Query 005902
Match_columns 671
No_of_seqs 329 out of 619
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 10:34:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005902.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005902hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fo5_A Thioesterase, adipose a 100.0 2.6E-38 8.9E-43 325.8 15.1 208 203-432 37-248 (258)
2 3p0l_A Steroidogenic acute reg 100.0 3.8E-35 1.3E-39 293.1 21.3 186 231-432 29-216 (221)
3 2r55_A STAR-related lipid tran 100.0 3E-34 1E-38 287.9 24.4 187 231-431 41-229 (231)
4 1jss_A Stard4, cholesterol-reg 100.0 2.2E-34 7.5E-39 288.7 20.9 182 232-430 42-223 (224)
5 2pso_A STAR-related lipid tran 100.0 7.2E-34 2.5E-38 288.6 22.2 184 231-435 48-232 (237)
6 1em2_A MLN64 protein; beta bar 100.0 5.2E-34 1.8E-38 286.0 20.6 186 231-432 40-227 (229)
7 3qsz_A STAR-related lipid tran 100.0 6.2E-30 2.1E-34 248.5 22.6 179 232-431 2-180 (189)
8 2e3n_A Lipid-transfer protein 100.0 2.9E-29 9.9E-34 255.7 20.1 194 228-431 42-247 (255)
9 1ln1_A PC-TP, phosphatidylchol 100.0 4.8E-29 1.6E-33 246.1 21.0 180 231-431 26-210 (214)
10 2w2x_D 1-phosphatidylinositol- 99.5 5.3E-14 1.8E-18 128.5 7.1 107 44-155 10-120 (124)
11 1v89_A Hypothetical protein KI 99.2 2.8E-10 9.5E-15 100.5 13.1 103 43-154 5-112 (118)
12 1v88_A Oxysterol binding prote 99.2 1.5E-10 5E-15 107.3 11.7 99 43-154 5-124 (130)
13 2dkp_A Pleckstrin homology dom 99.2 2.9E-10 9.9E-15 102.3 13.1 101 44-154 19-119 (128)
14 2d9x_A Oxysterol binding prote 99.2 1.9E-10 6.3E-15 103.5 11.5 101 44-158 6-108 (120)
15 1u5d_A SKAP55, SRC kinase-asso 99.1 2.2E-10 7.6E-15 99.4 11.2 102 45-154 2-105 (108)
16 2rsg_A Collagen type IV alpha- 99.1 1E-10 3.5E-15 100.5 8.6 93 46-153 1-93 (94)
17 2yry_A Pleckstrin homology dom 99.1 6.4E-10 2.2E-14 99.2 14.1 101 44-154 20-120 (122)
18 1unq_A RAC-alpha serine/threon 99.1 1.7E-10 5.9E-15 103.9 10.1 104 44-157 6-113 (125)
19 4a6h_A Phosphatidylinositol 4, 99.1 3.9E-10 1.3E-14 103.2 12.0 101 46-153 6-117 (120)
20 2da0_A 130-kDa phosphatidylino 99.1 3.9E-10 1.3E-14 100.6 11.6 96 44-156 8-103 (114)
21 1wgq_A FYVE, rhogef and PH dom 99.1 7.1E-10 2.4E-14 97.5 12.6 101 41-154 3-103 (109)
22 2dhk_A TBC1 domain family memb 99.1 7.7E-10 2.6E-14 99.5 12.9 98 44-155 6-105 (119)
23 2dn6_A KIAA0640 protein; PH do 99.1 6.7E-10 2.3E-14 97.9 12.2 101 43-156 5-105 (115)
24 1eaz_A Tandem PH domain contai 99.1 4.2E-10 1.4E-14 100.7 10.7 102 43-155 11-112 (125)
25 1wi1_A Calcium-dependent activ 99.1 4.9E-10 1.7E-14 103.7 11.1 99 45-155 7-111 (126)
26 1upq_A PEPP1; PH domain, phosp 99.1 9.1E-10 3.1E-14 98.4 11.7 100 45-154 10-109 (123)
27 1fgy_A GRP1; PH domain, signal 99.1 1E-09 3.6E-14 98.2 12.1 99 44-154 3-120 (127)
28 1u5f_A SRC-associated adaptor 99.1 7.9E-10 2.7E-14 102.9 11.6 109 38-154 9-119 (148)
29 2cod_A Centaurin-delta 1; ARF 99.1 1.1E-09 3.8E-14 97.2 11.9 94 44-154 6-99 (115)
30 1v5u_A SBF1, SET binding facto 99.1 3.3E-10 1.1E-14 100.2 8.3 102 42-154 4-111 (117)
31 2d9y_A Pleckstrin homology dom 99.0 1E-09 3.6E-14 97.0 11.4 101 44-154 9-109 (117)
32 1fao_A Dual adaptor of phospho 99.0 7.8E-10 2.7E-14 99.6 10.8 105 42-160 14-118 (126)
33 2y7b_A Actin-binding protein a 99.0 8.7E-10 3E-14 100.1 10.1 108 44-155 3-129 (134)
34 3rcp_A Pleckstrin homology dom 99.0 9.9E-10 3.4E-14 95.5 9.4 93 48-154 1-93 (103)
35 2i5f_A Pleckstrin; PH domain, 99.0 2.3E-09 7.7E-14 93.6 11.5 100 44-153 5-108 (109)
36 1pls_A Pleckstrin homology dom 99.0 2.5E-09 8.5E-14 94.5 11.7 100 44-155 3-102 (113)
37 3aj4_A Pleckstrin homology dom 99.0 5.7E-10 1.9E-14 98.5 7.2 104 45-154 4-111 (112)
38 2cof_A Protein KIAA1914; PH do 99.0 9.5E-10 3.3E-14 96.8 8.5 96 44-154 6-101 (107)
39 1wg7_A Dedicator of cytokinesi 99.0 1.7E-09 5.8E-14 100.5 10.6 100 44-154 16-124 (150)
40 2coc_A FYVE, rhogef and PH dom 99.0 2.2E-09 7.6E-14 97.1 10.3 99 41-154 3-106 (112)
41 1x05_A Pleckstrin; PH domain, 98.9 4.6E-09 1.6E-13 94.9 11.7 102 43-154 15-120 (129)
42 1x1f_A Signal-transducing adap 98.9 8.6E-09 3E-13 97.8 13.7 96 45-154 17-113 (149)
43 1btn_A Beta-spectrin; signal t 98.9 9.1E-10 3.1E-14 95.7 6.4 99 48-152 1-106 (106)
44 1u5e_A SRC-associated adaptor 98.9 4.3E-09 1.5E-13 104.9 12.0 109 38-154 98-208 (211)
45 1dyn_A Dynamin; signal transdu 98.9 6.1E-09 2.1E-13 96.0 11.1 99 46-152 12-115 (125)
46 2d9v_A Pleckstrin homology dom 98.9 9.7E-09 3.3E-13 93.9 12.1 102 44-154 6-114 (130)
47 1v5p_A Pleckstrin homology dom 98.9 6.1E-09 2.1E-13 95.8 10.0 101 46-154 15-120 (126)
48 2j59_M RHO-GTPase activating p 98.9 4.9E-09 1.7E-13 99.5 9.3 101 45-154 2-111 (168)
49 1x1g_A Pleckstrin 2; PH domain 98.9 1.1E-08 3.9E-13 92.1 10.6 102 43-154 15-124 (129)
50 1btk_A Bruton'S tyrosine kinas 98.8 1.1E-08 3.8E-13 98.5 10.2 106 45-154 2-132 (169)
51 2p0d_A RHO GTPase-activating p 98.8 5.7E-08 1.9E-12 89.1 12.7 105 44-155 10-125 (129)
52 2fjl_A 1-phosphatidylinositol- 98.8 3.2E-08 1.1E-12 94.0 11.0 103 47-154 2-148 (150)
53 3tfm_A Myosin X; split PH doma 98.8 2.8E-08 9.6E-13 99.9 11.1 100 42-154 54-155 (228)
54 3cxb_B Pleckstrin homology dom 98.8 2.9E-08 9.8E-13 88.8 9.9 95 48-154 2-101 (112)
55 1wjm_A Beta-spectrin III; PH d 98.8 2.5E-08 8.6E-13 89.7 9.6 105 44-154 6-117 (123)
56 2lul_A Tyrosine-protein kinase 98.7 3.6E-08 1.2E-12 94.2 10.2 105 44-154 13-121 (164)
57 2rlo_A Centaurin-gamma 1; spli 98.7 2.3E-08 7.9E-13 90.9 7.8 108 45-155 3-125 (128)
58 2dtc_A RAL guanine nucleotide 98.7 1.1E-07 3.8E-12 88.0 10.8 101 47-154 2-112 (126)
59 1dro_A Beta-spectrin; cytoskel 98.7 4E-08 1.4E-12 88.6 7.5 105 44-154 6-119 (122)
60 3tca_A Amyloid beta A4 precurs 98.6 7.2E-08 2.5E-12 98.6 10.2 107 44-154 166-276 (291)
61 3a8p_A T-lymphoma invasion and 98.6 1.2E-07 4.2E-12 97.6 11.7 109 41-156 6-126 (263)
62 2r09_A Cytohesin-3; autoinhibi 98.6 2.4E-07 8.1E-12 98.9 11.8 98 45-154 212-328 (347)
63 3pp2_A RHO GTPase-activating p 98.6 3.7E-07 1.3E-11 83.1 11.3 104 43-154 5-123 (124)
64 4h8s_A DCC-interacting protein 98.5 3.1E-07 1.1E-11 99.4 11.4 99 44-155 299-399 (407)
65 1qqg_A IRS-1, insulin receptor 98.5 1.2E-07 4.2E-12 97.7 5.9 97 44-154 8-112 (264)
66 3lju_X ARF-GAP with dual PH do 98.5 7.2E-07 2.5E-11 96.5 12.1 102 44-154 267-372 (386)
67 2q13_A DCC-interacting protein 98.4 6.3E-07 2.2E-11 96.3 10.0 99 44-154 276-375 (385)
68 2rov_A RHO-associated protein 98.2 1.2E-06 4.2E-11 79.6 6.4 106 47-154 2-115 (117)
69 2ys3_A UNC-112-related protein 98.2 7.2E-06 2.5E-10 76.7 9.8 104 44-153 7-111 (137)
70 4ejn_A RAC-alpha serine/threon 98.2 4.6E-06 1.6E-10 90.2 9.8 102 44-154 4-108 (446)
71 3lju_X ARF-GAP with dual PH do 98.1 3.7E-06 1.3E-10 91.0 8.0 99 45-154 145-246 (386)
72 2d9w_A Docking protein 2; PH d 97.9 8.5E-05 2.9E-09 68.5 11.0 105 44-153 10-120 (127)
73 3hk0_A Growth factor receptor- 97.8 5E-05 1.7E-09 78.1 9.6 107 43-154 129-240 (256)
74 4gmv_A RAS-associated and plec 97.8 5.9E-05 2E-09 78.5 9.1 106 44-154 156-266 (281)
75 2d9z_A Protein kinase C, NU ty 97.6 0.00034 1.2E-08 64.6 10.9 110 41-154 3-123 (129)
76 3a8n_A TIAM-1, T-lymphoma inva 97.5 0.00013 4.5E-09 75.9 7.1 101 42-154 7-124 (279)
77 2coa_A Protein kinase C, D2 ty 97.4 0.00089 3E-08 61.6 11.0 104 41-154 3-119 (125)
78 4f7h_A Fermitin family homolog 97.2 0.0021 7.2E-08 61.9 10.7 105 43-154 44-150 (173)
79 4bbk_A Kindlin-1, fermitin fam 97.0 0.0063 2.2E-07 58.1 11.6 106 43-154 23-129 (165)
80 3tl1_A WHIE ORF VI, polyketide 96.9 0.021 7.1E-07 54.1 15.3 142 262-431 6-147 (159)
81 2d4r_A Hypothetical protein TT 96.8 0.069 2.4E-06 46.8 16.6 139 261-430 4-144 (147)
82 3tvq_A Multifunctional cyclase 96.7 0.026 8.7E-07 54.0 14.3 142 262-431 6-147 (169)
83 1t17_A Conserved hypothetical 96.7 0.051 1.7E-06 49.6 15.6 113 260-399 3-118 (148)
84 3tfz_A Cyclase; helix-GRIP, BE 96.4 0.15 5.2E-06 48.0 17.3 145 260-431 6-160 (172)
85 3qwm_A Iqsec1, IQ motif and SE 95.9 0.048 1.6E-06 51.2 10.4 105 46-156 13-124 (140)
86 1v61_A RAC/CDC42 guanine nucle 95.8 0.013 4.5E-07 54.4 6.2 101 41-156 23-128 (132)
87 2pcs_A Conserved protein; stru 95.7 0.22 7.4E-06 45.7 14.4 143 261-431 5-149 (162)
88 3f08_A Uncharacterized protein 95.4 0.27 9.1E-06 45.5 13.7 136 261-431 4-139 (146)
89 3p9v_A Uncharacterized protein 95.3 0.42 1.4E-05 44.6 14.8 112 261-399 9-122 (161)
90 3ggn_A Uncharacterized protein 95.2 0.34 1.2E-05 44.7 13.8 142 260-432 5-148 (155)
91 2ns9_A Hypothetical protein AP 94.6 1.6 5.6E-05 39.2 16.4 140 261-430 15-156 (157)
92 1w1g_A HPDK1, 3-phosphoinositi 94.4 0.15 5E-06 48.5 9.0 90 44-154 50-139 (151)
93 1mai_A Phospholipase C delta-1 92.7 0.37 1.3E-05 44.0 8.5 99 50-155 17-122 (131)
94 2le1_A Uncharacterized protein 92.5 0.91 3.1E-05 41.2 10.8 139 261-432 4-145 (151)
95 3ijt_A SMU.440, putative uncha 91.8 2.8 9.7E-05 39.0 13.5 36 260-297 19-54 (155)
96 3p51_A Uncharacterized protein 91.7 4.6 0.00016 37.9 15.0 139 261-432 4-144 (160)
97 2dfk_A Collybistin II; DH doma 91.3 2 6.8E-05 46.0 13.4 114 42-160 253-369 (402)
98 1kz7_A Guanine nucleotide exch 90.4 1.5 5.2E-05 46.0 11.4 112 43-160 207-331 (353)
99 2pz1_A RHO guanine nucleotide 90.4 2.5 8.5E-05 45.9 13.4 109 43-156 331-442 (466)
100 1xcg_A PDZ-rhogef, RHO guanine 90.1 1.6 5.4E-05 45.7 11.2 104 43-155 250-367 (368)
101 3mpx_A FYVE, rhogef and PH dom 89.8 0.68 2.3E-05 49.8 8.2 97 44-155 242-338 (434)
102 2vrw_B P95VAV, VAV1, proto-onc 88.3 3.1 0.00011 44.3 12.0 105 44-156 232-337 (406)
103 2qpv_A Uncharacterized protein 86.6 8.1 0.00028 36.2 12.5 33 262-296 30-62 (156)
104 3odw_A RHO guanine nucleotide 86.3 3.1 0.00011 46.5 11.0 105 43-156 409-526 (536)
105 3p6a_A RHO guanine nucleotide 86.1 2.7 9.1E-05 44.1 9.8 102 44-154 257-371 (377)
106 1tw0_A Pathogenesis-related cl 86.0 19 0.00063 33.5 14.6 149 262-433 6-155 (157)
107 1nty_A Triple functional domai 85.7 5 0.00017 41.1 11.4 107 44-156 201-310 (311)
108 1txd_A RHO guanine nucleotide 85.4 5.1 0.00017 42.3 11.6 106 43-157 254-372 (385)
109 1e09_A PRU AV 1; allergen, maj 84.7 12 0.00042 34.8 12.7 148 262-433 6-156 (159)
110 3ky9_A Proto-oncogene VAV; cal 84.0 4.9 0.00017 45.2 11.2 104 44-155 404-508 (587)
111 3zvr_A Dynamin-1; hydrolase, D 81.5 4.6 0.00016 47.4 10.0 98 46-152 540-643 (772)
112 1dbh_A Protein (human SOS 1); 81.1 7.2 0.00025 40.5 10.5 100 43-154 244-349 (354)
113 2qim_A PR10.2B; trans-zeatin, 80.3 18 0.00061 33.6 11.9 149 261-433 6-156 (158)
114 2lg1_A A-kinase anchor protein 80.2 10 0.00035 36.5 10.4 102 44-155 69-173 (185)
115 3tfm_A Myosin X; split PH doma 78.4 2.2 7.5E-05 42.2 5.2 48 42-98 17-64 (228)
116 2rgn_B RHOA/RAC/CDC42 exchange 77.8 8.6 0.00029 40.2 9.9 110 44-158 205-323 (354)
117 3t06_A PDZ-rhogef, RHO guanine 77.1 13 0.00045 39.4 11.2 104 42-155 291-409 (418)
118 3rt2_A Abscisic acid receptor 75.1 45 0.0015 32.1 13.3 138 265-430 33-176 (183)
119 2z0q_A XPLN, RHO guanine nucle 75.0 5.1 0.00017 41.5 7.1 97 44-154 230-346 (346)
120 1zc3_B Exocyst complex protein 73.9 41 0.0014 29.7 11.8 101 45-154 7-107 (113)
121 3kl1_A PYL2, putative uncharac 72.5 72 0.0025 30.8 14.4 142 265-431 41-184 (190)
122 3jzy_A Intersectin 2; C2 domai 71.1 0.84 2.9E-05 49.8 0.0 100 44-156 251-364 (510)
123 3ksy_A SOS-1, SON of sevenless 69.9 15 0.00052 44.4 10.5 100 43-154 441-546 (1049)
124 1icx_A Protein LLR18A, LLPR10. 67.1 50 0.0017 30.4 11.3 148 262-433 6-154 (155)
125 3jrs_A PYL1, putative uncharac 64.4 56 0.0019 32.2 11.6 139 265-431 60-205 (208)
126 2flh_A Cytokinin-specific bind 59.1 1.1E+02 0.0038 28.1 14.6 144 261-431 5-153 (155)
127 3qrz_A Abscisic acid receptor 54.3 13 0.00046 37.1 5.1 111 266-399 85-197 (223)
128 3oqu_A Abscisic acid receptor 53.1 1.7E+02 0.0059 28.6 14.2 137 266-430 59-200 (205)
129 2pk2_A Cyclin-T1, protein TAT; 49.0 3.6 0.00012 43.8 0.0 8 57-64 325-332 (358)
130 2i9y_A Major latex protein-lik 47.9 1.2E+02 0.0041 28.2 10.4 143 261-431 19-165 (166)
131 3ml4_A Protein DOK-7; tyrosine 44.6 1.6E+02 0.0053 29.5 11.0 97 44-152 7-111 (224)
132 1v5m_A SH2 and PH domain-conta 43.1 1.9E+02 0.0063 26.8 10.4 100 41-154 13-130 (136)
133 1foe_A T-lymphoma invasion and 41.6 2.2E+02 0.0076 29.4 12.5 26 129-154 341-366 (377)
134 3k3k_A Abscisic acid receptor 41.3 2E+02 0.0069 28.3 11.2 107 265-399 56-172 (211)
135 3q6a_A Uncharacterized protein 30.2 44 0.0015 29.2 4.1 29 261-291 3-31 (135)
136 3rws_A MTN13 protein; zeatin, 28.2 3.7E+02 0.013 25.1 14.2 149 261-433 11-162 (168)
137 2vjg_A Major allergen DAU C 1; 26.8 3.7E+02 0.013 24.6 10.5 119 261-399 6-126 (154)
138 4a8u_A Major pollen allergen B 26.6 3.8E+02 0.013 24.6 15.4 149 262-433 6-156 (159)
139 2leq_A Uncharacterized protein 22.9 38 0.0013 29.3 2.2 29 260-290 6-34 (146)
140 3pu2_A Uncharacterized protein 21.7 82 0.0028 28.8 4.4 31 259-291 13-43 (164)
141 2zkm_X 1-phosphatidylinositol- 21.6 1.6E+02 0.0054 34.6 7.7 98 50-154 21-135 (799)
142 2l8o_A Uncharacterized protein 21.3 32 0.0011 30.7 1.4 28 260-289 3-30 (144)
143 1fho_A UNC-89; pleckstrin homo 20.9 2.8E+02 0.0097 24.6 7.6 102 43-154 7-112 (119)
No 1
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=325.81 Aligned_cols=208 Identities=16% Similarity=0.185 Sum_probs=177.2
Q ss_pred CCcccCCCCCCCCccCcCCCCCcc--cccccCCCCEEEEEeCCEEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHHHc
Q 005902 203 ETLLRQSSDLGGSVRGEGFFEGDI--GDAIEAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLN 280 (671)
Q Consensus 203 ~~~~~~w~~~~~~~~~~l~~~~~~--~~~~a~sgW~l~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L~d 280 (671)
..++++||++||+ ||+|+|++ +++++++||++..+++||+||+++.. ....+|++++|++||++||++|+|
T Consensus 37 ~p~~~~w~~~~~~---~l~~~n~~al~~l~~~~gW~~~~~~~gv~Vy~~~~~----~~l~~k~~~~v~~~~~~v~~~L~D 109 (258)
T 3fo5_A 37 VPLSVPWDPSNQV---YLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLEDD----KFLSFHMEMVVHVDAAQAFLLLSD 109 (258)
T ss_dssp SCSEEECCGGGHH---HHHHHHHHHHHHHHTCSCCEEEEEETTEEEEEEECS----SCEEEEEEEEESSCHHHHHHHHHC
T ss_pred CCcccccCcccce---ecccCCHHHHHhhhccCCCEEEecCCCeEEEEEECC----CceEEEEEEEEeCCHHHHHHHHhC
Confidence 3589999999999 99999996 88999999999999999999998642 246789999999999999999999
Q ss_pred cCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEc-CCC-cEEEEEeeccCCCCCCCCC
Q 005902 281 LERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRG-QDG-TYTILQFPAVHKKRPPKSG 358 (671)
Q Consensus 281 ~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~-~dG-sYvIa~~SV~Hp~~Pp~~g 358 (671)
++. |++||+++.++++||++|++ +++|+...|.. ++++++||||++|+||+. .+| .|+|+.+||+||.+||++|
T Consensus 110 ~~~--R~~WD~~~~~~~vle~id~~-~ivY~~~~p~~-~~~v~~RDFV~lr~~r~~~~~G~~yvi~~~SV~hp~~Pp~~g 185 (258)
T 3fo5_A 110 LRQ--RPEWDKHYRSVELVQQVDED-DAIYHVTSPAL-GGHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETPE 185 (258)
T ss_dssp GGG--GGGTCTTCCEEEEEEEEETT-EEEEEEEECCC-TTCSSCEEEEEEEEEECCSSTTCCEEEEEEEEECTTSCCCTT
T ss_pred chh--HhHhhhhccEEEEEEEcCCC-eEEEEEecCCc-cCCCCCCEEEEEEEEEeccCCCCEEEEEEEeccCCCCCCCCC
Confidence 886 99999999999999999999 78887766642 257999999999999874 356 5999999999999999999
Q ss_pred eeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHHHHHHHHHHHHHHhcCC
Q 005902 359 YRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANP 432 (671)
Q Consensus 359 ~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~~Va~LRe~~~~~~ 432 (671)
||||+++++||+|+|+++ +.|+|+|+.|+|+ |.+ |.|...+.+ +...+.++..+|++++....
T Consensus 186 ~VR~~~~~sg~~I~P~~~------~~t~VtY~~q~dp-G~l---P~~~~n~~g-~s~~~~~t~~~~~~fl~~~~ 248 (258)
T 3fo5_A 186 YRRGETLCSGFCLWREGD------QLTKVSYYNQATP-GVL---NYVTTNVAG-LSSEFYTTFKACEQFLLDNR 248 (258)
T ss_dssp SEECCCSSEEEEEEEEET------TEEEEEEEESCCG-GGH---HHHHHHHHT-SCCHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEcCcEEEEEECCC------CCEEEEEEEeeCC-CCC---CceEEeccc-cchHHHHHHHHHHHHHHhcc
Confidence 999999999999999986 6899999999999 557 544332222 12234556678999988764
No 2
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=100.00 E-value=3.8e-35 Score=293.13 Aligned_cols=186 Identities=18% Similarity=0.268 Sum_probs=161.9
Q ss_pred cCCCCEEEE-EeCCEEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHHH-ccCCcccccccCCCCceEEEEeecCceEE
Q 005902 231 EAHEWKCVR-TLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDGHYDV 308 (671)
Q Consensus 231 a~sgW~l~~-~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L~-d~~~~~R~eWD~~~~~~eVVE~lD~~tDI 308 (671)
+++||++.. +++|++||++..+. . +.++|++++|+++|++||++|+ |++. |++||+++.++++|+++|++++|
T Consensus 29 ~~~gW~~~~~~~~gv~vy~~~~~~--~-g~~~k~~~~v~~~~~~v~~~l~~d~~~--r~~Wd~~~~~~~vle~~~~~t~I 103 (221)
T 3p0l_A 29 NQEGWKKESQQDNGDKVMSKVVPD--V-GKVFRLEVVVDQPMERLYEELVERMEA--MGEWNPNVKEIKVLQKIGKDTFI 103 (221)
T ss_dssp SCTTCEEEEECTTSCEEEEEECSS--S-CEEEEEEEEESSCHHHHHHHHTTTGGG--TTTSCTTCSEEEEEEECSSSEEE
T ss_pred CCCCCeEeeecCCCcEEEEEEcCC--C-ceEEEEEEEEcCCHHHHHHHHHhccch--hhhcCcchheEEEEEecCCCeEE
Confidence 578999995 89999999997642 2 5899999999999999999994 7775 99999999999999999999999
Q ss_pred EEEEecCCcCCCCCCCCeEEEEEEEEEcCCCcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEE
Q 005902 309 VYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVT 388 (671)
Q Consensus 309 vY~~~kp~~~P~~vspRDFV~LRswRr~~dGsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT 388 (671)
+|++.++. +++++++||||++|+|++. +|+|+++.+||+||.+||++|||||+++++||+|+|+++ ++++|+||
T Consensus 104 ~y~~~~~~-~~~~v~~RDfv~~r~~~~~-~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~----~~~~t~vt 177 (221)
T 3p0l_A 104 THELAAEA-AGNLVGPRDFVSVRCAKRR-GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAG----SPSKTKLT 177 (221)
T ss_dssp EEEEECC----CCSCCEEEEEEEEEEEC-SSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETT----EEEEEEEE
T ss_pred EEEeeccc-cCCccCCceEEEEEEEEEc-CCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCC----CCCcEEEE
Confidence 99887652 2457999999999999986 478999999999999999999999999999999999986 34589999
Q ss_pred EEEeeecCCCccccccccccchhhhHHHHHHHHHHHHHHHhcCC
Q 005902 389 QMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANP 432 (671)
Q Consensus 389 ~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~~Va~LRe~~~~~~ 432 (671)
|++|+||+||+ |.| .+.+.+...|+.++.+||+.++..+
T Consensus 178 ~~~~~Dp~G~i---P~~--lvn~~~~~~~~~~~~~Lr~~~~~~~ 216 (221)
T 3p0l_A 178 WLLSIDLKGWL---PKS--IINQVLSQTQVDFANHLRKRLESHP 216 (221)
T ss_dssp EEECEECCSSC---CHH--HHHHHHHHHHHHHHHHHHHHTC---
T ss_pred EEEEecCCCCC---CHH--HHHHHHHHHHHHHHHHHHHHHhhch
Confidence 99999999999 655 4566777889999999999998543
No 3
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=287.86 Aligned_cols=187 Identities=21% Similarity=0.213 Sum_probs=163.1
Q ss_pred cCCCCEEEEEeCCEEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHH--HccCCcccccccCCCCceEEEEeecCceEE
Q 005902 231 EAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVV--LNLERHQRYEWDMLTGDLELVDSYDGHYDV 308 (671)
Q Consensus 231 a~sgW~l~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L--~d~~~~~R~eWD~~~~~~eVVE~lD~~tDI 308 (671)
++.+|+++.+++|++||++..+. ..+.++|++++|+++|++||++| +|.+. |++||.++.++++|+++|++++|
T Consensus 41 ~~~~W~~~~~~~gv~v~~~~~~~--~~~~~~k~~~~v~~~~~~v~~~l~~~d~~~--r~~Wd~~~~~~~vle~i~~~~~i 116 (231)
T 2r55_A 41 DTAGWKICREGNGVSVSWRPSVE--FPGNLYRGEGIVYGTLEEVWDCVKPAVGGL--RVKWDENVTGFEIIQSITDTLCV 116 (231)
T ss_dssp CCSSCEEEECCSSEEEEEEECSS--SSSEEEEEEEEESSCHHHHHHHHCC--CCS--HHHHCTTCSEEEEEEECSSSEEE
T ss_pred CCCCCEEEEeCCCEEEEEEccCC--CCCcEEEEEEEECCCHHHHHHHHHhhCcch--hhhhccccceeEEEEEcCCCEEE
Confidence 35799999999999999997632 35689999999999999999999 77775 99999999999999999999999
Q ss_pred EEEEecCCcCCCCCCCCeEEEEEEEEEcCCCcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEE
Q 005902 309 VYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVT 388 (671)
Q Consensus 309 vY~~~kp~~~P~~vspRDFV~LRswRr~~dGsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT 388 (671)
+|++..+ ++++++++||||++|+|++.++|+|+|+.+||+||.+||.+|||||++.++||+|+|+++ ++++|+||
T Consensus 117 ~~~~~~~-~~~~~v~~RDfv~~r~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~----~~~~t~vt 191 (231)
T 2r55_A 117 SRTSTPS-AAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPG----EPTKTNLV 191 (231)
T ss_dssp EEEECCC-BTTTTBCCEEEEEEEEEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC------CCCEEEE
T ss_pred EEEEecc-ccCCccCCCeEEEEEEEEEcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCC----CCCcEEEE
Confidence 8876554 345689999999999999998899999999999999999999999999999999999974 24689999
Q ss_pred EEEeeecCCCccccccccccchhhhHHHHHHHHHHHHHHHhcC
Q 005902 389 QMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGAN 431 (671)
Q Consensus 389 ~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~~Va~LRe~~~~~ 431 (671)
|++++|++||+ |.+ .+...+...|+..+++||++++..
T Consensus 192 ~~~~~Dp~G~i---P~~--lvn~~~~~~~~~~~~~Lr~~~~~~ 229 (231)
T 2r55_A 192 TFFHTDLSGYL---PQN--VVDSFFPRSMTRFYANLQKAVKQF 229 (231)
T ss_dssp EEECEECCSSC---CHH--HHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred EEEEeCCCCCc---cHH--HHHHHHhHhHHHHHHHHHHHHHHh
Confidence 99999999999 654 345567778899999999998764
No 4
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=100.00 E-value=2.2e-34 Score=288.71 Aligned_cols=182 Identities=18% Similarity=0.272 Sum_probs=161.1
Q ss_pred CCCCEEEEEeCCEEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEE
Q 005902 232 AHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYG 311 (671)
Q Consensus 232 ~sgW~l~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~ 311 (671)
..||++.++++||+||++... .+.+.++|++++|+++|++||++|+|... |++||+++.++++||++|++++|+|+
T Consensus 42 ~~~W~~~~~~~gv~vy~~~~~--~~~~~~~k~~~~v~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~id~~~~I~y~ 117 (224)
T 1jss_A 42 EDEWRVAKKAKDVTVWRKPSE--EFNGYLYKAQGVMDDVVNNVIDHIRPGPW--RLDWDRLMTSLDVLEHFEENCCVMRY 117 (224)
T ss_dssp GGGCEEEEEETTEEEEEEECS--SSSSEEEEEEEEESSCHHHHHHHHSSSTT--HHHHCSSEEEEEEEEECSTTEEEEEE
T ss_pred CCCCEEEEECCCEEEEEEecc--CCCceEEEEEEEEeCCHHHHHHHHhCccc--ccccccceeeEEEEEEcCCCeEEEEE
Confidence 578999999999999999543 24568999999999999999999999775 99999999999999999999999999
Q ss_pred EecCCcCCCCCCCCeEEEEEEEEEcCCCcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEE
Q 005902 312 TYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQML 391 (671)
Q Consensus 312 ~~kp~~~P~~vspRDFV~LRswRr~~dGsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~ 391 (671)
++++.+ ++++++||||++|+|++.+|| |+++++||+||.+| +|||||+++++||+|+|+++ ++++|+|||++
T Consensus 118 ~~~~~~-~~~v~~RDfv~~r~~~~~~~~-~vi~~~Sv~hp~~~--~g~VR~~~~~~g~~i~p~~~----~~~~t~vt~~~ 189 (224)
T 1jss_A 118 TTAGQL-LNIISPREFVDFSYTVGYEEG-LLSCGVSVEWSETR--PEFVRGYNHPCGWFCVPLKD----SPSQSLLTGYI 189 (224)
T ss_dssp EECCBT-TTTBCCEEEEEEEEEEEETTE-EEEEEEECCCCCCC--TTSEECEECSEEEEEEEETT----EEEEEEEEEEE
T ss_pred Eccccc-CCCCCCCeEEEEEEEEEcCCe-EEEEEeeeecCCCC--CCCEEEEecccEEEEEEcCC----CCCceEEEEEE
Confidence 998754 345999999999999998776 88899999999995 49999999999999999975 34689999999
Q ss_pred eeecCCCccccccccccchhhhHHHHHHHHHHHHHHHhc
Q 005902 392 EIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGA 430 (671)
Q Consensus 392 qvDlKGw~~w~p~~~~~~~~~~~~~mL~~Va~LRe~~~~ 430 (671)
++||+||+ |.| .+.+.+...|+.++.+||++++.
T Consensus 190 ~~Dp~G~i---P~~--lvn~~~~~~~~~~~~~Lr~~~~~ 223 (224)
T 1jss_A 190 QTDLRGMI---PQS--AVDTAMASTLANFYSDLRKGLRK 223 (224)
T ss_dssp CEECCSCC---CHH--HHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EeCCCCCc---cHH--HHHHHHHHhHHHHHHHHHHHHhh
Confidence 99999999 655 45667788899999999998864
No 5
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=100.00 E-value=7.2e-34 Score=288.64 Aligned_cols=184 Identities=18% Similarity=0.200 Sum_probs=157.5
Q ss_pred cCCCCEEEEEeCCEEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEE
Q 005902 231 EAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVY 310 (671)
Q Consensus 231 a~sgW~l~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY 310 (671)
...||++..+++||+||++..+ .++...++|++++|+++++++|..|+. .|++||+++.++++||++|++++|+|
T Consensus 48 ~~~gW~~~~~~~gi~V~~k~~~-~~~~~~~~K~~~~v~~~~~~v~~~ll~----dr~~Wd~~~~~~~vle~id~~~~I~y 122 (237)
T 2pso_A 48 KFKGWVTCSSTDNTDLAFKKVG-DGNPLKLWKASVEVEAPPSVVLNRVLR----ERHLWDEDFVQWKVVETLDRQTEIYQ 122 (237)
T ss_dssp HCCSCEEECCSSSCEEEEECCC-SSCCCCEEEEEEEESSCHHHHHHHHHH----CGGGTCTTBCCCEEEEEEETTEEEEE
T ss_pred CCCCCEEEecCCCeEEEEEEcC-CCCCcEEEEEEEEEcCChHHHHHHHHh----hhhhHHhhhceEEEEEEcCCCcEEEE
Confidence 4789999999999999999642 235668999999999999998765443 39999999999999999999999999
Q ss_pred EEecCCcCCCCCCCCeEEEEEEEEEc-CCCcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEE
Q 005902 311 GTYDPKYLTRWQSKRDFVFSRQWFRG-QDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQ 389 (671)
Q Consensus 311 ~~~kp~~~P~~vspRDFV~LRswRr~-~dGsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~ 389 (671)
+++++.| ++++||||++|+|+++ ++|+|+|+++||+||++||+ |||||+++++||+|+|+++ ++|+|||
T Consensus 123 ~~~~~p~---p~~~RDfv~~r~~r~~~~~g~~vi~~~Sv~h~~~P~~-g~VR~~~~~~g~~i~P~~~------~~t~vt~ 192 (237)
T 2pso_A 123 YVLNSMA---PHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLL-GGVRAVVMDSQYLIEPCGS------GKSRLTH 192 (237)
T ss_dssp EEECCSS---SCCCEEEEEEEEEESCCGGGCEEEEEEECCCTTCCCC-SSEECCEEEEEEEEEECST------TCEEEEE
T ss_pred EEecCCC---CcCCeEEEEEEEEEEECCCCEEEEEEEcccCCCCCCC-CcEEEEEeccEEEEEECCC------CCEEEEE
Confidence 9998654 6999999999999974 67899999999999999999 9999999999999999965 6899999
Q ss_pred EEeeecCCCccccccccccchhhhHHHHHHHHHHHHHHHhcCCCCC
Q 005902 390 MLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANPALK 435 (671)
Q Consensus 390 I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~~Va~LRe~~~~~~~~~ 435 (671)
++++||+||+ |.|++.+. ...+..++.+||+.|++.....
T Consensus 193 ~~~~Dp~G~i---P~~ln~~~---~~~~~~~l~~LR~~~~~~~~~~ 232 (237)
T 2pso_A 193 ICRIDLKGHS---PEWYSKGF---GHLCAAEVARIRNSFQPLIAEG 232 (237)
T ss_dssp EEEECCSSSC---TTTTTTHH---HHHHHHHHHHHHHTTSCC----
T ss_pred EEEeCCCCCc---hHHHHHHH---HHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999 77764444 4445568999999999875433
No 6
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=100.00 E-value=5.2e-34 Score=286.02 Aligned_cols=186 Identities=18% Similarity=0.243 Sum_probs=162.4
Q ss_pred cCCCCEEEEEe-CCEEEEEEecCCCCCcccEEEEEEeecCCHHHHH-HHHHccCCcccccccCCCCceEEEEeecCceEE
Q 005902 231 EAHEWKCVRTL-NGVRIFEDVADSKSGRGVLVKAVGVIDASADTVF-EVVLNLERHQRYEWDMLTGDLELVDSYDGHYDV 308 (671)
Q Consensus 231 a~sgW~l~~~k-ngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vf-e~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDI 308 (671)
+.+||++..+. ||++||++..+. .+..+|++++|+++|++|| +++.|.+. |++||+++.++++|+++|++++|
T Consensus 40 ~~~~W~~~~~~~~g~~vy~~~~~~---~g~~~k~~~~v~~~~~~v~~~~~~d~~~--r~~Wd~~~~~~~vle~~~~~t~I 114 (229)
T 1em2_A 40 QEENWKFEKNNEYGDTVYTIEVPF---HGKTFILKTFLPCPAELVYQEVILQPER--MVLWNKTVTACQILQRVEDNTLI 114 (229)
T ss_dssp TGGGCEEEEECTTCCEEEEEEETT---TEEEEEEEEEESSCHHHHHHHTTTCHHH--HTTTCTTEEEEEEEEEETTTEEE
T ss_pred CCCCCEEEEecCCCCEEEEEecCC---CCceEEEEEEecCCHHHHHHHHHhCccc--hhhcccccceEEEEEecCCCeEE
Confidence 45799999997 899999997642 3458999999999999999 77778775 99999999999999999999999
Q ss_pred EEEEecCCcCCCCCCCCeEEEEEEEEEcCCCcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEE
Q 005902 309 VYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVT 388 (671)
Q Consensus 309 vY~~~kp~~~P~~vspRDFV~LRswRr~~dGsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT 388 (671)
+|++.+|. +++++++||||++|+|++.+ +.|+|+.+||.||.+||++|||||+++++||+|+|+++ ++++|+||
T Consensus 115 ~~~~~~p~-~~~~~~~RDfv~~r~~~~~~-~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~----~~~~t~vt 188 (229)
T 1em2_A 115 SYDVSAGA-AGGVVSPRDFVNVRRIERRR-DRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSAS----NPRVCTFV 188 (229)
T ss_dssp EEEEECCB-TTTTBCCEEEEEEEEEEECS-SEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSS----CTTCEEEE
T ss_pred EEEEecCc-CCCCcCCCeeEEEEEEEEcC-CEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCC----CCCcEEEE
Confidence 88877653 23579999999999999985 56999999999999999999999999999999999975 34789999
Q ss_pred EEEeeecCCCccccccccccchhhhHHHHHHHHHHHHHHHhcCC
Q 005902 389 QMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANP 432 (671)
Q Consensus 389 ~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~~Va~LRe~~~~~~ 432 (671)
|++++||+||+ |.| .+...+...|+.++.+||++++...
T Consensus 189 ~~~~~Dp~G~i---P~~--l~n~~~~~~~~~~~~~Lr~~~~~~~ 227 (229)
T 1em2_A 189 WILNTDLKGRL---PRY--LIHQSLAATMFEFAFHLRQRISELG 227 (229)
T ss_dssp EEECEECCSSS---CHH--HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCC---CHH--HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999 655 3566677788999999999998754
No 7
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=99.97 E-value=6.2e-30 Score=248.45 Aligned_cols=179 Identities=16% Similarity=0.181 Sum_probs=154.5
Q ss_pred CCCCEEEEEeCCEEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEE
Q 005902 232 AHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYG 311 (671)
Q Consensus 232 ~sgW~l~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~ 311 (671)
++||++..+++||+||++..+ .+....+|++++|+++|+++|++|.|++. |++||+.+.++++|++ +++++|+|+
T Consensus 2 ~~~W~~~~~~~gv~v~~~~~~--~~~~~~~k~~~~v~~s~~~v~~~l~D~~~--~~~W~~~~~~~~vle~-~~~~~i~y~ 76 (189)
T 3qsz_A 2 QDGWSLAKDAEGIKVYVRNVE--GSPLREFRGEVRLKAAADDVVKVLRDANA--FRQWMPDVAASELLKA-TDTEQYHYL 76 (189)
T ss_dssp -CCCEEEEEETTEEEEEECCT--TCSSCEEEEEEEESSCHHHHHHHHHCGGG--GGGTSTTEEEEEEEEE-CSSEEEEEE
T ss_pred CCCCEEEEcCCCEEEEEEeCC--CCCeEEEEEEEEEECCHHHHHHHHHhHHH--hhhHHHhcCEEEEEee-cCCceEEEE
Confidence 579999999999999999754 23457899999999999999999999986 9999999999999999 999999999
Q ss_pred EecCCcCCCCCCCCeEEEEEEEEEcCCCcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEE
Q 005902 312 TYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQML 391 (671)
Q Consensus 312 ~~kp~~~P~~vspRDFV~LRswRr~~dGsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~ 391 (671)
.++.. +++++||||++|+|++..+|+|+|...| .||.+|+++||||+.+..+||+|+| ++ ++|+|||++
T Consensus 77 ~~~~p---~p~~~RD~v~~~~~~~~~~g~~~i~~~~-~~~~~P~~~~~VR~~~~~~~~~i~p-~~------~~t~vt~~~ 145 (189)
T 3qsz_A 77 DNSAP---WPVSNRDGVYHFTYEKAGDGAITVRVEA-VPDYLPLRKGKVRIPRAKGQWTLVP-DA------DGVDVTYQM 145 (189)
T ss_dssp EECCS---SSCCCEEEEEEEEEEECTTSCEEEEEEE-CTTSSCCCTTSEECCCEEEEEEEEE-CS------SSEEEEEEE
T ss_pred EeecC---CCcCCcceEEEEEEEECCCCeEEEEEEc-CCCccCCCCCeEEeeEeeEEEEEEE-CC------CeEEEEEEE
Confidence 88854 4699999999999999877888877776 7999999999999999999999999 54 589999999
Q ss_pred eeecCCCccccccccccchhhhHHHHHHHHHHHHHHHhcC
Q 005902 392 EIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGAN 431 (671)
Q Consensus 392 qvDlKGw~~w~p~~~~~~~~~~~~~mL~~Va~LRe~~~~~ 431 (671)
++||+||+ |.|+ +...+...+...+.+||+.++.-
T Consensus 146 ~~dp~G~i---P~~l--vn~~~~~~~~~~l~~L~k~~~~~ 180 (189)
T 3qsz_A 146 HASPGGSI---PSWL--ANQTVVETPFGTLKALRSHLRQA 180 (189)
T ss_dssp EECSCSSS---CHHH--HHHTTTHHHHHHHHHHHHHHTC-
T ss_pred EeCCCCCC---CHHH--HHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999 5442 33344445567889999988764
No 8
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=99.96 E-value=2.9e-29 Score=255.66 Aligned_cols=194 Identities=14% Similarity=0.244 Sum_probs=154.2
Q ss_pred ccccCCCCEEEEEeCCEEEEEEecCCCCCcccEEEEEEeec-CCHHHHHHHHHccCCcccccccCCCCceEEEEeecCce
Q 005902 228 DAIEAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVID-ASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY 306 (671)
Q Consensus 228 ~~~a~sgW~l~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVd-aspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~t 306 (671)
.+.+..+|+++.+++|++||++..+..+.....+|+.+++. ++|++||++|+|++. |++||+++.++++||++|+++
T Consensus 42 ~~~~~~~W~~~~~~~gv~vy~~~~~~~g~~~~~~K~~~~~~~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~i~~~~ 119 (255)
T 2e3n_A 42 DVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDV--RNDWETTIENFHVVETLADNA 119 (255)
T ss_dssp CCTTCTTEEEEEEETTEEEEEECCEETTEECCCEEEEEEEETCCHHHHHHHHHCGGG--HHHHCCSEEEEEEEEEEETTE
T ss_pred hcCCCCCcEEEEeCCCEEEEEEEcCCCCceeeeEEEEEEEcCCCHHHHHHHHhCcch--HhhhhhhcceeEEEEEcCCCC
Confidence 34456899999999999999996442222223689988875 899999999999885 999999999999999999999
Q ss_pred EEEEEEecCCcCCCCCCCCeEEEEEEEEEc----CC--CcEEEEEeeccCCCCCCCCCeeeEE---EcCeeEEEEecCCC
Q 005902 307 DVVYGTYDPKYLTRWQSKRDFVFSRQWFRG----QD--GTYTILQFPAVHKKRPPKSGYRRTK---INPSTWEIRSLNLP 377 (671)
Q Consensus 307 DIvY~~~kp~~~P~~vspRDFV~LRswRr~----~d--GsYvIa~~SV~Hp~~Pp~~g~VRAe---v~~sGylI~P~~~~ 377 (671)
+|+|++++.. +++++||||++|+|++. ++ +.|+++.+|+.||.+|+++|||||+ ++++||+|+|..+.
T Consensus 120 ~i~y~~~~~p---~p~s~RDfV~~r~~~~~~~~~~~g~~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~g~ 196 (255)
T 2e3n_A 120 IIIYQTHKRV---WPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGN 196 (255)
T ss_dssp EEEEEEECCC---TTSCCEEEEEEEEEEEECCSSTTSCCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CC
T ss_pred EEEEEEeecC---CCcCCceeEEEEEEEeccccccCCCCEEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEeccCCCC
Confidence 9999998854 46899999999999986 32 4899999999999999999999999 57899999997321
Q ss_pred C--CCCCCceEEEEEEeeecCCCccccccccccchhhhHHHHHHHHHHHHHHHhcC
Q 005902 378 M--GSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGAN 431 (671)
Q Consensus 378 ~--~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~~Va~LRe~~~~~ 431 (671)
- ..++++|+|||++++||+||+ |.|+ +.......+..++.+||+++..+
T Consensus 197 ~~l~~~~~~t~vt~~~~~Dp~G~i---P~~l--vn~~~~~~~~~~l~~L~k~v~~~ 247 (255)
T 2e3n_A 197 QEISRDNILCKITYVANVNPGGWA---PASV--LRAVAKREYPKFLKRFTSYVQEK 247 (255)
T ss_dssp CCCCGGGEEEEEEEEEEEECSSCC---CHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCcEEEEEEEEeCCCCcc---CHHH--HHHHHhccccHHHHHHHHHHHHh
Confidence 0 002368999999999999999 5542 22233344566788888887653
No 9
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=99.96 E-value=4.8e-29 Score=246.07 Aligned_cols=180 Identities=19% Similarity=0.187 Sum_probs=152.0
Q ss_pred cCCCCEEEEEeCCEEEEEEecCCCCCcccEEEEEEee-cCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEE
Q 005902 231 EAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVI-DASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVV 309 (671)
Q Consensus 231 a~sgW~l~~~kngVrVy~~~~~~~~~~~~~~Ka~gvV-daspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIv 309 (671)
+..+|+++.+++|++||++..+. +....+|++++| +++|++||++|+|.+. |++||+++.++++|+. ++ ++|+
T Consensus 26 ~~~~W~~~~~~~~v~v~~~~~~~--~~~~~~k~~~~i~~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~-~~-~~i~ 99 (214)
T 1ln1_A 26 AGADWQLLVETSGISIYRLLDKK--TGLYEYKVFGVLEDCSPTLLADIYMDSDY--RKQWDQYVKELYEQEC-NG-ETVV 99 (214)
T ss_dssp TTTTCEEEEEETTEEEEEEEETT--TTEEEEEEEEEETTSCHHHHHHHHHCHHH--HHHHCTTEEEEEEEEE-TT-EEEE
T ss_pred CCCCcEEEEECCCeEEEEeccCC--CCcEEEEEEEEECCCCHHHHHHHHcCHHH--HHHHHHHHhhEEEecc-CC-CEEE
Confidence 46799999999999999996542 445789999999 5999999999999875 9999999999999998 55 7899
Q ss_pred EEEecCCcCCCCCCCCeEEEEEEEEEc-CCC--cEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceE
Q 005902 310 YGTYDPKYLTRWQSKRDFVFSRQWFRG-QDG--TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCL 386 (671)
Q Consensus 310 Y~~~kp~~~P~~vspRDFV~LRswRr~-~dG--sYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~ 386 (671)
|++++.. +++++||||++|+|++. ++| .|+++.+||.||++|+++|+|||++..+||+|+|+++ ++|+
T Consensus 100 ~~~~~~p---~p~~~RD~v~~~~~~~~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~------~~t~ 170 (214)
T 1ln1_A 100 YWEVKYP---FPMSNRDYVYLRQRRDLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGK------KGSK 170 (214)
T ss_dssp EEEECCC---TTSCCEEEEEEEEEEEECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSS------SSEE
T ss_pred EEEEEcC---CCCCCceEEEEEEEEecccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCC------CceE
Confidence 9999853 46899999999999875 366 3789999999999999999999999999999999864 6899
Q ss_pred EEEEEeeecCCCcccccccc-ccchhhhHHHHHHHHHHHHHHHhcC
Q 005902 387 VTQMLEIHSSGWCRWKKNSS-TKFEKTTHFALLSQVAGLKEYIGAN 431 (671)
Q Consensus 387 VT~I~qvDlKGw~~w~p~~~-~~~~~~~~~~mL~~Va~LRe~~~~~ 431 (671)
|||++++|++||+ |.|+ +.+.+ ..+...+.+||+.+..-
T Consensus 171 v~~~~~~Dp~G~i---P~~l~n~~~~---~~~~~~l~~l~k~~~~y 210 (214)
T 1ln1_A 171 VFMYYFDNPGGQI---PSWLINWAAK---NGVPNFLKDMARACQNY 210 (214)
T ss_dssp EEEEEEECCSSCC---CHHHHHHHHH---THHHHHHHHHHHHHHTC
T ss_pred EEEEEEECCCCcc---cHHHHHHHHH---HHhHHHHHHHHHHHHhc
Confidence 9999999999999 5442 33333 34456788888887643
No 10
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.46 E-value=5.3e-14 Score=128.52 Aligned_cols=107 Identities=15% Similarity=0.217 Sum_probs=74.6
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccc---eeeeec-CcceeecccceeeeCceEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPI---RRGVIG-PTLMVEELGRRRFNHGDVYV 119 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pi---r~~~i~-~~~~v~d~Gr~~~~~~~~yv 119 (671)
..+.++||||+-|. +...| ++|||||+++.|.|||.++...+...|+ ..|+|+ .+|.|+. ..+. +.+.-|+
T Consensus 10 ~~~~k~G~L~K~g~--~~k~W-k~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~-~~~~-~~~k~~~ 84 (124)
T 2w2x_D 10 DEHKQQGELYMWDS--IDQKW-TRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVK-APQG-KNQKSFV 84 (124)
T ss_dssp ---CCEEEEEEEET--TTTEE-EEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEE-CTTC-BTTBSEE
T ss_pred hhcceeEEEEEECC--CCCCc-eEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEE-ccCC-cCCCCEE
Confidence 56779999999763 33445 9999999999999999764321122343 344444 5556553 2322 2344589
Q ss_pred EEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 120 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 120 ~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
|.|++...+.+.+.|+|.|.||+..||+||+.|+..
T Consensus 85 F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 85 FILEPKQQGDPPVEFATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp EEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred EEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence 999998877788999999999999999999999873
No 11
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.17 E-value=2.8e-10 Score=100.48 Aligned_cols=103 Identities=13% Similarity=0.259 Sum_probs=73.2
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEE
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~ 122 (671)
.+.+.++|||++-|. ....| ++|||||.+..|.|||.+... .|...+.+.. |.|.+....... ..-|+|.|
T Consensus 5 ~~~~~~~G~L~K~g~--~~~~W-k~R~fvL~~~~L~yy~~~~~~----~~~g~i~L~~-~~v~~~~~~~~~-~~~~~f~i 75 (118)
T 1v89_A 5 SSGPIKMGWLKKQRS--IVKNW-QQRYFVLRAQQLYYYKDEEDT----KPQGCMYLPG-CTIKEIATNPEE-AGKFVFEI 75 (118)
T ss_dssp SSCEEEEEEEEEECS--SSSCE-EEEEEEEETTEEEEESSSSCC----SCSEEECSTT-EEEEEECCCSSC-CCCCEEEE
T ss_pred CCCCcEEEEEEecCC--CCCCc-cEEEEEEECCEEEEEeCCCCC----CceEEEECCC-CEEEEcCcCccc-CCcceEEE
Confidence 356779999999764 34456 999999999999999976543 3444444433 344332211111 22478888
Q ss_pred Eecc-----CcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 123 YNRL-----DESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 123 yn~~-----~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
..+. ...+.+.|.|.|.+|+..|++||++|+.
T Consensus 76 ~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 76 IPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp EESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 8753 2577899999999999999999999987
No 12
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.17 E-value=1.5e-10 Score=107.25 Aligned_cols=99 Identities=15% Similarity=0.263 Sum_probs=73.0
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEE
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~ 122 (671)
.+.+.++|||++-| ....| ++|||||+++.|.|||.+.. ..|+-.+.+.++. |.+.- ..+.=|.|.|
T Consensus 5 ~~~v~k~GwL~K~g---~~k~W-krRWfVLk~~~L~yyk~~~~----~~p~G~I~L~~~~-v~~~~----~~~~~~~F~i 71 (130)
T 1v88_A 5 SSGIVMADWLKIRG---TLKSW-TKLWCVLKPGVLLIYKTQKN----GQWVGTVLLNACE-IIERP----SKKDGFCFKL 71 (130)
T ss_dssp SSSCCEEEEEEECC---SSSSC-EEEEEEEETTEEEEESCSSS----CCCCEEEECSSCE-ECCCC----TTTSSCEEEE
T ss_pred CCceEEEeEEEEeC---CCCCc-eEEEEEEECCEEEEECCCCC----CCceEEEEcCCCE-EEECC----CCCCCeEEEE
Confidence 45677999999944 44577 99999999999999997653 3455555555444 43321 1223389999
Q ss_pred EeccCcC---------------------cceeeeccCHHHHHHHHHHHHHHHH
Q 005902 123 YNRLDES---------------------KKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 123 yn~~~~~---------------------~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
+++..++ +.+.|.|.|.+|+..||+||+.|+.
T Consensus 72 ~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 72 FHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp ECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred EcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 9876532 3478999999999999999999976
No 13
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.16 E-value=2.9e-10 Score=102.33 Aligned_cols=101 Identities=14% Similarity=0.235 Sum_probs=73.3
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~y 123 (671)
..+.++|||++.|... ...| ++|||||++..|.|||.+.. ..|...+.+ .+|.|+....+...++ -|+|.|.
T Consensus 19 ~~~~~~G~L~K~~~~~-~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L-~~~~v~~~~~~~~~~~-~~~F~i~ 90 (128)
T 2dkp_A 19 APVVRRGWLYKQDSTG-MKLW-KKRWFVLSDLCLFYYRDEKE----EGILGSILL-PSFQIALLTSEDHINR-KYAFKAA 90 (128)
T ss_dssp SCCCEEEEEEEECCSS-SCCE-EEEEEEEETTEEEEESSTTC----CSEEEEECG-GGSEEEECCGGGCCSS-CSEEEEE
T ss_pred CCcEEEEEEEEeCCCC-CCCc-eeEEEEEeCCEEEEECCCCC----cccceEEEc-CceEEEEcCCcccCCC-CeEEEEE
Confidence 4566999999977633 3456 99999999999999996543 345444444 4566665433322222 3788887
Q ss_pred eccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 124 n~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.+. .+.+.|.|.|.+|+..|++||++|+.
T Consensus 91 ~~~--~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 91 HPN--MRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp CSS--SCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred cCC--CCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 653 46788999999999999999999966
No 14
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=1.9e-10 Score=103.46 Aligned_cols=101 Identities=12% Similarity=0.254 Sum_probs=71.6
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeC--ceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRG--KYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMR 121 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~--~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~ 121 (671)
+.+.++|||++-|. ....| ++|||||++ ..|.|||.+.... ..|...+.+..+ .|+... ..-+.|.
T Consensus 6 ~~~~~~G~L~K~~~--~~~~W-k~R~fvL~~~~~~L~Yyk~~~~~~--~~~~g~I~L~~~-~v~~~~------~~~~~F~ 73 (120)
T 2d9x_A 6 SGENVYGYLMKYTN--LVTGW-QYRFFVLNNEAGLLEYFVNEQSRN--QKPRGTLQLAGA-VISPSD------EDSHTFT 73 (120)
T ss_dssp SCCCCEEEEEEEEE--TTTEE-EEEEEEECTTTCEEEEESSGGGSS--SCCSEEEECTTC-CEECCS------SSSSCEE
T ss_pred CCCcEEEEEEecCC--CCCCc-eEEEEEEECCCCEEEEEecCcccC--CCccceEEcceE-EEEecC------CCCCEEE
Confidence 35679999999773 33456 999999994 6999999766432 344445555443 344322 1126788
Q ss_pred EEeccCcCcceeeeccCHHHHHHHHHHHHHHHHHHHH
Q 005902 122 LYNRLDESKKGEIACATAGEARKWMEAFDQAKQQAEV 158 (671)
Q Consensus 122 ~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~~~ 158 (671)
|..+. .+.+.|.|.|.+|+..|++||++|+.....
T Consensus 74 i~~~~--~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (120)
T 2d9x_A 74 VNAAS--GEQYKLRATDAKERQHWVSRLQICTQHHTE 108 (120)
T ss_dssp ECCSS--SCCEEECCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCC--CCEEEEECCCHHHHHHHHHHHHHHHHHhhh
Confidence 87542 478899999999999999999999984433
No 15
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.15 E-value=2.2e-10 Score=99.38 Aligned_cols=102 Identities=15% Similarity=0.224 Sum_probs=72.0
Q ss_pred cceeeeEEEEEcccc--ccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEE
Q 005902 45 YFEYFGWVYHMGTNS--IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 45 ~~~~~Gw~y~~g~~~--~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~ 122 (671)
.+.++|||++-|... ++..| ++|||||.+..|.|||.+.. ..|...+.+.++. |...-......+.-|.|.|
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~~-v~~~~~~~~~~~~~~~F~i 75 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEW-QKRWCVVSRGLFYYYANEKS----KQPKGTFLIKGYS-VRMAPHLRRDSKKESCFEL 75 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEE-EEEEEEEETTEEEEESSTTC----SSCSEEEECTTCE-EEECGGGCSSGGGGGEEEE
T ss_pred CccEEEEEEEcCCCCCccccCc-eeeEEEEeCCEEEEecCCCC----CCCCEEEEecceE-EEeCCccccccCCcceEEE
Confidence 467999999988653 34666 89999999999999996553 3455555555444 3321110111222367888
Q ss_pred EeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 123 yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
..+ ..+.+.|.|.|.+|+..|++||+.|+.
T Consensus 76 ~~~--~~r~~~l~a~s~~e~~~Wi~ai~~~i~ 105 (108)
T 1u5d_A 76 TSQ--DRRTYEFTATSPAEARDWVDQISFLLK 105 (108)
T ss_dssp ECS--SSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EcC--CCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 753 237789999999999999999999987
No 16
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.14 E-value=1e-10 Score=100.46 Aligned_cols=93 Identities=11% Similarity=0.175 Sum_probs=68.5
Q ss_pred ceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEEec
Q 005902 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYNR 125 (671)
Q Consensus 46 ~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~yn~ 125 (671)
+.++|||++-| .+-.+| ++|||||++..|.||+.+.... ..|+-...+..+..+.+.... +.|.|..
T Consensus 1 V~k~G~L~K~g--~~~k~W-kkR~FvL~~~~L~Yy~~~~~~~--~~~~~~i~l~~~~~~~~~~~~-------~~F~i~~- 67 (94)
T 2rsg_A 1 VERCGVLSKWT--NYIHGW-QDRWVVLKNNALSYYKSEDETE--YGCRGSICLSKAVITPHDFDE-------CRFDISV- 67 (94)
T ss_dssp CCEEEEEEEES--SSTTCE-EEEEEEEETTEEEEESSTTGGG--TCCSEEEETTTCEEEECSSCS-------SEEEEEE-
T ss_pred CCEEEEEEEeC--CCCCCc-eEEEEEEECCEEEEEEeccccc--ccceeeEecceeeeecCcccc-------eeEEEEe-
Confidence 46899999976 344567 9999999999999999765433 456555555555555443322 3466654
Q ss_pred cCcCcceeeeccCHHHHHHHHHHHHHHH
Q 005902 126 LDESKKGEIACATAGEARKWMEAFDQAK 153 (671)
Q Consensus 126 ~~~~~~~~laa~~~eea~~W~~a~~~a~ 153 (671)
.++.+.|.|.|.+|+..||+||++|+
T Consensus 68 --~~r~~~l~A~s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 68 --NDSVWYLRAQDPDHRQQWIDAIEQHK 93 (94)
T ss_dssp --TTEEEEEECCSSCCTHHHHHHHHHHC
T ss_pred --CCeEEEEECCCHHHHHHHHHHHHhhc
Confidence 35778999999999999999999983
No 17
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=6.4e-10 Score=99.24 Aligned_cols=101 Identities=11% Similarity=0.205 Sum_probs=71.5
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~y 123 (671)
..+.++|||++-|.+. ...| ++|||||.+..|.|||.+... .|.....+..++ |...+.....++ =|.|.|.
T Consensus 20 ~~~~~~G~L~K~~~~~-~~~W-k~R~fvL~~~~L~yy~~~~~~----~~~g~i~L~~~~-v~~~~~~~~~~~-~~~F~i~ 91 (122)
T 2yry_A 20 APVTKAGWLFKQASSG-VKQW-NKRWFVLVDRCLFYYKDEKEE----SILGSIPLLSFR-VAAVQPSDNISR-KHTFKAE 91 (122)
T ss_dssp CCEEEEEEEEEECCSS-SCCE-EEEEEEEETTEEEEESSTTCC----SCCEEEESTTCC-CEECCTTCSCSS-SSEEEEE
T ss_pred CCccEEEEEEEECCCC-CCCc-EEEEEEEeCCEEEEECCCCCC----CcccEEEcCCCE-EEEcCccccCCc-ccEEEEe
Confidence 4567999999977443 3466 999999999999999976543 455455554443 543332222222 2677775
Q ss_pred eccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 124 n~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.. ..+.+.|.|.|.+|+..|++||+.|+.
T Consensus 92 ~~--~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 92 HA--GVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp CS--SSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cC--CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 33 357789999999999999999999975
No 18
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.13 E-value=1.7e-10 Score=103.89 Aligned_cols=104 Identities=13% Similarity=0.209 Sum_probs=76.3
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeC-ceeeeeccCCCCCC-CCccceeeeecCccee-ecccceeeeCceEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRG-KYVEMYKRDPHENP-GIKPIRRGVIGPTLMV-EELGRRRFNHGDVYVM 120 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~-~~l~~yK~~p~~~~-~~~pir~~~i~~~~~v-~d~Gr~~~~~~~~yv~ 120 (671)
+.+.++|||++-|. .-..| ++|||||++ ..|.|||.++...| +.+||....+-.+.-+ .+.++ =|.|
T Consensus 6 ~~~~~~G~L~K~g~--~~k~W-kkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~-------~~~F 75 (125)
T 1unq_A 6 VAIVKEGWLHKRGE--YIKTW-RPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPR-------PNTF 75 (125)
T ss_dssp GCEEEEEEEEEECS--SSCCE-EEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEECSSS-------TTEE
T ss_pred CCeeEEeeEEeccC--CccCc-cCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeeeecccccCC-------CCEE
Confidence 45679999999765 33456 999999996 59999998876554 3578887766543221 22222 2577
Q ss_pred EEEecc-CcCcceeeeccCHHHHHHHHHHHHHHHHHHH
Q 005902 121 RLYNRL-DESKKGEIACATAGEARKWMEAFDQAKQQAE 157 (671)
Q Consensus 121 ~~yn~~-~~~~~~~laa~~~eea~~W~~a~~~a~~~~~ 157 (671)
.|.... ...+.+.|.|.|.+|+..|++||+.|+.+..
T Consensus 76 ~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 113 (125)
T 1unq_A 76 IIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLK 113 (125)
T ss_dssp EEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence 887643 3456788999999999999999999998443
No 19
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.12 E-value=3.9e-10 Score=103.20 Aligned_cols=101 Identities=9% Similarity=0.174 Sum_probs=73.9
Q ss_pred ceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceee-------eCceEE
Q 005902 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRF-------NHGDVY 118 (671)
Q Consensus 46 ~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~-------~~~~~y 118 (671)
+..+|||++-| ++..+| ++|||||.+++|.|||.+.... +..|+-++.+ .+|.|+..-.+-. +..-.
T Consensus 6 ~~k~G~L~Kk~--~~~k~W-~~rwfVL~~~~L~yyK~~~~~~-d~~P~gsI~L-~~c~v~~~~~~~~~~~~~~~~~~~~- 79 (120)
T 4a6h_A 6 EIKSGFLERRS--KFLKSY-SKGYYVLTPNFLHEFKTADRKK-DLVPVMSLAL-SECTVTEHSRKNSTSSPNSTGSDAK- 79 (120)
T ss_dssp CSEEEEEEEEE--TTTTEE-EEEEEEECSSEEEEESSCCTTT-CCSCSEEEEG-GGEEEEEECCCCC---------CCE-
T ss_pred ccEEEEEEEcC--CCCCCC-ccEEEEEeCCEEEEEcCCCcCc-CCCceEEEEC-CCCEEEEcccccccccccccCCCcE-
Confidence 67999999955 477788 9999999999999999876433 4567777777 5677776443321 02223
Q ss_pred EEEEEeccC----cCcceeeeccCHHHHHHHHHHHHHHH
Q 005902 119 VMRLYNRLD----ESKKGEIACATAGEARKWMEAFDQAK 153 (671)
Q Consensus 119 v~~~yn~~~----~~~~~~laa~~~eea~~W~~a~~~a~ 153 (671)
|.|..+.. .++.+.|.|.|.+|+..|+++|+.|+
T Consensus 80 -F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 80 -FVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp -EEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred -EEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 44444332 24689999999999999999999884
No 20
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=3.9e-10 Score=100.60 Aligned_cols=96 Identities=10% Similarity=0.118 Sum_probs=70.1
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~y 123 (671)
..+.++|||++-|.. +...| ++|||||++..|.|||.+.. .|.. .++.-+|.|+.. .++. |.|.|.
T Consensus 8 ~~~~~~G~L~K~~~~-~~k~W-kkR~fvL~~~~L~yyk~~~~-----~~~~-~i~l~~~~v~~~-----~~~~-~~F~I~ 73 (114)
T 2da0_A 8 YGSEKKGYLLKKSDG-IRKVW-QRRKCSVKNGILTISHATSN-----RQPA-KLNLLTCQVKPN-----AEDK-KSFDLI 73 (114)
T ss_dssp CCSCEEEEEEEECSS-SCCCE-EEEEEEEETTEEEECCSSCC-----SCCE-EEETTTSEEEEC-----SSSS-SCEEEE
T ss_pred CCccEEEEEEEeCCC-CCCCc-eeEEEEEeCCEEEEEcCCCC-----CCCC-EEEeeeeEEEEC-----CCCC-CEEEEE
Confidence 346699999998753 44677 99999999999999997432 2333 344445555411 1111 477887
Q ss_pred eccCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 005902 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (671)
Q Consensus 124 n~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~ 156 (671)
. +.+.+.|.|.|.+|+..|++||+.|+.++
T Consensus 74 ~---~~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 103 (114)
T 2da0_A 74 S---HNRTYHFQAEDEQDYVAWISVLTNSKEEA 103 (114)
T ss_dssp E---TTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred c---CCcEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 4 47789999999999999999999999854
No 21
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.10 E-value=7.1e-10 Score=97.53 Aligned_cols=101 Identities=11% Similarity=0.186 Sum_probs=72.4
Q ss_pred CcCCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEE
Q 005902 41 KEKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVM 120 (671)
Q Consensus 41 ~~~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~ 120 (671)
...+.+.++|||++-|. ....| ++|||||++..|.|||.+.. ..|...+.+..++.|... .+. +.=|+|
T Consensus 3 ~~~~~~~~~G~L~K~~~--~~~~W-k~RwfvL~~~~L~yyk~~~~----~~~~~~i~L~~~~~~~~~-~~~---~~~~~F 71 (109)
T 1wgq_A 3 SGSSGSTMSGYLYRSKG--SKKPW-KHLWFVIKNKVLYTYAASED----VAALESQPLLGFTVTLVK-DEN---SESKVF 71 (109)
T ss_dssp SCCCSCSCEEEEEEESS--TTSCC-EEEEEEEETTEEEEESCTTC----SSCSEEEECSSEEEEECC-CSS---CSSSEE
T ss_pred CCCCCCeEEEEEEeCCC--CCCCc-eeEEEEEeCCEEEEECCCCc----CccCceEECCCCEEEECC-CCC---CCCcEE
Confidence 34466779999999653 23466 99999999999999996543 346666666666555432 111 112577
Q ss_pred EEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 121 ~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.|... ..+.+.|.|.|.+|+..|++||+.|+.
T Consensus 72 ~i~~~--~~~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 72 QLLHK--GMVFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp EEEET--TEEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred EEEeC--CCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 77642 235589999999999999999999965
No 22
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=7.7e-10 Score=99.53 Aligned_cols=98 Identities=9% Similarity=0.178 Sum_probs=74.6
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCc--eeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK--YVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMR 121 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~--~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~ 121 (671)
..+.++|||++-|...+-..| ++|||||++. .|.|||.+.. ..|...+.+...+.|.+..- .-+.|.
T Consensus 6 ~~~~~~G~L~K~g~~~~~k~W-kkRwfvL~~~~~~L~Yy~~~~~----~~~~g~I~L~~~~~~~~~~~------~~~~F~ 74 (119)
T 2dhk_A 6 SGKKLCGYLSKFGGKGPIRGW-KSRWFFYDERKCQLYYSRTAQD----ANPLDSIDLSSAVFDCKADA------EEGIFE 74 (119)
T ss_dssp SCCCCEEEEEECSCSSSSCCC-EEEEEEEETTTTEEEEESSTTC----CSCSEEEEGGGCEEEECTTG------GGCEEE
T ss_pred CCCcEEEEEEecCCCCCCCCc-eeEEEEEECCccEEEEECCCCC----cccccEEECCCCEEEecCCC------CCCEEE
Confidence 556799999998764455677 8999999999 9999996653 35556666666666654211 124777
Q ss_pred EEeccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 122 LYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 122 ~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
|... .+.+.|.|.|.+|+..|++||+.|+.+
T Consensus 75 i~~~---~r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (119)
T 2dhk_A 75 IKTP---SRVITLKAATKQAMLYWLQQLQMKRWE 105 (119)
T ss_dssp EECS---SCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEeC---CcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 7654 678899999999999999999999873
No 23
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=6.7e-10 Score=97.95 Aligned_cols=101 Identities=13% Similarity=0.216 Sum_probs=74.8
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEE
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~ 122 (671)
.+.+.++|||++-|. ....| ++|||||.+..|.|||.+.. ..|...+.+...|.|+...-. .+.-+.|.|
T Consensus 5 ~~~~~~~G~L~K~~~--~~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~~~v~~~~~~---~~~~~~F~i 74 (115)
T 2dn6_A 5 SSGVLKQGYMMKKGH--RRKNW-TERWFVLKPNIISYYVSEDL----KDKKGDILLDENCCVESLPDK---DGKKCLFLV 74 (115)
T ss_dssp CCSCSEEEEEEEECT--TSSCE-EEEEEEECSSCEEEESSTTC----SSEEEEECCCTTCEEEEECCC---TTCCSEEEE
T ss_pred CCCceEEEEEEecCC--CCCCc-EEeEEEEECCEEEEeCCCCC----cccCcEEEecCcEEEEECCCC---CCCeeEEEE
Confidence 356679999999764 33455 99999999999999996432 456667777777777643211 112256777
Q ss_pred EeccCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 005902 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (671)
Q Consensus 123 yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~ 156 (671)
... .+.+.|.|.|.+|+..|+++|+.|+.+.
T Consensus 75 ~~~---~r~~~l~a~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 75 KCF---DKTFEISASDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp ECS---SCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EeC---CCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 543 5779999999999999999999999843
No 24
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.09 E-value=4.2e-10 Score=100.67 Aligned_cols=102 Identities=13% Similarity=0.212 Sum_probs=74.0
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEE
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~ 122 (671)
...+.++|||++-|. ....| ++|||||.+..|.|||.+.. ..|...+.+.....|+...-+.. ...-|.|.|
T Consensus 11 ~~~~~~~G~L~K~g~--~~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~l~~~~~v~~~~~~~~-~~~~~~F~i 82 (125)
T 1eaz_A 11 DSAVIKAGYCVKQGA--VMKNW-KRRYFQLDENTIGYFKSELE----KEPLRVIPLKEVHKVQECKQSDI-MMRDNLFEI 82 (125)
T ss_dssp -CCCSEEEEEEEECT--TTCCE-EEEEEEECSSEEEEESSTTC----SSCSEEEEGGGCCEEEECTTHHH-HTCSSEEEE
T ss_pred CCCccEEEEEEEeCC--CCCCc-ceEEEEEeCCEEEEEcCCCC----CcceeEEEcccceEEeecccccc-CCcCCEEEE
Confidence 356679999999764 33456 99999999999999997643 45666666666666654211111 122356777
Q ss_pred EeccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 123 yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
.. ..+.+.|.|.|.+|+..|+++|+.|+..
T Consensus 83 ~~---~~r~~~l~a~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 83 VT---TSRTFYVQADSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp EC---SSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred Ee---CCcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 64 3678999999999999999999999983
No 25
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.08 E-value=4.9e-10 Score=103.72 Aligned_cols=99 Identities=14% Similarity=0.166 Sum_probs=71.5
Q ss_pred cceeeeEEEEEccccccccceeeeeEEEeCceeeeec----cCCCCCCCCccceeeeecCcceeecc--cceeeeCceEE
Q 005902 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYK----RDPHENPGIKPIRRGVIGPTLMVEEL--GRRRFNHGDVY 118 (671)
Q Consensus 45 ~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK----~~p~~~~~~~pir~~~i~~~~~v~d~--Gr~~~~~~~~y 118 (671)
...++||||.-|.+.+ ..| ++|||||.++.|.||| ++.... |+ ..|...+|.|+.. --+...++ |
T Consensus 7 n~~~~G~L~KqG~~~~-K~W-KrRwFVL~~~~LyYfk~~~~~~~~~~----p~-G~I~L~g~tV~~~~~~~~~~~~k--~ 77 (126)
T 1wi1_A 7 GMKHSGYLWAIGKNVW-KRW-KKRFFVLVQVSQYTFAMCSYREKKAE----PQ-ELLQLDGYTVDYTDPQPGLEGGR--A 77 (126)
T ss_dssp CEEEEEEEEEECSSSC-CSC-EEEEEEEEEEETTEEEEEECCSSSSC----CS-EEEECSSCEEEECCCCSSCCSCS--S
T ss_pred CCceeEEEEEeCCCcc-ccc-ceEEEEEeCCEEEEEEcccccccCCC----Cc-eEEECCCcEEEEecCCcccccCc--e
Confidence 4579999999987644 688 8899999999999999 666444 43 3344444666521 11122233 5
Q ss_pred EEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 119 VMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 119 v~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
.|.+.. +.+.+-|+|.|.||...||.||..|+-|
T Consensus 78 ~F~~v~---~~~ty~~~Adseee~~~WikAi~~A~~~ 111 (126)
T 1wi1_A 78 FFNAVK---EGDTVIFASDDEQDRILWVQAMYRATGQ 111 (126)
T ss_dssp EEEEEC---SSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EEEEec---CCceEEEEcCCHHHHHHHHHHHHHHhcc
Confidence 676664 3456999999999999999999999763
No 26
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.06 E-value=9.1e-10 Score=98.38 Aligned_cols=100 Identities=16% Similarity=0.311 Sum_probs=71.5
Q ss_pred cceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEEe
Q 005902 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYN 124 (671)
Q Consensus 45 ~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~yn 124 (671)
.+.++|||++-|.+.+ ..| ++|||||.+..|.|||.+.... |...+. ..+|.|+........ +.-|.|.|..
T Consensus 10 ~~~~~G~L~K~~~~~~-~~W-kkR~fvL~~~~L~yy~~~~~~~----~~g~i~-l~~~~v~~~~~~~~~-~~~~~f~i~~ 81 (123)
T 1upq_A 10 PVHIRGWLHKQDSSGL-RLW-KRRWFVLSGHCLFYYKDSREES----VLGSVL-LPSYNIRPDGPGAPR-GRRFTFTAEH 81 (123)
T ss_dssp CEEEEEEEEEECSSSS-CCE-EEEEEEEETTEEEEESSTTCCS----CCEEEE-GGGCEEEECCSSCTT-SSSSEEEEEC
T ss_pred CceEEEEEEeeCCCCC-CCc-eeEEEEEeCCEEEEECCCCCcc----cceEEE-CCCCEEEECCCCccC-CCcEEEEEEC
Confidence 3669999999875443 355 9999999999999999765433 333333 344566654332222 2246777765
Q ss_pred ccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 125 RLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 125 ~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
. ..+.+.|.|.|.+|+..|++||+.|+.
T Consensus 82 ~--~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 82 P--GMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp T--TSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred C--CCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 3 247789999999999999999999987
No 27
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.06 E-value=1e-09 Score=98.19 Aligned_cols=99 Identities=14% Similarity=0.266 Sum_probs=72.3
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~y 123 (671)
..+.++|||++-|.. ...| ++|||||++..|.|||.+.. ..|...+.+.. |.|.+.. ..+.-+.|.|.
T Consensus 3 ~~~~~~G~L~K~g~~--~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~-~~v~~~~----~~~~~~~f~i~ 70 (127)
T 1fgy_A 3 FNPDREGWLLKLGGR--VKTW-KRRWFILTDNCLYYFEYTTD----KEPRGIIPLEN-LSIREVL----DPRKPNCFELY 70 (127)
T ss_dssp SSCSEEEEEEEECSS--SCCE-EEEEEEEETTEEEEESSTTC----SSCSEEEECTT-CEEEEEC----CSSCSSEEEEE
T ss_pred CCCceEeEEEEECCC--CCCe-EEEEEEEECCEEEEeCCCCC----CCcceEEECCc-eEEEEcc----CCCCCceEEEe
Confidence 356799999998754 3456 89999999999999996543 34544555544 3444322 22344678888
Q ss_pred eccCc-------------------CcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 124 NRLDE-------------------SKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 124 n~~~~-------------------~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
++... .+.+.|.|.|.+|+..|++||++|+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 71 NPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp CSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 76432 46789999999999999999999987
No 28
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.06 E-value=7.9e-10 Score=102.87 Aligned_cols=109 Identities=11% Similarity=0.136 Sum_probs=76.6
Q ss_pred ccCCcCCcceeeeEEEEEcccc--ccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCc
Q 005902 38 VGDKEKGYFEYFGWVYHMGTNS--IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHG 115 (671)
Q Consensus 38 ~~~~~~~~~~~~Gw~y~~g~~~--~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~ 115 (671)
+++..-..+.++|||++-|... ++..| ++|||||++..|.|||.... ..|...+.+..++.+...+. ...++
T Consensus 9 ~~~~~~~~~~~~G~L~K~g~~~~~~~k~W-kkR~fvL~~~~L~yyk~~~~----~~~~g~i~L~~~~v~~~~~~-~~~~~ 82 (148)
T 1u5f_A 9 IPAQDLPFVIKAGYLEKRRKDHSFLGFEW-QKRWCALSKTVFYYYGSDKD----KQQKGEFAIDGYDVRMNNTL-RKDGK 82 (148)
T ss_dssp CCGGGCSSEEEEEEEEEECCCSSCSSCSE-EEEEEEEETTEEEEESSTTC----SSCSEEEECTTCEEEECTTS-CSSTT
T ss_pred CChhhCCCccEEEEEEEeCCCCCCcCCCc-eeEEEEEECCEEEEEcCCCC----cccceEEEcCCcEEEECCCc-ccCCC
Confidence 3344446778999999988643 55677 99999999999999987543 34555555555543321111 01112
Q ss_pred eEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.-|.|.|.... .+.+.|.|.|.+|+..|++||+.|+.
T Consensus 83 ~~~~F~I~~~~--~r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 83 KDCCFEICAPD--KRIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp GGGEEEEECTT--SCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CccEEEEECCC--CcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 22678887642 47889999999999999999999977
No 29
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.05 E-value=1.1e-09 Score=97.17 Aligned_cols=94 Identities=11% Similarity=0.160 Sum_probs=72.6
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~y 123 (671)
+.+.++|||++-|.. ....| ++|||||.+..|.|||.+.. ..|...+.+...+.|+..+ . +.|.|.
T Consensus 6 ~~~~~~G~L~K~~~~-~~~~W-kkR~fvL~~~~L~yy~~~~~----~~~~g~i~l~~~~~v~~~~-----~---~~F~i~ 71 (115)
T 2cod_A 6 SGKVKSGWLDKLSPQ-GKRMF-QKRWVKFDGLSISYYNNEKE----MYSKGIIPLSAISTVRVQG-----D---NKFEVV 71 (115)
T ss_dssp SCCCEEEEEEECCSS-SSSCC-EEEEEEECSSEEEEEESSCC----SSCCCEEETTTEEEEEEET-----T---TEEEEE
T ss_pred CCccEEEEEEEcCCC-CCCCC-ceEEEEEECCEEEEEcCCCC----cccCCEEECCcceEEEeCC-----C---CEEEEE
Confidence 456799999996642 23355 99999999999999997553 3455666666666777554 1 466776
Q ss_pred eccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 124 n~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
...+.+.|.|.|.+|+..|+++|++|+.
T Consensus 72 ---~~~r~~~l~a~s~~e~~~Wi~~l~~~~~ 99 (115)
T 2cod_A 72 ---TTQRTFVFRVEKEEERNDWISILLNALK 99 (115)
T ss_dssp ---ESSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ---eCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 3478899999999999999999999986
No 30
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.05 E-value=3.3e-10 Score=100.23 Aligned_cols=102 Identities=10% Similarity=0.166 Sum_probs=72.2
Q ss_pred cCCcceeeeEEEEEccccccccceeeeeEEEe--CceeeeeccCCCCCCCCccceeeeecCcceeec----ccceeeeCc
Q 005902 42 EKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIR--GKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEE----LGRRRFNHG 115 (671)
Q Consensus 42 ~~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~--~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d----~Gr~~~~~~ 115 (671)
..+.+.++|||++.|.. ...| ++|||||. +..|.|||.+... .|...+.+..++.|+. .|+.... .
T Consensus 4 ~~~~~~~~G~L~K~g~~--~~~W-k~R~fvL~~~~~~L~yy~~~~~~----~~~g~i~L~~~~~v~~~~~~~~~~~~~-~ 75 (117)
T 1v5u_A 4 GSSGRSYEGILYKKGAF--MKPW-KARWFVLDKTKHQLRYYDHRMDT----ECKGVIDLAEVEAVAPGTPTIGAPKTV-D 75 (117)
T ss_dssp SCCSSSEEEEEEECCCS--SSCC-EEEEEEEETTTTEEEEESSSSCS----SCCCEEEGGGEEEEECCCCCTTSCSSS-C
T ss_pred CcCCccEEEEEEecCCC--CCCc-eeeEEEEECCCCEEEEeecCCCC----ccceEEEccCcEEEeecCccccccccC-C
Confidence 34567799999997653 3456 99999999 8899999966433 3555555666665552 1221111 1
Q ss_pred eEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.-|+|.|.. ..+.+.|.|.|.+|+..|++||+.|+.
T Consensus 76 ~~~~F~i~~---~~r~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 76 EKAFFDVKT---TRRVYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp TTTCEEEEE---SSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred CCeEEEEEC---CCceEEEECCCHHHHHHHHHHHHHHhc
Confidence 125667743 467899999999999999999999976
No 31
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=1e-09 Score=96.99 Aligned_cols=101 Identities=11% Similarity=0.209 Sum_probs=69.6
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~y 123 (671)
..+.++|||++.|.+. ...| ++|||||++..|.|||.+... .|...+.+..++ |......... ..-|.|.|.
T Consensus 9 ~~~~~~G~L~K~~~~~-~~~W-k~R~fvL~~~~L~yy~~~~~~----~~~g~i~L~~~~-v~~~~~~~~~-~~~~~F~i~ 80 (117)
T 2d9y_A 9 APVTKAGWLFKQASSG-VKQW-NKRWFVLVDRCLFYYKDEKEE----SILGSIPLLSFR-VAAVQPSDNI-SRKHTFKAE 80 (117)
T ss_dssp CCCCEEEEEEEECTTS-SSCE-EEEEEEEETTEEEEESSTTCC----SCCEEEECSSCE-EEECCTTTTC-CCSSEEEEE
T ss_pred CCeeEEEEEEEeCCCC-CCCc-eEEEEEECCCEEEEECCCCCC----CcCCEEEeCCeE-EEEcCccccC-CCccEEEEE
Confidence 3567999999987433 3456 999999999999999965433 444444444433 4322211111 112577775
Q ss_pred eccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 124 n~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.. ..+.+.|.|.|.+|+..|++||++|+.
T Consensus 81 ~~--~~r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 81 HA--GVRTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp CS--SSCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred cC--CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 43 357799999999999999999999976
No 32
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.05 E-value=7.8e-10 Score=99.57 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=74.7
Q ss_pred cCCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEE
Q 005902 42 EKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMR 121 (671)
Q Consensus 42 ~~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~ 121 (671)
....+.++|||++-|. ....| ++|||||.+..|.|||.+.. ..|...+.+..+..|+... ..+.-|.|.
T Consensus 14 ~~~~~~~~G~L~K~g~--~~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~~~v~~~~----~~~~~~~F~ 82 (126)
T 1fao_A 14 APSLGTKEGYLTKQGG--LVKTW-KTRWFTLHRNELKYFKDQMS----PEPIRILDLTECSAVQFDY----SQERVNCFC 82 (126)
T ss_dssp -CCTTCEEEEEEEECS--SSCCE-EEEEEEEETTEEEEESSTTC----SSCSEEEEGGGCCEEEEEC----SSSSSSEEE
T ss_pred CCCCccEEEEEEEcCC--CCCCc-ccEEEEEECCEEEEeCCCCC----CCceeEEEccceEEEEecc----cCCCCCEEE
Confidence 3456779999999763 34455 99999999999999995543 4566666666666565321 122235677
Q ss_pred EEeccCcCcceeeeccCHHHHHHHHHHHHHHHHHHHHHH
Q 005902 122 LYNRLDESKKGEIACATAGEARKWMEAFDQAKQQAEVEL 160 (671)
Q Consensus 122 ~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~~~~~ 160 (671)
|.. ..+.+.|.|.|.+|+..|++||+.|+.+.+.++
T Consensus 83 i~~---~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~~~ 118 (126)
T 1fao_A 83 LVF---PFRTFYLCAKTGVEADEWIKILRWKLSQIRKQL 118 (126)
T ss_dssp EEE---TTEEEEEECSSHHHHHHHHHHHHHHHHTC----
T ss_pred EEe---CCcEEEEECCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 775 367899999999999999999999999544443
No 33
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.02 E-value=8.7e-10 Score=100.14 Aligned_cols=108 Identities=19% Similarity=0.219 Sum_probs=70.5
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcc--eeecccceeeeCceEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTL--MVEELGRRRFNHGDVYVMR 121 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~--~v~d~Gr~~~~~~~~yv~~ 121 (671)
+.+.++|||++.+....-..| ++|||||++..|.|||...... ...|+..+.+..+. .|+...++...+ -|.|.
T Consensus 3 ~~v~~~G~L~K~~~~~~~~~W-krRwfvL~~~~L~yyk~~~d~~-~~~p~g~I~L~~~~~~~v~~~~~~~~~~--~~~F~ 78 (134)
T 2y7b_A 3 SSVEERGFLTIFEDVSGFGAW-HRRWCVLSGNCISYWTYPDDEK-RKNPIGRINLANCTSRQIEPANREFCAR--RNTFE 78 (134)
T ss_dssp CCCCEEEEEEEEEEETTEEEE-EEEEEEEETTEEEEESSHHHHT-TSCCSEEEEGGGBCSSSCEECCTTTCCC--TTEEE
T ss_pred CCceEEeeEEEEcCCCCCCCc-EEEEEEEECCEEEEECCCCccc-ccCceEEEEhhhCccccccccchhhccC--CCEEE
Confidence 456799999997222222355 9999999999999999543322 34555555444433 154433221112 25677
Q ss_pred EEec--cCc---------------CcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 122 LYNR--LDE---------------SKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 122 ~yn~--~~~---------------~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
|+.. ... .+.+.|.|.|.+|+..||+||++|+..
T Consensus 79 i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 79 LITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 7653 211 135899999999999999999999883
No 34
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.01 E-value=9.9e-10 Score=95.46 Aligned_cols=93 Identities=12% Similarity=0.156 Sum_probs=64.9
Q ss_pred eeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEEeccC
Q 005902 48 YFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYNRLD 127 (671)
Q Consensus 48 ~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~yn~~~ 127 (671)
|||||++.|. ....| ++|||||++..|.|||.+.... ..|...+.+ .+|.|+...-+ . +.|.|..+
T Consensus 1 ~eG~L~K~g~--~~k~W-k~R~fvL~~~~L~Yy~~~~~~~--~~~~g~i~L-~~~~v~~~~~~---~---~~F~i~~~-- 66 (103)
T 3rcp_A 1 MEGVLYKWTN--YLTGW-QPRWFVLDNGILSYYDSQDDVC--KGSKGSIKM-AVCEIKVHSAD---N---TRMELIIP-- 66 (103)
T ss_dssp CEEEEEEECC--TTTCE-EEEEEEEETTEEEEESSCC-----CCCSCEEEG-GGCEEECCTTC---S---SEEEEEET--
T ss_pred CceEEEEccC--CCCCe-eceEEEEECCEEEEEecCCccc--CCcccEEEe-eeeEEEEcCCC---C---ceEEEEeC--
Confidence 7999999774 34566 9999999999999999765322 234333333 45666432211 1 24666543
Q ss_pred cCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 128 ESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 128 ~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
..+.+.|.|.|.+|+..|++||+.|+.
T Consensus 67 ~~r~~~l~a~s~~e~~~Wi~al~~a~~ 93 (103)
T 3rcp_A 67 GEQHFYMKAVNAAERQRWLVALGSSKA 93 (103)
T ss_dssp TTEEEEEECSSHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999965
No 35
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.00 E-value=2.3e-09 Score=93.64 Aligned_cols=100 Identities=15% Similarity=0.241 Sum_probs=68.7
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCc--eeeeeccCCCCCCCCccceeeeecCcceeeccccee--eeCceEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK--YVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRR--FNHGDVYV 119 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~--~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~--~~~~~~yv 119 (671)
..+.++|||++-|. ...+| ++|||||.+. .|.|||.... ..|...+.+.+ |.|....... ...+.-++
T Consensus 5 ~~~~~~G~L~K~g~--~~~~W-k~R~fvL~~~~~~L~yyk~~~~----~~~~g~i~L~~-~~v~~~~~~~~~~~~~~~~~ 76 (109)
T 2i5f_A 5 GVIIKQGCLLKQGH--RRKNW-KVRKFILREDPAYLHYYDPAGA----EDPLGAIHLRG-CVVTSVESNSNGRKSEEENL 76 (109)
T ss_dssp CCEEEEEEEEEECT--TTCCE-EEEEEEEETTTTEEEEECTTSC----SSCSEEEECTT-CEEEEECC--------CCSE
T ss_pred CceeEEEEEEEcCC--CCCCc-eEEEEEEeCCCcEEEEECCCCC----CCccEEEECCC-CEEEEccCCcccccCCCceE
Confidence 45679999999764 33456 9999999987 9999986532 44555555555 4454322210 01123467
Q ss_pred EEEEeccCcCcceeeeccCHHHHHHHHHHHHHHH
Q 005902 120 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAK 153 (671)
Q Consensus 120 ~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~ 153 (671)
|.|..+. .+.+.|.|.|.+|+..|++||+.|+
T Consensus 77 F~i~~~~--~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 77 FEIITAD--EVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp EEEECTT--CCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEeCC--CCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 7787652 3458999999999999999999986
No 36
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.00 E-value=2.5e-09 Score=94.46 Aligned_cols=100 Identities=11% Similarity=0.149 Sum_probs=72.9
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~y 123 (671)
+.+.++|||++-|. .-..| ++|||||++..|.|||.+.. ..|...+.+..++.|+... -..+.-|.|.|.
T Consensus 3 ~~~~~~G~L~K~g~--~~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~~~~~~~~---~~~~~~~~F~i~ 72 (113)
T 1pls_A 3 PKRIREGYLVKKGS--VFNTW-KPMWVVLLEDGIEFYKKKSD----NSPKGMIPLKGSTLTSPCQ---DFGKRMFVFKIT 72 (113)
T ss_dssp CCCSEEEEEEEESS--SSSCC-EEEEEEEETTEEEEESSTTC----SSCSEEEESSSCCEESSCC---SSCCSSSEEEEE
T ss_pred CCCcEEEEEEEeCC--CCCCc-eEEEEEEECCEEEEEeCCCC----CCcceEEEcCCCEEEEecC---CCCCCccEEEEE
Confidence 45679999999764 23456 99999999999999997642 4566666666666554110 112234577776
Q ss_pred eccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 124 n~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
... .+.+.|.|.|.+|+..|+++|++|+..
T Consensus 73 ~~~--~r~~~l~a~s~~e~~~Wi~ai~~~~~~ 102 (113)
T 1pls_A 73 TTK--QQDHFFQAAFLEERDAWVRDINKAIKC 102 (113)
T ss_dssp ETT--TEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCC--CCEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 543 467889999999999999999999883
No 37
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=98.99 E-value=5.7e-10 Score=98.46 Aligned_cols=104 Identities=11% Similarity=0.197 Sum_probs=69.0
Q ss_pred cceeeeEEEEEccccccccceeeeeEEE-eCceeeeeccCCCCCC-CCccceeeeec--CcceeecccceeeeCceEEEE
Q 005902 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFI-RGKYVEMYKRDPHENP-GIKPIRRGVIG--PTLMVEELGRRRFNHGDVYVM 120 (671)
Q Consensus 45 ~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl-~~~~l~~yK~~p~~~~-~~~pir~~~i~--~~~~v~d~Gr~~~~~~~~yv~ 120 (671)
.+.++|||++-|. .-..| ++||||| .+..|.|||.+....| +.+||..+.|+ ..+.|++.-...... .=|.|
T Consensus 4 ~~~~~G~L~K~g~--~~k~W-kkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~-~~~~F 79 (112)
T 3aj4_A 4 AFVKSGWLLRQST--ILKRW-KKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKS-KDCML 79 (112)
T ss_dssp SCSEEEEEEEECS--SSCCE-EEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCC-GGGEE
T ss_pred ceeEEEEEEeeCC--CCCCe-eceEEEEeeCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCC-cCcEE
Confidence 4569999999765 33456 9999999 9999999997765443 24555554433 111222100000011 12467
Q ss_pred EEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 121 ~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.|..+ ..+.+.|.|.|.+|+..|++||++|+.
T Consensus 80 ~i~~~--~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 80 QIVCR--DGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp EEEET--TSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEec--CCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 77643 367889999999999999999999953
No 38
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.99 E-value=9.5e-10 Score=96.84 Aligned_cols=96 Identities=9% Similarity=0.189 Sum_probs=67.1
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~y 123 (671)
..+.++|||++. ....| ++|||||+++.|.|||.+.. . ..|+-.+.+ .+|.|+..- ..+.=|+|.|.
T Consensus 6 ~~~~~~G~L~K~----~~k~W-k~RwfvL~~~~L~yyk~~~~-~--~~~~~~i~l-~~~~v~~~~----~~~~~~~F~i~ 72 (107)
T 2cof_A 6 SGLETSSYLNVL----VNSQW-KSRWCSVRDNHLHFYQDRNR-S--KVAQQPLSL-VGCEVVPDP----SPDHLYSFRIL 72 (107)
T ss_dssp CCCTTCCEEEEE----ETTEE-EEEEEEECSSCEEEECSSTT-C--SEEEEEECT-TTCEEECCC----BTTBSCEEEEE
T ss_pred CCCcEeEEEEEe----cCCCc-ceEEEEEECCEEEEEeCCcc-c--CCCeeEEec-cceEEEECC----CCCCCeEEEEE
Confidence 456799999996 34456 99999999999999997654 2 233222222 345454211 12233678887
Q ss_pred eccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 124 n~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
... .+.+.|.|.|.+|+..||+||+.|+.
T Consensus 73 ~~~--~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 73 HKG--EELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp ETT--EEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred eCC--CeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 632 56689999999999999999999844
No 39
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.99 E-value=1.7e-09 Score=100.55 Aligned_cols=100 Identities=18% Similarity=0.291 Sum_probs=73.8
Q ss_pred CcceeeeEEEEEcccc----ccccceeeeeEEEeCc-----eeeeeccCCCCCCCCccceeeeecCcceeecccceeeeC
Q 005902 44 GYFEYFGWVYHMGTNS----IGHEYCHLRFLFIRGK-----YVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNH 114 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~----~g~~~~~~Ryfvl~~~-----~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~ 114 (671)
..+.++|||++-|.++ .-..| ++|||||++. .|.|||.++.+ ..|...+.+..+..|... ..
T Consensus 16 ~~~~~~G~L~K~~~~~~~~~~~k~W-k~RwfvL~~~~~g~~~L~yy~~~~~~---~~~~g~I~L~~~~~~~~~-----~~ 86 (150)
T 1wg7_A 16 GGITKHGWLYKGNMNSAISVTMRSF-KRRFFHLIQLGDGSYNLNFYKDEKIS---KEPKGSIFLDSCMGVVQN-----NK 86 (150)
T ss_dssp CCCCCEEEEEECCCCSSHHHHHSSC-EEEEEEEEECSSSCEEEEEESSSCCS---SCCSEEECTTTCCEECCC-----CS
T ss_pred CCeeEEEEEEEecCCccccccccCe-eEEEEEEecCCCCceEEEEECCCCCC---CCcCcEEecccCEEEecC-----CC
Confidence 5677999999987553 23456 9999999997 99999987632 345556666665544321 12
Q ss_pred ceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 115 GDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 115 ~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
+.-|+|.|..+. .+.+.|.|.|.+|+..|+.||+.|+.
T Consensus 87 ~~~~~F~i~~~~--~r~~~l~A~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 87 VRRFAFELKMQD--KSSYLLAADSEVEMEEWITILNKILQ 124 (150)
T ss_dssp SCTTEEEEECSS--SCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCC--CcEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 334678887653 36899999999999999999999998
No 40
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.97 E-value=2.2e-09 Score=97.12 Aligned_cols=99 Identities=11% Similarity=0.053 Sum_probs=72.1
Q ss_pred CcCCcceeeeEEEEEccccccccceeeeeEEEeCc---eeeeeccCCCCCCCCccceeeeecCcceee--cccceeeeCc
Q 005902 41 KEKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK---YVEMYKRDPHENPGIKPIRRGVIGPTLMVE--ELGRRRFNHG 115 (671)
Q Consensus 41 ~~~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~---~l~~yK~~p~~~~~~~pir~~~i~~~~~v~--d~Gr~~~~~~ 115 (671)
..+....+.|||++.+. +.+| ++|+|||+++ +|.|||..-+ ..|+.++.+. +|.|. +.+.+.-
T Consensus 3 ~~~~~~~~~G~L~k~~~---~~~W-kkrWfVL~~~~~~~Ly~Yk~~~d----~~p~g~I~L~-g~~V~~~~~~~~~~--- 70 (112)
T 2coc_A 3 SGSSGSLLCGPLRLSES---GETW-SEVWAAIPMSDPQVLHLQGGSQD----GRLPRTIPLP-SCKLSVPDPEERLD--- 70 (112)
T ss_dssp SCCSSSSSEEEEEEESS---SSCE-EEEEEECCTTCTTCEEEECCTTC----SSSCSEECGG-GCEEECCCSSSCCS---
T ss_pred cccCCceEEEEEEecCC---CCCc-eEEEEEEECCCccEEEEECCCCc----cCcceEEEcC-CCEEEecCcccccC---
Confidence 34455668899999543 7888 9999999985 7999995543 3466555444 45666 3433321
Q ss_pred eEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.=|+|.|... .+...|+|.|.|++.+||++|+.|+.
T Consensus 71 ~~~~Fki~~~---~~~y~f~A~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 71 SGHVWKLQWA---KQSWYLSASSAELQQQWLETLSTAAH 106 (112)
T ss_dssp SSEEEEEEET---TEEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecC---CeEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 3478999843 45689999999999999999999865
No 41
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=98.95 E-value=4.6e-09 Score=94.90 Aligned_cols=102 Identities=15% Similarity=0.250 Sum_probs=71.2
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCc--eeeeeccCCCCCCCCccceeeeecCcceeeccccee--eeCceEE
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK--YVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRR--FNHGDVY 118 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~--~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~--~~~~~~y 118 (671)
...+.++|||++-|. ....| ++|||||.+. .|.|||.+.. ..|...+.+.. |.|....... ...+.-|
T Consensus 15 ~~~~~~~G~L~K~g~--~~~~W-k~R~fvL~~~~~~L~yy~~~~~----~~~~g~i~L~~-~~v~~~~~~~~~~~~~~~~ 86 (129)
T 1x05_A 15 RGVIIKQGCLLKQGH--RRKNW-KVRKFILREDPAYLHYYDPAGA----EDPLGAIHLRG-CVVTSVESNSNGRKSEEEN 86 (129)
T ss_dssp CSEEEEEEEEEECCS--SCCCC-EEEEEEEEETTTEEEEECSSCC----SSCSEEEECTT-CEEEECCCCCCSSSCSSCS
T ss_pred cCCceEEEEEEecCC--CCCCC-eeEEEEEeCCCCEEEEECCCCC----CcceeEEEccC-CEEEEccCCccccccCCCe
Confidence 456779999999654 34456 9999999986 8999996532 44555555555 4554322211 0112346
Q ss_pred EEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 119 VMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 119 v~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.|.|.... .+.+.|.|.|.+|+..|++||+.|+.
T Consensus 87 ~F~i~~~~--~~~~~l~a~s~~e~~~Wi~al~~~~~ 120 (129)
T 1x05_A 87 LFEIITAD--EVHYFLQAATPKERTEWIKAIQMASR 120 (129)
T ss_dssp EEEEECTT--CCCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCC--CCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 77887652 34589999999999999999999987
No 42
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.94 E-value=8.6e-09 Score=97.75 Aligned_cols=96 Identities=10% Similarity=0.134 Sum_probs=69.7
Q ss_pred cceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecc-cceeeeCceEEEEEEE
Q 005902 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEEL-GRRRFNHGDVYVMRLY 123 (671)
Q Consensus 45 ~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~-Gr~~~~~~~~yv~~~y 123 (671)
.+.++|||++-|. .+ ..| ++|||||+++.|.|||.+.... |...+.+..++.|.+. -.+. .=+.|+|.
T Consensus 17 pv~keG~L~Kkg~-~~-k~W-krRWFvLk~~~L~Yyk~~~d~~----~~g~I~L~~~~~~~~~~~~~~----~~~~F~I~ 85 (149)
T 1x1f_A 17 PLYFEGFLLIKRS-GY-REY-EHYWTELRGTTLFFYTDKKSII----YVDKLDIVDLTCLTEQNSTEK----NCAKFTLV 85 (149)
T ss_dssp CEEEEEEEEEECT-TC-CSC-EEEEEEEETTEEEEESCSSCSS----CSEECCCSSCCEEEECCCTTS----CCCEEEEE
T ss_pred CccEEEEEEEeCC-CC-CCc-eeEEEEEcCCEEEEEeCCCccc----cCcEEECCCceEEeeccCCCC----cCcEEEEE
Confidence 3779999999874 22 677 9999999999999999775444 3344444455545322 1111 12577776
Q ss_pred eccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 124 n~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
. ..+.+.|.|.|.||+..||.||+.++.
T Consensus 86 t---~~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 86 L---PKEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp C---SSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred c---CCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 4 356789999999999999999999877
No 43
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=98.94 E-value=9.1e-10 Score=95.69 Aligned_cols=99 Identities=14% Similarity=0.182 Sum_probs=62.1
Q ss_pred eeeEEEEEcc------ccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecC-cceeecccceeeeCceEEEE
Q 005902 48 YFGWVYHMGT------NSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGP-TLMVEELGRRRFNHGDVYVM 120 (671)
Q Consensus 48 ~~Gw~y~~g~------~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~-~~~v~d~Gr~~~~~~~~yv~ 120 (671)
|||||++-+. .....+| ++|||||++..|.|||.+....++..+...+.|+- +|.|+-. . ...+.=|+|
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~W-k~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~-~--~~~~~~~~F 76 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSW-HNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVA-L--DYKKKKHVF 76 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCC-EEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEEC-S--SCCSSSSEE
T ss_pred CccEEEEEEEEeCCCccCCCCCh-hEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEc-c--cccCCccEE
Confidence 7999999872 1344566 99999999999999996542100011111222222 2222210 0 011122688
Q ss_pred EEEeccCcCcceeeeccCHHHHHHHHHHHHHH
Q 005902 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQA 152 (671)
Q Consensus 121 ~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a 152 (671)
+|... ..+.+-|.|.|.+|+..|++||+.|
T Consensus 77 ~i~~~--~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 77 KLRLS--DGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp EEECT--TSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred EEEec--CCCEEEEECCCHHHHHHHHHHHhcC
Confidence 88742 3478999999999999999999875
No 44
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=98.93 E-value=4.3e-09 Score=104.90 Aligned_cols=109 Identities=11% Similarity=0.173 Sum_probs=77.2
Q ss_pred ccCCcCCcceeeeEEEEEcccc--ccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCc
Q 005902 38 VGDKEKGYFEYFGWVYHMGTNS--IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHG 115 (671)
Q Consensus 38 ~~~~~~~~~~~~Gw~y~~g~~~--~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~ 115 (671)
+++..-..+.++|||++-|... +...| ++|||||++..|.|||..... .|...+.+..++.|...-.. ..++
T Consensus 98 ~~~~~l~~v~k~G~L~Kkg~~~~~~~k~W-kkRwfVL~~~~L~Yyk~~~~~----~p~g~I~L~~~~~v~~~~~~-~~~~ 171 (211)
T 1u5e_A 98 IAAQDLPFVIKAGYLEKRRKDHSFLGFEW-QKRWCALSKTVFYYYGSDKDK----QQKGEFAIDGYDVRMNNTLR-KDGK 171 (211)
T ss_dssp CCGGGCSSEEEEEEEEEEEHHHHTTTCCC-EEEEEEEETTEEEEESSTTCS----SCSEEEECTTCEEEECGGGC-SSTT
T ss_pred cChhhcCCccEEEEEEEECCCCCcCCCCc-EeEEEEEECCEEEEEcCCCCc----cceEEEEeCCcEEEEcCCcc-ccCC
Confidence 4444446678999999988642 45677 999999999999999976643 45555556555555421000 1112
Q ss_pred eEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.=|.|.|..+ ..+.+.|.|.|.+|+..|++||+.|+.
T Consensus 172 k~~~F~I~t~--~~r~~~l~A~s~~e~~~Wi~aL~~ai~ 208 (211)
T 1u5e_A 172 KDCCFEICAP--DKRIYQFTAASPKDAEEWVQQLKFILQ 208 (211)
T ss_dssp GGGEEEEECS--SSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcC--CCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 2256777653 247889999999999999999999987
No 45
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=98.91 E-value=6.1e-09 Score=95.95 Aligned_cols=99 Identities=17% Similarity=0.280 Sum_probs=74.2
Q ss_pred ceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEEec
Q 005902 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYNR 125 (671)
Q Consensus 46 ~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~yn~ 125 (671)
+..+|||+.-. .++...=.+.|||||.+..|.|||.+....|. ..|-..++.|.|..-... +.-|.|.|||+
T Consensus 12 VirkGWL~k~~-~g~~k~~wk~rWFVLt~~~L~yyKd~~eke~~-----G~IpL~~~~vr~v~~~~~--~rk~~F~l~~~ 83 (125)
T 1dyn_A 12 VIRKGWLTINN-IGIMKGGSKEYWFVLTAENLSWYKDDEEKEKK-----YMLSVDNLKLRDVEKGFM--SSKHIFALFNT 83 (125)
T ss_dssp EEEEEEEEESC-CCGGGTSSEEEEEEEESSEEEEESSTTCSCEE-----EEEECTTEEEEECCSCSS--SSCEEEEEEET
T ss_pred eEEEEEEEEec-CccccCCceeeEEEEeccceeeecCCcccccc-----eEEECCCceEeccCCCCC--CCceEEEEECC
Confidence 67999999832 24444423999999999999999988865543 445557777777442222 23489999997
Q ss_pred cC-----cCcceeeeccCHHHHHHHHHHHHHH
Q 005902 126 LD-----ESKKGEIACATAGEARKWMEAFDQA 152 (671)
Q Consensus 126 ~~-----~~~~~~laa~~~eea~~W~~a~~~a 152 (671)
-. ..+.++|+|.|.||...||.||..|
T Consensus 84 d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 84 EQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp TSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred CCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 42 2468999999999999999999877
No 46
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.90 E-value=9.7e-09 Score=93.95 Aligned_cols=102 Identities=14% Similarity=0.222 Sum_probs=66.3
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEE-eCceeeeeccCCCCCCC-Cccc----eeeeecCcce-eecccceeeeCce
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFI-RGKYVEMYKRDPHENPG-IKPI----RRGVIGPTLM-VEELGRRRFNHGD 116 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl-~~~~l~~yK~~p~~~~~-~~pi----r~~~i~~~~~-v~d~Gr~~~~~~~ 116 (671)
+.+.++|||++-|. .-..| ++||||| ++..|.|||.+....|. .+++ ....++..|. |.. .. ....
T Consensus 6 ~~v~~~G~L~K~g~--~~k~W-kkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~---~~-~~~~ 78 (130)
T 2d9v_A 6 SGLVRGGWLWRQSS--ILRRW-KRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQP---PE-GRSR 78 (130)
T ss_dssp CCEEEEEEEEEECS--SSCCE-EEEEEEEETTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCC---CS-SCCT
T ss_pred CceeEEEEEEeecC--ccCCc-eeeEEEEccCCEEEEEeCCCCCCcCceEecccceeEEeccccccccCC---CC-CCCc
Confidence 45679999999764 34577 9999999 89999999976543321 1111 1112222221 210 00 0111
Q ss_pred EEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 117 VYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 117 ~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
=|.|.|..+. .+.+-|.|.|.+|+..||+||+.|+.
T Consensus 79 ~~~F~I~~~~--~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 79 DGLLTVNLRE--GSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp TTEEEEEETT--SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEeCC--CCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 2577776542 35789999999999999999999976
No 47
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.88 E-value=6.1e-09 Score=95.78 Aligned_cols=101 Identities=11% Similarity=0.195 Sum_probs=73.9
Q ss_pred ceeeeEEEEEccccccccceeeeeEEEe---CceeeeeccCCCCCC-CCccceeeeecCcceeeccc-ceeeeCceEEEE
Q 005902 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIR---GKYVEMYKRDPHENP-GIKPIRRGVIGPTLMVEELG-RRRFNHGDVYVM 120 (671)
Q Consensus 46 ~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~---~~~l~~yK~~p~~~~-~~~pir~~~i~~~~~v~d~G-r~~~~~~~~yv~ 120 (671)
..++|||++-|...+ ..| ++|||||+ |+.|.||| +|.+.+ +..|+.++.+..++.|.+.- ....+.+ |.|
T Consensus 15 ~~~~G~L~K~g~~~~-k~W-krRwFvL~~~~~~~L~Y~k-~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~--~~F 89 (126)
T 1v5p_A 15 NRICGFLDIEDNENS-GKF-LRRYFILDTQANCLLWYMD-NPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTP--FCF 89 (126)
T ss_dssp CCEECCEEEECTTCS-SCE-EEEEEEEETTTTEEEEESS-CTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCS--SEE
T ss_pred CceEEEEEEeCCCCC-CCc-cceEEEEecCCCCEEEEEC-CCCCCCCCceeeEEEECCCccEEecCCcccCCCCC--EEE
Confidence 348999999874432 355 99999999 77887776 554322 47899898888888887643 1112222 455
Q ss_pred EEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 121 ~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.|. ...+.+-|+|.|.+|...||+||..|+.
T Consensus 90 ~i~---t~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 90 VIN---ALSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp EEE---CSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred EEE---CCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 553 4467899999999999999999999965
No 48
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=98.87 E-value=4.9e-09 Score=99.49 Aligned_cols=101 Identities=11% Similarity=0.195 Sum_probs=61.6
Q ss_pred cceeeeEEEEEc--------cccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecC-cceeecccceeeeCc
Q 005902 45 YFEYFGWVYHMG--------TNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGP-TLMVEELGRRRFNHG 115 (671)
Q Consensus 45 ~~~~~Gw~y~~g--------~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~-~~~v~d~Gr~~~~~~ 115 (671)
.+.++|||++-. .......| ++|||||++..|.|||.+.... ..|...+.|+. +|.|+-. ....+
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~W-kkRwfvL~~~~L~yyk~~~~~~--~~~~g~i~l~~~~~~~~~~---~~~~~ 75 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPW-KQMYVVLRGHSLYLYKDKREQT--TPSEEEQPISVNACLIDIS---YSETK 75 (168)
T ss_dssp -CCEEEEEEEEECC------------CC-EEEEEEEETTEEEEESCTTCC----------CEECSSCEEEEC---SSSCS
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCc-eEEEEEEeCCEEEEEECCcccc--cccCCceEecccceEEEec---cccCC
Confidence 457999999521 11233456 9999999999999999765421 22322333333 2332200 00111
Q ss_pred eEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.=|+|.|... ++.+-|.|.|.+|+..||+||+.|+.
T Consensus 76 ~~~~F~I~t~---~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 76 RKNVFRLTTS---DCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp CSSEEEEECS---SCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEEeC---CceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 2268888855 36799999999999999999999986
No 49
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.85 E-value=1.1e-08 Score=92.10 Aligned_cols=102 Identities=15% Similarity=0.297 Sum_probs=69.3
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEe--CceeeeeccCCCCCCCCccceeeeecCcc--eeeccc----ceeeeC
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIR--GKYVEMYKRDPHENPGIKPIRRGVIGPTL--MVEELG----RRRFNH 114 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~--~~~l~~yK~~p~~~~~~~pir~~~i~~~~--~v~d~G----r~~~~~ 114 (671)
...+.++|||++-|.. ...| ++|||||+ +..|.|||.+.. ...|...+.+..+. .|++.| ++..
T Consensus 15 ~~~~~~~G~L~K~g~~--~~~W-k~R~fvL~~d~~~L~yy~~~~~---~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~-- 86 (129)
T 1x1g_A 15 SGTVVKQGYLAKQGHK--RKNW-KVRRFVLRKDPAFLHYYDPSKE---ENRPVGGFSLRGSLVSALEDNGVPTGVKGN-- 86 (129)
T ss_dssp CSEEEEEEEEEEECSS--SSSE-EEEEEEEEESSCEEEEECSSSC---CSSCSCCEESTTCCCEECCSSSSCSSCSSC--
T ss_pred CCCEEEEEEEEEECCC--CCCe-eeEEEEEeCCCCeEEEeCCCCc---CCccceEEECcCCEEEEeCCCCCcccccCC--
Confidence 3567799999997654 4556 99999999 579999996521 23455555555432 223331 1111
Q ss_pred ceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 115 GDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 115 ~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
+.-|.|.|.... .+.+.|.|.|.+|+..|++||+.|+.
T Consensus 87 ~~~~~F~I~~~~--~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 87 VQGNLFKVITKD--DTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp CCSSCEEECCTT--CCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred CCCceEEEEcCC--CCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 123577776542 34589999999999999999999975
No 50
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=98.83 E-value=1.1e-08 Score=98.55 Aligned_cols=106 Identities=8% Similarity=0.029 Sum_probs=72.5
Q ss_pred cceeeeEEEEEcccc--ccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecc--------cce----
Q 005902 45 YFEYFGWVYHMGTNS--IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEEL--------GRR---- 110 (671)
Q Consensus 45 ~~~~~Gw~y~~g~~~--~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~--------Gr~---- 110 (671)
.+.+||||++-|.++ +++.--++|||||.+..|.|||.+....++..|..++.+...+-|+.. +++
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~ 81 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRR 81 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccc
Confidence 356999999977554 554434999999999999999974211112455555555555555432 111
Q ss_pred -----------eeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 111 -----------RFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 111 -----------~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
++.+.. |.|.|... ++.+-|.|.|.+|...||+||+.|+.
T Consensus 82 ~~~~~~~~~~~i~~~~~-~~F~I~t~---~rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 82 GEESSEMEQISIIERFP-YPFQVVYD---EGPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp ------CCTTHHHHCCC-EEEEEEET---TCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred cCccccccccccccccc-ccEEEEeC---CceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 001111 78988754 36788999999999999999999987
No 51
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=98.78 E-value=5.7e-08 Score=89.11 Aligned_cols=105 Identities=13% Similarity=0.214 Sum_probs=69.8
Q ss_pred CcceeeeEEEEE----ccccccccceeeeeEEEeCceeeeeccCCCCC-------CCCccceeeeecCcceeecccceee
Q 005902 44 GYFEYFGWVYHM----GTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN-------PGIKPIRRGVIGPTLMVEELGRRRF 112 (671)
Q Consensus 44 ~~~~~~Gw~y~~----g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~-------~~~~pir~~~i~~~~~v~d~Gr~~~ 112 (671)
..+.++|||++- |-.++.++| ++|||||+|..|.|||.+-... ....|...+.+. +|.|+.- .+..
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~k~W-k~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~-~~~v~~~-~~~~ 86 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLRKNW-GPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLR-GAALAHG-RHLS 86 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECCCCC-EEEEEEEESSEEEEESCC--------------CCSEEEECT-TCEEEEC-TTSC
T ss_pred cceeEEEEEEEeeeccCCCcCCCCc-eEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeC-CcEEEEC-CCCC
Confidence 466799999984 224455788 9999999999999999763110 123555555554 3444421 1111
Q ss_pred eCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 113 NHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 113 ~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
.. =++|+|... ..+.+-|.|.|.+|+..|++||+.||.+
T Consensus 87 kr--~~~F~l~t~--~~~~yl~qA~s~~e~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 87 SR--RNVLHIRTI--PGHEFLLQSDHETELRAWHRALRTVIER 125 (129)
T ss_dssp SS--SSEEEEECT--TSCEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred CC--CcEEEEEcC--CCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 11 257777643 2356789999999999999999999983
No 52
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=98.77 E-value=3.2e-08 Score=94.02 Aligned_cols=103 Identities=12% Similarity=0.224 Sum_probs=76.9
Q ss_pred eeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCC---------C----C-----------------CCcc----
Q 005902 47 EYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHE---------N----P-----------------GIKP---- 92 (671)
Q Consensus 47 ~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~---------~----~-----------------~~~p---- 92 (671)
..+||||+ ..++-..| ++|||||.+..|.|+|..-.+ . | ...|
T Consensus 2 ~k~G~L~~--~~~~~~~w-~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~ 78 (150)
T 2fjl_A 2 IKNGILYL--EDPVNHEW-YPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREH 78 (150)
T ss_dssp CEEEEEEE--EETTTTEE-EEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSS
T ss_pred CcceEEEe--ecCCCCCc-eEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhc
Confidence 36899999 67899999 999999999999999822110 0 0 0111
Q ss_pred ----------ceeeeecCcceeecccceeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 93 ----------IRRGVIGPTLMVEELGRRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 93 ----------ir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.+..|.-.+|.|+..- .-.+..-|||+|-.+......+.|||.|-||+..||.||++|+.
T Consensus 79 l~E~~~lG~l~kG~IdL~gc~V~~~~--~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 79 LDENSPLGDLLRGVLDVPACQIAIRP--EGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp SCTTTTTTTCCCEEECSTTCEEEEET--TCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccceEecCccEEEecc--CCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 1466666889998411 01224679999988766567799999999999999999999975
No 53
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.76 E-value=2.8e-08 Score=99.87 Aligned_cols=100 Identities=11% Similarity=0.203 Sum_probs=77.6
Q ss_pred cCCcceeeeEEEEEccc--cccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEE
Q 005902 42 EKGYFEYFGWVYHMGTN--SIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYV 119 (671)
Q Consensus 42 ~~~~~~~~Gw~y~~g~~--~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv 119 (671)
..+.+.++|||++-|.. ++++.--++|||||++..|.|||.+.. ..|...+.+..++.|++...+ =|.
T Consensus 54 ~~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~----~~~~g~I~L~~~~~v~~~~~k------~~~ 123 (228)
T 3tfm_A 54 SKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSE----EKLKGTVEVRSAKEIIDNTNK------ENG 123 (228)
T ss_dssp SCCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTC----CSEEEEEEGGGCSEEEEETTT------TSE
T ss_pred cCCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCC----cceeEEEEcCCCEEeccCCCC------CcE
Confidence 44667799999998873 455444499999999999999996653 356667777777767754321 256
Q ss_pred EEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 120 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 120 ~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
|.|.. ..+.+.|.|.|.+|+..|++||++|+.
T Consensus 124 F~I~t---~~r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 124 IDIIM---ADRTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp EEEEC---SSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEc---CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 77754 468899999999999999999999987
No 54
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=98.76 E-value=2.9e-08 Score=88.84 Aligned_cols=95 Identities=14% Similarity=0.130 Sum_probs=64.7
Q ss_pred eeeEEEEE-cccc-ccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCc-ce--eecccceeeeCceEEEEEE
Q 005902 48 YFGWVYHM-GTNS-IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPT-LM--VEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 48 ~~Gw~y~~-g~~~-~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~-~~--v~d~Gr~~~~~~~~yv~~~ 122 (671)
+||||++= |..+ ..++| ++|||||+++.|.|||.+-. ..|+...-+.+. |. +. ....+.=++|.|
T Consensus 2 keG~L~kK~g~~~~~~k~W-k~rwfvL~~~~L~~yk~~~~----~~p~~~i~l~~~~~~~~~~-----~~~~~r~~~F~l 71 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHW-KTCFVVLSNGILYQYPDRTD----VIPLLSVNMGGEQCGGCRR-----ANTTDRPHAFQV 71 (112)
T ss_dssp EEEEEEECCSCCCSSCCCC-EEEEEEEETTEEEEESSSSC----CSCSEEEETTC-CEEEEEE-----CCCSSCTTEEEE
T ss_pred ceEEEEEeCCCCCCCCCCc-eEEEEEEECCEEEEECCCCC----CCccceEEecCCEEEeeec-----cCCCCCCeEEEE
Confidence 79999863 3333 34566 99999999999999996632 345444434322 33 11 111222347787
Q ss_pred EeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 123 yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
..+. .+.+-|.|.|.||+..||+||..|+.
T Consensus 72 ~~~~--~~~y~f~A~s~ee~~~Wi~ai~~~~~ 101 (112)
T 3cxb_B 72 ILSD--RPCLELSAESEAEMAEWMQHLCQAVS 101 (112)
T ss_dssp EETT--SCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EcCC--CCEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 6543 34688999999999999999999977
No 55
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.76 E-value=2.5e-08 Score=89.67 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=69.3
Q ss_pred CcceeeeEEEEEccc-----cc-cccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCc-ceeecccceeeeCce
Q 005902 44 GYFEYFGWVYHMGTN-----SI-GHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPT-LMVEELGRRRFNHGD 116 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~-----~~-g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~-~~v~d~Gr~~~~~~~ 116 (671)
+.+.+||||++-+.. +. .++| ++|||||++..|.|||.+....++..|.-.+.|+-. |.|+-. .+ +.+.
T Consensus 6 ~~v~~eG~L~kk~~~~~~gk~~~~~~W-k~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~-~~--~~~r 81 (123)
T 1wjm_A 6 SGEQMEGMLCRKQEMEAFGKKAANRSW-QNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVA-FD--YRKR 81 (123)
T ss_dssp CCCCEEEEEEEEEEEEETTEECSCCCC-EEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEEC-TT--CSSC
T ss_pred CCeEEEEEEEEEEEEeCCCccCCCCCc-cEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeec-cc--ccCC
Confidence 556799999996543 22 3456 999999999999999976543322222222233322 333311 01 1222
Q ss_pred EEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 117 VYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 117 ~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
=|+|+|.... .+.+-|.|.|.+|+..|++||+.|+.
T Consensus 82 ~~~F~i~~~~--~~~~~f~A~s~~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 82 KHVFKLGLQD--GKEYLFQAKDEAEMSSWLRVVNAAIA 117 (123)
T ss_dssp SSEEEEECSS--SCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcC--CcEEEEECCCHHHHHHHHHHHHHHHh
Confidence 3678886532 36788999999999999999999987
No 56
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=98.73 E-value=3.6e-08 Score=94.23 Aligned_cols=105 Identities=7% Similarity=0.026 Sum_probs=69.8
Q ss_pred CcceeeeEEEEEcccc--ccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccce--eeeCceEEE
Q 005902 44 GYFEYFGWVYHMGTNS--IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRR--RFNHGDVYV 119 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~--~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~--~~~~~~~yv 119 (671)
..+.+||||++-|.++ ++..--++|||||++..|.|||.+.... .|.-++.+...+.|+...-. ...-..-|.
T Consensus 13 ~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~~---~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~ 89 (164)
T 2lul_A 13 FNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKK---YRKGFIDVSKIKCVEIVKNDDGVIPCQNKYP 89 (164)
T ss_dssp SSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSSC---CCCCEEEGGGCCEEEECCCCSSSCCSSSCSE
T ss_pred CCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCccc---ccccEEEEeeeEEEEeccccccCccccccee
Confidence 4667999999977654 3443238999999999999999654322 12222333333344322111 111223456
Q ss_pred EEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 120 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 120 ~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
|.|..+ .+.+-|.|.|.+|+..||+||++++.
T Consensus 90 f~i~t~---~rt~~l~A~s~~e~~~Wi~aL~~~i~ 121 (164)
T 2lul_A 90 FQVVHD---ANTLYIFAPSPQSRDLWVKKLKEEIK 121 (164)
T ss_dssp EEEECS---SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEecC---CcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 666643 46789999999999999999999988
No 57
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=98.71 E-value=2.3e-08 Score=90.95 Aligned_cols=108 Identities=8% Similarity=0.117 Sum_probs=62.3
Q ss_pred cceeeeEEEEEccccccccceeeeeEEEeC-ceeeeeccCCC---C-CCCCccceeeeec--------Ccceeecc--cc
Q 005902 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFIRG-KYVEMYKRDPH---E-NPGIKPIRRGVIG--------PTLMVEEL--GR 109 (671)
Q Consensus 45 ~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~-~~l~~yK~~p~---~-~~~~~pir~~~i~--------~~~~v~d~--Gr 109 (671)
.+.++|||++-+.+.+...| ++|||||++ ..|.||+.+.. . ..+++.+....+. .+|.+... |-
T Consensus 3 ~~~k~G~L~K~~g~~~~k~W-kkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~ 81 (128)
T 2rlo_A 3 IPIKQSFLLKRSGNSLNKEW-KKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGS 81 (128)
T ss_dssp CEEEEEEEEEECSCSTTCCE-EEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCC
T ss_pred cceeEEEEEEecCCCccCCc-cEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCcccccccccccccccc
Confidence 45699999997543466778 999999997 67877764111 0 0011111111110 11111100 00
Q ss_pred eeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 110 RRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 110 ~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
.......=|.|.|... ..+.+.|.|.|.+|+..||+||+.||..
T Consensus 82 ~~~~~~~~~~F~I~t~--~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 82 AGQAEEENFEFLIVSS--TGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp CSSCCCCCCCEEEECT--TSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCceEEEEcC--CCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 0000011245666543 2367899999999999999999999873
No 58
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=98.66 E-value=1.1e-07 Score=87.98 Aligned_cols=101 Identities=14% Similarity=0.121 Sum_probs=74.7
Q ss_pred eeeeEEEEE-----ccccccccceeeeeEEEeCceeeeeccCCCCC---C--CCccceeeeecCcceeecccceeeeCce
Q 005902 47 EYFGWVYHM-----GTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN---P--GIKPIRRGVIGPTLMVEELGRRRFNHGD 116 (671)
Q Consensus 47 ~~~Gw~y~~-----g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~---~--~~~pir~~~i~~~~~v~d~Gr~~~~~~~ 116 (671)
.|+|.|++- |...+-++| +.|||||.|+.|.||+.+.... + +..|.+...| .+++|+. .-+.+.
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksW-kr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L-~g~~V~~----~e~~~~ 75 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSW-TRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSI-VGWMVQL----PDDPEH 75 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCC-EEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEEC-TTCEEEC----CCCTTS
T ss_pred ceeeeeeeeehhhcCCcccccCc-ccEEEEEeCCEEEEEcccccccccccccccCCCceEEe-CCCEEEe----cCCCCC
Confidence 588999975 665455677 9999999999999999663111 0 2356655555 6677761 223334
Q ss_pred EEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 117 VYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 117 ~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
=++|.|+|... .+.+.|.|.|.+++..|+.||..|+.
T Consensus 76 ~~~F~L~~~~~-G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 76 PDIFQLNNPDK-GNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp TTEEEEECTTS-CSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeeCCC-CCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 67899998643 57799999999999999999999987
No 59
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=98.65 E-value=4e-08 Score=88.62 Aligned_cols=105 Identities=10% Similarity=0.098 Sum_probs=67.0
Q ss_pred CcceeeeEEEEEcc------ccccccceeeeeEEEeCceeeeeccCCCCCCC-Ccccee-eeec-CcceeecccceeeeC
Q 005902 44 GYFEYFGWVYHMGT------NSIGHEYCHLRFLFIRGKYVEMYKRDPHENPG-IKPIRR-GVIG-PTLMVEELGRRRFNH 114 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~------~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~-~~pir~-~~i~-~~~~v~d~Gr~~~~~ 114 (671)
..+.+||||++=+. ....++| ++|||||+|..|.|||.+....+. ..|++. +.|+ .+|.|+-- .. +.
T Consensus 6 ~~v~k~G~L~rK~~~~~~gkk~~~~~W-k~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~-~d--~~ 81 (122)
T 1dro_A 6 AGEGHEGYVTRKHEWDSTTKKASNRSW-DKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIA-SD--YT 81 (122)
T ss_dssp SSSSEEEEEEEECSCCCCCCTTCCCCC-EEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEEC-CS--SS
T ss_pred CceEEEEEEEEEEEEeCCCccCCCCCc-cEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeC-CC--CC
Confidence 35679999998432 2244667 999999999999999976543321 222220 1222 22333210 00 11
Q ss_pred ceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 115 GDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 115 ~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
+.=++|+|.. ...+.+-|.|.|.+|+..|++||+.||.
T Consensus 82 kr~~~F~l~t--~~~~~~lfqA~s~~e~~~Wi~ai~~~i~ 119 (122)
T 1dro_A 82 KKKHVLRVKL--ANGALFLLQAHDDTEMSQWVTSLKAQSD 119 (122)
T ss_dssp SSTTEEEEEC--SSSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEE--cCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 1235677752 2357788999999999999999999986
No 60
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=98.65 E-value=7.2e-08 Score=98.60 Aligned_cols=107 Identities=10% Similarity=0.098 Sum_probs=72.7
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCC-CccceeeeecCcceeecccceeeeCceEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPG-IKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~-~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~ 122 (671)
..+.++||||.-|.++ ..| ++|||||+++.|.|||......|. .+|+-.. -+-.+.....+++..+...=|.|.|
T Consensus 166 ~~p~~~G~L~k~~~~~--k~W-kkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l-~~~~v~~~~~~~~~~~~~~~~~F~i 241 (291)
T 3tca_A 166 IVPELEGALYLKEDGK--KSW-KRRYFLLRASGIYYVPKGKTKTSRDLACFIQF-ENVNIYYGIQCKMKYKAPTDHCFVL 241 (291)
T ss_dssp CCCCCEEEEEEECTTS--SCE-EEEEEEECSSEEEECCTTCCSSTTTCEEEEEG-GGCEEEEECSHHHHHCCSSSCEEEE
T ss_pred CCCceEEEEEEeCCCC--CCc-eEEEEEEeCCEEEEEecCccccccCceeeccc-eeEEEEecCccccccCCCCCeEEEE
Confidence 4567999999977653 467 999999999999999977665543 2332211 1111222223344444444578888
Q ss_pred EeccC---cCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 123 YNRLD---ESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 123 yn~~~---~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
..... ..+.+-|+|.|.+|...||.||+.|+-
T Consensus 242 ~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak~ 276 (291)
T 3tca_A 242 KHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAKY 276 (291)
T ss_dssp ECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 76432 234567999999999999999999863
No 61
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=98.64 E-value=1.2e-07 Score=97.57 Aligned_cols=109 Identities=14% Similarity=0.231 Sum_probs=72.6
Q ss_pred CcCCcceeeeEEEEE------ccccc----cccceeeeeEEEeCceeeeeccCCCCC--CCCccceeeeecCcceeeccc
Q 005902 41 KEKGYFEYFGWVYHM------GTNSI----GHEYCHLRFLFIRGKYVEMYKRDPHEN--PGIKPIRRGVIGPTLMVEELG 108 (671)
Q Consensus 41 ~~~~~~~~~Gw~y~~------g~~~~----g~~~~~~Ryfvl~~~~l~~yK~~p~~~--~~~~pir~~~i~~~~~v~d~G 108 (671)
+..+.+.++|||++- ...++ ...| ++|||||+|..|.|||.+.... ....|...+.+. +|.|+..-
T Consensus 6 ~~~~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~W-krRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~-~~~v~~~~ 83 (263)
T 3a8p_A 6 KEQGVVRKAGWLFFKPLVTLQKERKLELVARRKW-KQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAE-DSIVQSVP 83 (263)
T ss_dssp ----CEEEEEEEEEEEEEEEEGGGEEEECTTCCC-EEEEEEEETTEEEEESSCCC------CCCSEEEECT-TCEEEECT
T ss_pred ccCCCeEEEEEeeecccccccCCCCccCccCCCc-eEEEEEEcCCEEEEEecCcccccccccCccceEEcC-CcEEEECC
Confidence 345678899999931 23333 3566 9999999999999999865321 125666665555 45554211
Q ss_pred ceeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 005902 109 RRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (671)
Q Consensus 109 r~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~ 156 (671)
-.. +.=|+|.|... ..+.+.|.|.|.+|+..||+||+.|+...
T Consensus 84 ~~~---kk~~~F~I~t~--~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 84 EHP---KKEHVFCLSNS--CGDVYLFQATSQTDLENWVTAIHSACASL 126 (263)
T ss_dssp TCS---SCSSEEEEECT--TSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred cCC---CCCCEEEEEcC--CCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 111 12367888765 35678899999999999999999999844
No 62
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=98.56 E-value=2.4e-07 Score=98.86 Aligned_cols=98 Identities=14% Similarity=0.312 Sum_probs=71.2
Q ss_pred cceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEEe
Q 005902 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYN 124 (671)
Q Consensus 45 ~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~yn 124 (671)
.+.++|||++-|.. -..| ++|||||++..|.|||.+.... |...+.+. +|.|+... ..+.=|+|.|+.
T Consensus 212 ~~~k~G~L~K~g~~--~k~W-kkRwFVL~~~~L~Yyk~~~~~~----p~G~I~L~-~~~v~~~~----~~~~~~~F~I~~ 279 (347)
T 2r09_A 212 NPDREGWLLKLGGR--VKTW-KRRWFILTDNCLYYFEYTTDKE----PRGIIPLE-NLSIREVE----DPRKPNCFELYN 279 (347)
T ss_dssp CCCEEEEEEEECSS--SCCE-EEEEEEEETTEEEEESSTTCSS----CSEEEECT-TCEEEEEC----CSSCSSEEEEEC
T ss_pred ccccCCeeEecCCC--cccc-eeEEEEEcCCEEEEEcCCCccC----CcEEEEcC-CeEEEEcc----CCCCCCEEEEEe
Confidence 46799999998754 3566 9999999999999999765433 44344444 34454321 122236788887
Q ss_pred ccC-------------------cCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 125 RLD-------------------ESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 125 ~~~-------------------~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
+.. ..+.+.|.|.|.+|+..|++||+.|+.
T Consensus 280 ~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 280 PSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp SSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 632 246788999999999999999999987
No 63
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=98.56 E-value=3.7e-07 Score=83.09 Aligned_cols=104 Identities=13% Similarity=0.218 Sum_probs=66.9
Q ss_pred CCcceeeeEEEEE-----cccccc-ccceeeeeEEEeCceeeeeccCCCCCCC--------Cccceeeeec-Ccceeecc
Q 005902 43 KGYFEYFGWVYHM-----GTNSIG-HEYCHLRFLFIRGKYVEMYKRDPHENPG--------IKPIRRGVIG-PTLMVEEL 107 (671)
Q Consensus 43 ~~~~~~~Gw~y~~-----g~~~~g-~~~~~~Ryfvl~~~~l~~yK~~p~~~~~--------~~pir~~~i~-~~~~v~d~ 107 (671)
.+.+.+||||++= |+ +.+ ++| ++|||||+|..|.|||......++ ..|. ++|+ .+|.|+-.
T Consensus 5 ~~~v~keG~L~rK~~~~~gk-k~~~r~W-~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~--~~i~L~~a~v~~~ 80 (124)
T 3pp2_A 5 TKTLDKAGVLHRTKTADKGK-RLRKKHW-SASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPE--YTVELRGATLSWA 80 (124)
T ss_dssp ----CEEEEEEEEEEEETTE-ECSSCCC-EEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEE--EEEECTTCEEEEC
T ss_pred CCcEEEEEEEEEEEeccCCc-cCCCCCc-eEEEEEEECCEEEEEecCccccccCccCcccccCCc--ceEEcCCCEEEec
Confidence 3567799999985 33 335 577 999999999999999965433211 1344 3344 44666532
Q ss_pred cceeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 108 GRRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 108 Gr~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
-.....+ =+||+|-.. ..+..-|.|.|.+|+..|+.+|..||+
T Consensus 81 ~~d~~kr--k~vF~l~t~--~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 81 PKDKSSR--KNVLELRSR--DGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp CGGGCSS--SSEEEEECT--TSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred ccccCCC--ceEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 1011111 246776543 245788999999999999999999986
No 64
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=98.52 E-value=3.1e-07 Score=99.36 Aligned_cols=99 Identities=13% Similarity=0.228 Sum_probs=72.1
Q ss_pred CcceeeeEEEEEcccc-ccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceee-cccceeeeCceEEEEE
Q 005902 44 GYFEYFGWVYHMGTNS-IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVE-ELGRRRFNHGDVYVMR 121 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~-~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~-d~Gr~~~~~~~~yv~~ 121 (671)
+.+.++||||.-..+. .+..| ++|||||++..|.|||+.....+...+|+...| +.. +..|+ |.|.
T Consensus 299 ~~~~k~G~L~k~~~~g~~~~~W-~rrwfvl~~~~l~y~~~~~~~~~~~~~l~~~~v----~~~~~~~r~-------~cF~ 366 (407)
T 4h8s_A 299 NLIQKAGYLNLRNKTGLVTTTW-ERLYFFTQGGNLMCQPRGAVAGGLIQDLDNCSV----MAVDCEDRR-------YCFQ 366 (407)
T ss_dssp SCSCCEEEEEEEEECSSSCEEE-EEEEEEECSSCEECCCTTCSSCCCCBCSSCCEE----EEECCTTCS-------SEEE
T ss_pred CcceeeceeeeeccCCCCCCCc-eEEEEEEECCEEEEEeCCCCCCCeEEECCceEE----EECCCCCCC-------ceEE
Confidence 4567999999965543 45677 999999999999999977655545555554332 222 22222 6788
Q ss_pred EEeccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 122 LYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 122 ~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
|..+. ..+.+.|.|.|.+|...||+||+.|+.+
T Consensus 367 i~~~~-~~~~~~l~A~s~~e~~~Wi~ai~~a~~~ 399 (407)
T 4h8s_A 367 ITTPN-GKSGIILQAESRKENEEWICAINNISRQ 399 (407)
T ss_dssp EECTT-SSCCEEEECSSSHHHHHHHHHHHHHHSC
T ss_pred EEecC-CCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 87653 2356899999999999999999999873
No 65
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=98.46 E-value=1.2e-07 Score=97.67 Aligned_cols=97 Identities=19% Similarity=0.323 Sum_probs=71.5
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCc-------eeeeeccCCCCCCC-CccceeeeecCcceeecccceeeeCc
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK-------YVEMYKRDPHENPG-IKPIRRGVIGPTLMVEELGRRRFNHG 115 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~-------~l~~yK~~p~~~~~-~~pir~~~i~~~~~v~d~Gr~~~~~~ 115 (671)
+.+.++|||++- ..| ++|||||++. .|.|||.+...... ..|...+.+..++.|+... ..+
T Consensus 8 ~~v~k~G~L~K~------K~W-kkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~----~~~ 76 (264)
T 1qqg_A 8 SDVRKVGYLRKP------KSM-HKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRA----DSK 76 (264)
T ss_dssp -CEEEEEEEECT------TTC-CEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEEC----CSS
T ss_pred CCccEEEEEEEC------CCC-EeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEecc----CCC
Confidence 466799999974 477 9999999999 99999966541101 3566777777666665321 122
Q ss_pred eEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.=|.|.|+.+ .+.+.|+|.|.+|+..|+++|+.++.
T Consensus 77 ~~~~F~I~t~---~rty~l~A~se~e~~~Wi~aL~~~~~ 112 (264)
T 1qqg_A 77 NKHLVALYTR---DEHFAIAADSEAEQDSWYQALLQLHN 112 (264)
T ss_dssp CSSEEEEEES---SCEEEEECSSHHHHHHHHHHHHHHC-
T ss_pred CCcEEEEEEC---CEEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 3367888854 68899999999999999999999977
No 66
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=98.45 E-value=7.2e-07 Score=96.55 Aligned_cols=102 Identities=15% Similarity=0.161 Sum_probs=70.9
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCccee---ecccceeeeC-ceEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMV---EELGRRRFNH-GDVYV 119 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v---~d~Gr~~~~~-~~~yv 119 (671)
..+.++|||++-|.. +...| ++|||||.+..|.|||.+... .|...+.+...+-| .+.--....+ +--|.
T Consensus 267 ~~~~k~G~L~K~g~~-~~k~W-KkRwFVL~~~~L~YYk~~~d~----~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~ 340 (386)
T 3lju_X 267 RNYLKEGYMEKTGPK-QTEGF-RKRWFTMDDRRLMYFKDPLDA----FARGEVFIGSKESGYTVLHGFPPSTQGHHWPHG 340 (386)
T ss_dssp CCCSEEEEEEECCTT-SCSCC-EEEEEEEETTEEEEESSTTCS----BCSEEEECCCGGGTCEEEESCCTTCCSCCSCEE
T ss_pred cccceeeeEEEECCC-CCCCC-cccEEEEECCEEEEEecCCCc----ccceEEEeecceeeeeecccCCccccccCCCcE
Confidence 456799999996643 23567 999999999999999975543 34444444443332 2111111111 11378
Q ss_pred EEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 120 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 120 ~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
|.|..+ .+.+.|.|.|.+|+..|+.||+.|+.
T Consensus 341 F~I~t~---~rty~l~A~s~~e~~~Wi~aL~~~i~ 372 (386)
T 3lju_X 341 ITIVTP---DRKFLFACETESDQREWVAAFQKAVD 372 (386)
T ss_dssp EEEECS---SCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 888854 58899999999999999999999988
No 67
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=98.40 E-value=6.3e-07 Score=96.29 Aligned_cols=99 Identities=10% Similarity=0.173 Sum_probs=65.4
Q ss_pred CcceeeeEEEEEccccc-cccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSI-GHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~-g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~ 122 (671)
+.+.++||||+-|.+.+ +..| ++|||||++..|.|||. +. ..|.....+. +|.|...- ....=|+|.|
T Consensus 276 ~~~~k~G~L~K~~~~~~~~~~W-kkRwfvL~~~~L~y~k~-~~----~~~~~~i~l~-~~~v~~~~----~~~r~~~F~i 344 (385)
T 2q13_A 276 NLTRKAGYLNARNKTGLVSSTW-DRQFYFTQGGNLMSQAR-GD----VAGGLAMDID-NCSVMAVD----CEDRRYCFQI 344 (385)
T ss_dssp CCSCCEEEEEEC--------CC-EEEEEEEETTEEEEECS-SC----SSCEEEEECT-TCEEEEEC----CTTCSSEEEE
T ss_pred CCccEEEEEEEecCCCCCcCCc-eeEEEEEECCEEEEecC-CC----cCCCceEEcc-ceEEEecc----ccCCCceEEE
Confidence 46679999999876653 3467 99999999999999997 32 2243333333 34443110 0112267888
Q ss_pred EeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 123 yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
..+.. .+.+.|.|.|.+|...||+||+.|++
T Consensus 345 ~t~~~-~~~~~l~A~s~~e~~~Wi~ai~~~~~ 375 (385)
T 2q13_A 345 TSFDG-KKSSILQAESKKDHEEWICTINNISK 375 (385)
T ss_dssp ECTTS-CBCCCEECSSHHHHHHHHHHHHHHHT
T ss_pred EeCCC-CeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 75532 27789999999999999999999987
No 68
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=98.24 E-value=1.2e-06 Score=79.57 Aligned_cols=106 Identities=12% Similarity=0.244 Sum_probs=70.1
Q ss_pred eeeeEEEEEccccccc-cceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccce-eee---CceEEEEE
Q 005902 47 EYFGWVYHMGTNSIGH-EYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRR-RFN---HGDVYVMR 121 (671)
Q Consensus 47 ~~~Gw~y~~g~~~~g~-~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~-~~~---~~~~yv~~ 121 (671)
.|||||-.=....+.. .| ++|||||.+..|.|||.++... ...|...+-++....|+-..-. .+| ...=++|+
T Consensus 2 ~~eGwl~~pk~~~~~k~~W-kkr~~vL~~~kL~~y~~~~~~~-~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~ 79 (117)
T 2rov_A 2 RLEGWLSLPVRNNTKKFGW-VKKYVIVSSKKILFYDSEQDKE-QSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQ 79 (117)
T ss_dssp CSEEEEECCCCSSSSCCCC-CEEEEEEETTEEEEESCHHHHH-TTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEE
T ss_pred ceEEEEEeecCCCccCCCc-EEEEEEEECCEEEEEECCCCcc-cCCceEEEECcccEEEEEcccccccccccccCCcEEE
Confidence 5899998633334444 56 9999999999999999865431 2456665555555554422110 011 11226788
Q ss_pred E-Eecc--CcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 122 L-YNRL--DESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 122 ~-yn~~--~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
| |... ...+.+-|-|.|.||-.+|+.||+.+|.
T Consensus 80 I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 80 ILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp EEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred EEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 7 4322 2347899999999999999999998864
No 69
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.16 E-value=7.2e-06 Score=76.73 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=79.9
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~y 123 (671)
+.++.++|+=..+..++..--.+.|||||+++.|.|||++.... ..||-.+.+. +|.|+.. ..+ .+--|.|+|-
T Consensus 7 ~~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~~--~ePig~I~L~-gceV~pd--~~~-~~~kf~ikl~ 80 (137)
T 2ys3_A 7 GIPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAP--GDPIQQLNLK-GCEVVPD--VNV-SGQKFCIKLL 80 (137)
T ss_dssp SCCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTTT--SCCSCCBCTT-TCEEEEC--CBG-GGTBEEEEEE
T ss_pred CCcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhcc--CCCceEEECC-CCEEecc--ccc-cCCceEEEEE
Confidence 45779999999999999877669999999999999999988764 3565444444 4566644 122 3345777777
Q ss_pred ecc-CcCcceeeeccCHHHHHHHHHHHHHHH
Q 005902 124 NRL-DESKKGEIACATAGEARKWMEAFDQAK 153 (671)
Q Consensus 124 n~~-~~~~~~~laa~~~eea~~W~~a~~~a~ 153 (671)
-+. +..+.+-|.|.|.++-++||.|+..|.
T Consensus 81 iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAs 111 (137)
T 2ys3_A 81 VPSPEGMSEIYLRCQDEQQYARWMAGCRLAS 111 (137)
T ss_dssp EECSSSEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEEECCCHHHHHHHHHHHHHhc
Confidence 774 345789999999999999999999884
No 70
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=98.16 E-value=4.6e-06 Score=90.19 Aligned_cols=102 Identities=13% Similarity=0.198 Sum_probs=64.5
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEe-CceeeeeccCCCCCC-CCccceeeeecCcceeecccceeeeCceEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIR-GKYVEMYKRDPHENP-GIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMR 121 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~-~~~l~~yK~~p~~~~-~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~ 121 (671)
.++..||||.+-|. +-..| ++|||||. +..|.|||.+|...+ +.+||....+-.+..+...+.+ . +.|.
T Consensus 4 ~~v~keG~L~K~g~--~~k~W-k~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~---~---~~f~ 74 (446)
T 4ejn_A 4 VAIVKEGWLHKRGE--YIKTW-RPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPR---P---NTFI 74 (446)
T ss_dssp CCEEEEEEEEEEET--TTTEE-EEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEEEEECSSS---T---TEEE
T ss_pred ceEEEEeeEEeecc--ccccc-cceEEEEeeCCEEEEEecCCCCCccCcccccCccccceeecCCCCCC---C---ceeE
Confidence 35779999999653 33366 99999997 789999999998775 5788877655444333322111 1 1233
Q ss_pred EEeccCcC-cceeeeccCHHHHHHHHHHHHHHHH
Q 005902 122 LYNRLDES-KKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 122 ~yn~~~~~-~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
|....... -.-.+.+.++||...|+.||+.|++
T Consensus 75 I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~ 108 (446)
T 4ejn_A 75 IRCLQWTTVIERTFHVETPEEREEWTTAIQTVAD 108 (446)
T ss_dssp EEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhh
Confidence 33222110 0116788999999999999999976
No 71
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=98.12 E-value=3.7e-06 Score=91.04 Aligned_cols=99 Identities=13% Similarity=0.134 Sum_probs=66.7
Q ss_pred cceeeeEEEEEccccccccceeeeeEEE--eCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEE
Q 005902 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFI--RGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 45 ~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl--~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~ 122 (671)
...+||||++-|.. ..+| ++||||| +++.|.|||.+.. ..|...+.+.....|..- ...+.-+.|.|
T Consensus 145 ~~~keG~L~KrG~~--~k~W-krRwFVL~~~~~~L~Yy~~~~~----~~p~g~I~L~~~~~~~~~----~~~~~~~~f~I 213 (386)
T 3lju_X 145 AGYREGFLWKRGRD--NGQF-LSRKFVLTEREGALKYFNRNDA----KEPKAVMKIEHLNATFQP----AKIGHPHGLQV 213 (386)
T ss_dssp SSEEEEEEEEECSS--SCCE-EEEEEEEETTTTEEEEEC---------CCSEEEEGGGEEEEECH----HHHTSTTCEEE
T ss_pred ccccccceeeeccc--cCCc-eEEEEEEEcCCCEEEEECCCCc----cCcccEEEeeccEEEEcc----cccCCCceEEE
Confidence 34599999997765 4577 8899999 9999999997653 445555556554344310 00011234444
Q ss_pred E-eccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 123 Y-NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 123 y-n~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
. -....++.+-|.|.|.+|+..|++||+.|..
T Consensus 214 ~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~ 246 (386)
T 3lju_X 214 TYLKDNSTRNIFIYHEDGKEIVDWFNALRAARF 246 (386)
T ss_dssp EEEETTEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEecCCCceEEEEEcCCHHHHHHHHHhhhhccc
Confidence 2 3345568899999999999999999998865
No 72
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.87 E-value=8.5e-05 Score=68.49 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=82.2
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCc------eeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK------YVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDV 117 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~------~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~ 117 (671)
..++++||||.=..-++|.-| |+|||||-.. .|+||.-+-..+.+..|=|-+-...|++|..-+-++---+.-
T Consensus 10 e~~vk~G~L~~q~q~~fgkKW-rk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~ 88 (127)
T 2d9w_A 10 DGAVKQGFLYLQQQQTFGKKW-RRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDT 88 (127)
T ss_dssp CCSSEEEEEEECBCSSSSCBC-CEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSSC
T ss_pred CccccceEEEecccchhhhhh-heeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCCcc
Confidence 567799999996555999987 9999999864 688898754444456777888889999999776662222345
Q ss_pred EEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHH
Q 005902 118 YVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAK 153 (671)
Q Consensus 118 yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~ 153 (671)
++|+|+-+ ++-+-|||.+ +|...||.+|.+.+
T Consensus 89 ~aF~l~T~---er~~~laAe~-~E~~~Wi~~ic~~a 120 (127)
T 2d9w_A 89 SAFFLETK---ERLYLLAAPA-AERGDWVQAICLLA 120 (127)
T ss_dssp EEEEEEES---SCEEEEEECH-HHHHHHHHHHHHHH
T ss_pred eEEEEEeC---CcEEEEEeCc-HHHHHHHHHHHHHh
Confidence 99999854 5788999996 58999999998774
No 73
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=97.82 E-value=5e-05 Score=78.06 Aligned_cols=107 Identities=11% Similarity=0.090 Sum_probs=71.0
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCccee--ecccceeeeCceEEEE
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMV--EELGRRRFNHGDVYVM 120 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v--~d~Gr~~~~~~~~yv~ 120 (671)
.+.++.+||||.-+..+ ..| ++|||||++.-|.|||+.-...|+ -|..++--.++-| --.+++.+.--.=|.|
T Consensus 129 s~~P~~~G~L~~ke~~~--K~W-kkRyfvLr~sgLy~~~k~~sk~~r--~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F 203 (256)
T 3hk0_A 129 SSSPEIQGFLHVKELGK--KSW-KKLYVCLRRSGLYCSTKGTSAAPR--HLQLLADLEDSNIFSLIAGRKQYNAPTDHGL 203 (256)
T ss_dssp TSCEEEEEEEEEECTTS--SCE-EEEEEEEETTEEEEESSTTCCCGG--GEEEEECCTTEEEEEESSTHHHHCCSSSEEE
T ss_pred CCCCcceeEEEEecCCC--Ccc-eEEEEEEeCCEEEEEecCCCCccc--cceEEEEcCCCEEEEecccccccCCCCCCEE
Confidence 35678999999865443 577 999999999999888854322221 1222222233333 2234554444456788
Q ss_pred EEEeccC---cCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 121 RLYNRLD---ESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 121 ~~yn~~~---~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
+|...+. .....-|.|.+.++...|+.||+.|+-
T Consensus 204 ~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 204 CIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp EEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 8875543 233468999999999999999999965
No 74
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=97.76 E-value=5.9e-05 Score=78.51 Aligned_cols=106 Identities=11% Similarity=0.130 Sum_probs=69.9
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeec--ccceeeeCceEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEE--LGRRRFNHGDVYVMR 121 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d--~Gr~~~~~~~~yv~~ 121 (671)
+.++.+||||.-+..+ ..| ++|||||+++-|.||++.-...| .-+-.++.-.+|-|.- .+++.+.--.=|.|+
T Consensus 156 ~~pe~~G~L~~k~~~~--k~W-kkRyfvLr~sgLyy~~K~~sk~~--r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ 230 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDGK--KSW-KKRYFLLRASGIYYVPKGKAKVS--RDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLV 230 (281)
T ss_dssp CCCCCEEEEEEECTTS--SCE-EEEEEEECSSCEEEC-----------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEE
T ss_pred CCCccEEEEEEECCCC--CCC-eEEEEEEeCCEEEEEeCCCCCcc--ccceEEEEcCCcEEEEecccccccCCCCCcEEE
Confidence 4567999999876544 377 99999999999998886543221 1222333444444432 345545555568999
Q ss_pred EEeccC---cCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 122 LYNRLD---ESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 122 ~yn~~~---~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
|.+... ....--|+|.+.++...|+.||.-|+-
T Consensus 231 ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 231 LKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp EECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 997542 234568999999999999999999865
No 75
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.62 E-value=0.00034 Score=64.61 Aligned_cols=110 Identities=14% Similarity=0.119 Sum_probs=67.2
Q ss_pred CcCCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCC-CCccceeeeecCcceeec--------cccee
Q 005902 41 KEKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENP-GIKPIRRGVIGPTLMVEE--------LGRRR 111 (671)
Q Consensus 41 ~~~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~-~~~pir~~~i~~~~~v~d--------~Gr~~ 111 (671)
+..+++.+||||+|+...- .-.+.+|++|.+|.+.||+.+=...+ +++|+.-++-=..+..-+ +=-|+
T Consensus 3 ~~~s~vlkeGWmVH~t~~d---~~rKRHYWrLD~K~Itlf~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi 79 (129)
T 2d9z_A 3 SGSSGMVKEGWMVHYTSRD---NLRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEI 79 (129)
T ss_dssp SCCTTSEEEEEEEEEESSC---CCCEEEEEEEESSCEEEESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEE
T ss_pred CCCCceeecceEEEEccCC---ccccceeeEecCCeEEEEecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEE
Confidence 4567888999999987655 33588999999999999997643333 356666543222221111 22356
Q ss_pred eeCceEEEEEEEeccCcCcc-e-eeeccCHHHHHHHHHHHHHHHH
Q 005902 112 FNHGDVYVMRLYNRLDESKK-G-EIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 112 ~~~~~~yv~~~yn~~~~~~~-~-~laa~~~eea~~W~~a~~~a~~ 154 (671)
.-..++|...= |+...... . --....++.|..|..||+||+.
T Consensus 80 ~T~~~~y~Vge-~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 80 ITDTMVYFVGE-NNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp ECSSCEEEECB-CCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcc-CCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 66666665321 11111100 0 0112237999999999999976
No 76
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=97.50 E-value=0.00013 Score=75.86 Aligned_cols=101 Identities=15% Similarity=0.214 Sum_probs=65.0
Q ss_pred cCCcceeeeEEEEE-----ccc-cc---c-ccceeeeeEEEeCceeeeeccCCCCC------C-CCccceeeeecCccee
Q 005902 42 EKGYFEYFGWVYHM-----GTN-SI---G-HEYCHLRFLFIRGKYVEMYKRDPHEN------P-GIKPIRRGVIGPTLMV 104 (671)
Q Consensus 42 ~~~~~~~~Gw~y~~-----g~~-~~---g-~~~~~~Ryfvl~~~~l~~yK~~p~~~------~-~~~pir~~~i~~~~~v 104 (671)
..+.+.++|||++= |.. |. | +.| ++|||||+|..|.|||.+-... | ..++|+..++...
T Consensus 7 ~~~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~W-kk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a--- 82 (279)
T 3a8n_A 7 AQGTVRKAGALAVKNFLVHKKNKKVESATRRKW-KHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAV--- 82 (279)
T ss_dssp ---CCSCEEEEEEEEEEEEETTTEEECCCCCCC-EEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCC---
T ss_pred cCCceeEEEEEEEEEEecccCCcccCCccCCCC-eEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEec---
Confidence 33667899999862 221 22 3 556 9999999999999999765321 1 1244444443321
Q ss_pred ecccceeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 105 EELGRRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 105 ~d~Gr~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.|.. .+ =+||+|-+. ..+.+-|.|.|.+|+..|+.+|..|+.
T Consensus 83 ~d~~-----kK-k~vF~L~t~--~g~~yLFQA~s~eEm~~WI~aI~~a~~ 124 (279)
T 3a8n_A 83 PEHP-----KK-DFVFCLSNS--LGDAFLFQTTSQTELENWITAIHSACA 124 (279)
T ss_dssp TTSS-----SS-CSCCCEEET--TTEEEECCCSCHHHHHHHHHHHHHHHH
T ss_pred cccC-----CC-CcEEEEEcC--CCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 1211 11 147777655 456688999999999999999999987
No 77
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.44 E-value=0.00089 Score=61.63 Aligned_cols=104 Identities=16% Similarity=0.160 Sum_probs=61.6
Q ss_pred CcCCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecc-------------
Q 005902 41 KEKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEEL------------- 107 (671)
Q Consensus 41 ~~~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~------------- 107 (671)
+..+++.+||||+|++..--- .+.||++|.+|.+.||+.+=. ..|.|.+....=+.|+.-
T Consensus 3 ~~~s~vlkeGW~VH~t~~d~~---rKRHYWrLD~K~Itlf~~e~~----~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~h 75 (125)
T 2coa_A 3 SGSSGTLREGWVVHYSNKDTL---RKRHYWRLDCKCITLFQNNTT----NRYYKEIPLSEILTVESAQNFSLVPPGTNPH 75 (125)
T ss_dssp CCCCSCSEEEEEEECCSSSCC---CEEEEEEECSSEEEEESSSSC----SSCSEEEETTTCCEEEESCCCSSSCTTSCCE
T ss_pred CCCCceeecceEEEEccCCcc---ccceeeEecCCeEEEEecCCC----CceeeeeehhHeecccccccccccCCCCCCc
Confidence 445788899999998766543 389999999999999997633 334444444433333321
Q ss_pred cceeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 108 GRRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 108 Gr~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
=-|+.-...+|...= |+....+ -+=|.. .+.|..|..||++|+.
T Consensus 76 cFEi~T~~~~yyVg~-~~~~~p~-~~sg~g-~~~a~~W~~aIrqALm 119 (125)
T 2coa_A 76 CFEIVTANATYFVGE-MPGGTPG-GPSGQG-AEAARGWETAIRQALM 119 (125)
T ss_dssp EEEEECSSCCCCEEC-CSCCCSS-SCCCCC-SHHHHHHHHHHHHHGG
T ss_pred eEEEEeCCeEEEEcc-CCCCCCC-CcCccc-cHHHHHHHHHHHhhcc
Confidence 123444444333220 1111000 001112 4899999999999965
No 78
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=97.17 E-value=0.0021 Score=61.88 Aligned_cols=105 Identities=10% Similarity=0.159 Sum_probs=77.5
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceee-cccceeeeCceEEEEE
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVE-ELGRRRFNHGDVYVMR 121 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~-d~Gr~~~~~~~~yv~~ 121 (671)
...++-.+|+=..+..++.+.=.+.||||+++..|.|||.+-... ..|+-.+.+- +|.|+ |. .+..+ =|.++
T Consensus 44 t~iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~~--geP~~~I~Lr-GCEVtpDV---nva~~-Kf~Ik 116 (173)
T 4f7h_A 44 TSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESS--GTPAHQMNLR-GCEVTPDV---NISGQ-KFNIK 116 (173)
T ss_dssp GGTTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGCS--SCCSEEEECT-TCEEEEEE---ETTTT-EEEEE
T ss_pred hcChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHhc--CCCceEEecC-ceEEeccc---ccccc-ceeEE
Confidence 356678899988899999998889999999999999999887766 6787665554 44454 21 11111 24455
Q ss_pred EEeccC-cCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 122 LYNRLD-ESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 122 ~yn~~~-~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
+..+.. ..+-+-|.|.|.++=++||.|.+-|..
T Consensus 117 L~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLAsk 150 (173)
T 4f7h_A 117 LLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASK 150 (173)
T ss_dssp EEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred EeccCCCCcceeeeecCCHHHHHHHHHHhhhhcc
Confidence 555533 455677999999999999999999943
No 79
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=96.95 E-value=0.0063 Score=58.11 Aligned_cols=106 Identities=12% Similarity=0.238 Sum_probs=72.9
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEE
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~ 122 (671)
...++..+|+=..+..++.+.=.+.||||+++..|.|||.+-... ..|+-++-+-+|-.+-|. ..-+.=|.+++
T Consensus 23 t~iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~~--geP~~~inLrGCEVtPDV----nva~~Kf~ikL 96 (165)
T 4bbk_A 23 TDIPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELEQ--GEPIEKLNLRGCEIVPDV----NVSGRKFGIKL 96 (165)
T ss_dssp ---CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGTT--SCCSEEEECTTCEEEEEE----ETTTTEEEEEE
T ss_pred ccChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHhc--CCCceEEecCccEEeccc----ccccceeeEEE
Confidence 356678899988899999998889999999999999999877766 688888877774433331 11122256777
Q ss_pred EeccCc-CcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 123 YNRLDE-SKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 123 yn~~~~-~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
..+..+ ..-+-|.|.|.++=++||-|.+.|..
T Consensus 97 ~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 97 LIPVADGMNEVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp EEEETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred ecCCCCcceeeeeecCCHHHHHHHHHHhhhccc
Confidence 666542 34567999999999999999999943
No 80
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=96.93 E-value=0.021 Score=54.07 Aligned_cols=142 Identities=12% Similarity=0.027 Sum_probs=90.4
Q ss_pred EEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCCcE
Q 005902 262 KAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTY 341 (671)
Q Consensus 262 Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~dGsY 341 (671)
....+|++||++||++|.|... -++|-+.+..+++++. +++...+...+.... ++ ..+.|+..+.+ +.++ -
T Consensus 6 ~~si~I~a~~~~V~~lV~Dve~--yP~~~p~~~~~~vl~~-~~~~~~~rl~~~~~~--~G-~~~~~ts~~~~--d~~~-~ 76 (159)
T 3tl1_A 6 DNEITIAAPMELVWNMTNDIEK--WPGLFSEYASVEVLGR-DDDKVTFRLTMHPDA--DG-KVWSWVSERVA--DPVT-R 76 (159)
T ss_dssp EEEEEESSCHHHHHHHHTCGGG--HHHHCSSEEEEEEEEE-CSSEEEEEEEECCCT--TS-CCCEEEEEEEE--ETTT-T
T ss_pred EEEEEecCCHHHHHHHHHhHHH--hhhhhhCceEEEEEec-CCCEEEEEEEEEecc--Cc-eEEEEEEEEEE--cCCC-C
Confidence 3455899999999999999986 8899999999999988 455455553322221 12 24567665543 2223 1
Q ss_pred EEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHHHHHHH
Q 005902 342 TILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQV 421 (671)
Q Consensus 342 vIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~~V 421 (671)
.|..+.+.- . | ++ .+-+.|.++|++. .|+|++......++-. |.-...+...+-..+...+
T Consensus 77 ~I~~~~~~~-g-P-----f~--~l~g~W~f~p~~~-------gt~V~~~~df~~~~~~---p~~~~~~~~~~~~~~~~~L 137 (159)
T 3tl1_A 77 TVRAQRVET-G-P-----FQ--YMNIVWEYAETAE-------GTVMRWTQDFAMKPDA---PVDDAWMTDNINRNSRTQM 137 (159)
T ss_dssp EEEEEESSC-T-T-----EE--EEEEEEEEEEETT-------EEEEEEEEEEEECTTC---SSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEccC-C-C-----hh--hccCEEEEEECCC-------CEEEEEEEEEEecCCC---CCCHHHHHHHHHhhHHHHH
Confidence 233343321 1 2 22 2347899999863 5999999999988766 3111123344444555677
Q ss_pred HHHHHHHhcC
Q 005902 422 AGLKEYIGAN 431 (671)
Q Consensus 422 a~LRe~~~~~ 431 (671)
++||+.+++.
T Consensus 138 ~~lK~~~E~~ 147 (159)
T 3tl1_A 138 ALIRDRIEQA 147 (159)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 8888887653
No 81
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=96.78 E-value=0.069 Score=46.78 Aligned_cols=139 Identities=15% Similarity=0.038 Sum_probs=79.5
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCCc
Q 005902 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGT 340 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~dGs 340 (671)
+.....|++||++||++|.|... .++|.+.+..+++++.-++. ...+..+.. + ... ..|. .+.. ..+.+.
T Consensus 4 ~~~~~~i~ap~~~V~~~l~d~~~--~~~w~p~~~~~~~~~~~~~g-~~~~~~~~~---~-g~~-~~~~-~~~~-~~~~~~ 73 (147)
T 2d4r_A 4 VRAERYIPAPPERVYRLAKDLEG--LKPYLKEVESLEVVAREGAR-TRSRWVAVA---M-GKK-VRWL-EEEE-WDDENL 73 (147)
T ss_dssp EEEEEEESSCHHHHHHHHHCHHH--HGGGCTTEEEEEEEEEETTE-EEEEEEEEE---T-TEE-EEEE-EEEE-EETTTT
T ss_pred EEEEEEeCCCHHHHHHHHhChhh--hhhhcccccEEEEEEeCCCc-cEEEEEEEe---C-Cce-EEEE-EEEE-EcCCCc
Confidence 55677899999999999999885 88999998888888765433 333333331 1 111 1122 1111 122332
Q ss_pred EEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccc-cc-cchhhhHHHHH
Q 005902 341 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNS-ST-KFEKTTHFALL 418 (671)
Q Consensus 341 YvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~-~~-~~~~~~~~~mL 418 (671)
. |....+.-| . + ...+-|.++|.++ + |+|+|....+++|.+ +.. .. .+...+-..+-
T Consensus 74 ~-i~~~~~~g~---~-----~--~~~~~~~~~~~~~------g-T~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 132 (147)
T 2d4r_A 74 R-NRFFSPEGD---F-----D--RYEGTWVFLPEGE------G-TRVVLTLTYELTIPI---FGGLLRKLVQKLMQENVE 132 (147)
T ss_dssp E-EEEEEEEES---C-----S--EEEEEEEEEECSS------S-EEEEEEEEEECCCTT---TTTTTHHHHHHHHHHHHH
T ss_pred E-EEEEeccCC---h-----h--heEEEEEEEECCC------C-cEEEEEEEEecCCcc---HHHHHHHHHHHHHHHHHH
Confidence 2 222333211 1 1 1134688899764 4 999999999999865 322 11 11122223344
Q ss_pred HHHHHHHHHHhc
Q 005902 419 SQVAGLKEYIGA 430 (671)
Q Consensus 419 ~~Va~LRe~~~~ 430 (671)
..+.+|++.+++
T Consensus 133 ~~l~~lk~~~e~ 144 (147)
T 2d4r_A 133 SLLKGLEERVLA 144 (147)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 456677776665
No 82
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=96.74 E-value=0.026 Score=54.05 Aligned_cols=142 Identities=12% Similarity=0.043 Sum_probs=86.2
Q ss_pred EEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCCcE
Q 005902 262 KAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTY 341 (671)
Q Consensus 262 Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~dGsY 341 (671)
.....|++||++||++|.|... -++|.+.+..+++++.-+ +...+...+.+.. +. ..+.|...+.. +.++ -
T Consensus 6 ~~si~I~a~~~~v~~lv~Dv~~--~p~w~p~~~~~~~~~~~~-~~~~~~l~~~~~~--~G-~~~~~ts~~~~--d~~~-~ 76 (169)
T 3tvq_A 6 DNSIVVNAPFELVWDVTNDIEA--WPELFSEYAEAEILRQDG-DGFDFRLKTRPDA--NG-RVWEWVSHRVP--DKGS-R 76 (169)
T ss_dssp EEEEEESSCHHHHHHHHTCGGG--HHHHCTTEEEEEEEEEET-TEEEEEEEECCCT--TS-CCCEEEEEEEE--EGGG-T
T ss_pred EEEEEecCCHHHHHHHHHhhhH--HHHHHhheeEEEEEecCC-CEEEEEEEEEecC--CC-eEEEEEEEEEE--cCCC-c
Confidence 4456899999999999999986 889999999999998854 3222222111221 11 24456544432 2222 2
Q ss_pred EEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHHHHHHH
Q 005902 342 TILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQV 421 (671)
Q Consensus 342 vIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~~V 421 (671)
.|.++.+.-. | ++ .+-+.|.++|++. + |+|++....+.++-. |.-...+...+-..+...+
T Consensus 77 ~I~~~~l~~g---P----f~--~~~g~W~f~p~~~------g-t~V~~~~df~~~~~~---p~~~~~~~~av~~~~~~~L 137 (169)
T 3tvq_A 77 TVRAHRVETG---P----FA--YMNLHWTYRAVAG------G-TEMRWVQEFDMKPGA---PFDNAHMTAHLNTTTRANM 137 (169)
T ss_dssp EEEEEESSCT---T----EE--EEEEEEEEEEETT------E-EEEEEEEEEEECTTC---SSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCC---C----hh--heeeEEEEEECCC------C-EEEEEEEEEEecCCC---cccHHHHHHHHHhhHHHHH
Confidence 2333333221 2 22 2446899999875 4 999999999888655 2111113333444445567
Q ss_pred HHHHHHHhcC
Q 005902 422 AGLKEYIGAN 431 (671)
Q Consensus 422 a~LRe~~~~~ 431 (671)
++||+.+++.
T Consensus 138 ~~LK~~aE~~ 147 (169)
T 3tvq_A 138 ERIKKIIEDR 147 (169)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 7888887653
No 83
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=96.71 E-value=0.051 Score=49.55 Aligned_cols=113 Identities=10% Similarity=0.020 Sum_probs=77.3
Q ss_pred EEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecC---ceEEEEEEecCCcCCCCCCCCeEEEEEEEEEc
Q 005902 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDG---HYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRG 336 (671)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~---~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~ 336 (671)
.+.....|++||++||++|.|.+. -++|-+.+.+.++++.-++ +......... + +++ .+.|..-..+ .
T Consensus 3 ~~~~s~~i~ap~~~v~~~v~D~~~--~p~~~p~~~~~~v~~~~~~~g~~~~~~~~~~~--~--~~~-~~~~~~~v~~--~ 73 (148)
T 1t17_A 3 RHVVTKVLPYTPDQLFELVGDVDA--YPKFVPWITGMRTWNGRVDGAVSTVDAEAQVG--F--SFL-REKFATRVRR--D 73 (148)
T ss_dssp EEEEEEEESSCTHHHHHHHTTTTC--CSSCCSSCCCCCEEEEEEETTEEEEEEEEECS--T--TSS-CCEEEEEEEE--E
T ss_pred EEEEEEEecCCHHHHHHHHHHHhh--HHhhCCCcCeeEEEEecCCCCCceEEEEEEEE--e--cce-eEEEEEEEEE--c
Confidence 356677999999999999999986 9999999999999987652 2233333322 1 122 3446543332 2
Q ss_pred CCCcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCc
Q 005902 337 QDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC 399 (671)
Q Consensus 337 ~dGsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~ 399 (671)
. ..+.|..+++.-| -+. +-+.|.++|.++ + |+|++.+..+++|.+
T Consensus 74 ~-~~~~i~~~~~~G~----f~~------~~g~w~f~~~~~------g-t~v~~~~~~~~~~~l 118 (148)
T 1t17_A 74 K-DARSIDVSLLYGP----FKR------LNNGWRFMPEGD------A-TRVEFVIEFAFKSAL 118 (148)
T ss_dssp T-TTCEEEEEESSTT----SSC------EEEEEEEEEETT------E-EEEEEEEEECCSCHH
T ss_pred C-CCcEEEEEECCCC----hhc------cEEEEEEEECCC------C-eEEEEEEEEEECcHH
Confidence 2 2356777776531 111 347899999874 4 999999999999876
No 84
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=96.42 E-value=0.15 Score=47.98 Aligned_cols=145 Identities=13% Similarity=0.069 Sum_probs=86.6
Q ss_pred EEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCC
Q 005902 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 339 (671)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~dG 339 (671)
.+.....|++||++||++|.|.+. -++|-+.+..+++++.-++. ..+...... . +. .+-|...+. .+..+
T Consensus 6 ~v~~si~I~ap~~~V~~~v~D~~~--~p~~~P~~~~~~v~~~~~~~-~~~~~~~~~---~-G~-~~~~~s~~~--~~~~~ 75 (172)
T 3tfz_A 6 HVEHTVTVAAPADLVWEVLADVLG--YADIFPPTEKVEILEEGQGY-QVVRLHVDV---A-GE-INTWTSRRD--LDPAR 75 (172)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGGG--HHHHCSSEEEEEEEEEETTE-EEEEEEEEE---T-TE-EEEEEEEEE--EETTT
T ss_pred EEEEEEEeCCCHHHHHHHHHhHHH--HHhhCcccceEEEEecCCCE-EEEEEEEec---C-CE-EEEEEEEEE--EeCCC
Confidence 355566899999999999999986 89999999999999875433 333333221 1 11 122332222 22322
Q ss_pred cEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCcccccccc-cc---------c
Q 005902 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSS-TK---------F 409 (671)
Q Consensus 340 sYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~-~~---------~ 409 (671)
-.|..++++.+ |-++. +.+-|.++|.++ ++|+|++.+..++++-+- .... .. +
T Consensus 76 -~~i~~~~~~~~------gpf~~--~~g~w~f~~~~~------~~t~V~~~~~~~~~~~~l--~~~lg~~~~~~~~~~~~ 138 (172)
T 3tfz_A 76 -RVIAYRQLETA------PIVGH--MSGEWRAFTLDA------ERTQLVLTHDFVTRAAGD--DGLVAGKLTPDEAREML 138 (172)
T ss_dssp -TEEEEEEEECC------TTEEE--EEEEEEEEEEET------TEEEEEEEEEEEECCCCT--TSSBTTTBCHHHHHHHH
T ss_pred -CEEEEEEeeCC------CChhh--cEEEEEEEECCC------CcEEEEEEEEEEEcChhH--HHhhccccCchhhHHHH
Confidence 23455555321 22222 246788999864 579999999998775430 1111 11 2
Q ss_pred hhhhHHHHHHHHHHHHHHHhcC
Q 005902 410 EKTTHFALLSQVAGLKEYIGAN 431 (671)
Q Consensus 410 ~~~~~~~mL~~Va~LRe~~~~~ 431 (671)
...+--.+...+++||+++++.
T Consensus 139 ~~~l~~~~~~~L~~lk~~aE~~ 160 (172)
T 3tfz_A 139 EAVVERNSVADLNAVLGEAERR 160 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccHHHHHHHHHHHHHH
Confidence 2233334455788888888753
No 85
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=95.87 E-value=0.048 Score=51.20 Aligned_cols=105 Identities=10% Similarity=0.067 Sum_probs=67.6
Q ss_pred ceeeeEEEEE-ccccccccceeeeeEEEeCceeeeeccCC---CCCCCCccceeeeecCcceeecccceeeeCceEEEEE
Q 005902 46 FEYFGWVYHM-GTNSIGHEYCHLRFLFIRGKYVEMYKRDP---HENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMR 121 (671)
Q Consensus 46 ~~~~Gw~y~~-g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p---~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~ 121 (671)
...-+=+|.+ ..||.=+.=-|.|||+|=+..|=|=|--| ... .-=+|.-+=-.+..|+.-. +...-|-|+
T Consensus 13 lvc~~~l~ev~d~~K~~~kg~qqR~~FLFND~LL~TK~~~kkk~~~--~Y~vr~~~~L~gm~V~~~e----~e~~p~~~~ 86 (140)
T 3qwm_A 13 LVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSV--TYSFRQSFSLYGMQVLLFE----NQYYPNGIR 86 (140)
T ss_dssp EEEEEEEEECSCTTSCCCTTTTEEEEEEESSCEEEEECCC---CCC--CCCCEEEECCTTEEEEEEC----CSSCTTEEE
T ss_pred EEEEEeeeeeccCcccccccccceEEEEecchhhheeecccCCCCC--ceEEEEEeeecceEEEccc----CCCCceEEE
Confidence 3445556666 45666555558999999988887765222 221 2223332223334444222 223567899
Q ss_pred EEeccC---cCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 005902 122 LYNRLD---ESKKGEIACATAGEARKWMEAFDQAKQQA 156 (671)
Q Consensus 122 ~yn~~~---~~~~~~laa~~~eea~~W~~a~~~a~~~~ 156 (671)
|++..+ +..-+.++|.|.+|-.+|+++|++||+..
T Consensus 87 l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~ 124 (140)
T 3qwm_A 87 LTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEV 124 (140)
T ss_dssp EEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 998763 23448999999999999999999999943
No 86
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=95.78 E-value=0.013 Score=54.39 Aligned_cols=101 Identities=18% Similarity=0.353 Sum_probs=68.2
Q ss_pred CcCCcceeeeEEEE-EccccccccceeeeeEEEeCceeeeeccCCCCC----CCCccceeeeecCcceeecccceeeeCc
Q 005902 41 KEKGYFEYFGWVYH-MGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN----PGIKPIRRGVIGPTLMVEELGRRRFNHG 115 (671)
Q Consensus 41 ~~~~~~~~~Gw~y~-~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~----~~~~pir~~~i~~~~~v~d~Gr~~~~~~ 115 (671)
+..+...|-|.+.. .++ .+-.+.|||+|=.+.|-|.+..|... -+..|++++.|-. .||. -.
T Consensus 23 ~~lG~ii~~s~v~~~~~~----~~~~~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~~V~~---~ed~------~~ 89 (132)
T 1v61_A 23 KTLGNVIFMSQVVMQHGA----CEEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNR---LDEI------EG 89 (132)
T ss_dssp TTTCCCSCEEEEEBCCSS----SSCCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTCBCST---TCSS------SS
T ss_pred hhcCCeEEEeeEEEEEcc----cCcceEEEEEEcCCeEEEEEecCCCceEEEEEEEecceeEEEe---cccc------cc
Confidence 44455555554322 221 23458999999999999999888532 0346777655433 1221 12
Q ss_pred eEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 005902 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (671)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~ 156 (671)
.-+-|.|+-+. .+.+.++|.|.||-.+||++|..|++.|
T Consensus 90 ~~~aFeI~g~~--~~~i~v~~~s~eE~~~Wl~~L~~~i~~~ 128 (132)
T 1v61_A 90 SDCMFEITGST--VERIVVHCNNNQDFQEWMEQLNRLTKSG 128 (132)
T ss_dssp SCCCEEEECSS--SCEEEECCCCSHHHHHHHHHHHHHHTTS
T ss_pred CccEEEEecCC--CceEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence 34568888655 3779999999999999999999998844
No 87
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=95.74 E-value=0.22 Score=45.71 Aligned_cols=143 Identities=8% Similarity=-0.052 Sum_probs=80.0
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEE-EEEEEEcCCC
Q 005902 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVF-SRQWFRGQDG 339 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~-LRswRr~~dG 339 (671)
+.....|++||++||++|.|++. -++|.+.+.+.+ .+++..-..-...+. +.+ .-+|.. ++....+...
T Consensus 5 i~~~~~i~ap~e~Vw~~l~D~e~--~~~w~p~~~~~~---~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~ 74 (162)
T 2pcs_A 5 GNGSIELKGTVEEVWSKLMDPSI--LSKCIMGCKSLE---LIGEDKYKADLQIGI----AAV-KGKYDAIIEVTDIKPPY 74 (162)
T ss_dssp EEEEEEEESCHHHHHHHHTCHHH--HHHHSTTEEEEE---EEETTEEEEEEEECC----GGG-CEEEEEEEEEEEEETTT
T ss_pred EeeEEEecCCHHHHHHHhcCHHH--HHhhCCCceEeE---EeCCCeEEEEEEEEe----eeE-EEEEEEEEEEEecCCCc
Confidence 44556899999999999999885 788987654444 444443222212221 111 123432 2222334444
Q ss_pred cEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHH-HH
Q 005902 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFA-LL 418 (671)
Q Consensus 340 sYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~-mL 418 (671)
.+.+......- ++.+++ .+-|.++|..+ +.|+|+|-...+++|.+.. ....+......+ +-
T Consensus 75 ~~~~~~~~~~~------~~~~~~---~~~~~l~~~~~------~gT~v~~~~~~~~~g~l~~---~~~~l~~~~~~~~~~ 136 (162)
T 2pcs_A 75 HYKLLVNGEGG------PGFVNA---EGVIDLTPIND------ECTQLTYTYSAEVGGKVAA---IGQRMLGGVAKLLIS 136 (162)
T ss_dssp EEEEEEEEEET------TEEEEE---EEEEEEEESSS------SEEEEEEEEEEEEESGGGG---GCHHHHHHHHHHHHH
T ss_pred EEEEEEEecCC------CccEEE---EEEEEEEecCC------CcEEEEEEEEEEECCCHHH---hhHHHHHHHHHHHHH
Confidence 45544433211 233433 35688888654 5799999999999998732 221122222222 24
Q ss_pred HHHHHHHHHHhcC
Q 005902 419 SQVAGLKEYIGAN 431 (671)
Q Consensus 419 ~~Va~LRe~~~~~ 431 (671)
..+.+|++.+++.
T Consensus 137 ~~~~~lk~~~e~~ 149 (162)
T 2pcs_A 137 DFFKKIQKEIAKS 149 (162)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccc
Confidence 4567888888764
No 88
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=95.38 E-value=0.27 Score=45.50 Aligned_cols=136 Identities=11% Similarity=-0.011 Sum_probs=80.6
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCCc
Q 005902 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGT 340 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~dGs 340 (671)
+....+|++||++||++|.|... -++|.+.+.++++++ ++. |-...+.. + -.+.-|-...+++.
T Consensus 4 v~~si~I~Ap~~~VW~~l~d~~~--~~~w~p~v~~~~~~~--GG~--vR~~~~~~----G-----~~~~Erl~~~D~~~- 67 (146)
T 3f08_A 4 TTTSMEIFGSTEQVWQLIGGFNS--LPDWLPYIPSSKLTE--GGR--VRHLANPD----G-----ETIIERLEVFNDKE- 67 (146)
T ss_dssp EEEEEEESSCHHHHHHHHCSTTC--HHHHCTTCCEEEEEG--GGT--EEEEECTT----S-----CEEEEEEEEEETTT-
T ss_pred EEEEEEEeCCHHHHHHHHhcccc--HHHhCCCeEEEEEeC--CCe--EEEEEeCC----C-----CEEEEEEEEEeCCC-
Confidence 34566899999999999999886 688999999998875 233 32322221 1 13322222223332
Q ss_pred EEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHHHHHH
Q 005902 341 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQ 420 (671)
Q Consensus 341 YvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~~ 420 (671)
..+.++=++- ..| + ....+-|-+.|... +++|.|+|....++.|... . .+...+-..+-..
T Consensus 68 ~~~~y~iv~g-~~~-----~--~~~~~~~~v~p~~~-----~~gt~v~w~~~~~p~g~~~---~---~~~~~~~~~~~~~ 128 (146)
T 3f08_A 68 RYYTYSIMNA-PFP-----V--TNYLSTIQVKEGTE-----SNTSLVEWSGTFTPVAVSD---E---EAINLVHGIYSDG 128 (146)
T ss_dssp TEEEEEEEEC-SSS-----E--EEEEEEEEEEECSS-----TTCEEEEEEEEEEESSSCH---H---HHHHHHHHHHHHH
T ss_pred CEEEEEEecC-CCc-----e--eEEEEEEEEEEecC-----CCcEEEEEEEEEEeCCCCH---H---HHHHHHHHHHHHH
Confidence 3333333321 122 2 34456788899432 2579999999999977662 1 1233333444567
Q ss_pred HHHHHHHHhcC
Q 005902 421 VAGLKEYIGAN 431 (671)
Q Consensus 421 Va~LRe~~~~~ 431 (671)
+.+|++.++..
T Consensus 129 L~~Lk~~~e~~ 139 (146)
T 3f08_A 129 LKALQHAFLDL 139 (146)
T ss_dssp HHHHHHHTTC-
T ss_pred HHHHHHHHhhh
Confidence 77888877654
No 89
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=95.26 E-value=0.42 Score=44.56 Aligned_cols=112 Identities=9% Similarity=0.031 Sum_probs=70.2
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEEEe-cCCcCCCCCC-CCeEEEEEEEEEcCC
Q 005902 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTY-DPKYLTRWQS-KRDFVFSRQWFRGQD 338 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~-kp~~~P~~vs-pRDFV~LRswRr~~d 338 (671)
+.....|++||++||++|.|.+ .|-..+.+....+..+++ ...... +-.. +... ..-|+....+ ..+
T Consensus 9 v~~s~~I~ap~e~v~~lv~Dve-----~w~~~yp~~~p~~~~~~~--~~~~~~a~l~v--g~~~~~~~~~s~~~~--~~~ 77 (161)
T 3p9v_A 9 LNRDLEIPASYDEVFDLLADVP-----KSASHFPKVDKLVDLGNN--AYRWEMEKVGV--DKHAIQSVYACTYHA--DKE 77 (161)
T ss_dssp EEEEEEESSCHHHHHHHHTCHH-----HHHTTSTTEEEEEEEETT--EEEEEECCBSS--GGGCBCCEEEEEEEE--ETT
T ss_pred EEEEEEEcCCHHHHHHHHhChh-----hhHhhCCCeEEEEEcCCC--ceEEEEEEEee--eeEEEEEEEEEEEEE--cCC
Confidence 3445589999999999999865 388889999888888776 222223 2111 1222 2245443332 222
Q ss_pred CcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCc
Q 005902 339 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC 399 (671)
Q Consensus 339 GsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~ 399 (671)
+. .|..+++..| -. + .+-+.|.++|.++ +.|+|++.+..++++.+
T Consensus 78 ~~-~I~~~~~~g~---~~----~--~l~g~w~f~p~~~------g~t~V~~~~~~e~~~pl 122 (161)
T 3p9v_A 78 AG-KITWSPIKGE---GN----G--VVSGSWTLSAKGD------NATAVKFQTSAELTVPL 122 (161)
T ss_dssp TT-EEEEEECTTS---TT----E--EEEEEEEEEESSS------SCEEEEEEEEEEEEECS
T ss_pred CC-EEEEEEecCc---cc----e--eEEEEEEEEECCC------CeEEEEEEEEEEEcCcc
Confidence 32 3455555322 11 1 2236899999875 57999999999999666
No 90
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=95.20 E-value=0.34 Score=44.73 Aligned_cols=142 Identities=13% Similarity=0.018 Sum_probs=77.7
Q ss_pred EEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCC
Q 005902 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 339 (671)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~dG 339 (671)
.+.....|++|+++||+++.|+.. -++|.+.+.+++++ ++. ....+.+. +.......|. .+.....+ +
T Consensus 5 ~v~~s~~I~ap~e~V~~~~~D~e~--~p~w~p~~~~v~~~---~~~--~~~~~~~~---~~G~~~~~~~-~~v~e~~p-~ 72 (155)
T 3ggn_A 5 VVRDAVTIGKPAEQLYAVWRDLPG--LPLLMTHLRSVEVL---DDK--RSRWTVEA---PAPLGTVSWE-AELTADEP-G 72 (155)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGGG--HHHHSTTCCEEEEC---SSS--EEEEEEEC---CTTTCEEEEE-EEEEEEET-T
T ss_pred EEEEEEEEcCCHHHHHHHHhCHHH--hHHHhhhceEEEEe---cCC--eeEEEEEe---cCCcceEEEE-EEEEEecC-C
Confidence 355667899999999999999986 89999988776665 433 22333332 2111223332 22222222 3
Q ss_pred cEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCC-Ccccccccc-ccchhhhHHHH
Q 005902 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSG-WCRWKKNSS-TKFEKTTHFAL 417 (671)
Q Consensus 340 sYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKG-w~~w~p~~~-~~~~~~~~~~m 417 (671)
.. |..+++.-|. . . ..+.|.++|.++ .++|+|++.+..++.| .+. ... ..+....-..+
T Consensus 73 ~~-i~~~~~~g~~---~----~---~~g~~~F~~~~~-----~~gT~V~~~~~~~~~~~~l~---~~~~~~~~~~~~~~v 133 (155)
T 3ggn_A 73 KR-IAWRSLPGAR---I----E---NSGEVLFRPAPG-----ARGTEVVVRLTYRPPGGSAG---AVIARMFNQEPSQQL 133 (155)
T ss_dssp TE-EEEEECTTCS---S----C---EEEEEEEEECSS-----SSCEEEEEEEEEC-------------------CHHHHH
T ss_pred CE-EEEEECCCCC---c----c---eEEEEEEEECCC-----CCceEEEEEEEEECCCcHHH---HHHHHHhhhhHHHHH
Confidence 23 4556665431 1 1 235678889842 2579999999999876 442 111 22222223333
Q ss_pred HHHHHHHHHHHhcCC
Q 005902 418 LSQVAGLKEYIGANP 432 (671)
Q Consensus 418 L~~Va~LRe~~~~~~ 432 (671)
-..+.+|++++++.-
T Consensus 134 ~~~l~r~k~~~e~~~ 148 (155)
T 3ggn_A 134 RDDLMRFKREQELGL 148 (155)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhh
Confidence 456888998888753
No 91
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=94.58 E-value=1.6 Score=39.18 Aligned_cols=140 Identities=9% Similarity=-0.034 Sum_probs=73.3
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEE-EEEEEEcCCC
Q 005902 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVF-SRQWFRGQDG 339 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~-LRswRr~~dG 339 (671)
+.....|++||++||++|.|++. -++|.+.+ .-++ ++++.-.+....+. +... ..|-. ++....++..
T Consensus 15 i~~~~~i~ap~e~Vw~~l~D~~~--~~~w~p~~---~~~~-~~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~~~ 83 (157)
T 2ns9_A 15 YEGSFEVSKTPEEVFEFLTDPKR--FSRAFPGF---KSVE-VEDGSFTIELRLSL----GPLR-GDARVRASFEDLEKPS 83 (157)
T ss_dssp EEEEEEESSCHHHHHHHHTCHHH--HGGGSTTE---EEEE-EETTEEEEEEEEES----SSSE-EEEEEEEEEEEEETTT
T ss_pred EeeEEEEcCCHHHHHHHHcCHHH--HHhhCCCc---eEEE-ECCCEEEEEEEEEE----ccee-EEEEEEEEEEecCCCc
Confidence 45556899999999999999875 78898865 3444 55553222222211 1121 12321 1221223333
Q ss_pred cEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHH-HHH
Q 005902 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHF-ALL 418 (671)
Q Consensus 340 sYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~-~mL 418 (671)
.+.+...... . .+-+. ...-|.++|.+ ++|+|++-...+++|.+. .....+...+.. .+-
T Consensus 84 ~i~~~~~~~~---~---~~~~~---~~~~~~l~~~~-------~gT~v~~~~~~~~~g~l~---~~~~~~~~~~~~~~~~ 144 (157)
T 2ns9_A 84 KATVKGSGRG---A---GSTLD---FTLRFAVEPSG-------GGSRVSWVFEGNVGGLAA---SMGGRVLDSLARRMIN 144 (157)
T ss_dssp EEEEEEEEEC---S---SEEEE---EEEEEEEEEET-------TEEEEEEEEEEEEEEGGG---GSCHHHHHHHHHHHHH
T ss_pred EEEEEEEecC---C---CccEE---EEEEEEEEeCC-------CcEEEEEEEEEEECcCHH---HhhHHHHHHHHHHHHH
Confidence 3333222111 0 01122 23568888865 469999999999998762 222112222222 233
Q ss_pred HHHHHHHHHHhc
Q 005902 419 SQVAGLKEYIGA 430 (671)
Q Consensus 419 ~~Va~LRe~~~~ 430 (671)
..+.+|++.+++
T Consensus 145 ~~~~~lk~~~e~ 156 (157)
T 2ns9_A 145 DVISGVKRELGE 156 (157)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHhc
Confidence 455677766653
No 92
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=94.39 E-value=0.15 Score=48.48 Aligned_cols=90 Identities=17% Similarity=0.158 Sum_probs=63.8
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~y 123 (671)
..+.+.|-|.. +++ -|.++|.|+|.....-||- +|... +-=.-+.++.+|+|+ ..+.+.|+|
T Consensus 50 e~Ilk~G~v~K--rkG---l~~kkR~liLT~~PrL~Yv-dp~~~---~~KGeIpls~~l~ve-----~k~~~~F~I---- 111 (151)
T 1w1g_A 50 NLILKMGPVDK--RKG---LFARRRQLLLTEGPHLYYV-DPVNK---VLKGEIPWSQELRPE-----AKNFKTFFV---- 111 (151)
T ss_dssp CCEEEEEEEEE--EET---TEEEEEEEEEETTTEEEEE-ETTTT---EEEEEECCCTTCEEE-----ESSSSEEEE----
T ss_pred CcEEEEEEEEe--ccc---CcceeEEEEEcCCceEEEE-cCccc---cccceEecCCCeeEE-----EcCCCEEEE----
Confidence 45669999988 233 4469999999988887776 45433 111234566899999 444454444
Q ss_pred eccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 124 n~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
...++.+.|.+. ..+|..|+.||++|+.
T Consensus 112 --~Tp~RtY~~~d~-~~~AqeWv~aI~~~~~ 139 (151)
T 1w1g_A 112 --HTPNRTYYLMDP-SGNAHKWCRKIQEVWR 139 (151)
T ss_dssp --EETTEEEEEECT-TSCHHHHHHHHHHHHH
T ss_pred --ECCCceEEEEcC-ccCHHHHHHHHHHHHH
Confidence 334588888886 8899999999999976
No 93
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=92.75 E-value=0.37 Score=43.97 Aligned_cols=99 Identities=9% Similarity=0.139 Sum_probs=61.3
Q ss_pred eEEEEEccccccccceeeeeEEEeCceeeeecc-CCCCC---CCCc---cceeeeecCcceeecccceeeeCceEEEEEE
Q 005902 50 GWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKR-DPHEN---PGIK---PIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 50 Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~-~p~~~---~~~~---pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~ 122 (671)
.+|-++++++. .+.|||+|......+|.. +|... ++.+ =|+....|..+.+-.+-++..... +-|+|
T Consensus 17 t~l~K~~~~~~----~k~r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~--~~FsI 90 (131)
T 1mai_A 17 SQLLKVKSSSW----RRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPED--RCFSI 90 (131)
T ss_dssp EEEEEESSSSC----EEEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGG--GEEEE
T ss_pred CeEEEECCCCc----ceeEEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCcc--ceEEE
Confidence 46777776653 257999998766555542 33211 1223 356666777665532222222211 25555
Q ss_pred EeccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 123 yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
.-..+ .+-+.|.|.|.+||..|+..|+..+..
T Consensus 91 iy~~~-~k~LdlvA~s~~e~~~Wv~gL~~L~~~ 122 (131)
T 1mai_A 91 VFKDQ-RNTLDLIAPSPADAQHWVQGLRKIIHH 122 (131)
T ss_dssp EESSS-CCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred EECCC-CceEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 55433 678999999999999999999988763
No 94
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=92.48 E-value=0.91 Score=41.21 Aligned_cols=139 Identities=11% Similarity=-0.001 Sum_probs=76.5
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCce-EEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCC
Q 005902 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 339 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~t-DIvY~~~kp~~~P~~vspRDFV~LRswRr~~dG 339 (671)
+.....|++||++||++|.|... -++|.+.+.++++++.=++.. .+....++ ... .+.-+-...++.+
T Consensus 4 v~~si~I~ap~e~Vw~~l~d~~~--~~~w~p~v~~~~~~~g~~~~~G~~r~~~~~-----~G~----~~~e~i~~~d~~~ 72 (151)
T 2le1_A 4 LRRSVEVAAPAADVWTLVGDFSA--IHRWHPQVSAPTLRGASPHTPGAERVFGAG-----TEE----ELVERLVERDESA 72 (151)
T ss_dssp EEEEEEESSCHHHHHHHHTTSGG--GGGTCTTCCCEEEESSCTTSTTCEEEESSS-----SSS----CEEEEEEEEETTT
T ss_pred EEEEEEecCCHHHHHHHHhCcCc--HHHhcCCceEEEEECCCCCCCCeEEEEEeC-----CCC----EEEEEEEEEeCCC
Confidence 44566899999999999999875 689999988887765321111 12222111 111 2222222223322
Q ss_pred cEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeec--CCCccccccccccchhhhHHHH
Q 005902 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHS--SGWCRWKKNSSTKFEKTTHFAL 417 (671)
Q Consensus 340 sYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDl--KGw~~w~p~~~~~~~~~~~~~m 417 (671)
..+.++-+.-+ .| ++. ..+-|.+.|.++ ++|+|+|-...++ .|-... .+. .+-..+
T Consensus 73 -~~~~~~~~~g~-~~-----~~~--~~~~~~l~~~~~------~gt~v~w~~~f~~~p~~~~~~------~~~-~~~~~~ 130 (151)
T 2le1_A 73 -RRLVYTMPDPP-FP-----ITN--HRAVLEVVPRDD------RHCTVVWTAMFDCSPETAREL------ESV-IGDGVF 130 (151)
T ss_dssp -TEEEEEEEECS-SS-----EEE--EEEEEEEEESSS------SCEEEEEEEEEEECHHHHHHH------HHH-TTTTHH
T ss_pred -CEEEEEEecCC-CC-----cee--EEEEEEEEECCC------CcEEEEEEEEEEecCCCCCHH------HHH-HHHHHH
Confidence 22333333221 11 222 245688888543 5799999999987 433211 111 111223
Q ss_pred HHHHHHHHHHHhcCC
Q 005902 418 LSQVAGLKEYIGANP 432 (671)
Q Consensus 418 L~~Va~LRe~~~~~~ 432 (671)
-..+++|+.+++.+.
T Consensus 131 ~~~L~~Lk~~~e~~~ 145 (151)
T 2le1_A 131 AVGLNALAERYGRLE 145 (151)
T ss_dssp HHHHHHHHHHTTTTS
T ss_pred HHHHHHHHHHhhccc
Confidence 456778888877764
No 95
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=91.76 E-value=2.8 Score=39.03 Aligned_cols=36 Identities=3% Similarity=0.140 Sum_probs=29.8
Q ss_pred EEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceE
Q 005902 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLE 297 (671)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~e 297 (671)
.+.....|+|+|++|+++|.|+.. -++|++.+.+++
T Consensus 19 ~i~~si~I~Appe~VW~~ltD~~~--~~~W~p~v~~~~ 54 (155)
T 3ijt_A 19 KFSFELAVNTKKEDAWTYYSQVNQ--WFVWEGDLEQIS 54 (155)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGGG--GGGTSTTEEEEE
T ss_pred EEEEEEEEcCCHHHHHHHHhCccc--ccccchhhEeee
Confidence 455566899999999999999885 889999876554
No 96
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=91.74 E-value=4.6 Score=37.91 Aligned_cols=139 Identities=13% Similarity=0.008 Sum_probs=79.6
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCce-EEEEeecCc-eEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCC
Q 005902 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDL-ELVDSYDGH-YDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 338 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~-eVVE~lD~~-tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~d 338 (671)
+....+|++||++||.+|.|... - .|.+.+.++ ++++--+++ ..-+... . + .+.-|--..+++
T Consensus 4 v~~si~I~Ap~~~VW~~v~Df~~--~-~w~P~v~~s~e~~eg~~~~~vGsvR~~-g-----g------~v~Erl~~~D~~ 68 (160)
T 3p51_A 4 VYNSIVVDAPVERVWSRIRNFHD--F-SWAPSLIKSCKKVGGGGGYSVGARRLL-N-----G------EFLDTLIAYSEI 68 (160)
T ss_dssp EEEEEEESSCHHHHHHHHCCTTC--C-TTCTTTCCCEEEESSCCTTCTTCEEEE-T-----T------TEEEEEEEEETT
T ss_pred EEEEEEECCCHHHHHHHHhCcCC--C-eEccCceEEEEEEecCCCCCCCCEEEE-C-----C------EEEEEEEEEcCC
Confidence 34566899999999999999886 5 999999888 776543211 1112211 1 1 221111122332
Q ss_pred CcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHHHH
Q 005902 339 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALL 418 (671)
Q Consensus 339 GsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL 418 (671)
. ..+.++=++- ..|..++.++.. .+-+-+.|.+. .++|.|+|.+..++.+-. ....+-..+-
T Consensus 69 ~-~~~sY~ii~g-~l~~~~~~~~~y--~~~~~v~p~~~-----~ggt~V~w~~~~~~~~~~---------~~~~~~~~~~ 130 (160)
T 3p51_A 69 E-RRIMYSMDEG-PSPVSSGEIYNY--VGNLHLLPVTI-----DDTTFVEWSGSWESASTE---------AVEYMNTVYR 130 (160)
T ss_dssp T-TEEEEEEEEC-STTSSTTTEEEE--EEEEEEEEETT-----TTEEEEEEEEEEEESCSH---------HHHHHHHHHH
T ss_pred C-cEEEEEEecC-CCcccccceeEE--EEEEEEEEecC-----CCCEEEEEEEEEEeCHHH---------HHHHHHHHHH
Confidence 2 2233332332 233222234433 46788999862 268999999999997521 1222333445
Q ss_pred HHHHHHHHHHhcCC
Q 005902 419 SQVAGLKEYIGANP 432 (671)
Q Consensus 419 ~~Va~LRe~~~~~~ 432 (671)
..+++|++.++...
T Consensus 131 ~~L~~Lk~~~e~~~ 144 (160)
T 3p51_A 131 SLLADLAAEFTSES 144 (160)
T ss_dssp HHHHHHHHHSCTTT
T ss_pred HHHHHHHHHHhhcc
Confidence 57788888887643
No 97
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=91.25 E-value=2 Score=46.01 Aligned_cols=114 Identities=17% Similarity=0.225 Sum_probs=72.5
Q ss_pred cCCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecc--cce-eeeCceEE
Q 005902 42 EKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEEL--GRR-RFNHGDVY 118 (671)
Q Consensus 42 ~~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~--Gr~-~~~~~~~y 118 (671)
......++|.+..+... -|. .+.|||+|=..+|=+=|++.... ...-.|.-+=-.++.|+|. |.. ..+...-+
T Consensus 253 ~~r~Li~~G~l~~~~~~-~~k--~~~r~~fLF~d~Ll~~k~~~~~~-~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~ 328 (402)
T 2dfk_A 253 RSSELIYTGEMAWIYQP-YGR--NQQRVFFLFDHQMVLCKKDLIRR-DILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKN 328 (402)
T ss_dssp TCCCEEEEEEEEEESST-TCC--CEEEEEEEETTEEEEEEECSSCT-TCEEEEEEEEGGGEEEEECCSEECSSSCCEESS
T ss_pred cccceEEeceEEEEecc-CCc--eEEEEEEeeCCEEEEEEeccccC-CceEEeeeeeccceEEEecCCCCccccccccce
Confidence 34567799999887542 122 36799999998887777653222 1222333333345666653 321 11112235
Q ss_pred EEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHHHHHHH
Q 005902 119 VMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQAEVEL 160 (671)
Q Consensus 119 v~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~~~~~ 160 (671)
.|.|+++.. ...+.|.|.|.+|-..|+++|++|+.+...+-
T Consensus 329 ~F~i~~~~~-~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~~~ 369 (402)
T 2dfk_A 329 AFKLHNKET-EEVHLFFAKKLEEKIRWLRAFREERKMVQEDE 369 (402)
T ss_dssp EEEEEESSS-SCEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCC-CeEEEEEeCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 788887653 56889999999999999999999999544433
No 98
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=90.42 E-value=1.5 Score=46.00 Aligned_cols=112 Identities=15% Similarity=0.130 Sum_probs=71.3
Q ss_pred CCcceeeeEEEEEccccccc--------cceeeeeEEEeCceeeeeccCCCCCC-----CCccceeeeecCcceeecccc
Q 005902 43 KGYFEYFGWVYHMGTNSIGH--------EYCHLRFLFIRGKYVEMYKRDPHENP-----GIKPIRRGVIGPTLMVEELGR 109 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~--------~~~~~Ryfvl~~~~l~~yK~~p~~~~-----~~~pir~~~i~~~~~v~d~Gr 109 (671)
.+...++|.+..+..++-|. .=.+.||++|=..+|=+=|++....+ ..--.|.-+--.++.|+|.-.
T Consensus 207 ~g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~ 286 (353)
T 1kz7_A 207 LGKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVK 286 (353)
T ss_dssp GCCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBT
T ss_pred hhhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCC
Confidence 34577999988664444441 22468999998888877776643210 111233333345566665421
Q ss_pred eeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHHHHHHH
Q 005902 110 RRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQAEVEL 160 (671)
Q Consensus 110 ~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~~~~~ 160 (671)
+.-+.|.|+... ....+.|.|.|.+|-..|+++|++|+.++...+
T Consensus 287 -----~~~~~F~i~~~~-~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~~ 331 (353)
T 1kz7_A 287 -----GDTKKFEIWYNA-REEVYIIQAPTPEIKAAWVNAIRKVLTSQLQAC 331 (353)
T ss_dssp -----TBTTEEEEEETT-TTEEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCceEEEEECC-CCcEEEEECCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 112356777643 356789999999999999999999999554444
No 99
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=90.41 E-value=2.5 Score=45.93 Aligned_cols=109 Identities=15% Similarity=0.233 Sum_probs=71.6
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecc--cce-eeeCceEEE
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEEL--GRR-RFNHGDVYV 119 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~--Gr~-~~~~~~~yv 119 (671)
.....++|.+..+...+ |. .+.|||+|=..+|=+=|++.... ...-.|.-+--.++.|+|. |.. ..+...-+.
T Consensus 331 ~r~li~~G~l~~~~~~~-~~--~~~r~~fLF~d~Ll~~k~~~~~~-~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~ 406 (466)
T 2pz1_A 331 SSELIYSGELTRVTQPQ-AK--SQQRMFFLFDHQLIYCKKDLLRR-DVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNA 406 (466)
T ss_dssp CSCEEEEEEEEEECTTT-CC--EEEEEEEEETTEEEEEEECSSCT-TCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEE
T ss_pred cceeEEeeeEEEEecCC-CC--eeEEEEEEECCEEEEEEeccccC-CceEEeeeeeccceEEEeCCCCccccccccccee
Confidence 34677999998875421 21 46799999998887777653222 1222333333455666643 221 122233478
Q ss_pred EEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 005902 120 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (671)
Q Consensus 120 ~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~ 156 (671)
|.|+++.. .+.+.|.|.|.+|-..|+++|++|+.+.
T Consensus 407 F~i~~~~~-~~~~~l~a~s~~eK~~W~~~i~~a~~~~ 442 (466)
T 2pz1_A 407 FRLHRGAT-GDSHLLCTRKPEQKQRWLKAFAREREQV 442 (466)
T ss_dssp EEEECSSS-CCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCC-CeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 99998753 5678999999999999999999998843
No 100
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=90.06 E-value=1.6 Score=45.74 Aligned_cols=104 Identities=8% Similarity=0.153 Sum_probs=63.1
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCC--------------CCCCccceeeeecCcceeeccc
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHE--------------NPGIKPIRRGVIGPTLMVEELG 108 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~--------------~~~~~pir~~~i~~~~~v~d~G 108 (671)
.....++|.+.....+ .-.+.||++|=..+|=+-|++... .+ ..-.+..+--.++.|+|..
T Consensus 250 ~R~li~~G~l~~~~~~----~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~-~~~~~~~i~l~~~~v~~~~ 324 (368)
T 1xcg_A 250 TRKMIHEGPLTWRISK----DKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDS-KQTFSPVLKLNAVLIRSVA 324 (368)
T ss_dssp GSCEEEEEEEEECCSS----SCCCEEEEEEESSEEEEEEECSSCEECCC--------------CCCSEEEGGGEEEEECS
T ss_pred cceEEeecceEeeecC----CCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCc-ccCcCCceEccceeeeccc
Confidence 4567799999864332 224689999988888777765321 00 0011222223345566541
Q ss_pred ceeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 109 RRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 109 r~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
- ..+.+++++.- ...+...+.|.|.|.+|-..|+++|++|++.
T Consensus 325 ~---~~~~f~i~~~~-~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 325 T---DKRAFFIICTS-KLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp S---CSSEEEEEECC-SSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred C---CCceEEEEEec-CCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 1 12345544321 1133578999999999999999999999874
No 101
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=89.79 E-value=0.68 Score=49.75 Aligned_cols=97 Identities=10% Similarity=0.135 Sum_probs=61.5
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~y 123 (671)
....++|.++.+...+ .+.|||+|=..+|=+-|.+... .-=+|..+=-.++.|++ ...+..-+.|.|.
T Consensus 242 r~li~~g~l~~~~~~~-----~~~r~~fLF~d~Ll~~k~~~~~---~y~~k~~i~L~~l~v~~----~~~~~~~~~f~i~ 309 (434)
T 3mpx_A 242 REFLKEGTLMKVTGKN-----RRPRHLFLMNDVLLYTYPQKDG---KYRLKNTLAVANMKVSR----PVMEKVPYALKIE 309 (434)
T ss_dssp CCEEECCEEEEEETTE-----EEEEEEEEESSEEEEEEECTTS---CEEEEEEEEC-----CC----CCCTTSCSEEEEE
T ss_pred cceEecceEEEEeCCC-----ceEEEEEEECCEEEEEEecCCC---eEEEEEEEEcCCcEEEe----cCCCCCCeeEEEe
Confidence 4557999998876443 3789999999999888855321 22223333334455542 1223344667775
Q ss_pred eccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 124 n~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
++ .+.+.|.|.|.+|...|+++|++||++
T Consensus 310 ~~---~~~~~l~a~s~~ek~~W~~~i~~ai~e 338 (434)
T 3mpx_A 310 TS---ESCLMLSASSCAERDEWYGCLSRALPE 338 (434)
T ss_dssp CS---SCEEEEECSSHHHHHHHHHHHHHC---
T ss_pred cC---CeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 53 457999999999999999999999983
No 102
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=88.27 E-value=3.1 Score=44.32 Aligned_cols=105 Identities=18% Similarity=0.151 Sum_probs=66.5
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeeccccee-eeCceEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRR-FNHGDVYVMRL 122 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~-~~~~~~yv~~~ 122 (671)
+...++|.+......+ .. .+.||++|=..+|=+-|++. + .--+|.-+--..+.|+|..-.. -+...-+.|.|
T Consensus 232 grli~~G~l~~~~~~~--~~-~~~~~~fLF~d~Ll~~k~k~--~--~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i 304 (406)
T 2vrw_B 232 GRPKIDGELKITSVER--RS-KTDRYAFLLDKALLICKRRG--D--SYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLL 304 (406)
T ss_dssp CSEEEEEEEEEECSSC--CS-CEEEEEEEESSEEEEEEEET--T--EEEEEEEEETTTEEEEC--------CTTCEEEEE
T ss_pred CcccccccEEEEecCC--Cc-cceEEEEecCCEEEEEEecC--C--ceEEEEEecccceeeeecCCCCccCCccceeeEE
Confidence 4466899988764322 11 37899999888887777652 1 2223433334556666532211 11223467777
Q ss_pred EeccCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 005902 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (671)
Q Consensus 123 yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~ 156 (671)
.+... .+.++|.|.|.+|-.+|+++|++|+.++
T Consensus 305 ~~~~~-~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 337 (406)
T 2vrw_B 305 IEDQG-AQGYELFFKTRELKKKWMEQFEMAISNI 337 (406)
T ss_dssp EETTC-SCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EecCC-CceEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 76533 4569999999999999999999999843
No 103
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=86.64 E-value=8.1 Score=36.21 Aligned_cols=33 Identities=9% Similarity=0.023 Sum_probs=29.6
Q ss_pred EEEEeecCCHHHHHHHHHccCCcccccccCCCCce
Q 005902 262 KAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDL 296 (671)
Q Consensus 262 Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~ 296 (671)
.....|++||++||+++.|++. -++|-+.+.+.
T Consensus 30 ~~si~I~ap~eeVy~~~~D~e~--lP~W~~~l~~~ 62 (156)
T 2qpv_A 30 IIHLSVEKPWAEVYDFAANPGN--MPRWAAGLAGG 62 (156)
T ss_dssp EEEEEESSCHHHHHHHHHCGGG--GGGTCGGGTTC
T ss_pred EEEEEEcCCHHHHHHHHHChhh--HHHHHHhhhhh
Confidence 5566899999999999999986 99999999885
No 104
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=86.34 E-value=3.1 Score=46.48 Aligned_cols=105 Identities=16% Similarity=0.174 Sum_probs=64.4
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCC------------CCCcccee-eeecCcceeecccc
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN------------PGIKPIRR-GVIGPTLMVEELGR 109 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~------------~~~~pir~-~~i~~~~~v~d~Gr 109 (671)
.....++|.+.....+. =.+.|||+|=..+|=+-|++.... +....+.+ .+=-.++.|+|..-
T Consensus 409 ~R~LI~eG~l~~~~~~~----k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~ 484 (536)
T 3odw_A 409 KKKLVHEGPLTWRVTKD----KAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVAT 484 (536)
T ss_dssp TSCEEEEEEEEEESCC-------CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEECTT
T ss_pred cceeeeecceEEEecCC----CeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeecccc
Confidence 46677999997765322 136899999888888877654210 00000111 12233456666432
Q ss_pred eeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 005902 110 RRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (671)
Q Consensus 110 ~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~ 156 (671)
+ .+.+|++... ......++|.|.|.+|-..||++|++||+++
T Consensus 485 d---~~~ffli~~~--~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~ 526 (536)
T 3odw_A 485 D---HKAFYVLFTW--DQEAQIYELVAQTVSERKNWCALITETAGSL 526 (536)
T ss_dssp C---TTEEEEEEC-----CCCEEEEECSSHHHHHHHHHHHHHHHHTS
T ss_pred c---CCceEEEecC--CCCceEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence 2 3456665433 2345678999999999999999999999943
No 105
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=86.08 E-value=2.7 Score=44.11 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=62.7
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCC------------CCCccceeeeec-Ccceeecccce
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN------------PGIKPIRRGVIG-PTLMVEELGRR 110 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~------------~~~~pir~~~i~-~~~~v~d~Gr~ 110 (671)
....++|.+......+ =.+.|||+|=..+|=+-|++.... ++.....+.+|. .++.|+|..-+
T Consensus 257 r~li~eG~l~~~~~~~----~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~~ 332 (377)
T 3p6a_A 257 KKLVHEGPLTWRVTKD----KAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD 332 (377)
T ss_dssp SCEEEEEEEEEESSSS----CEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEEECTTC
T ss_pred ceEEEECCcEEEecCC----CeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhccccccc
Confidence 4677999997654332 237899999888888877664210 000000111222 34455543222
Q ss_pred eeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 111 RFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 111 ~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.+.+|+. +........++|.|.|.+|-..|++.|++|++
T Consensus 333 ---~~~~~~i--~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~ 371 (377)
T 3p6a_A 333 ---HKAFYVL--FTWDQEAQIYELVAQTVSERKNWCALITETAG 371 (377)
T ss_dssp ---TTEEEEE--ETTCTTCCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ---cceeEEE--ecCCCCCeeEEEecCCHHHHHHHHHHHHHHHH
Confidence 2234443 33334567789999999999999999999988
No 106
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=86.04 E-value=19 Score=33.47 Aligned_cols=149 Identities=12% Similarity=0.054 Sum_probs=83.0
Q ss_pred EEEEeecCCHHHHHHHHH-ccCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCCc
Q 005902 262 KAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGT 340 (671)
Q Consensus 262 Ka~gvVdaspe~Vfe~L~-d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~dGs 340 (671)
..+..|++||+++|.++. |... ..+.|-+.+.+++++|-=.+.-.|.+..+.+. .+. -++.-|--..+ +..
T Consensus 6 ~~e~~i~a~a~kvw~~~~~d~~~-~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~~G-----~~~-~~~kErl~~~D-~~~ 77 (157)
T 1tw0_A 6 RDETSSSVAPAKLYKALTKDSDT-IAQKIDGPIQSIELVEGNGGVGTIKKITANEG-----DKT-SFVLQKVDAID-EAN 77 (157)
T ss_dssp EEEEEESSCHHHHHHHHHHTGGG-GGGGSCSSEEEEEEEESSSSTTCEEEEEEEET-----TEE-EEEEEEEEEEE-TTT
T ss_pred EEEEEecCCHHHHHHHHhcCcch-hhhhHHhhccEEEEEeCCCCCCeEEEEEeeCC-----Ccc-ceEEEEEEEEe-ccC
Confidence 345588999999999988 8875 46888888888888876222223555444321 110 12222222122 333
Q ss_pred EEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHHHHHH
Q 005902 341 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQ 420 (671)
Q Consensus 341 YvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~~ 420 (671)
..+.++-++-+-.|- + + +...+-+-+.|.+. +.|.++|.+..++++-.. + .+...+.+...+...
T Consensus 78 ~~~~y~iieGd~~~~--~-~--~~~~~~~~v~~~~~------~gs~v~w~~~y~~~~~~~--~--~~~~~~~~~~~~~~~ 142 (157)
T 1tw0_A 78 LGYDYSIVGGTGLPE--S-L--EKLSFETKVVAGSG------GGSISKVTLKFHTKGDAP--L--SDAVRDDALAKGAGF 142 (157)
T ss_dssp TEEEEEEEECTTSCT--T-E--EEEEEEEEEEECSS------SSEEEEEEEEEEESTTCC--C--CHHHHHHHHHHHHHH
T ss_pred CEEEEEEEecCCCcc--c-e--EEEEEEEEEEecCC------CCEEEEEEEEEEECCCCC--C--CHHHHHHHHHHHHHH
Confidence 444444454432221 1 1 23345667778543 459999999999887551 1 111111122233445
Q ss_pred HHHHHHHHhcCCC
Q 005902 421 VAGLKEYIGANPA 433 (671)
Q Consensus 421 Va~LRe~~~~~~~ 433 (671)
..+|.+|+-++|.
T Consensus 143 ~k~ie~yll~~p~ 155 (157)
T 1tw0_A 143 FKAIEGYVLANPA 155 (157)
T ss_dssp HHHHHHHHHHCGG
T ss_pred HHHHHHHHHhCcc
Confidence 6778888877653
No 107
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=85.72 E-value=5 Score=41.08 Aligned_cols=107 Identities=12% Similarity=0.090 Sum_probs=65.2
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCC-CccceeeeecCcceeecccceeeeCceEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPG-IKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~-~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~ 122 (671)
+...+.|.+.......++.. .+.||++|=...|=+=|++...... ..-.|.-+--.++.|+|.- .| .-+.|.|
T Consensus 201 g~li~~~~~~~~~~~~~~~~-~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~----~~-~~~~F~i 274 (311)
T 1nty_A 201 GELILQESFQVWDPKTLIRK-GRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHV----EG-DPCKFAL 274 (311)
T ss_dssp CCEEEEEEEEEECSSSSSCC-EEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCC----TT-CTTEEEE
T ss_pred CCceeeeeEEEEcCcccccc-cceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEcc----CC-CCceEEE
Confidence 45567787766543322222 3789999988888776655322101 1112333334566676531 11 1134666
Q ss_pred Eecc--CcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 005902 123 YNRL--DESKKGEIACATAGEARKWMEAFDQAKQQA 156 (671)
Q Consensus 123 yn~~--~~~~~~~laa~~~eea~~W~~a~~~a~~~~ 156 (671)
+... .....+.|.|.|.+|-..|+++|++||+|+
T Consensus 275 ~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~ 310 (311)
T 1nty_A 275 WVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER 310 (311)
T ss_dssp EESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence 6532 235678999999999999999999999853
No 108
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=85.38 E-value=5.1 Score=42.26 Aligned_cols=106 Identities=8% Similarity=0.102 Sum_probs=65.0
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCC------------CC-CccceeeeecCcceeecccc
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN------------PG-IKPIRRGVIGPTLMVEELGR 109 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~------------~~-~~pir~~~i~~~~~v~d~Gr 109 (671)
.....++|.+.....+ + =...||++|=..+|=+-|++.... ++ ..-+|..+--.++.|+|..-
T Consensus 254 ~R~li~eG~l~~~~~~--~--~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~ 329 (385)
T 1txd_A 254 KRKMIHEGPLVWKVNR--D--KTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVAT 329 (385)
T ss_dssp GSCEEEEEEEEEESSS--S--CBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC
T ss_pred cceEEEECcEEEEcCC--C--CeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceeccccccccccc
Confidence 4567799999764322 1 236799999888887766543110 00 00112222234556665421
Q ss_pred eeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHHHH
Q 005902 110 RRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQAE 157 (671)
Q Consensus 110 ~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~~ 157 (671)
..+.+|++.+. ......++|.|.|.+|-..|+++|++|++++.
T Consensus 330 ---d~~~~f~i~~~--~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~ 372 (385)
T 1txd_A 330 ---DNKALFVISMS--DNGAQIYELVAQTVSEKTVWQDLICRMAASVK 372 (385)
T ss_dssp ----CCEEEEEEEC--SSCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCceEEEEEEc--CCCceEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 12456666543 23356789999999999999999999999543
No 109
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=84.74 E-value=12 Score=34.77 Aligned_cols=148 Identities=9% Similarity=0.037 Sum_probs=85.2
Q ss_pred EEEEeecCCHHHHHHHHH-ccCCcccccccC-CCCceEEEEeecC-ceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCC
Q 005902 262 KAVGVIDASADTVFEVVL-NLERHQRYEWDM-LTGDLELVDSYDG-HYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 338 (671)
Q Consensus 262 Ka~gvVdaspe~Vfe~L~-d~~~~~R~eWD~-~~~~~eVVE~lD~-~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~d 338 (671)
..+..|++||+++|.++. |... ..+.|-+ .+.+++++|- |+ .-.|.+..+.+. ++=-++.-|--..+ +
T Consensus 6 ~~e~~i~ap~~~vw~~~~~d~~~-~~pk~~P~~i~s~~~~eG-dgg~Gsvr~~~~~~G------~~~~~~kErl~~~D-~ 76 (159)
T 1e09_A 6 ESEFTSEIPPPRLFKAFVLDADN-LVPKIAPQAIKHSEILEG-DGGPGTIKKITFGEG------SQYGYVKHKIDSID-K 76 (159)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHH-HHHHHCTTTEEEEEEEES-SSSTTCEEEEEECCS------SSCEEEEEEEEEEE-T
T ss_pred EEEEEecCCHHHHHHHHhcCccc-cchhhChhhccEEEEEeC-CCCCceEEEEEecCC------CCceEEEEEEEEEc-C
Confidence 345588999999999998 8764 3689998 5688888876 32 223555554421 11013333322223 3
Q ss_pred CcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHHHH
Q 005902 339 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALL 418 (671)
Q Consensus 339 GsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL 418 (671)
....+.++-++-+-.+ .- -+...+-+-+.|.++ +.|.++|.+..+.++-.. +. +.-.+.....+.
T Consensus 77 ~~~~~~y~iieG~~~~---~~--~~~~~~~~~v~~~~~------~gs~v~wt~~y~~~~~~~--~~--~~~~~~~~~~~~ 141 (159)
T 1e09_A 77 ENYSYSYTLIEGDALG---DT--LEKISYETKLVASPS------GGSIIKSTSHYHTKGNVE--IK--EEHVKAGKEKAS 141 (159)
T ss_dssp TTTEEEEEECCCTTTG---GG--EEEEEEEEEECCCTT------SSEEEEEEEEEEECSSCC--CC--HHHHHHHHHHHH
T ss_pred CCCEEEEEEEecccCc---cc--ceEEEEEEEEEecCC------CCEEEEEEEEEEECCCCC--CC--HHHHHHHHHHHH
Confidence 3456666666543221 00 123345566667543 469999999999886551 11 111112233445
Q ss_pred HHHHHHHHHHhcCCC
Q 005902 419 SQVAGLKEYIGANPA 433 (671)
Q Consensus 419 ~~Va~LRe~~~~~~~ 433 (671)
....+|.+|+-+++.
T Consensus 142 ~~~k~ie~yll~~~~ 156 (159)
T 1e09_A 142 NLFKLIETYLKGHPD 156 (159)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhChh
Confidence 566788888888765
No 110
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=83.97 E-value=4.9 Score=45.22 Aligned_cols=104 Identities=18% Similarity=0.125 Sum_probs=68.3
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeeccccee-eeCceEEEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRR-FNHGDVYVMRL 122 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~-~~~~~~yv~~~ 122 (671)
+...++|.+......+ .=.+.|||+|=..+|=+-|++. . ..=+|..+=-.++.|++.--.. -....-+.|.|
T Consensus 404 grll~~G~l~~~~~~~---~~~~~r~~fLF~d~Ll~~k~~~--~--~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i 476 (587)
T 3ky9_A 404 GRPKIDGELKITSVER---RSKMDRYAFLLDKALLICKRRG--D--SYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLL 476 (587)
T ss_dssp CCEEEEEEEEEECSSC---CSCEEEEEEEETTEEEEEEEET--T--EEEEEEEEEGGGEEEEEC-----CCCTTCEEEEE
T ss_pred CceEEEeeEEEEeccC---CCcceEEEEEECCEEEEEEecC--C--EEEeeeeechhhceeeecCCCCcccccccceeEE
Confidence 3456899998764332 1237899999999988888762 1 2224555555667777642111 11223467888
Q ss_pred EeccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 123 yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
.+... .+.++|.|.|.+|-..|+++|++|+++
T Consensus 477 ~~~~~-~~~~~L~A~S~eeK~~Wi~~I~~ai~~ 508 (587)
T 3ky9_A 477 IEDQG-AQGYELFFKTRELKKKWMEQFEMAISN 508 (587)
T ss_dssp EETTC----CEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEcCC-CceEEEEeCCHHHHHHHHHHHHHHhhh
Confidence 87643 467999999999999999999999984
No 111
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=81.48 E-value=4.6 Score=47.40 Aligned_cols=98 Identities=18% Similarity=0.335 Sum_probs=63.9
Q ss_pred ceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCC-CCccceeeeecCcceeecccceeeeCceEEEEEEEe
Q 005902 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENP-GIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYN 124 (671)
Q Consensus 46 ~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~-~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~yn 124 (671)
+.-.||+-.-.. ++.+-=++.=+|||.-.-|..||.+-.... -+.|+ .++++.|.= +.+-+ .=++|.|+|
T Consensus 540 ~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~-~~~~~~~~~ 610 (772)
T 3zvr_A 540 VIRKGWLTINNI-GIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSV------DNLKLRDVE-KGFMS-SKHIFALFN 610 (772)
T ss_dssp EEEEEEEEESSS-CCC---CCEEEEEEESSEEEEESSTTCCCEEEEEEC------TTEEEEEC---------CEEEEEEE
T ss_pred ceeeeeeeeccc-ccccCCCccceeeccccccccccchhhhcccccccc------cccccchhh-hcccc-ccccccccC
Confidence 567899987332 232223455699999999999997432220 13333 466654332 11212 237899999
Q ss_pred ccCc-----CcceeeeccCHHHHHHHHHHHHHH
Q 005902 125 RLDE-----SKKGEIACATAGEARKWMEAFDQA 152 (671)
Q Consensus 125 ~~~~-----~~~~~laa~~~eea~~W~~a~~~a 152 (671)
+... .++++|+|.|-|+...|+.+|-.|
T Consensus 611 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 643 (772)
T 3zvr_A 611 TEQRNVYKDYRQLELACETQEEVDSWKASFLRA 643 (772)
T ss_dssp TTSSCSBTTBSEEEEEESSHHHHHHHHHHHHHT
T ss_pred CccccccchhhhhhhhccccccchhhHHhhhhc
Confidence 9876 589999999999999999999665
No 112
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=81.06 E-value=7.2 Score=40.52 Aligned_cols=100 Identities=13% Similarity=0.138 Sum_probs=65.9
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCC--CCC----CCccceeeeecCcceeecccceeeeCce
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPH--ENP----GIKPIRRGVIGPTLMVEELGRRRFNHGD 116 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~--~~~----~~~pir~~~i~~~~~v~d~Gr~~~~~~~ 116 (671)
.....++|.+..+| -.+.|||+|=..+|=+-|.+.. ..| ..-=+|.-+--.++.|+|..-. ...
T Consensus 244 ~r~li~eG~l~~~g-------~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~---~~~ 313 (354)
T 1dbh_A 244 CNEFIMEGTLTRVG-------AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDT---NEY 313 (354)
T ss_dssp CCCEEEEEEEEETT-------CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCS---SSC
T ss_pred cceEEEEeeEEEEe-------cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCcc---ccc
Confidence 45667999998874 2367899998888877776521 111 1111333344456667653110 123
Q ss_pred EEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 117 VYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 117 ~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
-+.|.|+++. ...+.|-|.|.+|-..|+++|++|..
T Consensus 314 ~~~F~i~~~~--~~~~~l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 314 KHAFEIILKD--ENSVIFSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp CSEEEECCTT--SCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CccEEEecCC--CCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 4567787764 46799999999999999999999954
No 113
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=80.35 E-value=18 Score=33.59 Aligned_cols=149 Identities=8% Similarity=0.010 Sum_probs=83.0
Q ss_pred EEEEEeecCCHHHHHHHHH-ccCCcccccccCCCCceEEEEeecC-ceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCC
Q 005902 261 VKAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDG-HYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 338 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~-d~~~~~R~eWD~~~~~~eVVE~lD~-~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~d 338 (671)
+..+..|++||+++|.++. |... ..+.|-..+.+++++|- |+ .-.|.+..+.+. .+. -++.-|--..+ +
T Consensus 6 ~~~e~~i~a~a~kvw~~~~~d~~~-~~pk~~~~i~s~~i~eG-dgg~Gsir~~~~~~g-----~~~-~~~kErl~~~D-~ 76 (158)
T 2qim_A 6 FQDEYTSTIAPAKLYKALVTDADI-IIPKAVETIQSVEIVEG-NGGPGTIKKLTFIEG-----GES-KYVLHKIEAID-E 76 (158)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHH-HHHHHCTTEEEEEEEES-SSSTTCEEEEEEEET-----TEE-EEEEEEEEEEE-G
T ss_pred EEEEEEecCCHHHHHHHHhcCccc-hhhhHHhhCcEEEEEec-CCCCCeEEEEEEcCC-----Ccc-eeEEEEEEEEe-c
Confidence 3445588999999999998 8764 36788788888888876 32 223544444321 110 12222222122 3
Q ss_pred CcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHHHH
Q 005902 339 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALL 418 (671)
Q Consensus 339 GsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL 418 (671)
....+.++-++-+-.|- + + +...+-+-+.|.+. +.|.++|.+..++++-.. + .+...+.+...+.
T Consensus 77 ~~~~~~y~iieG~~~~~--~-~--~~~~~~~~v~~~~~------~gs~v~wt~~y~~~~~~~--~--~~~~~~~~~~~~~ 141 (158)
T 2qim_A 77 ANLGYNYSIVGGVGLPD--T-I--EKISFETKLVEGAN------GGSIGKVTIKIETKGDAQ--P--NEEEGKAAKARGD 141 (158)
T ss_dssp GGTEEEEEEEEESSCCC--S-E--EEEEEEEEEEECST------TCEEEEEEEEEEESTTCC--C--CHHHHHHHHHHHH
T ss_pred CCCEEEEEEEeccCCcc--c-e--EEEEEEEEEEecCC------CCEEEEEEEEEEECCCCC--C--CHHHHHHHHHHHH
Confidence 33444444444332110 1 1 23345667778543 459999999999887551 1 1111111223344
Q ss_pred HHHHHHHHHHhcCCC
Q 005902 419 SQVAGLKEYIGANPA 433 (671)
Q Consensus 419 ~~Va~LRe~~~~~~~ 433 (671)
....+|.+|+-++|.
T Consensus 142 ~~~k~ie~yll~~p~ 156 (158)
T 2qim_A 142 AFFKAIESYLSAHPD 156 (158)
T ss_dssp HHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHhCcC
Confidence 456788888888765
No 114
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=80.18 E-value=10 Score=36.53 Aligned_cols=102 Identities=10% Similarity=0.204 Sum_probs=61.1
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCC--CCCccceeeee-cCcceeecccceeeeCceEEEE
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN--PGIKPIRRGVI-GPTLMVEELGRRRFNHGDVYVM 120 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~--~~~~pir~~~i-~~~~~v~d~Gr~~~~~~~~yv~ 120 (671)
....+||=++.-..++ . ...||++|=..+|=+=+++.+.. ..... ++-+| -..+.|.+.-.. .+.+|++
T Consensus 69 R~Ll~eG~L~~k~~~~---~-~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~-~~pvi~L~~~~vre~a~d---~~~~fli 140 (185)
T 2lg1_A 69 KKLVRDGSVFLKNAAG---R-LKEVQAVLLTDILVFLQEKDQKYIFASLDQ-KSTVISLKKLIVREVAHE---EKGLFLI 140 (185)
T ss_dssp SCEEEEEEEEEECTTC---C-EEEEEEEEESSEEECCEEETTEEECCCCSS-SCSEEESSSCEEECCSSC---SSEEEEE
T ss_pred CceeeeceEEEeccCC---C-eeeEEEEeecCEEEEEEecCCEEEEEcccC-CCCeEeecceEEeccCCC---CCeEEEE
Confidence 4566999988543332 2 27899999888775544432111 00000 11222 234445544332 3456665
Q ss_pred EEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 121 ~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
+.. .....-++|-|.|++|-..||++|++|++.
T Consensus 141 ~~~--~~g~~~yel~a~s~~er~~W~~~I~~Ai~~ 173 (185)
T 2lg1_A 141 SMG--MTDPEMVEVHASSKEERNSWIQIIQDTINT 173 (185)
T ss_dssp CCS--SSCCCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred Eec--CCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 443 233567899999999999999999999984
No 115
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=78.36 E-value=2.2 Score=42.22 Aligned_cols=48 Identities=8% Similarity=0.336 Sum_probs=35.0
Q ss_pred cCCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeee
Q 005902 42 EKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVI 98 (671)
Q Consensus 42 ~~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i 98 (671)
..+.+-.+|||+. +..+-.+| ++|+|||++..+.||+.+ ..++++|.+
T Consensus 17 ~~~~~~~~g~l~~--~~~~~~~w-~~rw~vl~~~~~~~~~~~------~~~~k~G~L 64 (228)
T 3tfm_A 17 GPGSPYFHSFLYM--NGGLMNSW-KRRWCVLKDETFLWFRSK------QEALKQGWL 64 (228)
T ss_dssp ----CCEEEEEEE--CCTTTCCC-EEEEEEEETTEEEEESSC------CCSSEEEEE
T ss_pred CCCCCceEEEEee--cCcccccc-eEEEEEEeCCEEEEeccC------CCcceEEEE
Confidence 3456679999998 45666678 999999999999999943 345666655
No 116
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=77.75 E-value=8.6 Score=40.21 Aligned_cols=110 Identities=12% Similarity=0.048 Sum_probs=62.0
Q ss_pred CcceeeeEEEEEcccc--ccccceeeeeEEEeCceeeeeccCCCCCC----CCccceeeeecCcceeecccceeeeCceE
Q 005902 44 GYFEYFGWVYHMGTNS--IGHEYCHLRFLFIRGKYVEMYKRDPHENP----GIKPIRRGVIGPTLMVEELGRRRFNHGDV 117 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~--~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~----~~~pir~~~i~~~~~v~d~Gr~~~~~~~~ 117 (671)
+...++|.+....... +-..-.+.||++|=..+|=+=|.+..... ..-=.|.-+--.++.|+|.- . +.-
T Consensus 205 ~~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~----~-~~~ 279 (354)
T 2rgn_B 205 GKLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNL----Q-GDP 279 (354)
T ss_dssp CCEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGEEEEESG----G-GCT
T ss_pred ccccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeecc----C-CCC
Confidence 4556777765432111 00112378999998888877665542110 01112222233455666531 1 111
Q ss_pred EEEEEEec--cCcCcceeeeccCHHHHHHHHHHHHHHHH-HHHH
Q 005902 118 YVMRLYNR--LDESKKGEIACATAGEARKWMEAFDQAKQ-QAEV 158 (671)
Q Consensus 118 yv~~~yn~--~~~~~~~~laa~~~eea~~W~~a~~~a~~-~~~~ 158 (671)
+.|.|+.. ......+.|-|.|.+|-..|+++|.+|++ |++.
T Consensus 280 ~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~ 323 (354)
T 2rgn_B 280 CRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQRDF 323 (354)
T ss_dssp TEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34555543 23357889999999999999999999999 5444
No 117
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=77.08 E-value=13 Score=39.44 Aligned_cols=104 Identities=8% Similarity=0.100 Sum_probs=62.5
Q ss_pred cCCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCC------------CCCcc-ceeeeecCcceeeccc
Q 005902 42 EKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN------------PGIKP-IRRGVIGPTLMVEELG 108 (671)
Q Consensus 42 ~~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~------------~~~~p-ir~~~i~~~~~v~d~G 108 (671)
......++|.+.....++ -.+.||++|=..+|=+-|++.... ++... .+..+--.++.|++..
T Consensus 291 ~~r~li~eG~l~~~~~~~----~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~ 366 (418)
T 3t06_A 291 TTRKMIHEGPLTWRISKD----KTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVA 366 (418)
T ss_dssp GGSCEEEEEEEEECCBTT----BCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECS
T ss_pred ccceeEEeceEEEEeCCC----CeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceecccc
Confidence 446677999998755322 135799999888887777653210 00000 1112222344455332
Q ss_pred ceeeeCceEEEEEEEecc--CcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 005902 109 RRRFNHGDVYVMRLYNRL--DESKKGEIACATAGEARKWMEAFDQAKQQ 155 (671)
Q Consensus 109 r~~~~~~~~yv~~~yn~~--~~~~~~~laa~~~eea~~W~~a~~~a~~~ 155 (671)
-....++ |++.. ...+.++|.|.|.+|-..|+++|++|+..
T Consensus 367 ---~~~~~f~---l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~ 409 (418)
T 3t06_A 367 ---TDKRAFF---IICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 409 (418)
T ss_dssp ---SCSSEEE---EEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred ---ccCceEE---EEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 1223344 34433 22368999999999999999999999883
No 118
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=75.06 E-value=45 Score=32.11 Aligned_cols=138 Identities=14% Similarity=0.096 Sum_probs=74.0
Q ss_pred EeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCce-EEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCC---c
Q 005902 265 GVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG---T 340 (671)
Q Consensus 265 gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~t-DIvY~~~kp~~~P~~vspRDFV~LRswRr~~dG---s 340 (671)
..|++||++||++|.|... -+.|-+.+..+ +++--++.. .|-+..+... +| --++.-|--..+++. +
T Consensus 33 ~~I~Apa~~VW~~v~df~~--l~~w~P~V~s~-~~eG~~ggvGsvR~lt~~~G-~p-----~~~vkErL~~~D~~~~~~s 103 (183)
T 3rt2_A 33 KHIKAPLHLVWSIVRRFDE--PQKYKPFISRC-VVQGKKLEVGSVREVDLKSG-LP-----ATKSTEVLEILDDNEHILG 103 (183)
T ss_dssp EEESSCHHHHHHHHTCTTC--GGGTCTTEEEE-EESSSCCCTTCEEEEEECCS-ST-----TCEEEEEEEEEETTTTEEE
T ss_pred EEEeCCHHHHHHHHhCcCc--hhhcCccceEE-EeeCCCCCCCcEEEEEeCCC-Cc-----cceEEEEEEEEECCCCEEE
Confidence 3799999999999999875 57899988777 443211111 2444444421 11 123333333333333 3
Q ss_pred EEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecC-CCCCCCCCceEEEEEEeee-cCCCccccccccccchhhhHHHHH
Q 005902 341 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLN-LPMGSNGAKCLVTQMLEIH-SSGWCRWKKNSSTKFEKTTHFALL 418 (671)
Q Consensus 341 YvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~-~~~~~~~~~c~VT~I~qvD-lKGw~~w~p~~~~~~~~~~~~~mL 418 (671)
|.|..- ..| -+.| .+-+-+.|.. . +.++|.|+|....| +.|+. ..-...|-..+...=|
T Consensus 104 Y~Iieg-----~lp-~~~y------~ati~v~p~~~d----G~~gt~V~Ws~~fd~~~g~~---~e~~~~~~~~i~~~~L 164 (183)
T 3rt2_A 104 IRIVGG-----DHR-LKNY------SSTISLHSETID----GKTGTLAIESFVVDVPEGNT---KEETCFFVEALIQCNL 164 (183)
T ss_dssp EEEEEE-----SCS-CTTC------EEEEEEEEEEET----TEEEEEEEEEEEEECCTTCC---HHHHHHHHHHHHHHHH
T ss_pred EEEecC-----Ccc-eeEE------EEEEEEEEecCC----CCCCEEEEEEEEEEcCCCCC---HHHHHHHHHHHHHHHH
Confidence 444432 122 3232 3555677865 3 11279999999999 56775 2111123333333334
Q ss_pred HHHHHHHHHHhc
Q 005902 419 SQVAGLKEYIGA 430 (671)
Q Consensus 419 ~~Va~LRe~~~~ 430 (671)
..++.+-|-+..
T Consensus 165 ~~L~~~~e~~~~ 176 (183)
T 3rt2_A 165 NSLADVTERLQA 176 (183)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 455555555443
No 119
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=75.05 E-value=5.1 Score=41.54 Aligned_cols=97 Identities=15% Similarity=0.255 Sum_probs=59.2
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCC-------CCCccceeeeecCcceeecccce--eee-
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN-------PGIKPIRRGVIGPTLMVEELGRR--RFN- 113 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~-------~~~~pir~~~i~~~~~v~d~Gr~--~~~- 113 (671)
....++|.+.. . + | +.||++|=..+|=+=|.+.... -...|+.. +.|++.--. ...
T Consensus 230 r~li~~G~l~~--~-~-~----~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~------l~v~~~~d~~~~~~~ 295 (346)
T 2z0q_A 230 RVLCCHGELKN--N-R-G----VKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKD------LTLEDLQDGEVRLGG 295 (346)
T ss_dssp CCEEEEEEEEE--T-T-S----CEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGG------CEEEECCTTTSCCCS
T ss_pred eEEEEeceeEE--C-C-C----cEEEEEECCCcEEEEEEeccCCceeeeeecCCcchhh------ceeeecCCCccccCc
Confidence 34568898764 1 1 3 6889999888887766543211 01233333 344432100 000
Q ss_pred ---------CceEEEEEEEecc-CcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 114 ---------HGDVYVMRLYNRL-DESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 114 ---------~~~~yv~~~yn~~-~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
...-+.|.|+++. .....++|.|.|.+|-..|+++|++|++
T Consensus 296 s~~g~~~~~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~aie 346 (346)
T 2z0q_A 296 SLRGAFSNNERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKE 346 (346)
T ss_dssp CC--CCSHHHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cccccccCCcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhhC
Confidence 0123567776543 2357889999999999999999999974
No 120
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=73.91 E-value=41 Score=29.65 Aligned_cols=101 Identities=15% Similarity=0.156 Sum_probs=53.1
Q ss_pred cceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeCceEEEEEEEe
Q 005902 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYN 124 (671)
Q Consensus 45 ~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~~~~yv~~~yn 124 (671)
-..+||=+..+-++ .....+++||+|=.-.|=|=++++... +..=....+--.++.|+|..= ++.+-..|.|-.
T Consensus 7 ~lv~eG~l~el~~~--~~k~~~~v~~FLfND~Ll~a~~~~~~~-~~~~~~~~~~L~~~~v~d~~d---~~~~~n~f~i~~ 80 (113)
T 1zc3_B 7 YLVYNGDLVEYEAD--HMAQLQRVHGFLMNDCLLVATWLPQRR-GMYRYNALYPLDRLAVVNVKD---NPPMKDMFKLLM 80 (113)
T ss_dssp CEEEEEEEEEEETT--TCCEEEEEEEEEESSEEEEEEEECCTT-SCEEEEEEEETTTCEEEEECC---BTTBSSEEEEEE
T ss_pred EEEEeCcEEEEccc--cCCCCccEEEEecCCEEEEEEEeccCc-ccEEEEEEEEcccCEEEECCC---CcccceEEEEEe
Confidence 34578877765432 234456776665555554444444321 110001111222344544211 122333344432
Q ss_pred ccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 125 RLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 125 ~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
. .+...+.|.+++|-..|+.+|++|++
T Consensus 81 ~---~~s~~~~aes~~eK~~Wl~~~~~a~~ 107 (113)
T 1zc3_B 81 F---PESRIFQAENAKIKREWLEVLEETKR 107 (113)
T ss_dssp T---TEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred C---CceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 2 23468889999999999999999987
No 121
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=72.48 E-value=72 Score=30.82 Aligned_cols=142 Identities=12% Similarity=0.062 Sum_probs=74.6
Q ss_pred EeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEE-cCCCcEEE
Q 005902 265 GVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFR-GQDGTYTI 343 (671)
Q Consensus 265 gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr-~~dGsYvI 343 (671)
..|++|+++++.++.|... -..|-+.+..+++++-=++--.|-+..+... .| +-.++..-. .++..+.+
T Consensus 41 ~~I~Apa~~vW~lv~df~~--~~~w~p~I~s~e~~eGdg~vGsVR~~t~~~G-~p-------~~~vkErL~~iD~~~~~~ 110 (190)
T 3kl1_A 41 QRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISG-LP-------ASTSTERLEFVDDDHRVL 110 (190)
T ss_dssp EEESSCHHHHHHHHHCTTC--GGGTCSSEEEEEEEESSSSTTCEEEEEECSS-SS-------CEEEEEEEEEEETTTTEE
T ss_pred EEecCCHHHHHHHHhCCCC--hhHcccccCEEEEEcCCCCCCeEEEEEecCC-Cc-------cceEEEEEEEEeccCCEE
Confidence 3689999999999999875 6679888888888754332234555555432 11 222222211 12222222
Q ss_pred EEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeee-cCCCccccccccccchhhhHHHHHHHHH
Q 005902 344 LQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH-SSGWCRWKKNSSTKFEKTTHFALLSQVA 422 (671)
Q Consensus 344 a~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvD-lKGw~~w~p~~~~~~~~~~~~~mL~~Va 422 (671)
.++=++- .. |...| ++. ..+.|..+.+ .+.++|.|+|....| +.|+. -.-...+-.. ...+-++
T Consensus 111 sY~iieG-~~-~~~~Y-~s~-----~~v~~~~~~~-~~~~gt~V~Ws~~f~~p~g~~---~e~~~~~~~~---~~~~gL~ 175 (190)
T 3kl1_A 111 SFRVVGG-EH-RLKNY-KSV-----TSVNEFLNQD-SGKVYTVVLESYTVDIPEGNT---EEDTKMFVDT---VVKLNLQ 175 (190)
T ss_dssp EEEEEEE-SS-SCCSC-EEE-----EEEEEEEC-C-CCCEEEEEEEEEEEECCTTCC---HHHHHHHHHH---HHHHHHH
T ss_pred EEEEEec-CC-ccccE-EEE-----EEEEeccccc-CCCCcEEEEEEEEEEcCCCCC---HHHHHHHHHH---HHHHHHH
Confidence 2222221 12 22232 333 3344542100 124689999999999 88887 2111122222 2244556
Q ss_pred HHHHHHhcC
Q 005902 423 GLKEYIGAN 431 (671)
Q Consensus 423 ~LRe~~~~~ 431 (671)
+|+..++..
T Consensus 176 ~L~~~~e~~ 184 (190)
T 3kl1_A 176 KLGVAATSA 184 (190)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHhcc
Confidence 666665543
No 122
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=71.09 E-value=0.84 Score=49.81 Aligned_cols=100 Identities=10% Similarity=0.072 Sum_probs=0.0
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCC--CC-----------CCccc-eeeeecCcceeecccc
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHE--NP-----------GIKPI-RRGVIGPTLMVEELGR 109 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~--~~-----------~~~pi-r~~~i~~~~~v~d~Gr 109 (671)
....++|.++..++ .+.|||+|=..+|=+-|..... .+ ....+ |..+--.++.|++.--
T Consensus 251 r~li~eG~l~~~~~-------~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d 323 (510)
T 3jzy_A 251 RKLLHSGKLYKTKS-------NKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTD 323 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeEEeceEEEcCC-------CcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccCC
Confidence 34558888876532 2589999988888777744322 00 01222 3333344555554300
Q ss_pred eeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 005902 110 RRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (671)
Q Consensus 110 ~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~~~ 156 (671)
.+..-+.|.|+.+. +.++|.|.|.+|...|+++|++|++++
T Consensus 324 ---~~~~~~~F~i~~~~---~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 324 ---PSSDEPVFHISHID---RVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp -----------------------------------------------
T ss_pred ---CCccccceeeeccc---eeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 01234578888753 479999999999999999999999843
No 123
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=69.92 E-value=15 Score=44.36 Aligned_cols=100 Identities=14% Similarity=0.200 Sum_probs=66.6
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCC--CC----CccceeeeecCcceeecccceeeeCce
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN--PG----IKPIRRGVIGPTLMVEELGRRRFNHGD 116 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~--~~----~~pir~~~i~~~~~v~d~Gr~~~~~~~ 116 (671)
+....++|.+..+++. +.||++|=..+|=+=|++.... ++ ..-+|.-+--.++.|+|.--. ...
T Consensus 441 ~r~Li~eG~l~~~~~k-------~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~---~~~ 510 (1049)
T 3ksy_A 441 CNEFIMEGTLTRVGAK-------HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDT---NEY 510 (1049)
T ss_dssp CSCCCCEEEEEETTCS-------SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCS---SSC
T ss_pred cceEEEeceEEEEccC-------ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCC---ccc
Confidence 3556699999887632 7899999999887877653210 00 122333333444555543111 123
Q ss_pred EEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 117 VYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 117 ~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
-+.|.|.++.. ..+.|.|.|.+|-.+|+++|+.+.+
T Consensus 511 ~~~F~I~~~~~--~~~~L~A~S~eeK~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 511 KHAFEIILKDE--NSVIFSAKSAEEKNNWMAALISLQY 546 (1049)
T ss_dssp CSEEEECCTTS--CCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cceEEEEcCCC--CEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 46788877653 6899999999999999999998866
No 124
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=67.09 E-value=50 Score=30.39 Aligned_cols=148 Identities=9% Similarity=-0.010 Sum_probs=81.1
Q ss_pred EEEEeecCCHHHHHHHHH-ccCCcccccccCCCCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCCc
Q 005902 262 KAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGT 340 (671)
Q Consensus 262 Ka~gvVdaspe~Vfe~L~-d~~~~~R~eWD~~~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~dGs 340 (671)
..+..|++||+++|.++. |... ..+.|-+.+.+++++|-=.+.-.|.+..+.+. .+. -++.-|--..+ +..
T Consensus 6 ~~e~~i~a~a~kvw~~~~~d~~~-~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~~G-----~~~-~~~kErl~~~D-~~~ 77 (155)
T 1icx_A 6 ENEQSSTVAPAKLYKALTKDSDE-IVPKVIEPIQSVEIVEGNGGPGTIKKIIAIHD-----GHT-SFVLHKLDAID-EAN 77 (155)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHH-HHHHHSTTEEEEEEEESSSSTTCEEEEEEESS-----SSE-EEEEEEEEEEE-GGG
T ss_pred EEEEEecCCHHHHHHHHhcCcch-hcchhhhhccEEEEEecCCCCCeEEEEEEecC-----Ccc-eeEEEEEEEEe-ccC
Confidence 345578999999999998 8764 36788788888888876222223555444421 111 12222222222 333
Q ss_pred EEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHHHHHH
Q 005902 341 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQ 420 (671)
Q Consensus 341 YvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~~ 420 (671)
..+.++-++-+-.| . + + +...+-+-+.|.+. +.|.++|.+..+++|-. --+.-+ +..... +...
T Consensus 78 ~~~~y~iieGd~~~-~-~-~--~~~~~~~~v~~~~~------~gs~v~w~~~y~~~~~~-~~~~~~-~~~~~~---~~~~ 141 (155)
T 1icx_A 78 LTYNYSIIGGEGLD-E-S-L--EKISYESKILPGPD------GGSIGKINVKFHTKGDV-LSETVR-DQAKFK---GLGL 141 (155)
T ss_dssp TEEEEEEEEETTSC-T-T-E--EEEEEEEEEEECGG------GCEEEEEEEEEEESSSS-CCHHHH-TTHHHH---HHHH
T ss_pred CEEEEEEEecCCCc-c-c-e--EEEEEEEEEEecCC------CCEEEEEEEEEEECCCC-CCHHHH-HHHHHH---HHHH
Confidence 44444444433222 1 1 1 23345667778543 35999999999988654 101000 111222 3345
Q ss_pred HHHHHHHHhcCCC
Q 005902 421 VAGLKEYIGANPA 433 (671)
Q Consensus 421 Va~LRe~~~~~~~ 433 (671)
..+|.+|+-++|.
T Consensus 142 ~k~ie~yll~~p~ 154 (155)
T 1icx_A 142 FKAIEGYVLAHPD 154 (155)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCC
Confidence 5778888877753
No 125
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=64.40 E-value=56 Score=32.21 Aligned_cols=139 Identities=12% Similarity=0.063 Sum_probs=70.5
Q ss_pred EeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCce-EEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCCcEEE
Q 005902 265 GVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTI 343 (671)
Q Consensus 265 gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~t-DIvY~~~kp~~~P~~vspRDFV~LRswRr~~dGsYvI 343 (671)
..|++||++|+.+|.|... -+.|-+.+..+++++--++.. .|-+..+... .| -..+.-|--..++.. ..+
T Consensus 60 ~~I~ApadkVW~lv~Df~~--l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~~G-~p-----~~~vkErL~~lDde~-~~~ 130 (208)
T 3jrs_A 60 QRIHAPPETVWSVVRRFDR--PQIYKHFIKSCNVSEDFEMRVGCTRDVNVISG-LP-----ANTSRERLDLLDDDR-RVT 130 (208)
T ss_dssp EEESSCHHHHHHHHTCTTC--GGGTCTTEEEEECCTTCCCSTTCEEEEEECTT-SS-----CCEEEEEEEEEETTT-TEE
T ss_pred EEEeCCHHHHHHHHhCcCC--hhHccccceEEEEecCCCCCCCeEEEEEecCC-Cc-----cceEEEEEEEEeccC-CEE
Confidence 3689999999999999886 578988777776653211111 2434443321 11 123333322233332 222
Q ss_pred EEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeee------cCCCccccccccccchhhhHHHH
Q 005902 344 LQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH------SSGWCRWKKNSSTKFEKTTHFAL 417 (671)
Q Consensus 344 a~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvD------lKGw~~w~p~~~~~~~~~~~~~m 417 (671)
.++=++- .. |-+.|. +-.-+.|... .++|.|+|..... +.|+. -.-...+... ..
T Consensus 131 sYsIieG-~l-pv~~Y~------sti~V~p~~~-----g~~t~V~Wt~~fes~~~D~p~g~~---~e~a~~~~~~---vy 191 (208)
T 3jrs_A 131 GFSITGG-EH-RLRNYK------SVTTVHRFEK-----EEEEERIWTVVLESYVVDVPEGNS---EEDTRLFADT---VI 191 (208)
T ss_dssp EEEEEES-SS-SCTTCE------EEEEEEEEEC----------CEEEEEEEEEEEECCTTSC---HHHHHHHHHH---HH
T ss_pred EEEEeeC-Cc-ceeeEE------EEEEEEEccC-----CCccEEEEEEEEEEccCCCCCCCC---HHHHHHHHHH---HH
Confidence 2222222 22 344653 4555677643 2578999998887 66776 1110111111 22
Q ss_pred HHHHHHHHHHHhcC
Q 005902 418 LSQVAGLKEYIGAN 431 (671)
Q Consensus 418 L~~Va~LRe~~~~~ 431 (671)
.+-+++|+..++..
T Consensus 192 ~~gL~~L~~~~e~~ 205 (208)
T 3jrs_A 192 RLNLQKLASITEAM 205 (208)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 45667777766653
No 126
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=59.07 E-value=1.1e+02 Score=28.13 Aligned_cols=144 Identities=11% Similarity=0.074 Sum_probs=76.1
Q ss_pred EEEEEeecCCHHHHHHH-HHccCCcccccccCCC-CceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCC
Q 005902 261 VKAVGVIDASADTVFEV-VLNLERHQRYEWDMLT-GDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 338 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~-L~d~~~~~R~eWD~~~-~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~d 338 (671)
+..+..|++||++||.+ +.|... .++.|-+.+ .+++++|-=++.=.|.+..+.+ ...+ -++.-|--..+++
T Consensus 5 ~~~e~~i~a~a~kvw~~~v~d~~~-l~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~~-----g~~~-~~~kErl~~iD~~ 77 (155)
T 2flh_A 5 FNTQTELSVRLEALWAVLSKDFIT-VVPKVLPHIVKDVQLIEGDGGVGTILIFNFLP-----EVSP-SYQREEITEFDES 77 (155)
T ss_dssp EEEEEEESSCHHHHHHHHHTSCTT-HHHHHCTTTEEEEEEEECSSSTTCEEEEEECT-----TSSS-CEEEEEEEEEETT
T ss_pred EEEEEEecCCHHHHHHHHhccccc-ccchhccccceEEEEEcCCCCCCeEEEEEeeC-----CCCC-cEEEEEEEEEeCC
Confidence 34455889999999999 788876 458999855 6667776532222355555443 1233 4555444444444
Q ss_pred C---cEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHH
Q 005902 339 G---TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHF 415 (671)
Q Consensus 339 G---sYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~ 415 (671)
. +|.|....+- ..+-+. ..+-+-+.|.++ +.|.++|.+..+.+|-.. +. .....+ .-
T Consensus 78 ~~~~~y~iieg~~l---~~~~~~------~~~~i~v~p~~~------ggs~v~wt~~y~~~~~~~--~~--~~~~~~-~~ 137 (155)
T 2flh_A 78 SHEIGLQVIEGGYL---SQGLSY------YKTTFKLSEIEE------DKTLVNVKISYDHDSDIE--EK--VTPTKT-SQ 137 (155)
T ss_dssp TTEEEEEEEEEGGG---GTTCSE------EEEEEEEEEEET------TEEEEEEEEEEEC-----------CCHHHH-HH
T ss_pred CCEEEEEEEecccc---ccCceE------EEEEEEEEECCC------CCEEEEEEEEEEECCCCc--cC--hhHhhh-HH
Confidence 3 3445444321 012222 234555677553 579999999999887551 21 111110 01
Q ss_pred HHHHHHHHHHHHHhcC
Q 005902 416 ALLSQVAGLKEYIGAN 431 (671)
Q Consensus 416 ~mL~~Va~LRe~~~~~ 431 (671)
........|.+|+-++
T Consensus 138 ~~~~~~k~ie~yll~~ 153 (155)
T 2flh_A 138 STLMYLRRLERYLSNG 153 (155)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhhC
Confidence 2234456777777554
No 127
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=54.27 E-value=13 Score=37.08 Aligned_cols=111 Identities=13% Similarity=0.060 Sum_probs=54.9
Q ss_pred eecCCHHHHHHHHHccCCcccccccCCCCceEEEEeec-CceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCCcEEEE
Q 005902 266 VIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYD-GHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTIL 344 (671)
Q Consensus 266 vVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD-~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~dGsYvIa 344 (671)
.|++||++||.+|.|... -..|-+.+..+++++-=. +--.|-+..+.+. .| ...-++ |--. .++..+.+.
T Consensus 85 ~I~ApadkVW~lv~Df~~--pk~w~p~I~s~el~eGdg~gvGSVR~lt~~~G-~p-~~~vkE----rLe~-iDde~~~~s 155 (223)
T 3qrz_A 85 MIHAPPESVWALVRRFDN--PKVYKNFIRQCRIVQGDGLHVGDLREVMVVSG-LP-AVSSTE----RLEI-LDEERHVIS 155 (223)
T ss_dssp CCSSCHHHHHHHHHCCSS--GGGTCSSCCCCCCCC---CCSSCCCCCCC----CC-CCCCCC----CCSE-EETTTTEEE
T ss_pred EEcCCHHHHHHHHhCCCC--hhHcchhcCEEEEEcCCCCCCCeEEEEEecCC-Cc-cceEEE----EEEE-EeccCCEEE
Confidence 689999999999999875 678999999988875321 1111222222211 01 001111 1001 123334444
Q ss_pred EeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeee-cCCCc
Q 005902 345 QFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH-SSGWC 399 (671)
Q Consensus 345 ~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvD-lKGw~ 399 (671)
++=++- .. |...| -+-+-+.|.+. +.|.|+|....| +.|+.
T Consensus 156 YsIieG-~~-p~~~Y------~stikV~p~~d------GGT~V~Ws~~f~pp~g~~ 197 (223)
T 3qrz_A 156 FSVVGG-DH-RLKNY------RSVTTLHASDD------EGTVVVESYIVDVPPGNT 197 (223)
T ss_dssp CCCTTC-SS-SCCCC------CCEEEC--------------CCEEEEEECSCSSSC
T ss_pred EEEEeC-CC-ccccE------EEEEEEEEcCC------CCEEEEEEEEEEcCCCCC
Confidence 433332 22 22232 23356677543 479999999999 68886
No 128
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=53.15 E-value=1.7e+02 Score=28.60 Aligned_cols=137 Identities=13% Similarity=0.135 Sum_probs=75.0
Q ss_pred eecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCce-EEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCC---cE
Q 005902 266 VIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG---TY 341 (671)
Q Consensus 266 vVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~t-DIvY~~~kp~~~P~~vspRDFV~LRswRr~~dG---sY 341 (671)
.|++||++|+.+|.|... -..|-+.+..+++ +- ++.. .|-+..+... +| --++.-|--..++.. +|
T Consensus 59 ~I~ApadkVW~lV~Df~~--l~kW~P~V~s~ev-eG-dg~vGsVR~vt~~~G-~p-----~~~vkErL~~lDde~~~~sY 128 (205)
T 3oqu_A 59 HIKAPLHLVWSLVRRFDQ--PQKYKPFVSRCTV-IG-DPEIGSLREVNVKSG-LP-----ATTSTERLELLDDEEHILGI 128 (205)
T ss_dssp EESSCHHHHHHHHTCTTC--GGGTCTTEEEEEC-CS-SCCTTCEEEEEECTT-SS-----CSEEEEEEEEEETTTTEEEE
T ss_pred EEcCCHHHHHHHHhCcCC--hhHcCccceEEEe-eC-CCCCCcEEEEEEcCC-Cc-----cceEEEEEEEEECCCCEEEE
Confidence 689999999999999886 6789998887753 31 1111 2444444321 11 123333322233332 34
Q ss_pred EEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeee-cCCCccccccccccchhhhHHHHHHH
Q 005902 342 TILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH-SSGWCRWKKNSSTKFEKTTHFALLSQ 420 (671)
Q Consensus 342 vIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvD-lKGw~~w~p~~~~~~~~~~~~~mL~~ 420 (671)
.|..- ..| -+.| .+-.-+.|.+.. +...|.+.|=...| +.|+. -.-...+-..+...=|..
T Consensus 129 sIieG-----~lp-v~~Y------~ati~V~p~~~d---G~~~T~v~ws~~~D~p~g~t---~e~~~~~v~~v~~~gL~~ 190 (205)
T 3oqu_A 129 KIIGG-----DHR-LKNY------SSILTVHPEIIE---GRAGTMVIESFVVDVPQGNT---KDETCYFVEALIRCNLKS 190 (205)
T ss_dssp EEEEE-----SSS-CTTC------EEEEEEEEECCC---C-CEEEEEEEEEEECCTTCC---HHHHHHHHHHHHHHHHHH
T ss_pred EEEec-----Ccc-eeEE------EEEEEEEEccCC---CCceEEEEEEEeccCCCCCC---HHHHHHHHHHHHHHHHHH
Confidence 44442 223 3343 455567887631 22478999989999 78887 221122333333333555
Q ss_pred HHHHHHHHhc
Q 005902 421 VAGLKEYIGA 430 (671)
Q Consensus 421 Va~LRe~~~~ 430 (671)
++...|-+..
T Consensus 191 L~~~~e~~~~ 200 (205)
T 3oqu_A 191 LADVSERLAS 200 (205)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 5555555544
No 129
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=48.97 E-value=3.6 Score=43.75 Aligned_cols=8 Identities=38% Similarity=0.787 Sum_probs=0.0
Q ss_pred cccccccc
Q 005902 57 TNSIGHEY 64 (671)
Q Consensus 57 ~~~~g~~~ 64 (671)
.+|||.+|
T Consensus 325 ~~~~~~~~ 332 (358)
T 2pk2_A 325 LRSLGIDY 332 (358)
T ss_dssp --------
T ss_pred ccccceee
Confidence 35699988
No 130
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=47.85 E-value=1.2e+02 Score=28.22 Aligned_cols=143 Identities=14% Similarity=-0.000 Sum_probs=76.8
Q ss_pred EEEEEeecCCHHHHHHHHH-ccCCcccccccC-CCCceEEEEee-cCceEEEEEEecCCcCCCCCCCCeEEEEEEEEE-c
Q 005902 261 VKAVGVIDASADTVFEVVL-NLERHQRYEWDM-LTGDLELVDSY-DGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFR-G 336 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~-d~~~~~R~eWD~-~~~~~eVVE~l-D~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr-~ 336 (671)
+.....|++||++||+++. +.. ..+.|-+ .+.+++++|-= ++.-.|.+..+.+.. .+-.++..-. .
T Consensus 19 ~~~ev~i~apa~kvw~~~~~d~~--~lpk~~P~~i~s~~~~eGd~gg~Gsir~~~~~~gg--------~~~~~kErl~~i 88 (166)
T 2i9y_A 19 LETDVEIKASADKFHHMFAGKPH--HVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDG--------EAKVAKERIEAV 88 (166)
T ss_dssp EEEEEEESSCHHHHHGGGSSCSS--CCCCSCSSCCSSCCCCSCCSCSTTCCCEEEEEETT--------EEEEEEEEEEEE
T ss_pred EEEEEEecCCHHHHHHHHhcccc--cccccccccceEEEEEcCCCCCCCeEEEEEEecCC--------CceEEEEEEEEE
Confidence 4556688999999999965 544 4889998 88899988752 222224443333210 1212222111 2
Q ss_pred CCCcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHH
Q 005902 337 QDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFA 416 (671)
Q Consensus 337 ~dGsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~ 416 (671)
++....+.++-++-+- ..+| +...+-+-+.|.++ ++.|.|+|.+..+.++-.. +. + . .+.-.
T Consensus 89 D~~~~~~~y~iieGd~---~~~~---~~~~~ti~v~p~~~-----g~gs~v~wt~~ye~~~~~~--~~--p--~-~~~~~ 150 (166)
T 2i9y_A 89 EPDKNLITFRVIEGDL---MKEY---KSFLLTIQVTPKPG-----GPGSIVHWHLEYEKISEEV--AH--P--E-TLLQF 150 (166)
T ss_dssp ETTTTEEEEEECCTTG---GGTE---EEEEEEEEEEEEEE-----TTEEEEEEEEEEEESSTTT--CC--T--H-HHHHH
T ss_pred eccCcEEEEEEEeCCC---CCCe---eEEEEEEEEEECCC-----CCCcEEEEEEEEEECCCCC--CC--H--H-HHHHH
Confidence 3333444444444322 1111 23345666777642 2469999999998764330 11 1 1 12223
Q ss_pred HHHHHHHHHHHHhcC
Q 005902 417 LLSQVAGLKEYIGAN 431 (671)
Q Consensus 417 mL~~Va~LRe~~~~~ 431 (671)
+......|.+|+.++
T Consensus 151 ~~~~~k~ie~~l~~~ 165 (166)
T 2i9y_A 151 CVEVSKEIDEHLLAE 165 (166)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhhC
Confidence 334456677776554
No 131
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=44.61 E-value=1.6e+02 Score=29.53 Aligned_cols=97 Identities=12% Similarity=0.053 Sum_probs=68.3
Q ss_pred CcceeeeEEEEEccccccccceeeeeEEEeC-------ceeeeeccCCCCCCCCccce-eeeecCcceeecccceeeeCc
Q 005902 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRG-------KYVEMYKRDPHENPGIKPIR-RGVIGPTLMVEELGRRRFNHG 115 (671)
Q Consensus 44 ~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~-------~~l~~yK~~p~~~~~~~pir-~~~i~~~~~v~d~Gr~~~~~~ 115 (671)
..+..||.+ +++.+| .| +.||.||+- -.|..||.+.+-. +..+-| ++.+.+.|-+|- .....+
T Consensus 7 ~~~v~eg~v-k~r~~K---kW-k~rw~vlrk~s~~adcl~L~vYkd~~dr~-k~~~~KaslsL~~~~GlE~---g~~ldk 77 (224)
T 3ml4_A 7 EAALVEGQV-KLRDGK---KW-KSRWLVLRKPSPVADCLLMLVYKDKCERS-KGLRERSSLTLEDICGLEP---ALPYEG 77 (224)
T ss_dssp CCCSEEEEE-EEC------CC-EEEEEEEECSSTTSSCEEEEEESSSHHHH-SCCCCSEEEEECCEEEEEE---EEEETT
T ss_pred cceeEEEee-eeecCC---ce-eeEEEEEEcCCCchheEEEEEEcChhhhh-cCCcccceeehHHhcCccc---cccccC
Confidence 456688875 455555 78 999999974 1678898777543 123333 588899998882 235566
Q ss_pred eEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHH
Q 005902 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQA 152 (671)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a 152 (671)
.-+++.|.... ....||+.+.|++..|--.|...
T Consensus 78 ~s~TlAIIc~d---~~~vLAFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 78 LAHTLAIICLS---QAVMLGFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp EEEEEEEEESS---CEEEEECSSHHHHHHHHHHHHHH
T ss_pred cccEEEEEecC---cEEEEEeCCHHHHHHHHHHHhhc
Confidence 77888888654 46699999999999998888664
No 132
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=43.12 E-value=1.9e+02 Score=26.85 Aligned_cols=100 Identities=12% Similarity=0.194 Sum_probs=62.1
Q ss_pred CcCCcceeeeEE-EEEcccc-----ccccceeeeeEEEeC------ceeeeeccCCCCCCCCccceeee------ecCcc
Q 005902 41 KEKGYFEYFGWV-YHMGTNS-----IGHEYCHLRFLFIRG------KYVEMYKRDPHENPGIKPIRRGV------IGPTL 102 (671)
Q Consensus 41 ~~~~~~~~~Gw~-y~~g~~~-----~g~~~~~~Ryfvl~~------~~l~~yK~~p~~~~~~~pir~~~------i~~~~ 102 (671)
+.......||=| |-.+-+- =+-+| +++-|||.- -.|.+| ..|++. .|--++- |-.++
T Consensus 13 ~~~~e~~kEG~l~~~~~~~~~~~~~~~~~W-~k~RLvL~k~g~G~~y~LEfy-~PPkss---KpK~~i~cs~I~EVR~tt 87 (136)
T 1v5m_A 13 VELVDIQREGALRFMVADDAASGPGGTAQW-QKCRLLLRRAVAGERFRLEFF-VPPKAS---RPKVSIPLSAIIEVRTTM 87 (136)
T ss_dssp CCSCSCCEEEEEEEEECSCCCSSSCCSCCC-EEEEEEEEECSSSCCEEEEEE-SSTTSS---SCSSCEETTTCCBCCCCC
T ss_pred cccceeeeeeeeeeecccccccccCcccch-hheeeEEEEccCCCceEEEEe-cCCccc---CCccccchhhhhhhhhcc
Confidence 344455577776 6655444 23456 555556532 578899 455442 2222221 23444
Q ss_pred eeecccceeeeCceEEEEEEEeccCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 103 MVEELGRRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 103 ~v~d~Gr~~~~~~~~yv~~~yn~~~~~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
+.| ..-.--.||+++.|.. .+-|.|.+.++...|+..|+.++.
T Consensus 88 ~LE-----mPD~~nTFVlK~~n~~----eyi~ea~d~~q~~sWla~Ir~C~~ 130 (136)
T 1v5m_A 88 PLE-----MPEKDNTFVLKVENGA----EYILETIDSLQKHSWVADIQGCVD 130 (136)
T ss_dssp CSS-----SCCCTTEECCBCTTSC----BEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccc-----cCCccceEEEEecCCc----EEEEEcCCHHHHHHHHHHHHhhcC
Confidence 443 4444557888877744 588899999999999999999976
No 133
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=41.62 E-value=2.2e+02 Score=29.38 Aligned_cols=26 Identities=4% Similarity=0.310 Sum_probs=24.2
Q ss_pred CcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 129 SKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 129 ~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
...+.|.|.|.+|-..|+++|++|+.
T Consensus 341 ~~~~~l~A~s~~eK~~W~~~i~~~i~ 366 (377)
T 1foe_A 341 ERVFHLCCSSPESRKDFLKSVHSILR 366 (377)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred cceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 46789999999999999999999998
No 134
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=41.26 E-value=2e+02 Score=28.27 Aligned_cols=107 Identities=9% Similarity=0.084 Sum_probs=60.0
Q ss_pred EeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCc-eEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCC---c
Q 005902 265 GVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGH-YDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG---T 340 (671)
Q Consensus 265 gvVdaspe~Vfe~L~d~~~~~R~eWD~~~~~~eVVE~lD~~-tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~dG---s 340 (671)
..|++||++|+.+|.|... -..|=+.+..|++++--++. -.|-+..+... +| --.+.-|--..++.. +
T Consensus 56 ~~I~ApadkVW~lv~dF~~--l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~~G-~p-----~~~vkErL~~lDd~~~~~s 127 (211)
T 3k3k_A 56 QRIHAPPELVWSIVRRFDK--PQTYKHFIKSCSVEQNFEMRVGCTRDVIVISG-LP-----ANTSTERLDILDDERRVTG 127 (211)
T ss_dssp EEESSCHHHHHHHHTCTTC--GGGTCSSEEEEECCTTCCCCTTCEEEEEESSS-SS-----CEEEEEEEEEEETTTTEEE
T ss_pred EEEcCCHHHHHHHHhCcCC--hhHcCccceEEEEecCCCCCCCcEEEEEecCC-Cc-----cceEEEEEEEEeccCCEEE
Confidence 3689999999999999875 67898877777766532111 23545444432 11 113322222223332 3
Q ss_pred EEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeee------cCCCc
Q 005902 341 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH------SSGWC 399 (671)
Q Consensus 341 YvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvD------lKGw~ 399 (671)
|.|..- .. |-+.| .+-+-+.|.+. + + |+|....+ +.|+.
T Consensus 128 YsIieg-----~l-pv~~Y------~sti~V~p~~~------g-g-V~Wt~~fes~~~D~P~g~~ 172 (211)
T 3k3k_A 128 FSIIGG-----EH-RLTNY------KSVTTVHRFEK------E-N-RIWTVVLESYVVDMPEGNS 172 (211)
T ss_dssp EEEEEE-----TT-GGGTC------EEEEEEEEEEE------T-T-EEEEEEEEEEEEECCSSSS
T ss_pred EEEeec-----Cc-ceeEE------EEEEEEEECCC------C-C-EEEEEEEEEecCCCCCCCC
Confidence 444432 12 23344 35566778764 1 2 88877776 66776
No 135
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=30.24 E-value=44 Score=29.20 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=24.1
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccC
Q 005902 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDM 291 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~ 291 (671)
+.....|++||++||+.|.|... -.+|..
T Consensus 3 i~~~~~i~ap~e~Vw~altd~~~--~~~W~~ 31 (135)
T 3q6a_A 3 IITKMQVDVPRETVFEAFVDPEK--IGGFWF 31 (135)
T ss_dssp EEEEEEESSCHHHHHHHHHCTTT--GGGTSS
T ss_pred EEEEEEeCCCHHHHHHHHcCHHH--hcccCC
Confidence 34566899999999999999885 788865
No 136
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=28.17 E-value=3.7e+02 Score=25.09 Aligned_cols=149 Identities=8% Similarity=-0.055 Sum_probs=78.6
Q ss_pred EEEEEeecCCHHHHHHHH-HccCCcccccccCC-CCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCC
Q 005902 261 VKAVGVIDASADTVFEVV-LNLERHQRYEWDML-TGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 338 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L-~d~~~~~R~eWD~~-~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~d 338 (671)
+-.+..+.+||+++|.++ .|... ..+.|-+. +.+++++|-=++-=.|.+..+. . + --++.-|--..++.
T Consensus 11 ~~~ei~i~apa~kvw~~~v~d~~~-l~pk~~P~~v~s~e~~eGdgg~Gsir~~t~~-g--~-----~~~~kErl~~iD~~ 81 (168)
T 3rws_A 11 SESEYVSSLSAEKLYRGIVEDGNI-IYPKALPRFIEKAETLEGDGGPGTIKKLTFV-G--D-----FGSTKQHIDMVDRE 81 (168)
T ss_dssp EEEEEEESSCHHHHHHHHHTSHHH-HHHHHSTTTEEEEEEEESSSSTTCEEEEEES-S--S-----SCEEEEEEEEEETT
T ss_pred EEEEEEecCCHHHHHHHHhcCccc-cchhhCccccceEEEeeCCCCCCeEEEEEEc-C--C-----CeEEEEEEEEEccc
Confidence 344557899999999997 77764 46789985 7777777653222235444433 1 1 01333222222333
Q ss_pred CcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCC-ccccccccccchhhhHHHH
Q 005902 339 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGW-CRWKKNSSTKFEKTTHFAL 417 (671)
Q Consensus 339 GsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw-~~w~p~~~~~~~~~~~~~m 417 (671)
...+.++=++-+-.. .. +-+...+-+-+.|.++ ++|.|+|.+..+.+|- .. +.- ..+ +...-.+
T Consensus 82 -~~~~sY~iiegd~l~---~~-p~~~y~~ti~v~p~~~------ggs~v~wt~~y~~~~~d~~--~~~-e~~-k~~~~~~ 146 (168)
T 3rws_A 82 -NCAYTYSVYEGIALS---DQ-PLEKIVFEFKLVPTPE------EGCIVKSTTKYYTKGDDIE--LSK-DYL-EAGIERF 146 (168)
T ss_dssp -TTEEEEEECSSCCBT---TB-CEEEEEEEEEEEECTT------SCEEEEEEEEEEECSSSCC--CCH-HHH-HHHHHHH
T ss_pred -CCEEEEEEEccCccc---Cc-CceEEEEEEEEEECCC------CceEEEEEEEEEECCCccC--CCH-HHH-HHHHHHH
Confidence 233333333322111 00 1223445666777553 5799999999999886 41 100 011 1112222
Q ss_pred HHHHHHHHHHHhcCCC
Q 005902 418 LSQVAGLKEYIGANPA 433 (671)
Q Consensus 418 L~~Va~LRe~~~~~~~ 433 (671)
......+-.|+-++|.
T Consensus 147 ~~~~k~ie~yllanp~ 162 (168)
T 3rws_A 147 EGFTKAVESFLLANPD 162 (168)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhChH
Confidence 3345666677777665
No 137
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=26.81 E-value=3.7e+02 Score=24.60 Aligned_cols=119 Identities=10% Similarity=-0.086 Sum_probs=64.9
Q ss_pred EEEEEeecCCHHHHHHH-HHccCCcccccccCC-CCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCC
Q 005902 261 VKAVGVIDASADTVFEV-VLNLERHQRYEWDML-TGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 338 (671)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~-L~d~~~~~R~eWD~~-~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~d 338 (671)
+-.+..+.+||+++|.+ +.|... .++.|-+. +.++++ |-=++.=.|.+..+.... | . -++--|--..++.
T Consensus 6 ~~~ei~i~a~a~kvw~~~v~d~~~-l~pk~~P~~v~s~e~-eGdg~~Gsir~~~~~~g~-~--~---~~~kErl~~iD~~ 77 (154)
T 2vjg_A 6 HSLEITSSVSAEKIFSGIVLDVDT-VIPKAATGAYKSVEV-KGDGGAGTVRIITLPEGS-P--I---TTMTVRTDAVNKE 77 (154)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHH-HHHHHSTTTCSEEEE-ESSSSTTCEEEEECCTTC-S--C---CEEEEEEEEEETT
T ss_pred EEEEEEecCCHHHHHHhhhCCccc-cchhhccCceeEEEE-eCCCCCceEEEEEecCCC-C--c---eEEEEEEEEEecc
Confidence 34455789999999998 788765 45889985 677777 542222235555544321 1 0 1222222222333
Q ss_pred CcEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCc
Q 005902 339 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC 399 (671)
Q Consensus 339 GsYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~ 399 (671)
. ..+.++=++-+ ..+. + + +...+-+-+.|.++ +.|.++|.+..+++|-.
T Consensus 78 ~-~~~~y~iiegd-~l~~-~-~--~~~~~ti~v~p~~~------ggs~v~wt~~y~~~~~~ 126 (154)
T 2vjg_A 78 A-LSYDSTVIDGD-ILLG-F-I--ESIETHMVVVPTAD------GGSITKTTAIFHTKGDA 126 (154)
T ss_dssp T-TEEEEEEEESG-GGTT-T-E--EEEEEEEEEEECTT------SCEEEEEEEEEEESTTC
T ss_pred C-CEEEEEEEecC-CCcc-c-e--EEEEEEEEEEECCC------CcEEEEEEEEEEECCCC
Confidence 2 22222222221 1111 1 1 22344566777543 46999999999988876
No 138
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=26.62 E-value=3.8e+02 Score=24.64 Aligned_cols=149 Identities=9% Similarity=0.001 Sum_probs=78.2
Q ss_pred EEEEeecCCHHHHHHHH-HccCCcccccccCC-CCceEEEEeecCceEEEEEEecCCcCCCCCCCCeEEEEEEEEEcCCC
Q 005902 262 KAVGVIDASADTVFEVV-LNLERHQRYEWDML-TGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 339 (671)
Q Consensus 262 Ka~gvVdaspe~Vfe~L-~d~~~~~R~eWD~~-~~~~eVVE~lD~~tDIvY~~~kp~~~P~~vspRDFV~LRswRr~~dG 339 (671)
-.+..+.+||+++|.++ .|... ..+.|-+. +.+++++|-=++-=.|.+..+.+. .+.+ ++.-|--..++.
T Consensus 6 ~~ei~i~a~a~kvw~~~~~d~~~-l~pk~~P~~i~s~e~~eGdgg~Gsir~~~~~~g-----~~~~-~~kErl~~iD~~- 77 (159)
T 4a8u_A 6 ETEATSVIPAARLFKAFILDGDN-LFPKVAPQAISSVENIEGNGGPGTIKKISFPEG-----FPFK-YVKDRVDEVDHT- 77 (159)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHH-HHHHHCTTTCCEEEEEECSSSTTCEEEEECCTT-----SSCS-EEEEEEEEEETT-
T ss_pred EEEEEecCCHHHHHHHHhcCccc-cchhhCchhccEEEEEcCCCCCceEEEEEEecC-----CCcc-EEEEEEEEEccc-
Confidence 34457899999999999 77764 46789985 688888875322223555555432 1112 333232223333
Q ss_pred cEEEEEeeccCCCCCCCCCeeeEEEcCeeEEEEecCCCCCCCCCceEEEEEEeeecCCCccccccccccchhhhHHHHHH
Q 005902 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLS 419 (671)
Q Consensus 340 sYvIa~~SV~Hp~~Pp~~g~VRAev~~sGylI~P~~~~~~~~~~~c~VT~I~qvDlKGw~~w~p~~~~~~~~~~~~~mL~ 419 (671)
...+.++=++-+ ..+. + + +...+-+-+.|.++ ++|.++|.+..+.+|-.. +.- ..+ +...-.+..
T Consensus 78 ~~~~~y~iiegd-~l~~-~-~--~~y~~ti~v~p~~~------ggs~v~wt~~y~~~~~~~--~~~-~~~-k~~~~~~~~ 142 (159)
T 4a8u_A 78 NFKYSYSVIEGG-PVGD-T-L--EKISNEIKIVATPN------GGSILKINNKYHTKGDHE--VKA-EQI-KASKEMGET 142 (159)
T ss_dssp TTEEEEEEEEET-TCBT-T-E--EEEEEEEEEEECTT------SCEEEEEEEEEEESSSCC--C-C-HHH-HHHHHHHHH
T ss_pred cCEEEEEEeeCC-CCcc-c-e--EEEEEEEEEEECCC------CceEEEEEEEEEECCCCc--CCH-HHH-HHHHHHHHH
Confidence 222222222211 1111 1 1 23345666777543 579999999999886541 110 111 111112233
Q ss_pred HHHHHHHHHhcCCC
Q 005902 420 QVAGLKEYIGANPA 433 (671)
Q Consensus 420 ~Va~LRe~~~~~~~ 433 (671)
....+-.|+-++|.
T Consensus 143 ~~k~ie~yll~np~ 156 (159)
T 4a8u_A 143 LLRAVESYLLAHSD 156 (159)
T ss_dssp HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhhChh
Confidence 34566667766664
No 139
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=22.95 E-value=38 Score=29.27 Aligned_cols=29 Identities=28% Similarity=0.384 Sum_probs=24.4
Q ss_pred EEEEEEeecCCHHHHHHHHHccCCccccccc
Q 005902 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWD 290 (671)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD 290 (671)
.+.....|++||++||++|.|... ..+|-
T Consensus 6 ~i~~~~~i~ap~e~Vw~~ltd~~~--~~~W~ 34 (146)
T 2leq_A 6 IAQVKTVINAPIEKVWEALVNPEI--IKEYM 34 (146)
T ss_dssp EEEEEEEECSCHHHHHHHHSCTTH--HHHHS
T ss_pred eEEEEEEECCCHHHHHHHHcCHHH--hceeE
Confidence 466677899999999999999875 77883
No 140
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=21.74 E-value=82 Score=28.76 Aligned_cols=31 Identities=6% Similarity=0.110 Sum_probs=26.7
Q ss_pred cEEEEEEeecCCHHHHHHHHHccCCcccccccC
Q 005902 259 VLVKAVGVIDASADTVFEVVLNLERHQRYEWDM 291 (671)
Q Consensus 259 ~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~eWD~ 291 (671)
..+.....|++||++||+.|.|... ..+|-.
T Consensus 13 ~~i~~~~~i~Ap~e~Vw~altdp~~--~~~W~~ 43 (164)
T 3pu2_A 13 TRLEFRRHFAATPEQLWAALTSPAL--LPAWLF 43 (164)
T ss_dssp TEEEEEEEESSCHHHHHHHHHCTTT--GGGTSC
T ss_pred ceEEEEEEECCCHHHHHHHhcCHHH--HhhEeC
Confidence 4677788999999999999999885 788865
No 141
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=21.60 E-value=1.6e+02 Score=34.56 Aligned_cols=98 Identities=10% Similarity=0.040 Sum_probs=56.7
Q ss_pred eEEEEEccccccccceeeeeEEEe--CceeeeeccCCCCCCCCcc---ceeeeecCccee------ec-----ccceeee
Q 005902 50 GWVYHMGTNSIGHEYCHLRFLFIR--GKYVEMYKRDPHENPGIKP---IRRGVIGPTLMV------EE-----LGRRRFN 113 (671)
Q Consensus 50 Gw~y~~g~~~~g~~~~~~Ryfvl~--~~~l~~yK~~p~~~~~~~p---ir~~~i~~~~~v------~d-----~Gr~~~~ 113 (671)
..|-++++++- .+ +.|||.|. +..|.++...+.. ...+ ||..-.|..++. -+ ..++...
T Consensus 21 t~~~K~~~~~~--~~-k~~~frLd~d~~~l~W~~~~k~~--~~l~I~~IkeIR~G~~s~~pk~~~~~e~~~~~~~~~~~e 95 (799)
T 2zkm_X 21 ERFIKWDDETT--VA-SPVILRVDPKGYYLYWTYQSKEM--EFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNSFL 95 (799)
T ss_dssp EEEEEECTTTC--CE-EEEEEEECTTSCEEEEEETTSCE--EEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCCGG
T ss_pred CEEEEEcCCCc--ce-eEEEEEEcCCCCEEEEccCCCcC--ceEeeeeeHHhhcCCCCCCCchHHHHHHhcccCcccccc
Confidence 35667665442 23 77999994 5566555433321 1233 555666666642 11 1123344
Q ss_pred CceEEEEEEEeccCc-CcceeeeccCHHHHHHHHHHHHHHHH
Q 005902 114 HGDVYVMRLYNRLDE-SKKGEIACATAGEARKWMEAFDQAKQ 154 (671)
Q Consensus 114 ~~~~yv~~~yn~~~~-~~~~~laa~~~eea~~W~~a~~~a~~ 154 (671)
.+-|-|. |..... -+.+.|.|.+.++|..|+..|+..+.
T Consensus 96 ~~~fTIv--yg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~ 135 (799)
T 2zkm_X 96 LKTLTVV--SGPDMVDLTFHNFVSYKENVGKAWAEDVLALVK 135 (799)
T ss_dssp GTEEEEE--ECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred cceEEEE--ECCCccceeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 4544332 332221 24589999999999999999998776
No 142
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=21.27 E-value=32 Score=30.71 Aligned_cols=28 Identities=11% Similarity=0.184 Sum_probs=23.6
Q ss_pred EEEEEEeecCCHHHHHHHHHccCCcccccc
Q 005902 260 LVKAVGVIDASADTVFEVVLNLERHQRYEW 289 (671)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~eW 289 (671)
.+.....|++||++||+.|.|.+. ..+|
T Consensus 3 ~i~~~~~i~Ap~e~Vw~altdpe~--~~~W 30 (144)
T 2l8o_A 3 KITVEVTVYAAIEKVWKYWNEPAH--IMKW 30 (144)
T ss_dssp SEEEEEEECSCHHHHHHHHHCHHH--HHHH
T ss_pred EEEEEEEECCCHHHHHHHHCCHHH--Hhhc
Confidence 355667899999999999999875 7888
No 143
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=20.88 E-value=2.8e+02 Score=24.59 Aligned_cols=102 Identities=12% Similarity=0.102 Sum_probs=64.3
Q ss_pred CCcceeeeEEEEEccccccccceeeeeEEEeCceeeeeccCCCCCCCCccceeeeecCcceeecccceeeeC-ceEEEEE
Q 005902 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNH-GDVYVMR 121 (671)
Q Consensus 43 ~~~~~~~Gw~y~~g~~~~g~~~~~~Ryfvl~~~~l~~yK~~p~~~~~~~pir~~~i~~~~~v~d~Gr~~~~~-~~~yv~~ 121 (671)
-|...+-||..-.... .=.+.||++|=.+.+=+=|+........-=.|..+--+.+-|+ -+-+ +.-.-|.
T Consensus 7 ~G~Ll~q~~f~V~~~~----~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lt-----e~~~~~d~~kFe 77 (119)
T 1fho_A 7 LGRIIRHDAFQVWEGD----EPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIR-----QHTTDEDTIVLQ 77 (119)
T ss_dssp CCCSSEEEEEEECSTT----CSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEE-----EECTTCCEEEEE
T ss_pred cCCccccCceEEEeCC----CCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeeceeEEE-----ecCCCCCCcEEE
Confidence 3555677888776442 2268899999887776666552221122223444444444444 4444 4556789
Q ss_pred EEeccCcCcceee--eccCHH-HHHHHHHHHHHHHH
Q 005902 122 LYNRLDESKKGEI--ACATAG-EARKWMEAFDQAKQ 154 (671)
Q Consensus 122 ~yn~~~~~~~~~l--aa~~~e-ea~~W~~a~~~a~~ 154 (671)
||++.... ...+ -|.|.| .-..|++.|+++.+
T Consensus 78 iw~~~~~~-~~il~~qA~s~e~~K~~Wv~~I~~~~~ 112 (119)
T 1fho_A 78 PQEPGLPS-FRIKPKDFETSEYVRKAWLRDIAEEQE 112 (119)
T ss_dssp CCSTTCCC-BCCCCCSSSSCSHHHHHHHHHHHTCCH
T ss_pred EccCCCCc-eEEEeeecCCcHHHHHHHHHHHHHHHH
Confidence 98877544 4445 788999 99999999998544
Done!