BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005900
(671 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2FTS|A Chain A, Crystal Structure Of The Glycine Receptor-Gephyrin Complex
pdb|2FU3|A Chain A, Crystal Structure Of Gephyrin E-Domain
pdb|2FU3|B Chain B, Crystal Structure Of Gephyrin E-Domain
Length = 419
Score = 317 bits (813), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 257/405 (63%), Gaps = 18/405 (4%)
Query: 16 MISAEEALQKVLSVAQRLPPVTVPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAVVASD 75
+ S ++A VL + L + + +G+VLA+D+ A D LPP+PASVKDGYAV A+D
Sbjct: 6 LTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAAD 65
Query: 76 GPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEVNHT--AAE 133
GPG+ +I ES+AG ++ G V VTTG PIP GADAVVQVEDT+ + + E
Sbjct: 66 GPGDRFIIGESQAGEQPTQTVM-PGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTE 124
Query: 134 SKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKVYRTPTI 193
V+ILVQ G DIRP+G+DI++ +L G +G SEIGLLAT G+ V+V + P +
Sbjct: 125 ELEVRILVQARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVV 184
Query: 194 AVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEELEKTLDN 253
AV+STG+EL+ P L G+IRDSNR+ LLA + I+LGIV D+ ++L L+
Sbjct: 185 AVMSTGNELLNPEDDLLP-GKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNE 243
Query: 254 AFSAGIDILLTSGGVSMGDKDFVKPLL--QKKGTIYFNKVCMKPGKPLTFAEINIKPTDD 311
S D+++TSGGVSMG+KD++K +L I+F +V MKPG P TFA ++I
Sbjct: 244 GISRA-DVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDID---- 298
Query: 312 VMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHLLRVPARICQPLKTDRVRPE 371
V KI+ F LPGNPVS +V +L++VPA+R + G +P + AR+ +K D RPE
Sbjct: 299 -GVRKII-FALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDP-RPE 355
Query: 372 FHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLELP 416
+HR IL W + A+STG+QMSSRL+SM+SAN LL LP
Sbjct: 356 YHRCILTWHHQEPLPW----AQSTGNQMSSRLMSMRSANGLLMLP 396
>pdb|1T3E|A Chain A, Structural Basis Of Dynamic Glycine Receptor Clustering
pdb|1T3E|B Chain B, Structural Basis Of Dynamic Glycine Receptor Clustering
Length = 421
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 257/405 (63%), Gaps = 18/405 (4%)
Query: 16 MISAEEALQKVLSVAQRLPPVTVPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAVVASD 75
+ S ++A VL + L + + +G+VLA+D+ A D LPP+PASVKDGYAV A+D
Sbjct: 8 LTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAAD 67
Query: 76 GPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEVNHT--AAE 133
GPG+ +I ES+AG ++ G V VTTG PIP GADAVVQVEDT+ + + E
Sbjct: 68 GPGDRFIIGESQAGEQPTQTVM-PGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTE 126
Query: 134 SKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKVYRTPTI 193
V+ILVQ G DIRP+G+DI++ +L G +G SEIGLLAT G+ V+V + P +
Sbjct: 127 ELEVRILVQARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVV 186
Query: 194 AVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEELEKTLDN 253
AV+STG+EL+ P L G+IRDSNR+ LLA + I+LGIV D+ ++L L+
Sbjct: 187 AVMSTGNELLNPEDDLLP-GKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNE 245
Query: 254 AFSAGIDILLTSGGVSMGDKDFVKPLL--QKKGTIYFNKVCMKPGKPLTFAEINIKPTDD 311
S D+++TSGGVSMG+KD++K +L I+F +V MKPG P TFA ++I
Sbjct: 246 GISRA-DVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDID---- 300
Query: 312 VMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHLLRVPARICQPLKTDRVRPE 371
V KI+ F LPGNPVS +V +L++VPA+R + G +P + AR+ +K D RPE
Sbjct: 301 -GVRKII-FALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDP-RPE 357
Query: 372 FHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLELP 416
+HR IL W + A+STG+QMSSRL+SM+SAN LL LP
Sbjct: 358 YHRCILTWHHQEPLPW----AQSTGNQMSSRLMSMRSANGLLMLP 398
>pdb|1UUY|A Chain A, Structure Of A Molybdopterin-Bound Cnx1g Domain Links
Molybdenum And Copper Metabolism
Length = 167
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 160/163 (98%)
Query: 471 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 530
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 531 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 590
+WSD+D+MDLILTLGGTGFTPRDVTPEATK++IERETPGLL+VMMQESLK+TPFAML+RS
Sbjct: 65 KWSDVDEMDLILTLGGTGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLARS 124
Query: 591 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 633
AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR
Sbjct: 125 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 167
>pdb|1O8Q|A Chain A, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|B Chain B, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|C Chain C, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|D Chain D, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|E Chain E, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|F Chain F, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|G Chain G, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|H Chain H, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
Length = 167
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 160/163 (98%)
Query: 471 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 530
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 531 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 590
+WSD+D+MDLILTLGGTGFTPRDVTPEATK++IERETPGLL+VMMQE+LK+TPFAMLSRS
Sbjct: 65 KWSDVDEMDLILTLGGTGFTPRDVTPEATKKVIERETPGLLFVMMQEALKITPFAMLSRS 124
Query: 591 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 633
AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR
Sbjct: 125 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 167
>pdb|1O8N|A Chain A, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
pdb|1O8N|B Chain B, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
pdb|1O8N|C Chain C, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
Length = 167
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 159/163 (97%)
Query: 471 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 530
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 531 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 590
+WSD+D+MDLILTLGG GFTPRDVTPEATK++IERETPGLL+VMMQESLK+TPFAMLSRS
Sbjct: 65 KWSDVDEMDLILTLGGAGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLSRS 124
Query: 591 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 633
AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR
Sbjct: 125 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 167
>pdb|1O8O|A Chain A, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
pdb|1O8O|B Chain B, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
pdb|1O8O|C Chain C, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
Length = 167
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 159/163 (97%)
Query: 471 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 530
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 531 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 590
+WSD+D+MDLILTLGG GFTPRDVTPEATK++IERETPGLL+VMMQESLK+TPFAMLSRS
Sbjct: 65 KWSDVDEMDLILTLGGDGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLSRS 124
Query: 591 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 633
AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR
Sbjct: 125 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 167
>pdb|1UUX|A Chain A, Structure Of A Molybdopterin-Bound Cnx1g Domain Links
Molybdenum And Copper Metabolism
Length = 163
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 139/158 (87%), Positives = 155/158 (98%)
Query: 471 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 530
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 531 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 590
+WSD+D+MDLILTLGGTGFTPRDVTPEATK++IERETPGLL+VMMQESLK+TPFAMLSRS
Sbjct: 65 KWSDVDEMDLILTLGGTGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLSRS 124
Query: 591 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQI 628
AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQI
Sbjct: 125 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQI 162
>pdb|1EAV|A Chain A, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|B Chain B, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|C Chain C, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|D Chain D, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|E Chain E, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|F Chain F, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|G Chain G, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|H Chain H, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
Length = 162
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 133/158 (84%), Positives = 149/158 (94%)
Query: 471 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 530
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 531 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 590
+WSD+D+ DLILTLGGTGFTPRDVTPEATK++IERETPGLL+V QESLK+TPFA LSRS
Sbjct: 65 KWSDVDEXDLILTLGGTGFTPRDVTPEATKKVIERETPGLLFVXXQESLKITPFAXLSRS 124
Query: 591 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQI 628
AAGIRGSTLIIN PGNPNAVAEC EALLPALKHALKQI
Sbjct: 125 AAGIRGSTLIINXPGNPNAVAECXEALLPALKHALKQI 162
>pdb|1G8L|A Chain A, Crystal Structure Of Escherichia Coli Moea
pdb|1G8L|B Chain B, Crystal Structure Of Escherichia Coli Moea
pdb|1G8R|A Chain A, Moea
pdb|1G8R|B Chain B, Moea
Length = 411
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 142/409 (34%), Positives = 213/409 (52%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + TG P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMTGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQU|A Chain A, Moea E188q
pdb|2NQU|B Chain B, Moea E188q
Length = 411
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 213/409 (52%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + TG P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMTGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGD+L P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDQLQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NRO|A Chain A, Moea K279q
pdb|2NRO|B Chain B, Moea K279q
Length = 411
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 213/409 (52%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + TG P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMTGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ ++PGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIQPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQR|A Chain A, Moea D142n
pdb|2NQR|B Chain B, Moea D142n
Length = 411
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 213/409 (52%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + TG P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMTGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G +I A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGENISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQK|A Chain A, Moea D59n Mutant
pdb|2NQK|B Chain B, Moea D59n Mutant
Length = 411
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 213/409 (52%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S +GYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMNGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + TG P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMTGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQQ|A Chain A, Moea R137q
pdb|2NQQ|B Chain B, Moea R137q
pdb|2NQQ|C Chain C, Moea R137q
pdb|2NQQ|D Chain D, Moea R137q
Length = 411
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 213/409 (52%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + TG P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMTGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +I+ G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIQRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQM|A Chain A, Moea T100a Mutant
pdb|2NQM|B Chain B, Moea T100a Mutant
Length = 411
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 212/409 (51%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + G P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMAGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|1FC5|A Chain A, Crystal Structure Of Molybdopterin Biosynthesis Moea
Protein
pdb|1FC5|B Chain B, Crystal Structure Of Molybdopterin Biosynthesis Moea
Protein
Length = 411
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/409 (34%), Positives = 210/409 (51%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
+ S + AL + LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LXSLDTALNEXLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAXDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + TG P+P+G +AVV E T++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIXTGAPVPEGCEAVVXQEQTEQX 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLXLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NRS|A Chain A, Moea S371w
pdb|2NRS|B Chain B, Moea S371w
Length = 411
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 212/409 (51%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + TG P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMTGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGWHIFSSFSLGNCFIVL 386
>pdb|2NQN|A Chain A, Moea T100w
pdb|2NQN|B Chain B, Moea T100w
Length = 411
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 212/409 (51%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + G P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMWGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQS|A Chain A, Moea E188a
pdb|2NQS|B Chain B, Moea E188a
Length = 411
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 212/409 (51%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + TG P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMTGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGD L P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDALQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NRP|A Chain A, Moea R350a
pdb|2NRP|B Chain B, Moea R350a
Length = 411
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 212/409 (51%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + TG P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMTGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD L
Sbjct: 175 IRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQAGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQV|A Chain A, Moea D228a
pdb|2NQV|B Chain B, Moea D228a
Length = 411
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 212/409 (51%), Gaps = 38/409 (9%)
Query: 16 MISAEEALQKVLSVAQRLPPVT----VPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAV 71
++S + AL ++LS R+ P+T +PL + G++LA D+ +P +P + S DGYAV
Sbjct: 7 LMSLDTALNEMLS---RVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAV 63
Query: 72 ----VASDGPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
+AS P PV +S AG G +GT + TG P+P+G +AVV E T+++
Sbjct: 64 RLADIASGQP--LPVAGKSFAGQPYHGEW-PAGTCIRIMTGAPVPEGCEAVVMQEQTEQM 120
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
++ V+ + G +IR G DI A++ +G R+ +E+ ++A+ GI V V
Sbjct: 121 DNG------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPV 174
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+R D L
Sbjct: 175 IRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRADPHAL 233
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F +++
Sbjct: 234 RAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLS-- 290
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPLKTD 366
N GLPGNPVS + F+ + P + LSG L R R LK
Sbjct: 291 -------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKT 342
Query: 367 RVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 415
R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 343 PGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|1UZ5|A Chain A, The Crystal Structure Of Molybdopterin Biosynthesis Moea
Protein From Pyrococcus Horikosii
Length = 402
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 177/339 (52%), Gaps = 26/339 (7%)
Query: 15 KMISAEEALQKVLSVAQRLPPVTVPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAVVAS 74
K++ E+AL+ V S VP+ + LG++ AEDI +P +PP+ + DGYAV A
Sbjct: 5 KVVPLEKALEVVQSFKISPGIEEVPIEKGLGRIAAEDIYSPIDVPPFDRATVDGYAVRAE 64
Query: 75 D-------GPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTDEV 127
D P VI AG + + G AY++TG +P ADAV+Q ED + V
Sbjct: 65 DTFMASEASPVRLKVIGSVHAGEEP-KFKLGKGEAAYISTGAMLPGNADAVIQFEDVERV 123
Query: 128 NHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMVKV 187
N + I G+ + G DIEK +++K GER+G + LL+ GI VKV
Sbjct: 124 NG------EILIYKPAYPGLGVMKKGIDIEKGRLLVKKGERLGFKQTALLSAVGINKVKV 177
Query: 188 YRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEEL 247
+R P +AV+STG+E+V P + L GQI D N L A + + I +G+ RDD+E L
Sbjct: 178 FRKPKVAVISTGNEIVPPGNE-LKPGQIYDINGRALCDAINELGGEGIFMGVARDDKESL 236
Query: 248 EKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIK 307
+ ++ A + G D+++ SGG S G KD ++++ G + + + ++PGKP I K
Sbjct: 237 KALIEKAVNVG-DVVVISGGASGGTKDLTASVIEELGEVKVHGIAIQPGKPTIIGVIKGK 295
Query: 308 PTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSG 346
P FGLPG P SC+ F L +VP + G
Sbjct: 296 PV----------FGLPGYPTSCLTNFTLLVVPLLLRALG 324
>pdb|1JLJ|A Chain A, 1.6 Angstrom Crystal Structure Of The Human Neuroreceptor
Anchoring And Molybdenum Cofactor Biosynthesis Protein
Gephyrin
pdb|1JLJ|B Chain B, 1.6 Angstrom Crystal Structure Of The Human Neuroreceptor
Anchoring And Molybdenum Cofactor Biosynthesis Protein
Gephyrin
pdb|1JLJ|C Chain C, 1.6 Angstrom Crystal Structure Of The Human Neuroreceptor
Anchoring And Molybdenum Cofactor Biosynthesis Protein
Gephyrin
Length = 189
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Query: 471 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 530
+ V +LTVSD+ DRSG +V S L G + A +VPD++ +IKE L
Sbjct: 14 QIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPS--LLGGTISAYKIVPDEIEEIKETLI 71
Query: 531 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 590
W D +++LILT GGTGF PRDVTPEATKE+IERE PG+ M+ SL VTP MLSR
Sbjct: 72 DWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRP 131
Query: 591 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIK 629
GIRG TLIIN+PG+ EC + +LPAL HA+ ++
Sbjct: 132 VCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLR 170
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 24/118 (20%)
Query: 239 IVRDDEEELEKTL-DNAFSAGIDILLTSGGVSMGDKDF----VKPLLQKKGTIYFNKVCM 293
IV D+ EE+++TL D ++++LT+GG +D K +++++
Sbjct: 58 IVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREA--------- 108
Query: 294 KPGKPLT--FAEINIKPTDDV------MVNKILAFGLPGNPVSCIVCFHLYIVPAIRH 343
PG L +N+ P + + K L LPG+ CF +I+PA+ H
Sbjct: 109 -PGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQ-FILPALPH 164
>pdb|1IHC|A Chain A, X-Ray Structure Of Gephyrin N-Terminal Domain
Length = 188
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Query: 471 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 530
+ V +LTVSD+ DRSG +V S L G + A +VPD++ +IKE L
Sbjct: 14 QIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPS--LLGGTISAYKIVPDEIEEIKETLI 71
Query: 531 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 590
W D +++LILT GGTGF PRDVTPEATKE+IERE PG+ M+ SL VTP MLSR
Sbjct: 72 DWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRP 131
Query: 591 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIK 629
GIRG TLIIN+PG+ EC + +LPAL HA+ ++
Sbjct: 132 VCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLR 170
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 24/118 (20%)
Query: 239 IVRDDEEELEKTL-DNAFSAGIDILLTSGGVSMGDKDF----VKPLLQKKGTIYFNKVCM 293
IV D+ EE+++TL D ++++LT+GG +D K +++++
Sbjct: 58 IVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREA--------- 108
Query: 294 KPGKPLT--FAEINIKPTDDV------MVNKILAFGLPGNPVSCIVCFHLYIVPAIRH 343
PG L +N+ P + + K L LPG+ CF +I+PA+ H
Sbjct: 109 -PGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQ-FILPALPH 164
>pdb|1XI8|A Chain A, Molybdenum Cofactor Biosynthesis Protein From Pyrococcus
Furiosus Pfu-1657500-001
pdb|1XI8|B Chain B, Molybdenum Cofactor Biosynthesis Protein From Pyrococcus
Furiosus Pfu-1657500-001
Length = 403
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 201/416 (48%), Gaps = 47/416 (11%)
Query: 11 GSQEKMIS-AEEALQKVLSVAQRLPPV-TVPLYEALGKVLAEDIRAPDPLPPYPASVKDG 68
GS+ K ++ EEAL VL+ + + V VPL +ALG+VLAEDI A LPP+ + DG
Sbjct: 8 GSEFKRLTPYEEALSIVLNDLKEIEEVEYVPLKDALGRVLAEDIVASYDLPPFDRAAVDG 67
Query: 69 YAVVASD-------GPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQV 121
YAV A D P E VI E G + ++ +G V TGG IP GA+AV+
Sbjct: 68 YAVRAEDTFEAREYSPVELEVIEEVPIGENPNKEVI-AGKAIKVLTGGKIPRGANAVIMQ 126
Query: 122 EDTDEVNHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAG 181
E E ++ +L G +I G D++K I LK G + ++ LL G
Sbjct: 127 E------MVKREGSKIYVLRPVAPGQNISFAGEDVKKGDIALKKGTILRPQDLALLKALG 180
Query: 182 IMMVKVYRTPTIAVLSTGDELV-EPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIV 240
I V V P + ++ TG ELV EP+ + ++G+I D+N ML A + + I G+V
Sbjct: 181 IRKVPVKVKPKVGIIITGSELVQEPSLEEFEKGKIVDTNSIMLSALVERYFGEPILYGVV 240
Query: 241 RDDEEELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLT 300
D+E+ + L+ A D++L +GG + GD D+ + + F+ ++PG+P+
Sbjct: 241 PDNEDLIRSALEKA-KRECDLVLITGGSAFGDMDYAHKFV----NLLFHGTTIRPGRPIG 295
Query: 301 FAEINIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHLLRVPARIC 360
+ E F + G PV+ FHL++ A+ L G A + ++V A +
Sbjct: 296 YGE--------------RVFVMSGYPVAVFTQFHLFVKHALAKLVG-AKDYEVKVRAVLE 340
Query: 361 QPLKTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLELP 416
+ + R EF R + R DG A+ + S + S+ +NA L +P
Sbjct: 341 DDVPSQLGRYEFVRVMYR----DGK------AKVIKKKGSGIISSLVQSNAYLVVP 386
>pdb|2IS8|A Chain A, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
pdb|2IS8|B Chain B, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
pdb|2IS8|C Chain C, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
pdb|3MCH|A Chain A, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
pdb|3MCH|B Chain B, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
pdb|3MCH|C Chain C, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
Length = 164
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 5/159 (3%)
Query: 472 FSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRR 531
F V ILTVSD G D + V+ G +V A ++VPD+ IK+VLR
Sbjct: 2 FRVGILTVSDKGFRGERQDTTHLAIREVLAG-----GPFEVAAYELVPDEPPMIKKVLRL 56
Query: 532 WSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSA 591
W+D + +DLILT GGTG PRD TPEAT+EL++RE PGL +M L+ TP A LSR
Sbjct: 57 WADREGLDLILTNGGTGLAPRDRTPEATRELLDREVPGLAELMRLVGLRKTPMAALSRGV 116
Query: 592 AGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKG 630
AG+RG TLI+N+PG+P E +EA+LP L HAL + G
Sbjct: 117 AGVRGRTLILNLPGSPKGARESLEAVLPVLPHALSLVTG 155
>pdb|1WU2|A Chain A, Crystal Structure Of Molybdopterin Biosynthesis Moea
Protein From Pyrococcus Horikoshii Ot3
pdb|1WU2|B Chain B, Crystal Structure Of Molybdopterin Biosynthesis Moea
Protein From Pyrococcus Horikoshii Ot3
Length = 396
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 193/412 (46%), Gaps = 46/412 (11%)
Query: 14 EKMISAEEALQKVLSVAQRLPPV-TVPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAVV 72
+K++ EAL+ +L + VPL EA+G+VLAEDI +PP+ + DGYA+
Sbjct: 5 KKLVPYREALKLLLDDINEIEDTEKVPLREAVGRVLAEDIVTEFDIPPFDRAAVDGYAIR 64
Query: 73 ASD-------GPGEYPVITESRAGNDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDTD 125
A D P E VI E AGN VT+G V TG IP GA+AV+ E
Sbjct: 65 AEDTFQAREYNPIELTVIEEVPAGNVA-KEEVTTGKAIKVLTGTRIPKGANAVIXQEXVK 123
Query: 126 EVNHTAAESKRVKILVQTNKGVDIRPVGYDIEKDAIILKSGERIGASEIGLLATAGIMMV 185
E ++ +L G +I G D++K ++L+ G + ++ L GI V
Sbjct: 124 R------EGDKIYVLRPVAPGQNIAFTGEDVKKGEVVLRKGTILRPQDVAXLKALGIKKV 177
Query: 186 KVYRTPTIAVLSTGDELV-EPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 244
V P + ++ TG EL+ EP+ + G+I ++N L + + I G++ DDE
Sbjct: 178 PVKVKPKVGIIITGSELIEEPSEEGFKEGKIVETNSIXLQGLVEKFFGEPILYGVLPDDE 237
Query: 245 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 304
+++TL+ A + DI+L +GG + GDKD+ + + F+ +KPG+P + E
Sbjct: 238 SIIKETLEKAKNE-CDIVLITGGSAFGDKDYAHKFV----NLLFHGTTIKPGRPFGYGE- 291
Query: 305 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHLLRVPARICQPLK 364
F G PVS F+L++ A+ G N + ++V A + +
Sbjct: 292 -------------KVFIXSGYPVSVFAQFNLFVKHALAKXVGAQN-YEVKVKAILQDDIP 337
Query: 365 TDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLELP 416
+ R EF ++ +G +A + S L S+ ++NA LE+P
Sbjct: 338 SQLGRYEF----IKIYYENG------IARVIKKKGSGILSSLLASNAYLEIP 379
>pdb|2PBQ|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|2PBQ|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|2PBQ|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|2QQ1|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|2QQ1|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|2QQ1|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|2QQ1|D Chain D, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|2QQ1|E Chain E, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|2QQ1|F Chain F, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCI|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|3MCI|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|3MCI|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|3MCJ|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCJ|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCJ|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCJ|D Chain D, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCJ|E Chain E, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCJ|F Chain F, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
Length = 178
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 97/167 (58%), Gaps = 3/167 (1%)
Query: 474 VAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWS 533
+ ++T+SD + G D SG ++++ + + V V+PD+ I++ L +
Sbjct: 8 IGVVTISDRASKGIYEDISGK---AIIDYLKDVIITPFEVEYRVIPDERDLIEKTLIELA 64
Query: 534 DIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSAAG 593
D LILT GGTG PRDVTPEAT+ + E+ PG +M Q SLK P A+LSR AG
Sbjct: 65 DEKGCSLILTTGGTGPAPRDVTPEATEAVCEKMLPGFGELMRQVSLKQVPTAILSRQTAG 124
Query: 594 IRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPRHV 640
IRGS LI+N+PG P ++ C++A++PA+ + + I G + P V
Sbjct: 125 IRGSCLIVNLPGKPQSIKVCLDAVMPAIPYCIDLIGGAYIDTDPNKV 171
>pdb|3K6A|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|3K6A|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|3K6A|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|3K6A|D Chain D, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|3K6A|E Chain E, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|3K6A|F Chain F, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
Length = 180
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Query: 474 VAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWS 533
+ I+TVSD ++G D SG +++++ ++ L V+PD+ I+ L + +
Sbjct: 9 IGIVTVSDRASAGIYEDISGK---AIIDTLNDYLTSEWEPIYQVIPDEQDVIETTLIKXA 65
Query: 534 DIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSAAG 593
D LI+T GGTG RDVTPEAT+ + +R PG + ESLK P A+LSR AG
Sbjct: 66 DEQDCCLIVTTGGTGPAKRDVTPEATEAVCDRXXPGFGELXRAESLKFVPTAILSRQTAG 125
Query: 594 IRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKG 630
+RG +LI+N+PG P ++ EC++A+ PA+ + + +G
Sbjct: 126 LRGDSLIVNLPGKPKSIRECLDAVFPAIPYCIDLXEG 162
>pdb|2F7W|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|2F7W|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|2F7W|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|2F7Y|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|2F7Y|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|2F7Y|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
Length = 177
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Query: 474 VAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWS 533
+ I+TVSD ++G D SG +++++ ++ L V+PD+ I+ L + +
Sbjct: 6 IGIVTVSDRASAGIYEDISGK---AIIDTLNDYLTSEWEPIYQVIPDEQDVIETTLIKXA 62
Query: 534 DIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSAAG 593
D LI+T GGTG RDVTPEAT+ + +R PG + ESLK P A+LSR AG
Sbjct: 63 DEQDCCLIVTTGGTGPAKRDVTPEATEAVCDRXXPGFGELXRAESLKFVPTAILSRQTAG 122
Query: 594 IRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKG 630
+RG +LI+N+PG P ++ EC++A+ PA+ + + +G
Sbjct: 123 LRGDSLIVNLPGKPKSIRECLDAVFPAIPYCIDLXEG 159
>pdb|3OI9|A Chain A, Crystal Structure Of Molybdenum Cofactor Synthesis Domain
From Mycobacterium Avium
Length = 164
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 470 TEFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVL 529
T S ++ S +SG DR GP + +VVA D + E L
Sbjct: 6 TTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVA------DGSPVGEAL 59
Query: 530 RRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSR 589
R+ D D +D+ILT GGTG P D TP+ T +++ PGL + Q L P ++LSR
Sbjct: 60 RKAID-DDVDVILTSGGTGIAPTDSTPDQTVAVVDYLIPGLAEAIRQSGLPKVPTSVLSR 118
Query: 590 SAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPR 638
G+ G TLI+N+PG+P V + + L L HAL Q+ G + HPR
Sbjct: 119 GVCGVAGQTLIVNLPGSPGGVRDGLGVLAGVLDHALDQLAG---KDHPR 164
>pdb|3PZY|A Chain A, Crystal Structure Of Molybdopterin Biosynthesis Mog
Protein From Mycobacterium Paratuberculosis
Length = 164
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 470 TEFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVL 529
T S ++ S +SG DR GP + +VVA D + E L
Sbjct: 6 TTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVA------DGSPVGEAL 59
Query: 530 RRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSR 589
R+ D D +D+ILT GGTG P D TP+ T +++ PGL + + L P ++LSR
Sbjct: 60 RKAID-DDVDVILTSGGTGIAPTDSTPDQTVAVVDYLIPGLAEAIRRSGLPKVPTSVLSR 118
Query: 590 SAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPR 638
G+ G TLI+N+PG+P V + + L L HAL Q+ G + HPR
Sbjct: 119 GVCGVAGQTLIVNLPGSPGGVRDGLGVLAGVLDHALDQLAG---KDHPR 164
>pdb|1DI6|A Chain A, 1.45 A Crystal Structure Of The Molybdenumm Cofactor
Biosynthesis Protein Moga From Escherichia Coli
pdb|1DI7|A Chain A, 1.60 Angstrom Crystal Structure Of The Molybdenum Cofactor
Biosynthesis Protein Moga From Escherichia Coli
Length = 195
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 472 FSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRR 531
+ ++++SD +SG D+ P + S+ L + T ++PD+ I++ L
Sbjct: 4 LRIGLVSISDRASSGVYQDKGIPALEEWLTSA---LTTPFELETRLIPDEQAIIEQTLCE 60
Query: 532 WSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSA 591
D L+LT GGTG RDVTP+AT + +RE PG M Q SL P A+LSR
Sbjct: 61 LVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSRQV 120
Query: 592 AGIRGSTLIINMPGNPNAVAECMEAL 617
IR LI+N+PG P ++ E +E +
Sbjct: 121 GVIRKQALILNLPGQPKSIKETLEGV 146
>pdb|2G4R|A Chain A, Anomalous Substructure Of Moga
pdb|2G4R|B Chain B, Anomalous Substructure Of Moga
pdb|2G4R|C Chain C, Anomalous Substructure Of Moga
Length = 160
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 538 MDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSAAGIRGS 597
+D+I+T GGTG +P D TPE T +++ PGL + + L P ++LSR G+ G
Sbjct: 63 VDVIITSGGTGISPTDTTPEHTVAVLDYVIPGLADAIRRSGLPKVPTSVLSRGVCGVAGR 122
Query: 598 TLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPR 638
TLIIN+PG+P V + + L L HAL+QI G HPR
Sbjct: 123 TLIINLPGSPGGVRDGLGVLADVLDHALEQIAGG---DHPR 160
>pdb|3RFQ|A Chain A, Crystal Structure Of Pterin-4-Alpha-Carbinolamine
Dehydratase Moab2 From Mycobacterium Marinum
pdb|3RFQ|B Chain B, Crystal Structure Of Pterin-4-Alpha-Carbinolamine
Dehydratase Moab2 From Mycobacterium Marinum
pdb|3RFQ|C Chain C, Crystal Structure Of Pterin-4-Alpha-Carbinolamine
Dehydratase Moab2 From Mycobacterium Marinum
Length = 185
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 490 DRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGF 549
D SGP ++ + + G V D V I+ L + I +DL++++GGTG
Sbjct: 48 DHSGPLVTELLTEAGFVVDGVVAVEADEV-----DIRNALN-TAVIGGVDLVVSVGGTGV 101
Query: 550 TPRDVTPEATKELIERETPGLLYVMMQESLKVTPF-AMLSRSAAGIRGSTLIINMPGNPN 608
TPRDVTPE+T+E+++RE G+ + L A LSR AG+ GSTL++N+ G+
Sbjct: 102 TPRDVTPESTREILDREILGIAEAIRASGLSAGIIDAGLSRGLAGVSGSTLVVNLAGSRY 161
Query: 609 AVAECMEALLPALKHALKQIK 629
AV + M L P H + Q+
Sbjct: 162 AVRDGMATLNPLAAHIIGQLS 182
>pdb|3IWT|A Chain A, Structure Of Hypothetical Molybdenum Cofactor Biosynthesis
Protein B From Sulfolobus Tokodaii
pdb|3IWT|B Chain B, Structure Of Hypothetical Molybdenum Cofactor Biosynthesis
Protein B From Sulfolobus Tokodaii
pdb|3IWT|C Chain C, Structure Of Hypothetical Molybdenum Cofactor Biosynthesis
Protein B From Sulfolobus Tokodaii
Length = 178
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 79/129 (61%), Gaps = 10/129 (7%)
Query: 508 GGAKVVATDVVPDDVGKIKEVLRRWSD---IDKMDLILTLGGTGFTPRDVTPEATKELIE 564
G K++ +VPDD KIK +L+ ++D ID++D+I++ GGTG++P D+T E ++L +
Sbjct: 52 NGHKIIGYSLVPDD--KIK-ILKAFTDALSIDEVDVIISTGGTGYSPTDITVETIRKLFD 108
Query: 565 RETPGLLYVMMQESL---KVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECM-EALLPA 620
RE G V S +V A L++++AGI G ++ +PG+P+AV + E +LP
Sbjct: 109 REIEGFSDVFRLVSFNDPEVKAAAYLTKASAGIIGKKIVYLLPGSPDAVKLALKELILPE 168
Query: 621 LKHALKQIK 629
+ H + ++
Sbjct: 169 VGHLVYLVR 177
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 208 QCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEELEKTLDNAFSAG-IDILLTSG 266
+ L + I D + ++ ++ K+I +V DD+ ++ K +A S +D+++++G
Sbjct: 30 KLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTG 89
Query: 267 GVSMGDKDF----VKPLLQKK--------GTIYFNKVCMKPGKPLTFAEINIKPTDDVMV 314
G D ++ L ++ + FN +K LT A I +
Sbjct: 90 GTGYSPTDITVETIRKLFDREIEGFSDVFRLVSFNDPEVKAAAYLTKASAGI-------I 142
Query: 315 NKILAFGLPGNPVSCIVCFHLYIVPAIRHL 344
K + + LPG+P + + I+P + HL
Sbjct: 143 GKKIVYLLPGSPDAVKLALKELILPEVGHL 172
>pdb|1Y5E|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein B
pdb|1Y5E|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein B
pdb|1Y5E|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein B
Length = 169
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 471 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 530
E I+T+SDT D+SG ++ K G KV + ++V DD I++ +
Sbjct: 13 EVRCKIVTISDTRTEET--DKSGQLLHELL-----KEAGHKVTSYEIVKDDKESIQQAVL 65
Query: 531 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGL--LYVMMQESLKVTPFAMLS 588
+ +D++LT GGTG T RDVT EA L+++E G L+ + + A LS
Sbjct: 66 AGYHKEDVDVVLTNGGTGITKRDVTIEAVSALLDKEIVGFGELFRXISYLEDIGSSAXLS 125
Query: 589 RSAAGIRGSTLIINMPGNPNAVAECMEAL-LPALKH 623
R+ G G ++ + PG+ AV L LP L H
Sbjct: 126 RAIGGTIGRKVVFSXPGSSGAVRLAXNKLILPELGH 161
>pdb|1MKZ|A Chain A, Crystal Structure Of Moab Protein At 1.6 A Resolution.
pdb|1MKZ|B Chain B, Crystal Structure Of Moab Protein At 1.6 A Resolution
Length = 172
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 470 TEF---SVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIK 526
TEF +AILTVS+ G D SG + +S+ E G VV +V ++ I+
Sbjct: 6 TEFIPTRIAILTVSNR--RGEEDDTSGH---YLRDSAQE--AGHHVVDKAIVKENRYAIR 58
Query: 527 EVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESL-KVTPFA 585
+ W D + ++L GGTG T D PEA L +RE G V S ++
Sbjct: 59 AQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGFGEVFRXLSFEEIGTST 118
Query: 586 MLSRSAAGIRGSTLIINMPGNPNAVAECMEALL 618
+ SR+ AG+ TLI+ PG+ A E ++
Sbjct: 119 LQSRAVAGVANKTLILAXPGSTKACRTAWENII 151
>pdb|1R2K|B Chain B, Crystal Structure Of Moab From Escherichia Coli
pdb|1R2K|A Chain A, Crystal Structure Of Moab From Escherichia Coli
Length = 169
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 470 TEF---SVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIK 526
TEF +AILTVS+ G D SG + +S+ E G VV +V ++ I+
Sbjct: 5 TEFIPTRIAILTVSNR--RGEEDDTSGH---YLRDSAQE--AGHHVVDKAIVKENRYAIR 57
Query: 527 EVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESL-KVTPFA 585
+ W D + ++L GGTG T D PEA L +RE G V S ++
Sbjct: 58 AQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGFGEVFRXLSFEEIGTST 117
Query: 586 MLSRSAAGIRGSTLIINMPGNPNAVAECMEALL 618
+ SR+ AG+ TLI PG+ A E ++
Sbjct: 118 LQSRAVAGVANKTLIFAXPGSTKACRTAWENII 150
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 212 RGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEELEKTLDNAFSAGIDI---LLTSG-G 267
RG+ D++ L +A + ++D IV+++ + + +A+ A D+ L+T G G
Sbjct: 21 RGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQV-SAWIASDDVQVVLITGGTG 79
Query: 268 VSMGDK--DFVKPLLQKK----GTIYFNKVCMKPGKPLTFAEINIKPTDDVMV----NKI 317
++ GD+ + + PL ++ G ++ + L+F EI V NK
Sbjct: 80 LTEGDQAPEALLPLFDREVEGFGEVF---------RXLSFEEIGTSTLQSRAVAGVANKT 130
Query: 318 LAFGLPGNPVSCIVCFHLYIVPAIRHLSGWAN--PHL 352
L F PG+ +C + I P + + N PHL
Sbjct: 131 LIFAXPGSTKACRTAWENIIAPQLDARTRPCNFHPHL 167
>pdb|3TCR|A Chain A, Crystal Structure Of A Molybdopterin Biosynthesis Protein
From Mycobacterium Abscessus
pdb|3TCR|B Chain B, Crystal Structure Of A Molybdopterin Biosynthesis Protein
From Mycobacterium Abscessus
Length = 199
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 520 DDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESL 579
+D+ +I+ + + I +DL++T+GGTG TPRDV PEAT+ L++RE G+ + L
Sbjct: 86 NDLSEIQNAVN-TAVIGGVDLVVTVGGTGVTPRDVAPEATQPLLDRELLGIAEAIRSSGL 144
Query: 580 KV-TPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIK 629
A LSR AGI GSTL++N+ G+ AV + M L P ++Q+
Sbjct: 145 AAGVTEAGLSRGVAGISGSTLVVNIAGSRAAVRDGMATLTPMAIQIIEQLS 195
>pdb|2G2C|A Chain A, Putative Molybdenum Cofactor Biosynthesis Protein From
Corynebacterium Diphtheriae
Length = 167
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 475 AILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWSD 534
AI+ VSD +++G +++ P + + S + ++++ VVP+ + E +
Sbjct: 9 AIIVVSDRISTGTRENKALP-LLQRLXSDELQDYSYELISEVVVPEGYDTVVEAIATALK 67
Query: 535 IDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSAAGI 594
I+T GGTG ++ TPEAT I GL ++ T A LSR G+
Sbjct: 68 -QGARFIITAGGTGIRAKNQTPEATASFIHTRCEGLEQQILIHGSTHTHLAGLSRGIVGV 126
Query: 595 RG----STLIINMPGNPNAVAECMEALLPAL 621
G + LI+N P + + + + P +
Sbjct: 127 TGRDDHAALIVNAPSSSGGITDTWAVISPVI 157
>pdb|1QVR|A Chain A, Crystal Structure Analysis Of Clpb
pdb|1QVR|B Chain B, Crystal Structure Analysis Of Clpb
pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb
Length = 854
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 494 PRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWSDI 535
P+ + V + SEKL GA+ V +V +D+ E++ RW+ I
Sbjct: 498 PKLEAEVEALSEKLRGARFVRLEVTEEDIA---EIVSRWTGI 536
>pdb|4HSE|A Chain A, Crystal Structure Of Clpb Nbd1 In Complex With Guanidinium
Chloride And Adp
Length = 397
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 494 PRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWS 533
P+ + V + SEKL GA+ V +V +D+ E++ RW+
Sbjct: 361 PKLEAEVEALSEKLRGARFVRLEVTEEDIA---EIVSRWT 397
>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine
Dehydrogenase (Y137f) From Hyperthermophilic Archaeon
Thermoplasma Volcanium
pdb|3A9W|B Chain B, Crystal Structure Of L-Threonine Bound L-Threonine
Dehydrogenase (Y137f) From Hyperthermophilic Archaeon
Thermoplasma Volcanium
pdb|3AJR|A Chain A, Crystal Structure Of L-3-Hydroxynorvaline Bound
L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic
Archaeon Thermoplasma Volcanium
pdb|3AJR|B Chain B, Crystal Structure Of L-3-Hydroxynorvaline Bound
L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic
Archaeon Thermoplasma Volcanium
Length = 317
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 492 SGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWSDIDKMD 539
SG +V +EK G V+A+D+V D G IK + S+ D++D
Sbjct: 8 SGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEID 55
>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From
Hyperthermophilic Archaeon Thermoplasma Volcanium
pdb|3A1N|B Chain B, Crystal Structure Of L-Threonine Dehydrogenase From
Hyperthermophilic Archaeon Thermoplasma Volcanium
pdb|3A4V|A Chain A, Crystal Structure Of Pyruvate Bound L-Threonine
Dehydrogenase From Hyperthermophilic Archaeon
Thermoplasma Volcanium
pdb|3A4V|B Chain B, Crystal Structure Of Pyruvate Bound L-Threonine
Dehydrogenase From Hyperthermophilic Archaeon
Thermoplasma Volcanium
Length = 317
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 492 SGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWSDIDKMD 539
SG +V +EK G V+A+D+V D G IK + S+ D++D
Sbjct: 8 SGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEID 55
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,553,276
Number of Sequences: 62578
Number of extensions: 891590
Number of successful extensions: 2586
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2424
Number of HSP's gapped (non-prelim): 69
length of query: 671
length of database: 14,973,337
effective HSP length: 105
effective length of query: 566
effective length of database: 8,402,647
effective search space: 4755898202
effective search space used: 4755898202
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 55 (25.8 bits)