +|+||
T Consensus 109 ~~~~~~~~--------~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~ 176 (348)
T 2pml_X 109 EGIITNYD--------EVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHR 176 (348)
T ss_dssp SEEEESSS--------EEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECC
T ss_pred EEEEeeCC--------eEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeec
Confidence 99998753 78999999999999998 5432 13569999999999999999999998 5 89999
Q ss_pred CCCCCceeecCCCcEEEcccCCcccc------------------------------ccccccceeeeeeehhhhc
Q 005898 618 RVKTNNILLNEHRIAKLSDYGLSIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 618 Dlk~~NiLl~~~~~~ki~DfGla~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
||||+||+++.++.+||+|||++... .|+||+|+++|+|+++...
T Consensus 177 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 251 (348)
T 2pml_X 177 DVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251 (348)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999998541 2999999999999997543
No 260
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.94 E-value=8.4e-27 Score=248.86 Aligned_cols=170 Identities=21% Similarity=0.323 Sum_probs=145.1
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.+.|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++.+++||||+++++++...... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~~ 102 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE---QM 102 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT---TC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc---cc
Confidence 357888999999999999999865 78899999997543 33457789999999999999999999998764311 12
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
...++||||++ |+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 36899999997 5999988753 389999999999999999999997 899999999999999999999999998
Q ss_pred ccccc----------------------------------cccccceeeeeeehhhhc
Q 005898 640 SIVSE----------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~~----------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
++... |+||+||++|+|+++...
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p 231 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCS
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCC
Confidence 85311 999999999999997643
No 261
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.94 E-value=5.5e-27 Score=242.07 Aligned_cols=163 Identities=23% Similarity=0.373 Sum_probs=139.7
Q ss_pred cCCCcCc-eeccCCceEEEEEEEc---CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 483 NNFDMSA-IMGEGSYGKLYKGRLE---NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 483 ~~f~~~~-~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
+.|+..+ .||+|+||.||+|+.. +++.||||++.... ....+++.+|++++++++||||+++++++...
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 90 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE----- 90 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-----
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCC-----
Confidence 4566666 8999999999999642 46889999997543 23357899999999999999999999998432
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++||||+++|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 91 ----~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~D 160 (291)
T 1xbb_A 91 ----SWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISD 160 (291)
T ss_dssp ----SEEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ----CcEEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEcc
Confidence 5799999999999999998643 389999999999999999999997 899999999999999999999999
Q ss_pred cCCcccc---------------------------------ccccccceeeeeeeh-hh
Q 005898 637 YGLSIVS---------------------------------EDINSVGVRLLILMS-FF 660 (671)
Q Consensus 637 fGla~~~---------------------------------~d~~s~g~~l~~~~~-~~ 660 (671)
||+++.. .|+||+|+++|+|++ +.
T Consensus 161 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~ 218 (291)
T 1xbb_A 161 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 218 (291)
T ss_dssp CTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred CCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCC
Confidence 9998532 199999999999998 43
No 262
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.94 E-value=2e-27 Score=246.42 Aligned_cols=171 Identities=22% Similarity=0.373 Sum_probs=131.7
Q ss_pred HhcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
..++|+..+.||+|+||.||+|+. .+++.||||++.... ....+++.+|++++++++||||+++++++...+
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 86 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD------ 86 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS------
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC------
Confidence 356788999999999999999985 478999999986543 334567889999999999999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcC-----CCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEE
Q 005898 559 VNKVFLVYEFMSNGNFRTHISEN-----TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAK 633 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~-----~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~k 633 (671)
..++||||+++|+|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+|
T Consensus 87 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 161 (303)
T 2vwi_A 87 --ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQ 161 (303)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred --CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEE
Confidence 689999999999999988641 1234589999999999999999999997 799999999999999999999
Q ss_pred EcccCCcccc------------------------------------ccccccceeeeeeehhhhc
Q 005898 634 LSDYGLSIVS------------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 634 i~DfGla~~~------------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|+|||+++.. .|+||+|+++|+|+++...
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p 226 (303)
T 2vwi_A 162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226 (303)
T ss_dssp ECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred EEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999976321 1999999999999997543
No 263
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=2e-25 Score=246.37 Aligned_cols=279 Identities=24% Similarity=0.306 Sum_probs=200.6
Q ss_pred CEeEEEecCCCCCCCCCCCCcc-cccccCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccC
Q 005898 74 FITELKIIGDKPSNVGNFDGFA-SANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSN 152 (671)
Q Consensus 74 ~v~~l~l~~~~~~~~~~~~~~~-~~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N 152 (671)
.++.+++.+....+...+.... .....++.|... .+++ ++++++|++|+|++|.+.+..| +.++++|++|++++|
T Consensus 69 ~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n 144 (466)
T 1o6v_A 69 NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIA-DITP-LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSN 144 (466)
T ss_dssp TCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEE
T ss_pred CCCEEECCCCccCCchhhhccccCCEEECCCCccc-cChh-hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCC
Confidence 4677777766544322222111 111233334332 3333 7788888888888887765433 777788888888777
Q ss_pred cCCCCCC-------------------ccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCC
Q 005898 153 FLFGSVP-------------------PKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRI 213 (671)
Q Consensus 153 ~l~~~~p-------------------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l 213 (671)
.+++..+ ..+.++++|++|++++|.+++. ..+..+++|++|++++|++++..| ++.+
T Consensus 145 ~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 220 (466)
T 1o6v_A 145 TISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGIL 220 (466)
T ss_dssp EECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGC
T ss_pred ccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--cccc
Confidence 7654210 1266778888899999988753 347888999999999999887655 7778
Q ss_pred CCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCC-CCCCccEEEcCCCCCCCCchhhhcCCcccceeecccc
Q 005898 214 STLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPK-LPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFN 292 (671)
Q Consensus 214 ~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 292 (671)
++|+.|++++|.+++ ++.+..+++|+.|++++|.+++..|- -..+|+.+++++|.+++..| +..+++|+.|++++|
T Consensus 221 ~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n 297 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNEN 297 (466)
T ss_dssp TTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSS
T ss_pred CCCCEEECCCCCccc-chhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCC
Confidence 889999999888875 46677888888888888888776541 23578888888888886544 778888888888888
Q ss_pred cccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCCC
Q 005898 293 ALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSN 369 (671)
Q Consensus 293 ~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 369 (671)
++++.++ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++. ..+..+++++.+++++|.+++.
T Consensus 298 ~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 368 (466)
T 1o6v_A 298 QLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDL 368 (466)
T ss_dssp CCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBC
T ss_pred cccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCcc
Confidence 8888765 6778888888888888887666 56778888888888888764 3567778888888888887754
No 264
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.94 E-value=3.9e-27 Score=247.47 Aligned_cols=167 Identities=25% Similarity=0.462 Sum_probs=139.9
Q ss_pred hcCCCcCceeccCCceEEEEEEE------cCCcEEEEEEccCC-chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 554 (671)
.++|+..+.||+|+||.||+|+. .+++.||||.+... .....+++.+|+.++++++||||+++++++.+.+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--
Confidence 35688899999999999999984 25779999999754 3445678999999999999999999999998653
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC--
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTP----GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-- 628 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~-- 628 (671)
..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 107 ------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 107 ------PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp ------SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred ------CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCC
Confidence 56999999999999999986432 24589999999999999999999997 8999999999999984
Q ss_pred -CCcEEEcccCCcccc--------------------------------ccccccceeeeeeehh
Q 005898 629 -HRIAKLSDYGLSIVS--------------------------------EDINSVGVRLLILMSF 659 (671)
Q Consensus 629 -~~~~ki~DfGla~~~--------------------------------~d~~s~g~~l~~~~~~ 659 (671)
+..+||+|||+++.. .|+||+|+++|+|+++
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~ 241 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 241 (327)
T ss_dssp TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcC
Confidence 456999999987521 1999999999999983
No 265
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.94 E-value=2.1e-27 Score=256.22 Aligned_cols=172 Identities=20% Similarity=0.329 Sum_probs=138.2
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccceE
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 562 (671)
..|+..++||+|+||+||+|+...+..||||++...... ..+|+++|+.++|||||+++++|...+.. ......
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~--~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDK--KDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSS--SSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCC--CCceEE
Confidence 457888999999999999999877677999988654322 24699999999999999999998764321 112347
Q ss_pred EEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec-CCCcEEEcccCCcc
Q 005898 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EHRIAKLSDYGLSI 641 (671)
Q Consensus 563 ~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~ki~DfGla~ 641 (671)
++||||++++.+....+.......+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+||+|||+|+
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 89999998754443332222234589999999999999999999997 899999999999999 79999999999996
Q ss_pred ccc------------------------------cccccceeeeeeehhhhcc
Q 005898 642 VSE------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 642 ~~~------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
... |+||+||++|+|++|....
T Consensus 191 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 242 (394)
T 4e7w_A 191 ILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242 (394)
T ss_dssp ECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 421 9999999999999986543
No 266
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.93 E-value=8e-27 Score=241.57 Aligned_cols=167 Identities=25% Similarity=0.406 Sum_probs=141.8
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch--hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 75 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN------- 75 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT-------
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC-------
Confidence 56888999999999999999975 789999999865432 22467889999999999999999999998753
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||++ |+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 -~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~ 149 (299)
T 2r3i_A 76 -KLYLVFEFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149 (299)
T ss_dssp -EEEEEEECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTH
T ss_pred -ceEEEEEccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchh
Confidence 6899999998 69999987643 23488999999999999999999997 899999999999999999999999997
Q ss_pred cccc-------------------------------ccccccceeeeeeehhhhc
Q 005898 640 SIVS-------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~-------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
++.. .|+||+||++|+|+++...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 203 (299)
T 2r3i_A 150 ARAFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRAL 203 (299)
T ss_dssp HHHHCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred hhhccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCC
Confidence 7421 1999999999999997643
No 267
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.93 E-value=1.3e-26 Score=240.71 Aligned_cols=170 Identities=24% Similarity=0.377 Sum_probs=143.4
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc----hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK----KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 556 (671)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--- 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEK--- 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCC---
Confidence 467999999999999999999964 78999999986532 2235779999999999999999999999864321
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
...++||||+++| +.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 ---~~~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 81 ---QKMYMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp ----CEEEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred ---CeEEEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeec
Confidence 3689999999986 777776532 34589999999999999999999997 899999999999999999999999
Q ss_pred cCCcccc----------------------------------ccccccceeeeeeehhhhc
Q 005898 637 YGLSIVS----------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~----------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
||++... .|+||+|+++|+|+++...
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 212 (305)
T 2wtk_C 153 LGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212 (305)
T ss_dssp CTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCC
Confidence 9998532 1999999999999997543
No 268
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.93 E-value=1.9e-26 Score=243.46 Aligned_cols=169 Identities=18% Similarity=0.403 Sum_probs=142.9
Q ss_pred HHHhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhc--CCCCCcccccceeecCCCCCC
Q 005898 479 KEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAK--LRHPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 479 ~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~~~~~ 556 (671)
....++|+..+.||+|+||.||+|+. +|+.||||++... ..+++.+|++++.. ++||||+++++++....+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~--- 110 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG--- 110 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS---
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC---
Confidence 34456799999999999999999987 4899999998643 34567888888877 799999999999887542
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC-----CCCccccCCCCCceeecCCCc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV-----IPGFFNNRVKTNNILLNEHRI 631 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-----~~~iiHrDlk~~NiLl~~~~~ 631 (671)
.....++||||+++|+|.+++... .+++.++..++.+++.||+|||... ..+|+||||||+||++++++.
T Consensus 111 -~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 111 -TWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp -SCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSC
T ss_pred -ccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCC
Confidence 123689999999999999999753 3899999999999999999999310 138999999999999999999
Q ss_pred EEEcccCCccc----------------------------------------cccccccceeeeeeehh
Q 005898 632 AKLSDYGLSIV----------------------------------------SEDINSVGVRLLILMSF 659 (671)
Q Consensus 632 ~ki~DfGla~~----------------------------------------~~d~~s~g~~l~~~~~~ 659 (671)
+||+|||+++. ..|+||+||++|+|+++
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence 99999998732 13999999999999987
No 269
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.93 E-value=1.1e-26 Score=240.33 Aligned_cols=165 Identities=16% Similarity=0.250 Sum_probs=142.4
Q ss_pred cCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ..+++.+|++++.++ +|+|++++++++.+..
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-------- 79 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL-------- 79 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--------
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--------
Confidence 5688899999999999999995 579999999986443 234688899999999 7999999999987653
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc-----EEEc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI-----AKLS 635 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~-----~ki~ 635 (671)
..++||||+ +|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++. +||+
T Consensus 80 ~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~ 153 (298)
T 1csn_A 80 HNVLVIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVV 153 (298)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred eeEEEEEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEE
Confidence 689999999 999999998643 3489999999999999999999987 8999999999999987776 9999
Q ss_pred ccCCcccc-------------------------------------ccccccceeeeeeehhhhcc
Q 005898 636 DYGLSIVS-------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 636 DfGla~~~-------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
|||+++.. .|+||+|+++|+|+++....
T Consensus 154 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 218 (298)
T 1csn_A 154 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218 (298)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred ECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCc
Confidence 99998531 19999999999999876543
No 270
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.93 E-value=9.6e-27 Score=240.93 Aligned_cols=172 Identities=21% Similarity=0.374 Sum_probs=144.8
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCC-----
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD----- 555 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~----- 555 (671)
.++|+..+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++++++||||+++++++.+....-
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 456888999999999999999964 7999999999643 334578999999999999999999999887532100
Q ss_pred CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEc
Q 005898 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (671)
Q Consensus 556 ~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~ 635 (671)
.......++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence 001246899999999999999998643 3478899999999999999999997 79999999999999999999999
Q ss_pred ccCCcccc---------------------------------------------ccccccceeeeeeehh
Q 005898 636 DYGLSIVS---------------------------------------------EDINSVGVRLLILMSF 659 (671)
Q Consensus 636 DfGla~~~---------------------------------------------~d~~s~g~~l~~~~~~ 659 (671)
|||+++.. .|+||+||++|+|++.
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p 227 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSC
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhc
Confidence 99987521 1999999999999973
No 271
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.93 E-value=7.1e-27 Score=245.64 Aligned_cols=170 Identities=16% Similarity=0.293 Sum_probs=144.1
Q ss_pred HhcCCCcC-ceeccCCceEEEEEEEc-CCcEEEEEEccCCch--hhHHHHHHHHHHHhcCC-CCCcccccceeecCCCCC
Q 005898 481 ATNNFDMS-AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRD 555 (671)
Q Consensus 481 ~~~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~ 555 (671)
..+.|... +.||+|+||.||+|+.. +|+.||||++..... ...+++.+|+.++.+++ ||||+++++++.+.+
T Consensus 26 ~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~--- 102 (327)
T 3lm5_A 26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS--- 102 (327)
T ss_dssp HHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS---
T ss_pred hhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC---
Confidence 33445555 88999999999999965 699999999975432 23578999999999995 699999999998653
Q ss_pred CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC---CCcE
Q 005898 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIA 632 (671)
Q Consensus 556 ~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~ 632 (671)
..++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+
T Consensus 103 -----~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 103 -----EIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp -----EEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCE
T ss_pred -----eEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcE
Confidence 6899999999999999986432 34589999999999999999999997 8999999999999997 7899
Q ss_pred EEcccCCccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 633 KLSDYGLSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 633 ki~DfGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
||+|||+++... |+||+|+++|+|+++...
T Consensus 174 kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p 232 (327)
T 3lm5_A 174 KIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232 (327)
T ss_dssp EECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred EEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999985421 999999999999997553
No 272
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.93 E-value=6.7e-27 Score=253.37 Aligned_cols=167 Identities=20% Similarity=0.367 Sum_probs=131.1
Q ss_pred CCc-CceeccCCceEEEEEEEc---CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 485 FDM-SAIMGEGSYGKLYKGRLE---NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 485 f~~-~~~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
|+. .++||+|+||.||+|+.. +++.||||++..... .+.+.+|+++|++++|||||++++++.+..+ .
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~------~ 93 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHAD------R 93 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTT------T
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCC------C
Confidence 443 568999999999999965 578999999975432 2468899999999999999999999965331 3
Q ss_pred eEEEEEecCCCCChhhhhhcC------CCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee----cCCC
Q 005898 561 KVFLVYEFMSNGNFRTHISEN------TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL----NEHR 630 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl----~~~~ 630 (671)
..++||||+++ +|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 78999999974 888777531 1123489999999999999999999997 79999999999999 7789
Q ss_pred cEEEcccCCccccc----------------------------------cccccceeeeeeehhhhcc
Q 005898 631 IAKLSDYGLSIVSE----------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 631 ~~ki~DfGla~~~~----------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
.+||+|||+|+... |+||+||++|+|+++....
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 236 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCC
Confidence 99999999985311 9999999999999976443
No 273
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.93 E-value=7.9e-27 Score=246.47 Aligned_cols=171 Identities=22% Similarity=0.406 Sum_probs=141.7
Q ss_pred HhcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCc-hhhHHHHHHHHHH-HhcCCCCCcccccceeecCCCCCCc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDL-LAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
..++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+++..|+.+ ++.++||||+++++++.+.+
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~----- 123 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG----- 123 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS-----
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC-----
Confidence 346788889999999999999996 479999999997542 2334556666655 78889999999999998753
Q ss_pred ccceEEEEEecCCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++||||+++ +|.+++... .....+++..+..++.|+++||+|||+.. +|+||||||+||+++.++.+||+|
T Consensus 124 ---~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~D 197 (340)
T 3an0_A 124 ---DVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCD 197 (340)
T ss_dssp ---CEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECC
T ss_pred ---cEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEee
Confidence 68999999975 998888642 12345999999999999999999999742 699999999999999999999999
Q ss_pred cCCcccc---------------------------------ccccccceeeeeeehhhhc
Q 005898 637 YGLSIVS---------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~---------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
||+++.. .|+||+||++|+|+++...
T Consensus 198 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p 256 (340)
T 3an0_A 198 FGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256 (340)
T ss_dssp CSHHHHHSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCS
T ss_pred CCCceecccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9987421 1999999999999998643
No 274
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.93 E-value=1e-26 Score=242.60 Aligned_cols=167 Identities=27% Similarity=0.430 Sum_probs=140.8
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
..+.|+..+.||+|+||.||+|+.. +|+.||||.+.... ..+++.+|++++.+++||||+++++++.+.+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 97 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT------- 97 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-------
Confidence 4567889999999999999999975 68999999997543 2467899999999999999999999998653
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
..++||||+++|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 98 -~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 98 -DLWIVMEYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp -EEEEEEECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred -EEEEEeecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 6899999999999999987422 3489999999999999999999987 899999999999999999999999999
Q ss_pred cccc------------------------------ccccccceeeeeeehhhhc
Q 005898 640 SIVS------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+... .|+||+|+++|+|+++...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 224 (314)
T 3com_A 172 AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224 (314)
T ss_dssp CEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred chhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCC
Confidence 8432 1999999999999997543
No 275
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.93 E-value=8.2e-27 Score=240.26 Aligned_cols=171 Identities=22% Similarity=0.333 Sum_probs=135.8
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.++...++.++||||+++++++.+.+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~------ 79 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG------ 79 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC------
Confidence 35688899999999999999996 479999999997542 222334555566688899999999999998653
Q ss_pred cceEEEEEecCCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 559 VNKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||++ |+|.+++... .....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+||
T Consensus 80 --~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Df 154 (290)
T 3fme_A 80 --DVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDF 154 (290)
T ss_dssp --SEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC
T ss_pred --CEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeec
Confidence 6899999997 5888877541 1234599999999999999999999985 26899999999999999999999999
Q ss_pred CCcccc---------------------------------ccccccceeeeeeehhhhcc
Q 005898 638 GLSIVS---------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 638 Gla~~~---------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
|+++.. .|+||+||++|+|+++....
T Consensus 155 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 213 (290)
T 3fme_A 155 GISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 213 (290)
T ss_dssp ---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSS
T ss_pred CCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 987431 19999999999999986543
No 276
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.93 E-value=1.5e-26 Score=247.50 Aligned_cols=170 Identities=21% Similarity=0.329 Sum_probs=142.3
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.+.|...+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+.++++++||||+++++++...+... .
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR--N 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST--T
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc--c
Confidence 356888899999999999999865 7999999999753 2334578899999999999999999999998654210 1
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
....++||||+. |+|.+++.. .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 123499999998 688887742 389999999999999999999997 89999999999999999999999999
Q ss_pred Cccccc----------------------------cccccceeeeeeehhhhc
Q 005898 639 LSIVSE----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 639 la~~~~----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+++..+ |+||+||++|+|++|...
T Consensus 190 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p 241 (371)
T 4exu_A 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL 241 (371)
T ss_dssp CC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred cccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCC
Confidence 985321 999999999999997653
No 277
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.93 E-value=3.5e-27 Score=252.46 Aligned_cols=174 Identities=13% Similarity=0.131 Sum_probs=128.0
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc---hhhHHHHHHH---HHHHhcCCCCCccccc-------ce
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLR---LDLLAKLRHPHLVCLL-------GH 547 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E---~~~l~~l~H~niv~l~-------g~ 547 (671)
...|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+| ++.|+. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 345888899999999999999965 78999999997643 2345667788 455666 799988754 33
Q ss_pred eecCCCC---------CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHH------HHHHHHHHHHHHHhcCCCCC
Q 005898 548 CIDGGGR---------DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSER------LAVLIGVAKAVQFLHTGVIP 612 (671)
Q Consensus 548 ~~~~~~~---------~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~gl~yLH~~~~~ 612 (671)
+...+.. +.+.....++|||||+ |+|.+++.... ..+.+..+ ..++.|+++||+|||+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 3332210 0011135899999999 89999997632 12456666 88889999999999987
Q ss_pred CccccCCCCCceeecCCCcEEEcccCCccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 613 GFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 613 ~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+|+||||||+|||+++++.+||+|||+|+..+ |+||+||++|+|++|...
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 79999999999999999999999999985422 999999999999997654
No 278
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.93 E-value=4.6e-27 Score=248.97 Aligned_cols=170 Identities=16% Similarity=0.226 Sum_probs=136.6
Q ss_pred cCCCcCceeccCCceEEEEEEEc----CCcEEEEEEccCCchh-----------hHHHHHHHHHHHhcCCCCCcccccce
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSKKY-----------TVRNLKLRLDLLAKLRHPHLVCLLGH 547 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~g~ 547 (671)
++|+..+.||+|+||.||+|+.. ++..||||+....... ..+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999974 5788999998754321 12346788899999999999999999
Q ss_pred eecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec
Q 005898 548 CIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN 627 (671)
Q Consensus 548 ~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~ 627 (671)
+.+... .....++||||+ +|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++
T Consensus 117 ~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 117 GLTEFK----GRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEESS----SCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred cccccC----CCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEc
Confidence 876311 113789999999 999999997643 599999999999999999999987 899999999999999
Q ss_pred CCC--cEEEcccCCcccc-------------------------------------ccccccceeeeeeehhhhcc
Q 005898 628 EHR--IAKLSDYGLSIVS-------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 628 ~~~--~~ki~DfGla~~~-------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
.++ .+||+|||+++.. .|+||+||++|+|+++....
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf 260 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPW 260 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 887 9999999999532 19999999999999976443
No 279
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.93 E-value=1.4e-26 Score=265.17 Aligned_cols=164 Identities=21% Similarity=0.404 Sum_probs=142.7
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc----CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 555 (671)
..+.|+..+.||+|+||.||+|+.. .+..||||++.... ....+.+.+|+.+|++++|||||++++++.+.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---- 463 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---- 463 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----
Confidence 3466888899999999999999864 24679999987543 34457899999999999999999999998542
Q ss_pred CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEc
Q 005898 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (671)
Q Consensus 556 ~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~ 635 (671)
..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 464 -----~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 464 -----PVWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp -----SCEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred -----ceEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEE
Confidence 4799999999999999998643 3489999999999999999999997 89999999999999999999999
Q ss_pred ccCCccccc-------------------------------cccccceeeeeeeh
Q 005898 636 DYGLSIVSE-------------------------------DINSVGVRLLILMS 658 (671)
Q Consensus 636 DfGla~~~~-------------------------------d~~s~g~~l~~~~~ 658 (671)
|||+++... |+||+||++|||++
T Consensus 534 DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 587 (656)
T 2j0j_A 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587 (656)
T ss_dssp CCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred ecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHH
Confidence 999986421 99999999999997
No 280
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.93 E-value=1.3e-26 Score=246.77 Aligned_cols=181 Identities=23% Similarity=0.269 Sum_probs=134.2
Q ss_pred HHHHHHhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCC
Q 005898 476 EELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 476 ~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 554 (671)
++.....++|+..+.||+|+||.||+|+.. +|+.||||++..... ..+.+.+|++.++.++||||+++++++...+..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445567789999999999999999999975 689999999865432 234567788888999999999999998764321
Q ss_pred CCcccceEEEEEecCCCCChhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHhc--CCCCCCccccCCCCCceeecC-CC
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISE-NTPGKVLNWSERLAVLIGVAKAVQFLH--TGVIPGFFNNRVKTNNILLNE-HR 630 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~gl~yLH--~~~~~~iiHrDlk~~NiLl~~-~~ 630 (671)
+ ......++||||+++ +|...+.. ......+++..+..++.+++.||+||| +. +|+||||||+||+++. ++
T Consensus 95 ~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 95 D-RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp C-TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred c-ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 1 112247899999986 55444432 122345899999999999999999999 54 8999999999999996 89
Q ss_pred cEEEcccCCccccc------------------------------cccccceeeeeeehhhhc
Q 005898 631 IAKLSDYGLSIVSE------------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 631 ~~ki~DfGla~~~~------------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
.+||+|||+++... |+||+||++|+|+++...
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~p 231 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPI 231 (360)
T ss_dssp EEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 99999999986421 999999999999997643
No 281
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.93 E-value=1.7e-26 Score=251.91 Aligned_cols=166 Identities=20% Similarity=0.303 Sum_probs=141.0
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcC------CCCCcccccceeecCCCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL------RHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~g~~~~~~~~ 554 (671)
...|+..++||+|+||.||+|+.. +++.||||++.... ...+++.+|++++..+ +|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 346888999999999999999865 68999999997643 3346677888887776 6779999999998653
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc--E
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI--A 632 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~--~ 632 (671)
..++||||+. |+|.+++.... ...+++..+..++.||++||+|||+. +|+||||||+|||++.++. +
T Consensus 173 ------~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 173 ------HICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp ------EEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCE
T ss_pred ------eEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcce
Confidence 7899999996 69999887643 23489999999999999999999987 8999999999999999887 9
Q ss_pred EEcccCCccccc---------------------------cccccceeeeeeehhhh
Q 005898 633 KLSDYGLSIVSE---------------------------DINSVGVRLLILMSFFF 661 (671)
Q Consensus 633 ki~DfGla~~~~---------------------------d~~s~g~~l~~~~~~~~ 661 (671)
||+|||+|+... |+||+||++|+|++|..
T Consensus 242 kL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~ 297 (429)
T 3kvw_A 242 KVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297 (429)
T ss_dssp EECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred EEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCC
Confidence 999999985321 99999999999999854
No 282
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.93 E-value=2.1e-26 Score=244.42 Aligned_cols=170 Identities=21% Similarity=0.336 Sum_probs=144.7
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... .....++.+|++++++++||||+++++++....- ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSF---ENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCS---TTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeeccccc---Ccc
Confidence 467888999999999999999975 78999999996543 3345678899999999999999999998865321 112
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
...++||||++ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 46899999997 6999988753 489999999999999999999987 899999999999999999999999998
Q ss_pred cccc-----------------------------------------ccccccceeeeeeehhhhc
Q 005898 640 SIVS-----------------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~-----------------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
++.. .|+||+||++|+|+++...
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p 222 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCC
Confidence 8521 1999999999999987643
No 283
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.93 E-value=1.4e-25 Score=246.21 Aligned_cols=235 Identities=22% Similarity=0.277 Sum_probs=192.0
Q ss_pred CcchhcccCCCCCCEEecccccccccCCccccCCCCC-------------CEEEcccCcCCCCCCccCCCCCccCEEEcc
Q 005898 108 DSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSL-------------EYLDLSSNFLFGSVPPKISTMVKLQTLILD 174 (671)
Q Consensus 108 ~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L-------------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 174 (671)
+.+|.+++++++|++|++++|.+.|.+|..++++.+| ++|++++|.+++ +|.. .++|++|+++
T Consensus 24 ~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~ 99 (454)
T 1jl5_A 24 TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLESLVAS 99 (454)
T ss_dssp ----------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCSEEECC
T ss_pred hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCCEEEcc
Confidence 6788999999999999999999999999999999875 999999999976 5542 3789999999
Q ss_pred CCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCC
Q 005898 175 DNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLP 254 (671)
Q Consensus 175 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p 254 (671)
+|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +|+++.+++|++|++++|++++ +|
T Consensus 100 ~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~~N~l~~-lp 169 (454)
T 1jl5_A 100 CNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LPELQNSSFLKIIDVDNNSLKK-LP 169 (454)
T ss_dssp SSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSC-CC
T ss_pred CCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-CcccCCCCCCCEEECCCCcCcc-cC
Confidence 999997 7754 4789999999999985 4432 2689999999999997 6789999999999999999987 77
Q ss_pred CCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccE
Q 005898 255 KLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVF 334 (671)
Q Consensus 255 ~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~ 334 (671)
..+.+|+.+++++|++++ +| .++.+++|+.|++++|++++.+. . .++|+.|++++|+++ .+|. +..+++|+.
T Consensus 170 ~~~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~-~---~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~ 241 (454)
T 1jl5_A 170 DLPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD-L---PLSLESIVAGNNILE-ELPE-LQNLPFLTT 241 (454)
T ss_dssp CCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC-C---CTTCCEEECCSSCCS-SCCC-CTTCTTCCE
T ss_pred CCcccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC-C---cCcccEEECcCCcCC-cccc-cCCCCCCCE
Confidence 777899999999999987 66 68999999999999999998543 2 258999999999998 6774 888899999
Q ss_pred EECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 335 FDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 335 l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
|++++|++++ +|.. .++++.+++++|.+++
T Consensus 242 L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 242 IYADNNLLKT-LPDL---PPSLEALNVRDNYLTD 271 (454)
T ss_dssp EECCSSCCSS-CCSC---CTTCCEEECCSSCCSC
T ss_pred EECCCCcCCc-cccc---ccccCEEECCCCcccc
Confidence 9999999985 5543 3578888888888775
No 284
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.93 E-value=4.7e-27 Score=246.55 Aligned_cols=179 Identities=23% Similarity=0.411 Sum_probs=149.2
Q ss_pred HHHHHhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCC
Q 005898 477 ELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGR 554 (671)
Q Consensus 477 ~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 554 (671)
++....+.|+..+.||+|+||.||+|+.. +|+.||||++..... ..+++.+|++++.++ +||||+++++++......
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 33445678999999999999999999974 789999999865432 346789999999998 799999999999764210
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEE
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki 634 (671)
......++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 97 --~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 97 --GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred --cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEE
Confidence 01246899999999999999997642 23588999999999999999999997 7999999999999999999999
Q ss_pred cccCCcccc-----------------------------------ccccccceeeeeeehhhhc
Q 005898 635 SDYGLSIVS-----------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 635 ~DfGla~~~-----------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
+|||++... .|+||+||++|+|+++...
T Consensus 171 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 233 (326)
T 2x7f_A 171 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233 (326)
T ss_dssp CCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCT
T ss_pred eeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCC
Confidence 999987531 2999999999999997543
No 285
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.93 E-value=2.1e-26 Score=244.64 Aligned_cols=169 Identities=21% Similarity=0.327 Sum_probs=142.5
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC--chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|...+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+.++++++||||+++++++...+.. ...
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 101 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL--RNF 101 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG--GGC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccc--ccc
Confidence 56788899999999999999965 7999999999653 233457789999999999999999999998765311 011
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
...++||||++ |+|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 24599999997 688887743 389999999999999999999997 899999999999999999999999999
Q ss_pred ccccc----------------------------cccccceeeeeeehhhhc
Q 005898 640 SIVSE----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~~----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
++..+ |+||+||++|+|++|...
T Consensus 173 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p 223 (353)
T 3coi_A 173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL 223 (353)
T ss_dssp TTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred ccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 85421 999999999999997543
No 286
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.93 E-value=4.8e-27 Score=249.53 Aligned_cols=163 Identities=18% Similarity=0.318 Sum_probs=137.5
Q ss_pred cCCCcCceeccCCceEEEEEEEc---------CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCccc----------
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE---------NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVC---------- 543 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~---------~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~---------- 543 (671)
++|+..+.||+|+||.||+|+.. +++.||||.+... +.+.+|++++++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 57888999999999999999865 3789999998754 35789999999999999998
Q ss_pred -----ccceeecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccC
Q 005898 544 -----LLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (671)
Q Consensus 544 -----l~g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrD 618 (671)
+++++...+ ...++||||+ +|+|.+++.... ...+++.++..++.|++.||+|||+. +|+|||
T Consensus 117 ~~i~~~~~~~~~~~-------~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~D 184 (352)
T 2jii_A 117 LAIPTCMGFGVHQD-------KYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGN 184 (352)
T ss_dssp CSCCCCCEEEEETT-------TEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSC
T ss_pred cCccchhhccccCC-------cEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCC
Confidence 455555422 3789999999 999999998641 23599999999999999999999997 899999
Q ss_pred CCCCceeecCCC--cEEEcccCCcccc-------------------------------------ccccccceeeeeeehh
Q 005898 619 VKTNNILLNEHR--IAKLSDYGLSIVS-------------------------------------EDINSVGVRLLILMSF 659 (671)
Q Consensus 619 lk~~NiLl~~~~--~~ki~DfGla~~~-------------------------------------~d~~s~g~~l~~~~~~ 659 (671)
|||+||++++++ .+||+|||+++.. .|+||+||++|+|+++
T Consensus 185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g 264 (352)
T 2jii_A 185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYG 264 (352)
T ss_dssp CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999998 9999999998421 1999999999999997
Q ss_pred hhc
Q 005898 660 FFG 662 (671)
Q Consensus 660 ~~~ 662 (671)
...
T Consensus 265 ~~p 267 (352)
T 2jii_A 265 FLP 267 (352)
T ss_dssp CCT
T ss_pred CCC
Confidence 543
No 287
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.93 E-value=1e-26 Score=239.70 Aligned_cols=162 Identities=21% Similarity=0.413 Sum_probs=134.0
Q ss_pred cCCCcCceeccCCceEEEEEEEc--CCc--EEEEEEccCCc---hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE--NGT--SVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~--~g~--~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 555 (671)
++|+..+.||+|+||.||+|+.. +++ .||||++.... ....+++.+|++++++++||||+++++++.+.
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 93 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---- 93 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC----
Confidence 56888999999999999999853 333 68999986532 33467899999999999999999999998764
Q ss_pred CcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEc
Q 005898 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (671)
Q Consensus 556 ~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~ 635 (671)
..++||||+++|+|.+++.... ..+++.++..++.++++||+|||+. +|+||||||+||++++++.+||+
T Consensus 94 -----~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~ 163 (291)
T 1u46_A 94 -----PMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIG 163 (291)
T ss_dssp -----SCEEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEEC
T ss_pred -----CceeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEc
Confidence 3689999999999999987532 2489999999999999999999997 89999999999999999999999
Q ss_pred ccCCcccc---------------------------------ccccccceeeeeeeh
Q 005898 636 DYGLSIVS---------------------------------EDINSVGVRLLILMS 658 (671)
Q Consensus 636 DfGla~~~---------------------------------~d~~s~g~~l~~~~~ 658 (671)
|||+++.. .|+||+|+++|+|++
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 219 (291)
T 1u46_A 164 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219 (291)
T ss_dssp CCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHh
Confidence 99987542 199999999999998
No 288
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=2.9e-26 Score=243.64 Aligned_cols=247 Identities=19% Similarity=0.182 Sum_probs=205.4
Q ss_pred cCCCccCCCcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCC
Q 005898 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (671)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (671)
+++.|...+..+..+.++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|.++
T Consensus 58 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 137 (353)
T 2z80_A 58 DLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK 137 (353)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS
T ss_pred ECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc
Confidence 45555433333447999999999999999999988999999999999999999998655555999999999999999999
Q ss_pred CCCC-cccCCCCCcCEEEccccc-CCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCC-
Q 005898 180 NTIP-NWFDSLPSLTFLSMRNNK-LAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPK- 255 (671)
Q Consensus 180 ~~~p-~~~~~l~~L~~L~L~~N~-l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~- 255 (671)
...+ ..+.++++|++|++++|+ +++..|..+..+++|+.|++++|.+++..|. +..+++|++|++++|+++...+.
T Consensus 138 ~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 217 (353)
T 2z80_A 138 TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIF 217 (353)
T ss_dssp SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHH
T ss_pred ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhh
Confidence 5433 489999999999999994 7766678899999999999999999998664 88999999999999998543222
Q ss_pred --CCCCccEEEcCCCCCCCCchhhhc---CCcccceeecccccccC----CCccccCCCCCcCeEecccCcCcccCCcc-
Q 005898 256 --LPRGLVMAFLSNNSFSGEIPKQYG---QLNQLQQLDMSFNALRG----MPPPAIFSLPNISDLNLASNKFSGSLPKN- 325 (671)
Q Consensus 256 --~~~~L~~l~l~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~g~~p~~- 325 (671)
...+|+.+++++|.+++..+..+. ....++.+++++|.+++ .+|..+..+++|+.|+|++|+++ .+|..
T Consensus 218 ~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~ 296 (353)
T 2z80_A 218 VDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGI 296 (353)
T ss_dssp HHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTT
T ss_pred hhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHH
Confidence 256899999999999986655443 45678888888888876 35667889999999999999999 56665
Q ss_pred cCCCCCccEEECcCCcCcccCC
Q 005898 326 LNCGGKLVFFDISNNKLTGGLP 347 (671)
Q Consensus 326 ~~~~~~L~~l~ls~N~l~g~~p 347 (671)
+..+++|+.|++++|.+++..|
T Consensus 297 ~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 297 FDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TTTCTTCCEEECCSSCBCCCHH
T ss_pred HhcCCCCCEEEeeCCCccCcCC
Confidence 5889999999999999998665
No 289
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.93 E-value=1.7e-26 Score=266.75 Aligned_cols=168 Identities=23% Similarity=0.335 Sum_probs=141.1
Q ss_pred cCCCcCceeccCCceEEEEEEEc--CCcEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE--NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~--~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||+++++|.+.+.. ..
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~---~~ 156 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH---GD 156 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTT---SC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCC---CC
Confidence 67889999999999999999975 68999999986543 34456789999999999999999999999875411 01
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccCC
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGl 639 (671)
...|+||||+++|+|.+++.. .++|.++..++.||++||+|||+. +|+||||||+||+++++ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 126999999999999887753 489999999999999999999997 79999999999999986 999999999
Q ss_pred ccccc-------------------------cccccceeeeeeehhhhc
Q 005898 640 SIVSE-------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 640 a~~~~-------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
++... |+||+||++|+|+++...
T Consensus 228 a~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~ 275 (681)
T 2pzi_A 228 VSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPT 275 (681)
T ss_dssp CEETTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCE
T ss_pred chhcccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCC
Confidence 86432 999999999999987544
No 290
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.93 E-value=3.9e-26 Score=235.21 Aligned_cols=167 Identities=23% Similarity=0.392 Sum_probs=144.5
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.+.|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 94 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS------ 94 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC------
Confidence 356889999999999999999975 78999999986432 234678999999999999999999999998653
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCC---CcEEEc
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH---RIAKLS 635 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~ki~ 635 (671)
..++||||+++|+|.+++.... .+++.++..++.++++||+|||+. +|+||||||+||+++.+ +.+||+
T Consensus 95 --~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~ 166 (287)
T 2wei_A 95 --SFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKII 166 (287)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred --eEEEEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEe
Confidence 6899999999999999887543 389999999999999999999997 89999999999999754 579999
Q ss_pred ccCCcccc----------------------------ccccccceeeeeeehhhhc
Q 005898 636 DYGLSIVS----------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 636 DfGla~~~----------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|||+++.. .|+||+|+++|+|+++...
T Consensus 167 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p 221 (287)
T 2wei_A 167 DFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPP 221 (287)
T ss_dssp STTGGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCcceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCC
Confidence 99988532 1999999999999997543
No 291
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.8e-27 Score=249.13 Aligned_cols=237 Identities=23% Similarity=0.234 Sum_probs=176.4
Q ss_pred hcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCC
Q 005898 112 TTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPS 191 (671)
Q Consensus 112 ~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 191 (671)
..+..+++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|.+++. | ..++
T Consensus 28 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-~----~~~~ 100 (317)
T 3o53_A 28 SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPS 100 (317)
T ss_dssp HHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-E----ECTT
T ss_pred HHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-c----CCCC
Confidence 344566788999999998888877888899999999999998876554 88888899999998888743 2 3478
Q ss_pred cCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccC-CCCCCCCCCEEECCCCCCCCCCCCC----CCCccEEEcC
Q 005898 192 LTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPKL----PRGLVMAFLS 266 (671)
Q Consensus 192 L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~L~~l~l~ 266 (671)
|++|++++|++++..+.. +++|+.|++++|.+++..+ .+..+++|++|++++|++++..+.. ...|+.++++
T Consensus 101 L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~ 177 (317)
T 3o53_A 101 IETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177 (317)
T ss_dssp CCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECT
T ss_pred cCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECC
Confidence 888888888888654433 5778888888888887766 4677888888888888887654431 3567777777
Q ss_pred CCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCc-cc
Q 005898 267 NNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLT-GG 345 (671)
Q Consensus 267 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~-g~ 345 (671)
+|.+++. |. ...+++|+.|++++|++++.++. +..+++|+.|+|++|+++ .+|..+..+++|+.|++++|.++ +.
T Consensus 178 ~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~ 253 (317)
T 3o53_A 178 YNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGT 253 (317)
T ss_dssp TSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHH
T ss_pred CCcCccc-cc-ccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcC
Confidence 7777654 32 23477777777777777776654 677777777777777777 46666777777777777777777 66
Q ss_pred CCCCCCCCCCCceeccC
Q 005898 346 LPSCLSNESDKRVVKFR 362 (671)
Q Consensus 346 ~p~~~~~~~~l~~l~l~ 362 (671)
+|.++..++.++.+++.
T Consensus 254 ~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 254 LRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp HHHHHHTCHHHHHHHHH
T ss_pred HHHHHhccccceEEECC
Confidence 66666666666666665
No 292
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=3.8e-25 Score=226.56 Aligned_cols=206 Identities=25% Similarity=0.226 Sum_probs=143.5
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
++|++|+|++|.+.+..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 36888888888888777778888888888888888887767777888888888888888888777777888888888888
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccc-cC-CCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCch
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGS-LP-DLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIP 275 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~-~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p 275 (671)
++|++++..+..+..+++|+.|++++|.+++. +| .+..+++|+.|++++|++++ ..+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~---------------------~~~ 166 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS---------------------IYC 166 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE---------------------ECG
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc---------------------CCH
Confidence 88888766666677777777777777777652 23 36666677777666665543 223
Q ss_pred hhhcCCcccc----eeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCccc
Q 005898 276 KQYGQLNQLQ----QLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGG 345 (671)
Q Consensus 276 ~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~ 345 (671)
..+..+++|+ .|++++|.+++.++..+. ..+|+.|+|++|++++..+..+..+++|+.|++++|.+++.
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 3444444444 566666666666554333 33566666666666655444556666666666666666543
No 293
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.93 E-value=2.6e-26 Score=237.05 Aligned_cols=168 Identities=18% Similarity=0.329 Sum_probs=139.8
Q ss_pred HhcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
..++|+..+.||+|+||.||+|+. .+++.||||++..... .+++.+|++++..++|++++..+++|...+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~------- 77 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEG------- 77 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEET-------
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCC-------
Confidence 446799999999999999999996 5789999998754332 235888999999999999998888776533
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee---cCCCcEEEcc
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLSD 636 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~ki~D 636 (671)
+..++||||+ +|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|
T Consensus 78 ~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 78 DYNVMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred CceEEEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEec
Confidence 3679999999 999999987532 2499999999999999999999997 89999999999999 7889999999
Q ss_pred cCCcccc-------------------------------------ccccccceeeeeeehhhhcc
Q 005898 637 YGLSIVS-------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 637 fGla~~~-------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
||+++.. .|+||+||++|+|+++....
T Consensus 152 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 215 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215 (296)
T ss_dssp CTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred CccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCC
Confidence 9998531 19999999999999986543
No 294
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.93 E-value=8.5e-27 Score=243.07 Aligned_cols=168 Identities=23% Similarity=0.370 Sum_probs=137.3
Q ss_pred HHhcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCch------hhHHHHHHHHHHHhcC----CCCCccccccee
Q 005898 480 EATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKL----RHPHLVCLLGHC 548 (671)
Q Consensus 480 ~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l----~H~niv~l~g~~ 548 (671)
...++|+..+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3456799999999999999999986 4789999999965432 1233466788888888 899999999998
Q ss_pred ecCCCCCCcccceEEEEEec-CCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec
Q 005898 549 IDGGGRDDYAVNKVFLVYEF-MSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN 627 (671)
Q Consensus 549 ~~~~~~~~~~~~~~~Lv~Ey-~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~ 627 (671)
.+.+ ..++|||| +++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 108 ~~~~--------~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 173 (312)
T 2iwi_A 108 ETQE--------GFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILID 173 (312)
T ss_dssp -------------CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEE
T ss_pred ecCC--------eEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEe
Confidence 7653 57999999 78999999998643 389999999999999999999987 899999999999999
Q ss_pred -CCCcEEEcccCCcccc-----------------------------ccccccceeeeeeehhhh
Q 005898 628 -EHRIAKLSDYGLSIVS-----------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 628 -~~~~~ki~DfGla~~~-----------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
+++.+||+|||+++.. .|+||+|+++|+|+++..
T Consensus 174 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~ 237 (312)
T 2iwi_A 174 LRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDI 237 (312)
T ss_dssp TTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCC
Confidence 8899999999997542 299999999999999754
No 295
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.93 E-value=3.2e-26 Score=240.05 Aligned_cols=173 Identities=24% Similarity=0.368 Sum_probs=140.5
Q ss_pred HhcCCCcCceeccCCceEEEEEEE--cCCcEEEEEEccCCch--hhHHHHHHHHHHHhcC---CCCCcccccceeecCCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRL--ENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKL---RHPHLVCLLGHCIDGGG 553 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~--~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~ 553 (671)
+.++|+..+.||+|+||.||+|+. .+|+.||||++..... .....+.+|+++++.+ +||||++++++|.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 4688999999864321 1123456677666555 89999999999873210
Q ss_pred CCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEE
Q 005898 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAK 633 (671)
Q Consensus 554 ~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~k 633 (671)
. .....++||||++ |+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 89 ~---~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 89 D---RETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp S---SEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred C---CCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEE
Confidence 0 1236899999998 69999987643 23489999999999999999999997 899999999999999999999
Q ss_pred EcccCCccccc-----------------------------cccccceeeeeeehhhh
Q 005898 634 LSDYGLSIVSE-----------------------------DINSVGVRLLILMSFFF 661 (671)
Q Consensus 634 i~DfGla~~~~-----------------------------d~~s~g~~l~~~~~~~~ 661 (671)
|+|||+++... |+||+||++|+|+++..
T Consensus 161 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 217 (326)
T 1blx_A 161 LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217 (326)
T ss_dssp ECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred EecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCC
Confidence 99999985421 99999999999998754
No 296
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.93 E-value=4.4e-26 Score=235.47 Aligned_cols=166 Identities=19% Similarity=0.339 Sum_probs=142.0
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... .+++.+|+++++.++|++++..++++...+ .
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-------~ 78 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEG-------D 78 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEET-------T
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCC-------C
Confidence 46788899999999999999996 5799999999865433 246889999999999999888887775533 3
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee---cCCCcEEEccc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLSDY 637 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~ki~Df 637 (671)
..++||||+ +|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++ ++++.+||+||
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 79 YNVMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred ceEEEEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 679999999 899999997532 3499999999999999999999997 89999999999999 58899999999
Q ss_pred CCcccc-------------------------------------ccccccceeeeeeehhhhc
Q 005898 638 GLSIVS-------------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 638 Gla~~~-------------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|+++.. .|+||+||++|+|+++...
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 214 (296)
T 3uzp_A 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP 214 (296)
T ss_dssp TTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence 998531 1999999999999997554
No 297
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.92 E-value=3.5e-26 Score=246.37 Aligned_cols=173 Identities=18% Similarity=0.223 Sum_probs=141.6
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCC--------CCCcccccceeecCC
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR--------HPHLVCLLGHCIDGG 552 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~g~~~~~~ 552 (671)
.++|+..+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++ |+||+++++++...+
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367889999999999999999864 6899999999754 334567889999999886 788999999887321
Q ss_pred CCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCC--
Q 005898 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-- 630 (671)
Q Consensus 553 ~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~-- 630 (671)
. .....++||||+ +|++.+++.... ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ~----~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 115 V----NGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp T----TEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred C----CCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 0 113689999999 567766665432 235899999999999999999999853 699999999999999775
Q ss_pred -----------------------------------------------cEEEcccCCccccc-------------------
Q 005898 631 -----------------------------------------------IAKLSDYGLSIVSE------------------- 644 (671)
Q Consensus 631 -----------------------------------------------~~ki~DfGla~~~~------------------- 644 (671)
.+||+|||+++...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhc
Confidence 79999999985321
Q ss_pred --------cccccceeeeeeehhhhcc
Q 005898 645 --------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 645 --------d~~s~g~~l~~~~~~~~~~ 663 (671)
|+||+||++|+|+++....
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf 293 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLF 293 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCC
Confidence 9999999999999986543
No 298
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.2e-24 Score=222.77 Aligned_cols=215 Identities=20% Similarity=0.242 Sum_probs=185.6
Q ss_pred cCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccC
Q 005898 133 SLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQR 212 (671)
Q Consensus 133 ~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~ 212 (671)
.+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|++++|++++..|..+..
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 4565443 57999999999998877778999999999999999999877888999999999999999999888888999
Q ss_pred CCCCCEEEeccCccccccC-CCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeeccc
Q 005898 213 ISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSF 291 (671)
Q Consensus 213 l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~ 291 (671)
+++|++|++++|.+++..+ .+..+++|++|++++|++++ ..+|..++.+++|+.|++++
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--------------------~~l~~~~~~l~~L~~L~Ls~ 158 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS--------------------FKLPEYFSNLTNLEHLDLSS 158 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC--------------------CCCCGGGGGCTTCCEEECCS
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccce--------------------ecCchhhccCCCCCEEECCC
Confidence 9999999999999988766 47888999999888887653 13688899999999999999
Q ss_pred ccccCCCccccCCCCCcC----eEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCC
Q 005898 292 NALRGMPPPAIFSLPNIS----DLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (671)
Q Consensus 292 N~l~~~~~~~~~~l~~L~----~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (671)
|++++.++..+..+++|+ .|++++|++++..+..+. ..+|+.|++++|++++..+..+..+++++.+++++|.+.
T Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 159 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp SCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred CCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 999999988888777777 899999999976665554 458999999999999776667788999999999999998
Q ss_pred CCc
Q 005898 368 SNV 370 (671)
Q Consensus 368 ~~~ 370 (671)
+.+
T Consensus 238 c~c 240 (276)
T 2z62_A 238 CSC 240 (276)
T ss_dssp CCT
T ss_pred ccC
Confidence 643
No 299
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.92 E-value=6.4e-26 Score=238.63 Aligned_cols=167 Identities=21% Similarity=0.326 Sum_probs=142.6
Q ss_pred cCCCcCceeccCCceEEEEEEE--cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCC------cccccceeecCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL--ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPH------LVCLLGHCIDGGGR 554 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~~ 554 (671)
++|+..+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+++++.++|++ ++++++++.+.+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~-- 90 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG-- 90 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT--
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC--
Confidence 5788899999999999999986 368899999997543 34567889999998887765 899999987653
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC------
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE------ 628 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~------ 628 (671)
..++||||+ +|+|.+++.... ...+++.++..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 91 ------~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 159 (339)
T 1z57_A 91 ------HICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEA 159 (339)
T ss_dssp ------EEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEE
T ss_pred ------cEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccc
Confidence 789999999 889999987643 23589999999999999999999997 8999999999999987
Q ss_pred -------------CCcEEEcccCCccccc---------------------------cccccceeeeeeehhhhcc
Q 005898 629 -------------HRIAKLSDYGLSIVSE---------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 629 -------------~~~~ki~DfGla~~~~---------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
++.+||+|||+++... |+||+||++|+|+++....
T Consensus 160 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 234 (339)
T 1z57_A 160 YNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234 (339)
T ss_dssp EC----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cCCccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence 6789999999986422 9999999999999985543
No 300
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=3.8e-25 Score=226.15 Aligned_cols=210 Identities=23% Similarity=0.309 Sum_probs=162.7
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCc
Q 005898 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (671)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (671)
.+..+++|+.|++++|.+.. ++ .+..+++|++|+|++|.+++ + +.+..+++|++|+|++|.+++..|..|+++++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 34567778888888877743 33 47778888888888888765 2 467778888888888888887666777788888
Q ss_pred CEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCC
Q 005898 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFS 271 (671)
Q Consensus 193 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~ 271 (671)
++|++++|++++..|..+..+++|++|++++|.+++..+. +..+++|+.|++++|+++
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--------------------- 170 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ--------------------- 170 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC---------------------
Confidence 8888888888766666677788888888888887766654 567777777777776654
Q ss_pred CCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCC
Q 005898 272 GEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLS 351 (671)
Q Consensus 272 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~ 351 (671)
+..|..++.+++|+.|++++|++++.++..+..+++|+.|+|++|.+.+..| .|+.++++.|+++|.+|.+++
T Consensus 171 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-------~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 171 SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-------TTHHHHHHHHHTGGGBBCTTS
T ss_pred ccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-------HHHHHHHHHHhCCCcccCccc
Confidence 3445567888899999999999999998888899999999999998886544 688889999999999999887
Q ss_pred CCC
Q 005898 352 NES 354 (671)
Q Consensus 352 ~~~ 354 (671)
.+.
T Consensus 244 ~~~ 246 (272)
T 3rfs_A 244 SVA 246 (272)
T ss_dssp CBC
T ss_pred ccC
Confidence 654
No 301
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=7.1e-26 Score=236.98 Aligned_cols=236 Identities=19% Similarity=0.220 Sum_probs=204.8
Q ss_pred CCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcc
Q 005898 119 SLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMR 198 (671)
Q Consensus 119 ~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 198 (671)
.++.++++.+.+...++..+..+++|++|+|++|++++..|..|.++++|++|+|++|.+++..| +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45667788888866666677788899999999999998888899999999999999999987655 9999999999999
Q ss_pred cccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCC---CCCccEEEcCCCCCCCCch
Q 005898 199 NNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNNSFSGEIP 275 (671)
Q Consensus 199 ~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~---~~~L~~l~l~~N~l~~~~p 275 (671)
+|++++. | ..++|+.|++++|.+++..+. .+++|+.|++++|++++..|.. ..+|+.+++++|.+++..|
T Consensus 89 ~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 89 NNYVQEL-L----VGPSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SSEEEEE-E----ECTTCCEEECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred CCccccc-c----CCCCcCEEECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 9999843 2 348999999999999987654 4788999999999999876643 3679999999999998888
Q ss_pred hhh-cCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCC
Q 005898 276 KQY-GQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNES 354 (671)
Q Consensus 276 ~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~ 354 (671)
..+ ..+++|++|++++|.+++.++ ...+++|+.|+|++|++++. |..+..+++|+.|++++|+++ .+|..+..++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred HHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 777 478999999999999998843 34589999999999999965 555888999999999999999 5788899999
Q ss_pred CCceeccCCCcCC
Q 005898 355 DKRVVKFRGNCLS 367 (671)
Q Consensus 355 ~l~~l~l~~N~l~ 367 (671)
+++.+++++|.+.
T Consensus 238 ~L~~L~l~~N~~~ 250 (317)
T 3o53_A 238 NLEHFDLRGNGFH 250 (317)
T ss_dssp TCCEEECTTCCCB
T ss_pred CCCEEEccCCCcc
Confidence 9999999999886
No 302
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=8e-25 Score=248.00 Aligned_cols=284 Identities=27% Similarity=0.315 Sum_probs=207.1
Q ss_pred CCccCCCCCCCCCCCC---CccceEeCCCCEeEEEecCCCCCCCCCCCCcccccccCCCccCCCcchhcccCCCCCCEEe
Q 005898 48 EIWINHGADFCYISSS---TQVNITCQDNFITELKIIGDKPSNVGNFDGFASANASLSENFSIDSFVTTLARLTSLRVLS 124 (671)
Q Consensus 48 ~~W~~~~~~~C~~~~~---~~~~v~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~~l~~l~~L~~L~ 124 (671)
+.|... .++|.|.+. .+....|....++.+++.+..+......-........++.|. +..+|. .+++|++|+
T Consensus 13 ~~W~~~-~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~~lp~~l~~~L~~L~L~~N~-l~~lp~---~l~~L~~L~ 87 (622)
T 3g06_A 13 SAWRRA-APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNN-LTSLPA---LPPELRTLE 87 (622)
T ss_dssp HHHHHT-CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCSCCCSCCCTTCSEEEECSCC-CSCCCC---CCTTCCEEE
T ss_pred HHHHhc-CCcchhccccccCcccccccCCCCcEEEecCCCcCccChhhCCCCcEEEecCCC-CCCCCC---cCCCCCEEE
Confidence 457654 577877421 001133444457778877665442211000111122344443 234554 567888888
Q ss_pred cccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCC
Q 005898 125 LVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAG 204 (671)
Q Consensus 125 L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g 204 (671)
|++|.++ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|++++ +|.. +++|++|++++|++++
T Consensus 88 Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 88 VSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS 155 (622)
T ss_dssp ECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred cCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC
Confidence 8888886 4565 67888888888888875 454 56788888888888875 5653 4788888888888874
Q ss_pred CCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCccc
Q 005898 205 PFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQL 284 (671)
Q Consensus 205 ~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L 284 (671)
+|.. +++|+.|++++|.+++ +| ..+++|+.|++++|++++ +|..+.+|..+++++|.++ .+|. .+++|
T Consensus 156 -l~~~---~~~L~~L~L~~N~l~~-l~--~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~-~l~~---~~~~L 223 (622)
T 3g06_A 156 -LPAL---PSELCKLWAYNNQLTS-LP--MLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLT-SLPA---LPSGL 223 (622)
T ss_dssp -CCCC---CTTCCEEECCSSCCSC-CC--CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS-SCCC---CCTTC
T ss_pred -cCCc---cCCCCEEECCCCCCCC-Cc--ccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCccc-ccCC---CCCCC
Confidence 5543 4678888888888886 44 457899999999999986 6667788999999999998 4554 34789
Q ss_pred ceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCC
Q 005898 285 QQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGN 364 (671)
Q Consensus 285 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N 364 (671)
+.|++++|++++.+ ..+++|+.|+|++|+++ .+|. .+++|+.|+|++|+++ .+|..+..+++++.+++++|
T Consensus 224 ~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N 294 (622)
T 3g06_A 224 KELIVSGNRLTSLP----VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGN 294 (622)
T ss_dssp CEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSC
T ss_pred CEEEccCCccCcCC----CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCC
Confidence 99999999999865 45689999999999998 5666 5678999999999999 88999999999999999999
Q ss_pred cCCCC
Q 005898 365 CLSSN 369 (671)
Q Consensus 365 ~l~~~ 369 (671)
.+++.
T Consensus 295 ~l~~~ 299 (622)
T 3g06_A 295 PLSER 299 (622)
T ss_dssp CCCHH
T ss_pred CCCCc
Confidence 98864
No 303
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.92 E-value=1.2e-25 Score=235.98 Aligned_cols=169 Identities=23% Similarity=0.348 Sum_probs=139.5
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCc-hhhHHHHHHHHH-HHhcCCCCCcccccceeecCCCCCCccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLD-LLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+++.+|+. +++.++||||+++++++.+.+
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~------- 94 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG------- 94 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS-------
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC-------
Confidence 57888899999999999999975 78999999997543 333455666666 778889999999999998753
Q ss_pred ceEEEEEecCCCCChhhhhhc--CCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 560 NKVFLVYEFMSNGNFRTHISE--NTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++ +|.+++.. ......+++..+..++.++++||+|||+. ++|+||||||+||+++.++.+||+||
T Consensus 95 -~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Df 170 (327)
T 3aln_A 95 -DCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDF 170 (327)
T ss_dssp -EEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCC
T ss_pred -ceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccC
Confidence 68999999985 88777653 11234589999999999999999999985 26899999999999999999999999
Q ss_pred CCcccc---------------------------------ccccccceeeeeeehhhhc
Q 005898 638 GLSIVS---------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 638 Gla~~~---------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
|+++.. .|+||+|+++|+|+++...
T Consensus 171 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 228 (327)
T 3aln_A 171 GISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228 (327)
T ss_dssp SSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCC
T ss_pred CCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 998531 1999999999999997543
No 304
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.4e-25 Score=248.68 Aligned_cols=193 Identities=24% Similarity=0.251 Sum_probs=135.8
Q ss_pred CCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEec
Q 005898 143 SLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLS 222 (671)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls 222 (671)
+|++|+|++|.+++..|..|..+++|++|+|++|.+++..| ++.+++|++|+|++|.+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l-------------------- 92 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV-------------------- 92 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEE--------------------
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcC--------------------
Confidence 55555555555555444555555555555555555544333 44455555555555544
Q ss_pred cCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCcccc
Q 005898 223 KNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAI 302 (671)
Q Consensus 223 ~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 302 (671)
++..+. ++|+.|++++|.+++..+....+|+.|++++|.+++..|..++.+++|+.|+|++|.+++.+|..+
T Consensus 93 ----~~l~~~----~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 164 (487)
T 3oja_A 93 ----QELLVG----PSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164 (487)
T ss_dssp ----EEEEEC----TTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred ----CCCCCC----CCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHH
Confidence 433221 455555555555555444444556666677777777788889999999999999999999988888
Q ss_pred C-CCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 303 F-SLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 303 ~-~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
. .+++|+.|+|++|.+++..+ ...+++|+.|+|++|.+++..| .+..+++++.+++++|.+++
T Consensus 165 ~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 165 AASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp GGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE
T ss_pred hhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc
Confidence 6 79999999999999997733 3358999999999999997544 58889999999999999985
No 305
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.6e-24 Score=219.76 Aligned_cols=181 Identities=26% Similarity=0.310 Sum_probs=97.2
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
++|+.|+|++|.+.+..+..|.++++|++|+|++|+++...+..|.++++|++|+|++|.+++..+..|.++++|++|++
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 35666666666665555556666666666666666665444444556666666666666666544455566666666666
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchh
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPK 276 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~ 276 (671)
++|++++..|..|..+++|+.|+|++|.+++..+. +..+++|+.|++++|++++ ..+.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------~~~~ 175 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR---------------------VPEG 175 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC---------------------CCTT
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE---------------------eChh
Confidence 66666555455555555555555555555544333 3444555554444443332 2222
Q ss_pred hhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCc
Q 005898 277 QYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (671)
Q Consensus 277 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (671)
.|..+++|+.|++++|++++.++..+..+++|+.|+|++|.+.
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 176 AFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred HhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 3444445555555555555444444444444444444444443
No 306
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.92 E-value=9.6e-26 Score=248.74 Aligned_cols=167 Identities=20% Similarity=0.303 Sum_probs=138.3
Q ss_pred hcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
.++|+..++||+|+||.||+|+. .+++.||||++..... .+++.+|++++..++|++.+..+.++.... +
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~-------~ 76 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEG-------D 76 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEET-------T
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeC-------C
Confidence 35788999999999999999996 5799999998865433 235788999999998865555544443322 3
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee---cCCCcEEEccc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLSDY 637 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~ki~Df 637 (671)
..++||||+ +|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+|||+ ++++.+||+||
T Consensus 77 ~~~lvme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 77 YNVLVMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEEEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeC
Confidence 679999999 999999997532 3499999999999999999999997 89999999999999 68899999999
Q ss_pred CCccccc-------------------------------------cccccceeeeeeehhhhcc
Q 005898 638 GLSIVSE-------------------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 638 Gla~~~~-------------------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
|+++... |+||+||++|||+++....
T Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf 213 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 213 (483)
T ss_dssp TTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred CcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 9985311 9999999999999975543
No 307
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.92 E-value=3.3e-26 Score=258.46 Aligned_cols=176 Identities=19% Similarity=0.252 Sum_probs=146.2
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCC-chhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 560 (671)
++|+..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++|||||++++++...... ...+
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~--~~~~ 91 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL--APND 91 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCC--CTTS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccc--cCCC
Confidence 57999999999999999999864 6899999998754 344567899999999999999999999987652110 0124
Q ss_pred eEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCc---EEEccc
Q 005898 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI---AKLSDY 637 (671)
Q Consensus 561 ~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~ki~Df 637 (671)
..++||||+++|+|.+++........+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 6799999999999999998755445689999999999999999999997 8999999999999997654 999999
Q ss_pred CCccccc-----------------------------cccccceeeeeeehhhhcc
Q 005898 638 GLSIVSE-----------------------------DINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 638 Gla~~~~-----------------------------d~~s~g~~l~~~~~~~~~~ 663 (671)
|+++... |+||+||++|+|++|....
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf 223 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSC
T ss_pred ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCC
Confidence 9986521 9999999999999985543
No 308
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.92 E-value=3.3e-26 Score=241.45 Aligned_cols=154 Identities=19% Similarity=0.300 Sum_probs=120.1
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCc--------hhhHHHHHHHHHHHhcCC---------CCCccccc
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--------KYTVRNLKLRLDLLAKLR---------HPHLVCLL 545 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~~~~E~~~l~~l~---------H~niv~l~ 545 (671)
++|+..+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4577889999999999999987 68999999996432 223477899999998886 55555555
Q ss_pred c-----------------eeecCCCC-----CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 005898 546 G-----------------HCIDGGGR-----DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAV 603 (671)
Q Consensus 546 g-----------------~~~~~~~~-----~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl 603 (671)
+ ++.+..+. +.......++||||+++|++.+.+.+ ..+++.+...++.||+.||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHH
Confidence 4 44321000 00012478999999999977666643 3489999999999999999
Q ss_pred HHhc-CCCCCCccccCCCCCceeecCCC--------------------cEEEcccCCccccc
Q 005898 604 QFLH-TGVIPGFFNNRVKTNNILLNEHR--------------------IAKLSDYGLSIVSE 644 (671)
Q Consensus 604 ~yLH-~~~~~~iiHrDlk~~NiLl~~~~--------------------~~ki~DfGla~~~~ 644 (671)
+||| +. +|+||||||+|||++.++ .+||+|||+|+...
T Consensus 175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~ 233 (336)
T 2vuw_A 175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER 233 (336)
T ss_dssp HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE
T ss_pred HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC
Confidence 9999 66 799999999999999887 99999999997643
No 309
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.92 E-value=1.8e-25 Score=240.23 Aligned_cols=170 Identities=22% Similarity=0.293 Sum_probs=141.4
Q ss_pred HhcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCC-CCC-----cccccceeecCCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPH-----LVCLLGHCIDGGG 553 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~n-----iv~l~g~~~~~~~ 553 (671)
..++|+..+.||+|+||+||+|+.. +++.||||++.... ...+++.+|++++..++ |++ |+++++++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~- 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN- 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT-
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC-
Confidence 3568999999999999999999865 68899999997543 33567888988888885 554 899999887653
Q ss_pred CCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec--CCCc
Q 005898 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN--EHRI 631 (671)
Q Consensus 554 ~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~--~~~~ 631 (671)
..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||.+. .+|+||||||+|||++ +++.
T Consensus 130 -------~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 130 -------HLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp -------EEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCC
T ss_pred -------ceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCc
Confidence 7899999996 59999987643 234899999999999999999999632 3799999999999994 5788
Q ss_pred EEEcccCCccccc---------------------------cccccceeeeeeehhhhc
Q 005898 632 AKLSDYGLSIVSE---------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 632 ~ki~DfGla~~~~---------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+||+|||+++... |+||+||++|+|++|...
T Consensus 200 ~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p 257 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257 (382)
T ss_dssp EEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred EEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999985422 999999999999997643
No 310
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.92 E-value=1.3e-25 Score=234.34 Aligned_cols=166 Identities=19% Similarity=0.281 Sum_probs=143.6
Q ss_pred HhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCC--chhhHHHHHHHHHHHhcCC--CCCcccccceeecCCCCCC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLR--HPHLVCLLGHCIDGGGRDD 556 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~ 556 (671)
..+.|+..+.||+|+||.||+|+..+++.||||++... .....+.+.+|++++.+++ ||||+++++++.+.+
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~---- 101 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---- 101 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS----
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC----
Confidence 34678889999999999999999888999999998643 3345678999999999997 599999999998653
Q ss_pred cccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcc
Q 005898 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (671)
Q Consensus 557 ~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~D 636 (671)
..++||| +.+|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||++++ +.+||+|
T Consensus 102 ----~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~D 169 (313)
T 3cek_A 102 ----YIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLID 169 (313)
T ss_dssp ----EEEEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECC
T ss_pred ----EEEEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEee
Confidence 6899999 56889999998643 489999999999999999999997 8999999999999975 8999999
Q ss_pred cCCcccc-------------------------------------------ccccccceeeeeeehhhhc
Q 005898 637 YGLSIVS-------------------------------------------EDINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~-------------------------------------------~d~~s~g~~l~~~~~~~~~ 662 (671)
||+++.. .|+||+|+++|+|+++...
T Consensus 170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 238 (313)
T 3cek_A 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238 (313)
T ss_dssp CSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred ccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCc
Confidence 9998531 2999999999999987653
No 311
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.92 E-value=3.8e-26 Score=239.36 Aligned_cols=168 Identities=20% Similarity=0.316 Sum_probs=143.0
Q ss_pred HhcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCch------hhHHHHHHHHHHHhcCC--CCCcccccceeecC
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKLR--HPHLVCLLGHCIDG 551 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~ 551 (671)
..++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++ ||||+++++++.+.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 356788999999999999999985 4789999999864321 12245778999999996 59999999999865
Q ss_pred CCCCCcccceEEEEEecCCC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec-CC
Q 005898 552 GGRDDYAVNKVFLVYEFMSN-GNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EH 629 (671)
Q Consensus 552 ~~~~~~~~~~~~Lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~-~~ 629 (671)
+ ..++||||+.+ |+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ ++
T Consensus 121 ~--------~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 186 (320)
T 3a99_A 121 D--------SFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNR 186 (320)
T ss_dssp S--------EEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTT
T ss_pred C--------cEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCC
Confidence 3 68999999986 89999997643 489999999999999999999987 899999999999999 78
Q ss_pred CcEEEcccCCccccc-----------------------------cccccceeeeeeehhhhc
Q 005898 630 RIAKLSDYGLSIVSE-----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 630 ~~~ki~DfGla~~~~-----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+.+||+|||+++... |+||+|+++|+|+++...
T Consensus 187 ~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p 248 (320)
T 3a99_A 187 GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248 (320)
T ss_dssp TEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCC
Confidence 999999999885321 999999999999997543
No 312
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.92 E-value=1.7e-25 Score=236.00 Aligned_cols=169 Identities=25% Similarity=0.406 Sum_probs=135.9
Q ss_pred hcCCCcC-ceeccCCceEEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCccc
Q 005898 482 TNNFDMS-AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 482 ~~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 559 (671)
.++|... ++||+|+||.||+|+.. +|+.||||++..... .. .+....+..++||||+++++++..... ..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~----~~ 98 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-AR---QEVDHHWQASGGPHIVCILDVYENMHH----GK 98 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH-HH---HHHHHHHHHTTSTTBCCEEEEEEEEET----TE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-HH---HHHHHHHHhcCCCChHHHHHHHhhccC----CC
Confidence 4567774 56999999999999976 799999999975422 11 222334567799999999999875221 11
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecC---CCcEEEcc
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAKLSD 636 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~ki~D 636 (671)
...++||||+++|+|.+++.... ...+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 35899999999999999998643 24599999999999999999999997 8999999999999976 45699999
Q ss_pred cCCccccc----------------------------cccccceeeeeeehhhhc
Q 005898 637 YGLSIVSE----------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 637 fGla~~~~----------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
||+++... |+||+||++|+|+++...
T Consensus 175 fg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 228 (336)
T 3fhr_A 175 FGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228 (336)
T ss_dssp CTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 99985421 999999999999997654
No 313
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.92 E-value=3.2e-26 Score=239.36 Aligned_cols=166 Identities=19% Similarity=0.427 Sum_probs=139.9
Q ss_pred HHhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 480 EATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 480 ~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
...++|+..+.||+|+||.||+|+... .||||++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 102 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP----- 102 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS-----
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-----
Confidence 345678899999999999999998753 49999986432 223456888999999999999999999998753
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++ ++.+||+||
T Consensus 103 ---~~~iv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Df 173 (319)
T 2y4i_B 103 ---HLAIITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDF 173 (319)
T ss_dssp ---CEEEECBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCC
T ss_pred ---ceEEEeecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeec
Confidence 6899999999999999997643 3589999999999999999999997 899999999999998 679999999
Q ss_pred CCcccc--------------------------------------------ccccccceeeeeeehhhh
Q 005898 638 GLSIVS--------------------------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 638 Gla~~~--------------------------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
|+++.. .|+||+|+++|+|+++..
T Consensus 174 g~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 241 (319)
T 2y4i_B 174 GLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREW 241 (319)
T ss_dssp SCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCC
Confidence 975321 299999999999999754
No 314
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.8e-23 Score=213.43 Aligned_cols=201 Identities=24% Similarity=0.310 Sum_probs=148.3
Q ss_pred CCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEccc
Q 005898 120 LRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRN 199 (671)
Q Consensus 120 L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (671)
++.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...+..|.++++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 457888888886 4666554 6789999999999876667888899999999999988866556678888888888888
Q ss_pred ccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhh
Q 005898 200 NKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQY 278 (671)
Q Consensus 200 N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~ 278 (671)
|++++..+..+..+++|+.|++++|.+++..+. +..+++|++|+|++|++++ ..+..|
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~---------------------~~~~~~ 153 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS---------------------LPKGVF 153 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------CCTTTT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCc---------------------cCHhHc
Confidence 888866666677888888888888888776654 5677777777776665542 223345
Q ss_pred cCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcc
Q 005898 279 GQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTG 344 (671)
Q Consensus 279 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g 344 (671)
..+++|+.|++++|++++.++..+..+++|+.|+|++|++++..+..+..+++|+.|++++|.+.+
T Consensus 154 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 154 DKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 667777777777777777777667777777777777777775555556666667777777666653
No 315
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.91 E-value=3.9e-25 Score=234.31 Aligned_cols=166 Identities=19% Similarity=0.332 Sum_probs=139.6
Q ss_pred cCCCcCceeccCCceEEEEEEEc-CC-cEEEEEEccCCchhhHHHHHHHHHHHhcCCCCC------cccccceeecCCCC
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLE-NG-TSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPH------LVCLLGHCIDGGGR 554 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~~ 554 (671)
++|+..+.||+|+||+||+|+.. ++ +.||||++.... ...+.+.+|++++++++|++ ++.+++++...+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-- 95 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG-- 95 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT--
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC--
Confidence 57888999999999999999864 44 789999997543 34567889999999998776 888888887653
Q ss_pred CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceee--------
Q 005898 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL-------- 626 (671)
Q Consensus 555 ~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl-------- 626 (671)
..++||||+ +|++.+++.... ...+++.++..++.|+++||+|||+. +|+||||||+||++
T Consensus 96 ------~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 164 (355)
T 2eu9_A 96 ------HMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETL 164 (355)
T ss_dssp ------EEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEE
T ss_pred ------eEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccc
Confidence 789999999 667777776543 23589999999999999999999987 89999999999999
Q ss_pred -----------cCCCcEEEcccCCccccc---------------------------cccccceeeeeeehhhhc
Q 005898 627 -----------NEHRIAKLSDYGLSIVSE---------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 627 -----------~~~~~~ki~DfGla~~~~---------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
+.++.+||+|||+++... |+||+||++|+|+++...
T Consensus 165 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 238 (355)
T 2eu9_A 165 YNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTL 238 (355)
T ss_dssp ECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCC
Confidence 678899999999986421 999999999999997554
No 316
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.91 E-value=1.4e-25 Score=244.66 Aligned_cols=164 Identities=18% Similarity=0.231 Sum_probs=132.5
Q ss_pred cCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCCcccce
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~~~~~ 561 (671)
..|+..++||+|+||+||.....+|+.||||++..... +.+.+|+++++++ +|||||++++++.+.. .
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--------~ 92 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQ--------F 92 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETT--------E
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCC--------E
Confidence 45788899999999997655556789999999865332 2356899999999 7999999999987653 6
Q ss_pred EEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec-----CCCcEEEcc
Q 005898 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-----EHRIAKLSD 636 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~-----~~~~~ki~D 636 (671)
.++||||++ |+|.+++..... ...+.++..++.||++||+|||+. +|+||||||+||+++ ....+||+|
T Consensus 93 ~~lv~E~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~D 166 (432)
T 3p23_A 93 QYIAIELCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISD 166 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECC
T ss_pred EEEEEECCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEec
Confidence 899999996 699999976432 244456678999999999999997 799999999999994 334688999
Q ss_pred cCCcccc------------------------------------ccccccceeeeeeehhhhcc
Q 005898 637 YGLSIVS------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 637 fGla~~~------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
||+++.. .|+||+||++|+|+++...+
T Consensus 167 FG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~p 229 (432)
T 3p23_A 167 FGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229 (432)
T ss_dssp TTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBT
T ss_pred ccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 9987431 19999999999999943333
No 317
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.91 E-value=1.7e-25 Score=244.38 Aligned_cols=164 Identities=20% Similarity=0.240 Sum_probs=130.1
Q ss_pred CCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCCcccceEE
Q 005898 485 FDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (671)
Q Consensus 485 f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~~~~~~~ 563 (671)
|...++||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+.+ ..+
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--------~~~ 85 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDR--------FLY 85 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--------EEE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCC--------eEE
Confidence 44568899999999987766679999999986432 35678899999876 8999999999887653 789
Q ss_pred EEEecCCCCChhhhhhcCCCC-C---CCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCC----------
Q 005898 564 LVYEFMSNGNFRTHISENTPG-K---VLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH---------- 629 (671)
Q Consensus 564 Lv~Ey~~~GsL~~~l~~~~~~-~---~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~---------- 629 (671)
+||||+. |+|.+++...... . ...+..+..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccC
Confidence 9999995 6999999764321 1 123345678999999999999987 89999999999999754
Q ss_pred ---CcEEEcccCCcccc-----------------------------------------ccccccceeeeeeehhhhcc
Q 005898 630 ---RIAKLSDYGLSIVS-----------------------------------------EDINSVGVRLLILMSFFFGS 663 (671)
Q Consensus 630 ---~~~ki~DfGla~~~-----------------------------------------~d~~s~g~~l~~~~~~~~~~ 663 (671)
+.+||+|||+++.. .|+||+||++|||+++...|
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~P 239 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCT
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCC
Confidence 58999999988531 29999999999999843333
No 318
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.91 E-value=2.4e-25 Score=237.91 Aligned_cols=171 Identities=19% Similarity=0.280 Sum_probs=142.2
Q ss_pred cCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCchhhHHHHHHHHHHHhcCC-----------CCCcccccceeec
Q 005898 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-----------HPHLVCLLGHCID 550 (671)
Q Consensus 483 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~~ 550 (671)
++|+..+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++.+++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5688899999999999999996 478999999997543 34567889999998886 8999999999875
Q ss_pred CCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeec---
Q 005898 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN--- 627 (671)
Q Consensus 551 ~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~--- 627 (671)
.+. .....++||||+ +|+|.+++.... ...+++..+..++.||+.||+|||+.+ +|+||||||+||+++
T Consensus 98 ~~~----~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 98 KGP----NGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EET----TEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred cCC----CCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 421 113689999999 889999987643 234899999999999999999999853 699999999999994
Q ss_pred ---CCCcEEEcccCCccccc---------------------------cccccceeeeeeehhhhc
Q 005898 628 ---EHRIAKLSDYGLSIVSE---------------------------DINSVGVRLLILMSFFFG 662 (671)
Q Consensus 628 ---~~~~~ki~DfGla~~~~---------------------------d~~s~g~~l~~~~~~~~~ 662 (671)
..+.+||+|||+++..+ |+||+||++|+|+++...
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 234 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCC
T ss_pred CCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence 44589999999986422 999999999999997543
No 319
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.91 E-value=5.4e-25 Score=229.76 Aligned_cols=167 Identities=26% Similarity=0.333 Sum_probs=129.4
Q ss_pred hcCCCcCceeccCCceEEEEEEEc-CCcEEEEEEccCCch--hhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCcc
Q 005898 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 482 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.++..+++.++||||+++++++.+.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~------ 97 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT------ 97 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC------
Confidence 356888899999999999999975 799999999975432 22334555566788899999999999998753
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..++||||+ ++.+..+.... ...+++..+..++.++++||+|||+.+ +|+||||||+||+++.++.+||+|||
T Consensus 98 --~~~lv~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg 170 (318)
T 2dyl_A 98 --DVFIAMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFG 170 (318)
T ss_dssp --EEEEEECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred --cEEEEEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECC
Confidence 689999999 44555544432 234899999999999999999999731 68999999999999999999999999
Q ss_pred Ccccc----------------------------------ccccccceeeeeeehhhh
Q 005898 639 LSIVS----------------------------------EDINSVGVRLLILMSFFF 661 (671)
Q Consensus 639 la~~~----------------------------------~d~~s~g~~l~~~~~~~~ 661 (671)
+++.. .|+||+|+++|+|+++..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~ 227 (318)
T 2dyl_A 171 ISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQF 227 (318)
T ss_dssp TC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSC
T ss_pred CchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCC
Confidence 88431 299999999999999753
No 320
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.5e-23 Score=216.26 Aligned_cols=201 Identities=24% Similarity=0.307 Sum_probs=107.9
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcC
Q 005898 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (671)
Q Consensus 114 l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (671)
+.++++|+.+++++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+ . +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCC
Confidence 455666666666666664 3444332 456666666666665555566666666666666666654322 1 5556666
Q ss_pred EEEcccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCC
Q 005898 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSG 272 (671)
Q Consensus 194 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~ 272 (671)
+|++++|+++ .+|..+..+++|+.|++++|++++..|. +..+++|++|+|++|++++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~--------------------- 138 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT--------------------- 138 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC---------------------
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc---------------------
Confidence 6666666665 4555555555555555555555544432 4455555555555444432
Q ss_pred CchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcC
Q 005898 273 EIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKL 342 (671)
Q Consensus 273 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l 342 (671)
..+..|..+++|+.|+|++|++++.++..+..+++|+.|+|++|+++ .+|..+....+|+.++|++|.+
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 22233444555555555555555555544455555555555555554 3444444444444444444444
No 321
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.91 E-value=1.4e-24 Score=244.25 Aligned_cols=153 Identities=15% Similarity=0.187 Sum_probs=113.8
Q ss_pred eccCCceEEEEEE-EcCCcEEEEEEccCCc----------hhhHHHHHHHHHHHhcC-CCCCcccccceeecCCCCCCcc
Q 005898 491 MGEGSYGKLYKGR-LENGTSVAIRCLPSSK----------KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 491 iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~----------~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~~ 558 (671)
.+.|+.|.+++++ ...|+.+|||.+.... ....++|.+|+++|+++ .|+||+++++++.+..
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~------ 315 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ------ 315 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS------
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC------
Confidence 5677777777765 4468999999996431 22356799999999999 6999999999998764
Q ss_pred cceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEcccC
Q 005898 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfG 638 (671)
..||||||++||+|.+.+...++ ++.. +|+.||+.||+|+|++ +||||||||+|||+++++.+||+|||
T Consensus 316 --~~yLVMEyv~G~~L~d~i~~~~~---l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFG 384 (569)
T 4azs_A 316 --SGWLVMEKLPGRLLSDMLAAGEE---IDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFG 384 (569)
T ss_dssp --EEEEEEECCCSEEHHHHHHTTCC---CCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCT
T ss_pred --EEEEEEecCCCCcHHHHHHhCCC---CCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecc
Confidence 78999999999999999986543 5543 5899999999999998 89999999999999999999999999
Q ss_pred Cccccc-----------------------------cccccceeeeeeehhh
Q 005898 639 LSIVSE-----------------------------DINSVGVRLLILMSFF 660 (671)
Q Consensus 639 la~~~~-----------------------------d~~s~g~~l~~~~~~~ 660 (671)
+|+... |+|+.|+++|++.++.
T Consensus 385 lAr~~~~~~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 385 SIVTTPQDCSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp TEESCC---CCSHHHHHHHHHHHHHHC-----------------CCCCTTH
T ss_pred cCeeCCCCCccccCceechhhccHHHhCCCCCCcccccccccchhhhcccc
Confidence 997542 7888888888877654
No 322
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.7e-23 Score=214.43 Aligned_cols=205 Identities=22% Similarity=0.239 Sum_probs=175.0
Q ss_pred cccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCC
Q 005898 137 KIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTL 216 (671)
Q Consensus 137 ~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L 216 (671)
.++++++|+++++++|.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|++++. |.. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcC
Confidence 4778899999999999997 5676664 6889999999999888888899999999999999998853 333 778889
Q ss_pred CEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccC
Q 005898 217 SDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRG 296 (671)
Q Consensus 217 ~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 296 (671)
+.|++++|.++..+..+..+++|++|++++|+++ +..|..|..+++|++|+|++|++++
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~---------------------~l~~~~~~~l~~L~~L~L~~N~l~~ 138 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT---------------------SLPLGALRGLGELQELYLKGNELKT 138 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCC---------------------CCCSSTTTTCTTCCEEECTTSCCCC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCc---------------------ccCHHHHcCCCCCCEEECCCCCCCc
Confidence 9999999988855445777888888888777665 3445678889999999999999999
Q ss_pred CCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 297 MPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 297 ~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
.++..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+.....++.+++++|.+.+
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 99988999999999999999999766667788999999999999999 788888888899999999998874
No 323
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.1e-23 Score=219.59 Aligned_cols=227 Identities=22% Similarity=0.261 Sum_probs=176.7
Q ss_pred CCCCEEeccccccccc-CCc--cccCCCCCCEEEcccCcCCCCCCccC--CCCCccCEEEccCCcCCCCCC----cccCC
Q 005898 118 TSLRVLSLVSLGIWGS-LPD--KIHRLYSLEYLDLSSNFLFGSVPPKI--STMVKLQTLILDDNFFNNTIP----NWFDS 188 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~-~p~--~~~~L~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 188 (671)
..++.|.+.++.+... +.. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3577888887766432 111 12345679999999999999999888 899999999999999998766 34567
Q ss_pred CCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccc---cCC--CCCCCCCCEEECCCCCCCCCCCCCCCCccEE
Q 005898 189 LPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGS---LPD--LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMA 263 (671)
Q Consensus 189 l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~---~p~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l 263 (671)
+++|++|+|++|++++..|..+..+++|++|+|++|++.+. .+. +..+++|++|+|++|+++..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l----------- 212 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP----------- 212 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-----------
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-----------
Confidence 99999999999999988888999999999999999998763 222 36788888888888776420
Q ss_pred EcCCCCCCCCchh-hhcCCcccceeecccccccCCCccccCCC---CCcCeEecccCcCcccCCcccCCCCCccEEECcC
Q 005898 264 FLSNNSFSGEIPK-QYGQLNQLQQLDMSFNALRGMPPPAIFSL---PNISDLNLASNKFSGSLPKNLNCGGKLVFFDISN 339 (671)
Q Consensus 264 ~l~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~ 339 (671)
+..+. .++.+++|++|||++|++++..|+.+..+ ++|+.|+|++|+++ .+|..+. ++|+.|||++
T Consensus 213 --------~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~ 281 (310)
T 4glp_A 213 --------TGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSS 281 (310)
T ss_dssp --------HHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCS
T ss_pred --------HHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCC
Confidence 01122 35778899999999999998877677666 68999999999998 6777664 7899999999
Q ss_pred CcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 340 NKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 340 N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
|++++. |. +..+++++.+++++|+++.
T Consensus 282 N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 282 NRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 999863 33 4567888999999998873
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.6e-23 Score=214.17 Aligned_cols=221 Identities=22% Similarity=0.272 Sum_probs=185.4
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
.++..+++..+.+... ..+..+++|+.|++++|.++. + +.+..+++|++|+|++|.+++ + ..+..+++|++|++
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEEC
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEEC
Confidence 3444556666666444 346788999999999999863 3 358889999999999999986 3 47889999999999
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchh
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPK 276 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~ 276 (671)
++|++++..|..+..+++|++|++++|.+++.++. +..+++|++|++++|++++ ..|.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------~~~~ 151 (272)
T 3rfs_A 93 TGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS---------------------LPKG 151 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------CCTT
T ss_pred CCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCc---------------------cCHH
Confidence 99999987777789999999999999999987775 6888899998888877653 4455
Q ss_pred hhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCC
Q 005898 277 QYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDK 356 (671)
Q Consensus 277 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l 356 (671)
.++.+++|+.|++++|++++.++..+..+++|+.|++++|++++..|..+..+++|+.|++++|.++|..| .+
T Consensus 152 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-------~l 224 (272)
T 3rfs_A 152 VFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GI 224 (272)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-------TT
T ss_pred HhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-------HH
Confidence 67889999999999999999999889999999999999999999888889999999999999999987644 57
Q ss_pred ceeccCCCcCCCCcCC
Q 005898 357 RVVKFRGNCLSSNVQN 372 (671)
Q Consensus 357 ~~l~l~~N~l~~~~~~ 372 (671)
+.+++..|.++|.++.
T Consensus 225 ~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 225 RYLSEWINKHSGVVRN 240 (272)
T ss_dssp HHHHHHHHHTGGGBBC
T ss_pred HHHHHHHHhCCCcccC
Confidence 8888889998876553
No 325
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=5.8e-23 Score=205.64 Aligned_cols=195 Identities=17% Similarity=0.205 Sum_probs=144.1
Q ss_pred CCCEEecccccccccCCccccCCCCCCEEEcccCc-CCCCCCccCCCCCccCEEEccC-CcCCCCCCcccCCCCCcCEEE
Q 005898 119 SLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNF-LFGSVPPKISTMVKLQTLILDD-NFFNNTIPNWFDSLPSLTFLS 196 (671)
Q Consensus 119 ~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 196 (671)
+|++|+|++|++.+..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |.+++..|..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78899999999988777789999999999999997 7766666888899999999998 888877777888899999999
Q ss_pred cccccCCCCCcccccCCCCCC---EEEeccC-ccccccCC-CCCCCCCC-EEECCCCCCCCCCCCCCCCccEEEcCCCCC
Q 005898 197 MRNNKLAGPFPSSIQRISTLS---DLDLSKN-AISGSLPD-LSSLGSLN-VLNLSDNKLDSNLPKLPRGLVMAFLSNNSF 270 (671)
Q Consensus 197 L~~N~l~g~~p~~l~~l~~L~---~L~Ls~N-~l~g~~p~-~~~l~~L~-~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l 270 (671)
+++|++++ +|. +..+++|+ .|++++| .+++..+. +..+++|+ .|++++|+++.
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~------------------- 170 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS------------------- 170 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE-------------------
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc-------------------
Confidence 99998886 676 77888887 8888888 88776654 67788888 88887776652
Q ss_pred CCCchhhhcCCcccceeeccccc-ccCCCccccCCC-CCcCeEecccCcCcccCCcccCCCCCccEEECcCC
Q 005898 271 SGEIPKQYGQLNQLQQLDMSFNA-LRGMPPPAIFSL-PNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNN 340 (671)
Q Consensus 271 ~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N 340 (671)
+|......++|+.|++++|+ +++.++..+..+ ++|+.|++++|++++ +|.. .+.+|+.|+++++
T Consensus 171 ---i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 171 ---VQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp ---ECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred ---cCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 22221122566666776663 666666666666 666667776666663 3332 3455666666554
No 326
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.5e-23 Score=218.44 Aligned_cols=202 Identities=18% Similarity=0.213 Sum_probs=157.8
Q ss_pred CCCCCCEEecccccccccCCccc--cCCCCCCEEEcccCcCCCCCC----ccCCCCCccCEEEccCCcCCCCCCcccCCC
Q 005898 116 RLTSLRVLSLVSLGIWGSLPDKI--HRLYSLEYLDLSSNFLFGSVP----PKISTMVKLQTLILDDNFFNNTIPNWFDSL 189 (671)
Q Consensus 116 ~l~~L~~L~L~~n~l~g~~p~~~--~~L~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 189 (671)
.+++|++|+|++|.+.+..|..+ .++++|++|+|++|.+++..| ..+..+++|++|+|++|.+++..|..|+++
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 45679999999999999999998 999999999999999988666 456789999999999999999888999999
Q ss_pred CCcCEEEcccccCCCC--Cc--ccccCCCCCCEEEeccCccccccCC----CCCCCCCCEEECCCCCCCCCCCCCCCCcc
Q 005898 190 PSLTFLSMRNNKLAGP--FP--SSIQRISTLSDLDLSKNAISGSLPD----LSSLGSLNVLNLSDNKLDSNLPKLPRGLV 261 (671)
Q Consensus 190 ~~L~~L~L~~N~l~g~--~p--~~l~~l~~L~~L~Ls~N~l~g~~p~----~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~ 261 (671)
++|++|+|++|++.+. ++ ..+..+++|++|+|++|+++...+. +..+++|++|+|++|++++..|
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p------- 241 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVN------- 241 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCC-------
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccch-------
Confidence 9999999999998753 32 2347899999999999999743321 4678899999999988876544
Q ss_pred EEEcCCCCCCCCchhhhcCC---cccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECc
Q 005898 262 MAFLSNNSFSGEIPKQYGQL---NQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDIS 338 (671)
Q Consensus 262 ~l~l~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls 338 (671)
..+..+ ++|++|+|++|+++..+ ..+. ++|+.|+|++|++++. |. +..+++|+.|+++
T Consensus 242 --------------~~~~~~~~~~~L~~L~Ls~N~l~~lp-~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~ 302 (310)
T 4glp_A 242 --------------PSAPRCMWSSALNSLNLSFAGLEQVP-KGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLD 302 (310)
T ss_dssp --------------SCCSSCCCCTTCCCEECCSSCCCSCC-SCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECS
T ss_pred --------------hhHHhccCcCcCCEEECCCCCCCchh-hhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECc
Confidence 233333 46777777777777443 3332 6777777777777753 32 4556777777777
Q ss_pred CCcCc
Q 005898 339 NNKLT 343 (671)
Q Consensus 339 ~N~l~ 343 (671)
+|.++
T Consensus 303 ~N~l~ 307 (310)
T 4glp_A 303 GNPFL 307 (310)
T ss_dssp STTTS
T ss_pred CCCCC
Confidence 77775
No 327
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.88 E-value=7.5e-24 Score=229.89 Aligned_cols=178 Identities=17% Similarity=0.195 Sum_probs=132.2
Q ss_pred HhcCCCcCceeccCCceEEEEEEE-cCCcEEEEEEccCCch---hhHHHHHHHHHHHhcCCC-CCcccccce--------
Q 005898 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRH-PHLVCLLGH-------- 547 (671)
Q Consensus 481 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H-~niv~l~g~-------- 547 (671)
.+..|...++||+|+||+||+|+. .+|+.||||++..... ...+.+.+|+.+++.++| +|......+
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 345577789999999999999995 4799999999874332 235779999999999987 433222211
Q ss_pred -eecCCCC---------CCcccceEEEEEecCCCCChhhhhhc----CCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCC
Q 005898 548 -CIDGGGR---------DDYAVNKVFLVYEFMSNGNFRTHISE----NTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPG 613 (671)
Q Consensus 548 -~~~~~~~---------~~~~~~~~~Lv~Ey~~~GsL~~~l~~----~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ 613 (671)
+...+.. ........+++|+++ +|+|.+++.. ......++|..++.++.|+++||+|||+. +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 1110000 000122456777765 6799988742 12234588999999999999999999987 8
Q ss_pred ccccCCCCCceeecCCCcEEEcccCCccc------------------------------------cccccccceeeeeee
Q 005898 614 FFNNRVKTNNILLNEHRIAKLSDYGLSIV------------------------------------SEDINSVGVRLLILM 657 (671)
Q Consensus 614 iiHrDlk~~NiLl~~~~~~ki~DfGla~~------------------------------------~~d~~s~g~~l~~~~ 657 (671)
|+||||||+|||++.++.+||+|||+++. ..|+||+||++|+|+
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999741 239999999999999
Q ss_pred hhhhc
Q 005898 658 SFFFG 662 (671)
Q Consensus 658 ~~~~~ 662 (671)
++...
T Consensus 312 tg~~P 316 (413)
T 3dzo_A 312 CADLP 316 (413)
T ss_dssp HSSCC
T ss_pred HCCCC
Confidence 97553
No 328
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.7e-22 Score=202.32 Aligned_cols=203 Identities=18% Similarity=0.239 Sum_probs=169.3
Q ss_pred cCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCc-CCCCCCcccCCCCCcCEEEccc-ccCCCCCcccc
Q 005898 133 SLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNF-FNNTIPNWFDSLPSLTFLSMRN-NKLAGPFPSSI 210 (671)
Q Consensus 133 ~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~l 210 (671)
.+|. +. .+|++|+|++|++++..+..|.++++|++|++++|. ++...+..|.++++|++|++++ |++++..|..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4565 33 389999999999998777799999999999999997 8876677899999999999998 99997777789
Q ss_pred cCCCCCCEEEeccCccccccCCCCCCCCCC---EEECCCC-CCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccc-
Q 005898 211 QRISTLSDLDLSKNAISGSLPDLSSLGSLN---VLNLSDN-KLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQ- 285 (671)
Q Consensus 211 ~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~- 285 (671)
..+++|+.|++++|.+++ +|.+..+++|+ +|++++| ++ ++..+..|..+++|+
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l---------------------~~i~~~~~~~l~~L~~ 159 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYM---------------------TSIPVNAFQGLCNETL 159 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTC---------------------CEECTTTTTTTBSSEE
T ss_pred CCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcch---------------------hhcCcccccchhccee
Confidence 999999999999999997 66677777777 7776666 44 334455688899999
Q ss_pred eeecccccccCCCccccCCCCCcCeEecccCc-CcccCCcccCCC-CCccEEECcCCcCcccCCCCCCCCCCCceeccCC
Q 005898 286 QLDMSFNALRGMPPPAIFSLPNISDLNLASNK-FSGSLPKNLNCG-GKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRG 363 (671)
Q Consensus 286 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~ 363 (671)
.|++++|+++..++..+.. ++|+.|+|++|+ +++..+..+..+ .+|+.||+++|++++ +|.. .+++++.|++++
T Consensus 160 ~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~ 235 (239)
T 2xwt_C 160 TLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARN 235 (239)
T ss_dssp EEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTT
T ss_pred EEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccC
Confidence 9999999999777655555 899999999995 997777788888 999999999999995 5544 466788888776
Q ss_pred C
Q 005898 364 N 364 (671)
Q Consensus 364 N 364 (671)
+
T Consensus 236 ~ 236 (239)
T 2xwt_C 236 T 236 (239)
T ss_dssp C
T ss_pred c
Confidence 4
No 329
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.1e-24 Score=234.43 Aligned_cols=244 Identities=20% Similarity=0.261 Sum_probs=170.8
Q ss_pred cchhcccCCCCCCEEeccccccccc----CCccccCCCCCCEEEcccC---cCCCCCCccC-------CCCCccCEEEcc
Q 005898 109 SFVTTLARLTSLRVLSLVSLGIWGS----LPDKIHRLYSLEYLDLSSN---FLFGSVPPKI-------STMVKLQTLILD 174 (671)
Q Consensus 109 ~~~~~l~~l~~L~~L~L~~n~l~g~----~p~~~~~L~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~L~ 174 (671)
.++..+..+++|++|+|++|.+.+. ++..+.++++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 3456677788888888888888765 3344668888888888885 4445556554 677888888888
Q ss_pred CCcCCC----CCCcccCCCCCcCEEEcccccCCCCCcccc----cCC---------CCCCEEEeccCccc-cccC----C
Q 005898 175 DNFFNN----TIPNWFDSLPSLTFLSMRNNKLAGPFPSSI----QRI---------STLSDLDLSKNAIS-GSLP----D 232 (671)
Q Consensus 175 ~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l----~~l---------~~L~~L~Ls~N~l~-g~~p----~ 232 (671)
+|.++. .+|..+.++++|++|+|++|.+++..+..+ ..+ ++|+.|+|++|.++ +.+| .
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 888876 466677778888888888887764333333 333 77777777777776 3344 2
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeeccccccc----CCCccccCCCCCc
Q 005898 233 LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALR----GMPPPAIFSLPNI 308 (671)
Q Consensus 233 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~~L 308 (671)
+..+++|+.|++++|+++.. .+...+|..+..+++|+.|+|++|.++ +.+|..+..+++|
T Consensus 183 l~~~~~L~~L~L~~n~l~~~----------------g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L 246 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPE----------------GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 246 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHH----------------HHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTC
T ss_pred HHhCCCcCEEECcCCCCCHh----------------HHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCc
Confidence 44566777777777665410 000023446777888888888888886 5566677788888
Q ss_pred CeEecccCcCccc----CCccc--CCCCCccEEECcCCcCcc----cCCCCC-CCCCCCceeccCCCcCCC
Q 005898 309 SDLNLASNKFSGS----LPKNL--NCGGKLVFFDISNNKLTG----GLPSCL-SNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 309 ~~L~L~~N~l~g~----~p~~~--~~~~~L~~l~ls~N~l~g----~~p~~~-~~~~~l~~l~l~~N~l~~ 368 (671)
+.|+|++|.+++. +|..+ ..+++|+.|+|++|.+++ .+|..+ .++++++.+++++|.+++
T Consensus 247 ~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 247 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp CEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 8888888888765 55655 337788888888888887 477766 556788888888888874
No 330
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.9e-22 Score=209.98 Aligned_cols=195 Identities=24% Similarity=0.407 Sum_probs=145.2
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcC
Q 005898 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (671)
Q Consensus 114 l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (671)
+.++++|+.|++++|.+.. +| .+..+++|++|+|++|.+++ +|+ +..+++|++|+|++|.+++ +| .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 4567788888888888754 45 57888888888888888875 444 8888888888888888875 33 678888888
Q ss_pred EEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCC
Q 005898 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGE 273 (671)
Q Consensus 194 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~ 273 (671)
+|++++|++++ +|. +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++
T Consensus 111 ~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~---------------------- 165 (308)
T 1h6u_A 111 TLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD---------------------- 165 (308)
T ss_dssp EEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC----------------------
T ss_pred EEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC----------------------
Confidence 88888888875 443 7888888888888888876544 7777888888887776653
Q ss_pred chhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcc
Q 005898 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTG 344 (671)
Q Consensus 274 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g 344 (671)
++. +..+++|+.|++++|++++.++ +..+++|+.|+|++|++++..| +..+++|+.|++++|.+++
T Consensus 166 ~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 166 LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 222 6667777777777777776654 6677777777777777775543 6667777777777777764
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=8.8e-22 Score=198.64 Aligned_cols=177 Identities=27% Similarity=0.309 Sum_probs=108.2
Q ss_pred CCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEccc
Q 005898 120 LRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRN 199 (671)
Q Consensus 120 L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (671)
.+.++++++.+. .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 455666666664 4554443 4677777777777666666677777777777777777766666667777777777777
Q ss_pred ccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhh
Q 005898 200 NKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQY 278 (671)
Q Consensus 200 N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~ 278 (671)
|++++..|..+..+++|++|+|++|.+++..+. +..+++|+.|+|++|++++ ..|..|
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---------------------~~~~~~ 151 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS---------------------IPAGAF 151 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------CCTTTT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCc---------------------cCHHHc
Confidence 777655555566666666666666666654443 3555555555555554432 223345
Q ss_pred cCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcc
Q 005898 279 GQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSG 320 (671)
Q Consensus 279 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g 320 (671)
+.+++|+.|+|++|++++.++..+..+++|+.|+|++|++++
T Consensus 152 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 152 DKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 555556666666666665555555555555555555555554
No 332
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.3e-21 Score=197.49 Aligned_cols=179 Identities=23% Similarity=0.314 Sum_probs=147.9
Q ss_pred CCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEec
Q 005898 143 SLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLS 222 (671)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls 222 (671)
+.+++++++|.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..+..+++|+.|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 5778999999986 5776665 688999999999998888889999999999999999998777888889999999999
Q ss_pred cCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccc
Q 005898 223 KNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPA 301 (671)
Q Consensus 223 ~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 301 (671)
+|.+++..+. +..+++|++|+|++|++++ ..+..|..+++|+.|+|++|++++.++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~---------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 150 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKS---------------------LPSGVFDRLTKLKELRLNTNQLQSIPAGA 150 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------CCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCC---------------------cChhHhccCCcccEEECcCCcCCccCHHH
Confidence 9998876664 5778888888887776653 33445677888889999999988888878
Q ss_pred cCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCccc
Q 005898 302 IFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGG 345 (671)
Q Consensus 302 ~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~ 345 (671)
+..+++|+.|+|++|++++..|..+..+++|+.|++++|.+++.
T Consensus 151 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 151 FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 88888888888888888877777788888888888888888765
No 333
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.88 E-value=4.1e-21 Score=217.56 Aligned_cols=222 Identities=26% Similarity=0.307 Sum_probs=186.5
Q ss_pred CcchhcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccC
Q 005898 108 DSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFD 187 (671)
Q Consensus 108 ~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 187 (671)
..+|..+. ++|++|+|++|.+. .+|. .+++|++|+|++|+++ .+|. .+++|++|+|++|.+++ +|.
T Consensus 53 ~~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~--- 118 (622)
T 3g06_A 53 TTLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA--- 118 (622)
T ss_dssp SCCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---
T ss_pred CccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---
Confidence 36666665 79999999999997 5666 6789999999999997 4666 77999999999999986 555
Q ss_pred CCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCC
Q 005898 188 SLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSN 267 (671)
Q Consensus 188 ~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~ 267 (671)
.+++|+.|++++|++++ +|.. +++|++|+|++|.+++.. . .+++|+.|++++|++++ +|..+.+|+.|++++
T Consensus 119 ~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~-~--~~~~L~~L~L~~N~l~~-l~~~~~~L~~L~Ls~ 190 (622)
T 3g06_A 119 LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLP-A--LPSELCKLWAYNNQLTS-LPMLPSGLQELSVSD 190 (622)
T ss_dssp CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCC-C--CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCS
T ss_pred CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcC-C--ccCCCCEEECCCCCCCC-CcccCCCCcEEECCC
Confidence 67899999999999985 6764 489999999999998643 3 35789999999999987 567778999999999
Q ss_pred CCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCC
Q 005898 268 NSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLP 347 (671)
Q Consensus 268 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p 347 (671)
|.+++ +|.. +++|+.|++++|.++..+. .+++|+.|+|++|++++ +| ..+++|+.|++++|+++ .+|
T Consensus 191 N~l~~-l~~~---~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp 257 (622)
T 3g06_A 191 NQLAS-LPTL---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLP 257 (622)
T ss_dssp SCCSC-CCCC---CTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCC
T ss_pred CCCCC-CCCc---cchhhEEECcCCcccccCC----CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCC
Confidence 99985 5543 4789999999999997664 35899999999999996 66 45588999999999999 577
Q ss_pred CCCCCCCCCceeccCCCcCC
Q 005898 348 SCLSNESDKRVVKFRGNCLS 367 (671)
Q Consensus 348 ~~~~~~~~l~~l~l~~N~l~ 367 (671)
. .+++++.|++++|.++
T Consensus 258 ~---~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 258 M---LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp C---CCTTCCEEECCSSCCC
T ss_pred c---ccccCcEEeCCCCCCC
Confidence 6 4678999999999988
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=2.2e-23 Score=222.17 Aligned_cols=245 Identities=18% Similarity=0.201 Sum_probs=189.8
Q ss_pred CCCccCCCcchhcccCCCCCCEEecccccccccCC----ccccCCC-CCCEEEcccCcCCCCCCccCCCC-----CccCE
Q 005898 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLP----DKIHRLY-SLEYLDLSSNFLFGSVPPKISTM-----VKLQT 170 (671)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p----~~~~~L~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~ 170 (671)
++.|...+.+|..+...++|++|+|++|.+.+..+ +.+.+++ +|++|+|++|.+++..+..+..+ ++|++
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 84 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS 84 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCE
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccE
Confidence 33344445666667777779999999999987766 7788888 89999999999988777777665 89999
Q ss_pred EEccCCcCCCCCCcccC----CC-CCcCEEEcccccCCCCCcccccC-----CCCCCEEEeccCccccccC-----CCCC
Q 005898 171 LILDDNFFNNTIPNWFD----SL-PSLTFLSMRNNKLAGPFPSSIQR-----ISTLSDLDLSKNAISGSLP-----DLSS 235 (671)
Q Consensus 171 L~L~~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~g~~p~~l~~-----l~~L~~L~Ls~N~l~g~~p-----~~~~ 235 (671)
|+|++|.+++..+..+. .+ ++|++|+|++|++++..+..+.. .++|++|+|++|.++...+ .+..
T Consensus 85 L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~ 164 (362)
T 3goz_A 85 LNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAA 164 (362)
T ss_dssp EECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHT
T ss_pred EECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhc
Confidence 99999999887776444 44 89999999999998776665543 3699999999999985332 1344
Q ss_pred CC-CCCEEECCCCCCCCCCCC--------CCCCccEEEcCCCCCCCC----chhhhcC-CcccceeecccccccCCCcc-
Q 005898 236 LG-SLNVLNLSDNKLDSNLPK--------LPRGLVMAFLSNNSFSGE----IPKQYGQ-LNQLQQLDMSFNALRGMPPP- 300 (671)
Q Consensus 236 l~-~L~~L~Ls~N~l~~~~p~--------~~~~L~~l~l~~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~~~- 300 (671)
++ +|++|+|++|++++..+. .+.+|+.+++++|.+++. ++..+.. .++|+.|+|++|.+++..+.
T Consensus 165 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~ 244 (362)
T 3goz_A 165 IPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLEN 244 (362)
T ss_dssp SCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHH
T ss_pred CCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHH
Confidence 54 899999999999775542 235899999999998863 5556665 45899999999999887663
Q ss_pred ---ccCCCCCcCeEecccCcCccc-------CCcccCCCCCccEEECcCCcCccc
Q 005898 301 ---AIFSLPNISDLNLASNKFSGS-------LPKNLNCGGKLVFFDISNNKLTGG 345 (671)
Q Consensus 301 ---~~~~l~~L~~L~L~~N~l~g~-------~p~~~~~~~~L~~l~ls~N~l~g~ 345 (671)
.+..+++|+.|+|++|.+.+. ++..+..+.+|+.||+++|++.+.
T Consensus 245 l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 245 LKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 346778999999999985433 344667788899999999998765
No 335
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=2.2e-24 Score=232.03 Aligned_cols=217 Identities=18% Similarity=0.244 Sum_probs=177.2
Q ss_pred ccCCccccCCCCCCEEEcccCcCCCC----CCccCCCCCccCEEEccCC---cCCCCCCccc-------CCCCCcCEEEc
Q 005898 132 GSLPDKIHRLYSLEYLDLSSNFLFGS----VPPKISTMVKLQTLILDDN---FFNNTIPNWF-------DSLPSLTFLSM 197 (671)
Q Consensus 132 g~~p~~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L 197 (671)
..++..+..+++|++|+|++|.+++. ++..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|
T Consensus 22 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~L 101 (386)
T 2ca6_A 22 KSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 101 (386)
T ss_dssp HTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEEC
Confidence 35777888999999999999999865 3455889999999999996 4556667655 78999999999
Q ss_pred ccccCCC----CCcccccCCCCCCEEEeccCccccccCC-----CCCC---------CCCCEEECCCCCCCCCCCCCCCC
Q 005898 198 RNNKLAG----PFPSSIQRISTLSDLDLSKNAISGSLPD-----LSSL---------GSLNVLNLSDNKLDSNLPKLPRG 259 (671)
Q Consensus 198 ~~N~l~g----~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-----~~~l---------~~L~~L~Ls~N~l~~~~p~~~~~ 259 (671)
++|.+++ .+|..+..+++|+.|+|++|.++...+. +..+ ++|++|+|++|+++.
T Consensus 102 s~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~-------- 173 (386)
T 2ca6_A 102 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN-------- 173 (386)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG--------
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc--------
Confidence 9999987 4788889999999999999999754332 2333 788888888777641
Q ss_pred ccEEEcCCCCCCCCch---hhhcCCcccceeeccccccc--C---CCccccCCCCCcCeEecccCcCc----ccCCcccC
Q 005898 260 LVMAFLSNNSFSGEIP---KQYGQLNQLQQLDMSFNALR--G---MPPPAIFSLPNISDLNLASNKFS----GSLPKNLN 327 (671)
Q Consensus 260 L~~l~l~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~~~~~~~l~~L~~L~L~~N~l~----g~~p~~~~ 327 (671)
+.+| ..+..+++|+.|++++|+++ | ..+..+..+++|+.|+|++|.++ +.+|..+.
T Consensus 174 ------------~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~ 241 (386)
T 2ca6_A 174 ------------GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALK 241 (386)
T ss_dssp ------------GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGG
T ss_pred ------------HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHc
Confidence 2344 57778899999999999998 3 44447888999999999999997 77888899
Q ss_pred CCCCccEEECcCCcCccc----CCCCC--CCCCCCceeccCCCcCCC
Q 005898 328 CGGKLVFFDISNNKLTGG----LPSCL--SNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 328 ~~~~L~~l~ls~N~l~g~----~p~~~--~~~~~l~~l~l~~N~l~~ 368 (671)
.+++|+.|+|++|.+++. +|..+ +.+++++.|++++|.++.
T Consensus 242 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 242 SWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp GCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred cCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 999999999999999876 56665 347899999999999875
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1.3e-23 Score=224.03 Aligned_cols=247 Identities=19% Similarity=0.157 Sum_probs=201.9
Q ss_pred EEecccccccccCCccccCCCCCCEEEcccCcCCCCCC----ccCCCCC-ccCEEEccCCcCCCCCCcccCCC-----CC
Q 005898 122 VLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVP----PKISTMV-KLQTLILDDNFFNNTIPNWFDSL-----PS 191 (671)
Q Consensus 122 ~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 191 (671)
.++|+.|+++|.+|+.+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46889999999999988888889999999999987766 7788888 99999999999998888777765 99
Q ss_pred cCEEEcccccCCCCCcccccC----C-CCCCEEEeccCccccccCC-----CCC-CCCCCEEECCCCCCCCCCC------
Q 005898 192 LTFLSMRNNKLAGPFPSSIQR----I-STLSDLDLSKNAISGSLPD-----LSS-LGSLNVLNLSDNKLDSNLP------ 254 (671)
Q Consensus 192 L~~L~L~~N~l~g~~p~~l~~----l-~~L~~L~Ls~N~l~g~~p~-----~~~-l~~L~~L~Ls~N~l~~~~p------ 254 (671)
|++|+|++|++++..+..+.. + ++|+.|+|++|.+++..+. +.. .++|++|+|++|+++...+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999999887775544 4 8999999999999876553 344 3699999999999985332
Q ss_pred --CCCCCccEEEcCCCCCCCCchhhhc----CC-cccceeecccccccCCC----ccccCC-CCCcCeEecccCcCcccC
Q 005898 255 --KLPRGLVMAFLSNNSFSGEIPKQYG----QL-NQLQQLDMSFNALRGMP----PPAIFS-LPNISDLNLASNKFSGSL 322 (671)
Q Consensus 255 --~~~~~L~~l~l~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~----~~~~~~-l~~L~~L~L~~N~l~g~~ 322 (671)
..+.+|+.|++++|.+++..+..+. .+ ++|+.|||++|.+++.. +..+.. .++|+.|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 2335899999999999988776554 44 69999999999999843 334444 459999999999998754
Q ss_pred C----cccCCCCCccEEECcCCcCccc-------CCCCCCCCCCCceeccCCCcCCC
Q 005898 323 P----KNLNCGGKLVFFDISNNKLTGG-------LPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 323 p----~~~~~~~~L~~l~ls~N~l~g~-------~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
+ ..+..+.+|+.|++++|.+++. ++..+..++.++.+++++|.+..
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 4 3456778999999999995432 34566778889999999998764
No 337
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.5e-21 Score=218.62 Aligned_cols=185 Identities=27% Similarity=0.396 Sum_probs=131.0
Q ss_pred CCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcc
Q 005898 119 SLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMR 198 (671)
Q Consensus 119 ~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 198 (671)
+|+.|+|++|++.+ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|.|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78899999998876 777663 78999999999887 577 457888899999998887 777 665 88889998
Q ss_pred cccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhh
Q 005898 199 NNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQY 278 (671)
Q Consensus 199 ~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~ 278 (671)
+|++++ +|. .+++|+.|+|++|.+++ +|. .+++|+.|+|++|++++ +|.+..+|+.|+|++|.|+ .+|. +
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~-lp~l~~~L~~L~Ls~N~L~-~lp~-~ 198 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQLTF-LPELPESLEALDVSTNLLE-SLPA-V 198 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS-SCCC-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCCCC-cchhhCCCCEEECcCCCCC-chhh-H
Confidence 888886 666 67888888888888887 454 57788888888888876 4444456666666666666 4454 4
Q ss_pred cCCccc-------ceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccC
Q 005898 279 GQLNQL-------QQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLN 327 (671)
Q Consensus 279 ~~l~~L-------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~ 327 (671)
.. +| +.|+|++|+|+.+| ..+..+++|+.|+|++|++++.+|..+.
T Consensus 199 ~~--~L~~~~~~L~~L~Ls~N~l~~lp-~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 199 PV--RNHHSEETEIFFRCRENRITHIP-ENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp C----------CCEEEECCSSCCCCCC-GGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred HH--hhhcccccceEEecCCCcceecC-HHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 33 45 66666666666433 3444466666666666666665555443
No 338
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.86 E-value=1.2e-22 Score=227.33 Aligned_cols=157 Identities=13% Similarity=0.170 Sum_probs=118.1
Q ss_pred CcCceeccCCceEEEEEEEcCCcEEEEEEccCCc--------hhhHHHHHHHHHHHhcCCCCCcccccceeecCCCCCCc
Q 005898 486 DMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--------KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 486 ~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 557 (671)
...++||+|+||.||+|+. .++.+|+|+..... ....+.+.+|++++++++||||+++..++.+.+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~----- 412 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD----- 412 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT-----
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC-----
Confidence 3467899999999999954 47889998864321 112456899999999999999997766666543
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCCCcEEEccc
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~Df 637 (671)
..++||||+++|+|.+++.. +..++.|+++||+|||+. +|+||||||+|||+++ ++||+||
T Consensus 413 ---~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DF 473 (540)
T 3en9_A 413 ---NKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDF 473 (540)
T ss_dssp ---TTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCC
T ss_pred ---ccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEEC
Confidence 45999999999999999874 568999999999999987 7999999999999998 9999999
Q ss_pred CCccccccccccceeeeeeehhhhcccccc
Q 005898 638 GLSIVSEDINSVGVRLLILMSFFFGSMTSC 667 (671)
Q Consensus 638 Gla~~~~d~~s~g~~l~~~~~~~~~~~~~~ 667 (671)
|+++...+.-..+..++.+...+.||+.|.
T Consensus 474 Gla~~~~~~~~~~~~~~~~~~~~~GT~~y~ 503 (540)
T 3en9_A 474 GLGKISNLDEDKAVDLIVFKKAVLSTHHEK 503 (540)
T ss_dssp TTCEECCCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred ccCEECCCccccccchhhhhhhhcCCCCcC
Confidence 999988764444444444455566666664
No 339
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2.7e-21 Score=216.58 Aligned_cols=186 Identities=24% Similarity=0.406 Sum_probs=143.8
Q ss_pred CCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEec
Q 005898 143 SLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLS 222 (671)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls 222 (671)
+|+.|+|++|++++ +|..+. ++|++|+|++|.|+ .+| ..+++|++|++++|+|++ +|. +.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78888888888876 776653 77888888888888 567 457888888888888886 777 655 88888888
Q ss_pred cCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCcccc
Q 005898 223 KNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAI 302 (671)
Q Consensus 223 ~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 302 (671)
+|.+++ +|. .+++|+.|+|++|++++ +|..+.+|+.|++++|.+++ +|. |. ++|+.|+|++|+|+.+++ +
T Consensus 129 ~N~l~~-lp~--~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~--~ 198 (571)
T 3cvr_A 129 NNQLTM-LPE--LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA--V 198 (571)
T ss_dssp SSCCSC-CCC--CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC--C
T ss_pred CCcCCC-CCC--cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh--H
Confidence 888887 555 67888888888888877 56566788888888888886 666 55 788888888888885554 4
Q ss_pred CCCCCc-------CeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCC
Q 005898 303 FSLPNI-------SDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSN 352 (671)
Q Consensus 303 ~~l~~L-------~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~ 352 (671)
.. +| +.|+|++|+++ .+|..+..+++|+.|+|++|.+++.+|..+..
T Consensus 199 ~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 199 PV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp C----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred HH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 43 66 88888888888 57777777888888888888888877766544
No 340
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=1.4e-23 Score=220.96 Aligned_cols=202 Identities=22% Similarity=0.255 Sum_probs=138.4
Q ss_pred hcccCC--CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCC-CCccCCCCCccCEEEccCCcCCCCCCcccCC
Q 005898 112 TTLARL--TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGS-VPPKISTMVKLQTLILDDNFFNNTIPNWFDS 188 (671)
Q Consensus 112 ~~l~~l--~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 188 (671)
..+..+ ++++.|++++|.+.+..|. +.++++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.
T Consensus 62 ~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~ 140 (336)
T 2ast_B 62 DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK 140 (336)
T ss_dssp HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTT
T ss_pred HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhc
Confidence 345555 7889999999998877665 56789999999999988765 7788888999999999999888888888888
Q ss_pred CCCcCEEEcccc-cCCC-CCcccccCCCCCCEEEeccC-ccccc-cCC-CCCCC-CCCEEECCCC--CCC-CCCCCC---
Q 005898 189 LPSLTFLSMRNN-KLAG-PFPSSIQRISTLSDLDLSKN-AISGS-LPD-LSSLG-SLNVLNLSDN--KLD-SNLPKL--- 256 (671)
Q Consensus 189 l~~L~~L~L~~N-~l~g-~~p~~l~~l~~L~~L~Ls~N-~l~g~-~p~-~~~l~-~L~~L~Ls~N--~l~-~~~p~~--- 256 (671)
+++|++|++++| .+++ .+|..+..+++|+.|++++| .+++. ++. +..++ +|++|++++| .++ +.+|..
T Consensus 141 ~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~ 220 (336)
T 2ast_B 141 NSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRR 220 (336)
T ss_dssp CTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhh
Confidence 999999999998 6765 36777888899999999999 88763 333 66778 8888888888 343 212211
Q ss_pred CCCccEEEcCCCC-CCCCchhhhcCCcccceeecccccccCCCcc---ccCCCCCcCeEecccC
Q 005898 257 PRGLVMAFLSNNS-FSGEIPKQYGQLNQLQQLDMSFNALRGMPPP---AIFSLPNISDLNLASN 316 (671)
Q Consensus 257 ~~~L~~l~l~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~L~~N 316 (671)
..+|+.+++++|. +++..+..+..+++|+.|++++|. +..+. .+..+++|+.|++++|
T Consensus 221 ~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 221 CPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc
Confidence 2344445555544 444444444455555555555543 11111 2344455555555544
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.8e-21 Score=202.52 Aligned_cols=207 Identities=22% Similarity=0.319 Sum_probs=173.7
Q ss_pred ecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCC
Q 005898 124 SLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLA 203 (671)
Q Consensus 124 ~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 203 (671)
.+..+.+...+ .+.++++|++|++++|.++. +| .+..+++|++|+|++|.+++. |. +..+++|++|++++|+++
T Consensus 25 ~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~ 98 (308)
T 1h6u_A 25 AAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLK 98 (308)
T ss_dssp HTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCS
T ss_pred HhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCC
Confidence 34444444432 35678899999999999974 55 688999999999999999864 44 999999999999999998
Q ss_pred CCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcc
Q 005898 204 GPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQ 283 (671)
Q Consensus 204 g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~ 283 (671)
+ +| .+..+++|+.|++++|.+++. +.+..+++|+.|++++|++++ +|. ++.+++
T Consensus 99 ~-~~-~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~----------------------~~~-l~~l~~ 152 (308)
T 1h6u_A 99 N-VS-AIAGLQSIKTLDLTSTQITDV-TPLAGLSNLQVLYLDLNQITN----------------------ISP-LAGLTN 152 (308)
T ss_dssp C-CG-GGTTCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECCSSCCCC----------------------CGG-GGGCTT
T ss_pred C-ch-hhcCCCCCCEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCc----------------------Ccc-ccCCCC
Confidence 5 44 689999999999999999874 558889999999998887653 222 788999
Q ss_pred cceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCC
Q 005898 284 LQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRG 363 (671)
Q Consensus 284 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~ 363 (671)
|+.|++++|++++.++ +..+++|+.|++++|++++..| +..+++|+.|++++|++++..| +..+++++.+++++
T Consensus 153 L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~ 226 (308)
T 1h6u_A 153 LQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226 (308)
T ss_dssp CCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEE
T ss_pred ccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccC
Confidence 9999999999998766 8999999999999999996544 7889999999999999997654 78899999999999
Q ss_pred CcCCC
Q 005898 364 NCLSS 368 (671)
Q Consensus 364 N~l~~ 368 (671)
|.+++
T Consensus 227 N~i~~ 231 (308)
T 1h6u_A 227 QTITN 231 (308)
T ss_dssp EEEEC
T ss_pred Ceeec
Confidence 98874
No 342
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.86 E-value=2.6e-24 Score=236.69 Aligned_cols=259 Identities=17% Similarity=0.180 Sum_probs=145.4
Q ss_pred cchhcccCCCCCCEEecccccccccCCcccc-----CCCCCCEEEcccCcCCCC----CCccCCCCCccCEEEccCCcCC
Q 005898 109 SFVTTLARLTSLRVLSLVSLGIWGSLPDKIH-----RLYSLEYLDLSSNFLFGS----VPPKISTMVKLQTLILDDNFFN 179 (671)
Q Consensus 109 ~~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~-----~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 179 (671)
.++..+.++++|++|+|++|.+.+..+..+. .+++|++|+|++|++++. ++..+..+++|++|+|++|.++
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 3455666666666666666666543333222 244566666666666542 2444555666666666666655
Q ss_pred CCCCcccC-----CCCCcCEEEcccccCCCC----CcccccCCCCCCEEEeccCcccccc-----CC-CCCCCCCCEEEC
Q 005898 180 NTIPNWFD-----SLPSLTFLSMRNNKLAGP----FPSSIQRISTLSDLDLSKNAISGSL-----PD-LSSLGSLNVLNL 244 (671)
Q Consensus 180 ~~~p~~~~-----~l~~L~~L~L~~N~l~g~----~p~~l~~l~~L~~L~Ls~N~l~g~~-----p~-~~~l~~L~~L~L 244 (671)
...+..+. .+++|++|++++|.+++. +|..+..+++|+.|++++|.++... +. +..+++|++|++
T Consensus 184 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L 263 (461)
T 1z7x_W 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWI 263 (461)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEEC
Confidence 43333332 245666666666666643 4555566666666666666665421 11 234566666666
Q ss_pred CCCCCCCC----CCCC---CCCccEEEcCCCCCCCCchhhhcC-----CcccceeecccccccCC----CccccCCCCCc
Q 005898 245 SDNKLDSN----LPKL---PRGLVMAFLSNNSFSGEIPKQYGQ-----LNQLQQLDMSFNALRGM----PPPAIFSLPNI 308 (671)
Q Consensus 245 s~N~l~~~----~p~~---~~~L~~l~l~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L 308 (671)
++|+++.. ++.. ..+|+.+++++|.+++..+..+.. .++|+.|++++|.+++. .+..+..+++|
T Consensus 264 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 343 (461)
T 1z7x_W 264 WECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFL 343 (461)
T ss_dssp TTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSC
T ss_pred cCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCc
Confidence 66666542 2221 245666666666665443333332 24666666666666654 23444555666
Q ss_pred CeEecccCcCcccCCcccCC-----CCCccEEECcCCcCcc----cCCCCCCCCCCCceeccCCCcCC
Q 005898 309 SDLNLASNKFSGSLPKNLNC-----GGKLVFFDISNNKLTG----GLPSCLSNESDKRVVKFRGNCLS 367 (671)
Q Consensus 309 ~~L~L~~N~l~g~~p~~~~~-----~~~L~~l~ls~N~l~g----~~p~~~~~~~~l~~l~l~~N~l~ 367 (671)
+.|+|++|.+++..+..+.. .++|+.|++++|.+++ .+|..+..+++++.+++++|.++
T Consensus 344 ~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 344 LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred cEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 66777666666543333221 4566667777666664 55655555666666666666554
No 343
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.6e-21 Score=190.72 Aligned_cols=163 Identities=22% Similarity=0.203 Sum_probs=136.3
Q ss_pred CCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEE
Q 005898 117 LTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLS 196 (671)
Q Consensus 117 l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 196 (671)
.++|++|+|++|.+.+..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 35799999999999887777899999999999999999876667789999999999999999977777789999999999
Q ss_pred cccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCch
Q 005898 197 MRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIP 275 (671)
Q Consensus 197 L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p 275 (671)
+++|++++..+..+..+++|+.|++++|.+++.++. +..+++|+.|++++|.+.+..
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~---------------------- 164 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC---------------------- 164 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT----------------------
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC----------------------
Confidence 999999977777789999999999999999987765 788999999999998765432
Q ss_pred hhhcCCcccceeecccccccCCCccccCCCCC
Q 005898 276 KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPN 307 (671)
Q Consensus 276 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 307 (671)
++|+.|+++.|+++|.+|..++.++.
T Consensus 165 ------~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 165 ------PGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ------TTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ------CCHHHHHHHHHhCCceeeccCccccC
Confidence 35666666666666666666655543
No 344
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=2.4e-21 Score=198.74 Aligned_cols=142 Identities=13% Similarity=0.152 Sum_probs=114.9
Q ss_pred HHHHHhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCch------------------hhHHHHHHHHHHHhcCCC
Q 005898 477 ELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK------------------YTVRNLKLRLDLLAKLRH 538 (671)
Q Consensus 477 ~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~------------------~~~~~~~~E~~~l~~l~H 538 (671)
.+......|+..+.||+|+||.||+|+..+|+.||||.+..... .....+.+|+++|++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 33444455667799999999999999997799999999964321 13567899999999999
Q ss_pred CCcccccceeecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccC
Q 005898 539 PHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (671)
Q Consensus 539 ~niv~l~g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrD 618 (671)
| +++.+++... ..++||||+++|+|.+ +.. .....++.|+++||+|||+. +|+|||
T Consensus 163 -~-~~v~~~~~~~---------~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrD 218 (282)
T 1zar_A 163 -G-LAVPKVYAWE---------GNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGD 218 (282)
T ss_dssp -T-SSSCCEEEEE---------TTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred -C-CCcCeEEecc---------ceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCC
Confidence 5 7777765432 4599999999999988 432 12347999999999999987 899999
Q ss_pred CCCCceeecCCCcEEEcccCCccccc
Q 005898 619 VKTNNILLNEHRIAKLSDYGLSIVSE 644 (671)
Q Consensus 619 lk~~NiLl~~~~~~ki~DfGla~~~~ 644 (671)
|||+||+++ ++.+||+|||+|+...
T Consensus 219 lkp~NILl~-~~~vkl~DFG~a~~~~ 243 (282)
T 1zar_A 219 LSQYNVLVS-EEGIWIIDFPQSVEVG 243 (282)
T ss_dssp CSTTSEEEE-TTEEEECCCTTCEETT
T ss_pred CCHHHEEEE-CCcEEEEECCCCeECC
Confidence 999999999 9999999999998765
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=1e-22 Score=214.38 Aligned_cols=245 Identities=18% Similarity=0.181 Sum_probs=199.8
Q ss_pred CCCEEecccccccccCCccccCC--CCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCC-CCcccCCCCCcCEE
Q 005898 119 SLRVLSLVSLGIWGSLPDKIHRL--YSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNT-IPNWFDSLPSLTFL 195 (671)
Q Consensus 119 ~L~~L~L~~n~l~g~~p~~~~~L--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 195 (671)
.++.|++++|.+. |..+..+ ++++.|++++|.+.+..|. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3788999998876 5667777 8999999999999876665 66899999999999999876 88889999999999
Q ss_pred EcccccCCCCCcccccCCCCCCEEEeccC-ccccc-cCC-CCCCCCCCEEECCCC-CCCCC-CCCC---CC-CccEEEcC
Q 005898 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKN-AISGS-LPD-LSSLGSLNVLNLSDN-KLDSN-LPKL---PR-GLVMAFLS 266 (671)
Q Consensus 196 ~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N-~l~g~-~p~-~~~l~~L~~L~Ls~N-~l~~~-~p~~---~~-~L~~l~l~ 266 (671)
++++|++++..|..++.+++|+.|++++| .+++. ++. +..+++|++|++++| .+++. ++.. .. +|+.++++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999999889999999999999999999 68752 444 678899999999999 88753 3321 34 89999999
Q ss_pred CC--CCC-CCchhhhcCCcccceeeccccc-ccCCCccccCCCCCcCeEecccCc-CcccCCcccCCCCCccEEECcCCc
Q 005898 267 NN--SFS-GEIPKQYGQLNQLQQLDMSFNA-LRGMPPPAIFSLPNISDLNLASNK-FSGSLPKNLNCGGKLVFFDISNNK 341 (671)
Q Consensus 267 ~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~~~~L~~l~ls~N~ 341 (671)
+| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|+.|++++|. ++......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 566 5678888999999999999999 787777789999999999999995 33222225778899999999998
Q ss_pred CcccCCCCCCCC-CCCceeccCCCcCCCCcC
Q 005898 342 LTGGLPSCLSNE-SDKRVVKFRGNCLSSNVQ 371 (671)
Q Consensus 342 l~g~~p~~~~~~-~~l~~l~l~~N~l~~~~~ 371 (671)
++. ..+..+ ..+..+++++|.+++..+
T Consensus 283 i~~---~~~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 283 VPD---GTLQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp SCT---TCHHHHHHHSTTSEESCCCSCCTTC
T ss_pred cCH---HHHHHHHhhCcceEEecccCccccC
Confidence 332 122222 236677789999887543
No 346
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.9e-20 Score=183.19 Aligned_cols=125 Identities=26% Similarity=0.338 Sum_probs=70.6
Q ss_pred EEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEccccc
Q 005898 122 VLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNK 201 (671)
Q Consensus 122 ~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 201 (671)
.++.+++++. .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|+
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 4455555553 234332 3466677777776665555556666666666666666665544555666666666666666
Q ss_pred CCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCC
Q 005898 202 LAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKL 249 (671)
Q Consensus 202 l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l 249 (671)
+++..+..+..+++|++|++++|.+++..+. +..+++|+.|++++|++
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 136 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCcc
Confidence 6644444455566666666666655544443 34455555555444443
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1.3e-20 Score=199.90 Aligned_cols=221 Identities=18% Similarity=0.122 Sum_probs=156.5
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCC-ccCCCCCccCE-EEccCCcCCCCCCcccCCCCCcCEE
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVP-PKISTMVKLQT-LILDDNFFNNTIPNWFDSLPSLTFL 195 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L 195 (671)
+++++|+|++|.|+...+..|.++++|++|+|++|++.+.+| ..|.++++|++ +.++.|+++...|..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 578999999999987666789999999999999999877666 46789998876 5677899998888999999999999
Q ss_pred EcccccCCCCCcccccCCCCCCEEEecc-CccccccCC-CCCCC-CCCEEECCCCCCCCCCCCCC--CCccEEEcCC-CC
Q 005898 196 SMRNNKLAGPFPSSIQRISTLSDLDLSK-NAISGSLPD-LSSLG-SLNVLNLSDNKLDSNLPKLP--RGLVMAFLSN-NS 269 (671)
Q Consensus 196 ~L~~N~l~g~~p~~l~~l~~L~~L~Ls~-N~l~g~~p~-~~~l~-~L~~L~Ls~N~l~~~~p~~~--~~L~~l~l~~-N~ 269 (671)
++++|++++..+..+....++..|+++. |.+....+. +..+. .++.|+|++|+++...+... ..+..+++++ |.
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCc
Confidence 9999999977666777788889999976 456544432 55553 68888898888875444432 2456666654 44
Q ss_pred CCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcC
Q 005898 270 FSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKL 342 (671)
Q Consensus 270 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l 342 (671)
++...++.|..+++|+.|||++|+|+..++..+.++ +.|.+.++.--..+| .+..+++|+.++++++.-
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L---~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENL---KKLRARSTYNLKKLP-TLEKLVALMEASLTYPSH 258 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTC---CEEECTTCTTCCCCC-CTTTCCSCCEEECSCHHH
T ss_pred ccCCCHHHhccCcccchhhcCCCCcCccChhhhccc---hHhhhccCCCcCcCC-CchhCcChhhCcCCCCcc
Confidence 443333456777777777777777776666544433 333333333223455 355666666676665543
No 348
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.84 E-value=8.6e-24 Score=232.54 Aligned_cols=258 Identities=20% Similarity=0.191 Sum_probs=132.1
Q ss_pred chhcccCCCCCCEEecccccccccCCccc-cCCC----CCCEEEcccCcCCC----CCCccCCCCCccCEEEccCCcCCC
Q 005898 110 FVTTLARLTSLRVLSLVSLGIWGSLPDKI-HRLY----SLEYLDLSSNFLFG----SVPPKISTMVKLQTLILDDNFFNN 180 (671)
Q Consensus 110 ~~~~l~~l~~L~~L~L~~n~l~g~~p~~~-~~L~----~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~ 180 (671)
++..+..+++|++|+|++|.+....+..+ ..+. +|++|+|++|+++. .+|..+..+++|++|+|++|.++.
T Consensus 48 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 127 (461)
T 1z7x_W 48 ISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 127 (461)
T ss_dssp HHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred HHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCch
Confidence 44555666666666666666654333222 2333 46666666666652 345666666666666666666554
Q ss_pred CCCccc-----CCCCCcCEEEcccccCCCC----CcccccCCCCCCEEEeccCccccccCC-C-----CCCCCCCEEECC
Q 005898 181 TIPNWF-----DSLPSLTFLSMRNNKLAGP----FPSSIQRISTLSDLDLSKNAISGSLPD-L-----SSLGSLNVLNLS 245 (671)
Q Consensus 181 ~~p~~~-----~~l~~L~~L~L~~N~l~g~----~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~-----~~l~~L~~L~Ls 245 (671)
..+..+ ...++|++|++++|++++. ++..+..+++|+.|++++|.++...+. + ...++|+.|+++
T Consensus 128 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 207 (461)
T 1z7x_W 128 AGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLE 207 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEcc
Confidence 322222 2244566666666666542 244445556666666666665543221 1 124456666666
Q ss_pred CCCCCCC----CCCC---CCCccEEEcCCCCCCCCc-----hhhhcCCcccceeecccccccCC----CccccCCCCCcC
Q 005898 246 DNKLDSN----LPKL---PRGLVMAFLSNNSFSGEI-----PKQYGQLNQLQQLDMSFNALRGM----PPPAIFSLPNIS 309 (671)
Q Consensus 246 ~N~l~~~----~p~~---~~~L~~l~l~~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~ 309 (671)
+|.+++. ++.. ..+|+.+++++|.++... +..+..+++|++|++++|.++.. ++..+..+++|+
T Consensus 208 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 287 (461)
T 1z7x_W 208 SCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLK 287 (461)
T ss_dssp TSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCC
T ss_pred CCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcc
Confidence 6655542 1211 245556666666554321 11222455566666666655543 233444455566
Q ss_pred eEecccCcCcccCCcccC-----CCCCccEEECcCCcCccc----CCCCCCCCCCCceeccCCCcCC
Q 005898 310 DLNLASNKFSGSLPKNLN-----CGGKLVFFDISNNKLTGG----LPSCLSNESDKRVVKFRGNCLS 367 (671)
Q Consensus 310 ~L~L~~N~l~g~~p~~~~-----~~~~L~~l~ls~N~l~g~----~p~~~~~~~~l~~l~l~~N~l~ 367 (671)
.|+|++|.+++..+..+. ..++|+.|++++|.+++. +|..+..+++++.+++++|.++
T Consensus 288 ~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 354 (461)
T 1z7x_W 288 ELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLE 354 (461)
T ss_dssp EEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCH
T ss_pred eEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccc
Confidence 666666655433222221 123555666666655543 3334444455555565555544
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=7.8e-20 Score=193.75 Aligned_cols=236 Identities=17% Similarity=0.127 Sum_probs=178.6
Q ss_pred CEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCC-cccCCCCCcCE-EEcc
Q 005898 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIP-NWFDSLPSLTF-LSMR 198 (671)
Q Consensus 121 ~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~ 198 (671)
++++-++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|+. +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 46777888885 577666 3689999999999986556789999999999999999987776 46889999876 6667
Q ss_pred cccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCC-CCCCCCCCC----CCCCccEEEcCCCCCCC
Q 005898 199 NNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSD-NKLDSNLPK----LPRGLVMAFLSNNSFSG 272 (671)
Q Consensus 199 ~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~-N~l~~~~p~----~~~~L~~l~l~~N~l~~ 272 (671)
.|+++...|..|..+++|++|++++|.+++..+. +....++..|++.+ |++....+. ....++.+++++|+++.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 8999987788999999999999999999876553 45566788888866 455443332 23467789999999984
Q ss_pred CchhhhcCCcccceeecc-cccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCC
Q 005898 273 EIPKQYGQLNQLQQLDMS-FNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLS 351 (671)
Q Consensus 273 ~~p~~~~~l~~L~~L~Ls-~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~ 351 (671)
+|.......+|+.|+++ +|.++.+++..|..+++|+.|+|++|+++...+..+ .+|+.|.+.++.--..+|. +.
T Consensus 169 -i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP~-l~ 243 (350)
T 4ay9_X 169 -IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLPT-LE 243 (350)
T ss_dssp -ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCCC-TT
T ss_pred -CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCCC-ch
Confidence 55555566789999987 477887777788899999999999999985444444 4555555554433336663 66
Q ss_pred CCCCCceeccCCC
Q 005898 352 NESDKRVVKFRGN 364 (671)
Q Consensus 352 ~~~~l~~l~l~~N 364 (671)
++++|+.+++.++
T Consensus 244 ~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 244 KLVALMEASLTYP 256 (350)
T ss_dssp TCCSCCEEECSCH
T ss_pred hCcChhhCcCCCC
Confidence 7777877776543
No 350
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.81 E-value=4.7e-21 Score=221.93 Aligned_cols=232 Identities=14% Similarity=0.139 Sum_probs=112.8
Q ss_pred ChHHHHHHHHHHhcCCCC--CCCCCccCCCCCCCCCCCCCccceEeCCCCEeEEEecCCCCCCCCCCCCcccccccCCCc
Q 005898 27 QSSQTQVLLQLRKHLEYP--KQLEIWINHGADFCYISSSTQVNITCQDNFITELKIIGDKPSNVGNFDGFASANASLSEN 104 (671)
Q Consensus 27 ~~~~~~~Ll~~k~~~~~~--~~l~~W~~~~~~~C~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~l~~n 104 (671)
...++++|+++..+...+ ..-..|.......+.|. ++++...+++.+++.+.....
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~s~~~~~~l~L~~n~~~~----------------- 187 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTAT-----NSAVSTPLTPKIELFANGKDE----------------- 187 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCC-----CceecCCccceEEeeCCCCCc-----------------
Confidence 456788999998765322 12334643323445553 456655667777665443221
Q ss_pred cCCCcchhcccCCCC-----CCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCC
Q 005898 105 FSIDSFVTTLARLTS-----LRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (671)
Q Consensus 105 ~~~~~~~~~l~~l~~-----L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (671)
.+..+..... +..++++.|.+. ..|+.+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+
T Consensus 188 -----~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~ 260 (727)
T 4b8c_D 188 -----ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT 260 (727)
T ss_dssp ----------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS
T ss_pred -----chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc
Confidence 1111111111 222233334433 45677888888888888888886 67777778888888888888888
Q ss_pred CCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q 005898 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRG 259 (671)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 259 (671)
.+|..|++|++|++|+|++|+|+ .+|..|+.+++|++|+|++|.|+..++.++.+++|+.|+|++|.|++
T Consensus 261 -~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~-------- 330 (727)
T 4b8c_D 261 -ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEK-------- 330 (727)
T ss_dssp -CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCS--------
T ss_pred -ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCC--------
Confidence 77888888888888888888887 67888888888888888888887444457777777777777666543
Q ss_pred ccEEEcCCCCCCCCchhhhcCCcc-cceeecccccccCCCccccCCCCCcCeEecccC
Q 005898 260 LVMAFLSNNSFSGEIPKQYGQLNQ-LQQLDMSFNALRGMPPPAIFSLPNISDLNLASN 316 (671)
Q Consensus 260 L~~l~l~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 316 (671)
.+|..+..+.. +..|+|++|.+++.+|.. |..|++++|
T Consensus 331 -------------~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 331 -------------QFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred -------------CChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 45555544321 223667777777666643 344455555
No 351
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=3.3e-19 Score=177.17 Aligned_cols=134 Identities=28% Similarity=0.280 Sum_probs=123.2
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 78999999999999999999999999999999999997666677899999999999999999887788999999999999
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCC
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSN 252 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~ 252 (671)
++|+++ .+|..+..+++|+.|+|++|++++..+. +..+++|+.|++++|.+...
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 999999 7899999999999999999999977764 78899999999999987653
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=3.9e-20 Score=209.23 Aligned_cols=174 Identities=26% Similarity=0.353 Sum_probs=108.3
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcC
Q 005898 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (671)
Q Consensus 114 l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (671)
+..|++|+.|+|++|.+.. +| .+..|++|+.|+|++|++++..| +..+++|+.|+|++|.+++ +| .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 4455666666666666643 33 36666666666666666654333 6666666666666666654 22 466666666
Q ss_pred EEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCC
Q 005898 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGE 273 (671)
Q Consensus 194 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~ 273 (671)
.|+|++|++++ + +.+..+++|+.|+|++|.+++. +.+..+++|+.|+|++|+++ +.
T Consensus 113 ~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~---------------------~~ 168 (605)
T 1m9s_A 113 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQIS---------------------DI 168 (605)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCC---------------------CC
T ss_pred EEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCC---------------------Cc
Confidence 66666666654 2 3456666666666666666654 45555666666655555443 33
Q ss_pred chhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCccc
Q 005898 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGS 321 (671)
Q Consensus 274 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ 321 (671)
.| +..+++|+.|+|++|+|++. +.+..+++|+.|+|++|++++.
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred hh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 33 66777788888888888775 2477778888888888877754
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.4e-19 Score=204.72 Aligned_cols=127 Identities=30% Similarity=0.411 Sum_probs=57.5
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcC
Q 005898 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (671)
Q Consensus 114 l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (671)
+..|++|+.|+|++|.+.+..| +.++++|+.|+|++|.+++ +| .+..+++|+.|+|++|.+++ + +.+..|++|+
T Consensus 61 l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~ 134 (605)
T 1m9s_A 61 IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLE 134 (605)
T ss_dssp GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCS
T ss_pred HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccC
Confidence 4444444444444444443322 4444444444444444432 22 34444444444444444443 1 2344444444
Q ss_pred EEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCC
Q 005898 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKL 249 (671)
Q Consensus 194 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l 249 (671)
.|+|++|++++. ..+..+++|+.|+|++|.+++.+| +..+++|+.|+|++|++
T Consensus 135 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 135 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp EEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred EEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCC
Confidence 444444444432 334444444444444444444433 44444444444444433
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=2.1e-19 Score=185.38 Aligned_cols=123 Identities=27% Similarity=0.333 Sum_probs=55.6
Q ss_pred CCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEE
Q 005898 116 RLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFL 195 (671)
Q Consensus 116 ~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (671)
.+++|+.|++++|.+... | .+..+++|++|+|++|++++..| +.++++|++|+|++|.+++ +| .+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 444555555555554322 2 24455555555555555543222 4455555555555555443 12 24444555555
Q ss_pred EcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCC
Q 005898 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDN 247 (671)
Q Consensus 196 ~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N 247 (671)
++++|++++. +.+..+++|+.|++++|.+++. +.+..+++|+.|++++|
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N 166 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDN 166 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSS
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCC
Confidence 5555544431 2344444444444444444432 33344444444444433
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=2e-19 Score=185.54 Aligned_cols=188 Identities=23% Similarity=0.331 Sum_probs=148.8
Q ss_pred CEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccc
Q 005898 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN 200 (671)
Q Consensus 121 ~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 200 (671)
..+.+..+.+.+.. .+..+++|++|++++|.+.. +| .+..+++|++|+|++|.+++..| +.++++|++|++++|
T Consensus 27 ~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 27 IKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC
Confidence 33445555554433 25678899999999999864 44 48889999999999999987544 899999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcC
Q 005898 201 KLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQ 280 (671)
Q Consensus 201 ~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~ 280 (671)
++++ + +.+..+++|+.|++++|.+++. +.+..+++|+.|++++|++++ + ..++.
T Consensus 101 ~l~~-~-~~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~----------------------~-~~l~~ 154 (291)
T 1h6t_A 101 KVKD-L-SSLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITD----------------------I-TVLSR 154 (291)
T ss_dssp CCCC-G-GGGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCC----------------------C-GGGGG
T ss_pred cCCC-C-hhhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCc----------------------c-hhhcc
Confidence 9985 3 3488999999999999999864 678888899999888887653 2 35677
Q ss_pred CcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcc
Q 005898 281 LNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTG 344 (671)
Q Consensus 281 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g 344 (671)
+++|+.|++++|++++.++ +..+++|+.|++++|.+++ +| .+..+++|+.|++++|.++.
T Consensus 155 l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 155 LTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 8888888888888888765 7788888888888888875 34 37778888888888888874
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=4.9e-19 Score=188.43 Aligned_cols=175 Identities=25% Similarity=0.292 Sum_probs=108.5
Q ss_pred CEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCC-CCCccCEEEccCCcCCCCCCcccCCCCCcCEEEccc
Q 005898 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKIS-TMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRN 199 (671)
Q Consensus 121 ~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (671)
+.++++++++. .+|..+. ..++.|+|++|+|++..+..+. ++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 35566666664 3454443 3466777777777665555565 677777777777777666666677777777777777
Q ss_pred ccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhh
Q 005898 200 NKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQY 278 (671)
Q Consensus 200 N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~ 278 (671)
|++++..+..|..+++|+.|+|++|.+++..|. +..+++|+.|+|++|++++.. +..|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~---------------------~~~~ 156 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP---------------------VELI 156 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC---------------------GGGT
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC---------------------HHHh
Confidence 777655555666777777777777777665543 566667777666666654311 1112
Q ss_pred ---cCCcccceeecccccccCCCccccCCCCC--cCeEecccCcCc
Q 005898 279 ---GQLNQLQQLDMSFNALRGMPPPAIFSLPN--ISDLNLASNKFS 319 (671)
Q Consensus 279 ---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~ 319 (671)
..+++|+.|+|++|+|++.++..+..+++ ++.|+|++|.+.
T Consensus 157 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 157 KDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp C----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 44566666677777666666666666655 366666666665
No 357
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=2.8e-19 Score=181.07 Aligned_cols=139 Identities=13% Similarity=0.140 Sum_probs=105.9
Q ss_pred CCcCceeccCCceEEEEEEE-cCCcE--EEEEEccCCch------------------------hhHHHHHHHHHHHhcCC
Q 005898 485 FDMSAIMGEGSYGKLYKGRL-ENGTS--VAIRCLPSSKK------------------------YTVRNLKLRLDLLAKLR 537 (671)
Q Consensus 485 f~~~~~iG~G~~g~Vy~~~~-~~g~~--vAvK~l~~~~~------------------------~~~~~~~~E~~~l~~l~ 537 (671)
|+..+.||+|+||.||+|+. .+|+. ||||+++.... .....+.+|++.|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999997 68999 99998643211 11236889999999999
Q ss_pred CCCcccccceeecCCCCCCcccceEEEEEecCCC-C----ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhc-CCCC
Q 005898 538 HPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSN-G----NFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLH-TGVI 611 (671)
Q Consensus 538 H~niv~l~g~~~~~~~~~~~~~~~~~Lv~Ey~~~-G----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH-~~~~ 611 (671)
|+++.....+... ..+|||||+.+ | +|.++... .++.....++.+++.|+.||| +.
T Consensus 129 ~~~i~~p~~~~~~----------~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~-- 190 (258)
T 1zth_A 129 EAGVSVPQPYTYM----------KNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA-- 190 (258)
T ss_dssp HTTCCCCCEEEEE----------TTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS--
T ss_pred hCCCCCCeEEEcC----------CCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC--
Confidence 8875332222221 35899999942 4 56555432 224456789999999999999 76
Q ss_pred CCccccCCCCCceeecCCCcEEEcccCCccccc
Q 005898 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE 644 (671)
Q Consensus 612 ~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~ 644 (671)
+|+||||||+|||+++ .++|+|||+|+..+
T Consensus 191 -givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 191 -ELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp -CEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred -CEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 8999999999999998 99999999998765
No 358
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=3.6e-18 Score=169.68 Aligned_cols=151 Identities=28% Similarity=0.353 Sum_probs=84.9
Q ss_pred EEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCc
Q 005898 146 YLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNA 225 (671)
Q Consensus 146 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~ 225 (671)
.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|..+++|+.|+|++|+
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 3444444442 3343332 445555555555555555555555555555555555543333344555555555555555
Q ss_pred cccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCC
Q 005898 226 ISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFS 304 (671)
Q Consensus 226 l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 304 (671)
+++..+. +..+++|++|+|++|+++ .+|..+..+++|+.|+|++|++++.++..+..
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~----------------------~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 157 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT----------------------ELPRGIERLTHLTHLALDQNQLKSIPHGAFDR 157 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC----------------------SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred CCccChhHhCcchhhCeEeccCCccc----------------------ccCcccccCCCCCEEECCCCcCCccCHHHHhC
Confidence 5544443 455566666665555443 34555566667777777777777766666666
Q ss_pred CCCcCeEecccCcCccc
Q 005898 305 LPNISDLNLASNKFSGS 321 (671)
Q Consensus 305 l~~L~~L~L~~N~l~g~ 321 (671)
+++|+.|+|++|.+++.
T Consensus 158 l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 158 LSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CTTCCEEECTTSCBCTT
T ss_pred CCCCCEEEeeCCCccCC
Confidence 77777777777776644
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=7.9e-19 Score=186.84 Aligned_cols=176 Identities=26% Similarity=0.249 Sum_probs=146.3
Q ss_pred CEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccC-CCCCcCEEEcccccCCCCCcccccCCCCCCEEEecc
Q 005898 145 EYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFD-SLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSK 223 (671)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~ 223 (671)
+.+++++|.++ .+|..+. ..++.|+|++|.|++..+..+. ++++|++|+|++|++++..|..|..+++|+.|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 68999999996 5777664 4589999999999988888887 999999999999999987778899999999999999
Q ss_pred CccccccCC-CCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCcccc
Q 005898 224 NAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAI 302 (671)
Q Consensus 224 N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 302 (671)
|++++..+. +..+++|+.|+|++|++++ ..|..|..+++|+.|+|++|+|++.++..+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~---------------------~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 156 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVV---------------------VDRNAFEDMAQLQKLYLSQNQISRFPVELI 156 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCE---------------------ECTTTTTTCTTCCEEECCSSCCCSCCGGGT
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccE---------------------ECHHHhCCcccCCEEECCCCcCCeeCHHHh
Confidence 999887664 7888999998888877653 446778889999999999999999888766
Q ss_pred ---CCCCCcCeEecccCcCcccCCcccCCCCC--ccEEECcCCcCcc
Q 005898 303 ---FSLPNISDLNLASNKFSGSLPKNLNCGGK--LVFFDISNNKLTG 344 (671)
Q Consensus 303 ---~~l~~L~~L~L~~N~l~g~~p~~~~~~~~--L~~l~ls~N~l~g 344 (671)
..+++|+.|+|++|+|++..+..+..+.. ++.|+|++|.++.
T Consensus 157 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 157 KDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp C----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 56899999999999999655566666665 4778888888864
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=9.4e-22 Score=221.13 Aligned_cols=203 Identities=19% Similarity=0.174 Sum_probs=119.8
Q ss_pred cCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCE
Q 005898 115 ARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTF 194 (671)
Q Consensus 115 ~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (671)
..+++|+.|+|++|.+. .+|+++++|++|+.|++++|.....+|. .+..+.+.+.+|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhccc
Confidence 44555666666666653 4566666666666666554431000000 00000133444555555555555
Q ss_pred EE-cccc-------------cCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCc
Q 005898 195 LS-MRNN-------------KLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGL 260 (671)
Q Consensus 195 L~-L~~N-------------~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L 260 (671)
|+ ++.| .++. +|. ..|+.|+|++|.+++ +|.++.+++|+.|+|++|++
T Consensus 414 L~~l~~n~~~~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~~~~l~~L~~L~Ls~N~l----------- 475 (567)
T 1dce_A 414 VDPMRAAYLDDLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRL----------- 475 (567)
T ss_dssp HCGGGHHHHHHHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCCGGGGTTCCEEECCSSCC-----------
T ss_pred Ccchhhcccchhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcCccccccCcEeecCcccc-----------
Confidence 55 3444 3321 111 135566666666654 34455555555555555544
Q ss_pred cEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccC-CcccCCCCCccEEECcC
Q 005898 261 VMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSL-PKNLNCGGKLVFFDISN 339 (671)
Q Consensus 261 ~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~~~~L~~l~ls~ 339 (671)
+ .+|..++.+++|+.|+|++|+|++. | .+..+++|+.|+|++|++++.. |..+..+++|+.|+|++
T Consensus 476 ----------~-~lp~~~~~l~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~ 542 (567)
T 1dce_A 476 ----------R-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQG 542 (567)
T ss_dssp ----------C-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTT
T ss_pred ----------c-ccchhhhcCCCCCEEECCCCCCCCC-c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecC
Confidence 4 5677788888888888888888874 4 6888888888888888888776 88888888888888888
Q ss_pred CcCcccCCCCC---CCCCCCceec
Q 005898 340 NKLTGGLPSCL---SNESDKRVVK 360 (671)
Q Consensus 340 N~l~g~~p~~~---~~~~~l~~l~ 360 (671)
|.+++.+|... ..+++|+.|+
T Consensus 543 N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 543 NSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CcCCCCccHHHHHHHHCcccCccC
Confidence 88887655321 1245565553
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=3.7e-18 Score=168.48 Aligned_cols=131 Identities=18% Similarity=0.263 Sum_probs=66.5
Q ss_pred CEEEcccccCCCCCc-ccccCCCCCCEEEeccCccccccC-CCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCC
Q 005898 193 TFLSMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSF 270 (671)
Q Consensus 193 ~~L~L~~N~l~g~~p-~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l 270 (671)
++|+|++|++++..| ..|..+++|+.|+|++|.+++..+ .+..+++|++|+|++|+++
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~-------------------- 94 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE-------------------- 94 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC--------------------
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccC--------------------
Confidence 344444444443322 223444444444444444444433 2444444444444444332
Q ss_pred CCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcc
Q 005898 271 SGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTG 344 (671)
Q Consensus 271 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g 344 (671)
+..|..|..+++|++|+|++|++++.+|..+..+++|+.|+|++|++++..|..+..+.+|+.|++++|.+++
T Consensus 95 -~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 95 -NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp -CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred -ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 2233445555555555555555555555555556666666666666665555555555666666666665554
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=2.9e-18 Score=169.27 Aligned_cols=132 Identities=24% Similarity=0.333 Sum_probs=57.3
Q ss_pred ccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECC
Q 005898 167 KLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLS 245 (671)
Q Consensus 167 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls 245 (671)
+|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|.++...+. +..+++|++|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 344444444444433333444444444444444444433344444444444444444444432222 2334444444444
Q ss_pred CCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCc
Q 005898 246 DNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (671)
Q Consensus 246 ~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (671)
+|++++ ..|..|..+++|+.|+|++|++++.++..+..+++|+.|+|++|.+.
T Consensus 113 ~N~l~~---------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 113 ANKINC---------------------LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp SSCCCC---------------------CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCE---------------------eCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 333321 22333444445555555555555555444555555555555555443
No 363
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=9.8e-20 Score=210.91 Aligned_cols=219 Identities=20% Similarity=0.155 Sum_probs=120.1
Q ss_pred CCCCEEecccccccccCCccccCCCCCC-----EEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLE-----YLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~-----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (671)
+.++.|+|..|.+.. +|..+.....|. .++++.|++. ..|..+..+.+|+.|+|++|.+. .+|..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 457778888888765 343332222222 2333344443 45778889999999999999988 778778889999
Q ss_pred CEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCC
Q 005898 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSG 272 (671)
Q Consensus 193 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~ 272 (671)
++|+|++|.|+ .+|..|+++++|+.|+|++|.|+..++.++.|++|++|+|++|.|+
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~---------------------- 306 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT---------------------- 306 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC----------------------
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC----------------------
Confidence 99999999998 8898899999999999999999844445888888888888887664
Q ss_pred CchhhhcCCcccceeecccccccCCCccccCCCCC-cCeEecccCcCcccCCcccCCCCCccEEECcCC--------cCc
Q 005898 273 EIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPN-ISDLNLASNKFSGSLPKNLNCGGKLVFFDISNN--------KLT 343 (671)
Q Consensus 273 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N--------~l~ 343 (671)
.+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|.. |..|+++.| .++
T Consensus 307 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~ 380 (727)
T 4b8c_D 307 TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQ 380 (727)
T ss_dssp CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------------------------
T ss_pred ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCcc
Confidence 56777999999999999999999999988765432 235889999999999975 455677766 344
Q ss_pred ccCCCCCCCCCCCceeccCCCcCCC
Q 005898 344 GGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 344 g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
+..+..+.++..+....++.|.+.+
T Consensus 381 ~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 381 QSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ---------------------CCCG
T ss_pred ccccchhhcccccceeeeecccccc
Confidence 4444444556666677788887764
No 364
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1e-18 Score=169.33 Aligned_cols=130 Identities=20% Similarity=0.246 Sum_probs=65.5
Q ss_pred cCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCE
Q 005898 115 ARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTF 194 (671)
Q Consensus 115 ~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (671)
+.+++|+.|++++|.+. .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|.+++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44555556666655554 344 4555555556665555442 2234555555555555555555544555555555555
Q ss_pred EEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCC
Q 005898 195 LSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNK 248 (671)
Q Consensus 195 L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~ 248 (671)
|++++|++++..|..+..+++|+.|++++|.+.+.+|.+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCC
Confidence 555555555444555555555555555555422223334444444444444433
No 365
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=4.9e-18 Score=167.58 Aligned_cols=134 Identities=22% Similarity=0.257 Sum_probs=123.6
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
++|+.|+|++|.+.+..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|.++...+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 57999999999999888889999999999999999999888999999999999999999999766667899999999999
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCC
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDS 251 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~ 251 (671)
++|++++..|..|..+++|+.|+|++|.+++..+. +..+++|+.|+|++|.+..
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99999998899999999999999999999988775 7889999999999998753
No 366
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=5.2e-18 Score=167.41 Aligned_cols=134 Identities=23% Similarity=0.245 Sum_probs=121.8
Q ss_pred CCCEEecccccccccCC-ccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 119 SLRVLSLVSLGIWGSLP-DKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 119 ~L~~L~L~~n~l~g~~p-~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
.+++|+|++|.+.+..| ..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 46899999999988865 45899999999999999999888889999999999999999999888888999999999999
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCC
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSN 252 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~ 252 (671)
++|++++..|..|..+++|+.|+|++|++++..|. +..+++|+.|+|++|.+...
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 99999998899999999999999999999988764 78899999999999987653
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1.1e-18 Score=177.06 Aligned_cols=171 Identities=22% Similarity=0.292 Sum_probs=110.2
Q ss_pred CCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEE
Q 005898 116 RLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFL 195 (671)
Q Consensus 116 ~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (671)
++.++..++++.|.+.+.. .+.++++|++|++++|.++ .+| .+..+++|++|+|++|.+++..| +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3555666777777775433 4677778888888888775 345 57777777777777777775433 7777777777
Q ss_pred EcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCch
Q 005898 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIP 275 (671)
Q Consensus 196 ~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p 275 (671)
++++|++++ +|.... ++|+.|++++|.+++ ++.+..+++|+.|++++|++++ +|
T Consensus 91 ~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~~l~~l~~L~~L~Ls~N~i~~----------------------~~ 144 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TDSLIHLKNLEILSIRNNKLKS----------------------IV 144 (263)
T ss_dssp ECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SGGGTTCTTCCEEECTTSCCCB----------------------CG
T ss_pred ECCCCccCC-cCcccc--CcccEEEccCCccCC-ChhhcCcccccEEECCCCcCCC----------------------Ch
Confidence 777777764 343222 667777777777765 3456666666666666665542 22
Q ss_pred hhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCccc
Q 005898 276 KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGS 321 (671)
Q Consensus 276 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ 321 (671)
.++.+++|+.|++++|++++. ..+..+++|+.|++++|++++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 355566666666666666665 3455666666666666666543
No 368
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=4.7e-18 Score=164.65 Aligned_cols=154 Identities=19% Similarity=0.305 Sum_probs=112.0
Q ss_pred cccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCC
Q 005898 137 KIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTL 216 (671)
Q Consensus 137 ~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L 216 (671)
..+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3467788899999999886 566 6888888888888888554 34577888888888888888887777778888888
Q ss_pred CEEEeccCccccccC-CCCCCCCCCEEECCCCC-CCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccc
Q 005898 217 SDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNK-LDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNAL 294 (671)
Q Consensus 217 ~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 294 (671)
+.|++++|.+++..| .+..+++|++|++++|+ ++ .+| .+..+++|+.|++++|.+
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~----------------------~~~-~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT----------------------DIM-PLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC----------------------CCG-GGGGCSSCCEEECTTBCC
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc----------------------ccH-hhcCCCCCCEEECCCCCC
Confidence 888888888876444 36777777777777775 32 233 466677777777777777
Q ss_pred cCCCccccCCCCCcCeEecccCcCc
Q 005898 295 RGMPPPAIFSLPNISDLNLASNKFS 319 (671)
Q Consensus 295 ~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (671)
++.+ .+..+++|+.|++++|++.
T Consensus 172 ~~~~--~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 172 HDYR--GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCCT--TGGGCSSCCEEEECBC---
T ss_pred cChH--HhccCCCCCEEEeeCcccC
Confidence 7654 4666777777777777664
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=4.8e-18 Score=172.42 Aligned_cols=171 Identities=18% Similarity=0.268 Sum_probs=128.7
Q ss_pred CCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEE
Q 005898 140 RLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDL 219 (671)
Q Consensus 140 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L 219 (671)
++.++..++++.|.+++ ++ .+..+++|++|++++|.++ .+| .+..+++|++|++++|++++. |. +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEE
Confidence 45667777888888764 33 5677788888888888777 345 577778888888888887754 33 7777788888
Q ss_pred EeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCc
Q 005898 220 DLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPP 299 (671)
Q Consensus 220 ~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 299 (671)
+|++|++++ +|.+.. ++|+.|++++|+++ + +| .++.+++|+.|++++|++++.+
T Consensus 91 ~L~~N~l~~-l~~~~~-~~L~~L~L~~N~l~---------------------~-~~-~l~~l~~L~~L~Ls~N~i~~~~- 144 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS-ACLSRLFLDNNELR---------------------D-TD-SLIHLKNLEILSIRNNKLKSIV- 144 (263)
T ss_dssp ECCSSCCSC-CTTCCC-SSCCEEECCSSCCS---------------------B-SG-GGTTCTTCCEEECTTSCCCBCG-
T ss_pred ECCCCccCC-cCcccc-CcccEEEccCCccC---------------------C-Ch-hhcCcccccEEECCCCcCCCCh-
Confidence 888887775 333333 66666666666554 2 23 5788899999999999999874
Q ss_pred cccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCccc
Q 005898 300 PAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGG 345 (671)
Q Consensus 300 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~ 345 (671)
.+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 588899999999999999876 6678888999999999998855
No 370
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.70 E-value=1.2e-19 Score=205.94 Aligned_cols=117 Identities=15% Similarity=0.106 Sum_probs=67.7
Q ss_pred CCCcccCCCCCcCEEEcccccCCCCCc-ccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCC-----------C
Q 005898 181 TIPNWFDSLPSLTFLSMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSD-----------N 247 (671)
Q Consensus 181 ~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~-----------N 247 (671)
.+|..+..+++|++|++++|.+++..+ ..+..+++|+.|+++++...+.++. ...+++|+.|++++ |
T Consensus 284 ~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~ 363 (592)
T 3ogk_B 284 EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEG 363 (592)
T ss_dssp TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTC
T ss_pred HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccC
Confidence 456667778889999999988765433 3357788888888873322223333 24566777777773 4
Q ss_pred CCCCC-CCC---CCCCccEEEcCCCCCCCCchhhhcC-Ccccceeecc----cccccCC
Q 005898 248 KLDSN-LPK---LPRGLVMAFLSNNSFSGEIPKQYGQ-LNQLQQLDMS----FNALRGM 297 (671)
Q Consensus 248 ~l~~~-~p~---~~~~L~~l~l~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~ 297 (671)
.++.. ++. ...+|+.++++.|.+++..+..++. +++|+.|+++ .|.+++.
T Consensus 364 ~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~ 422 (592)
T 3ogk_B 364 LVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDL 422 (592)
T ss_dssp CCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSC
T ss_pred ccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCc
Confidence 44321 111 1245556666556665555555543 5556666664 4455543
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.69 E-value=6.5e-19 Score=198.00 Aligned_cols=166 Identities=17% Similarity=0.224 Sum_probs=94.0
Q ss_pred CcchhcccCCCCCCEEeccccc-------------ccccCCccccCCCCCCEEE-cccCcCCCCCCc------cCCC--C
Q 005898 108 DSFVTTLARLTSLRVLSLVSLG-------------IWGSLPDKIHRLYSLEYLD-LSSNFLFGSVPP------KIST--M 165 (671)
Q Consensus 108 ~~~~~~l~~l~~L~~L~L~~n~-------------l~g~~p~~~~~L~~L~~L~-Ls~N~l~~~~p~------~~~~--l 165 (671)
..+|.++++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.. ++. .+.. .
T Consensus 362 ~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~-L~~l~l~~n~i~~l~~ 440 (567)
T 1dce_A 362 TVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD-LRSKFLLENSVLKMEY 440 (567)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch-hhhhhhhcccccccCc
Confidence 4789999999999999997775 5677888889999999998 66664320 000 0000 0
Q ss_pred CccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECC
Q 005898 166 VKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLS 245 (671)
Q Consensus 166 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls 245 (671)
..|+.|+|++|.+++ +|. ++++++|+.|+|++|+++ .+|..++.+++|+.|+|++|.+++ +|.++.+++|+.|+|+
T Consensus 441 ~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 441 ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLC 516 (567)
T ss_dssp TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECC
T ss_pred cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECC
Confidence 124555555555553 343 555555555555555555 445555555555555555555554 3344445555444444
Q ss_pred CCCCCCCCCCCCCCccEEEcCCCCCCCCc-hhhhcCCcccceeecccccccCCCc
Q 005898 246 DNKLDSNLPKLPRGLVMAFLSNNSFSGEI-PKQYGQLNQLQQLDMSFNALRGMPP 299 (671)
Q Consensus 246 ~N~l~~~~p~~~~~L~~l~l~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~ 299 (671)
+|+++ +.. |..++.+++|+.|+|++|.+++.+|
T Consensus 517 ~N~l~---------------------~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQ---------------------QSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCC---------------------SSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCC---------------------CCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 44332 222 4455555555555555555555544
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=9.8e-17 Score=154.69 Aligned_cols=129 Identities=25% Similarity=0.300 Sum_probs=109.1
Q ss_pred CEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCc-cCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEccc
Q 005898 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPP-KISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRN 199 (671)
Q Consensus 121 ~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (671)
+.+++++|++ +.+|..+.. +|++|+|++|++++..|. .|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 6788888888 567776654 889999999999766654 488899999999999999988888999999999999999
Q ss_pred ccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCC
Q 005898 200 NKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSN 252 (671)
Q Consensus 200 N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~ 252 (671)
|++++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 999988888888999999999999999988775 77888899998888887653
No 373
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.69 E-value=1.6e-19 Score=204.99 Aligned_cols=254 Identities=15% Similarity=0.098 Sum_probs=173.4
Q ss_pred cccCCCCCCEEeccccccccc----CCccccCCCCCCEEEcccCcCC----CCCCccCCCCCccCEEEccCCcCCCCCCc
Q 005898 113 TLARLTSLRVLSLVSLGIWGS----LPDKIHRLYSLEYLDLSSNFLF----GSVPPKISTMVKLQTLILDDNFFNNTIPN 184 (671)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~g~----~p~~~~~L~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 184 (671)
...++++|++|+|++|.+.+. ++..+.++++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|.
T Consensus 159 ~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~ 237 (592)
T 3ogk_B 159 IVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVG 237 (592)
T ss_dssp HHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHH
T ss_pred HHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHH
Confidence 344677888888888877655 4445566777777788777775 2334445567777777777776654 344
Q ss_pred ccCCCC---------------------------CcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccC-C-CCC
Q 005898 185 WFDSLP---------------------------SLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-D-LSS 235 (671)
Q Consensus 185 ~~~~l~---------------------------~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~-~~~ 235 (671)
.+.+++ +|+.|+++++. .+.+|..+..+++|++|+|++|.+++... . +..
T Consensus 238 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~ 316 (592)
T 3ogk_B 238 FFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQK 316 (592)
T ss_dssp HHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTT
T ss_pred HHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHh
Confidence 444444 44444444432 34567778889999999999999765443 2 578
Q ss_pred CCCCCEEECCCCCCCCCCCCC---CCCccEEEcC-----------CCCCCCC-chhhhcCCcccceeecccccccCCCcc
Q 005898 236 LGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLS-----------NNSFSGE-IPKQYGQLNQLQQLDMSFNALRGMPPP 300 (671)
Q Consensus 236 l~~L~~L~Ls~N~l~~~~p~~---~~~L~~l~l~-----------~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 300 (671)
+++|+.|+++++...+.++.+ .++|+.++++ .|.+++. ++.....+++|++|+++.|++++..+.
T Consensus 317 ~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~ 396 (592)
T 3ogk_B 317 CPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLE 396 (592)
T ss_dssp CTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHH
T ss_pred CcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHH
Confidence 999999999843222222222 3579999999 3677654 344456689999999999999987777
Q ss_pred ccCC-CCCcCeEecc----cCcCccc-----CCcccCCCCCccEEECcCC--cCcccCCCCCC-CCCCCceeccCCCcCC
Q 005898 301 AIFS-LPNISDLNLA----SNKFSGS-----LPKNLNCGGKLVFFDISNN--KLTGGLPSCLS-NESDKRVVKFRGNCLS 367 (671)
Q Consensus 301 ~~~~-l~~L~~L~L~----~N~l~g~-----~p~~~~~~~~L~~l~ls~N--~l~g~~p~~~~-~~~~l~~l~l~~N~l~ 367 (671)
.+.. +++|+.|+++ .|.+++. ++..+..+++|+.|+++++ .+++..+..+. .+++++.|++++|.++
T Consensus 397 ~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~ 476 (592)
T 3ogk_B 397 SIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGES 476 (592)
T ss_dssp HHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSS
T ss_pred HHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCC
Confidence 7765 8999999996 6778763 3344556788888888743 36654444333 2567888888888766
Q ss_pred C
Q 005898 368 S 368 (671)
Q Consensus 368 ~ 368 (671)
+
T Consensus 477 ~ 477 (592)
T 3ogk_B 477 D 477 (592)
T ss_dssp H
T ss_pred H
Confidence 3
No 374
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=7e-17 Score=151.97 Aligned_cols=135 Identities=22% Similarity=0.260 Sum_probs=121.2
Q ss_pred cCCCCCCEEeccccccc-ccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcC
Q 005898 115 ARLTSLRVLSLVSLGIW-GSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (671)
Q Consensus 115 ~~l~~L~~L~L~~n~l~-g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (671)
...++|+.|+|++|.+. +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34578999999999998 78999999999999999999999865 7899999999999999999988899888999999
Q ss_pred EEEcccccCCCCC-cccccCCCCCCEEEeccCccccccC----CCCCCCCCCEEECCCCCCCC
Q 005898 194 FLSMRNNKLAGPF-PSSIQRISTLSDLDLSKNAISGSLP----DLSSLGSLNVLNLSDNKLDS 251 (671)
Q Consensus 194 ~L~L~~N~l~g~~-p~~l~~l~~L~~L~Ls~N~l~g~~p----~~~~l~~L~~L~Ls~N~l~~ 251 (671)
+|++++|++++.. +..+..+++|+.|++++|.+++..+ .+..+++|++|++++|.+..
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999999998632 2789999999999999999998777 58899999999999998754
No 375
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=5.1e-17 Score=149.70 Aligned_cols=129 Identities=22% Similarity=0.247 Sum_probs=116.0
Q ss_pred CCCCCCEEeccccccc-ccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCE
Q 005898 116 RLTSLRVLSLVSLGIW-GSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTF 194 (671)
Q Consensus 116 ~l~~L~~L~L~~n~l~-g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (671)
..++|+.|++++|.+. +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 88999999999999999999999865 78999999999999999999888998889999999
Q ss_pred EEcccccCCCC-CcccccCCCCCCEEEeccCccccccC----CCCCCCCCCEEECCC
Q 005898 195 LSMRNNKLAGP-FPSSIQRISTLSDLDLSKNAISGSLP----DLSSLGSLNVLNLSD 246 (671)
Q Consensus 195 L~L~~N~l~g~-~p~~l~~l~~L~~L~Ls~N~l~g~~p----~~~~l~~L~~L~Ls~ 246 (671)
|++++|++++. .|..+..+++|+.|++++|.+++..+ .+..+++|+.|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999863 45889999999999999999998776 378899999998864
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=3.9e-17 Score=157.53 Aligned_cols=113 Identities=24% Similarity=0.286 Sum_probs=106.6
Q ss_pred CCCEEecccccccccCCc-cccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 119 SLRVLSLVSLGIWGSLPD-KIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 119 ~L~~L~L~~n~l~g~~p~-~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
+|++|+|++|.+.+..|. .|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 799999999999877765 4999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccccC
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP 231 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p 231 (671)
++|++++..|..+..+++|+.|+|++|.+++..+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 9999999999999999999999999999987654
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=2.7e-16 Score=147.95 Aligned_cols=136 Identities=21% Similarity=0.217 Sum_probs=101.9
Q ss_pred CCCCCCEEEcccCcCC-CCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCE
Q 005898 140 RLYSLEYLDLSSNFLF-GSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSD 218 (671)
Q Consensus 140 ~L~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~ 218 (671)
..++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|++++|++++.+|..+..+++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999997 78888888999999999999998865 77888999999999999998778888888888888
Q ss_pred EEeccCcccccc--CCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCch---hhhcCCcccceeeccccc
Q 005898 219 LDLSKNAISGSL--PDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIP---KQYGQLNQLQQLDMSFNA 293 (671)
Q Consensus 219 L~Ls~N~l~g~~--p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~ 293 (671)
|++++|.+++.. +.+..+++|+.|++++|.+++ ..+ ..+..+++|++|+++.|.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~---------------------~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTN---------------------LNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGT---------------------STTHHHHHHTTCSSCCEETTEETT
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcc---------------------hHHHHHHHHHhCccCcEecCCCCC
Confidence 888888887643 346666666666666665542 111 255566666666666666
Q ss_pred ccCCC
Q 005898 294 LRGMP 298 (671)
Q Consensus 294 l~~~~ 298 (671)
+...+
T Consensus 159 ~~~~~ 163 (168)
T 2ell_A 159 DQEAP 163 (168)
T ss_dssp SCBCC
T ss_pred hhhcc
Confidence 55443
No 378
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=8.3e-16 Score=141.53 Aligned_cols=132 Identities=20% Similarity=0.166 Sum_probs=113.1
Q ss_pred CCCCCCEEEcccCcCC-CCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCE
Q 005898 140 RLYSLEYLDLSSNFLF-GSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSD 218 (671)
Q Consensus 140 ~L~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~ 218 (671)
..++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|++++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 78999999999999999999999976 78899999999999999999889999999999999
Q ss_pred EEeccCcccccc--CCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeeccc
Q 005898 219 LDLSKNAISGSL--PDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSF 291 (671)
Q Consensus 219 L~Ls~N~l~g~~--p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~ 291 (671)
|++++|.+++.. +.+..+++|++|++++|++++..+ ..+..++.+++|+.||+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~------------------~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND------------------YRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT------------------HHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH------------------HHHHHHHHCCCcccccCCC
Confidence 999999999853 568899999999999887764211 0114678888899888863
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=3.9e-15 Score=141.31 Aligned_cols=130 Identities=26% Similarity=0.288 Sum_probs=101.0
Q ss_pred CCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEccc
Q 005898 120 LRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRN 199 (671)
Q Consensus 120 L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (671)
.+.+++++|++. .+|..+ .++|++|++++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467778787774 455433 36788888888888876666778888888888888888876666778888888888888
Q ss_pred ccCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCCCC
Q 005898 200 NKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSN 252 (671)
Q Consensus 200 N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~~~ 252 (671)
|++++..+..+..+++|+.|++++|.+++.++. +..+++|++|++++|.+++.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 888876666778888888888888888876665 46788888888888877653
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=4.4e-15 Score=143.18 Aligned_cols=126 Identities=25% Similarity=0.284 Sum_probs=98.9
Q ss_pred CEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccc
Q 005898 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN 200 (671)
Q Consensus 121 ~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 200 (671)
+++++++|++. .+|..+. ++|++|+|++|+++ .+|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46777777774 5665543 57888888888886 67778888888888888888888777777888888888888888
Q ss_pred cCCCCCcccccCCCCCCEEEeccCccccccCC-CCCCCCCCEEECCCCCCC
Q 005898 201 KLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLD 250 (671)
Q Consensus 201 ~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~ 250 (671)
++++..|..|..+++|+.|+|++|.+++..+. +..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 88877777788888888888888888866664 677888888888888765
No 381
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=1.3e-15 Score=160.64 Aligned_cols=147 Identities=12% Similarity=0.126 Sum_probs=98.5
Q ss_pred CCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCch--------------hhHHHHHHHHHHHhcCCCCCcccccceee
Q 005898 484 NFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK--------------YTVRNLKLRLDLLAKLRHPHLVCLLGHCI 549 (671)
Q Consensus 484 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 549 (671)
-|+....||+|+||.||+|+.++|+.||||+++.... ........++++.+...|+|+++++....
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3778899999999999999988999999998743210 01122233333333333444444432211
Q ss_pred cCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCceeecCC
Q 005898 550 DGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH 629 (671)
Q Consensus 550 ~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlk~~NiLl~~~ 629 (671)
... . .+.....+|||||+++++|...... .....++.|++.++.|+|+. +||||||||.|||++++
T Consensus 176 ~vp-~-p~~~~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 176 PVP-E-PIAQSRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREE 241 (397)
T ss_dssp SCC-C-EEEEETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEE
T ss_pred CCC-e-eeeccCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCC
Confidence 100 0 0001123799999999888665431 12346788999999999987 79999999999999887
Q ss_pred C----------cEEEcccCCccccc
Q 005898 630 R----------IAKLSDYGLSIVSE 644 (671)
Q Consensus 630 ~----------~~ki~DfGla~~~~ 644 (671)
+ .+.|.||+-+...+
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCcccccccccceEEEEeCCcccCC
Confidence 6 38999999876543
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=1.4e-14 Score=139.69 Aligned_cols=128 Identities=18% Similarity=0.285 Sum_probs=108.4
Q ss_pred CEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCc
Q 005898 240 NVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (671)
Q Consensus 240 ~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (671)
+.+++++|.++.....++.+++.|++++|+++ .+|..|..+++|+.|+|++|++++.++..|..+++|+.|+|++|+++
T Consensus 13 ~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~ 91 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91 (193)
T ss_dssp TEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccC
Confidence 45666666665443345566777777777776 67889999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCC
Q 005898 320 GSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (671)
Q Consensus 320 g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (671)
+..|..+..+++|+.|+|++|++++..+..+..+++++.+++++|.+.+
T Consensus 92 ~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 92 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp BCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred EeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9888899999999999999999997666678889999999999998875
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=2.5e-14 Score=135.71 Aligned_cols=130 Identities=16% Similarity=0.169 Sum_probs=99.3
Q ss_pred CEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCc
Q 005898 240 NVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (671)
Q Consensus 240 ~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (671)
+.+++++|+++......+.+++.+++++|++++..+..|+.+++|++|++++|++++.++..+..+++|+.|+|++|+++
T Consensus 10 ~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 89 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ 89 (177)
T ss_dssp TEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCcc
Confidence 44555555555443344455666666666666666667788888999999999998888877888899999999999998
Q ss_pred ccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCCcCCCC
Q 005898 320 GSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSN 369 (671)
Q Consensus 320 g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 369 (671)
+..+..+..+++|+.|++++|++++..+..+..+++++.+++++|.+.+.
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 90 SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 77777778888899999999998865555567788888999998887753
No 384
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.1e-15 Score=141.88 Aligned_cols=132 Identities=20% Similarity=0.252 Sum_probs=112.6
Q ss_pred cccCCCCCCEEecccccccccCCccccCCC-CCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCC
Q 005898 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLY-SLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPS 191 (671)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 191 (671)
.+.++.+|+.|+|++|.+.. +|. +..+. +|++|+|++|.+++. +.+..+++|++|+|++|.+++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 56788999999999999974 565 55554 999999999999865 68999999999999999999765566699999
Q ss_pred cCEEEcccccCCCCCcc--cccCCCCCCEEEeccCccccccCC----CCCCCCCCEEECCCCCC
Q 005898 192 LTFLSMRNNKLAGPFPS--SIQRISTLSDLDLSKNAISGSLPD----LSSLGSLNVLNLSDNKL 249 (671)
Q Consensus 192 L~~L~L~~N~l~g~~p~--~l~~l~~L~~L~Ls~N~l~g~~p~----~~~l~~L~~L~Ls~N~l 249 (671)
|++|++++|+++ .+|. .+..+++|+.|++++|.++...+. +..+++|+.||+++|..
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 999999999996 5776 889999999999999999855443 77899999999998865
No 385
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=2.3e-17 Score=159.91 Aligned_cols=133 Identities=25% Similarity=0.294 Sum_probs=91.6
Q ss_pred cccCCCCCCEEecccccccccCCc------cccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCccc
Q 005898 113 TLARLTSLRVLSLVSLGIWGSLPD------KIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWF 186 (671)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~g~~p~------~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 186 (671)
.+.....++.++++.+.+.|.+|. .+.++++|++|+|++|.+++ +| .+.++++|+.|+|++|.++ .+|..+
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchh
Confidence 356667778888888888887776 77778888888888887765 56 6777777777777777776 566666
Q ss_pred CCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccC--CCCCCCCCCEEECCCCCCC
Q 005898 187 DSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP--DLSSLGSLNVLNLSDNKLD 250 (671)
Q Consensus 187 ~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p--~~~~l~~L~~L~Ls~N~l~ 250 (671)
..+++|++|++++|++++ +| .+..+++|+.|++++|.+++..+ .+..+++|++|++++|.++
T Consensus 90 ~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 90 AVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred hcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 666777777777777764 44 46666777777777776664322 3455555555555555443
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=4.4e-17 Score=157.91 Aligned_cols=154 Identities=25% Similarity=0.319 Sum_probs=92.3
Q ss_pred ccCCCCCCEEEcccCcCCCCCCc------cCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCccccc
Q 005898 138 IHRLYSLEYLDLSSNFLFGSVPP------KISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQ 211 (671)
Q Consensus 138 ~~~L~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~ 211 (671)
+.....++.++++.|.++|.+|. .+..+++|++|+|++|.+++ +| .+.++++|++|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34445566666666666666555 56666666666666666665 45 5666666666666666666 4566666
Q ss_pred CCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCch--hhhcCCcccceeec
Q 005898 212 RISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIP--KQYGQLNQLQQLDM 289 (671)
Q Consensus 212 ~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p--~~~~~l~~L~~L~L 289 (671)
.+++|+.|++++|.+++ +|.+..+++|++|++++|++++ +| ..+..+++|++|++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N~i~~----------------------~~~~~~l~~l~~L~~L~l 147 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LSGIEKLVNLRVLYMSNNKITN----------------------WGEIDKLAALDKLEDLLL 147 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HHHHHHHHHSSEEEESEEECCC----------------------HHHHHHHTTTTTCSEEEE
T ss_pred cCCcCCEEECcCCcCCc-CCccccCCCCCEEECCCCcCCc----------------------hhHHHHHhcCCCCCEEEe
Confidence 66666666666666665 3455556666666666655431 12 34556666666666
Q ss_pred ccccccCCCccc----------cCCCCCcCeEecccCcCc
Q 005898 290 SFNALRGMPPPA----------IFSLPNISDLNLASNKFS 319 (671)
Q Consensus 290 s~N~l~~~~~~~----------~~~l~~L~~L~L~~N~l~ 319 (671)
++|.+++.+|.. +..+++|+.|| +|.++
T Consensus 148 ~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 148 AGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp CSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred cCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 666666654432 55566666665 44443
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.52 E-value=4.9e-15 Score=155.32 Aligned_cols=101 Identities=13% Similarity=0.110 Sum_probs=61.7
Q ss_pred CCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcC-eEecccCcCcccCCcccCCCCCccEEE
Q 005898 258 RGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNIS-DLNLASNKFSGSLPKNLNCGGKLVFFD 336 (671)
Q Consensus 258 ~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~g~~p~~~~~~~~L~~l~ 336 (671)
.+|+.+++++|+++...+..|..+++|+.|+|++| ++.+.+..|.++++|+ .+++.+ .++..-+..|..+.+|+.++
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 35556666666665444455666666666666666 6666666666666666 666666 55544455666666666666
Q ss_pred CcCCcCcccCCCCCCCCCCCceec
Q 005898 337 ISNNKLTGGLPSCLSNESDKRVVK 360 (671)
Q Consensus 337 ls~N~l~g~~p~~~~~~~~l~~l~ 360 (671)
+++|+++..-+..+.++++|+.+.
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEE
T ss_pred eCCCccCccchhhhcCCcchhhhc
Confidence 666666655555566666665543
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=1.5e-14 Score=137.12 Aligned_cols=109 Identities=21% Similarity=0.203 Sum_probs=71.4
Q ss_pred cccCCCCCCEEEcccCcCCCCCCccCCCCC-ccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCC
Q 005898 137 KIHRLYSLEYLDLSSNFLFGSVPPKISTMV-KLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRIST 215 (671)
Q Consensus 137 ~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~ 215 (671)
.+.++.+|++|+|++|+++. +|. +..+. +|+.|+|++|.+++. ..++.+++|++|++++|++++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46677888888888888863 444 44444 778888888877754 56777777777777777777543344466777
Q ss_pred CCEEEeccCccccccC--CCCCCCCCCEEECCCCCC
Q 005898 216 LSDLDLSKNAISGSLP--DLSSLGSLNVLNLSDNKL 249 (671)
Q Consensus 216 L~~L~Ls~N~l~g~~p--~~~~l~~L~~L~Ls~N~l 249 (671)
|+.|++++|.++...+ .+..+++|+.|++++|.+
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i 125 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPV 125 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGG
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCC
Confidence 7777777777654332 355555666666655554
No 389
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.50 E-value=4.8e-16 Score=176.23 Aligned_cols=107 Identities=8% Similarity=0.054 Sum_probs=48.6
Q ss_pred CccEEEcCCCCCCCCchhhhc-CCcccceeecc--c----ccccCCCc-----cccCCCCCcCeEecccCcCcccCCccc
Q 005898 259 GLVMAFLSNNSFSGEIPKQYG-QLNQLQQLDMS--F----NALRGMPP-----PAIFSLPNISDLNLASNKFSGSLPKNL 326 (671)
Q Consensus 259 ~L~~l~l~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~~~-----~~~~~l~~L~~L~L~~N~l~g~~p~~~ 326 (671)
+|+.+.++.|.+++..+..+. .+++|+.|+++ + |.++..+. ..+..+++|+.|+|++ .+++..+..+
T Consensus 373 ~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l 451 (594)
T 2p1m_B 373 KLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYI 451 (594)
T ss_dssp TCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHH
T ss_pred hHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHH
Confidence 344444444444443333332 34555555555 2 33332221 1133445555555544 3443333333
Q ss_pred CC-CCCccEEECcCCcCcccCCCCC-CCCCCCceeccCCCcC
Q 005898 327 NC-GGKLVFFDISNNKLTGGLPSCL-SNESDKRVVKFRGNCL 366 (671)
Q Consensus 327 ~~-~~~L~~l~ls~N~l~g~~p~~~-~~~~~l~~l~l~~N~l 366 (671)
.. +++|+.|++++|.+++..+..+ ..+++|+.|++++|.+
T Consensus 452 ~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 452 GTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 22 4556666666666544333222 3345566666666554
No 390
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.6e-13 Score=129.36 Aligned_cols=104 Identities=22% Similarity=0.257 Sum_probs=48.7
Q ss_pred CEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccc
Q 005898 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN 200 (671)
Q Consensus 121 ~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 200 (671)
+.|++++|.+.. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 445555555532 443332 44555555555555444444555555555555555554443344444444444444444
Q ss_pred cCCCCCcccccCCCCCCEEEeccCccc
Q 005898 201 KLAGPFPSSIQRISTLSDLDLSKNAIS 227 (671)
Q Consensus 201 ~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 227 (671)
+|++..|..|..+++|+.|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 444333333444444444444444443
No 391
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=1.2e-13 Score=144.62 Aligned_cols=218 Identities=12% Similarity=0.084 Sum_probs=139.6
Q ss_pred CCCCCEEeccccccc--cc-----------------C-CccccC--------CCCCCEEEcccCcCCCCCCccCCCCCcc
Q 005898 117 LTSLRVLSLVSLGIW--GS-----------------L-PDKIHR--------LYSLEYLDLSSNFLFGSVPPKISTMVKL 168 (671)
Q Consensus 117 l~~L~~L~L~~n~l~--g~-----------------~-p~~~~~--------L~~L~~L~Ls~N~l~~~~p~~~~~l~~L 168 (671)
+++|++|||++|.+. .. + +..|.+ +++|+.|+|+. .++..-+..|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 888999999999987 11 1 223455 67777777766 5655455566777777
Q ss_pred CEEEccCCcCCCCCCcccCCCCCcCEEEcccccC----CCCCcccccCCCCCC-EEEe----------------------
Q 005898 169 QTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKL----AGPFPSSIQRISTLS-DLDL---------------------- 221 (671)
Q Consensus 169 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~g~~p~~l~~l~~L~-~L~L---------------------- 221 (671)
+.|++++|.+....+..|..+.++..+.+..+.. ...-+..|..+..|+ .+.+
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 7777777766655555666666666555544211 111111222222332 1111
Q ss_pred ---ccCccccccCCC-CCCCCCCEEECCCCCCCCCCCCC---CCCccEEEcCCCCCCCCchhhhcCCcccc-eeeccccc
Q 005898 222 ---SKNAISGSLPDL-SSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNNSFSGEIPKQYGQLNQLQ-QLDMSFNA 293 (671)
Q Consensus 222 ---s~N~l~g~~p~~-~~l~~L~~L~Ls~N~l~~~~p~~---~~~L~~l~l~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~ 293 (671)
.++-.......+ ..+++|+.++|++|+++...+.. ..+|+.+++.+| ++..-+..|..+++|+ .+++.+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 111000000000 12567778888777766443333 346777777777 6655567899999999 999998 8
Q ss_pred ccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEEC
Q 005898 294 LRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDI 337 (671)
Q Consensus 294 l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~l 337 (671)
++.+.+..|.++++|+.+++++|+++..-+..|..+.+|+.++.
T Consensus 285 l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 285 VTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 88888899999999999999999999777778999999998864
No 392
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=3.2e-13 Score=127.80 Aligned_cols=104 Identities=22% Similarity=0.301 Sum_probs=55.7
Q ss_pred CEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccc
Q 005898 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN 200 (671)
Q Consensus 121 ~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 200 (671)
+.+++++|.+ +.+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3555555555 34554443 55666666666665555555555555555555555555443444455555555555555
Q ss_pred cCCCCCcccccCCCCCCEEEeccCccc
Q 005898 201 KLAGPFPSSIQRISTLSDLDLSKNAIS 227 (671)
Q Consensus 201 ~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 227 (671)
+|++..+..|..+++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555433333555555555555555544
No 393
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.44 E-value=8.2e-16 Score=174.30 Aligned_cols=246 Identities=16% Similarity=0.120 Sum_probs=130.0
Q ss_pred cCCCCCCEEecccccccccCCcccc-CCCCCCEEEcccC-cCCCC-CCccCCCCCccCEEEccCCcCCCCCCcccC----
Q 005898 115 ARLTSLRVLSLVSLGIWGSLPDKIH-RLYSLEYLDLSSN-FLFGS-VPPKISTMVKLQTLILDDNFFNNTIPNWFD---- 187 (671)
Q Consensus 115 ~~l~~L~~L~L~~n~l~g~~p~~~~-~L~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~---- 187 (671)
.++++|++|+|++|.+.+..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+.++.
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 3455666666666655554444443 4556666666655 33221 233333555666666666655543333322
Q ss_pred CCCCcCEEEccccc--CCC-CCcccccCCCCCCEEEeccC-ccccccCC-CCCCCCCCEEECCCCC--------------
Q 005898 188 SLPSLTFLSMRNNK--LAG-PFPSSIQRISTLSDLDLSKN-AISGSLPD-LSSLGSLNVLNLSDNK-------------- 248 (671)
Q Consensus 188 ~l~~L~~L~L~~N~--l~g-~~p~~l~~l~~L~~L~Ls~N-~l~g~~p~-~~~l~~L~~L~Ls~N~-------------- 248 (671)
.+++|++|++++|. ++. .++..+.++++|+.|++++| .+.+ +|. +..+++|+.|+++.+.
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~ 260 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVA 260 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHH
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHH
Confidence 44456666666554 110 01111233456666666555 2332 221 3344445555443321
Q ss_pred ------------C----CCCCCCC---CCCccEEEcCCCCCCCCc-hhhhcCCcccceeecccccccC-CCccccCCCCC
Q 005898 249 ------------L----DSNLPKL---PRGLVMAFLSNNSFSGEI-PKQYGQLNQLQQLDMSFNALRG-MPPPAIFSLPN 307 (671)
Q Consensus 249 ------------l----~~~~p~~---~~~L~~l~l~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~ 307 (671)
+ .+.+|.+ ..+|+.|++++|.+++.. +..+..+++|+.|++++| ++. .++.....+++
T Consensus 261 l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 261 LSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp HHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred HhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 0 1112222 357888888888876543 333567888888888887 332 22222335788
Q ss_pred cCeEecc---------cCcCcccCCcccC-CCCCccEEECcCCcCcccCCCCCC-CCCCCceeccC
Q 005898 308 ISDLNLA---------SNKFSGSLPKNLN-CGGKLVFFDISNNKLTGGLPSCLS-NESDKRVVKFR 362 (671)
Q Consensus 308 L~~L~L~---------~N~l~g~~p~~~~-~~~~L~~l~ls~N~l~g~~p~~~~-~~~~l~~l~l~ 362 (671)
|+.|+++ .|.+++.....+. .+++|+.|+++.|.+++..+..+. .+++++.++++
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 8888883 3455543222222 367788888888888765444443 35677888877
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=4.5e-13 Score=126.18 Aligned_cols=107 Identities=21% Similarity=0.264 Sum_probs=70.6
Q ss_pred CCEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcC
Q 005898 239 LNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKF 318 (671)
Q Consensus 239 L~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 318 (671)
.+.+++++|.++.....++..++.|+|++|++++..|..|..+++|++|+|++|+|++.++..|..+++|+.|+|++|++
T Consensus 11 ~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp TTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 34566666665543333445555566666666666666777777777777777777777776667777777777777777
Q ss_pred cccCCcccCCCCCccEEECcCCcCccc
Q 005898 319 SGSLPKNLNCGGKLVFFDISNNKLTGG 345 (671)
Q Consensus 319 ~g~~p~~~~~~~~L~~l~ls~N~l~g~ 345 (671)
++..|..+..+.+|+.|+|++|.+++.
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 765555666677777777777766643
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=1.3e-12 Score=123.58 Aligned_cols=104 Identities=22% Similarity=0.289 Sum_probs=58.5
Q ss_pred CEEECCCCCCCCCCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCc
Q 005898 240 NVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (671)
Q Consensus 240 ~~L~Ls~N~l~~~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (671)
+.+++++|+++...+.++..++.|+|++|++++..|..|+.+++|++|+|++|+|++.++..+..+++|+.|+|++|+++
T Consensus 15 ~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~ 94 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK 94 (174)
T ss_dssp SEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccc
Confidence 45555555554322223344445555555555555556666666666666666666666555556666666666666666
Q ss_pred ccCCcccCCCCCccEEECcCCcCc
Q 005898 320 GSLPKNLNCGGKLVFFDISNNKLT 343 (671)
Q Consensus 320 g~~p~~~~~~~~L~~l~ls~N~l~ 343 (671)
+..+..+..+++|+.|+|++|.+.
T Consensus 95 ~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 95 SIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCTTTTTTCTTCSEEECCSSCBC
T ss_pred eeCHHHhccccCCCEEEeCCCCcc
Confidence 444444555556666666666554
No 396
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=7.5e-12 Score=131.87 Aligned_cols=78 Identities=17% Similarity=0.134 Sum_probs=36.8
Q ss_pred ecccc-cccccCCccccCCCCCCEEEccc-CcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEccccc
Q 005898 124 SLVSL-GIWGSLPDKIHRLYSLEYLDLSS-NFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNK 201 (671)
Q Consensus 124 ~L~~n-~l~g~~p~~~~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 201 (671)
+++++ ++.+ +|. |..+++|++|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|++|+|++|+
T Consensus 14 ~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44444 3432 444 55555555555543 44444444444444444444444444444444444444444444444444
Q ss_pred CC
Q 005898 202 LA 203 (671)
Q Consensus 202 l~ 203 (671)
|+
T Consensus 92 l~ 93 (347)
T 2ifg_A 92 LE 93 (347)
T ss_dssp CS
T ss_pred cc
Confidence 44
No 397
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.26 E-value=1.6e-10 Score=124.12 Aligned_cols=238 Identities=12% Similarity=0.126 Sum_probs=138.8
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEc
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (671)
..++.+.+.+ ++...-+..|.+. +|+.++|..| ++..-...|.+ .+|+.+.+.. .+...-+..|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4555555543 2333334445553 5666666554 44334445555 3566666664 444444456666666666666
Q ss_pred ccccCCCCCcccccCCCCCCEEEeccCccccccC-CCCCCCCCCEEECCCCCCCCCCCCC--CCCccEEEcCCCCCCCCc
Q 005898 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGEI 274 (671)
Q Consensus 198 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~L~~l~l~~N~l~~~~ 274 (671)
++|+++ .+|......++|+.+.|..| ++.... .|.++++|+.+++.+| ++..-... ..+|+.+.+. +.++..-
T Consensus 188 ~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~lp-~~i~~I~ 263 (401)
T 4fdw_A 188 SKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKLP-NGVTNIA 263 (401)
T ss_dssp TTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEEE-TTCCEEC
T ss_pred CCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEeC-CCccEEC
Confidence 666666 33333223566666666633 332222 2566666666666654 21111111 1356666663 3344444
Q ss_pred hhhhcCCcccceeeccccccc-----CCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCC
Q 005898 275 PKQYGQLNQLQQLDMSFNALR-----GMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSC 349 (671)
Q Consensus 275 p~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~ 349 (671)
+..|..+++|+.+++.+|.+. .+.+..|.++++|+.++|. |.++..-...|..+.+|+.+++.+| ++-.-+..
T Consensus 264 ~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~a 341 (401)
T 4fdw_A 264 SRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSA 341 (401)
T ss_dssp TTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTS
T ss_pred hhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHh
Confidence 567778888888888777765 4566677788888888887 4466444556777788888888554 55444556
Q ss_pred CCCCCCCceeccCCCcCC
Q 005898 350 LSNESDKRVVKFRGNCLS 367 (671)
Q Consensus 350 ~~~~~~l~~l~l~~N~l~ 367 (671)
+.++ +|+.+.+.+|...
T Consensus 342 F~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 342 FNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp SSSS-CCCEEEECCSSCC
T ss_pred CCCC-CCCEEEEcCCCCc
Confidence 7777 7888888777544
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=1.6e-11 Score=129.41 Aligned_cols=105 Identities=23% Similarity=0.158 Sum_probs=91.9
Q ss_pred CEEEcccC-cCCCCCCccCCCCCccCEEEccC-CcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEec
Q 005898 145 EYLDLSSN-FLFGSVPPKISTMVKLQTLILDD-NFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLS 222 (671)
Q Consensus 145 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls 222 (671)
..++++++ +|+ .+|. |..+++|++|+|++ |.|++..|..|++|++|++|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45789988 887 4888 99999999999996 99998888899999999999999999999889999999999999999
Q ss_pred cCccccccCCCCCCCCCCEEECCCCCCCC
Q 005898 223 KNAISGSLPDLSSLGSLNVLNLSDNKLDS 251 (671)
Q Consensus 223 ~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~ 251 (671)
+|+|++.++.......|+.|+|++|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 99999877764433349999999998764
No 399
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.21 E-value=4.9e-10 Score=120.28 Aligned_cols=229 Identities=9% Similarity=0.041 Sum_probs=172.8
Q ss_pred hcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCC
Q 005898 112 TTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPS 191 (671)
Q Consensus 112 ~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 191 (671)
.+|.++ +|+.+.|..+ +...-+..|.+. +|+.++|.. .+...-+..|.++.+|+.++|+.|.++..-...|. ..+
T Consensus 130 ~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~ 204 (401)
T 4fdw_A 130 DAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAG 204 (401)
T ss_dssp TTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCC
T ss_pred hhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecc
Confidence 356675 7999999776 655555678774 799999985 67666678899999999999999999855455565 689
Q ss_pred cCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccC-CCCCCCCCCEEECCCCCCCCCCCC---CCCCccEEEcCC
Q 005898 192 LTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPK---LPRGLVMAFLSN 267 (671)
Q Consensus 192 L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~L~~l~l~~ 267 (671)
|+.+.+.++ ++..-...|..+++|+.+++..| ++..-. .|.+ ++|+.+.+.+ .++..-+. -..+|+.+.+.+
T Consensus 205 L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~ 280 (401)
T 4fdw_A 205 IEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPN-GVTNIASRAFYYCPELAEVTTYG 280 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEET-TCCEECTTTTTTCTTCCEEEEES
T ss_pred cCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCC-CccEEChhHhhCCCCCCEEEeCC
Confidence 999999855 66455567899999999999876 443322 2555 7899999954 34322222 245789999988
Q ss_pred CCCC-----CCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcC
Q 005898 268 NSFS-----GEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKL 342 (671)
Q Consensus 268 N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l 342 (671)
|.+. ..-+..|..+++|+.+++. |.++.+....|.++++|+.++|..| ++..-+..|..+ +|+.+++++|.+
T Consensus 281 ~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 281 STFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp SCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSC
T ss_pred ccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCC
Confidence 8765 2345688999999999999 5688888889999999999999655 665556688888 999999999987
Q ss_pred cccCCCCCCC
Q 005898 343 TGGLPSCLSN 352 (671)
Q Consensus 343 ~g~~p~~~~~ 352 (671)
.-..+..+..
T Consensus 358 ~~l~~~~F~~ 367 (401)
T 4fdw_A 358 PQVFEKVWYG 367 (401)
T ss_dssp CBCCCSSCCC
T ss_pred cccccccccC
Confidence 6433333333
No 400
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.21 E-value=1.5e-11 Score=124.08 Aligned_cols=158 Identities=14% Similarity=0.089 Sum_probs=118.2
Q ss_pred HHHhcCCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCC-CCCcccccceeecCCCCCCc
Q 005898 479 KEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDY 557 (671)
Q Consensus 479 ~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 557 (671)
......|+.....+.|+.+.||+.... +..+++|............+.+|+++++.++ |..+.++++++.+.+
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~----- 83 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG----- 83 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT-----
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC-----
Confidence 344556777778888899999998754 6889999986432222346888999998884 677888888876543
Q ss_pred ccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC---------------------------
Q 005898 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV--------------------------- 610 (671)
Q Consensus 558 ~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~--------------------------- 610 (671)
..|+||||+++.++.+.... ..+...++.+++++++.||+..
T Consensus 84 ---~~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (263)
T 3tm0_A 84 ---WSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD 152 (263)
T ss_dssp ---EEEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred ---ceEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccc
Confidence 67999999999998765321 1123477888999999999710
Q ss_pred -----------------------------CCCccccCCCCCceeecCCCcEEEcccCCccccccccccceee
Q 005898 611 -----------------------------IPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVRL 653 (671)
Q Consensus 611 -----------------------------~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~l 653 (671)
.+.++|+|+++.||+++++..+.|.||+.+...+-.|.++..+
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~gd~~~Dla~~~ 224 (263)
T 3tm0_A 153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCV 224 (263)
T ss_dssp CSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEEEHHHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccCCHHHHHHHHH
Confidence 1358999999999999876666799999998887666666554
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.19 E-value=1.6e-13 Score=146.01 Aligned_cols=62 Identities=19% Similarity=0.142 Sum_probs=29.1
Q ss_pred CCCCEEecccccccccCCccccC-----CCCCCEEEcccCcCCCCCCccC-CCCCccCEEEccCCcCC
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHR-----LYSLEYLDLSSNFLFGSVPPKI-STMVKLQTLILDDNFFN 179 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~-----L~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~ 179 (671)
+.|+.|+|++|.++..-...+.. .++|++|||++|.++..-...+ ..+.+|++|+|++|.++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~ 139 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG 139 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC
Confidence 45666666666664432222221 2456666666665543222111 22344555555555544
No 402
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=4e-11 Score=120.46 Aligned_cols=141 Identities=15% Similarity=0.117 Sum_probs=103.5
Q ss_pred ccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCc--ccccceeecCCCCCCcccceEEEEEecC
Q 005898 492 GEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHL--VCLLGHCIDGGGRDDYAVNKVFLVYEFM 569 (671)
Q Consensus 492 G~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~~~~~~~~~~~~~Lv~Ey~ 569 (671)
+.|..+.||+....+|..++||..... ....+.+|+++++.+++.++ .+++++..+++ ..++||||+
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--------~~~~v~e~i 97 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG--------RDWLLLGEV 97 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--------CEEEEEECC
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--------CCEEEEEec
Confidence 456669999998777888999997643 22457889998888865554 45777665432 479999999
Q ss_pred CCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC---------------------------------------
Q 005898 570 SNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV--------------------------------------- 610 (671)
Q Consensus 570 ~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~--------------------------------------- 610 (671)
++.++. ... .+ ...++.++++.+..||+..
T Consensus 98 ~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 98 PGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp SSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred CCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 998884 211 11 2356777788888888642
Q ss_pred ----------------CCCccccCCCCCceeecCCCcEEEcccCCccccccccccceeee
Q 005898 611 ----------------IPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVRLL 654 (671)
Q Consensus 611 ----------------~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~l~ 654 (671)
.+.++|+|+++.||+++++..+.|.|||.+...+..|.++..++
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~~~~Dla~~~~ 226 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATR 226 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccCChHHHHHHHHh
Confidence 11389999999999998876677999999998887776666543
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.10 E-value=1.3e-12 Score=139.10 Aligned_cols=87 Identities=16% Similarity=0.111 Sum_probs=45.9
Q ss_pred CCCCCEEEcccCcCCCCCCccC----C-CCCccCEEEccCCcCCCCCCccc-CCCCCcCEEEcccccCCCCCcccc----
Q 005898 141 LYSLEYLDLSSNFLFGSVPPKI----S-TMVKLQTLILDDNFFNNTIPNWF-DSLPSLTFLSMRNNKLAGPFPSSI---- 210 (671)
Q Consensus 141 L~~L~~L~Ls~N~l~~~~p~~~----~-~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~g~~p~~l---- 210 (671)
+++|+.|+|++|.++......+ . ...+|++|+|++|.++..-...+ ..+++|+.|+|++|+++..-...+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3568888888888764322222 2 22567777777776653222222 234556666666666653222222
Q ss_pred -cCCCCCCEEEeccCccc
Q 005898 211 -QRISTLSDLDLSKNAIS 227 (671)
Q Consensus 211 -~~l~~L~~L~Ls~N~l~ 227 (671)
...++|+.|+|++|.++
T Consensus 151 ~~~~~~L~~L~Ls~n~l~ 168 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLT 168 (372)
T ss_dssp HSTTCCCCEEECCSSCCH
T ss_pred HhcCCccceeeCCCCCCC
Confidence 12345555555555553
No 404
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.92 E-value=1.5e-09 Score=114.89 Aligned_cols=154 Identities=15% Similarity=0.248 Sum_probs=110.2
Q ss_pred CceeccCCceEEEEEEEcCCcEEEEEEcc--CCc-hhhHHHHHHHHHHHhcCC--CCCcccccceeecCCCCCCcccceE
Q 005898 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLP--SSK-KYTVRNLKLRLDLLAKLR--HPHLVCLLGHCIDGGGRDDYAVNKV 562 (671)
Q Consensus 488 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~--~~~-~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~~~~~~ 562 (671)
.+.++.|.++.||+.+.++ ..+++|+.. ... ......+.+|.++++.++ +..+.++++++.+.+. ....
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~-----~g~~ 116 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV-----IGRA 116 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT-----TSSC
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc-----cCCe
Confidence 5678999999999988764 578888875 332 123456888999998887 4557788888765421 1246
Q ss_pred EEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC--------------------------------
Q 005898 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV-------------------------------- 610 (671)
Q Consensus 563 ~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-------------------------------- 610 (671)
++||||+++..+.+... ..++..++..++.++++.|+.||...
T Consensus 117 ~~vme~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp EEEEECCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 89999999987744211 12678889999999999999999721
Q ss_pred -----------------------CCCccccCCCCCceeecCCCc--EEEcccCCcccccccccccee
Q 005898 611 -----------------------IPGFFNNRVKTNNILLNEHRI--AKLSDYGLSIVSEDINSVGVR 652 (671)
Q Consensus 611 -----------------------~~~iiHrDlk~~NiLl~~~~~--~ki~DfGla~~~~d~~s~g~~ 652 (671)
.+.++|+|+++.||++++++. +.|.||+.+...+-.+.++..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~p~~DLa~~ 258 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMGDFGYH 258 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEECHHHHHHHH
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCCHHHHHHHH
Confidence 246899999999999997753 689999999887644444443
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=7.6e-10 Score=116.80 Aligned_cols=14 Identities=14% Similarity=0.048 Sum_probs=7.2
Q ss_pred ccCCCCCCEEEccc
Q 005898 138 IHRLYSLEYLDLSS 151 (671)
Q Consensus 138 ~~~L~~L~~L~Ls~ 151 (671)
+.++++|+.|.+..
T Consensus 135 ~~~l~~L~~L~l~~ 148 (362)
T 2ra8_A 135 KEKFAHFEGLFWGD 148 (362)
T ss_dssp HHHHTTCSEEEECC
T ss_pred hhhcchhhheeecC
Confidence 33455555555543
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.77 E-value=9.2e-10 Score=116.18 Aligned_cols=86 Identities=14% Similarity=0.122 Sum_probs=50.2
Q ss_pred chhcccCCCCCCEEecccccc---------cccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCC
Q 005898 110 FVTTLARLTSLRVLSLVSLGI---------WGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNN 180 (671)
Q Consensus 110 ~~~~l~~l~~L~~L~L~~n~l---------~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 180 (671)
++.++.++++|+.|.+..+.. .+.++..+..+++|+.|+|++|.-. .+|. +. +++|++|+|..+.++.
T Consensus 131 L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~ 207 (362)
T 2ra8_A 131 IVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPD 207 (362)
T ss_dssp HHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCH
T ss_pred HHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCCh
Confidence 344567788999999866532 1234455667778888888776311 2333 32 6677777776665543
Q ss_pred CCCcccC--CCCCcCEEEcc
Q 005898 181 TIPNWFD--SLPSLTFLSMR 198 (671)
Q Consensus 181 ~~p~~~~--~l~~L~~L~L~ 198 (671)
.....+. .+++|+.|+|+
T Consensus 208 ~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 208 SVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHHHHHSBCTTCCEEEEE
T ss_pred HHHHHHHHccCCCCcEEEEe
Confidence 2222222 56666666664
No 407
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.64 E-value=3e-07 Score=98.35 Aligned_cols=220 Identities=13% Similarity=0.066 Sum_probs=127.7
Q ss_pred CccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCC
Q 005898 135 PDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRIS 214 (671)
Q Consensus 135 p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~ 214 (671)
...|.++++|+.+++..+. ...-...|.++.+|+.+.+..| ++..-...|.++..|+.+.+..+... +.......+
T Consensus 155 ~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~ 230 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKT 230 (394)
T ss_dssp TTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTC
T ss_pred hhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccC
Confidence 3467888888888887553 3344566778888888888766 44344456777888888777665432 233344456
Q ss_pred CCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCC--CCCCCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccc
Q 005898 215 TLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDS--NLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFN 292 (671)
Q Consensus 215 ~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 292 (671)
+|+.+.+..+.-.-.-..+..+..|+.+.+..+...- ..-.-...+..+....+.+ ....|..+.+|+.+.+..+
T Consensus 231 ~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~ 307 (394)
T 4fs7_A 231 GVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS 307 (394)
T ss_dssp CCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT
T ss_pred CCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---ccccccccccccccccccc
Confidence 6777766543211111125566677777766553321 0111122344444433321 1234566677777777544
Q ss_pred cccCCCccccCCCCCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCC
Q 005898 293 ALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGN 364 (671)
Q Consensus 293 ~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N 364 (671)
++.+....|.++++|+.++|..+ ++..-...|..+.+|+.+++..| ++-.-...+.++.+|+.+.+..+
T Consensus 308 -i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 308 -VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp -CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred -cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 55555666777777777777543 44333456667777777777665 54333456666777777766543
No 408
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.63 E-value=3.9e-07 Score=97.46 Aligned_cols=241 Identities=10% Similarity=0.082 Sum_probs=126.8
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCc---------------
Q 005898 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNF--------------- 177 (671)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~--------------- 177 (671)
+|.++++|+.+.|..+ +...-..+|.++++|+.++|..+ ++..-...|.++.+|+.+.+..+-
T Consensus 66 AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~ 143 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKE 143 (394)
T ss_dssp TTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSE
T ss_pred HhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccc
Confidence 4555555555555432 33333344555555555555433 332223344555555544443220
Q ss_pred ------CCCCCCcccCCCCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccC--CCCCCCCCCEEECCCCCC
Q 005898 178 ------FNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP--DLSSLGSLNVLNLSDNKL 249 (671)
Q Consensus 178 ------l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p--~~~~l~~L~~L~Ls~N~l 249 (671)
....-...|.++++|+.+.+.++..+ .-...|..+++|+.+++..| ++ .++ .+.++..|+.+.+.++..
T Consensus 144 ~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~~~~L~~i~~~~~~~ 220 (394)
T 4fs7_A 144 ITIPEGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LK-IIRDYCFAECILLENMEFPNSLY 220 (394)
T ss_dssp EECCTTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CC-EECTTTTTTCTTCCBCCCCTTCC
T ss_pred cccCccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ce-EeCchhhccccccceeecCCCce
Confidence 01111234556666666666544321 22334556666666666554 22 111 244445555544443321
Q ss_pred C-CC------------CC-----------CCCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCC
Q 005898 250 D-SN------------LP-----------KLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSL 305 (671)
Q Consensus 250 ~-~~------------~p-----------~~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 305 (671)
. +. +| .-...+..+.+..+..+ .....|..+..++.+....+.+ +...+..+
T Consensus 221 ~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~ 296 (394)
T 4fs7_A 221 YLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGC 296 (394)
T ss_dssp EECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTC
T ss_pred EeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---cccccccc
Confidence 1 00 00 01123444444443221 2233455566666666555442 33467789
Q ss_pred CCcCeEecccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCCC
Q 005898 306 PNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGN 364 (671)
Q Consensus 306 ~~L~~L~L~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~N 364 (671)
.+|+.+.+..+ ++..-...|..+.+|+.+++.++ ++-.-...+.++.+|+.+.+..|
T Consensus 297 ~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 297 SSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 99999999765 55444567888999999999755 65444567888899999988765
No 409
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.50 E-value=6.4e-07 Score=92.88 Aligned_cols=147 Identities=16% Similarity=0.189 Sum_probs=103.3
Q ss_pred CCCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCC--CC--cccccceeecCCCCCCccc
Q 005898 484 NFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRH--PH--LVCLLGHCIDGGGRDDYAV 559 (671)
Q Consensus 484 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H--~n--iv~l~g~~~~~~~~~~~~~ 559 (671)
.....+.++.|....||+. |..+++|+.... .....+.+|.+++..+++ .. +.+++++ +
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---~-------- 100 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ---S-------- 100 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---C--------
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---C--------
Confidence 4556678999999999997 667888876432 223568899988888866 12 2333333 1
Q ss_pred ceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCC----------------------------
Q 005898 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVI---------------------------- 611 (671)
Q Consensus 560 ~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~---------------------------- 611 (671)
..++||||+++.++...... .++..++..++.++++.++.||+...
T Consensus 101 -~~~lvme~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (320)
T 3r70_A 101 -DRFNIMKYIKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISI 174 (320)
T ss_dssp -SSCEEEECCCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHH
T ss_pred -CcEEEEeecCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHH
Confidence 24899999999888633221 14556666677777777777774221
Q ss_pred --------------------------------CCccccCCCCCceeecCCCcEEEcccCCccccccccccceee
Q 005898 612 --------------------------------PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVRL 653 (671)
Q Consensus 612 --------------------------------~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~l 653 (671)
+.++|+|+++.||+++++..+.|.||+.+...+-.+.++..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl~~~~ 248 (320)
T 3r70_A 175 LEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLL 248 (320)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGGHHHH
T ss_pred HhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHHHHHH
Confidence 245999999999999986667999999998877666666554
No 410
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.50 E-value=3.3e-07 Score=94.32 Aligned_cols=151 Identities=16% Similarity=0.172 Sum_probs=102.1
Q ss_pred CceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCC-CCCc--ccccceeecCCCCCCcccceEEE
Q 005898 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHL--VCLLGHCIDGGGRDDYAVNKVFL 564 (671)
Q Consensus 488 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~ni--v~l~g~~~~~~~~~~~~~~~~~L 564 (671)
.+.++.|....||+.. ..+++|+-... .....+.+|.++|+.+. +..+ .+.+......+ .....|+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~-----~~~~~~~ 93 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE-----TYQMSFA 93 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS-----SCSCSCE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC-----CCCcceE
Confidence 4568999999999853 45888885432 34567899999998874 4333 23333322211 1113489
Q ss_pred EEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 005898 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTG----------------------------------- 609 (671)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~----------------------------------- 609 (671)
||||+++.++...... .++..++..++.++++.++.||..
T Consensus 94 vm~~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
T 3sg8_A 94 GFTKIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGP 168 (304)
T ss_dssp EEECCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHH
T ss_pred EEcccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcc
Confidence 9999999887643321 156666777777777777777741
Q ss_pred --------------------CCCCccccCCCCCceeecC--CCcEEEcccCCccccccccccceeee
Q 005898 610 --------------------VIPGFFNNRVKTNNILLNE--HRIAKLSDYGLSIVSEDINSVGVRLL 654 (671)
Q Consensus 610 --------------------~~~~iiHrDlk~~NiLl~~--~~~~ki~DfGla~~~~d~~s~g~~l~ 654 (671)
..+.++|+|+++.||++++ ...+.|.||+.+...+-.+.++..+.
T Consensus 169 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~ 235 (304)
T 3sg8_A 169 QMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLME 235 (304)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCC
T ss_pred cHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHh
Confidence 1245899999999999998 45678999999988775555555443
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.49 E-value=1e-08 Score=102.81 Aligned_cols=67 Identities=24% Similarity=0.310 Sum_probs=30.8
Q ss_pred cCCCCCCEEEcccCcCCC--CCCccCCCCCccCEEEccCCcCCCCCCcccCCCC--CcCEEEcccccCCCCCc
Q 005898 139 HRLYSLEYLDLSSNFLFG--SVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLP--SLTFLSMRNNKLAGPFP 207 (671)
Q Consensus 139 ~~L~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~g~~p 207 (671)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|.|++. ..+..+. +|++|+|++|.+.+.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 345555555555555554 2333444455555555555555432 1122222 44444444444444333
No 412
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.46 E-value=8.3e-07 Score=90.55 Aligned_cols=151 Identities=16% Similarity=0.121 Sum_probs=98.6
Q ss_pred cCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCC---CcccccceeecCCCCCCcccceEE
Q 005898 487 MSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHP---HLVCLLGHCIDGGGRDDYAVNKVF 563 (671)
Q Consensus 487 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~~~~~~~ 563 (671)
..+.||.|.++.||+.+..+|+.++||+...........|.+|++.|+.++|. .+.+++++. ..+
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------------~~~ 86 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------------DRT 86 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------------TTE
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec------------CcE
Confidence 45779999999999999888999999997543322345789999999999876 466666543 138
Q ss_pred EEEecCCCCChhh-----------hhhcCCCC------------------CCCCHHHH-----HHH----H---------
Q 005898 564 LVYEFMSNGNFRT-----------HISENTPG------------------KVLNWSER-----LAV----L--------- 596 (671)
Q Consensus 564 Lv~Ey~~~GsL~~-----------~l~~~~~~------------------~~l~~~~~-----~~i----~--------- 596 (671)
+||||++++.+.. .||..... ..-+|..- +.- +
T Consensus 87 lvme~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~ 166 (288)
T 3d1u_A 87 LAMEWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPG 166 (288)
T ss_dssp EEEECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHH
T ss_pred EEEEecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999987531 13322110 01245432 111 0
Q ss_pred --HHHHHHHHHhc----CCCCCCccccCCCCCceeecCCCcEEEcccCCccccccccccce
Q 005898 597 --IGVAKAVQFLH----TGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGV 651 (671)
Q Consensus 597 --~~ia~gl~yLH----~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~ 651 (671)
..+.+.++.+. ....|.++|+|+.+.||++++ +.+.|.|| .+...+-.+.++.
T Consensus 167 ~~~~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~~g~~~~Dl~~ 225 (288)
T 3d1u_A 167 DVRLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAHGGHREADLAM 225 (288)
T ss_dssp HHHHHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcCCCCHHHHHHH
Confidence 11112233332 234567999999999999998 45889999 7777663333443
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.43 E-value=2.2e-08 Score=95.29 Aligned_cols=118 Identities=12% Similarity=0.138 Sum_probs=77.0
Q ss_pred chhcccCCCCCCEEecccc-ccccc----CCccccCCCCCCEEEcccCcCCCC----CCccCCCCCccCEEEccCCcCCC
Q 005898 110 FVTTLARLTSLRVLSLVSL-GIWGS----LPDKIHRLYSLEYLDLSSNFLFGS----VPPKISTMVKLQTLILDDNFFNN 180 (671)
Q Consensus 110 ~~~~l~~l~~L~~L~L~~n-~l~g~----~p~~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 180 (671)
+...+...+.|++|+|++| .+... +...+...++|++|||++|.+... +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4456777888999999988 77532 445566778888888888887532 23344555677778888777764
Q ss_pred C----CCcccCCCCCcCEEEc--ccccCCCC----CcccccCCCCCCEEEeccCccc
Q 005898 181 T----IPNWFDSLPSLTFLSM--RNNKLAGP----FPSSIQRISTLSDLDLSKNAIS 227 (671)
Q Consensus 181 ~----~p~~~~~l~~L~~L~L--~~N~l~g~----~p~~l~~l~~L~~L~Ls~N~l~ 227 (671)
. +...+...++|++|+| ++|.+... +...+...++|+.|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2 3445556667777777 66766532 2233444566777777666653
No 414
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.37 E-value=1.7e-05 Score=84.65 Aligned_cols=131 Identities=9% Similarity=0.074 Sum_probs=73.1
Q ss_pred hcccCCCCCCEEeccccc---ccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCC
Q 005898 112 TTLARLTSLRVLSLVSLG---IWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDS 188 (671)
Q Consensus 112 ~~l~~l~~L~~L~L~~n~---l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 188 (671)
.+|.++++|+.+.+..|. +...-...|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|..
T Consensus 81 ~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~ 158 (394)
T 4gt6_A 81 NAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSY 158 (394)
T ss_dssp TTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred HHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceec
Confidence 357777778877776653 43333445777777777776544 44344456777777777777643 23233445667
Q ss_pred CCCcCEEEcccccCCCCCcccccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCC
Q 005898 189 LPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSD 246 (671)
Q Consensus 189 l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~ 246 (671)
+.+|+.+.+..+ ++ .+.........|+.+.+..+...-....+..+.+|.......
T Consensus 159 c~~L~~i~~~~~-~~-~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~ 214 (394)
T 4gt6_A 159 CYSLHTVTLPDS-VT-AIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITSDS 214 (394)
T ss_dssp CTTCCEEECCTT-CC-EECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEECC
T ss_pred ccccccccccce-ee-EeccccccccceeEEEECCcccccccchhhhccccceecccc
Confidence 777777777654 22 222222233566666665443321222345555555555443
No 415
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.35 E-value=2.3e-06 Score=88.16 Aligned_cols=147 Identities=14% Similarity=0.094 Sum_probs=94.5
Q ss_pred CceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCC---CcccccceeecCCCCCCcccceEEE
Q 005898 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHP---HLVCLLGHCIDGGGRDDYAVNKVFL 564 (671)
Q Consensus 488 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~~~~~~~L 564 (671)
.+.++.|....||+. |..++||+-. .......+.+|.++|..+++. .+.+.+.++.... ...++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~-------g~~~~ 90 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD-------GNPFV 90 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT-------SCEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC-------CceEE
Confidence 456788999999987 5678888742 223456789999999998753 2445555554222 24689
Q ss_pred EEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 005898 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHT------------------------------------ 608 (671)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~------------------------------------ 608 (671)
||||+++..+...... .++..++..++.++++.|+.||+
T Consensus 91 v~e~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~ 165 (306)
T 3tdw_A 91 GYRKVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLD 165 (306)
T ss_dssp EEECCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSC
T ss_pred EEeccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccc
Confidence 9999998777542110 02222333333333333333332
Q ss_pred ---------------------CCCCCccccCCCCCceeecC---CCc-EEEcccCCcccccccccccee
Q 005898 609 ---------------------GVIPGFFNNRVKTNNILLNE---HRI-AKLSDYGLSIVSEDINSVGVR 652 (671)
Q Consensus 609 ---------------------~~~~~iiHrDlk~~NiLl~~---~~~-~ki~DfGla~~~~d~~s~g~~ 652 (671)
...+.++|+|+++.||++++ ++. ..|.||+.+...+-.+.++.+
T Consensus 166 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~~Dla~~ 234 (306)
T 3tdw_A 166 ESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYL 234 (306)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGGGGGHHH
T ss_pred hhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHHHHHHHH
Confidence 12345799999999999987 455 489999999888766666654
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.34 E-value=1.6e-07 Score=94.09 Aligned_cols=81 Identities=23% Similarity=0.328 Sum_probs=67.5
Q ss_pred cCCCCCCEEecccccccc--cCCccccCCCCCCEEEcccCcCCCCCCccCCCCC--ccCEEEccCCcCCCCCCc------
Q 005898 115 ARLTSLRVLSLVSLGIWG--SLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMV--KLQTLILDDNFFNNTIPN------ 184 (671)
Q Consensus 115 ~~l~~L~~L~L~~n~l~g--~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~------ 184 (671)
.++++|+.|+|++|.|.+ .+|+.+..+++|+.|||++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999998 6778889999999999999999865 3344444 999999999999987773
Q ss_pred -ccCCCCCcCEEEc
Q 005898 185 -WFDSLPSLTFLSM 197 (671)
Q Consensus 185 -~~~~l~~L~~L~L 197 (671)
.+..+++|+.||=
T Consensus 245 ~il~~~P~L~~LDg 258 (267)
T 3rw6_A 245 AIRERFPKLLRLDG 258 (267)
T ss_dssp HHHHHCTTCCEESS
T ss_pred HHHHHCcccCeECC
Confidence 3567788887763
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.22 E-value=1.2e-07 Score=90.12 Aligned_cols=118 Identities=13% Similarity=0.142 Sum_probs=84.9
Q ss_pred cCCccccCCCCCCEEEcccC-cCCCC----CCccCCCCCccCEEEccCCcCCCC----CCcccCCCCCcCEEEcccccCC
Q 005898 133 SLPDKIHRLYSLEYLDLSSN-FLFGS----VPPKISTMVKLQTLILDDNFFNNT----IPNWFDSLPSLTFLSMRNNKLA 203 (671)
Q Consensus 133 ~~p~~~~~L~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 203 (671)
.+...+...++|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34456778899999999999 88532 345567778899999999988642 3344556678999999999887
Q ss_pred CC----CcccccCCCCCCEEEe--ccCccccccC-----CCCCCCCCCEEECCCCCCC
Q 005898 204 GP----FPSSIQRISTLSDLDL--SKNAISGSLP-----DLSSLGSLNVLNLSDNKLD 250 (671)
Q Consensus 204 g~----~p~~l~~l~~L~~L~L--s~N~l~g~~p-----~~~~l~~L~~L~Ls~N~l~ 250 (671)
.. +...+...++|+.|+| ++|.++..-. .+...++|+.|+|++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 42 4456677788999999 7788864311 2445577888888887653
No 418
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.17 E-value=7.4e-05 Score=79.59 Aligned_cols=106 Identities=12% Similarity=0.097 Sum_probs=59.9
Q ss_pred hcccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCC
Q 005898 112 TTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPS 191 (671)
Q Consensus 112 ~~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 191 (671)
.+|.++.+|+.+.+..+ +...-...|.++.+|+.+.+..+ +...-...|..+.+|+.+.+..+ ++..-...|. ..+
T Consensus 108 ~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~ 183 (394)
T 4gt6_A 108 QAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTA 183 (394)
T ss_dssp TTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCC
T ss_pred hhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEecccccc-ccc
Confidence 35677777877776543 33334456777888888888644 33344556777788888877654 3322223333 345
Q ss_pred cCEEEcccccCCCCCcccccCCCCCCEEEec
Q 005898 192 LTFLSMRNNKLAGPFPSSIQRISTLSDLDLS 222 (671)
Q Consensus 192 L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls 222 (671)
|+.+.+..+-.. .-...+..+.+|......
T Consensus 184 l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~ 213 (394)
T 4gt6_A 184 LTQIHIPAKVTR-IGTNAFSECFALSTITSD 213 (394)
T ss_dssp CSEEEECTTCCE-ECTTTTTTCTTCCEEEEC
T ss_pred eeEEEECCcccc-cccchhhhccccceeccc
Confidence 666666543221 222344555555555443
No 419
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.08 E-value=0.00032 Score=74.08 Aligned_cols=239 Identities=9% Similarity=0.002 Sum_probs=119.1
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCc
Q 005898 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (671)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (671)
+|.+|++|+.++|..+ +...-...|.++ +|+.+.+..+ +...-...|.. .+|+.+.+..+- ...-...|.+. +|
T Consensus 64 aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~-~~i~~~~F~~~-~l 137 (379)
T 4h09_A 64 NFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGAT-TEIGNYIFYNS-SV 137 (379)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTC-CEECTTTTTTC-CC
T ss_pred HhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcc-ccccccccccc-ee
Confidence 5778888888888654 443334456665 5777766543 43222233433 467777776542 21112223332 34
Q ss_pred CEEEcccccCCCCCcccccCCCCCCEEEeccCccccc------------------------------------cCCCCCC
Q 005898 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGS------------------------------------LPDLSSL 236 (671)
Q Consensus 193 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~------------------------------------~p~~~~l 236 (671)
+.+.+..+ ++..-...+..+.+++.+.+..+..... ...+...
T Consensus 138 ~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~ 216 (379)
T 4h09_A 138 KRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYG 216 (379)
T ss_dssp CEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTC
T ss_pred eeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccccc
Confidence 44444332 2212223445555555555543322100 0012333
Q ss_pred CCCCEEECCCCCCCCCCCC---CCCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEec
Q 005898 237 GSLNVLNLSDNKLDSNLPK---LPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNL 313 (671)
Q Consensus 237 ~~L~~L~Ls~N~l~~~~p~---~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 313 (671)
.+|+.+.+..+- ...-.. -...|..+.+..+ ++..-...|..+.+|+.+.+..+ +.......|..+++|+.+.+
T Consensus 217 ~~l~~i~~~~~~-~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 217 KNLKKITITSGV-TTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SSCSEEECCTTC-CEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred cccceeeeccce-eEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 444444443321 000000 1133455555443 33223345566666777766533 55555556667777777777
Q ss_pred ccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccC
Q 005898 314 ASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFR 362 (671)
Q Consensus 314 ~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~ 362 (671)
.++.++..-+..|..+.+|+.+++.++ ++-.-...+.++++|+.+.+.
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 766666444456666777777777544 442333455666666665554
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.07 E-value=1.4e-05 Score=80.23 Aligned_cols=144 Identities=12% Similarity=0.089 Sum_probs=92.4
Q ss_pred eeccCCce-EEEEEEEc-CCcEEEEEEccCCchhhHHHHHHHHHHHhcCC-CCCcccccceeecCCCCCCcccceEEEEE
Q 005898 490 IMGEGSYG-KLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (671)
Q Consensus 490 ~iG~G~~g-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~~~~~~~Lv~ 566 (671)
.+..|..| .||+-... ++..+.+|+-... ...++.+|.+.|+.+. +--+.++++++.+.+ ..++||
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--------~~~lvm 99 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--------DAWLLT 99 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--------EEEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--------eEEEEE
Confidence 44555555 68987754 4667888886432 3457888998888774 333567777777653 579999
Q ss_pred ecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 005898 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLH--------------------------------------- 607 (671)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH--------------------------------------- 607 (671)
|++++.++.+..... ...+..++.++++.|.-||
T Consensus 100 e~l~G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 100 TAIPGKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp ECCCSEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred EeeCCccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 999987765432210 0011122222222222222
Q ss_pred ------------CC----CCCCccccCCCCCceeecCCCcEEEcccCCccccccccccce
Q 005898 608 ------------TG----VIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGV 651 (671)
Q Consensus 608 ------------~~----~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~ 651 (671)
.. ..+.++|+|+.+.||++++++.+-|.||+.+...+-.|.++.
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gdp~~Dla~ 232 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAI 232 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEETHHHHHH
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCCHHHHHHH
Confidence 21 112479999999999999877777999999998886666654
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.04 E-value=9.8e-06 Score=85.44 Aligned_cols=153 Identities=10% Similarity=0.146 Sum_probs=94.6
Q ss_pred cCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCC--cccccceeecCCCCCCcccceEEE
Q 005898 487 MSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPH--LVCLLGHCIDGGGRDDYAVNKVFL 564 (671)
Q Consensus 487 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~~~~~~~~L 564 (671)
..+.++.|....+|+.+. +|..+++|.-... ..+.+|..++..+.... +.++++++.+.+ ...|+
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~-------g~~~l 111 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE-------SLTYC 111 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS-------SCEEE
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC-------CCeEE
Confidence 456789999999999875 5788899887533 25788888888876544 345666655432 24699
Q ss_pred EEecCCCCChhh------------------hhhcCCCC-----------------------------CCCCHHHH-----
Q 005898 565 VYEFMSNGNFRT------------------HISENTPG-----------------------------KVLNWSER----- 592 (671)
Q Consensus 565 v~Ey~~~GsL~~------------------~l~~~~~~-----------------------------~~l~~~~~----- 592 (671)
||||+++..+.+ .||..... ..-.|...
T Consensus 112 v~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~ 191 (362)
T 3ovc_A 112 ISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTV 191 (362)
T ss_dssp EEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTT
T ss_pred EEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999765531 11211100 00122211
Q ss_pred -HHHHHHHHHHHHHhcCC-CCCCccccCCCCCceeecCCCcEEEcccCCcccccccccccee
Q 005898 593 -LAVLIGVAKAVQFLHTG-VIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVR 652 (671)
Q Consensus 593 -~~i~~~ia~gl~yLH~~-~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~ 652 (671)
......+.+-.+++... ..+.++|+|+++.||+++++..+.|.||+.+...+-.+.++..
T Consensus 192 ~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd~~~Dla~~ 253 (362)
T 3ovc_A 192 SASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGDSQYEVANI 253 (362)
T ss_dssp HHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEECTHHHHHHH
T ss_pred cccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCCHHHHHHHH
Confidence 01111122223334221 1256899999999999988777889999999887744444544
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.99 E-value=4.3e-06 Score=87.89 Aligned_cols=161 Identities=7% Similarity=0.067 Sum_probs=94.4
Q ss_pred Ccee-ccCCceEEEEEEEc-------CCcEEEEEEccCCc---hhhHHHHHHHHHHHhcCC-C--CCcccccceeecCCC
Q 005898 488 SAIM-GEGSYGKLYKGRLE-------NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLR-H--PHLVCLLGHCIDGGG 553 (671)
Q Consensus 488 ~~~i-G~G~~g~Vy~~~~~-------~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~-H--~niv~l~g~~~~~~~ 553 (671)
.+.| +.|....+|+.... ++..+++|+-.... ......+.+|+++++.++ + ..+.++++++.+.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88999999998764 26678888865432 101245677888887774 2 245667777654320
Q ss_pred CCCcccceEEEEEecCCCCChhhhhhcC---CCCCCCCHHHHHHHHHH--------------------------------
Q 005898 554 RDDYAVNKVFLVYEFMSNGNFRTHISEN---TPGKVLNWSERLAVLIG-------------------------------- 598 (671)
Q Consensus 554 ~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~i~~~-------------------------------- 598 (671)
....++||||+++..+.+.+... .....++..++..++.+
T Consensus 105 -----~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~ 179 (357)
T 3ats_A 105 -----LGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLH 179 (357)
T ss_dssp -----TSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHH
T ss_pred -----cCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHH
Confidence 12358999999986654321000 00000111111111111
Q ss_pred ----------------------HHHHHHHhcCCC-------CCCccccCCCCCceeecCCCcEEEcccCCcccccccccc
Q 005898 599 ----------------------VAKAVQFLHTGV-------IPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV 649 (671)
Q Consensus 599 ----------------------ia~gl~yLH~~~-------~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~ 649 (671)
+.+.++++.+.. .+.++|+|+.+.||+++++..+.|.||+.+...+-.+.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~g~p~~Dl 259 (357)
T 3ats_A 180 RHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDV 259 (357)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCEEECHHHHH
T ss_pred HHHHHHHHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEcccccccCCcHHHH
Confidence 122334443221 346899999999999996545789999999888766666
Q ss_pred ceee
Q 005898 650 GVRL 653 (671)
Q Consensus 650 g~~l 653 (671)
+..+
T Consensus 260 a~~~ 263 (357)
T 3ats_A 260 AWMI 263 (357)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 423
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.84 E-value=2.1e-05 Score=83.90 Aligned_cols=45 Identities=20% Similarity=0.208 Sum_probs=36.3
Q ss_pred CCccccCCCCCceeecCCCcEEEcccCCccccccccccceeeeeee
Q 005898 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVRLLILM 657 (671)
Q Consensus 612 ~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~l~~~~ 657 (671)
+.++|+|+.+.||+++++ .+++.||..+...+-.+.+|..++.++
T Consensus 227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~G~p~~DLa~~l~~~~ 271 (397)
T 2olc_A 227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFYGPIGFDVGQFIANLF 271 (397)
T ss_dssp CEEECSCCSGGGEEECSS-CEEECCCTTCEEECTHHHHHHHHHHHH
T ss_pred CceeeCCCCcCcEEEeCC-CeEEEeCcccccCChHHhHHHHHHHHH
Confidence 478999999999999876 488999999988886666677655543
No 424
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.68 E-value=0.00015 Score=73.51 Aligned_cols=78 Identities=19% Similarity=0.164 Sum_probs=54.7
Q ss_pred CCcCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCC-CC--CcccccceeecCCCCCCcccce
Q 005898 485 FDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HP--HLVCLLGHCIDGGGRDDYAVNK 561 (671)
Q Consensus 485 f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~--niv~l~g~~~~~~~~~~~~~~~ 561 (671)
+...+.+|.|..+.||+.++.+|+.|.||+-..........|.+|.+.|+.+. .. -+.+.+++ +.
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~---------- 84 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD---------- 84 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET----------
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC----------
Confidence 44467789999999999999999999999876443333345788988888774 21 23333332 21
Q ss_pred EEEEEecCCCCCh
Q 005898 562 VFLVYEFMSNGNF 574 (671)
Q Consensus 562 ~~Lv~Ey~~~GsL 574 (671)
-++||||++.+..
T Consensus 85 ~~lv~e~l~~~~~ 97 (288)
T 3f7w_A 85 RTLAMEWVDERPP 97 (288)
T ss_dssp TEEEEECCCCCCC
T ss_pred ceEEEEeecccCC
Confidence 3799999987653
No 425
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.66 E-value=0.003 Score=66.48 Aligned_cols=240 Identities=10% Similarity=0.062 Sum_probs=138.7
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEEcccCcCCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCc
Q 005898 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (671)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (671)
++....+|+.+.+.. +++.+-..+|.++.+|+.++|..+ ++..-...|.++ +|+.+.+..+ +...-...|.. .+|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 455667788888864 455445567999999999999755 654455667776 7888887654 44232344544 479
Q ss_pred CEEEcccccCCCCCcc-cccCCCCCCEEEeccCccccccCCCCCCCCCCEEECCCCCCCCC-------------------
Q 005898 193 TFLSMRNNKLAGPFPS-SIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSN------------------- 252 (671)
Q Consensus 193 ~~L~L~~N~l~g~~p~-~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~~~------------------- 252 (671)
+.+.+..+- + .+.. .|.. .+|..+.+..+--.-....+..+.+++...+..+.....
T Consensus 116 ~~i~lp~~~-~-~i~~~~F~~-~~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (379)
T 4h09_A 116 DDFEFPGAT-T-EIGNYIFYN-SSVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPA 192 (379)
T ss_dssp SEEECCTTC-C-EECTTTTTT-CCCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCT
T ss_pred ccccCCCcc-c-ccccccccc-ceeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceeccccc
Confidence 999987653 2 2222 3333 366666665442211122366777777777665432110
Q ss_pred --------CCCC-----------CCCccEEEcCCCCCCCCchhhhcCCcccceeecccccccCCCccccCCCCCcCeEec
Q 005898 253 --------LPKL-----------PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNL 313 (671)
Q Consensus 253 --------~p~~-----------~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 313 (671)
+|.. ...+..+.+..+ ++..-...|..+..|+.+.+..+ ++.+....+.++.+|+.+.+
T Consensus 193 ~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l 270 (379)
T 4h09_A 193 AKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNF 270 (379)
T ss_dssp TCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccc
Confidence 0000 112333333222 22122334556666777776554 55555556667777777777
Q ss_pred ccCcCcccCCcccCCCCCccEEECcCCcCcccCCCCCCCCCCCceeccCC
Q 005898 314 ASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRG 363 (671)
Q Consensus 314 ~~N~l~g~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~l~~ 363 (671)
..+ ++..-...|..+.+|+.+++.++.++-.-...+.++.+|+.+.+..
T Consensus 271 ~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 271 YAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp CCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred ccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCc
Confidence 543 4333334566677777777777766644455666677777766643
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.66 E-value=0.00011 Score=76.37 Aligned_cols=43 Identities=19% Similarity=0.217 Sum_probs=35.2
Q ss_pred CCccccCCCCCceeecCCCcEEEcccCCccccccccccceeee
Q 005898 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVRLL 654 (671)
Q Consensus 612 ~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~l~ 654 (671)
+.++|+|+++.||+++.++.+.|.||+.+....-.+.++..+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~~~~Dla~~l~ 264 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMII 264 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCEECCTHHHHHHHHH
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhcccCChHHHHHHHHH
Confidence 5799999999999998778899999999987775555555443
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.41 E-value=4.5e-05 Score=70.96 Aligned_cols=82 Identities=10% Similarity=0.086 Sum_probs=34.3
Q ss_pred CCCEEEcccCcCCCCCCccCCCCCccCEEEccCCc-CCCCCCcccCCC----CCcCEEEccccc-CCCCCcccccCCCCC
Q 005898 143 SLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNF-FNNTIPNWFDSL----PSLTFLSMRNNK-LAGPFPSSIQRISTL 216 (671)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~g~~p~~l~~l~~L 216 (671)
+|+.|||+++.++..--..+.++++|++|+|+++. ++..--..++.+ ++|++|+|++|. ++..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 35555555544433222233444555555555442 221111122332 245555555543 432211234445555
Q ss_pred CEEEeccC
Q 005898 217 SDLDLSKN 224 (671)
Q Consensus 217 ~~L~Ls~N 224 (671)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 428
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.29 E-value=0.0004 Score=74.62 Aligned_cols=44 Identities=14% Similarity=0.203 Sum_probs=36.5
Q ss_pred CCccccCCCCCceeecCCCcEEEcccCCccccccccccceeeeee
Q 005898 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVRLLIL 656 (671)
Q Consensus 612 ~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~l~~~ 656 (671)
+.++|+|+++.||+++++. ++|.||+.+...+-.+.+|..+..+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~ 275 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNL 275 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHH
Confidence 4799999999999998776 9999999999888666667765443
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.12 E-value=9.1e-05 Score=68.88 Aligned_cols=84 Identities=10% Similarity=0.060 Sum_probs=62.7
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEEcccCc-CCCCCCccCCCC----CccCEEEccCCc-CCCCCCcccCCCCC
Q 005898 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNF-LFGSVPPKISTM----VKLQTLILDDNF-FNNTIPNWFDSLPS 191 (671)
Q Consensus 118 ~~L~~L~L~~n~l~g~~p~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 191 (671)
.+|+.|||+++.++..=-..+.++++|++|+|+++. ++..-=..+..+ ++|++|+|+++. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999998765433457899999999999985 554322345554 379999999974 65432245678999
Q ss_pred cCEEEccccc
Q 005898 192 LTFLSMRNNK 201 (671)
Q Consensus 192 L~~L~L~~N~ 201 (671)
|++|+++++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999985
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.94 E-value=0.002 Score=66.23 Aligned_cols=175 Identities=14% Similarity=0.151 Sum_probs=94.2
Q ss_pred cCHHHHHHHhcCCCc-----CceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCC--ccccc
Q 005898 473 FTLEELKEATNNFDM-----SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPH--LVCLL 545 (671)
Q Consensus 473 ~~~~~~~~~~~~f~~-----~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~ 545 (671)
++.+++......|.. .+.|+.|....+|+...++| .+++|...... ..+++..|++++..++... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 344555555555544 23467788899999887666 57788876521 1234556777766654222 23333
Q ss_pred ceeecCCCCCCc-ccceEEEEEecCCCCChhh--------------hhhcC----C-CC----CCCCHHHHHHH------
Q 005898 546 GHCIDGGGRDDY-AVNKVFLVYEFMSNGNFRT--------------HISEN----T-PG----KVLNWSERLAV------ 595 (671)
Q Consensus 546 g~~~~~~~~~~~-~~~~~~Lv~Ey~~~GsL~~--------------~l~~~----~-~~----~~l~~~~~~~i------ 595 (671)
... ++ .... .....+++|||+++..+.. .+|.. . +. ....|.....-
T Consensus 84 ~~~-~g--~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 84 PRK-DG--ELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBT-TC--CSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred CCC-CC--CEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 211 11 0000 0124689999999865321 12211 0 00 01235432111
Q ss_pred ------HHHHHHHHHHhcC----CCCCCccccCCCCCceeecCCCcEEEcccCCccccccccccceee
Q 005898 596 ------LIGVAKAVQFLHT----GVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVRL 653 (671)
Q Consensus 596 ------~~~ia~gl~yLH~----~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~l 653 (671)
...+.+.+++++. ...+.++|+|+.+.||+++++..+.|.||+.+....-.+.++..+
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g~~~~Dla~~l 228 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYDVSICL 228 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEEEHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccCchhHHHHHHHH
Confidence 0113445555542 122468999999999999987666899999998776555555544
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.88 E-value=0.0018 Score=65.95 Aligned_cols=149 Identities=8% Similarity=0.002 Sum_probs=80.6
Q ss_pred CceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCc-ccccceeecCCCCCCcccceEEEEE
Q 005898 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHL-VCLLGHCIDGGGRDDYAVNKVFLVY 566 (671)
Q Consensus 488 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~~~~~~~~Lv~ 566 (671)
.+.|+.|....+|+. ..+.+|+-...... ..+..+|.+.++.+....+ .++++++.+ .-++|+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~----------~~~~v~ 86 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPA----------TGVMVT 86 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT----------TCCEEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECC----------CCEEEE
Confidence 577899999999998 45778876543211 1122456666665543233 345544322 237999
Q ss_pred ecC-CCCChhh------------------hhhcCCCC--CCCCHHHHHHHHHH---------------HHHHH----HHh
Q 005898 567 EFM-SNGNFRT------------------HISENTPG--KVLNWSERLAVLIG---------------VAKAV----QFL 606 (671)
Q Consensus 567 Ey~-~~GsL~~------------------~l~~~~~~--~~l~~~~~~~i~~~---------------ia~gl----~yL 606 (671)
||+ ++.++.. -+|..... ...+...++.-... +.+.+ +.+
T Consensus 87 e~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 166 (301)
T 3dxq_A 87 RYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL 166 (301)
T ss_dssp ECCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred eecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 999 5433321 11221110 11111111111000 11111 122
Q ss_pred cC-CCCCCccccCCCCCceeecCCCcEEEcccCCccccccccccceee
Q 005898 607 HT-GVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVRL 653 (671)
Q Consensus 607 H~-~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~l 653 (671)
.. ...+.++|+|+.+.||+ .+++.+.+.||..+...+-.+.++..+
T Consensus 167 ~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~~~~Dla~~~ 213 (301)
T 3dxq_A 167 AAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMNDPLWDLGDLS 213 (301)
T ss_dssp HSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEECTHHHHHHHH
T ss_pred HhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccCCCHHHHHHHHH
Confidence 11 22345899999999999 566778999999998887666666554
No 432
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.84 E-value=0.019 Score=58.63 Aligned_cols=144 Identities=11% Similarity=0.144 Sum_probs=92.1
Q ss_pred cCceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCC---CCCcccccceeecCCCCCCcccceEE
Q 005898 487 MSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR---HPHLVCLLGHCIDGGGRDDYAVNKVF 563 (671)
Q Consensus 487 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~~~~~~~ 563 (671)
..+.|+.|.+..+|+... ++..++||.-... ....+.+|.+.|+.+. ...+.++++++...+ ..+
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--------~~~ 107 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--------HSF 107 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--------EEE
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--------ceE
Confidence 346789999999999875 4667888886532 3456888988887773 356777777765432 579
Q ss_pred EEEecCCCCChhh-----------hhhcCCC-C------------------CCCCHHHH-----HHHHHH----------
Q 005898 564 LVYEFMSNGNFRT-----------HISENTP-G------------------KVLNWSER-----LAVLIG---------- 598 (671)
Q Consensus 564 Lv~Ey~~~GsL~~-----------~l~~~~~-~------------------~~l~~~~~-----~~i~~~---------- 598 (671)
+||||+++..+.. .||.... . ..-+|... +.-..+
T Consensus 108 lvme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~ 187 (312)
T 3jr1_A 108 LLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFG 187 (312)
T ss_dssp EEEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCS
T ss_pred EEEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 9999999876421 2332211 0 01256532 211111
Q ss_pred ----HH-HHHHHhcC-CCCCCccccCCCCCceeecCCCcEEEcccCCccccc
Q 005898 599 ----VA-KAVQFLHT-GVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE 644 (671)
Q Consensus 599 ----ia-~gl~yLH~-~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~ 644 (671)
+. +..+.|.. ...|.++|+|+.+.|++++.++ +.|.||. +...+
T Consensus 188 ~~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~-~~~g~ 237 (312)
T 3jr1_A 188 NIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA-CYWGD 237 (312)
T ss_dssp CHHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC-CEEEC
T ss_pred HHHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc-cccCC
Confidence 11 12234432 2357899999999999999887 8899984 44444
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.65 E-value=0.0058 Score=63.05 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=34.3
Q ss_pred CCccccCCCCCceeecCC----CcEEEcccCCccccccccccceee
Q 005898 612 PGFFNNRVKTNNILLNEH----RIAKLSDYGLSIVSEDINSVGVRL 653 (671)
Q Consensus 612 ~~iiHrDlk~~NiLl~~~----~~~ki~DfGla~~~~d~~s~g~~l 653 (671)
+.++|+|+.+.||+++++ ..+.|.||+.+...+-.+.++..+
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~~~DLa~ll 228 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSLL 228 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECTTHHHHHHH
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCCHHHHHHHh
Confidence 469999999999999874 678999999998877555555543
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.60 E-value=0.027 Score=57.71 Aligned_cols=157 Identities=9% Similarity=0.105 Sum_probs=86.5
Q ss_pred ceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCC--cccccceeecCCCCCCcccceEEEEE
Q 005898 489 AIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPH--LVCLLGHCIDGGGRDDYAVNKVFLVY 566 (671)
Q Consensus 489 ~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~~~~~~~~Lv~ 566 (671)
..++ |....||+...++|+.+++|...... ...+++..|.+++..++... +++++.. ++... ....+..++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~-~~~~g~~~~l~ 106 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF--NGQTL-LNHQGFYFAVF 106 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTBSC-EEETTEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec--CCcEE-EEECCEEEEEE
Confidence 4466 77889999877778789999986321 12345667777777664222 4444443 21100 00013568899
Q ss_pred ecCCCCChhh-----------h---hhc----CC--CCCCCCHHHH----HHH---------------HHHHHHHHHHhc
Q 005898 567 EFMSNGNFRT-----------H---ISE----NT--PGKVLNWSER----LAV---------------LIGVAKAVQFLH 607 (671)
Q Consensus 567 Ey~~~GsL~~-----------~---l~~----~~--~~~~l~~~~~----~~i---------------~~~ia~gl~yLH 607 (671)
||+++..+.. . +|. .. .....++... ..+ ...+.+.++.+.
T Consensus 107 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (328)
T 1zyl_A 107 PSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVT 186 (328)
T ss_dssp ECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHH
Confidence 9998754320 1 121 00 0112333211 000 001112222222
Q ss_pred C----CCCCCccccCCCCCceeecCCCcEEEcccCCcccccccccccee
Q 005898 608 T----GVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVR 652 (671)
Q Consensus 608 ~----~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~ 652 (671)
. ...+.++|+|+++.||+++ + .+.|.||+.+...+-++.++..
T Consensus 187 ~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g~~~~Dla~~ 233 (328)
T 1zyl_A 187 AHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNGPAVQDLWML 233 (328)
T ss_dssp HHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEECTTHHHHTT
T ss_pred HHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcCcHHHHHHHH
Confidence 1 1224579999999999999 4 8999999998877644444443
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.56 E-value=0.0025 Score=68.45 Aligned_cols=155 Identities=19% Similarity=0.196 Sum_probs=91.0
Q ss_pred CceeccCCceEEEEEEEcC--------CcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCc-ccccceeecCCCCCCcc
Q 005898 488 SAIMGEGSYGKLYKGRLEN--------GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHL-VCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 488 ~~~iG~G~~g~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~~~ 558 (671)
.+.|+.|-...||+...++ +..+.+|+..... ..+.+.+|..+++.+...++ .++++.+. +
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~------ 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G------ 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T------
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C------
Confidence 4567888889999998753 4788888874321 12455678888887754444 45555442 1
Q ss_pred cceEEEEEecCCCCChhh--------------h---hhcCC-C-CCCCC--HHHHHHHHH--------------------
Q 005898 559 VNKVFLVYEFMSNGNFRT--------------H---ISENT-P-GKVLN--WSERLAVLI-------------------- 597 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~--------------~---l~~~~-~-~~~l~--~~~~~~i~~-------------------- 597 (671)
.+|+||+++.++.. . +|... + ..... |....++..
T Consensus 148 ----g~v~e~l~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~v~~~~~~ 223 (429)
T 1nw1_A 148 ----GRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEPDYLCEALQRWLKQLTGTVDAEHRFDLPEECGV 223 (429)
T ss_dssp ----EEEECCCCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCSSCCSSCHHHHHHHHHHHHHHHHSCTTCCEECCGGGSC
T ss_pred ----CEEEEEeCCcccChhhcCCHHHHHHHHHHHHHHhCCccccCCCcchHHHHHHHHHHHHHhhccccccccccccccc
Confidence 48999998633321 1 12211 1 11122 322112211
Q ss_pred ------HHHHHHHHhc----C-CCCCCccccCCCCCceeecCC----------------------------CcEEEcccC
Q 005898 598 ------GVAKAVQFLH----T-GVIPGFFNNRVKTNNILLNEH----------------------------RIAKLSDYG 638 (671)
Q Consensus 598 ------~ia~gl~yLH----~-~~~~~iiHrDlk~~NiLl~~~----------------------------~~~ki~DfG 638 (671)
.+.+.++++. . ...+.++|+|+.+.||+++++ ..+.|.||.
T Consensus 224 ~~~~~~~l~~~~~~l~~~l~~~~~~~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfE 303 (429)
T 1nw1_A 224 SSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFE 303 (429)
T ss_dssp CEECHHHHHHHHHHHHHHHTTCCCCEEEECSCCCGGGEEEEC------------------------------CCEECCCT
T ss_pred ccccHHHHHHHHHHHHHhccccCCCeEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecc
Confidence 1112222222 1 122358999999999999875 678999999
Q ss_pred Cccccccccccceeeeee
Q 005898 639 LSIVSEDINSVGVRLLIL 656 (671)
Q Consensus 639 la~~~~d~~s~g~~l~~~ 656 (671)
.+...+-.+.+|..+.+.
T Consensus 304 ya~~g~p~~DLA~~~~e~ 321 (429)
T 1nw1_A 304 YASYNYRAFDFANHFIEW 321 (429)
T ss_dssp TCEEEEHHHHHHHHHHHT
T ss_pred cCCcCccHHHHHHHHHHH
Confidence 999888666666655443
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.38 E-value=0.00068 Score=64.19 Aligned_cols=115 Identities=17% Similarity=0.166 Sum_probs=67.8
Q ss_pred hcccCCCCCCEEecccc-cccc----cCCccccCCCCCCEEEcccCcCCCC----CCccCCCCCccCEEEccCCcCCCC-
Q 005898 112 TTLARLTSLRVLSLVSL-GIWG----SLPDKIHRLYSLEYLDLSSNFLFGS----VPPKISTMVKLQTLILDDNFFNNT- 181 (671)
Q Consensus 112 ~~l~~l~~L~~L~L~~n-~l~g----~~p~~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~- 181 (671)
..+.+-+.|+.|+|++| .|.. .+-+.+..-+.|+.|+|++|.+... +...+..=+.|++|+|+.|.|+..
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34556678889999875 6632 2444566677888888888888532 223344456677888888877632
Q ss_pred ---CCcccCCCCCcCEEEccccc---CCC----CCcccccCCCCCCEEEeccCcc
Q 005898 182 ---IPNWFDSLPSLTFLSMRNNK---LAG----PFPSSIQRISTLSDLDLSKNAI 226 (671)
Q Consensus 182 ---~p~~~~~l~~L~~L~L~~N~---l~g----~~p~~l~~l~~L~~L~Ls~N~l 226 (671)
+-..+..-+.|+.|+|++|. +.. .+-..+..-++|+.|+++.|.+
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 22234444567777776542 221 1222334445666666666543
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.25 E-value=0.0073 Score=53.16 Aligned_cols=37 Identities=24% Similarity=0.451 Sum_probs=26.3
Q ss_pred ccceeecccccccCCCccccCCCCCcCeEecccCcCc
Q 005898 283 QLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (671)
Q Consensus 283 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (671)
+|+.|+|++|+|+.+++..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4667777777777777766777777777777777664
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.21 E-value=0.0053 Score=64.65 Aligned_cols=157 Identities=17% Similarity=0.132 Sum_probs=92.2
Q ss_pred CceeccCCceEEEEEEEc--------CCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCc-ccccceeecCCCCCCcc
Q 005898 488 SAIMGEGSYGKLYKGRLE--------NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHL-VCLLGHCIDGGGRDDYA 558 (671)
Q Consensus 488 ~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~~~ 558 (671)
.+.+..|-...+|+.... +++.+.+|+-... ........+|.++++.+.-..+ .++++++.+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~-------- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE-------- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT--------
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC--------
Confidence 356777888889998864 2468888886332 1234566788888877743333 455554421
Q ss_pred cceEEEEEecCCCCChhh-----------------hhhcCC--CCCCCC--HHHHHHHHHHHH-----------------
Q 005898 559 VNKVFLVYEFMSNGNFRT-----------------HISENT--PGKVLN--WSERLAVLIGVA----------------- 600 (671)
Q Consensus 559 ~~~~~Lv~Ey~~~GsL~~-----------------~l~~~~--~~~~l~--~~~~~~i~~~ia----------------- 600 (671)
.+||||+++..+.. -+|... -.+... |.+..++..++.
T Consensus 126 ----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 201 (379)
T 3feg_A 126 ----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYS 201 (379)
T ss_dssp ----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTT
T ss_pred ----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHH
Confidence 39999999755431 112211 012233 333333332221
Q ss_pred --HHHHHh----cC-CCCCCccccCCCCCceeecCC----CcEEEcccCCccccccccccceeeeeee
Q 005898 601 --KAVQFL----HT-GVIPGFFNNRVKTNNILLNEH----RIAKLSDYGLSIVSEDINSVGVRLLILM 657 (671)
Q Consensus 601 --~gl~yL----H~-~~~~~iiHrDlk~~NiLl~~~----~~~ki~DfGla~~~~d~~s~g~~l~~~~ 657 (671)
+.+++| .. .....++|+|+.+.||+++++ +.+.+.||..+...+-.|.+|..+.+++
T Consensus 202 l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~~~~Dla~~~~~~~ 269 (379)
T 3feg_A 202 LKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRGFDIGNHFCEWV 269 (379)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCChHHHHHHHHHHHH
Confidence 122333 22 222368999999999999876 7899999999999887777787776655
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.06 E-value=0.0092 Score=52.48 Aligned_cols=11 Identities=36% Similarity=0.232 Sum_probs=4.1
Q ss_pred CCEEEcccCcC
Q 005898 144 LEYLDLSSNFL 154 (671)
Q Consensus 144 L~~L~Ls~N~l 154 (671)
|++|+|++|+|
T Consensus 33 l~~L~Ls~N~l 43 (130)
T 3rfe_A 33 TTELVLTGNNL 43 (130)
T ss_dssp CSEEECTTSCC
T ss_pred CCEEECCCCcC
Confidence 33333333333
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.04 E-value=0.0036 Score=65.76 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=35.0
Q ss_pred CCccccCCCCCceeecCCCcEEEcccCCccccccccccceeeeee
Q 005898 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVRLLIL 656 (671)
Q Consensus 612 ~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~l~~~ 656 (671)
+.++|+|+++.||+++++. +.|.||..+...+-.+.+|..+.++
T Consensus 212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~g~~~~Dla~~~~~~ 255 (369)
T 3c5i_A 212 IVFCHNDLQENNIINTNKC-LRLIDFEYSGFNFLATDIANFFIET 255 (369)
T ss_dssp EEEECSCCCGGGEEECC-C-EEECCCTTCEEEEHHHHHHHHHHGG
T ss_pred eEEEeCCCCcccEEecCCc-EEEEEecCCCCCchHHHHHHHHHHH
Confidence 3589999999999998655 8999999998887666667666554
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.00 E-value=0.011 Score=63.84 Aligned_cols=74 Identities=15% Similarity=0.068 Sum_probs=45.6
Q ss_pred CceeccCCceEEEEEEEcC-CcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCcc-cccceeecCCCCCCcccceEEEE
Q 005898 488 SAIMGEGSYGKLYKGRLEN-GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLV-CLLGHCIDGGGRDDYAVNKVFLV 565 (671)
Q Consensus 488 ~~~iG~G~~g~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~~~~~~~~~Lv 565 (671)
.+.|+.|-...+|+....+ +..+.+|+....... .-+-.+|..++..+...+++ ++++.+. + .+|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~----------G~v 179 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N----------GRI 179 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T----------EEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C----------eEE
Confidence 3567888889999998765 477888876432211 11125778888877655554 5665542 1 359
Q ss_pred EecCCCCCh
Q 005898 566 YEFMSNGNF 574 (671)
Q Consensus 566 ~Ey~~~GsL 574 (671)
|||+++.++
T Consensus 180 ~e~I~G~~l 188 (458)
T 2qg7_A 180 EEFMDGYAL 188 (458)
T ss_dssp EECCCSEEC
T ss_pred EEeeCCccC
Confidence 999987443
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.57 E-value=0.0024 Score=60.35 Aligned_cols=88 Identities=11% Similarity=0.155 Sum_probs=50.7
Q ss_pred cccCCCCCCEEEcccC-cCCC----CCCccCCCCCccCEEEccCCcCCCC----CCcccCCCCCcCEEEcccccCCCC--
Q 005898 137 KIHRLYSLEYLDLSSN-FLFG----SVPPKISTMVKLQTLILDDNFFNNT----IPNWFDSLPSLTFLSMRNNKLAGP-- 205 (671)
Q Consensus 137 ~~~~L~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~g~-- 205 (671)
.+.+-+.|++|+|++| .+.. .+-..+..-+.|+.|+|++|.+... +...+..-+.|++|+|++|+|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 4556678999999885 6632 1233455556777777777776521 222333445677777777776521
Q ss_pred --CcccccCCCCCCEEEeccC
Q 005898 206 --FPSSIQRISTLSDLDLSKN 224 (671)
Q Consensus 206 --~p~~l~~l~~L~~L~Ls~N 224 (671)
+-+.+..-+.|+.|+|++|
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHhhCCceeEEECCCC
Confidence 1122333455666666643
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.88 E-value=0.13 Score=53.10 Aligned_cols=42 Identities=7% Similarity=0.113 Sum_probs=34.7
Q ss_pred CCccccCCCCCceeecCCCcEEEcccCCccccccccccceee
Q 005898 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVRL 653 (671)
Q Consensus 612 ~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~l 653 (671)
+.++|+|+.+.||++++++.+.|.||+.+...+-.+.++..+
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~~~~Dla~~~ 247 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKERDLMFIG 247 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEECTHHHHTTTT
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCCHHHHHHHHH
Confidence 468999999999999988889999999998877555555544
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.86 E-value=0.041 Score=58.13 Aligned_cols=46 Identities=26% Similarity=0.221 Sum_probs=40.2
Q ss_pred CCccccCCCCCceeecCC------CcEEEcccCCccccccccccceeeeeee
Q 005898 612 PGFFNNRVKTNNILLNEH------RIAKLSDYGLSIVSEDINSVGVRLLILM 657 (671)
Q Consensus 612 ~~iiHrDlk~~NiLl~~~------~~~ki~DfGla~~~~d~~s~g~~l~~~~ 657 (671)
..++|+|+.+.||+++++ +.+.+.||-.|...+-.|.+|..+.+++
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~~~~~~Dla~~~~e~~ 295 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWM 295 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEEEEHHHHHHHHHHHTT
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCCcCChHHHHHHHHHHHH
Confidence 358999999999999876 7899999999999888888888877765
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.40 E-value=0.049 Score=58.06 Aligned_cols=44 Identities=18% Similarity=0.262 Sum_probs=37.5
Q ss_pred CccccCCCCCceeecCCCcEEEcccCCccccccccccceeeeeee
Q 005898 613 GFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGVRLLILM 657 (671)
Q Consensus 613 ~iiHrDlk~~NiLl~~~~~~ki~DfGla~~~~d~~s~g~~l~~~~ 657 (671)
.++|+|+.+.||+ ++++.+.+.||..+...+-.|.+|..+.+.+
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~~~~~Dla~~~~~~~ 306 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAINFAGADIANYFCEYI 306 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEEEEHHHHHHHHHHTTT
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCCcCChHHHHHHHHHHHH
Confidence 5899999999999 8888999999999998887777777665544
No 446
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=87.84 E-value=0.068 Score=57.77 Aligned_cols=61 Identities=13% Similarity=0.103 Sum_probs=18.1
Q ss_pred cCceeccCCceEEEEEEEcC-CcEEEE------EEccCCc--hhhHHHHHHHHHHHhcCCCCCcccccceeec
Q 005898 487 MSAIMGEGSYGKLYKGRLEN-GTSVAI------RCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCID 550 (671)
Q Consensus 487 ~~~~iG~G~~g~Vy~~~~~~-g~~vAv------K~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 550 (671)
..+.+| ||.||+|.+.. ..+||| |..+... ......|.+|..++.+.+|||+++..++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 345666 99999999864 468999 7665432 2234568889999999999999999887643
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=85.14 E-value=0.94 Score=47.68 Aligned_cols=44 Identities=27% Similarity=0.314 Sum_probs=35.1
Q ss_pred ccccCCCCCceee------cCCCcEEEcccCCccccccccccceeeeeee
Q 005898 614 FFNNRVKTNNILL------NEHRIAKLSDYGLSIVSEDINSVGVRLLILM 657 (671)
Q Consensus 614 iiHrDlk~~NiLl------~~~~~~ki~DfGla~~~~d~~s~g~~l~~~~ 657 (671)
++|.|+.+.||++ +++..+.+.||-+|....-.+.+|-.+.|++
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~~~fDlan~f~ew~ 295 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWM 295 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEEHHHHHHHHHHHTT
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccCCCchHhHHHHHHHHh
Confidence 5799999999999 4457799999999998876666676665543
No 448
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=80.50 E-value=0.39 Score=31.88 Aligned_cols=29 Identities=31% Similarity=0.421 Sum_probs=16.8
Q ss_pred CccceeeeehhhHHHHHHHHHHhheeeee
Q 005898 393 NVGKLVGIIVGVLVIMVLLAFGFLVVCRR 421 (671)
Q Consensus 393 ~~~~~igiivg~~v~l~l~~~~~~~~~rr 421 (671)
+.+.+.|+++++++.+.+++.+.++++||
T Consensus 9 s~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 45567788887776655554444444343
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=78.67 E-value=0.66 Score=31.80 Aligned_cols=15 Identities=20% Similarity=0.545 Sum_probs=6.3
Q ss_pred ceeeeehhhHHHHHH
Q 005898 396 KLVGIIVGVLVIMVL 410 (671)
Q Consensus 396 ~~igiivg~~v~l~l 410 (671)
+..+++.|+++++++
T Consensus 13 IA~gVVgGv~~~~ii 27 (44)
T 2ks1_B 13 IATGMVGALLLLLVV 27 (44)
T ss_dssp STHHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHHHH
Confidence 334444444443333
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=78.67 E-value=0.49 Score=32.36 Aligned_cols=15 Identities=20% Similarity=0.667 Sum_probs=6.1
Q ss_pred ceeeeehhhHHHHHH
Q 005898 396 KLVGIIVGVLVIMVL 410 (671)
Q Consensus 396 ~~igiivg~~v~l~l 410 (671)
+..|++.|+++++++
T Consensus 12 IA~gVVgGv~~v~ii 26 (44)
T 2l2t_A 12 IAAGVIGGLFILVIV 26 (44)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred EEEeehHHHHHHHHH
Confidence 334444444443333
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=67.74 E-value=1 Score=30.75 Aligned_cols=25 Identities=28% Similarity=0.674 Sum_probs=11.0
Q ss_pred ceeeeehhhHHHHHHHHHHhheeeee
Q 005898 396 KLVGIIVGVLVIMVLLAFGFLVVCRR 421 (671)
Q Consensus 396 ~~igiivg~~v~l~l~~~~~~~~~rr 421 (671)
.+++.++|++ ++++++++++++.||
T Consensus 13 ~Ia~~vVGvl-l~vi~~l~~~~~~RR 37 (44)
T 2jwa_A 13 SIISAVVGIL-LVVVLGVVFGILIKR 37 (44)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred chHHHHHHHH-HHHHHHHHHHhheeh
Confidence 3445555533 333334444444344
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=62.48 E-value=13 Score=35.07 Aligned_cols=87 Identities=13% Similarity=0.170 Sum_probs=59.0
Q ss_pred cCCCCCcccccceeecCCCCCCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 005898 535 KLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGF 614 (671)
Q Consensus 535 ~l~H~niv~l~g~~~~~~~~~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~i 614 (671)
.-.||++++. .+-.+. +.+.+.|+ ...+...|-.- +.++-..|++++..|+.-.++++..
T Consensus 41 ~~~~~~Fl~~-~I~e~e--------D~v~~~y~--~~~~~~~f~~i----k~~~~~eKlr~l~ni~~l~~~~~~r----- 100 (215)
T 4ann_A 41 EQHSPYFIDA-ELTELR--------DSFQIHYD--INDNHTPFDNI----KSFTKNEKLRYLLNIKNLEEVNRTR----- 100 (215)
T ss_dssp GSCCTTBCCE-EEEECS--------SEEEEEEC--CCTTSEEGGGG----GGSCHHHHHHHHHHGGGGGGGGGSS-----
T ss_pred hccCCcccce-EEEEcc--------cEEEEEEE--cCcccCCHHHH----HhcCHHHHHHHHHHHHHHHHHhcCc-----
Confidence 3468888865 232222 24444444 43333333211 1277889999999999877777754
Q ss_pred cccCCCCCceeecCCCcEEEcccCCcc
Q 005898 615 FNNRVKTNNILLNEHRIAKLSDYGLSI 641 (671)
Q Consensus 615 iHrDlk~~NiLl~~~~~~ki~DfGla~ 641 (671)
+|=-+.|+||++|.++.|++.=.|+.-
T Consensus 101 ~tf~L~P~NL~f~~~~~p~i~~RGik~ 127 (215)
T 4ann_A 101 YTFVLAPDELFFTRDGLPIAKTRGLQN 127 (215)
T ss_dssp EECCCSGGGEEECTTSCEEESCCEETT
T ss_pred eEEEEecceEEEcCCCCEEEEEccCcc
Confidence 677889999999999999999888743
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=56.29 E-value=17 Score=34.31 Aligned_cols=51 Identities=14% Similarity=0.090 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHHHHHHHH-HhcCCCCCCccccCCCCCceeecCCCcEEEcccCCccc
Q 005898 587 LNWSERLAVLIGVAKAVQ-FLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (671)
Q Consensus 587 l~~~~~~~i~~~ia~gl~-yLH~~~~~~iiHrDlk~~NiLl~~~~~~ki~DfGla~~ 642 (671)
++-..|++++..++.-.. +++.. +|=-+.|+||++|.++.|++.=.|+-..
T Consensus 82 ~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~~~~p~i~hRGi~~~ 133 (219)
T 4ano_A 82 TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNRALEPFFLHVGVKES 133 (219)
T ss_dssp SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECTTCCEEESCCEETTT
T ss_pred cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeCCCcEEEEEcCCccc
Confidence 778899999999988777 66654 6778889999999999999999987543
No 454
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=33.22 E-value=9.8 Score=24.21 Aligned_cols=26 Identities=42% Similarity=0.713 Sum_probs=16.8
Q ss_pred CccceeeeehhhHHHHHHHHHHhhee
Q 005898 393 NVGKLVGIIVGVLVIMVLLAFGFLVV 418 (671)
Q Consensus 393 ~~~~~igiivg~~v~l~l~~~~~~~~ 418 (671)
+.+.+.|++++.++..++++..++++
T Consensus 5 ~~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 5 SPGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEeEeHHHHHHHHHHHHHHhhe
Confidence 34566778877777666666655554
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=31.08 E-value=17 Score=24.07 Aligned_cols=6 Identities=33% Similarity=0.739 Sum_probs=2.3
Q ss_pred heeeee
Q 005898 416 LVVCRR 421 (671)
Q Consensus 416 ~~~~rr 421 (671)
++++||
T Consensus 34 ~~~~rR 39 (41)
T 2k9y_A 34 FFIHRR 39 (41)
T ss_dssp HSSSSS
T ss_pred eeEeee
Confidence 333333
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=27.80 E-value=2.5e+02 Score=28.16 Aligned_cols=143 Identities=15% Similarity=0.126 Sum_probs=71.7
Q ss_pred ceeccCCceEEEEEEEcCCcEEEEEEccCCchhhHHHHHHHHHHHhcCCCCCccccccee------------e-cCCCC-
Q 005898 489 AIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHC------------I-DGGGR- 554 (671)
Q Consensus 489 ~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~------------~-~~~~~- 554 (671)
+..-.|..| ||.... ++..|.||... ....+-+-.+++..-.+.-|+.--+ .+. . +..+.
T Consensus 75 ~~s~~Gstg-vff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv-~~~~~E~~e~~~~L~~~~~~~~~ 148 (342)
T 1cja_A 75 ERSEKGTEG-LFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVV-SSNSEEGTNMLECLAAIDKSFRV 148 (342)
T ss_dssp EECCSTTSC-EEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEE-ESSSHHHHHHHHHHHHHCSSSCH
T ss_pred EeccCCCCC-eEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEE-eeCcHHHHHHHHHHHHhhhhhHH
Confidence 344555555 444444 57788899542 2233445556655555665653111 100 0 00000
Q ss_pred -CCcccceEEEEEecCCCCChhhhhhcCCCCCCCCHHH----HHHHHHHHHHHHHHhcCCCC--CCccccCCCCCceeec
Q 005898 555 -DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSE----RLAVLIGVAKAVQFLHTGVI--PGFFNNRVKTNNILLN 627 (671)
Q Consensus 555 -~~~~~~~~~Lv~Ey~~~GsL~~~l~~~~~~~~l~~~~----~~~i~~~ia~gl~yLH~~~~--~~iiHrDlk~~NiLl~ 627 (671)
........+++|||.++-.|.+.-+ ..|.. +..-..+-.-+++++..+.. |-+.+.---+.||+++
T Consensus 149 l~~l~~~~~~l~meyv~G~~L~e~~~-------~~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~ 221 (342)
T 1cja_A 149 ITTLANQANILLMELVRGITLNKLTT-------TSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLS 221 (342)
T ss_dssp HHHHTTCSEEEEEECCCEEESTTCCS-------SSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEE
T ss_pred HHHhhcccceehhhhcCCCccccchh-------hhhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEe
Confidence 0001124679999999655433211 11222 11112222345666665432 3233233578899998
Q ss_pred CCCc-EEEcccCCccccc
Q 005898 628 EHRI-AKLSDYGLSIVSE 644 (671)
Q Consensus 628 ~~~~-~ki~DfGla~~~~ 644 (671)
++.. +.+.|-+++..-+
T Consensus 222 ~~n~~~~~IDhn~af~~~ 239 (342)
T 1cja_A 222 ERGATVVPIDSKIIPLDA 239 (342)
T ss_dssp SBTTCEEECSCCCCCCCS
T ss_pred CCCCeEEEEcCCccccCC
Confidence 7554 8899999987644
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.16 E-value=1.1e+02 Score=24.57 Aligned_cols=13 Identities=38% Similarity=0.442 Sum_probs=5.5
Q ss_pred cCCCCCccCEEEc
Q 005898 161 KISTMVKLQTLIL 173 (671)
Q Consensus 161 ~~~~l~~L~~L~L 173 (671)
.|.++.+|+.+.+
T Consensus 38 aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 38 MFSGCTALEKLIL 50 (100)
T ss_dssp SSTTCTTCCCEEE
T ss_pred HHhccCCccEEEE
Confidence 3444444444443
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=20.74 E-value=2.5e+02 Score=22.42 Aligned_cols=45 Identities=11% Similarity=0.148 Sum_probs=27.8
Q ss_pred CCCCCCccCCCCCccCEEEccCCcCCCCCCcccCCCCCcCEEEccc
Q 005898 154 LFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRN 199 (671)
Q Consensus 154 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (671)
++..-...|.++++|+.+.+..+ ++..-...|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33333456677777777777654 3333345677777777777754
No 459
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=20.56 E-value=36 Score=32.35 Aligned_cols=41 Identities=12% Similarity=0.086 Sum_probs=30.3
Q ss_pred cCCCcEEEcccCCccccccccccceeeeeeehhhhcc----ccccccCC
Q 005898 627 NEHRIAKLSDYGLSIVSEDINSVGVRLLILMSFFFGS----MTSCSKFL 671 (671)
Q Consensus 627 ~~~~~~ki~DfGla~~~~d~~s~g~~l~~~~~~~~~~----~~~~~~~~ 671 (671)
|....--|+|||+-. .-..|.+|+.+--|...- .+||.|++
T Consensus 67 d~~LGWDITDfG~gd----F~~~GL~LfT~rNG~~~d~~~~k~YaeK~L 111 (246)
T 3kmh_A 67 DLKLGWDVTAFGRNN----FAAHGLTLFTLRNGSAKGMPYVKCYAEKIM 111 (246)
T ss_dssp HTTCEEEEECTTSSC----TTTBCEEEEEEECCCTTSCSCCCCEEEEEE
T ss_pred hcccCcEEecCCCCc----hhhcCCEEEEEECCCCccccCCCcceeeEe
Confidence 444566799999854 445799999988766654 49999974
Done!