Your job contains 1 sequence.
>005906
MWQPADPVPKFCPEVIRKYLSIKGTQHPALIVNVRRHLKHLGWTIEYSSSKGVFRYTSPN
GNPYLSLSQVCRELGDSVDDVPSEVSHDKVVNIPPQHCPEAVVFWYEHGLEKKNKSNRDM
LLKAKMHLLSLGWSFWYTTKGNRRELRYTSPSGAVYISLRTACKACMDEGLDSKGMVSCN
KSPSATTSTKHGEDSEVSQTNKKRKKNLMNKNNQPLVDGKLGRPIQDDQKRTAVLRSSKR
ARSPERFASPSNCKPRTILSWLIDNNGVLPEAKVHYRGRNGPLAKGQIRRDGIKCDCCSK
VFTLSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQN
DEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSCCCRICGIGKRKFEEKTE
HSVDDVLRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCEVISSCLHEILDKPFQ
LGVDDLTWRLLKSMEVRDHHGPSNSKEMEEALMENQSKLSVALDVMHECFEPIKDVLTER
DLVEDVIFNRRSDLNRLNFQGFYTILLERNEEVISVRRMKHRRLGMCRVLMNELEKLLIE
LGVERLVLPAVPGVVDTWTNKFGFSKMTESERLQYSDYTFLDFQDTTMCQKLLRKVPLSA
LESLLPWKQR
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005906
(670 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2201021 - symbol:AT1G05380 "AT1G05380" species... 688 3.2e-71 2
TAIR|locus:2163961 - symbol:AT5G63900 "AT5G63900" species... 586 2.3e-70 2
TAIR|locus:2178828 - symbol:AT5G58610 "AT5G58610" species... 706 3.6e-69 1
TAIR|locus:2086395 - symbol:ROS4 "AT3G14980" species:3702... 612 1.1e-58 1
TAIR|locus:2147391 - symbol:AT5G36740 species:3702 "Arabi... 469 1.6e-56 3
TAIR|locus:2832118 - symbol:AT5G36670 species:3702 "Arabi... 469 9.7e-46 3
TAIR|locus:2040550 - symbol:AT2G36720 "AT2G36720" species... 202 2.3e-22 2
ZFIN|ZDB-GENE-030131-5913 - symbol:trim24 "tripartite mot... 150 1.2e-07 2
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 159 1.4e-07 1
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 159 1.4e-07 1
UNIPROTKB|Q5TH12 - symbol:ZMYND8 "Protein kinase C-bindin... 130 1.8e-07 1
UNIPROTKB|F1NX82 - symbol:PHF21B "Uncharacterized protein... 146 1.9e-07 2
ZFIN|ZDB-GENE-071008-4 - symbol:aire "autoimmune regulato... 151 2.2e-07 3
UNIPROTKB|C9JFR1 - symbol:AIRE "Autoimmune regulator" spe... 144 2.7e-07 1
MGI|MGI:2137357 - symbol:Trim33 "tripartite motif-contain... 155 3.5e-07 1
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 152 5.3e-07 1
UNIPROTKB|H7C2H0 - symbol:CHD3 "Chromodomain-helicase-DNA... 148 6.8e-07 1
UNIPROTKB|F1LPP8 - symbol:Chd3 "Protein Chd3" species:101... 148 7.4e-07 2
ZFIN|ZDB-GENE-121031-4 - symbol:chd3 "chromodomain helica... 146 8.0e-07 1
UNIPROTKB|C9JL37 - symbol:AIRE "Autoimmune regulator" spe... 144 8.0e-07 1
UNIPROTKB|I3LF49 - symbol:I3LF49 "Uncharacterized protein... 148 8.2e-07 1
UNIPROTKB|F1SJU8 - symbol:PHF21B "Uncharacterized protein... 145 1.1e-06 1
UNIPROTKB|J3QQU3 - symbol:PHF12 "PHD finger protein 12" s... 122 1.3e-06 1
MGI|MGI:1276545 - symbol:Nsd1 "nuclear receptor-binding S... 156 1.3e-06 2
UNIPROTKB|F1N7W5 - symbol:LOC788840 "Uncharacterized prot... 149 1.4e-06 2
UNIPROTKB|F1MNE1 - symbol:TRIM33 "Uncharacterized protein... 149 1.5e-06 1
UNIPROTKB|O43918 - symbol:AIRE "Autoimmune regulator" spe... 145 1.5e-06 1
UNIPROTKB|I3LBT0 - symbol:I3LBT0 "Uncharacterized protein... 148 1.6e-06 1
UNIPROTKB|I3LD78 - symbol:I3LD78 "Uncharacterized protein... 148 1.6e-06 1
UNIPROTKB|B1AHC5 - symbol:PHF21B "cDNA FLJ34161 fis, clon... 141 1.6e-06 1
UNIPROTKB|F1PLN6 - symbol:TRIM33 "Uncharacterized protein... 148 1.7e-06 1
DICTYBASE|DDB_G0277341 - symbol:DDB_G0277341 "PHD zinc fi... 150 1.8e-06 3
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 154 1.9e-06 2
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 159 2.0e-06 3
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 158 2.2e-06 2
UNIPROTKB|F1PPM4 - symbol:AIRE "Uncharacterized protein" ... 152 2.2e-06 2
TAIR|locus:2169779 - symbol:ATXR6 "AT5G24330" species:370... 140 2.4e-06 1
RGD|1307339 - symbol:Trim33 "tripartite motif-containing ... 147 2.5e-06 1
MGI|MGI:2142581 - symbol:Whsc1l1 "Wolf-Hirschhorn syndrom... 148 2.6e-06 1
RGD|1306330 - symbol:Ing1 "inhibitor of growth family, me... 119 2.7e-06 1
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 159 2.9e-06 3
RGD|1311139 - symbol:Aire "autoimmune regulator" species:... 142 3.3e-06 1
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 155 3.5e-06 3
MGI|MGI:1338803 - symbol:Aire "autoimmune regulator (auto... 143 4.1e-06 2
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 155 4.5e-06 2
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 155 4.6e-06 2
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 162 4.7e-06 2
UNIPROTKB|F1SNJ6 - symbol:LOC100620590 "Uncharacterized p... 136 4.7e-06 1
UNIPROTKB|I3LQA6 - symbol:AIRE "Uncharacterized protein" ... 149 5.1e-06 2
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 161 5.1e-06 2
UNIPROTKB|E7EN20 - symbol:TRIM33 "E3 ubiquitin-protein li... 142 5.2e-06 1
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 155 5.2e-06 3
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 155 5.2e-06 3
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 155 5.2e-06 3
UNIPROTKB|F1NRM1 - symbol:F1NRM1 "Uncharacterized protein... 140 5.2e-06 1
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 159 5.3e-06 3
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 155 5.4e-06 3
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 155 5.4e-06 3
UNIPROTKB|F1P5H8 - symbol:TRIM33 "Uncharacterized protein... 143 5.4e-06 1
RGD|1307748 - symbol:Nsd1 "nuclear receptor binding SET d... 156 5.7e-06 2
UNIPROTKB|F1S3C1 - symbol:NSD1 "Uncharacterized protein" ... 156 5.8e-06 2
UNIPROTKB|J9NVX7 - symbol:NSD1 "Uncharacterized protein" ... 156 6.0e-06 2
UNIPROTKB|J9P6F3 - symbol:WHSC1L1 "Uncharacterized protei... 142 6.0e-06 1
UNIPROTKB|H0Y612 - symbol:TRIM33 "E3 ubiquitin-protein li... 142 6.4e-06 1
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 159 6.6e-06 3
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 159 6.8e-06 3
UNIPROTKB|E1C6X8 - symbol:WHSC1L1 "Uncharacterized protei... 144 7.0e-06 1
UNIPROTKB|D4A3R4 - symbol:Whsc1l1 "Protein Whsc1l1" speci... 144 7.0e-06 1
RGD|1308980 - symbol:Whsc1l1 "Wolf-Hirschhorn syndrome ca... 144 7.0e-06 1
UNIPROTKB|E1BIC4 - symbol:AIRE "Uncharacterized protein" ... 139 7.2e-06 1
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 158 7.3e-06 2
UNIPROTKB|Q96L73 - symbol:NSD1 "Histone-lysine N-methyltr... 156 7.4e-06 2
UNIPROTKB|E2R3Q9 - symbol:NSD1 "Uncharacterized protein" ... 156 7.5e-06 2
UNIPROTKB|E1BM66 - symbol:NSD1 "Uncharacterized protein" ... 156 7.5e-06 2
UNIPROTKB|Q96EK2 - symbol:PHF21B "PHD finger protein 21B"... 141 7.5e-06 2
UNIPROTKB|F1NMG7 - symbol:F1NMG7 "Uncharacterized protein... 139 7.6e-06 1
UNIPROTKB|Q9UPN9 - symbol:TRIM33 "E3 ubiquitin-protein li... 142 8.6e-06 1
UNIPROTKB|E2QUJ0 - symbol:WHSC1L1 "Uncharacterized protei... 142 1.1e-05 1
ZFIN|ZDB-GENE-120215-66 - symbol:si:ch73-202g8.3 "si:ch73... 139 1.2e-05 1
UNIPROTKB|K7EQP5 - symbol:PHF12 "PHD finger protein 12" s... 113 1.2e-05 1
UNIPROTKB|K7EJ43 - symbol:PHF12 "PHD finger protein 12" s... 127 1.6e-05 1
UNIPROTKB|B7ZL11 - symbol:WHSC1L1 "Histone-lysine N-methy... 140 1.9e-05 1
UNIPROTKB|Q9BZ95 - symbol:WHSC1L1 "Histone-lysine N-methy... 140 1.9e-05 1
WB|WBGene00002637 - symbol:let-418 species:6239 "Caenorha... 141 1.9e-05 1
UNIPROTKB|G5EBZ4 - symbol:let-418 "Protein let-418" speci... 141 1.9e-05 1
UNIPROTKB|H0YF52 - symbol:TRIM66 "Tripartite motif-contai... 130 1.9e-05 1
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 155 2.0e-05 2
UNIPROTKB|H0Y9U6 - symbol:WHSC1 "Histone-lysine N-methylt... 128 2.0e-05 2
SGD|S000004680 - symbol:RCO1 "Essential subunit of the hi... 133 2.1e-05 2
UNIPROTKB|O15164 - symbol:TRIM24 "Transcription intermedi... 138 2.1e-05 1
UNIPROTKB|H0Y4R8 - symbol:SP100 "Nuclear autoantigen Sp-1... 128 2.5e-05 1
UNIPROTKB|F1N9E9 - symbol:Gga.18314 "Uncharacterized prot... 140 2.9e-05 1
UNIPROTKB|F1P4C7 - symbol:TRIM24 "Uncharacterized protein... 136 3.0e-05 1
UNIPROTKB|F1N972 - symbol:Gga.18314 "Uncharacterized prot... 140 3.0e-05 1
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 155 3.3e-05 3
MGI|MGI:109275 - symbol:Trim24 "tripartite motif-containi... 136 3.5e-05 1
UNIPROTKB|E2RNG5 - symbol:LOC609728 "Uncharacterized prot... 136 3.5e-05 1
UNIPROTKB|F1MP49 - symbol:TRIM24 "Uncharacterized protein... 136 3.5e-05 1
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 137 4.2e-05 1
MGI|MGI:1919027 - symbol:Ing3 "inhibitor of growth family... 130 4.3e-05 1
WARNING: Descriptions of 131 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2201021 [details] [associations]
symbol:AT1G05380 "AT1G05380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IC;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC005106 HSSP:Q14839
IPI:IPI00532257 RefSeq:NP_001117233.1 RefSeq:NP_563736.3
UniGene:At.15326 ProteinModelPortal:Q9ZW00 SMR:Q9ZW00 PRIDE:Q9ZW00
EnsemblPlants:AT1G05380.1 EnsemblPlants:AT1G05380.2 GeneID:837039
KEGG:ath:AT1G05380 TAIR:At1g05380 InParanoid:Q9ZW00 OMA:RIRSSIK
PhylomeDB:Q9ZW00 ProtClustDB:CLSN2699134 Genevestigator:Q9ZW00
Uniprot:Q9ZW00
Length = 1138
Score = 688 (247.2 bits), Expect = 3.2e-71, Sum P(2) = 3.2e-71
Identities = 161/453 (35%), Positives = 239/453 (52%)
Query: 222 GRPIQDDQKRTAVLRSSKRARSPE-RFASPSNCKPRTILSWLIDNNGVLPEAKVHYRGRN 280
GR + + T ++RSSK ++P +P + K RT+LSWLI++ V KV Y R
Sbjct: 484 GRKTKKIGRCTLLVRSSKDKKNPAINGFNPYSGK-RTLLSWLIESGVVQLRQKVQYMRRR 542
Query: 281 GP--LAKGQIRRDGIKCDCCSKVFTLSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKI 338
G + +G I R+GI CDCCSK+ T+S FE HAGS+ +P NI L E G LL+CQ +
Sbjct: 543 GAKVMLEGWITREGIHCDCCSKILTVSRFEIHAGSKSCQPFQNIYL-ESGASLLQCQVRA 601
Query: 339 LCKNRSSTR-SQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGN 397
+ +T + H T + ND+ C IC GG+L+ CD CPS++H++CL + LP G+
Sbjct: 602 WNMQKDATNLALHQVDTDGDDPNDDACGICGDGGDLICCDGCPSTYHQNCLGMQVLPSGD 661
Query: 398 WFCPSCCCRICGIGKRKFEEKTEHSVDDVLRICGQCEHNFHVGCIEKSRAINLNNCSQNK 457
W CP+C C+ C K + + L CG CE +H C+ A + +
Sbjct: 662 WHCPNCTCKFCDAAVAS-GGKDGNFIS--LLSCGMCERRYHQLCLN-DEAHKVQSFGSAS 717
Query: 458 WFCSDGCEVISSCLHEILDKPFQLGVDDLTWRLLKSMEVRDHHGPSNSKEMEEALMENQS 517
FC C + L + L ++ +W L+ + D +NS +M +EN S
Sbjct: 718 SFCGPKCLELFEKLQKYLGVKTEIE-GGYSWSLIHRV---DTDSDTNS-QMSAQRIENNS 772
Query: 518 KLSVALDVMHECFEPIKDVLTERDLVEDVIFNRRSDLNRLNFQGFYTILLERNEEVISVR 577
KL+V L +M ECF PI D + DL+ +V++N S+ NR+N+ GFYT +LER +E+IS
Sbjct: 773 KLAVGLAIMDECFLPIVDRRSGVDLIRNVLYNCGSNFNRINYTGFYTAILERGDEIISAA 832
Query: 578 RMK-----------------HRRLGMCRVLMNELEKLLIELGVERLVLPAVPGVVDTWTN 620
++ +RR GMCR L + +E + L VE+LV+PA+P + WT
Sbjct: 833 SLRFHGMQLAEMPFIGTRHIYRRQGMCRRLFDAIESAMRSLKVEKLVIPAIPDFLHAWTG 892
Query: 621 KFGFSKMTESERLQYSDYTFLDFQDTTMCQKLL 653
FGF+ + +S R + L F M QK L
Sbjct: 893 NFGFTPLDDSVRKEMRSLNTLVFPGIDMLQKPL 925
Score = 66 (28.3 bits), Expect = 3.2e-71, Sum P(2) = 3.2e-71
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 123 KAKMHLLSLGWSFWYTTKGNRRELR--YTSPSGAVYISLRTACKACM----DEGLDSK 174
+ K L GW+ Y + N+ L Y +PSG Y S+ A A + DEG+D++
Sbjct: 318 RIKGMLTDAGWTIDYKPRRNQSYLDAVYVNPSGTAYWSIIKAYDALLKQLKDEGVDAR 375
Score = 55 (24.4 bits), Expect = 4.6e-70, Sum P(2) = 4.6e-70
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 24 GTQHPALIVNVRRHLKHLGWTIEYSSSKGVFR----YTSPNGNPYLSL 67
GT L ++ L GWTI+Y + Y +P+G Y S+
Sbjct: 309 GTDKQRLRERIKGMLTDAGWTIDYKPRRNQSYLDAVYVNPSGTAYWSI 356
>TAIR|locus:2163961 [details] [associations]
symbol:AT5G63900 "AT5G63900" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008080
"N-acetyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS51186 SMART:SM00184 SMART:SM00249 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 EMBL:AB007646
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008080 HSSP:Q14839 EMBL:AB493810
IPI:IPI00518981 RefSeq:NP_201195.1 UniGene:At.55695
ProteinModelPortal:Q9FMZ9 SMR:Q9FMZ9 EnsemblPlants:AT5G63900.1
GeneID:836510 KEGG:ath:AT5G63900 TAIR:At5g63900 eggNOG:NOG244493
HOGENOM:HOG000152567 InParanoid:Q9FMZ9 OMA:NSKLMAC PhylomeDB:Q9FMZ9
ProtClustDB:CLSN2914816 Genevestigator:Q9FMZ9 Uniprot:Q9FMZ9
Length = 557
Score = 586 (211.3 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 139/374 (37%), Positives = 204/374 (54%)
Query: 310 HAGSQKHRPTANIILNEGGKP-LLECQKKILC---KNRSSTRSQHDSITSDEKQ-----N 360
H +K R A+ E +P +++ KK+L K + + + +S+ K N
Sbjct: 199 HEQQKKRRKMAS---EEIRRPKMVKSLKKVLQVMEKKQQKNKHEKESLRFCRKDCSPDMN 255
Query: 361 DEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGN-WFCPSCCCRICGIGKRKFEEKT 419
++C +C +GG+L+LCD CPS+FH +CL L+ LP+ + WFCP CCC ICG
Sbjct: 256 CDVCCVCHWGGDLLLCDGCPSAFHHACLGLSSLPEEDLWFCPCCCCDICG--------SM 307
Query: 420 EHSVDDVLRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCEVISSCLHEILDKPF 479
E + L C QC+ FH+ C+++ I S WFCS C + S L +L
Sbjct: 308 ESPANSKLMACEQCQRRFHLTCLKEDSCI----VSSRGWFCSSQCNRVFSALENLLGSKI 363
Query: 480 QLGVD-DLTWRLLKSMEVRDHHGPSNSKEMEEALMENQSKLSVALDVMHECFEPIKDVLT 538
+G D DL W L+++ P+ + ++ E SKL A++++H+ FEP DV +
Sbjct: 364 AVGNDGDLVWTLMRA--------PNEGEHYDD---EQISKLESAVEILHQGFEPTNDVFS 412
Query: 539 ERDLVEDVIFNR-RSDLNRLNFQGFYTILLERNEEVISVRRMK----------------H 581
RDLVE++I+ + R+ + R GFYT+L+ER E I+V ++ +
Sbjct: 413 GRDLVEELIYRKDRTGVGR----GFYTVLIERKNEPITVAAVRVDKDVVEIPLVATLSSY 468
Query: 582 RRLGMCRVLMNELEKLLIELGVERLVLPAVPGVVDTWTNKFGFSKMTESERLQYSDYTFL 641
RR GMCRVLM+ELEK + ++GV RLVLPA VV TWT +FGFS M SERL+ + L
Sbjct: 469 RRSGMCRVLMDELEKQMSQMGVCRLVLPAAKEVVTTWTERFGFSVMNSSERLELVKHGML 528
Query: 642 DFQDTTMCQKLLRK 655
DF T MC K L+K
Sbjct: 529 DFVGTIMCHKFLQK 542
Score = 145 (56.1 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 90 VVNIPPQHCPEAVVFWY---EHGLEKKNKSNR-DMLLKAKMHLLSLGWSFWYTTKGNRRE 145
+V + + P A+ W +HG +N R D+ +K K HL +LGW Y K N++E
Sbjct: 6 IVPMEAELSPGAIEEWLSTVKHGKMTENGKRRSDLSIKVKRHLSALGWVISYYNKRNKKE 65
Query: 146 LRYTSPSGAVYISLRTACKACMDE 169
RY SP G + SL AC +C+D+
Sbjct: 66 QRYKSPKGKWFYSLAKACMSCVDQ 89
Score = 94 (38.1 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 24 GTQHPALIVNVRRHLKHLGWTIEYSS--SKGVFRYTSPNGNPYLSLSQVCRELGD 76
G + L + V+RHL LGW I Y + +K RY SP G + SL++ C D
Sbjct: 34 GKRRSDLSIKVKRHLSALGWVISYYNKRNKKEQRYKSPKGKWFYSLAKACMSCVD 88
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 706 (253.6 bits), Expect = 3.6e-69, P = 3.6e-69
Identities = 174/450 (38%), Positives = 252/450 (56%)
Query: 231 RTAVLRSSKRARSPERFASPSNCK--PRTILSWLIDNNGVLPEAKVHYRGRNGPLAK--G 286
+T VLRS KRA +R +P + K PR ILSWL+DNN VLP + + + G
Sbjct: 564 KTRVLRSRKRA---QRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKEG 620
Query: 287 QIRRDGIKCDCCSKVFTLSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSST 346
++ R+GIKC CC +VFT++GFE HA ANI L++G + LLECQ + K + +
Sbjct: 621 KLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDG-RSLLECQVEAYKKRKKAQ 679
Query: 347 RSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSCCCR 406
+ + +ND CS+C YGG+L+LCD CPS+FH +CL L D+P G+WFC SCCC
Sbjct: 680 PPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCG 739
Query: 407 ICGIGKRKFEEKTE--HSVDDVLRICGQCEHNFHVGCIEKSRAIN-LNNCSQNKWFCSDG 463
CG +F KT ++ ++ C QCE +H C+ A + L+ KWFCS
Sbjct: 740 ACG----QFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKD 795
Query: 464 CEVISSCLHEILDKPFQLGVDDLTWRLLKSMEVRDHHGPSNSKEMEEALMENQSK----L 519
CE E L+ P G DD + ++ + E +H S + ++ L E +
Sbjct: 796 CE-------ESLE-PNMYG-DDAS-KIEAAAE--NHCILSVALDVMHELFEPVKRPHGGR 843
Query: 520 SVALDVMHECFEPIKDVLTERDLVEDVIFNRRSDLNRLNFQGFYTILLERNEEVISV-RR 578
+A DV+ + K + V+ R ++L + IL ++ E+ + R
Sbjct: 844 DLAEDVIFSRWSKFKRLNFSGFYT--VLLERNNELVSV---ATVRILGKKVAEMPFIGTR 898
Query: 579 MKHRRLGMCRVLMNELEKLLIELGVERLVLPAVPGVVDTWTNKFGFSKMTESERLQYSDY 638
+HR+ GMCRVL+NELEK+LI+LGVERLVLPAVP V++TW N FGF+KMT SER + +
Sbjct: 899 FQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPCVLNTWINSFGFTKMTISERKNFLKF 958
Query: 639 TFLDFQDTTMCQKLLRKV----PLSALESL 664
T L+F T +C+K+L K P+ ++ SL
Sbjct: 959 TLLEFGRTILCEKILIKSGVADPIPSIASL 988
Score = 579 (208.9 bits), Expect = 2.7e-55, P = 2.7e-55
Identities = 159/483 (32%), Positives = 233/483 (48%)
Query: 1 MWQPADPVPKFCPEVIRKYLSIKGTQHPALIVNVRRHLKHLGWTIEY---SSSKGVFRYT 57
+W P D + K P+ + + I+ P + ++VR HLK++GWTIE+ + + FRY
Sbjct: 339 IWHPFDCLAKSGPQAVSSF--IRSPLLP-MAMHVRMHLKYMGWTIEHMVDEAGRQRFRYL 395
Query: 58 SPNGN-PYLSLSQVCRELGDSVDDVPSEVSHDKVVNIPPQHCPEAVVFWYEHGLE---KK 113
SPNG SL QVC L ++ + N PP E + +
Sbjct: 396 SPNGRLKEHSLRQVCFRLKQP----DKSLTTPGMAN-PPSLSSENQTYSTQEMRSIVLAL 450
Query: 114 NKSNRDMLLKAKMHLLSLGWSFWYTTKGNR----RELRYTSPSGAVYISLRTACKACMDE 169
NR + L + L S Y T+GN RE R P A + + + ++
Sbjct: 451 PAFNRSVALGEGLKL-STDTLLEYETQGNEEVFTRESRNFCPKKA-FPGQKETLRVRIEP 508
Query: 170 GLDSKGMVSCNKSPSATTSTKHGEDSEVSQTXXXXXXXXXXXXXQPLVDGKLGRPIQDDQ 229
++G++ KS T K D + + L+D K R +
Sbjct: 509 KTKAQGIILRLKSKRKQTPKK---DEVIVGLQNVNRSMRRGHTSKKLMDIK-NRVTS--R 562
Query: 230 KRTAVLRSSKRARSPERFASPSNCK--PRTILSWLIDNNGVLPEAKVHYRGRNGPLAK-- 285
+T VLRS KRA +R +P + K PR ILSWL+DNN VLP + + +
Sbjct: 563 GKTRVLRSRKRA---QRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKE 619
Query: 286 GQIRRDGIKCDCCSKVFTLSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSS 345
G++ R+GIKC CC +VFT++GFE HA ANI L++G + LLECQ + K + +
Sbjct: 620 GKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDG-RSLLECQVEAYKKRKKA 678
Query: 346 TRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSCCC 405
+ + +ND CS+C YGG+L+LCD CPS+FH +CL L D+P G+WFC SCCC
Sbjct: 679 QPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCC 738
Query: 406 RICGIGKRKFEEKTE--HSVDDVLRICGQCEHNFHVGCIEKSRAIN-LNNCSQNKWFCSD 462
CG +F KT ++ ++ C QCE +H C+ A + L+ KWFCS
Sbjct: 739 GACG----QFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSK 794
Query: 463 GCE 465
CE
Sbjct: 795 DCE 797
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 612 (220.5 bits), Expect = 1.1e-58, P = 1.1e-58
Identities = 162/526 (30%), Positives = 253/526 (48%)
Query: 158 SLRTACKACMDEGLDSKGMVS--CNKSPSATTSTKH-GEDSEVSQTXXXXXXXXXXXXXQ 214
++ K DE L ++ M + CN + KH +D ++ + Q
Sbjct: 515 NIHLVSKGSRDERLRNEKMNNSCCNSKKGRKKARKHYTQDDDLMGSTITRNKGKFSRSSQ 574
Query: 215 PLVDGKLGRPIQDDQKRT------AVLRSSKRARSPERFASPSNCKPRTILSWLIDNNGV 268
K +P +KR + RSS + + S PRT+LSWLI +
Sbjct: 575 KK---KTQKPKARTKKRNNRGGCRLLPRSSSNVENHFFQGNWSILGPRTVLSWLIATKVI 631
Query: 269 LPEAKVHYRGRNGP-LAK-GQIRRDGIKCDCCSKVFTLSGFEAHAGSQKHRPTANIILNE 326
+ + R + + K G + +DG+ C CC+K +LS F+ HAG ++ P N+ +
Sbjct: 632 SRDEVIQLRDPDDDTVVKTGLVTKDGVVCTCCNKTVSLSEFKNHAGFNQNCPCLNLFMGS 691
Query: 327 GGKPLLECQKKILCKNRSSTRSQHD-SITSDEKQNDEICSICQYGGELVLCDDCPSSFHK 385
G KP CQ + + R+ SD+ ND+ C +C GGEL+ CD+CPS+FH+
Sbjct: 692 G-KPFASCQLEAWSAEYKARRNGWRLEKASDDDPNDDSCGVCGDGGELICCDNCPSTFHQ 750
Query: 386 SCLVLNDLPKGNWFCPSCCCRICGIGKRKFEEKTEHSVDDVLRICGQCEHNFHVGCIEK- 444
+CL + LP+G+W+C SC C IC + E S D C QC H +H C++
Sbjct: 751 ACLSMQVLPEGSWYCSSCTCWICS---ELVSDNAERSQDFK---CSQCAHKYHGTCLQGI 804
Query: 445 SRAINLNNCSQNKWFCSDGCEVISSCLHEILDKPFQLGVDDLTWRLLKSMEVRDHHGPSN 504
S+ L +FC CE + + L + D L+W +LK + D G +
Sbjct: 805 SKRRKL---FPETYFCGKNCEKVYNGLSSRVGI-INPNADGLSWSILKCFQ-ED--GMVH 857
Query: 505 SKEMEEALMENQSKLSVALDVMHECFEPIKDVLTERDLVEDVIFNRRSDLNRLNFQGFYT 564
S E SKL+VAL +M E F + D T D++ V++N S RL+F GFYT
Sbjct: 858 SARRLALKAECNSKLAVALSIMEESFLSMVDPRTGIDMIPHVLYNWGSTFARLDFDGFYT 917
Query: 565 ILLERNEEVISVRRM-----------------KHRRLGMCRVLMNELEKLLIELGVERLV 607
+++E+++ +ISV + K+RR GMCR+L+ +E++L+ L VE+LV
Sbjct: 918 VVVEKDDVMISVASIRVHGVTIAEMPLVATCSKYRRQGMCRILVAAIEEMLMSLKVEKLV 977
Query: 608 LPAVPGVVDTWTNKFGFSKMTESERLQYSDYTFLDFQDTTMCQKLL 653
+ A+P +V+TWT FGF M + ER + F TT+ +K L
Sbjct: 978 VAALPSLVETWTEGFGFKPMDDEERDALKRINLMVFPGTTLLKKTL 1023
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 469 (170.2 bits), Expect = 1.6e-56, Sum P(3) = 1.6e-56
Identities = 117/375 (31%), Positives = 192/375 (51%)
Query: 219 GKLGRPIQDDQKR-TAVLRSS-KRARSPERFASPSNCKPRTILSWLIDNNGVLPEAKVHY 276
GK+ R + +KR T RSS K S E K RT+L W+ID+ V KV
Sbjct: 505 GKIKREEKHSRKRCTPSARSSLKDVDSKEDGYILFEGK-RTMLGWMIDSTIVPLNGKVQC 563
Query: 277 RG--RNGPLAKGQIRRDGIKCDCCSKVFTLSGFEAHAGSQKHRPTANIILNEGGKPLLEC 334
+ L +G I ++GI+C+CC +VF++ FE HAG +++P ++ L EGG LL+C
Sbjct: 564 MDCKKTDILLEGIITKEGIRCNCCDEVFSVLDFEVHAGGNRNQPFKSLYL-EGGNSLLQC 622
Query: 335 QKKILCK-NRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDL 393
+ + K + S + H ND+ C IC GG+L+ CD CPS+FH+SCL +
Sbjct: 623 LHESMNKQSESQLKGYHFVDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKF 682
Query: 394 PKGNWFCPSCCCRICGIGKR-KFEEKTEHSVDDVLRICGQ-CEHNF------HVGCIEKS 445
P G W+C +C C+ C + K E T S+ R+C + C ++ H CI +
Sbjct: 683 PSGAWYCYNCSCKFCEKDEAAKHETSTLPSLSSC-RLCEEKCSKHYPHTLADHQACINQD 741
Query: 446 RAINLNNCSQNKWFCSDGCEVISSCLHEILDKPFQLGVDDLTWRLLKSMEVRDHHGPSNS 505
+ + + FC C+ + L + L + +W L+ E+
Sbjct: 742 GTVPGERSTDS--FCGKYCQELFEELQLFIGVKHPLP-EGFSWSFLRRFELPSEVADC-- 796
Query: 506 KEMEEALMENQSKLSVALDVMHECFEPIKDVLTERDLVEDVIFNRRSDLNRLNFQGFYTI 565
++ E + N +K++VA VM ECF P+ D + +L++++++N S+ +RL+F F T
Sbjct: 797 -DISEKIAYN-AKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTA 854
Query: 566 LLERNEEVISVRRMK 580
+LER +E+I+V ++
Sbjct: 855 VLERGDEIIAVASIR 869
Score = 162 (62.1 bits), Expect = 1.6e-56, Sum P(3) = 1.6e-56
Identities = 34/78 (43%), Positives = 48/78 (61%)
Query: 578 RMKHRRLGMCRVLMNELEKLLIELGVERLVLPAVPGVVDTWTNKFGFSKMTESERLQYSD 637
R +RR GMCR LM+ +E L L V++LV+PAVP ++DTWT+ FGF+ + +SE+ +
Sbjct: 884 RYMYRRQGMCRRLMDGIESALGSLKVDKLVIPAVPELIDTWTSGFGFAPVNDSEKKTIKN 943
Query: 638 YTFLDFQDTTMCQKLLRK 655
L F M K L K
Sbjct: 944 LNLLVFPGVDMLGKSLVK 961
Score = 64 (27.6 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 48/188 (25%), Positives = 72/188 (38%)
Query: 108 HGLEKKNKSNRDMLLKAKMHLLSLGWSFWYTTKGNR--RELRYTSPSGAVYISLRTACKA 165
H K K D +L+ LL+ GW+ Y + R ++ Y +P G + S+ A +
Sbjct: 383 HSRSKSKKMLSDRILQL---LLTAGWTVEYRPRNGRAYQDAVYLNPEGKTHWSVTKAYQV 439
Query: 166 CMDEGLDSKGMVSCNKSPSATTSTKHG----EDSEVSQTXXXXXXXXXXXXXQPLVD--- 218
+ L+S N ++TT + G ED + + L D
Sbjct: 440 YKKQ-LESNP----NDQKNSTTGSGFGLLPEEDLHLLERTIQKKRSDTGKQRSKLKDRDT 494
Query: 219 ----------GKLGRPIQDDQKR-TAVLRSS-KRARSPERFASPSNCKPRTILSWLIDNN 266
GK+ R + +KR T RSS K S E K RT+L W+ID+
Sbjct: 495 NDILVSTKGTGKIKREEKHSRKRCTPSARSSLKDVDSKEDGYILFEGK-RTMLGWMIDST 553
Query: 267 GVLPEAKV 274
V KV
Sbjct: 554 IVPLNGKV 561
Score = 52 (23.4 bits), Expect = 1.6e-56, Sum P(3) = 1.6e-56
Identities = 18/88 (20%), Positives = 35/88 (39%)
Query: 42 GWTIEYSSSKG-VFR---YTSPNGNPYLSLSQVCRELGDSVDDVPSEVSHDKVVNIPPQH 97
GWT+EY G ++ Y +P G + S+++ + ++ P++ +
Sbjct: 404 GWTVEYRPRNGRAYQDAVYLNPEGKTHWSVTKAYQVYKKQLESNPND-QKNSTTGSGFGL 462
Query: 98 CPEAVVFWYEHGLEKKNKSNRDMLLKAK 125
PE + E ++KK K K
Sbjct: 463 LPEEDLHLLERTIQKKRSDTGKQRSKLK 490
Score = 45 (20.9 bits), Expect = 8.5e-56, Sum P(3) = 8.5e-56
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 75 GDSVDDVPSEVSHDKVVNIPPQ 96
G SVD+V EV + V ++ P+
Sbjct: 93 GSSVDEVKEEVKQECVKSLVPE 114
Score = 37 (18.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 10 KFCPEVIRKYLSIKGTQHP 28
K+C E+ + G +HP
Sbjct: 756 KYCQELFEELQLFIGVKHP 774
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 469 (170.2 bits), Expect = 9.7e-46, Sum P(3) = 9.7e-46
Identities = 117/375 (31%), Positives = 192/375 (51%)
Query: 219 GKLGRPIQDDQKR-TAVLRSS-KRARSPERFASPSNCKPRTILSWLIDNNGVLPEAKVHY 276
GK+ R + +KR T RSS K S E K RT+L W+ID+ V KV
Sbjct: 505 GKIKREEKHSRKRCTPSARSSLKDVDSKEDGYILFEGK-RTMLGWMIDSTIVPLNGKVQC 563
Query: 277 RG--RNGPLAKGQIRRDGIKCDCCSKVFTLSGFEAHAGSQKHRPTANIILNEGGKPLLEC 334
+ L +G I ++GI+C+CC +VF++ FE HAG +++P ++ L EGG LL+C
Sbjct: 564 MDCKKTDILLEGIITKEGIRCNCCDEVFSVLDFEVHAGGNRNQPFKSLYL-EGGNSLLQC 622
Query: 335 QKKILCK-NRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDL 393
+ + K + S + H ND+ C IC GG+L+ CD CPS+FH+SCL +
Sbjct: 623 LHESMNKQSESQLKGYHFVDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKF 682
Query: 394 PKGNWFCPSCCCRICGIGKR-KFEEKTEHSVDDVLRICGQ-CEHNF------HVGCIEKS 445
P G W+C +C C+ C + K E T S+ R+C + C ++ H CI +
Sbjct: 683 PSGAWYCYNCSCKFCEKDEAAKHETSTLPSLSSC-RLCEEKCSKHYPHTLADHQACINQD 741
Query: 446 RAINLNNCSQNKWFCSDGCEVISSCLHEILDKPFQLGVDDLTWRLLKSMEVRDHHGPSNS 505
+ + + FC C+ + L + L + +W L+ E+
Sbjct: 742 GTVPGERSTDS--FCGKYCQELFEELQLFIGVKHPLP-EGFSWSFLRRFELPSEVADC-- 796
Query: 506 KEMEEALMENQSKLSVALDVMHECFEPIKDVLTERDLVEDVIFNRRSDLNRLNFQGFYTI 565
++ E + N +K++VA VM ECF P+ D + +L++++++N S+ +RL+F F T
Sbjct: 797 -DISEKIAYN-AKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTA 854
Query: 566 LLERNEEVISVRRMK 580
+LER +E+I+V ++
Sbjct: 855 VLERGDEIIAVASIR 869
Score = 59 (25.8 bits), Expect = 9.7e-46, Sum P(3) = 9.7e-46
Identities = 25/94 (26%), Positives = 38/94 (40%)
Query: 578 RMKHRRLGMCRVLMNELEKLLIELGVERLVLPAVPGVVDTWT----------------NK 621
R +RR GMCR LM+ +E + L + V ++D W +
Sbjct: 884 RYMYRRQGMCRRLMDGIESFVAYFSQMFLAISEV--LLDVWQFCCYPACFGDGPFCFFSG 941
Query: 622 FGFSKMTESERLQYSDYTFLDFQDTTMCQKLLRK 655
FGF+ + +SE+ + L F M K L K
Sbjct: 942 FGFAPVNDSEKKTIKNLNLLVFPGVDMLGKSLVK 975
Score = 52 (23.4 bits), Expect = 9.7e-46, Sum P(3) = 9.7e-46
Identities = 18/88 (20%), Positives = 35/88 (39%)
Query: 42 GWTIEYSSSKG-VFR---YTSPNGNPYLSLSQVCRELGDSVDDVPSEVSHDKVVNIPPQH 97
GWT+EY G ++ Y +P G + S+++ + ++ P++ +
Sbjct: 404 GWTVEYRPRNGRAYQDAVYLNPEGKTHWSVTKAYQVYKKQLESNPND-QKNSTTGSGFGL 462
Query: 98 CPEAVVFWYEHGLEKKNKSNRDMLLKAK 125
PE + E ++KK K K
Sbjct: 463 LPEEDLHLLERTIQKKRSDTGKQRSKLK 490
Score = 45 (20.9 bits), Expect = 5.2e-45, Sum P(3) = 5.2e-45
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 75 GDSVDDVPSEVSHDKVVNIPPQ 96
G SVD+V EV + V ++ P+
Sbjct: 93 GSSVDEVKEEVKQECVKSLVPE 114
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 202 (76.2 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 66/229 (28%), Positives = 91/229 (39%)
Query: 262 LIDNNGVLPEA-KVHYRGRNGPLAKGQIRRDGIKCDCCSKVFTLSGFEAHAGSQKHRPTA 320
L+ + G LPE ++ Y R L G GI C CC + S FEAHAG R
Sbjct: 526 LVFDRGGLPEGTELGYYARGQKLLGGYKMGAGIYCYCCKCEVSPSLFEAHAGWASRRKPY 585
Query: 321 NIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCP 380
I G L E +T H S ND +C IC GG L+LCD CP
Sbjct: 586 FYIYTSNGVSLHEW----------ATTFSHGRKYSANDNND-LCVICADGGNLLLCDSCP 634
Query: 381 SSFHKSCLVLNDLPKGNWFCPSCCCRICG--IGKRKFEEKTE---HSVDDVLRICGQCEH 435
+FH C+ L +P+GNW C C + G+ VD V ++ G+C
Sbjct: 635 RAFHIECVSLPSIPRGNWHCKYCENKFTSEIAGEYNVNSSAVGQLEGVDPVDQLAGRCIR 694
Query: 436 NFHVGCIEKSRAINLNNC--SQNKWFCSDGCEVISSCLHEILDKPFQLG 482
+ K+ N C FC G + + + +K + +G
Sbjct: 695 ------VVKNMEAETNGCVLCSGSDFCRSGFGPRTIIICDQCEKEYHIG 737
Score = 164 (62.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 39/154 (25%), Positives = 78/154 (50%)
Query: 429 ICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCEVISSCLHEILDKPFQLGVDDLTW 488
IC QCE +H+GC+ ++L + WFCS C I+S L ++L + + D +
Sbjct: 726 ICDQCEKEYHIGCLSSQNIVDLKELPKGNWFCSMDCTRINSTLQKLLLGGAEK-LSDSSL 784
Query: 489 RLLKSMEVRDHHGPSNSKEMEEALM-------ENQSKLSVALDVMHECFEPIKDVLTERD 541
++++ + R+ + ++ L+ E++ LS AL + H+CF+PI D L+ +
Sbjct: 785 GIIQTKQERNDVYSISDLDIRWRLISGKVTSPESRMLLSQALAIFHDCFDPIVDPLSGSN 844
Query: 542 LVEDVIFNRRSDLNRLNFQGFYTILLERNEEVIS 575
L+ +++ + + ++ G +L N V+S
Sbjct: 845 LIPRMVYGKT--MQGQDYGGICCAVLTVNATVVS 876
Score = 146 (56.5 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 47/155 (30%), Positives = 73/155 (47%)
Query: 514 ENQSKLSVALDVMHECFEPIKDVLTERDLVEDVIFNRR---SDLNRL-------NFQGFY 563
E++ LS AL + H+CF+PI D L+ +L+ +++ + D + N
Sbjct: 817 ESRMLLSQALAIFHDCFDPIVDPLSGSNLIPRMVYGKTMQGQDYGGICCAVLTVNATVVS 876
Query: 564 TILL-----ERNEEVISVRRMKHRRLGMCRVLMNELEKLLIELGVERLVLPAVPGVVDTW 618
LL E E + RM R G ++L + +EKLL L VE +V+PA W
Sbjct: 877 AGLLRVFGREVAELPLVATRMCSREKGYFQLLFSCIEKLLSSLNVESIVVPAAEEAEPLW 936
Query: 619 TNKFGFSKMTESERLQYSD--YTFLDFQDTTMCQK 651
NKFGF K+ + +Y Y + F+ +M QK
Sbjct: 937 MNKFGFRKLAPEQLSKYIKICYQMVRFKGASMLQK 971
Score = 110 (43.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 44/158 (27%), Positives = 72/158 (45%)
Query: 363 ICS---ICQYG-GE--LVLCDDCPSSFHKSCLV------LNDLPKGNWFCPSCCCRICGI 410
+CS C+ G G +++CD C +H CL L +LPKGNWFC C RI
Sbjct: 708 LCSGSDFCRSGFGPRTIIICDQCEKEYHIGCLSSQNIVDLKELPKGNWFCSMDCTRINST 767
Query: 411 GKRKFEEKTEHSVDDVLRICG-QCEHN--FHVGCIE-KSRAINLNNCS-QNKWFCSDGCE 465
++ E D L I + E N + + ++ + R I+ S +++ S
Sbjct: 768 LQKLLLGGAEKLSDSSLGIIQTKQERNDVYSISDLDIRWRLISGKVTSPESRMLLSQALA 827
Query: 466 VISSCLHEILDKPFQLGVDDLTWRLL--KSMEVRDHHG 501
+ C I+D P L +L R++ K+M+ +D+ G
Sbjct: 828 IFHDCFDPIVD-P--LSGSNLIPRMVYGKTMQGQDYGG 862
Score = 82 (33.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 32/88 (36%), Positives = 42/88 (47%)
Query: 254 KPRTILSWLIDNNGVLPEAKVHYRG----RNGPLAKGQIRRDGIKCDCCS----KVFTLS 305
+P T+ L + G+L V Y G + PL +G IR GI C C S V + S
Sbjct: 260 RPETVRD-LFET-GLLDGLSVVYMGTVKSQAFPL-RGIIRDGGILCSCSSCDWANVISTS 316
Query: 306 GFEAHAGSQKHRPTANIILNEGGKPLLE 333
FE HA Q +R + I E GK LL+
Sbjct: 317 KFEIHACKQ-YRRASQYICFENGKSLLD 343
Score = 38 (18.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 281 GPLAKGQIRRDGIKCDCCSKVFT 303
GP + G C CS+V T
Sbjct: 380 GPFPFSSLGHRGFLCKSCSEVET 402
>ZFIN|ZDB-GENE-030131-5913 [details] [associations]
symbol:trim24 "tripartite motif-containing 24"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5913 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AY598454
IPI:IPI00483547 UniGene:Dr.16482 ProteinModelPortal:Q6E2N2
SMR:Q6E2N2 HOVERGEN:HBG097569 ArrayExpress:Q6E2N2 Uniprot:Q6E2N2
Length = 961
Score = 150 (57.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 355 SDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+DE N++ C++CQ GGEL+ CD CP FH SC V L P G W+C C
Sbjct: 691 ADEDPNEDWCAVCQNGGELICCDKCPKVFHLSCHVPSLTASPSGEWYCTLC 741
Score = 58 (25.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 241 ARSPERFASPSNCKPRTILSWLIDNNGVLPE-AKVHYRGR 279
ARSP PSN P+T L LI+N P+ +V RGR
Sbjct: 497 ARSPPSMLQPSNLPPQT-LRGLINNPTYPPKPVEVLPRGR 535
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 159 (61.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQND--EICSICQYGGELVLCDDCPSSF 383
EG C+K+ + + + +E+++D E C +C+ GGEL+ CD CPSS+
Sbjct: 353 EGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSY 412
Query: 384 HKSCL--VLNDLPKGNWFCPSCCC 405
H CL L ++P G W CP C C
Sbjct: 413 HLHCLNPPLPEIPNGEWLCPRCTC 436
Score = 144 (55.7 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 31/94 (32%), Positives = 45/94 (47%)
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCR-ICGIGKR 413
E + + C +CQ GGE++LCD CP ++H CL L P+G W CP C I K
Sbjct: 313 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKD 372
Query: 414 KFEEKTE----HSVDDVLRICGQCEHNFHVGCIE 443
+E+ E DD + C C+ + C +
Sbjct: 373 DDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCD 406
Score = 39 (18.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 335 QKKILCKNRSSTRSQHDSITSDEKQNDEIC 364
+KK K++ +++ DE ND+ C
Sbjct: 72 KKKKKLKDKKEKKAKRKRKDDDEDDNDDGC 101
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 159 (61.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQND--EICSICQYGGELVLCDDCPSSF 383
EG C+K+ + + + +E+++D E C +C+ GGEL+ CD CPSS+
Sbjct: 379 EGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSY 438
Query: 384 HKSCL--VLNDLPKGNWFCPSCCC 405
H CL L ++P G W CP C C
Sbjct: 439 HLHCLNPPLPEIPNGEWLCPRCTC 462
Score = 148 (57.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 333 ECQKKILCKNRSSTRSQH-DSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--V 389
EC + K++ + + D E + + C +CQ GGE++LCD CP ++H CL
Sbjct: 314 ECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPE 373
Query: 390 LNDLPKGNWFCPSCCCR-ICGIGKRKFEEKTE----HSVDDVLRICGQCEHNFHVGCIE 443
L P+G W CP C I K +E+ E DD + C C+ + C +
Sbjct: 374 LEKAPEGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCD 432
>UNIPROTKB|Q5TH12 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0016301 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL049540
EMBL:AL031666 UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 EMBL:AL390212 IPI:IPI00872983 SMR:Q5TH12
STRING:Q5TH12 Ensembl:ENST00000435836 HOVERGEN:HBG105145
Uniprot:Q5TH12
Length = 175
Score = 130 (50.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 61 RNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 105
>UNIPROTKB|F1NX82 [details] [associations]
symbol:PHF21B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:AADN02006727 IPI:IPI00584515
Ensembl:ENSGALT00000022994 Uniprot:F1NX82
Length = 447
Score = 146 (56.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 38/108 (35%), Positives = 52/108 (48%)
Query: 304 LSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRS------STRSQHDSITSDE 357
L ++ +K R TAN + G LLE ++K L N STR+ D +E
Sbjct: 207 LEEIQSKRQERKRRSTANPAYS--G--LLETERKRLASNFLNNPLFLSTRANEDPFWKNE 262
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+DE C+ C+ G L C CP ++H +CL L PKG W CP C
Sbjct: 263 IHHDEYCTACKRGVNLQPCGTCPRAYHLNCLDPPLKTAPKGVWVCPKC 310
Score = 51 (23.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 57 TSPNGNPYLSLSQVCRELGDSVDDVPSEVSHD-KVVNIPPQ 96
TSP+ +S S + DS+ P +S D KV+ I PQ
Sbjct: 117 TSPSNAAPISTSATVSVVNDSIKVQPLLISADSKVIIIQPQ 157
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 151 (58.2 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+ ND+ C++C+ GGEL+ CD CP +FH SCLV L +P+G W C C
Sbjct: 291 EHNDDECAVCKDGGELICCDGCPRAFHLSCLVPPLTSIPRGTWRCQLC 338
Score = 46 (21.3 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCEVISSC 470
C QC +H C + NCS++ W G + S+C
Sbjct: 418 CPQCLQAYHALCNFPNGRTRCRNCSRS-W--GPGNDNSSTC 455
Score = 41 (19.5 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 44 TIEYSSSKGVFRYTSPNGNPYLSL---SQVCRELGDSVDDVPSEVSH 87
T+ + KG+ + NGNP L L SQ ++ G S + H
Sbjct: 100 TVFMNLPKGLKQEVRQNGNPKLELQARSQSGKKRGVSEKQLTHRTHH 146
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 144 (55.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+N++ C++C+ GGEL+ CD CP +FH +CL L ++P G W C SC
Sbjct: 87 KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>MGI|MGI:2137357 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0017015 "regulation
of transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
UniPathway:UPA00143 MGI:MGI:2137357 Prosite:PS00518 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070412 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 eggNOG:COG5076 GO:GO:0030514
GO:GO:0017015 GO:GO:0070410 HOGENOM:HOG000252971 HOVERGEN:HBG054599
CTD:51592 KO:K08883 OrthoDB:EOG4SN1N0 EMBL:AY458590 EMBL:AK129293
EMBL:AF220138 IPI:IPI00409904 IPI:IPI00480381 RefSeq:NP_001073299.1
RefSeq:NP_444400.2 UniGene:Mm.195036 ProteinModelPortal:Q99PP7
SMR:Q99PP7 DIP:DIP-59674N IntAct:Q99PP7 STRING:Q99PP7
PhosphoSite:Q99PP7 PaxDb:Q99PP7 PRIDE:Q99PP7 GeneID:94093
KEGG:mmu:94093 UCSC:uc008qsv.1 UCSC:uc008qsw.1 InParanoid:Q99PP7
NextBio:352085 Bgee:Q99PP7 CleanEx:MM_TRIM33 Genevestigator:Q99PP7
GermOnline:ENSMUSG00000033014 Uniprot:Q99PP7
Length = 1142
Score = 155 (59.6 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 43/131 (32%), Positives = 63/131 (48%)
Query: 299 SKVFTLSGFEAHAGSQKHRPT--ANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSD 356
S++ TL+G E H K PT + G L+ + I S R D + D
Sbjct: 841 SELDTLTGLENHV---KTEPTDISESCKQSGLSNLVNGKSPIRNLMHRSARIGGDGNSKD 897
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRK 414
+ N++ C++CQ GG+L+ C+ CP FH +C V L P G+W C C R IGK +
Sbjct: 898 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC--R--DIGKPE 953
Query: 415 FE---EKTEHS 422
E + +HS
Sbjct: 954 VEYDCDNMQHS 964
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 152 (58.6 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 354 TSDEKQ---NDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
T+ +KQ ++E C +C GG+L+ CD CPS +H++CL L +PKG+W CP C
Sbjct: 25 TNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 148 (57.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 357 EKQND--EICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRI 407
E+++D E C +C+ GGEL+ CD C SS+H CL L D+P G W CP C C +
Sbjct: 321 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPV 375
Score = 144 (55.7 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 351 DSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+ + E + + C +CQ GGE++LCD CP ++H CL L+ P+G W CP C
Sbjct: 240 EEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 294
Score = 49 (22.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L + +W C C V+ + +IL
Sbjct: 339 LLCCDACISSYHIHCLNPP----LPDIPNGEWLCPRCTCPVLKGRVQKIL 384
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 148 (57.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 328 GKPLLECQKKIL-CKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKS 386
G+P + +KK+L C T + + + E + + C +CQ GGE++LCD CP ++H
Sbjct: 364 GRPGRK-KKKVLGCP----TVTGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLV 418
Query: 387 CL--VLNDLPKGNWFCPSC 403
CL L+ P+G W CP C
Sbjct: 419 CLDPELDRAPEGKWSCPHC 437
Score = 148 (57.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 357 EKQND--EICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRI 407
E+++D E C +C+ GGEL+ CD C SS+H CL L D+P G W CP C C +
Sbjct: 463 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPV 517
Score = 49 (22.3 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L + +W C C V+ + +IL
Sbjct: 481 LLCCDACISSYHIHCLNPP----LPDIPNGEWLCPRCTCPVLKGRVQKIL 526
>ZFIN|ZDB-GENE-121031-4 [details] [associations]
symbol:chd3 "chromodomain helicase DNA binding
protein 3" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-121031-4
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016818 EMBL:BC127572
EMBL:BC127574 IPI:IPI00488488 UniGene:Dr.66871 eggNOG:NOG299768
InParanoid:A0PJQ7 OMA:DSTHEET Uniprot:A0PJQ7
Length = 430
Score = 146 (56.5 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 310 HAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQY 369
H+ S + + + N+ G+P KK K ++ D +D + + C +CQ
Sbjct: 342 HSSSVRSDSSGRVKKNKRGRPA----KK---KKKALGDEDGDGYETDHQ---DYCEVCQQ 391
Query: 370 GGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
GGE++LCD CP ++H CL L P+G W CP C
Sbjct: 392 GGEIILCDTCPRAYHLVCLEPELEKAPEGKWSCPHC 427
>UNIPROTKB|C9JL37 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 HGNC:HGNC:360
HOGENOM:HOG000060093 IPI:IPI00480202 ProteinModelPortal:C9JL37
SMR:C9JL37 STRING:C9JL37 Ensembl:ENST00000355347
ArrayExpress:C9JL37 Bgee:C9JL37 Uniprot:C9JL37
Length = 338
Score = 144 (55.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+N++ C++C+ GGEL+ CD CP +FH +CL L ++P G W C SC
Sbjct: 87 KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>UNIPROTKB|I3LF49 [details] [associations]
symbol:I3LF49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000030965
Uniprot:I3LF49
Length = 591
Score = 148 (57.2 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 41/131 (31%), Positives = 61/131 (46%)
Query: 299 SKVFTLSGFEAHAGSQKHRPT-ANIILNEGG-KPLLECQKKILCKNRSSTRSQHDSITSD 356
S++ L+ E H K PT N + G L+ + + S R D D
Sbjct: 307 SELDALASLENHV---KTEPTDMNESCKQSGLSSLVNGKSPVRSLMHRSARIGGDGSNKD 363
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRK 414
+ N++ C++CQ GG+L+ C+ CP FH +C V L P G+W C C R IGK +
Sbjct: 364 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC--R--DIGKPE 419
Query: 415 FE---EKTEHS 422
E + +HS
Sbjct: 420 VEYDCDNLQHS 430
>UNIPROTKB|F1SJU8 [details] [associations]
symbol:PHF21B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:CU633627
Ensembl:ENSSSCT00000000021 Uniprot:F1SJU8
Length = 450
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/108 (35%), Positives = 51/108 (47%)
Query: 304 LSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSST------RSQHDSITSDE 357
L ++ +K R TAN + G LLE ++K L N +T R+ D E
Sbjct: 212 LEEIQSKRQERKRRSTANPAYS--G--LLETERKRLASNFLNTPLFLTARANEDPCWKSE 267
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+DE C+ C+ G L C CP ++H SCL L PKG W CP C
Sbjct: 268 IAHDEHCATCKRGANLQPCGTCPGAYHLSCLDPPLKTAPKGVWVCPKC 315
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 122 (48.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S + + + S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 38 KRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 97
Query: 399 FCPSCCCR 406
C C R
Sbjct: 98 MCHRCTVR 105
>MGI|MGI:1276545 [details] [associations]
symbol:Nsd1 "nuclear receptor-binding SET-domain protein 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IMP]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=ISO;IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0010452 "histone H3-K36
methylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IPI]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IPI]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IC] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=IDA]
[GO:0042974 "retinoic acid receptor binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IPI] [GO:0046966
"thyroid hormone receptor binding" evidence=IPI] [GO:0046975
"histone methyltransferase activity (H3-K36 specific)"
evidence=ISO;IDA] [GO:0050681 "androgen receptor binding"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
EMBL:AF064553 MGI:MGI:1276545 Pfam:PF00855 GO:GO:0003714
GO:GO:0005694 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0000122 UniGene:Mm.12964
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0050681 eggNOG:COG2940 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 GO:GO:0046975 GO:GO:0035097
HOGENOM:HOG000113857 HOVERGEN:HBG007518 OrthoDB:EOG49GKFN
ChiTaRS:NSD1 EMBL:AK082820 EMBL:AK004485 IPI:IPI00131111 PIR:T14342
UniGene:Mm.168965 ProteinModelPortal:O88491 SMR:O88491
STRING:O88491 PhosphoSite:O88491 PaxDb:O88491 PRIDE:O88491
UCSC:uc007qqd.1 CleanEx:MM_NSD1 Genevestigator:O88491
GermOnline:ENSMUSG00000021488 Uniprot:O88491
Length = 2588
Score = 156 (60.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 320 ANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDC 379
AN G +L I+C N + R + E N C +C GG L+ CD C
Sbjct: 1568 ANDFCLAAGSKIL-ASNSIICPNHFTPRR---GCRNHEHVNVSWCFVCSEGGSLLCCDSC 1623
Query: 380 PSSFHKSCLVLNDLPKGNWFCPSC 403
P++FH+ CL + D+P+GNW+C C
Sbjct: 1624 PAAFHRECLNI-DIPEGNWYCNDC 1646
Score = 51 (23.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 9 PKFCPEVIRKYLSIKGTQHPALIVNVRRHLKHLGWTI--EYSSSKGVF-RYTSPNGNPYL 65
P P + L I GT P+ + L + I ++ +S G+ +Y P G+
Sbjct: 283 PDSSPSPLGNMLEIPGTSSPS----TSQELPFVPQKILSKWEASVGLAEQYDVPKGSKNQ 338
Query: 66 SLSQVCRELGDSVDDVPSE-VSHDK-VVNIPPQHCPEAVVFWYEHGLEKKNK 115
+L DS +D+P E ++D ++ C +++ F EH ++K K
Sbjct: 339 KCVSSSVKL-DSEEDMPFEDCTNDPDSEHLLLNGCLKSLAFDSEHSADEKEK 389
>UNIPROTKB|F1N7W5 [details] [associations]
symbol:LOC788840 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:DAAA02014921 IPI:IPI00842008
Ensembl:ENSBTAT00000042589 Uniprot:F1N7W5
Length = 501
Score = 149 (57.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 38/108 (35%), Positives = 53/108 (49%)
Query: 304 LSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSST------RSQHDSITSDE 357
L ++ +K R TAN + G LLE ++K L N +T R+ D +E
Sbjct: 263 LEEIQSKRQERKRRSTANPAYS--G--LLETERKRLASNYLNTPLFLTARANEDPCWKNE 318
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+DE+C+ C+ G L C CP ++H SCL L PKG W CP C
Sbjct: 319 ITHDELCAACKRGTNLQPCGTCPRAYHLSCLDPPLKTAPKGVWVCPKC 366
Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 57 TSPNGNPYLSLSQVCRELGDSVDDVPSEVSHDKVVNIPPQHC 98
T+P+ ++ S + DSV P +S D + + P C
Sbjct: 116 TAPSNAAAMAPSTAVSMVSDSVKVQPLLISADNKLPLTPPPC 157
>UNIPROTKB|F1MNE1 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410
"co-SMAD binding" evidence=IEA] [GO:0030514 "negative regulation of
BMP signaling pathway" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 OMA:PIRSLMH
EMBL:DAAA02007465 EMBL:DAAA02007466 EMBL:DAAA02007467
IPI:IPI00717094 RefSeq:NP_001192947.1 UniGene:Bt.91873
ProteinModelPortal:F1MNE1 PRIDE:F1MNE1 Ensembl:ENSBTAT00000001967
GeneID:533296 KEGG:bta:533296 NextBio:20875989 Uniprot:F1MNE1
Length = 1126
Score = 149 (57.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/131 (31%), Positives = 62/131 (47%)
Query: 299 SKVFTLSGFEAHAGSQKHRPT-ANIILNEGG-KPLLECQKKILCKNRSSTRSQHDSITSD 356
S++ TL+ E H K P N + G L+ + + S R D + D
Sbjct: 825 SELDTLTSLENHV---KTEPADMNESCKQSGLNSLVNGKSPVRSLMHRSARIGGDGSSKD 881
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRK 414
+ N++ C++CQ GG+L+ C+ CP FH +C V L P G+W C C R IGK +
Sbjct: 882 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC--R--DIGKPE 937
Query: 415 FE---EKTEHS 422
E + +HS
Sbjct: 938 VEYDCDNLQHS 948
>UNIPROTKB|O43918 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006955 "immune
response" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0006955 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
EMBL:CH471079 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB006682 EMBL:AB006683 EMBL:AB006684
EMBL:AB006685 EMBL:Z97990 EMBL:AJ009610 EMBL:AP001754 EMBL:AP001060
EMBL:BC137268 EMBL:BC137270 IPI:IPI00015149 IPI:IPI00031178
IPI:IPI00031188 RefSeq:NP_000374.1 UniGene:Hs.129829 PDB:1XWH
PDB:2KE1 PDB:2KFT PDB:2LRI PDBsum:1XWH PDBsum:2KE1 PDBsum:2KFT
PDBsum:2LRI ProteinModelPortal:O43918 SMR:O43918 DIP:DIP-47504N
IntAct:O43918 MINT:MINT-6542056 STRING:O43918 PhosphoSite:O43918
PRIDE:O43918 Ensembl:ENST00000291582 Ensembl:ENST00000337909
Ensembl:ENST00000397994 Ensembl:ENST00000468282 GeneID:326
KEGG:hsa:326 UCSC:uc002zei.2 CTD:326 GeneCards:GC21P045705
HGNC:HGNC:360 HPA:HPA038267 MIM:109100 MIM:240300 MIM:607358
neXtProt:NX_O43918 Orphanet:3453 PharmGKB:PA24654 eggNOG:NOG317492
HOGENOM:HOG000060093 HOVERGEN:HBG014961 InParanoid:O43918 KO:K10603
OMA:NDDECAV OrthoDB:EOG4VX25M PhylomeDB:O43918
EvolutionaryTrace:O43918 GenomeRNAi:326 NextBio:1337
ArrayExpress:O43918 Bgee:O43918 CleanEx:HS_AIRE
Genevestigator:O43918 GermOnline:ENSG00000160224 GO:GO:0042393
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Uniprot:O43918
Length = 545
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
++N++ C++C+ GGEL+ CD CP +FH +CL L ++P G W C SC
Sbjct: 293 QKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
>UNIPROTKB|I3LBT0 [details] [associations]
symbol:I3LBT0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000029002
Uniprot:I3LBT0
Length = 945
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 41/131 (31%), Positives = 61/131 (46%)
Query: 299 SKVFTLSGFEAHAGSQKHRPT-ANIILNEGG-KPLLECQKKILCKNRSSTRSQHDSITSD 356
S++ L+ E H K PT N + G L+ + + S R D D
Sbjct: 644 SELDALASLENHV---KTEPTDMNESCKQSGLSSLVNGKSPVRSLMHRSARIGGDGSNKD 700
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRK 414
+ N++ C++CQ GG+L+ C+ CP FH +C V L P G+W C C R IGK +
Sbjct: 701 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC--R--DIGKPE 756
Query: 415 FE---EKTEHS 422
E + +HS
Sbjct: 757 VEYDCDNLQHS 767
>UNIPROTKB|I3LD78 [details] [associations]
symbol:I3LD78 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000022292 OMA:HCLELED
Uniprot:I3LD78
Length = 948
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 41/131 (31%), Positives = 61/131 (46%)
Query: 299 SKVFTLSGFEAHAGSQKHRPT-ANIILNEGG-KPLLECQKKILCKNRSSTRSQHDSITSD 356
S++ L+ E H K PT N + G L+ + + S R D D
Sbjct: 647 SELDALASLENHV---KTEPTDMNESCKQSGLSSLVNGKSPVRSLMHRSARIGGDGSNKD 703
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRK 414
+ N++ C++CQ GG+L+ C+ CP FH +C V L P G+W C C R IGK +
Sbjct: 704 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC--R--DIGKPE 759
Query: 415 FE---EKTEHS 422
E + +HS
Sbjct: 760 VEYDCDNLQHS 770
>UNIPROTKB|B1AHC5 [details] [associations]
symbol:PHF21B "cDNA FLJ34161 fis, clone FCBBF3014229,
highly similar to PHD finger protein 21B" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:CH471138
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 HOVERGEN:HBG080293 HOGENOM:HOG000231466
EMBL:AL049760 EMBL:Z83838 RefSeq:NP_001229379.1 UniGene:Hs.254097
DNASU:112885 GeneID:112885 KEGG:hsa:112885 CTD:112885
HGNC:HGNC:25161 ChiTaRS:PHF21B GenomeRNAi:112885 NextBio:78697
EMBL:AL079301 EMBL:AK091480 IPI:IPI00893566 SMR:B1AHC5
Ensembl:ENST00000403565 UCSC:uc003bfm.3 Uniprot:B1AHC5
Length = 327
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/108 (34%), Positives = 51/108 (47%)
Query: 304 LSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSST------RSQHDSITSDE 357
L ++ +K R TAN + G LLE ++K L N + R+ D +E
Sbjct: 89 LEEIQSKRQERKRRSTANPAYS--G--LLETERKRLASNYLNNPLFLTARANEDPCWKNE 144
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+DE C+ C+ G L C CP ++H SCL L PKG W CP C
Sbjct: 145 ITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRC 192
>UNIPROTKB|F1PLN6 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514
GO:GO:0017015 GeneTree:ENSGT00530000062982 OMA:PIRSLMH
EMBL:AAEX03010993 Ensembl:ENSCAFT00000015037 Uniprot:F1PLN6
Length = 995
Score = 148 (57.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 39/129 (30%), Positives = 61/129 (47%)
Query: 299 SKVFTLSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEK 358
S++ L+ E H ++ T G L+ + I S+R D + D+
Sbjct: 694 SELDALASLENHVKTEP-ADTNESCKQSGLSSLVNGKSPIRSLVHRSSRIGGDGSSKDDD 752
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFE 416
N++ C++CQ GG+L+ C+ CP FH +C V L P G+W C C R IGK + E
Sbjct: 753 PNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC--R--DIGKPEVE 808
Query: 417 ---EKTEHS 422
+ +HS
Sbjct: 809 YDCDNLQHS 817
>DICTYBASE|DDB_G0277341 [details] [associations]
symbol:DDB_G0277341 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 dictyBase:DDB_G0277341 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AAFI02000019 eggNOG:NOG145066
RefSeq:XP_642746.2 ProteinModelPortal:Q86K47 SMR:Q86K47
EnsemblProtists:DDB0219998 GeneID:8620936 KEGG:ddi:DDB_G0277341
InParanoid:Q86K47 OMA:ASMPSEF Uniprot:Q86K47
Length = 914
Score = 150 (57.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 360 NDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRICGIGKRKFEE 417
ND+ CS C GG+L+ CD+C +SFH CL LN++P G+WFC SC + K++ ++
Sbjct: 60 NDDYCSGCGDGGDLLCCDNCQASFHLICLNPPLNEIPSGDWFCDSCTYK-----KQQQQQ 114
Query: 418 KTE 420
KT+
Sbjct: 115 KTK 117
Score = 45 (20.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 418 KTEHSVDDVLRICGQCEHNFHVGCIE 443
K + D+++ C +C FH C+E
Sbjct: 201 KDSSNQTDIVQ-CNRCNSCFHTFCLE 225
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 24/84 (28%), Positives = 40/84 (47%)
Query: 498 DHHGPSNSKEME--EALMENQSKLSVALDVMHECFEPIK-DVLTER-DLVEDVIFNRRSD 553
+++ +N + M E L+E Q KLSVA M F I DVL + D ++ + S
Sbjct: 723 NNNNNNNEQAMSQLEILLEEQRKLSVAS--MPSEFGIIPTDVLQQPIDSCNSIVMSSLSP 780
Query: 554 LNRLNFQGFYTILLERNEEVISVR 577
L F + L++ N ++ +R
Sbjct: 781 LFT-QFLAWQR-LMQINHQIFQLR 802
Score = 43 (20.2 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 18/73 (24%), Positives = 31/73 (42%)
Query: 472 HEILDKPFQLGVDDLTWRLLKSMEVRDHHGPSNSKEMEEALMENQSKLSVALDVMHECFE 531
++I D L VD L+ R S ++ + SN+ + ++N K S C
Sbjct: 144 NDIQDTMINL-VDSLSSRNPTSFQLPREYTKSNNNNINNKFIKNIIKTSSKKKGCQSC-- 200
Query: 532 PIKDVLTERDLVE 544
KD + D+V+
Sbjct: 201 --KDSSNQTDIVQ 211
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 154 (59.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 29/81 (35%), Positives = 43/81 (53%)
Query: 326 EGGKPLLECQKK-ILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFH 384
EG C+K+ I + + + + +E + E C +C+ GGEL+ CD CPSS+H
Sbjct: 309 EGKWSCPHCEKEGIQWEPKEEEDEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYH 368
Query: 385 KSCL--VLNDLPKGNWFCPSC 403
CL L ++P G W CP C
Sbjct: 369 LHCLNPPLPEIPNGEWLCPRC 389
Score = 150 (57.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 31/93 (33%), Positives = 46/93 (49%)
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCR-ICGIGKR 413
E + + C +CQ GGE++LCD CP ++H CL L P+G W CP C I K
Sbjct: 269 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKE 328
Query: 414 KFEEKTE---HSVDDVLRICGQCEHNFHVGCIE 443
+ +E+ E DD + C C+ + C +
Sbjct: 329 EEDEEEEGGEEEEDDHMEFCRVCKDGGELLCCD 361
Score = 48 (22.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVR---DHHGPSNS-KEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R +++ S +E ++ L +NQS+ S+ + E
Sbjct: 1221 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDE 1280
Query: 529 CFE 531
FE
Sbjct: 1281 DFE 1283
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 159 (61.0 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQND--EICSICQYGGELVLCDDCPSSF 383
EG C+K+ + + + +E+++D E C +C+ GGEL+ CD CPSS+
Sbjct: 295 EGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSY 354
Query: 384 HKSCL--VLNDLPKGNWFCPSCCC 405
H CL L ++P G W CP C C
Sbjct: 355 HLHCLNPPLPEIPNGEWLCPRCTC 378
Score = 148 (57.2 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 333 ECQKKILCKNRSSTRSQH-DSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--V 389
EC + K++ + + D E + + C +CQ GGE++LCD CP ++H CL
Sbjct: 230 ECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPE 289
Query: 390 LNDLPKGNWFCPSCCCR-ICGIGKRKFEEKTE----HSVDDVLRICGQCEHNFHVGCIE 443
L P+G W CP C I K +E+ E DD + C C+ + C +
Sbjct: 290 LEKAPEGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCD 348
Score = 48 (22.0 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVR---DHHGPSNS-KEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R +++ S +E ++ L +NQS+ S+ + E
Sbjct: 1201 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDE 1260
Query: 529 CFE 531
FE
Sbjct: 1261 DFE 1263
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 650 QKLLRKVPLSALESLLPWKQR 670
QK L P+ L+ +LP K++
Sbjct: 1512 QKTLLMAPVGLLKEVLPEKEK 1532
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 158 (60.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSD-----EKQND---EICSICQYGGELVLCD 377
EG C+K+ + S+ + I D E+++D E C +C+ GGEL+ CD
Sbjct: 376 EGKWSCPHCEKEGIQWEAKEDNSEGEEILEDVVGDAEEEDDHHMEFCRVCKDGGELLCCD 435
Query: 378 DCPSSFHKSCL--VLNDLPKGNWFCPSCCC 405
CPSS+H CL L ++P G W CP C C
Sbjct: 436 ACPSSYHIHCLNPPLPEIPNGEWLCPRCTC 465
Score = 148 (57.2 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 324 LNEGGKPLLECQKKILCKNRSSTRSQHDS-ITSD--EKQNDEICSICQYGGELVLCDDCP 380
+++G +K L + + + DS + D E + + C +CQ GGE++LCD CP
Sbjct: 300 VSDGSTSRSSRSRKKLKAGKKKKKGEEDSTVAVDGYETDHQDYCEVCQQGGEIILCDTCP 359
Query: 381 SSFHKSCLV--LNDLPKGNWFCPSC 403
++H CL + P+G W CP C
Sbjct: 360 RAYHMVCLDPDMEKAPEGKWSCPHC 384
Score = 46 (21.3 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L +W C C + + +IL
Sbjct: 431 LLCCDACPSSYHIHCLNPP----LPEIPNGEWLCPRCTCPALKGKVQKIL 476
Score = 44 (20.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVRD----HHGPSNSKEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R + G ++ ++ +NQS SVA + E
Sbjct: 1285 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDE 1344
Query: 529 CFE 531
F+
Sbjct: 1345 DFD 1347
>UNIPROTKB|F1PPM4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:AAEX03016632 Ensembl:ENSCAFT00000017065 Uniprot:F1PPM4
Length = 547
Score = 152 (58.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+++N++ C++C+ GGEL+ CD CP +FH +CL L+D+P G W C SC
Sbjct: 292 QQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLHDIPSGTWRCSSC 340
Score = 37 (18.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 243 SPERFASPSNCKPRTILSWL 262
+P +F PS K RT S L
Sbjct: 232 TPSKFEDPSGGKNRTRSSGL 251
>TAIR|locus:2169779 [details] [associations]
symbol:ATXR6 "AT5G24330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=IEP] [GO:0046976 "histone
methyltransferase activity (H3-K27 specific)" evidence=IDA]
[GO:0070734 "histone H3-K27 methylation" evidence=IDA] [GO:0006275
"regulation of DNA replication" evidence=IGI;RCA] [GO:0000280
"nuclear division" evidence=RCA] [GO:0000911 "cytokinesis by cell
plate formation" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
SMART:SM00249 SMART:SM00317 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006275 GO:GO:0046872 EMBL:AB016884
GO:GO:0008270 EMBL:AB006701 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0009901
InterPro:IPR019786 PROSITE:PS01359 EMBL:BT012223 EMBL:BT012421
IPI:IPI00543408 RefSeq:NP_197821.1 UniGene:At.30965
ProteinModelPortal:Q9FNE9 SMR:Q9FNE9 DIP:DIP-48530N STRING:Q9FNE9
PRIDE:Q9FNE9 EnsemblPlants:AT5G24330.1 GeneID:832503
KEGG:ath:AT5G24330 TAIR:At5g24330 eggNOG:NOG305320
HOGENOM:HOG000238747 InParanoid:Q9FNE9 OMA:VICPDRR PhylomeDB:Q9FNE9
ProtClustDB:CLSN2686326 Genevestigator:Q9FNE9 GermOnline:AT5G24330
GO:GO:0046976 Uniprot:Q9FNE9
Length = 349
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 28/74 (37%), Positives = 38/74 (51%)
Query: 335 QKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYG---GELVLCDDCPSSFHKSCL--V 389
+++ N S QH S + D +C C G +L+LCD C FH CL +
Sbjct: 6 RRRTQASNPRSEPPQHMSDHDSDSDWDTVCEECSSGKQPAKLLLCDKCDKGFHLFCLRPI 65
Query: 390 LNDLPKGNWFCPSC 403
L +PKG+WFCPSC
Sbjct: 66 LVSVPKGSWFCPSC 79
>RGD|1307339 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017015 "regulation of transforming growth factor
beta receptor signaling pathway" evidence=ISO] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1307339
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 IPI:IPI00957392
Ensembl:ENSRNOT00000025600 UCSC:RGD:1307339 NextBio:688291
ArrayExpress:D3ZUM5 Uniprot:D3ZUM5
Length = 1127
Score = 147 (56.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 39/129 (30%), Positives = 61/129 (47%)
Query: 299 SKVFTLSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEK 358
S++ TL+ E H ++ + G L+ + I S R D + D+
Sbjct: 843 SELDTLTSLENHVKTEP-ADISESCKQSGLSSLVNGKSPIRNLMHRSARIGGDGNSKDDD 901
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFE 416
N++ C++CQ GG+L+ C+ CP FH +C V L P G+W C C R IGK + E
Sbjct: 902 PNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC--R--DIGKPEVE 957
Query: 417 ---EKTEHS 422
+ +HS
Sbjct: 958 YDCDNMQHS 966
>MGI|MGI:2142581 [details] [associations]
symbol:Whsc1l1 "Wolf-Hirschhorn syndrome candidate 1-like 1
(human)" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016571 "histone methylation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=ISO] [GO:0032259 "methylation" evidence=IEA] [GO:0034968
"histone lysine methylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00249
SMART:SM00317 SMART:SM00570 MGI:MGI:2142581 Pfam:PF00855
GO:GO:0005634 GO:GO:0005694 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:COG2940 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AC156990
HOGENOM:HOG000230893 HOVERGEN:HBG079979 CTD:54904 KO:K11425
ChiTaRS:WHSC1L1 EMBL:AK079952 EMBL:AK132725 EMBL:AK156746
EMBL:AK170040 EMBL:AC162367 EMBL:BC064447 IPI:IPI00353681
IPI:IPI00625887 IPI:IPI00974621 IPI:IPI00987793
RefSeq:NP_001001735.1 UniGene:Mm.217337 ProteinModelPortal:Q6P2L6
SMR:Q6P2L6 STRING:Q6P2L6 PhosphoSite:Q6P2L6 PaxDb:Q6P2L6
PRIDE:Q6P2L6 DNASU:234135 Ensembl:ENSMUST00000146919
Ensembl:ENSMUST00000155861 GeneID:234135 KEGG:mmu:234135
UCSC:uc009lgk.1 UCSC:uc009lgm.1 UCSC:uc009lgp.1 InParanoid:Q6P2L6
NextBio:382034 Bgee:Q6P2L6 Genevestigator:Q6P2L6
GermOnline:ENSMUSG00000054823 Uniprot:Q6P2L6
Length = 1439
Score = 148 (57.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 327 GGKPLLECQKKILCKNRSSTRSQHDSITSDEKQ-NDEICSICQYGGELVLCD--DCPSSF 383
G +P C + K +++ + + ++ K +++ C C GGELV+CD DCP ++
Sbjct: 1288 GVRPKSACTSAVDEKTKNAKLKKRRKVKAEAKPIHEDYCFQCGDGGELVMCDKKDCPKAY 1347
Query: 384 HKSCLVLNDLPKGNWFCPSCCCRICGIGKRKFEEKTEHS 422
H CL L P G W CP C CG F E HS
Sbjct: 1348 HLLCLNLTQPPHGKWECPWHRCDECGSVAVSFCEFCPHS 1386
>RGD|1306330 [details] [associations]
symbol:Ing1 "inhibitor of growth family, member 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006606 "protein import into nucleus"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010941 "regulation of cell death" evidence=ISO] [GO:0035064
"methylated histone residue binding" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1306330 GO:GO:0005634 GO:GO:0045893 GO:GO:0010941
GO:GO:0046872 GO:GO:0008270 GO:GO:0006606 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:BC086336 IPI:IPI00365368
UniGene:Rn.145491 UniGene:Rn.232052 ProteinModelPortal:Q5RK29
STRING:Q5RK29 UCSC:RGD:1306330 InParanoid:Q5RK29
ArrayExpress:Q5RK29 Genevestigator:Q5RK29 Uniprot:Q5RK29
Length = 102
Score = 119 (46.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 341 KNRSSTRSQHDSITSDEK--QNDEICSIC-QYG-GELVLCD--DCPSS-FHKSCLVLNDL 393
K RS +++ ++ +D N+ +C Q GE++ CD +CP FH SC+ LN
Sbjct: 10 KKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHK 69
Query: 394 PKGNWFCPSC 403
PKG W+CP C
Sbjct: 70 PKGKWYCPKC 79
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 159 (61.0 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQND--EICSICQYGGELVLCDDCPSSF 383
EG C+K+ + + + +E+++D E C +C+ GGEL+ CD CPSS+
Sbjct: 311 EGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSY 370
Query: 384 HKSCL--VLNDLPKGNWFCPSCCC 405
H CL L ++P G W CP C C
Sbjct: 371 HLHCLNPPLPEIPNGEWLCPRCTC 394
Score = 148 (57.2 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 333 ECQKKILCKNRSSTRSQH-DSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--V 389
EC + K++ + + D E + + C +CQ GGE++LCD CP ++H CL
Sbjct: 246 ECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPE 305
Query: 390 LNDLPKGNWFCPSCCCR-ICGIGKRKFEEKTE----HSVDDVLRICGQCEHNFHVGCIE 443
L P+G W CP C I K +E+ E DD + C C+ + C +
Sbjct: 306 LEKAPEGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCD 364
Score = 48 (22.0 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVR---DHHGPSNS-KEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R +++ S +E ++ L +NQS+ S+ + E
Sbjct: 1254 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDE 1313
Query: 529 CFE 531
FE
Sbjct: 1314 DFE 1316
Score = 39 (18.8 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 607 VLPAVPGVVDTWTNKFGFSKMTESE 631
+LPA PG+ D + G+ M E E
Sbjct: 1490 LLPAPPGLPDKLEAQLGY--MDEKE 1512
>RGD|1311139 [details] [associations]
symbol:Aire "autoimmune regulator" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006959 "humoral immune response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0015629 "actin
cytoskeleton" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 RGD:1311139
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 GO:GO:0045182 GO:GO:0044212 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV OrthoDB:EOG4VX25M
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 IPI:IPI00360526
Ensembl:ENSRNOT00000001611 UCSC:RGD:1311139 Uniprot:D3ZV49
Length = 551
Score = 142 (55.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCC 404
++N++ C++C GGEL+ CD CP +FH +CL L ++P G W C SCC
Sbjct: 295 QKNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRC-SCC 342
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 155 (59.6 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSD-----EKQND---EICSICQYGGELVLCD 377
EG C+K+ + S+ + I + E+++D E C +C+ GGEL+ CD
Sbjct: 427 EGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCD 486
Query: 378 DCPSSFHKSCL--VLNDLPKGNWFCPSCCC 405
CPSS+H CL L ++P G W CP C C
Sbjct: 487 TCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 516
Score = 147 (56.8 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 335 QKKI-LCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LN 391
+KK+ K + + ++ E + + C +CQ GGE++LCD CP ++H CL +
Sbjct: 364 RKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDME 423
Query: 392 DLPKGNWFCPSC 403
P+G W CP C
Sbjct: 424 KAPEGKWSCPHC 435
Score = 48 (22.0 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 70 VCRELGDSVDDVPSEVSHDK 89
+CR+LGDS + P V D+
Sbjct: 99 LCRQLGDSSGEGPEFVEEDE 118
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L +W C C + + +IL
Sbjct: 482 LLCCDTCPSSYHIHCLNPP----LPEIPNGEWLCPRCTCPALKGKVQKIL 527
Score = 44 (20.5 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVRD----HHGPSNSKEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R + G ++ ++ +NQS SVA + E
Sbjct: 1337 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDE 1396
Query: 529 CFE 531
F+
Sbjct: 1397 DFD 1399
>MGI|MGI:1338803 [details] [associations]
symbol:Aire "autoimmune regulator (autoimmune
polyendocrinopathy candidiasis ectodermal dystrophy)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00184 SMART:SM00249 SMART:SM00258
MGI:MGI:1338803 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 CTD:326 eggNOG:NOG317492 HOVERGEN:HBG014961
KO:K10603 OMA:NDDECAV GO:GO:0042393 GO:GO:0006959
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763 EMBL:AF105002
EMBL:AF128772 EMBL:AF128773 EMBL:AJ007715 EMBL:AF079536
EMBL:AJ132243 EMBL:AF128115 EMBL:AF128116 EMBL:AF128117
EMBL:AF128118 EMBL:AF128119 EMBL:AF128120 EMBL:AF128121
EMBL:AF128122 EMBL:AF128123 EMBL:AF128124 EMBL:AF128125
EMBL:AJ243821 IPI:IPI00129025 IPI:IPI00223523 IPI:IPI00223524
IPI:IPI00223525 IPI:IPI00230215 IPI:IPI00230216 IPI:IPI00230217
IPI:IPI00230218 IPI:IPI00230219 IPI:IPI00230220 IPI:IPI00230221
IPI:IPI00400171 RefSeq:NP_001258478.1 RefSeq:NP_001258479.1
RefSeq:NP_001258480.1 RefSeq:NP_001258481.1 RefSeq:NP_001258482.1
RefSeq:NP_001258483.1 RefSeq:NP_001258484.1 RefSeq:NP_001258485.1
RefSeq:NP_001258486.1 RefSeq:NP_001258487.1 RefSeq:NP_001258488.1
RefSeq:NP_033776.1 UniGene:Mm.35300 ProteinModelPortal:Q9Z0E3
SMR:Q9Z0E3 DIP:DIP-31030N IntAct:Q9Z0E3 STRING:Q9Z0E3
PhosphoSite:Q9Z0E3 PRIDE:Q9Z0E3 Ensembl:ENSMUST00000019257
Ensembl:ENSMUST00000105395 Ensembl:ENSMUST00000105396
Ensembl:ENSMUST00000128241 Ensembl:ENSMUST00000130972
Ensembl:ENSMUST00000140636 Ensembl:ENSMUST00000145975
Ensembl:ENSMUST00000148469 Ensembl:ENSMUST00000154374
Ensembl:ENSMUST00000155021 Ensembl:ENSMUST00000156417 GeneID:11634
KEGG:mmu:11634 UCSC:uc007fws.1 UCSC:uc007fwt.1 UCSC:uc007fwu.1
UCSC:uc007fwv.1 UCSC:uc007fww.1 UCSC:uc007fwx.1 UCSC:uc007fwz.1
UCSC:uc007fxa.1 UCSC:uc007fxb.1 GeneTree:ENSGT00440000034278
InParanoid:Q9Z0E3 ChiTaRS:AIRE NextBio:279201 Bgee:Q9Z0E3
Genevestigator:Q9Z0E3 GermOnline:ENSMUSG00000000731 Uniprot:Q9Z0E3
Length = 552
Score = 143 (55.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 356 DEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCC 404
++K DE C++C GGEL+ CD CP +FH +CL L ++P G W C SCC
Sbjct: 294 NQKNEDE-CAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRC-SCC 342
Score = 44 (20.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 16/41 (39%), Positives = 17/41 (41%)
Query: 401 PSCCCRICGIGKRKFEEKTEHSVDDVLRICGQCEHNFHVGC 441
PS C +CG G TE VLR C C FH C
Sbjct: 430 PSARCSVCGDG-------TE-----VLR-CAHCAAAFHWRC 457
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 155 (59.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSD-----EKQND---EICSICQYGGELVLCD 377
EG C+K+ + S+ + I + E+++D E C +C+ GGEL+ CD
Sbjct: 399 EGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCD 458
Query: 378 DCPSSFHKSCL--VLNDLPKGNWFCPSCCC 405
CPSS+H CL L ++P G W CP C C
Sbjct: 459 TCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 488
Score = 146 (56.5 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 335 QKKI-LCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LN 391
+KK+ K + + ++ E + + C +CQ GGE++LCD CP ++H CL +
Sbjct: 336 RKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDME 395
Query: 392 DLPKGNWFCPSC 403
P+G W CP C
Sbjct: 396 KAPEGKWSCPHC 407
Score = 46 (21.3 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L +W C C + + +IL
Sbjct: 454 LLCCDTCPSSYHIHCLNPP----LPEIPNGEWLCPRCTCPALKGKVQKIL 499
Score = 44 (20.5 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVRD----HHGPSNSKEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R + G ++ ++ +NQS SVA + E
Sbjct: 1309 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDE 1368
Query: 529 CFE 531
F+
Sbjct: 1369 DFD 1371
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 155 (59.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSD-----EKQND---EICSICQYGGELVLCD 377
EG C+K+ + S+ + I + E+++D E C +C+ GGEL+ CD
Sbjct: 399 EGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCD 458
Query: 378 DCPSSFHKSCL--VLNDLPKGNWFCPSCCC 405
CPSS+H CL L ++P G W CP C C
Sbjct: 459 TCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 488
Score = 147 (56.8 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 335 QKKI-LCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LN 391
+KK+ K + + ++ E + + C +CQ GGE++LCD CP ++H CL +
Sbjct: 336 RKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDME 395
Query: 392 DLPKGNWFCPSC 403
P+G W CP C
Sbjct: 396 KAPEGKWSCPHC 407
Score = 46 (21.3 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L +W C C + + +IL
Sbjct: 454 LLCCDTCPSSYHIHCLNPP----LPEIPNGEWLCPRCTCPALKGKVQKIL 499
Score = 44 (20.5 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVRD----HHGPSNSKEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R + G ++ ++ +NQS SVA + E
Sbjct: 1309 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDE 1368
Query: 529 CFE 531
F+
Sbjct: 1369 DFD 1371
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 162 (62.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 50/175 (28%), Positives = 73/175 (41%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNW 398
KN+ E ++ + C +CQ GGE++LCD CP ++H CL L++ P+G W
Sbjct: 357 KNKLKKTKNFPEGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKW 416
Query: 399 FCPSCCCRICGIGKRKFEEKTEHS-----VDD--VLRICGQCEHNFHVGCIEKSRAINLN 451
CP C G G + E+ EH D L C C +H C+ L+
Sbjct: 417 SCPHC--EADG-GAAEEEDDDEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPP----LD 469
Query: 452 NCSQNKWFCSDGCEVISSCLHEILDKPFQLGVDDLTWRLLKSMEVRDHHGPSNSK 506
W C C SC + K ++ +TWR + + GPS SK
Sbjct: 470 TIPDGDWRCPR-C----SC-PPLTGKAEKI----ITWRWAQRS---NDDGPSTSK 511
Score = 159 (61.0 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 42/134 (31%), Positives = 63/134 (47%)
Query: 356 DEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCR-ICGIGK 412
D+ ++ E C +C+ GGEL+ CD CPS++H CL L+ +P G+W CP C C + G +
Sbjct: 432 DDDEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSCPPLTGKAE 491
Query: 413 RKFEEK-TEHSVDDVLRIC-GQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCEVISSC 470
+ + + S DD G N V + I +N S W C EV
Sbjct: 492 KIITWRWAQRSNDDGPSTSKGSKNSNSRV----REYFIKWHNMSY--WHCEWVPEVQLDV 545
Query: 471 LHEILDKPFQLGVD 484
H ++ + FQ D
Sbjct: 546 HHPLMIRSFQRKYD 559
Score = 37 (18.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 590 LMNELEKLLIELGVERLVLPAVPGVVDTWTNKFGFSKMTESERL 633
++N+LE+LL ++ + LPA + + S+ + RL
Sbjct: 1883 VLNQLEELLSDMKSDVSRLPATLARIPPVAQRLQMSERSILSRL 1926
>UNIPROTKB|F1SNJ6 [details] [associations]
symbol:LOC100620590 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0042981 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0046777 GO:GO:0003682 GO:GO:0004672 GO:GO:0031647
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 EMBL:FP236752 Ensembl:ENSSSCT00000017986
Uniprot:F1SNJ6
Length = 301
Score = 136 (52.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 356 DEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
++ N++ C++CQ GGEL+ C+ CP FH SC V L + P G W C C
Sbjct: 72 EDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFC 121
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 149 (57.5 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
++N++ C++C+ GGEL+ CD CP +FH +CL L D+P G W C SC
Sbjct: 301 QKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLRDIPSGTWRCSSC 348
Score = 37 (18.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 12/53 (22%), Positives = 20/53 (37%)
Query: 48 SSSKGVFRYTSPNGNPYLSLSQVCRELGDSVDDVPSEVSHDKVVN---IPPQH 97
SS G P+ P + C LG+ + + + V V+ +P H
Sbjct: 153 SSPAGSQAKAKPSKKPDSNAEPQCLPLGNGIQSMSTSVQRAVAVSSGDVPGAH 205
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 161 (61.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQND--EICSICQYGGELVLCDDCPSSF 383
EG C+K+ + D +E+++D E C +C+ GGEL+ CD CPSS+
Sbjct: 324 EGKWSCPHCEKEGIQWEPKDDDDDEDEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSY 383
Query: 384 HKSCL--VLNDLPKGNWFCPSCCC 405
H CL L ++P G W CP C C
Sbjct: 384 HLHCLNPPLPEIPNGEWLCPRCTC 407
Score = 145 (56.1 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 341 KNRSS-TRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGN 397
+N+ S S D E + + C +CQ GGE++LCD CP ++H CL L P+G
Sbjct: 267 RNQGSPAHSPVDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGK 326
Query: 398 WFCPSC 403
W CP C
Sbjct: 327 WSCPHC 332
Score = 41 (19.5 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFC 460
L C C ++H+ C+ L +W C
Sbjct: 373 LLCCDACPSSYHLHCLNPP----LPEIPNGEWLC 402
Score = 37 (18.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 590 LMNELEKLLIELGVERLVLPAV 611
++N+LE+LL ++ + LP++
Sbjct: 1752 VLNQLEELLSDMKADVTRLPSM 1773
>UNIPROTKB|E7EN20 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL390241 EMBL:AL035410 HGNC:HGNC:16290
ChiTaRS:TRIM33 IPI:IPI00748247 ProteinModelPortal:E7EN20 SMR:E7EN20
Ensembl:ENST00000450349 UCSC:uc010owr.2 ArrayExpress:E7EN20
Bgee:E7EN20 Uniprot:E7EN20
Length = 759
Score = 142 (55.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 41/131 (31%), Positives = 60/131 (45%)
Query: 299 SKVFTLSGFEAHAGSQKHRPT-ANIILNEGG-KPLLECQKKILCKNRSSTRSQHDSITSD 356
S++ L+ E H K P N + G L+ + I S R D D
Sbjct: 458 SELDALASLENHV---KIEPADMNESCKQSGLSSLVNGKSPIRSLMHRSARIGGDGNNKD 514
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRK 414
+ N++ C++CQ GG+L+ C+ CP FH +C V L P G+W C C R IGK +
Sbjct: 515 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC--R--DIGKPE 570
Query: 415 FE---EKTEHS 422
E + +HS
Sbjct: 571 VEYDCDNLQHS 581
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 155 (59.6 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSD-----EKQND---EICSICQYGGELVLCD 377
EG C+K+ + S+ + I + E+++D E C +C+ GGEL+ CD
Sbjct: 406 EGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCD 465
Query: 378 DCPSSFHKSCL--VLNDLPKGNWFCPSCCC 405
CPSS+H CL L ++P G W CP C C
Sbjct: 466 TCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 495
Score = 146 (56.5 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 335 QKKI-LCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LN 391
+KK+ K + + ++ E + + C +CQ GGE++LCD CP ++H CL +
Sbjct: 343 RKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDME 402
Query: 392 DLPKGNWFCPSC 403
P+G W CP C
Sbjct: 403 KAPEGKWSCPHC 414
Score = 46 (21.3 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 70 VCRELGDSVDDVPSEVSHDKVV 91
+CR+LGDS + P V ++ V
Sbjct: 78 LCRQLGDSSGEGPEFVEEEEEV 99
Score = 46 (21.3 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L +W C C + + +IL
Sbjct: 461 LLCCDTCPSSYHIHCLNPP----LPEIPNGEWLCPRCTCPALKGKVQKIL 506
Score = 44 (20.5 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVRD----HHGPSNSKEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R + G ++ ++ +NQS SVA + E
Sbjct: 1316 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDE 1375
Query: 529 CFE 531
F+
Sbjct: 1376 DFD 1378
Score = 38 (18.4 bits), Expect = 8.3e-05, Sum P(4) = 8.3e-05
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 504 NS-KEMEEALMENQSKLSVALDVMHECFEP-IKDVLTERDLVE 544
NS KE E A E + K S A + EC +P + E+ L+E
Sbjct: 1569 NSLKEEESAEGEKEVK-SAAPEATVECTQPPVPASEDEKVLIE 1610
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 155 (59.6 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSD-----EKQND---EICSICQYGGELVLCD 377
EG C+K+ + S+ + I + E+++D E C +C+ GGEL+ CD
Sbjct: 406 EGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCD 465
Query: 378 DCPSSFHKSCL--VLNDLPKGNWFCPSCCC 405
CPSS+H CL L ++P G W CP C C
Sbjct: 466 TCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 495
Score = 146 (56.5 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 335 QKKI-LCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LN 391
+KK+ K + + ++ E + + C +CQ GGE++LCD CP ++H CL +
Sbjct: 343 RKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDME 402
Query: 392 DLPKGNWFCPSC 403
P+G W CP C
Sbjct: 403 KAPEGKWSCPHC 414
Score = 46 (21.3 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 70 VCRELGDSVDDVPSEVSHDKVV 91
+CR+LGDS + P V ++ V
Sbjct: 78 LCRQLGDSSGEGPEFVEEEEEV 99
Score = 46 (21.3 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L +W C C + + +IL
Sbjct: 461 LLCCDTCPSSYHIHCLNPP----LPEIPNGEWLCPRCTCPALKGKVQKIL 506
Score = 44 (20.5 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVRD----HHGPSNSKEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R + G ++ ++ +NQS SVA + E
Sbjct: 1316 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDE 1375
Query: 529 CFE 531
F+
Sbjct: 1376 DFD 1378
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 155 (59.6 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSD-----EKQND---EICSICQYGGELVLCD 377
EG C+K+ + S+ + I + E+++D E C +C+ GGEL+ CD
Sbjct: 406 EGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCD 465
Query: 378 DCPSSFHKSCL--VLNDLPKGNWFCPSCCC 405
CPSS+H CL L ++P G W CP C C
Sbjct: 466 TCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 495
Score = 146 (56.5 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 335 QKKI-LCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LN 391
+KK+ K + + ++ E + + C +CQ GGE++LCD CP ++H CL +
Sbjct: 343 RKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDME 402
Query: 392 DLPKGNWFCPSC 403
P+G W CP C
Sbjct: 403 KAPEGKWSCPHC 414
Score = 46 (21.3 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 70 VCRELGDSVDDVPSEVSHDKVV 91
+CR+LGDS + P V ++ V
Sbjct: 78 LCRQLGDSSGEGPEFVEEEEEV 99
Score = 46 (21.3 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L +W C C + + +IL
Sbjct: 461 LLCCDTCPSSYHIHCLNPP----LPEIPNGEWLCPRCTCPALKGKVQKIL 506
Score = 44 (20.5 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVRD----HHGPSNSKEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R + G ++ ++ +NQS SVA + E
Sbjct: 1316 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDE 1375
Query: 529 CFE 531
F+
Sbjct: 1376 DFD 1378
>UNIPROTKB|F1NRM1 [details] [associations]
symbol:F1NRM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS51414 SMART:SM00249
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI01017196 Ensembl:ENSGALT00000041318 ArrayExpress:F1NRM1
Uniprot:F1NRM1
Length = 537
Score = 140 (54.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+ N++ C++C GGEL+ CD CP +FH CLV L +P+G W C SC
Sbjct: 421 QDNEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPRGLWLCSSC 468
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 159 (61.0 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQND--EICSICQYGGELVLCDDCPSSF 383
EG C+K+ + + + +E+++D E C +C+ GGEL+ CD CPSS+
Sbjct: 242 EGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSY 301
Query: 384 HKSCL--VLNDLPKGNWFCPSCCC 405
H CL L ++P G W CP C C
Sbjct: 302 HLHCLNPPLPEIPNGEWLCPRCTC 325
Score = 144 (55.7 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 31/94 (32%), Positives = 45/94 (47%)
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCR-ICGIGKR 413
E + + C +CQ GGE++LCD CP ++H CL L P+G W CP C I K
Sbjct: 202 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKD 261
Query: 414 KFEEKTE----HSVDDVLRICGQCEHNFHVGCIE 443
+E+ E DD + C C+ + C +
Sbjct: 262 DDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCD 295
Score = 48 (22.0 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVR---DHHGPSNS-KEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R +++ S +E ++ L +NQS+ S+ + E
Sbjct: 1185 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDE 1244
Query: 529 CFE 531
FE
Sbjct: 1245 DFE 1247
Score = 37 (18.1 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 590 LMNELEKLLIELGVERLVLPAV 611
++N+LE+LL ++ + LP++
Sbjct: 1718 VLNQLEELLSDMKADVTRLPSM 1739
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 155 (59.6 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSD-----EKQND---EICSICQYGGELVLCD 377
EG C+K+ + S+ + I + E+++D E C +C+ GGEL+ CD
Sbjct: 426 EGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCD 485
Query: 378 DCPSSFHKSCL--VLNDLPKGNWFCPSCCC 405
CPSS+H CL L ++P G W CP C C
Sbjct: 486 TCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 515
Score = 146 (56.5 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 335 QKKI-LCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LN 391
+KK+ K + + ++ E + + C +CQ GGE++LCD CP ++H CL +
Sbjct: 363 RKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDME 422
Query: 392 DLPKGNWFCPSC 403
P+G W CP C
Sbjct: 423 KAPEGKWSCPHC 434
Score = 46 (21.3 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 70 VCRELGDSVDDVPSEVSHDKVV 91
+CR+LGDS + P V ++ V
Sbjct: 98 LCRQLGDSSGEGPEFVEEEEEV 119
Score = 46 (21.3 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L +W C C + + +IL
Sbjct: 481 LLCCDTCPSSYHIHCLNPP----LPEIPNGEWLCPRCTCPALKGKVQKIL 526
Score = 44 (20.5 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVRD----HHGPSNSKEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R + G ++ ++ +NQS SVA + E
Sbjct: 1336 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDE 1395
Query: 529 CFE 531
F+
Sbjct: 1396 DFD 1398
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 155 (59.6 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSD-----EKQND---EICSICQYGGELVLCD 377
EG C+K+ + S+ + I + E+++D E C +C+ GGEL+ CD
Sbjct: 428 EGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCD 487
Query: 378 DCPSSFHKSCL--VLNDLPKGNWFCPSCCC 405
CPSS+H CL L ++P G W CP C C
Sbjct: 488 TCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 517
Score = 146 (56.5 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 335 QKKI-LCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LN 391
+KK+ K + + ++ E + + C +CQ GGE++LCD CP ++H CL +
Sbjct: 365 RKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDME 424
Query: 392 DLPKGNWFCPSC 403
P+G W CP C
Sbjct: 425 KAPEGKWSCPHC 436
Score = 46 (21.3 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 70 VCRELGDSVDDVPSEVSHDKVV 91
+CR+LGDS + P V ++ V
Sbjct: 98 LCRQLGDSSGEGPEFVEEEEEV 119
Score = 46 (21.3 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L +W C C + + +IL
Sbjct: 483 LLCCDTCPSSYHIHCLNPP----LPEIPNGEWLCPRCTCPALKGKVQKIL 528
Score = 44 (20.5 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVRD----HHGPSNSKEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R + G ++ ++ +NQS SVA + E
Sbjct: 1338 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDE 1397
Query: 529 CFE 531
F+
Sbjct: 1398 DFD 1400
>UNIPROTKB|F1P5H8 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=IEA]
[GO:0070412 "R-SMAD binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 OMA:PIRSLMH EMBL:AADN02045019
IPI:IPI00589805 Ensembl:ENSGALT00000003070 Uniprot:F1P5H8
Length = 947
Score = 143 (55.4 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHK 385
+ G LL + + S R+ + D+ N++ C++CQ GG+L+ C+ CP FH
Sbjct: 689 QSGHGLLNGKSPMRSLMHRSARTGGEGTNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHL 748
Query: 386 SCLV--LNDLPKGNWFCPSC 403
+C V L P G+W C C
Sbjct: 749 TCHVPTLLSFPSGDWICTFC 768
>RGD|1307748 [details] [associations]
symbol:Nsd1 "nuclear receptor binding SET domain protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001702 "gastrulation with mouth forming second"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003712
"transcription cofactor activity" evidence=IEA;ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0010452
"histone H3-K36 methylation" evidence=ISO] [GO:0016571 "histone
methylation" evidence=ISO] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISO] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0042054 "histone
methyltransferase activity" evidence=ISO] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=ISO]
[GO:0042974 "retinoic acid receptor binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1307748 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:CH474032
CTD:64324 KO:K15588 OrthoDB:EOG49GKFN IPI:IPI00779102
RefSeq:NP_001100807.1 UniGene:Rn.224915 Ensembl:ENSRNOT00000060928
GeneID:306764 KEGG:rno:306764 UCSC:RGD:1307748 NextBio:656473
Uniprot:D4AA06
Length = 2381
Score = 156 (60.0 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 320 ANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDC 379
AN G +L I+C N + R + E N C +C GG L+ CD C
Sbjct: 1360 ANDFCLAAGSKIL-ASNSIICPNHFTPRR---GCRNHEHVNVSWCFVCSEGGSLLCCDSC 1415
Query: 380 PSSFHKSCLVLNDLPKGNWFCPSC 403
P++FH+ CL + D+P+GNW+C C
Sbjct: 1416 PAAFHRECLNI-DIPEGNWYCNDC 1438
Score = 44 (20.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 76 DSVDDVPSEVSHDKVVNIPPQHCPEAVVFWYEHGLEKKNK 115
D +D SE HD ++N C +++ F EH ++K K
Sbjct: 151 DCANDPDSE--HDLLLN----GCLKSLAFDSEHSADEKEK 184
>UNIPROTKB|F1S3C1 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:NIDKMRH
EMBL:CU915382 Ensembl:ENSSSCT00000015341 Uniprot:F1S3C1
Length = 2394
Score = 156 (60.0 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 320 ANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDC 379
AN G +L I+C N + R + E N C +C GG L+ CD C
Sbjct: 1367 ANDFCLAAGSKIL-ASNSIICPNHFTPRR---GCRNHEHVNVSWCFVCSEGGSLLCCDSC 1422
Query: 380 PSSFHKSCLVLNDLPKGNWFCPSC 403
P++FH+ CL + D+P+GNW+C C
Sbjct: 1423 PAAFHRECLNI-DIPEGNWYCNDC 1445
Score = 44 (20.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 76 DSVDDVPSEVSHDKVVNIPPQHCPEAVVFWYEHGLEKKNK 115
D +D SE HD ++N C +++ F EH ++K K
Sbjct: 150 DCTNDPESE--HDLLLN----GCLKSLAFDSEHSADEKEK 183
>UNIPROTKB|J9NVX7 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002967
EMBL:AAEX03002968 EMBL:AAEX03002969 EMBL:AAEX03002970
Ensembl:ENSCAFT00000045272 Uniprot:J9NVX7
Length = 2429
Score = 156 (60.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 320 ANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDC 379
AN G +L I+C N + R + E N C +C GG L+ CD C
Sbjct: 1402 ANDFCLAAGSKIL-ASNSIICPNHFTPRR---GCRNHEHVNVSWCFVCSEGGSLLCCDSC 1457
Query: 380 PSSFHKSCLVLNDLPKGNWFCPSC 403
P++FH+ CL + D+P+GNW+C C
Sbjct: 1458 PAAFHRECLNI-DIPEGNWYCNDC 1480
Score = 44 (20.5 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 76 DSVDDVPSEVSHDKVVNIPPQHCPEAVVFWYEHGLEKKNK 115
D +D SE HD ++N C +++ F EH ++K K
Sbjct: 190 DCTNDPESE--HDLLLN----GCLKSLAFDSEHSADEKEK 223
Score = 38 (18.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 107 EHGLEKKNKSNRDMLLKAKMHLLSLG 132
+H EKK K R ++ +K+ L +G
Sbjct: 332 KHSEEKK-KLQRGLMCSSKVQLCYIG 356
>UNIPROTKB|J9P6F3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AAEX03010393 Ensembl:ENSCAFT00000048373
Uniprot:J9P6F3
Length = 850
Score = 142 (55.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 32/85 (37%), Positives = 43/85 (50%)
Query: 341 KNRSSTRSQHDSITSDEKQ-NDEICSICQYGGELVLCD--DCPSSFHKSCLVLNDLPKGN 397
KN + + + I ++ KQ +++ C C GGELV+CD DCP ++H CL L P G
Sbjct: 714 KN-AKLKQKRRKIKAEPKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGK 772
Query: 398 WFCPSCCCRICGIGKRKFEEKTEHS 422
W CP C C F E HS
Sbjct: 773 WECPWHQCEECSSAAVSFCEFCPHS 797
>UNIPROTKB|H0Y612 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL390241
EMBL:AL035410 HGNC:HGNC:16290 ChiTaRS:TRIM33
ProteinModelPortal:H0Y612 PRIDE:H0Y612 Ensembl:ENST00000448034
Bgee:H0Y612 Uniprot:H0Y612
Length = 888
Score = 142 (55.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 41/131 (31%), Positives = 60/131 (45%)
Query: 299 SKVFTLSGFEAHAGSQKHRPT-ANIILNEGG-KPLLECQKKILCKNRSSTRSQHDSITSD 356
S++ L+ E H K P N + G L+ + I S R D D
Sbjct: 587 SELDALASLENHV---KIEPADMNESCKQSGLSSLVNGKSPIRSLMHRSARIGGDGNNKD 643
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRK 414
+ N++ C++CQ GG+L+ C+ CP FH +C V L P G+W C C R IGK +
Sbjct: 644 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC--R--DIGKPE 699
Query: 415 FE---EKTEHS 422
E + +HS
Sbjct: 700 VEYDCDNLQHS 710
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 159 (61.0 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQND--EICSICQYGGELVLCDDCPSSF 383
EG C+K+ + + + +E+++D E C +C+ GGEL+ CD CPSS+
Sbjct: 377 EGKWSCPHCEKEGIQWEPKDDDEEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSY 436
Query: 384 HKSCL--VLNDLPKGNWFCPSCCC 405
H CL L ++P G W CP C C
Sbjct: 437 HLHCLNPPLPEIPNGEWLCPRCTC 460
Score = 156 (60.0 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 37/119 (31%), Positives = 54/119 (45%)
Query: 333 ECQKKILCKNRSSTRSQH-DSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--V 389
EC + KN+ + + D E + + C +CQ GGE++LCD CP ++H CL
Sbjct: 312 ECSAALGKKNKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPE 371
Query: 390 LNDLPKGNWFCPSCCCR-ICGIGKRKFEEKTE----HSVDDVLRICGQCEHNFHVGCIE 443
L P+G W CP C I K EE+ E DD + C C+ + C +
Sbjct: 372 LEKAPEGKWSCPHCEKEGIQWEPKDDDEEEEEGGCEEEEDDHMEFCRVCKDGGELLCCD 430
Score = 48 (22.0 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVR---DHHGPSNS-KEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R +++ S +E ++ L +NQS+ S+ + E
Sbjct: 1320 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDE 1379
Query: 529 CFE 531
FE
Sbjct: 1380 DFE 1382
Score = 40 (19.1 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 491 LKSMEVRDHHGPSNSKEM-EEALMENQSKLSVALDVMHECFEPIKD-VLTERDLVED 545
L +E D H S+SK+ E ME K + + +P+K+ L +++ V D
Sbjct: 1597 LDRVEAEDKHQSSDSKDRAREERMEEVEKAQGSPE------QPLKEETLPDKEPVPD 1647
Score = 37 (18.1 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 590 LMNELEKLLIELGVERLVLPAV 611
++N+LE+LL ++ + LP++
Sbjct: 1854 VLNQLEELLSDMKADVTRLPSM 1875
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 159 (61.0 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQND--EICSICQYGGELVLCDDCPSSF 383
EG C+K+ + + + +E+++D E C +C+ GGEL+ CD CPSS+
Sbjct: 379 EGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSY 438
Query: 384 HKSCL--VLNDLPKGNWFCPSCCC 405
H CL L ++P G W CP C C
Sbjct: 439 HLHCLNPPLPEIPNGEWLCPRCTC 462
Score = 148 (57.2 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 333 ECQKKILCKNRSSTRSQH-DSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--V 389
EC + K++ + + D E + + C +CQ GGE++LCD CP ++H CL
Sbjct: 314 ECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPE 373
Query: 390 LNDLPKGNWFCPSCCCR-ICGIGKRKFEEKTE----HSVDDVLRICGQCEHNFHVGCIE 443
L P+G W CP C I K +E+ E DD + C C+ + C +
Sbjct: 374 LEKAPEGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCD 432
Score = 48 (22.0 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVR---DHHGPSNS-KEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R +++ S +E ++ L +NQS+ S+ + E
Sbjct: 1322 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDE 1381
Query: 529 CFE 531
FE
Sbjct: 1382 DFE 1384
Score = 37 (18.1 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 590 LMNELEKLLIELGVERLVLPAV 611
++N+LE+LL ++ + LP++
Sbjct: 1860 VLNQLEELLSDMKADVTRLPSM 1881
>UNIPROTKB|E1C6X8 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GeneTree:ENSGT00700000104009 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 CTD:54904 KO:K11425 OMA:MEKDIHK
EMBL:AADN02054858 IPI:IPI00603343 RefSeq:XP_001232891.1
UniGene:Gga.29652 UniGene:Gga.53440 Ensembl:ENSGALT00000005228
GeneID:426778 KEGG:gga:426778 NextBio:20828194 Uniprot:E1C6X8
Length = 1436
Score = 144 (55.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 33/85 (38%), Positives = 45/85 (52%)
Query: 341 KNRSSTRSQHDSITSDEKQ-NDEICSICQYGGELVLCD--DCPSSFHKSCLVLNDLPKGN 397
KN + + + I +++KQ +++ C C GGELV+CD DCP ++H CL L P G
Sbjct: 1300 KN-AKLKQKKRKIKTEQKQMHEDNCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPFGK 1358
Query: 398 WFCPSCCCRICGIGKRKFEEKTEHS 422
W CP C IC F E HS
Sbjct: 1359 WECPWHQCDICSSPAVSFCEFCPHS 1383
>UNIPROTKB|D4A3R4 [details] [associations]
symbol:Whsc1l1 "Protein Whsc1l1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1308980 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 IPI:IPI00393216 Ensembl:ENSRNOT00000031675
ArrayExpress:D4A3R4 Uniprot:D4A3R4
Length = 1439
Score = 144 (55.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 34/99 (34%), Positives = 47/99 (47%)
Query: 327 GGKPLLECQKKILCKNRSSTRSQHDSITSDEKQ-NDEICSICQYGGELVLCD--DCPSSF 383
G +P C K +++ + ++ KQ +++ C C GGELV+CD DCP ++
Sbjct: 1288 GVRPKSACTSAADEKTKNAKLKKRRRGKAEAKQIHEDYCFQCGDGGELVMCDKKDCPKAY 1347
Query: 384 HKSCLVLNDLPKGNWFCPSCCCRICGIGKRKFEEKTEHS 422
H CL L P G W CP C CG F E HS
Sbjct: 1348 HLLCLNLTQPPYGKWECPWHQCDECGSAAISFCEFCPHS 1386
>RGD|1308980 [details] [associations]
symbol:Whsc1l1 "Wolf-Hirschhorn syndrome candidate 1-like 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016571 "histone methylation" evidence=ISO]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA;ISO] [GO:0034968 "histone lysine methylation"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1308980
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 IPI:IPI00204321 Ensembl:ENSRNOT00000021053
UCSC:RGD:1308980 ArrayExpress:D4AC06 Uniprot:D4AC06
Length = 1443
Score = 144 (55.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 34/99 (34%), Positives = 47/99 (47%)
Query: 327 GGKPLLECQKKILCKNRSSTRSQHDSITSDEKQ-NDEICSICQYGGELVLCD--DCPSSF 383
G +P C K +++ + ++ KQ +++ C C GGELV+CD DCP ++
Sbjct: 1292 GVRPKSACTSAADEKTKNAKLKKRRRGKAEAKQIHEDYCFQCGDGGELVMCDKKDCPKAY 1351
Query: 384 HKSCLVLNDLPKGNWFCPSCCCRICGIGKRKFEEKTEHS 422
H CL L P G W CP C CG F E HS
Sbjct: 1352 HLLCLNLTQPPYGKWECPWHQCDECGSAAISFCEFCPHS 1390
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 139 (54.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
++N++ C+ C+ GGEL+ CD CP +FH +CL L+++P G W C +C
Sbjct: 301 QKNEDECAACRDGGELLCCDGCPRAFHLACLTPPLSEIPSGTWRCSNC 348
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 158 (60.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 33/88 (37%), Positives = 46/88 (52%)
Query: 326 EGGKPLLECQKK-ILCKNRS-STRSQHDSITSDEKQND----EICSICQYGGELVLCDDC 379
EG C+K I + R ++ + D+ E + D E C +C+ GGEL+ CD C
Sbjct: 389 EGTWSCPHCEKMGIQWEAREDASEGEEDNEAGGEAEEDDHHMEFCRVCKDGGELLCCDSC 448
Query: 380 PSSFHKSCL--VLNDLPKGNWFCPSCCC 405
PSS+H CL L ++P G W CP C C
Sbjct: 449 PSSYHIHCLNPPLPEIPNGEWICPRCTC 476
Score = 151 (58.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNW 398
K + T+ D E + + C +CQ GGE++LCD CP ++H CL + P+G W
Sbjct: 334 KPKKKTKKDEDG-DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTW 392
Query: 399 FCPSCCCRICGIGKRKFEEKTEHSVDDVLRICGQCEHNFH 438
CP C GI E+ +E D+ G+ E + H
Sbjct: 393 SCPHC--EKMGIQWEAREDASEGEEDN--EAGGEAEEDDH 428
Score = 39 (18.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 15/72 (20%), Positives = 31/72 (43%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVRD----HHGPSNSKEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R + G ++ ++ + QS SVA + E
Sbjct: 1297 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDGQSDYSVASEEGDE 1356
Query: 529 CFEPIKDVLTER 540
F+ + + R
Sbjct: 1357 DFDERSEANSRR 1368
>UNIPROTKB|Q96L73 [details] [associations]
symbol:NSD1 "Histone-lysine N-methyltransferase, H3
lysine-36 and H4 lysine-20 specific" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0016571 "histone methylation" evidence=ISS] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISS]
[GO:0042799 "histone methyltransferase activity (H4-K20 specific)"
evidence=ISS] [GO:0042974 "retinoic acid receptor binding"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISS] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISS;IDA] [GO:0050681 "androgen receptor
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0030331 "estrogen receptor binding"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0010452 "histone H3-K36 methylation" evidence=ISS;IDA]
[GO:0034770 "histone H4-K20 methylation" evidence=ISS]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0003714 GO:GO:0005694
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0050681 GO:GO:0030331
GO:GO:0046966 eggNOG:COG2940 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0016922 GO:GO:0046965 SMART:SM00293 GO:GO:0046975 MIM:130650
Orphanet:3447 Orphanet:821 EMBL:AF380302 EMBL:AY049721
EMBL:AF395588 EMBL:AF322907 IPI:IPI00102107 IPI:IPI00173901
IPI:IPI00332367 RefSeq:NP_071900.2 RefSeq:NP_758859.1
UniGene:Hs.106861 PDB:3OOI PDBsum:3OOI ProteinModelPortal:Q96L73
SMR:Q96L73 DIP:DIP-58517N IntAct:Q96L73 STRING:Q96L73
PhosphoSite:Q96L73 DMDM:32469769 PaxDb:Q96L73 PRIDE:Q96L73
Ensembl:ENST00000347982 Ensembl:ENST00000354179
Ensembl:ENST00000361032 Ensembl:ENST00000439151 GeneID:64324
KEGG:hsa:64324 UCSC:uc003mfr.4 UCSC:uc003mfs.1 UCSC:uc003mft.4
CTD:64324 GeneCards:GC05P176560 HGNC:HGNC:14234 MIM:117550
MIM:277590 MIM:606681 neXtProt:NX_Q96L73 Orphanet:228415
Orphanet:238613 PharmGKB:PA31790 HOGENOM:HOG000113857
HOVERGEN:HBG007518 InParanoid:Q96L73 KO:K15588 OMA:NIDKMRH
OrthoDB:EOG49GKFN PhylomeDB:Q96L73 ChiTaRS:NSD1 GenomeRNAi:64324
NextBio:66241 ArrayExpress:Q96L73 Bgee:Q96L73 CleanEx:HS_NSD1
Genevestigator:Q96L73 GermOnline:ENSG00000165671 Uniprot:Q96L73
Length = 2696
Score = 156 (60.0 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 320 ANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDC 379
AN G +L I+C N + R + E N C +C GG L+ CD C
Sbjct: 1670 ANDFCLAAGSKIL-ASNSIICPNHFTPRR---GCRNHEHVNVSWCFVCSEGGSLLCCDSC 1725
Query: 380 PSSFHKSCLVLNDLPKGNWFCPSC 403
P++FH+ CL + D+P+GNW+C C
Sbjct: 1726 PAAFHRECLNI-DIPEGNWYCNDC 1748
Score = 44 (20.5 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 76 DSVDDVPSEVSHDKVVNIPPQHCPEAVVFWYEHGLEKKNK 115
D +D SE HD ++N C +++ F EH ++K K
Sbjct: 459 DCTNDPESE--HDLLLN----GCLKSLAFDSEHSADEKEK 492
>UNIPROTKB|E2R3Q9 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 CTD:64324
KO:K15588 OMA:NIDKMRH EMBL:AAEX03002967 EMBL:AAEX03002968
EMBL:AAEX03002969 EMBL:AAEX03002970 RefSeq:XP_865778.1
Ensembl:ENSCAFT00000026110 GeneID:489094 KEGG:cfa:489094
Uniprot:E2R3Q9
Length = 2698
Score = 156 (60.0 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 320 ANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDC 379
AN G +L I+C N + R + E N C +C GG L+ CD C
Sbjct: 1671 ANDFCLAAGSKIL-ASNSIICPNHFTPRR---GCRNHEHVNVSWCFVCSEGGSLLCCDSC 1726
Query: 380 PSSFHKSCLVLNDLPKGNWFCPSC 403
P++FH+ CL + D+P+GNW+C C
Sbjct: 1727 PAAFHRECLNI-DIPEGNWYCNDC 1749
Score = 44 (20.5 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 76 DSVDDVPSEVSHDKVVNIPPQHCPEAVVFWYEHGLEKKNK 115
D +D SE HD ++N C +++ F EH ++K K
Sbjct: 459 DCTNDPESE--HDLLLN----GCLKSLAFDSEHSADEKEK 492
Score = 38 (18.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 107 EHGLEKKNKSNRDMLLKAKMHLLSLG 132
+H EKK K R ++ +K+ L +G
Sbjct: 601 KHSEEKK-KLQRGLMCSSKVQLCYIG 625
>UNIPROTKB|E1BM66 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:NIDKMRH EMBL:DAAA02020051 EMBL:DAAA02020048
EMBL:DAAA02020049 EMBL:DAAA02020050 IPI:IPI00716946
Ensembl:ENSBTAT00000034204 Uniprot:E1BM66
Length = 2698
Score = 156 (60.0 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 320 ANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDC 379
AN G +L I+C N + R + E N C +C GG L+ CD C
Sbjct: 1673 ANDFCLAAGSKIL-ASNSIICPNHFTPRR---GCRNHEHVNVSWCFVCSEGGSLLCCDSC 1728
Query: 380 PSSFHKSCLVLNDLPKGNWFCPSC 403
P++FH+ CL + D+P+GNW+C C
Sbjct: 1729 PAAFHRECLNI-DIPEGNWYCNDC 1751
Score = 44 (20.5 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 76 DSVDDVPSEVSHDKVVNIPPQHCPEAVVFWYEHGLEKKNK 115
D +D SE HD ++N C +++ F EH ++K K
Sbjct: 459 DCTNDPESE--HDLLLN----GCLKSLAFDSEHSADEKEK 492
>UNIPROTKB|Q96EK2 [details] [associations]
symbol:PHF21B "PHD finger protein 21B" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:CH471138
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 HOVERGEN:HBG080293
HOGENOM:HOG000231466 EMBL:CR456448 EMBL:AK092243 EMBL:AK297317
EMBL:AL049760 EMBL:Z83838 EMBL:BC012187 IPI:IPI00738578
IPI:IPI00739761 IPI:IPI01009331 RefSeq:NP_001129334.1
RefSeq:NP_001229379.1 RefSeq:NP_612424.1 UniGene:Hs.254097
ProteinModelPortal:Q96EK2 SMR:Q96EK2 PhosphoSite:Q96EK2
DMDM:74731574 PRIDE:Q96EK2 DNASU:112885 Ensembl:ENST00000313237
Ensembl:ENST00000396103 Ensembl:ENST00000404079 GeneID:112885
KEGG:hsa:112885 UCSC:uc003bfn.3 UCSC:uc011aql.2 CTD:112885
GeneCards:GC22M045277 HGNC:HGNC:25161 neXtProt:NX_Q96EK2
PharmGKB:PA134872136 eggNOG:NOG291382 InParanoid:Q96EK2 OMA:SDKQALG
OrthoDB:EOG4P2Q2F PhylomeDB:Q96EK2 ChiTaRS:PHF21B GenomeRNAi:112885
NextBio:78697 ArrayExpress:Q96EK2 Bgee:Q96EK2 CleanEx:HS_PHF21B
Genevestigator:Q96EK2 GermOnline:ENSG00000056487 Uniprot:Q96EK2
Length = 531
Score = 141 (54.7 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 37/108 (34%), Positives = 51/108 (47%)
Query: 304 LSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSST------RSQHDSITSDE 357
L ++ +K R TAN + G LLE ++K L N + R+ D +E
Sbjct: 293 LEEIQSKRQERKRRSTANPAYS--G--LLETERKRLASNYLNNPLFLTARANEDPCWKNE 348
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+DE C+ C+ G L C CP ++H SCL L PKG W CP C
Sbjct: 349 ITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRC 396
Score = 43 (20.2 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 149 TSPSGAVYISLRTACKACMDEGLDSKGMVSC-NKSPSATTSTKH 191
TSPS A ++ TA D ++S NK P S+ H
Sbjct: 155 TSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKPPPRLLSSPH 198
>UNIPROTKB|F1NMG7 [details] [associations]
symbol:F1NMG7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016
PROSITE:PS51414 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI00575755 Ensembl:ENSGALT00000002020 ArrayExpress:F1NMG7
Uniprot:F1NMG7
Length = 584
Score = 139 (54.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCR 406
+ N++ C++C GGEL+ CD CP +FH CLV L +P G W C SC +
Sbjct: 453 QDNEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSGTWQCSSCVAK 503
>UNIPROTKB|Q9UPN9 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070410 "co-SMAD
binding" evidence=IPI] [GO:0070412 "R-SMAD binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Reactome:REACT_71
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 UniPathway:UPA00143 EMBL:AF119043 Prosite:PS00518
Reactome:REACT_111102 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0000122 GO:GO:0007179 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0006367
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0030514 GO:GO:0017015
MIM:188550 Orphanet:146 PDB:3U5N PDB:3U5O PDB:3U5P PDBsum:3U5N
PDBsum:3U5O PDBsum:3U5P EMBL:AL390241 HOVERGEN:HBG054599
EMBL:AF220136 EMBL:AF220137 EMBL:AB029036 EMBL:AL035410
EMBL:AJ132948 IPI:IPI00010252 IPI:IPI00221114 RefSeq:NP_056990.3
RefSeq:NP_148980.2 UniGene:Hs.26837 PDB:3U5M PDBsum:3U5M
ProteinModelPortal:Q9UPN9 SMR:Q9UPN9 DIP:DIP-54262N IntAct:Q9UPN9
STRING:Q9UPN9 PhosphoSite:Q9UPN9 DMDM:12643365 PaxDb:Q9UPN9
PRIDE:Q9UPN9 Ensembl:ENST00000358465 Ensembl:ENST00000369543
GeneID:51592 KEGG:hsa:51592 UCSC:uc001eew.3 UCSC:uc001eex.3
CTD:51592 GeneCards:GC01M114935 H-InvDB:HIX0000910 HGNC:HGNC:16290
HPA:HPA004345 MIM:605769 neXtProt:NX_Q9UPN9 PharmGKB:PA38118
InParanoid:Q9UPN9 KO:K08883 OMA:PIRSLMH OrthoDB:EOG4SN1N0
PhylomeDB:Q9UPN9 ChiTaRS:TRIM33 GenomeRNAi:51592 NextBio:55433
PMAP-CutDB:Q9UPN9 ArrayExpress:Q9UPN9 Bgee:Q9UPN9 CleanEx:HS_TRIM33
Genevestigator:Q9UPN9 GermOnline:ENSG00000197323 Uniprot:Q9UPN9
Length = 1127
Score = 142 (55.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 41/131 (31%), Positives = 60/131 (45%)
Query: 299 SKVFTLSGFEAHAGSQKHRPT-ANIILNEGG-KPLLECQKKILCKNRSSTRSQHDSITSD 356
S++ L+ E H K P N + G L+ + I S R D D
Sbjct: 826 SELDALASLENHV---KIEPADMNESCKQSGLSSLVNGKSPIRSLMHRSARIGGDGNNKD 882
Query: 357 EKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRK 414
+ N++ C++CQ GG+L+ C+ CP FH +C V L P G+W C C R IGK +
Sbjct: 883 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC--R--DIGKPE 938
Query: 415 FE---EKTEHS 422
E + +HS
Sbjct: 939 VEYDCDNLQHS 949
>UNIPROTKB|E2QUJ0 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:MEKDIHK
EMBL:AAEX03010393 Ensembl:ENSCAFT00000009828 Uniprot:E2QUJ0
Length = 1438
Score = 142 (55.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/85 (37%), Positives = 43/85 (50%)
Query: 341 KNRSSTRSQHDSITSDEKQ-NDEICSICQYGGELVLCD--DCPSSFHKSCLVLNDLPKGN 397
KN + + + I ++ KQ +++ C C GGELV+CD DCP ++H CL L P G
Sbjct: 1302 KN-AKLKQKRRKIKAEPKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGK 1360
Query: 398 WFCPSCCCRICGIGKRKFEEKTEHS 422
W CP C C F E HS
Sbjct: 1361 WECPWHQCEECSSAAVSFCEFCPHS 1385
>ZFIN|ZDB-GENE-120215-66 [details] [associations]
symbol:si:ch73-202g8.3 "si:ch73-202g8.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
ZFIN:ZDB-GENE-120215-66 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR019542 Pfam:PF10513 GeneTree:ENSGT00690000101689
EMBL:CABZ01078060 EMBL:FP017197 IPI:IPI00496233
Ensembl:ENSDART00000075432 Uniprot:E7F8E2
Length = 795
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/156 (24%), Positives = 69/156 (44%)
Query: 331 LLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQY-----GGELVLCDDCPSSFHK 385
L+E +++ C+ + ++ E D +C +C+ G E+V CD+C H+
Sbjct: 166 LVELERR--CQQNMQQQIENQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDNCNVCVHQ 223
Query: 386 SCLVLNDLPKGNWFCPSCC------CRICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFH 438
+C + +P+GNW C +C C +C +R K S + + C
Sbjct: 224 ACYGILKVPQGNWLCRTCALGVQSKCLLCP--RRGGALKPTRSGTKWVHVSCALWIPEVS 281
Query: 439 VGCIEKSRAIN-LNNCSQNKWF--CSDGCEVISSCL 471
+GC EK I +++ ++W CS CE +C+
Sbjct: 282 IGCPEKMEPITKVSHIPASRWALSCSLCCEHSGTCI 317
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 113 (44.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S + + + S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 56 KRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 115
Query: 399 FC 400
C
Sbjct: 116 MC 117
>UNIPROTKB|K7EJ43 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000584685 Uniprot:K7EJ43
Length = 215
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S + + + S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 62 KRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 121
Query: 399 FCPSCCCRICGIGKRKFEEKTE 420
C C R ++K E+K E
Sbjct: 122 MCHRCTVR-----RKKREQKKE 138
>UNIPROTKB|B7ZL11 [details] [associations]
symbol:WHSC1L1 "Histone-lysine N-methyltransferase NSD3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AC087362 EMBL:AC087623
HOVERGEN:HBG079979 UniGene:Hs.608111 HGNC:HGNC:12767
ChiTaRS:WHSC1L1 EMBL:BC143510 IPI:IPI00980085 SMR:B7ZL11
STRING:B7ZL11 Ensembl:ENST00000527502 UCSC:uc011lbm.2
Uniprot:B7ZL11
Length = 1426
Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 30/84 (35%), Positives = 40/84 (47%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSSFHKSCLVLNDLPKGNW 398
KN + + T ++ +++ C C GGELV+CD DCP ++H CL L P G W
Sbjct: 1290 KNAKLKQKRRKIKTEPKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKW 1349
Query: 399 FCPSCCCRICGIGKRKFEEKTEHS 422
CP C C F E HS
Sbjct: 1350 ECPWHQCDECSSAAVSFCEFCPHS 1373
>UNIPROTKB|Q9BZ95 [details] [associations]
symbol:WHSC1L1 "Histone-lysine N-methyltransferase NSD3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0016049 "cell growth" evidence=NAS] [GO:0016571 "histone
methylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IC]
[GO:0030154 "cell differentiation" evidence=NAS] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IDA]
[GO:0034968 "histone lysine methylation" evidence=IDA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0005694 GO:GO:0030154 GO:GO:0006355
EMBL:CH471080 GO:GO:0046872 GO:GO:0016049 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:COG2940 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 PDB:4GNE PDB:4GNF PDB:4GNG PDBsum:4GNE PDBsum:4GNF
PDBsum:4GNG PharmGKB:PA37370 HOVERGEN:HBG079979 EMBL:AF332468
EMBL:AF332469 EMBL:AJ295990 EMBL:AJ295991 EMBL:AJ295992
EMBL:AF255649 EMBL:AK000360 EMBL:AK022560 EMBL:AK127594
EMBL:BC012059 EMBL:BC062631 EMBL:BC101717 EMBL:BC107734
EMBL:BC113469 EMBL:BC115006 IPI:IPI00307783 IPI:IPI00444331
IPI:IPI00743157 IPI:IPI00792713 RefSeq:NP_060248.2
RefSeq:NP_075447.1 UniGene:Hs.608111 PDB:2DAQ PDB:4GND PDBsum:2DAQ
PDBsum:4GND ProteinModelPortal:Q9BZ95 SMR:Q9BZ95 IntAct:Q9BZ95
STRING:Q9BZ95 PhosphoSite:Q9BZ95 DMDM:74761342 PaxDb:Q9BZ95
PRIDE:Q9BZ95 DNASU:54904 Ensembl:ENST00000316985
Ensembl:ENST00000317025 Ensembl:ENST00000433384 GeneID:54904
KEGG:hsa:54904 UCSC:uc003xli.3 UCSC:uc003xlj.3 UCSC:uc010lwe.3
CTD:54904 GeneCards:GC08M038151 HGNC:HGNC:12767 HPA:CAB013721
HPA:HPA005659 HPA:HPA018893 MIM:607083 neXtProt:NX_Q9BZ95
InParanoid:Q9BZ95 KO:K11425 OMA:MEKDIHK ChiTaRS:WHSC1L1
EvolutionaryTrace:Q9BZ95 GenomeRNAi:54904 NextBio:57940
ArrayExpress:Q9BZ95 Bgee:Q9BZ95 Genevestigator:Q9BZ95
GermOnline:ENSG00000147548 Uniprot:Q9BZ95
Length = 1437
Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 30/84 (35%), Positives = 40/84 (47%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSSFHKSCLVLNDLPKGNW 398
KN + + T ++ +++ C C GGELV+CD DCP ++H CL L P G W
Sbjct: 1301 KNAKLKQKRRKIKTEPKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKW 1360
Query: 399 FCPSCCCRICGIGKRKFEEKTEHS 422
CP C C F E HS
Sbjct: 1361 ECPWHQCDECSSAAVSFCEFCPHS 1384
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 141 (54.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 356 DEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLN--DLPKGNWFCPSCCCRICGIGKR 413
+E +N++ C C+ GEL+LCD CP ++H C+ N + P+G+W C C + K
Sbjct: 251 EEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKE 310
Query: 414 KFEEKTEH-----SVDDVLRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCEVI 467
+ ++ + + L +C C +FH CI+ + W C CE +
Sbjct: 311 EPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLT---EVPKEETWSCPR-CETV 365
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 141 (54.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 356 DEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLN--DLPKGNWFCPSCCCRICGIGKR 413
+E +N++ C C+ GEL+LCD CP ++H C+ N + P+G+W C C + K
Sbjct: 251 EEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKE 310
Query: 414 KFEEKTEH-----SVDDVLRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCEVI 467
+ ++ + + L +C C +FH CI+ + W C CE +
Sbjct: 311 EPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLT---EVPKEETWSCPR-CETV 365
>UNIPROTKB|H0YF52 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC091053
EMBL:AC104360 HGNC:HGNC:29005 Ensembl:ENST00000530502
Uniprot:H0YF52
Length = 286
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+N++ C++C GGEL+ CD CP FH SC V L P G W C C
Sbjct: 100 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLC 146
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 155 (59.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNW 398
+N R D + ++ + E C +C+ GGEL+ CD CPSS+H CL L D+P G W
Sbjct: 438 ENDDGRRDDGD-VEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPDIPNGEW 496
Query: 399 FCPSC 403
CP C
Sbjct: 497 ICPRC 501
Score = 145 (56.1 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 34/115 (29%), Positives = 50/115 (43%)
Query: 324 LNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSF 383
+++G K K+ + + E + + C +CQ GGE++LCD CP ++
Sbjct: 338 VSDGSNSRSSRSKNKKAKSSKKKKKMDEDADGYETDHQDYCEVCQQGGEIILCDTCPRAY 397
Query: 384 HKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEEKTE--HSVDDVLRICGQCE 434
H CL + P+G W CP C GI EE +E DD R G E
Sbjct: 398 HMVCLDPDMERAPEGTWSCPHCEKE--GIQWEAREESSEGEEENDDGRRDDGDVE 450
Score = 42 (19.8 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFC 460
L C C ++H+ C+ L + +W C
Sbjct: 469 LLCCDTCPSSYHLHCLNPP----LPDIPNGEWIC 498
Score = 38 (18.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 438 HVGCIEKSRA-INLNNCSQ 455
H+G ++ R +N N+CSQ
Sbjct: 1338 HLGKGKRPRKPVNYNDCSQ 1356
>UNIPROTKB|H0Y9U6 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AL132868 EMBL:AC105448
HGNC:HGNC:12766 ChiTaRS:WHSC1 Ensembl:ENST00000514329
Uniprot:H0Y9U6
Length = 284
Score = 128 (50.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 364 CSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
C +C GG L+ C+ CP++FH CL + ++P G+WFC C
Sbjct: 158 CFVCSKGGSLLCCESCPAAFHPDCLNI-EMPDGSWFCNDC 196
Score = 43 (20.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 58 SPNGNPYLSLSQVCRELGDSVDDVPSEVSHD 88
S + +P SL++ E+ DS D PSE ++
Sbjct: 27 SKSSSPSASLTE--NEVSDSPGDEPSESPYE 55
>SGD|S000004680 [details] [associations]
symbol:RCO1 "Essential subunit of the histone deacetylase
Rpd3S complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0060195 "negative regulation of
antisense RNA transcription" evidence=IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IDA] [GO:0016575
"histone deacetylation" evidence=IMP] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SGD:S000004680 GO:GO:0046872 GO:GO:0008270 EMBL:Z48952
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0033698 GO:GO:0016575 GO:GO:0030174
GO:GO:0032221 GO:GO:0060195 eggNOG:NOG145066
GeneTree:ENSGT00440000033777 PIR:S52835 RefSeq:NP_013791.1
ProteinModelPortal:Q04779 SMR:Q04779 DIP:DIP-1959N IntAct:Q04779
MINT:MINT-497703 STRING:Q04779 PaxDb:Q04779 PeptideAtlas:Q04779
EnsemblFungi:YMR075W GeneID:855097 KEGG:sce:YMR075W CYGD:YMR075w
HOGENOM:HOG000066043 OMA:FLCCDTC OrthoDB:EOG4TQQJV NextBio:978414
Genevestigator:Q04779 GermOnline:YMR075W Uniprot:Q04779
Length = 684
Score = 133 (51.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 335 QKKILCKNRSSTRSQHDSITSD-EKQNDEICSICQYGGELVLCDDCPSSFHKSCLVL--- 390
Q I + +S + D S + +N++ CS C G + CD CP SFH CL
Sbjct: 233 QNSIKSTSNASEKIFRDKNNSTIDFENEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPID 292
Query: 391 -NDLPKGNWFCPSCCCRI 407
N+LPKG+W C C +I
Sbjct: 293 PNNLPKGDWHCNECKFKI 310
Score = 50 (22.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 426 VLRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFC 460
++ C C+ +H+ C+ ++ NL + KW C
Sbjct: 436 LIMTCDYCQTPWHLDCVPRASFKNLGS----KWKC 466
>UNIPROTKB|O15164 [details] [associations]
symbol:TRIM24 "Transcription intermediary factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0071391 "cellular response to estrogen stimulus" evidence=IDA]
[GO:0034056 "estrogen response element binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0002039 "p53 binding"
evidence=IPI] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0031647 "regulation of protein stability"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0005102 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0006366 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 EMBL:CH236950
EMBL:CH471070 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071391 MIM:188550 Orphanet:146
GO:GO:0034056 PDB:3O34 PDB:3O35 PDB:3O37 PDBsum:3O34 PDBsum:3O35
PDBsum:3O37 PDB:3O36 PDBsum:3O36 GO:GO:0070562 GO:GO:0005726
EMBL:AC013429 EMBL:AF009353 EMBL:AF119042 EMBL:AK075306
EMBL:AC008265 EMBL:BC028689 IPI:IPI00005184 IPI:IPI00184317
RefSeq:NP_003843.3 RefSeq:NP_056989.2 UniGene:Hs.490287 PDB:2YYN
PDB:3O33 PDBsum:2YYN PDBsum:3O33 ProteinModelPortal:O15164
SMR:O15164 DIP:DIP-52713N IntAct:O15164 STRING:O15164
PhosphoSite:O15164 PaxDb:O15164 PRIDE:O15164 DNASU:8805
Ensembl:ENST00000343526 Ensembl:ENST00000415680 GeneID:8805
KEGG:hsa:8805 UCSC:uc003vub.3 UCSC:uc003vuc.3 CTD:8805
GeneCards:GC07P138144 HGNC:HGNC:11812 HPA:HPA043495 MIM:603406
neXtProt:NX_O15164 PharmGKB:PA36519 HOGENOM:HOG000252971
HOVERGEN:HBG054599 InParanoid:O15164 KO:K08881 OMA:FWAQNIF
OrthoDB:EOG4P8FH9 PhylomeDB:O15164 ChiTaRS:TRIM24
EvolutionaryTrace:O15164 GenomeRNAi:8805 NextBio:33028
ArrayExpress:O15164 Bgee:O15164 CleanEx:HS_TRIM24
Genevestigator:O15164 GermOnline:ENSG00000122779 Uniprot:O15164
Length = 1050
Score = 138 (53.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 356 DEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
++ N++ C++CQ GGEL+ C+ CP FH SC V L + P G W C C
Sbjct: 821 EDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFC 870
>UNIPROTKB|H0Y4R8 [details] [associations]
symbol:SP100 "Nuclear autoantigen Sp-100" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 PROSITE:PS50016
PROSITE:PS50864 SMART:SM00249 SMART:SM00258 SMART:SM00297
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AC009949 EMBL:AC010149 HGNC:HGNC:11206
ChiTaRS:SP100 ProteinModelPortal:H0Y4R8 Ensembl:ENST00000431952
Uniprot:H0Y4R8
Length = 259
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 38/129 (29%), Positives = 57/129 (44%)
Query: 300 KVFTLSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQ 359
K FT FE G + + + GG L ++IL S ++++ +
Sbjct: 23 KWFTPREFEIE-GDRGASKNWKLSIRCGGYTLKVLMERIL-------ESHNNTLVDPCPE 74
Query: 360 NDEICSICQYGGELVLCDDCPSSFHKSCLVLN-DLPKGNWFCPSCCCRICGIGKRKFEEK 418
N IC +C G L CD CP SFH+ C + + + K W C CRI I +R E +
Sbjct: 75 NSNICEVCNKWGRLFCCDTCPRSFHEHCHIPSVEANKNPWSC--IFCRIKTIQERCPESQ 132
Query: 419 TEHSVDDVL 427
+ H +VL
Sbjct: 133 SGHQESEVL 141
>UNIPROTKB|F1N9E9 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00597924
Ensembl:ENSGALT00000004685 ArrayExpress:F1N9E9 Uniprot:F1N9E9
Length = 2114
Score = 140 (54.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 338 ILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGN 397
I+C N + R + E N C +C GG L+ C+ CP++FH+ CL + ++P+G+
Sbjct: 1291 IICPNHFTARR---GCRNHEHVNVSWCFVCSEGGSLLCCESCPAAFHRECLNI-EMPEGS 1346
Query: 398 WFCPSC 403
W+C C
Sbjct: 1347 WYCNDC 1352
Score = 133 (51.9 bits), Expect = 0.00016, P = 0.00016
Identities = 40/133 (30%), Positives = 54/133 (40%)
Query: 292 GIKCDCCSKVFTLSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSSTRSQHD 351
G+ C T++G AG AN + +P L +K K R + +
Sbjct: 1663 GLYLQCFGNRNTVAGNGGMAGG-----CANTLSVPQSQPTLSEEKSKKLKRRPQMKRRSQ 1717
Query: 352 SITSDEKQNDEICSICQYGGELVLCDD--CPSSFHKSCLVLNDLPKGNWFCPSCCCRICG 409
+ E++ DE C C GG+LV C CP +H CL L P G W CP C +CG
Sbjct: 1718 AEVMKERE-DE-CFSCGDGGQLVSCKKAGCPKVYHADCLNLTKRPAGKWECPWHQCDMCG 1775
Query: 410 IGKRKFEEKTEHS 422
F E S
Sbjct: 1776 KEAASFCEMCPRS 1788
>UNIPROTKB|F1P4C7 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0002039 "p53 binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0031647 "regulation
of protein stability" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0071391 "cellular response
to estrogen stimulus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISS] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016922 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AADN02006351 EMBL:AADN02006352
IPI:IPI00591737 Ensembl:ENSGALT00000020916 Uniprot:F1P4C7
Length = 928
Score = 136 (52.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 335 QKKILCKNRSSTR------SQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL 388
Q +IL +N +S + S ++ N++ C++CQ GGEL+ C+ CP FH SC
Sbjct: 672 QPRILQENTTSAKMGWLGPSHTGEGRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCH 731
Query: 389 V--LNDLPKGNWFCPSC 403
V L P G W C C
Sbjct: 732 VPSLMSFPSGEWICTFC 748
>UNIPROTKB|F1N972 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00581947
Ensembl:ENSGALT00000004699 OMA:KYYHEEC ArrayExpress:F1N972
Uniprot:F1N972
Length = 2205
Score = 140 (54.3 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 338 ILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGN 397
I+C N + R + E N C +C GG L+ C+ CP++FH+ CL + ++P+G+
Sbjct: 1398 IICPNHFTARR---GCRNHEHVNVSWCFVCSEGGSLLCCESCPAAFHRECLNI-EMPEGS 1453
Query: 398 WFCPSC 403
W+C C
Sbjct: 1454 WYCNDC 1459
Score = 133 (51.9 bits), Expect = 0.00017, P = 0.00017
Identities = 40/133 (30%), Positives = 54/133 (40%)
Query: 292 GIKCDCCSKVFTLSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSSTRSQHD 351
G+ C T++G AG AN + +P L +K K R + +
Sbjct: 1770 GLYLQCFGNRNTVAGNGGMAGG-----CANTLSVPQSQPTLSEEKSKKLKRRPQMKRRSQ 1824
Query: 352 SITSDEKQNDEICSICQYGGELVLCDD--CPSSFHKSCLVLNDLPKGNWFCPSCCCRICG 409
+ E++ DE C C GG+LV C CP +H CL L P G W CP C +CG
Sbjct: 1825 AEVMKERE-DE-CFSCGDGGQLVSCKKAGCPKVYHADCLNLTKRPAGKWECPWHQCDMCG 1882
Query: 410 IGKRKFEEKTEHS 422
F E S
Sbjct: 1883 KEAASFCEMCPRS 1895
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 155 (59.6 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 326 EGGKPLLECQKKILCKNRSSTRSQHDSITSD-----EKQND---EICSICQYGGELVLCD 377
EG C+K+ + S+ + I + E+++D E C +C+ GGEL+ CD
Sbjct: 399 EGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCD 458
Query: 378 DCPSSFHKSCL--VLNDLPKGNWFCPSCCC 405
CPSS+H CL L ++P G W CP C C
Sbjct: 459 TCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 488
Score = 147 (56.8 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 335 QKKI-LCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LN 391
+KK+ K + + ++ E + + C +CQ GGE++LCD CP ++H CL +
Sbjct: 336 RKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDME 395
Query: 392 DLPKGNWFCPSC 403
P+G W CP C
Sbjct: 396 KAPEGKWSCPHC 407
Score = 46 (21.3 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L +W C C + + +IL
Sbjct: 454 LLCCDTCPSSYHIHCLNPP----LPEIPNGEWLCPRCTCPALKGKVQKIL 499
Score = 44 (20.5 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 473 EILDKPFQLGVDDLTWRLLKSMEVRD----HHGPSNSKEMEEALMENQSKLSVALDVMHE 528
++L ++ +DL L K +R + G ++ ++ +NQS SVA + E
Sbjct: 1309 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDE 1368
Query: 529 CFE 531
F+
Sbjct: 1369 DFD 1371
Score = 38 (18.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 72 RELGDSVDDVPSEVSHDK 89
+ELGDS + P V D+
Sbjct: 73 KELGDSSGEGPEFVEEDE 90
>MGI|MGI:109275 [details] [associations]
symbol:Trim24 "tripartite motif-containing 24" species:10090
"Mus musculus" [GO:0002039 "p53 binding" evidence=ISO;IPI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO;IDA] [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI;IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI;IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=ISO;IMP] [GO:0031647 "regulation of
protein stability" evidence=ISO;IMP] [GO:0034056 "estrogen response
element binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0046777 "protein autophosphorylation" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IMP] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IMP] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071391 "cellular response
to estrogen stimulus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
MGI:MGI:109275 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0046777 GO:GO:0006351
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0016922 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 CTD:8805 HOGENOM:HOG000252971 HOVERGEN:HBG054599
KO:K08881 OMA:FWAQNIF OrthoDB:EOG4P8FH9 ChiTaRS:TRIM24 EMBL:S78221
EMBL:S78219 EMBL:BC056959 IPI:IPI00131130 IPI:IPI00227778
PIR:S55259 RefSeq:NP_001258993.1 RefSeq:NP_659542.3
UniGene:Mm.41063 ProteinModelPortal:Q64127 SMR:Q64127
DIP:DIP-31476N IntAct:Q64127 STRING:Q64127 PhosphoSite:Q64127
PaxDb:Q64127 PRIDE:Q64127 Ensembl:ENSMUST00000031859
Ensembl:ENSMUST00000120428 GeneID:21848 KEGG:mmu:21848
UCSC:uc009bjk.1 UCSC:uc009bjl.1 GeneTree:ENSGT00530000062982
InParanoid:Q64127 NextBio:301326 Bgee:Q64127 CleanEx:MM_TRIM24
Genevestigator:Q64127 GermOnline:ENSMUSG00000029833 Uniprot:Q64127
Length = 1051
Score = 136 (52.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 327 GGKPLLECQKKILCKNRSSTRSQHDSI-----TSDEKQNDEICSICQYGGELVLCDDCPS 381
G +P L + K+ S SQ + ++ N++ C++CQ GGEL+ C+ CP
Sbjct: 788 GDQPGLHQENSSNGKSEWSDASQKSPVHVGETRKEDDPNEDWCAVCQNGGELLCCEKCPK 847
Query: 382 SFHKSCLV--LNDLPKGNWFCPSC 403
FH +C V L + P G W C C
Sbjct: 848 VFHLTCHVPTLTNFPSGEWICTFC 871
>UNIPROTKB|E2RNG5 [details] [associations]
symbol:LOC609728 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AAEX03010233
Ensembl:ENSCAFT00000006974 Uniprot:E2RNG5
Length = 1052
Score = 136 (52.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 356 DEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
++ N++ C++CQ GGEL+ C+ CP FH SC V L + P G W C C
Sbjct: 823 EDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFC 872
>UNIPROTKB|F1MP49 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:DAAA02011697 EMBL:DAAA02011696
IPI:IPI01000481 Ensembl:ENSBTAT00000003151 Uniprot:F1MP49
Length = 1053
Score = 136 (52.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 356 DEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
++ N++ C++CQ GGEL+ C+ CP FH SC V L + P G W C C
Sbjct: 824 EDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFC 873
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 137 (53.3 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C +C G + L+LCD C S+H CL+ L D+PKG+W CP C + C + F
Sbjct: 316 VCLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLTDVPKGDWRCPKCLTQECCKPQEAFGF 375
Query: 418 KTEHSVDDVLRICGQCEHNF 437
+ H D L+ G+ +F
Sbjct: 376 EQAHR-DYTLKAFGEMADSF 394
>MGI|MGI:1919027 [details] [associations]
symbol:Ing3 "inhibitor of growth family, member 3"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0032777
"Piccolo NuA4 histone acetyltransferase complex" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0035267 "NuA4 histone acetyltransferase complex" evidence=ISO]
[GO:0040008 "regulation of growth" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043967 "histone H4 acetylation" evidence=ISO] [GO:0043968
"histone H2A acetylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 MGI:MGI:1919027
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0043065 GO:GO:0043968 GO:GO:0043967 GO:GO:0040008
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004402
GO:GO:0032777 InterPro:IPR024610 Pfam:PF12998 eggNOG:COG5034
HOVERGEN:HBG006607 GeneTree:ENSGT00550000074538 CTD:54556
HOGENOM:HOG000239725 KO:K11319 OrthoDB:EOG4H19WB OMA:NNQVDWT
EMBL:AY007791 EMBL:AK080787 EMBL:BC005721 EMBL:BC018342
IPI:IPI00312189 RefSeq:NP_076115.3 UniGene:Mm.39999
ProteinModelPortal:Q8VEK6 SMR:Q8VEK6 IntAct:Q8VEK6 STRING:Q8VEK6
PhosphoSite:Q8VEK6 PRIDE:Q8VEK6 Ensembl:ENSMUST00000031680
GeneID:71777 KEGG:mmu:71777 UCSC:uc009bat.1 InParanoid:Q8VEK6
NextBio:334493 Bgee:Q8VEK6 CleanEx:MM_ING3 Genevestigator:Q8VEK6
GermOnline:ENSMUSG00000029670 Uniprot:Q8VEK6
Length = 421
Score = 130 (50.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 36/119 (30%), Positives = 53/119 (44%)
Query: 299 SKVFTLSGFEAHAGSQKHRPTANIILNEGGKPLL-ECQKKILCKNRSSTRSQHDSITSDE 357
SK T S + + S ++++ L ++ E ++ S + SQ D
Sbjct: 302 SKNNTKSSSQQSSSSSSSSSSSSLSLCSSSSTVVQEVSQQATVVPESDSNSQVDWTYDPN 361
Query: 358 KQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFCPSCCCRICGIGKR 413
+ IC+ YG E+V CD DCP FH C+ L + PKG WFCP C + G R
Sbjct: 362 EPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWFCPQCTAAMKRRGSR 419
>RGD|1310556 [details] [associations]
symbol:Ing3 "inhibitor of growth family, member 3" species:10116
"Rattus norvegicus" [GO:0004402 "histone acetyltransferase
activity" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0032777 "Piccolo NuA4 histone
acetyltransferase complex" evidence=ISO;ISS] [GO:0035064
"methylated histone residue binding" evidence=IEA;ISO] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=ISO;ISS]
[GO:0040008 "regulation of growth" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043967 "histone H4 acetylation" evidence=ISO;ISS] [GO:0043968
"histone H2A acetylation" evidence=ISO;ISS] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
RGD:1310556 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0043065 GO:GO:0043968 GO:GO:0043967 GO:GO:0040008
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:CH473959
GO:GO:0004402 GO:GO:0032777 InterPro:IPR024610 Pfam:PF12998
eggNOG:COG5034 HOVERGEN:HBG006607 GeneTree:ENSGT00550000074538
HSSP:Q9NXR8 CTD:54556 HOGENOM:HOG000239725 KO:K11319
OrthoDB:EOG4H19WB OMA:NNQVDWT EMBL:BC100082 IPI:IPI00373268
RefSeq:NP_001029279.1 UniGene:Rn.52988 ProteinModelPortal:Q498T3
SMR:Q498T3 STRING:Q498T3 PhosphoSite:Q498T3
Ensembl:ENSRNOT00000007476 GeneID:312154 KEGG:rno:312154
UCSC:RGD:1310556 InParanoid:Q498T3 NextBio:664614
Genevestigator:Q498T3 Uniprot:Q498T3
Length = 421
Score = 130 (50.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 36/119 (30%), Positives = 53/119 (44%)
Query: 299 SKVFTLSGFEAHAGSQKHRPTANIILNEGGKPLL-ECQKKILCKNRSSTRSQHDSITSDE 357
SK T S + + S ++++ L ++ E ++ S + SQ D
Sbjct: 302 SKNNTKSSSQQSSSSSSSSSSSSLSLCSSSSTVVQEVSQQTTVVPESDSNSQVDWTYDPN 361
Query: 358 KQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFCPSCCCRICGIGKR 413
+ IC+ YG E+V CD DCP FH C+ L + PKG WFCP C + G R
Sbjct: 362 EPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWFCPQCTAAMKRRGSR 419
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 148 (57.2 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 328 GKPLLECQKKIL-CKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKS 386
G+P + +KK+L C T + + + E + + C +CQ GGE++LCD CP ++H
Sbjct: 307 GRPGRK-KKKVLGCP----TVTGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLV 361
Query: 387 CL--VLNDLPKGNWFCPSC 403
CL L+ P+G W CP C
Sbjct: 362 CLDPELDRAPEGKWSCPHC 380
Score = 148 (57.2 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 357 EKQND--EICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRI 407
E+++D E C +C+ GGEL+ CD C SS+H CL L D+P G W CP C C +
Sbjct: 406 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPV 460
Score = 49 (22.3 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L + +W C C V+ + +IL
Sbjct: 424 LLCCDACISSYHIHCLNPP----LPDIPNGEWLCPRCTCPVLKGRVQKIL 469
Score = 39 (18.8 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 590 LMNELEKLLIELGVERLVLPA 610
++N+LE+LL ++ + LPA
Sbjct: 1787 VLNQLEELLSDMKADVTRLPA 1807
>UNIPROTKB|G3V7V1 [details] [associations]
symbol:Ing1 "RCG43037" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010941 "regulation of cell death" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 RGD:1306330 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:CH473970 GeneTree:ENSGT00550000074538
Ensembl:ENSRNOT00000019454 Uniprot:G3V7V1
Length = 185
Score = 120 (47.3 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 328 GKPLLECQKKILCKNRSSTRSQHDSITSDEK--QNDEICSIC-QYG-GELVLCD--DCPS 381
G P + K K RS +++ ++ +D N+ +C Q GE++ CD +CP
Sbjct: 80 GTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPI 139
Query: 382 S-FHKSCLVLNDLPKGNWFCPSC 403
FH SC+ LN PKG W+CP C
Sbjct: 140 EWFHFSCVGLNHKPKGKWYCPKC 162
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 148 (57.2 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 328 GKPLLECQKKIL-CKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKS 386
G+P + +KK+L C T + + + E + + C +CQ GGE++LCD CP ++H
Sbjct: 402 GRPGRK-KKKVLGCP----TVTGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLV 456
Query: 387 CL--VLNDLPKGNWFCPSC 403
CL L+ P+G W CP C
Sbjct: 457 CLDPELDRAPEGKWSCPHC 475
Score = 148 (57.2 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 357 EKQND--EICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRI 407
E+++D E C +C+ GGEL+ CD C SS+H CL L D+P G W CP C C +
Sbjct: 501 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPV 555
Score = 49 (22.3 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L + +W C C V+ + +IL
Sbjct: 519 LLCCDACISSYHIHCLNPP----LPDIPNGEWLCPRCTCPVLKGRVQKIL 564
Score = 39 (18.8 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 590 LMNELEKLLIELGVERLVLPA 610
++N+LE+LL ++ + LPA
Sbjct: 1882 VLNQLEELLSDMKADVTRLPA 1902
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 148 (57.2 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 328 GKPLLECQKKIL-CKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKS 386
G+P + +KK+L C T + + + E + + C +CQ GGE++LCD CP ++H
Sbjct: 402 GRPGRK-KKKVLGCP----TVTGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLV 456
Query: 387 CL--VLNDLPKGNWFCPSC 403
CL L+ P+G W CP C
Sbjct: 457 CLDPELDRAPEGKWSCPHC 475
Score = 148 (57.2 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 357 EKQND--EICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRI 407
E+++D E C +C+ GGEL+ CD C SS+H CL L D+P G W CP C C +
Sbjct: 501 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPV 555
Score = 49 (22.3 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L + +W C C V+ + +IL
Sbjct: 519 LLCCDACISSYHIHCLNPP----LPDIPNGEWLCPRCTCPVLKGRVQKIL 564
Score = 39 (18.8 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 590 LMNELEKLLIELGVERLVLPA 610
++N+LE+LL ++ + LPA
Sbjct: 1916 VLNQLEELLSDMKADVTRLPA 1936
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 148 (57.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 53/188 (28%), Positives = 81/188 (43%)
Query: 335 QKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLN--D 392
+K L R+S R++ + +E + E C +C GEL+LCD C ++H +C+ N
Sbjct: 240 RKAALESARASKRARKEQGVVEEN-HQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQ 298
Query: 393 LPKGNWFCPSCCCRICGIGKRKFEEKTEHSVDDVLRICGQ---------CEHNFHVGCIE 443
P+G+W CP C G EE+ + D RIC + C ++H CI+
Sbjct: 299 PPEGDWSCPHC--EEHGPDVLIVEEEPAKANMDYCRICKETSNILLCDTCPSSYHAYCID 356
Query: 444 KSRAINLNNCSQNKWFCSDGCEVISSCLHEILDKPFQLGVDDLTWRLLKSMEVRDHHGPS 503
L + +W C C I+ +P Q L+WR E+ + P
Sbjct: 357 PP----LTEIPEGEWSCP-------RC---IIPEPAQRIEKILSWRW---KEI-SYPEPL 398
Query: 504 NSKEMEEA 511
KE EEA
Sbjct: 399 ECKEGEEA 406
Score = 40 (19.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 525 VMHECFEPIKDVLTERDLVEDV 546
++H+C + D+L+ DL DV
Sbjct: 1640 ILHKCLAQLDDLLS--DLKTDV 1659
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 148 (57.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 53/188 (28%), Positives = 81/188 (43%)
Query: 335 QKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLN--D 392
+K L R+S R++ + +E + E C +C GEL+LCD C ++H +C+ N
Sbjct: 240 RKAALESARASKRARKEQGVVEEN-HQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQ 298
Query: 393 LPKGNWFCPSCCCRICGIGKRKFEEKTEHSVDDVLRICGQ---------CEHNFHVGCIE 443
P+G+W CP C G EE+ + D RIC + C ++H CI+
Sbjct: 299 PPEGDWSCPHC--EEHGPDVLIVEEEPAKANMDYCRICKETSNILLCDTCPSSYHAYCID 356
Query: 444 KSRAINLNNCSQNKWFCSDGCEVISSCLHEILDKPFQLGVDDLTWRLLKSMEVRDHHGPS 503
L + +W C C I+ +P Q L+WR E+ + P
Sbjct: 357 PP----LTEIPEGEWSCP-------RC---IIPEPAQRIEKILSWRW---KEI-SYPEPL 398
Query: 504 NSKEMEEA 511
KE EEA
Sbjct: 399 ECKEGEEA 406
Score = 40 (19.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 525 VMHECFEPIKDVLTERDLVEDV 546
++H+C + D+L+ DL DV
Sbjct: 1640 ILHKCLAQLDDLLS--DLKTDV 1659
>UNIPROTKB|F1NP02 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 EMBL:AADN02033506
EMBL:AADN02033505 IPI:IPI00680686 Ensembl:ENSGALT00000030514
ArrayExpress:F1NP02 Uniprot:F1NP02
Length = 603
Score = 131 (51.2 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 354 TSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
++D +++ CS+C+ G+L++CD C +H CL L +PKG W CP C
Sbjct: 405 STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKC 456
>ZFIN|ZDB-GENE-030131-2773 [details] [associations]
symbol:trim33 "tripartite motif-containing 33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0033333
"fin development" evidence=IMP] [GO:0030218 "erythrocyte
differentiation" evidence=IGI;IMP] [GO:0034243 "regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0035162 "embryonic hemopoiesis" evidence=IMP]
[GO:0035166 "post-embryonic hemopoiesis" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 ZFIN:ZDB-GENE-030131-2773
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 GO:GO:0030218
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0034243
GO:GO:0035166 GO:GO:0060215 HOGENOM:HOG000252971 HOVERGEN:HBG054599
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 GO:GO:0033333
EMBL:BX321886 IPI:IPI00512685 RefSeq:NP_001002871.2
UniGene:Dr.80165 SMR:B0S5U2 Ensembl:ENSDART00000020116
GeneID:324053 KEGG:dre:324053 NextBio:20808565 Uniprot:B0S5U2
Length = 1176
Score = 139 (54.0 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 343 RSSTRSQHDSITS--DEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNW 398
R T + + T+ ++ N++ C++CQ GGEL+ CD CP FH +C + L P G+W
Sbjct: 914 RGGTTNANSQTTAGKEDDPNEDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDW 973
Query: 399 FCPSC 403
C C
Sbjct: 974 MCTFC 978
Score = 45 (20.9 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 118 RDMLLKAKMHLLSLGWSFWYTTKGNRRELRYTSPSGAVYISLRTACKACMDEGLDSKGMV 177
RD+ + A+ + L ++ W T G+ L Y+ + LR KA +D + G V
Sbjct: 419 RDISVLAQQIIHVLNFTNWAITNGSSTALLYSKR--LITYQLRLIMKARVDAVPPANGAV 476
>UNIPROTKB|E1C765 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0060348 "bone
development" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AADN02014946 IPI:IPI00588925 Ensembl:ENSGALT00000025327
Uniprot:E1C765
Length = 1372
Score = 123 (48.4 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSSFHKSCLVLNDLPK--G 396
K + TR + +K++++ C C GG+LVLCD C ++H SCL L P G
Sbjct: 1226 KTKKRTRRRRTK-NEGKKESEDDCFRCGDGGQLVLCDRKSCTKAYHLSCLDLAKRPFVIG 1284
Query: 397 NWFCPSCCCRICG 409
W CP C +CG
Sbjct: 1285 KWECPWHHCDVCG 1297
Score = 117 (46.2 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 364 CSIC-QYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
C +C + GG L+ C+ CP++FH CL + ++P G+W+C C
Sbjct: 839 CFVCSKEGGSLLCCESCPAAFHPDCLNI-EMPDGSWYCNDC 878
Score = 117 (46.2 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCDD-CPSSFHKSCLVLNDLPKGNWFCPS 402
SS +S+ + T E +C +C+ G+L+LC+ C +FH SCL L+ P G + C
Sbjct: 659 SSKKSERGTGTKKEY----VCQLCEKTGDLLLCEGLCYRAFHVSCLGLSGRPAGKFVCSE 714
Query: 403 CCCRI--CGIGKRKFEEKTEHSVDDVLR-ICGQCEHNFHVGCIEK 444
C + C + K E K D+ R + C +H C++K
Sbjct: 715 CTSGVHTCFVCK---ERKA-----DLKRCVVSHCGKFYHEACVKK 751
Score = 71 (30.1 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 26/108 (24%), Positives = 46/108 (42%)
Query: 14 EVIRKYLSIKGTQHPALIVNVRRHLKHLGWTIEYSSSKGVFRYTSPNGNPYLSLSQVCRE 73
E I+ + G P + V++ + +G T+E +K F Y P+L+ QV +E
Sbjct: 307 EKIKMLKPVPGKLRPQWEMGVKQASEAVGMTVEERKAKYTFIYI--RDRPHLN-PQVAKE 363
Query: 74 LGDSVDDVPSEVSHDKVVNIPPQHCPEAVVFWYEHGLEKKNKSNRDML 121
+G +V+ + EV N + E + E G+ K + L
Sbjct: 364 VGIAVELLEEEVDESSYSN---EETSENLKSMKESGIPNKRRRRTSKL 408
Score = 37 (18.1 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 226 QDDQKRTAVLRSSKRARSPERFASPSNCK 254
Q + K T +SS++A S SP + K
Sbjct: 419 QLETKNTTPQKSSEQAESKRGIGSPLSRK 447
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 148 (57.2 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 357 EKQND--EICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRI 407
E+++D E C +C+ GGEL+ CD C SS+H CL L D+P G W CP C C +
Sbjct: 448 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPV 502
Score = 147 (56.8 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 328 GKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSC 387
G+P + +K + C T + + + E + + C +CQ GGE++LCD CP ++H C
Sbjct: 349 GRPGRKKRKVLGCP----TVAGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVC 404
Query: 388 L--VLNDLPKGNWFCPSC 403
L L+ P+G W CP C
Sbjct: 405 LDPELDRAPEGKWSCPHC 422
Score = 49 (22.3 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L + +W C C V+ + +IL
Sbjct: 466 LLCCDACISSYHIHCLNPP----LPDIPNGEWLCPRCTCPVLKGRVQKIL 511
Score = 39 (18.8 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 590 LMNELEKLLIELGVERLVLPA 610
++N+LE+LL ++ + LPA
Sbjct: 1862 VLNQLEELLSDMKADVTRLPA 1882
>UNIPROTKB|F1P5P6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0000118
GeneTree:ENSGT00530000063984 EMBL:AADN02033506 EMBL:AADN02033505
IPI:IPI00574652 Ensembl:ENSGALT00000013689 ArrayExpress:F1P5P6
Uniprot:F1P5P6
Length = 651
Score = 131 (51.2 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 354 TSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
++D +++ CS+C+ G+L++CD C +H CL L +PKG W CP C
Sbjct: 453 STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKC 504
>UNIPROTKB|I3LDB0 [details] [associations]
symbol:I3LDB0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:FP101987
Ensembl:ENSSSCT00000023373 Uniprot:I3LDB0
Length = 563
Score = 130 (50.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 354 TSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
++D +++ CS+C+ G+L++CD C +H CL L +PKG W CP C
Sbjct: 361 STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 412
>UNIPROTKB|F1M5S0 [details] [associations]
symbol:RGD1560612 "Protein RGD1560612" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 IPI:IPI00947688
Ensembl:ENSRNOT00000066219 ArrayExpress:F1M5S0 Uniprot:F1M5S0
Length = 573
Score = 130 (50.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 354 TSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
++D +++ CS+C+ G+L++CD C +H CL L +PKG W CP C
Sbjct: 375 STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 426
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 134 (52.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C +C G + L+LCD C S+H CL+ L+D+PKG+W CP C + C + F
Sbjct: 153 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 212
Query: 418 KTEHSVDDVLRICGQCEHNF 437
+ + + D LR G+ F
Sbjct: 213 E-QAARDYTLRTFGEMADAF 231
>UNIPROTKB|D4AB82 [details] [associations]
symbol:Trim24 "Protein Trim24" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1560596
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0045893
GO:GO:0008285 GO:GO:0042981 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0046777 GO:GO:0003682 GO:GO:0004672
GO:GO:0031647 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056
GO:GO:0070562 GO:GO:0005726 OrthoDB:EOG4P8FH9 IPI:IPI00566577
Ensembl:ENSRNOT00000017848 ArrayExpress:D4AB82 Uniprot:D4AB82
Length = 1048
Score = 133 (51.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 356 DEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
++ N++ C++CQ GGEL+ C+ CP FH +C V L P G W C C
Sbjct: 820 EDDPNEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTHFPSGEWICTFC 869
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 134 (52.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C +C G + L+LCD C S+H CL+ L+D+PKG+W CP C + C + F
Sbjct: 310 VCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 369
Query: 418 KTEHSVDDVLRICGQCEHNF 437
+ + + D LR G+ F
Sbjct: 370 E-QAARDYTLRTFGEMADAF 388
>UNIPROTKB|J9NUG7 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002459
Ensembl:ENSCAFT00000043831 Uniprot:J9NUG7
Length = 1359
Score = 134 (52.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 42/144 (29%), Positives = 68/144 (47%)
Query: 313 SQKHRPTANIILNE-----GGKPL---LECQKKILCKNRSSTRSQHDSITSDEKQNDEIC 364
S+ P+A++ NE G +PL E + + S++ +T+ + + +C
Sbjct: 608 SKSSSPSASLTENEVSDGPGDEPLESPYESADETQTEVSISSKKSERGVTA---KKEYVC 664
Query: 365 SICQYGGELVLCDD-CPSSFHKSCLVLNDLPKGNWFCPSCCCRI--CGIGKRKFEEKTEH 421
+C+ G LVLC+ C +FH +CL L+ P+G + C C I C + K E KT
Sbjct: 665 QLCEKTGSLVLCEGPCCGAFHLACLGLSRRPEGRFTCSECASGIHSCFVCK---ESKT-- 719
Query: 422 SVDDVLR-ICGQCEHNFHVGCIEK 444
DV R + QC +H C+ K
Sbjct: 720 ---DVKRCVVSQCGKFYHEACVRK 740
Score = 133 (51.9 bits), Expect = 0.00010, P = 0.00010
Identities = 28/71 (39%), Positives = 36/71 (50%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSSFHKSCLVLNDLPKGNW 398
K + TR + ++ DE C C GG+LVLCD C ++H SCL L P G W
Sbjct: 1214 KTKKRTRRRRTRGEGKKESEDE-CFRCGDGGQLVLCDRKSCTKAYHLSCLGLGKRPFGKW 1272
Query: 399 FCPSCCCRICG 409
CP C +CG
Sbjct: 1273 ECPWHHCDVCG 1283
Score = 132 (51.5 bits), Expect = 0.00013, P = 0.00013
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 364 CSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
C +C GG L+ C+ CP++FH CL + D+P G+WFC C
Sbjct: 828 CFVCSKGGSLLCCESCPAAFHPDCLNI-DMPDGSWFCNDC 866
>UNIPROTKB|F1PK46 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AAEX03002459 Ensembl:ENSCAFT00000023738 Uniprot:F1PK46
Length = 1362
Score = 134 (52.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 42/144 (29%), Positives = 68/144 (47%)
Query: 313 SQKHRPTANIILNE-----GGKPL---LECQKKILCKNRSSTRSQHDSITSDEKQNDEIC 364
S+ P+A++ NE G +PL E + + S++ +T+ + + +C
Sbjct: 611 SKSSSPSASLTENEVSDGPGDEPLESPYESADETQTEVSISSKKSERGVTA---KKEYVC 667
Query: 365 SICQYGGELVLCDD-CPSSFHKSCLVLNDLPKGNWFCPSCCCRI--CGIGKRKFEEKTEH 421
+C+ G LVLC+ C +FH +CL L+ P+G + C C I C + K E KT
Sbjct: 668 QLCEKTGSLVLCEGPCCGAFHLACLGLSRRPEGRFTCSECASGIHSCFVCK---ESKT-- 722
Query: 422 SVDDVLR-ICGQCEHNFHVGCIEK 444
DV R + QC +H C+ K
Sbjct: 723 ---DVKRCVVSQCGKFYHEACVRK 743
Score = 133 (51.9 bits), Expect = 0.00010, P = 0.00010
Identities = 28/71 (39%), Positives = 36/71 (50%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSSFHKSCLVLNDLPKGNW 398
K + TR + ++ DE C C GG+LVLCD C ++H SCL L P G W
Sbjct: 1217 KTKKRTRRRRTRGEGKKESEDE-CFRCGDGGQLVLCDRKSCTKAYHLSCLGLGKRPFGKW 1275
Query: 399 FCPSCCCRICG 409
CP C +CG
Sbjct: 1276 ECPWHHCDVCG 1286
Score = 132 (51.5 bits), Expect = 0.00013, P = 0.00013
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 364 CSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
C +C GG L+ C+ CP++FH CL + D+P G+WFC C
Sbjct: 831 CFVCSKGGSLLCCESCPAAFHPDCLNI-DMPDGSWFCNDC 869
>ZFIN|ZDB-GENE-091204-206 [details] [associations]
symbol:si:dkey-21n12.3 "si:dkey-21n12.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 SMART:SM00384 ZFIN:ZDB-GENE-091204-206 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR018501 PROSITE:PS50827 EMBL:AL929053
GeneTree:ENSGT00530000064411 IPI:IPI00497346
Ensembl:ENSDART00000077161 Bgee:F1Q6Y6 Uniprot:F1Q6Y6
Length = 1369
Score = 134 (52.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 30/71 (42%), Positives = 38/71 (53%)
Query: 341 KNRSSTRSQHDSITS---DEKQNDEICSICQYGG--ELVL-CDDCPSSFHKSCL--VLND 392
+NR+ R DS TS D+ ND+ C C EL+L CD C S +H +CL L
Sbjct: 830 RNRNRERRSSDSSTSSSEDDTPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMI 889
Query: 393 LPKGNWFCPSC 403
+P G WFCP C
Sbjct: 890 IPDGEWFCPPC 900
>UNIPROTKB|F1MS13 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0001967
GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:DAAA02041566 EMBL:DAAA02041567
IPI:IPI00716921 Ensembl:ENSBTAT00000012652 Uniprot:F1MS13
Length = 631
Score = 130 (50.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 354 TSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
++D +++ CS+C+ G+L++CD C +H CL L +PKG W CP C
Sbjct: 429 STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 480
>RGD|1560612 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001967
"suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
RGD:1560612 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000063984 IPI:IPI00952132
Ensembl:ENSRNOT00000067664 UCSC:RGD:1560612 ArrayExpress:F1M6K4
Uniprot:F1M6K4
Length = 639
Score = 130 (50.8 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 354 TSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
++D +++ CS+C+ G+L++CD C +H CL L +PKG W CP C
Sbjct: 441 STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 492
>MGI|MGI:2384756 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001967 "suckling
behavior" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 MGI:MGI:2384756 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001967 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 CTD:51317
eggNOG:NOG310379 HOVERGEN:HBG080293 EMBL:AB105178 EMBL:AK129424
EMBL:AK037174 EMBL:BC019181 EMBL:AY206982 IPI:IPI00124469
IPI:IPI00228265 IPI:IPI00453806 IPI:IPI00742280 IPI:IPI00742299
IPI:IPI00742330 IPI:IPI00742344 IPI:IPI00742352 IPI:IPI00742439
RefSeq:NP_001103161.1 RefSeq:NP_620094.2 UniGene:Mm.330408
ProteinModelPortal:Q6ZPK0 SMR:Q6ZPK0 STRING:Q6ZPK0
PhosphoSite:Q6ZPK0 PRIDE:Q6ZPK0 GeneID:192285 KEGG:mmu:192285
UCSC:uc008kxi.2 HOGENOM:HOG000231466 ChiTaRS:PHF21A NextBio:371282
CleanEx:MM_PHF21A Genevestigator:Q6ZPK0
GermOnline:ENSMUSG00000058318 Uniprot:Q6ZPK0
Length = 659
Score = 130 (50.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 354 TSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
++D +++ CS+C+ G+L++CD C +H CL L +PKG W CP C
Sbjct: 461 STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 512
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 134 (52.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C +C G + L+LCD C S+H CL+ L+D+PKG+W CP C + C + F
Sbjct: 243 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 302
Query: 418 KTEHSVDDVLRICGQCEHNF 437
+ + + D LR G+ F
Sbjct: 303 E-QAARDYTLRTFGEMADAF 321
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 134 (52.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C +C G + L+LCD C S+H CL+ L+D+PKG+W CP C + C + F
Sbjct: 251 VCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 310
Query: 418 KTEHSVDDVLRICGQCEHNF 437
+ + + D LR G+ F
Sbjct: 311 E-QAARDYTLRTFGEMADAF 329
>ZFIN|ZDB-GENE-030131-3876 [details] [associations]
symbol:phf12a "PHD finger protein 12a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-030131-3876 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00440000033777
EMBL:CU694807 IPI:IPI00897047 RefSeq:XP_001919955.3
UniGene:Dr.79049 Ensembl:ENSDART00000111104 GeneID:562152
KEGG:dre:562152 CTD:562152 NextBio:20884273 Uniprot:E7EXI6
Length = 941
Score = 143 (55.4 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 33/84 (39%), Positives = 42/84 (50%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSC----LVLNDLPKG 396
KNR RS S N +IC C+ GG+L+ CD CP++FH C L LP G
Sbjct: 39 KNRKPDRSTR---RSGRATNHDICDSCREGGDLLCCDHCPAAFHLQCCNPPLSREMLPSG 95
Query: 397 NWFCPSCCCRICGIGKRKFEEKTE 420
+W C C R K+K E+K E
Sbjct: 96 DWMCHRCTVR-----KKKREQKKE 114
Score = 37 (18.1 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFC 460
C C FH+ C++ L +W C
Sbjct: 300 CDFCPLLFHMDCLDPP----LTAFPTGRWMC 326
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 148 (57.2 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 357 EKQND--EICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRI 407
E+++D E C +C+ GGEL+ CD C SS+H CL L D+P G W CP C C +
Sbjct: 446 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPV 500
Score = 145 (56.1 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 351 DSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+ I E + + C +CQ GGE++LCD CP ++H CL L+ P+G W CP C
Sbjct: 365 EEIDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 419
Score = 49 (22.3 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L + +W C C V+ + +IL
Sbjct: 464 LLCCDACISSYHIHCLNPP----LPDIPNGEWLCPRCTCPVLKGRVQKIL 509
Score = 39 (18.8 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 590 LMNELEKLLIELGVERLVLPA 610
++N+LE+LL ++ + LPA
Sbjct: 1862 VLNQLEELLSDMKADVTRLPA 1882
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 148 (57.2 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 357 EKQND--EICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRI 407
E+++D E C +C+ GGEL+ CD C SS+H CL L D+P G W CP C C +
Sbjct: 450 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPV 504
Score = 144 (55.7 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 351 DSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+ + E + + C +CQ GGE++LCD CP ++H CL L+ P+G W CP C
Sbjct: 369 EEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
Score = 49 (22.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L + +W C C V+ + +IL
Sbjct: 468 LLCCDACISSYHIHCLNPP----LPDIPNGEWLCPRCTCPVLKGRVQKIL 513
Score = 39 (18.8 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 590 LMNELEKLLIELGVERLVLPA 610
++N+LE+LL ++ + LPA
Sbjct: 1864 VLNQLEELLSDMKADVTRLPA 1884
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 148 (57.2 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 357 EKQND--EICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRI 407
E+++D E C +C+ GGEL+ CD C SS+H CL L D+P G W CP C C +
Sbjct: 450 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPV 504
Score = 144 (55.7 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 351 DSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+ + E + + C +CQ GGE++LCD CP ++H CL L+ P+G W CP C
Sbjct: 369 EEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
Score = 49 (22.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L + +W C C V+ + +IL
Sbjct: 468 LLCCDACISSYHIHCLNPP----LPDIPNGEWLCPRCTCPVLKGRVQKIL 513
Score = 39 (18.8 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 590 LMNELEKLLIELGVERLVLPA 610
++N+LE+LL ++ + LPA
Sbjct: 1866 VLNQLEELLSDMKADVTRLPA 1886
>UNIPROTKB|F1PQV6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:SCTVNCN GeneTree:ENSGT00530000063984
EMBL:AAEX03011503 EMBL:AAEX03011502 Ensembl:ENSCAFT00000014853
Uniprot:F1PQV6
Length = 680
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 354 TSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
++D +++ CS+C+ G+L++CD C +H CL L +PKG W CP C
Sbjct: 481 STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
>UNIPROTKB|Q96BD5 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] Reactome:REACT_604
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 SMART:SM00384 EMBL:CH471064
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0007596
GO:GO:0008270 GO:GO:0001967 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 EMBL:AY090777 EMBL:AB051483
EMBL:AK021530 EMBL:AK023258 EMBL:BC015714 EMBL:BX648236
EMBL:AF208848 IPI:IPI00041959 IPI:IPI00054460 IPI:IPI00737174
RefSeq:NP_001095272.1 RefSeq:NP_057705.3 UniGene:Hs.502458 PDB:2PUY
PDB:2YQL PDBsum:2PUY PDBsum:2YQL ProteinModelPortal:Q96BD5
SMR:Q96BD5 IntAct:Q96BD5 MINT:MINT-1469147 STRING:Q96BD5
PhosphoSite:Q96BD5 DMDM:74731224 PaxDb:Q96BD5 PRIDE:Q96BD5
DNASU:51317 Ensembl:ENST00000257821 Ensembl:ENST00000323180
Ensembl:ENST00000418153 GeneID:51317 KEGG:hsa:51317 UCSC:uc001ncb.4
UCSC:uc001ncc.4 UCSC:uc001nce.2 CTD:51317 GeneCards:GC11M045950
HGNC:HGNC:24156 HPA:HPA023580 MIM:608325 neXtProt:NX_Q96BD5
PharmGKB:PA134977844 eggNOG:NOG310379 HOVERGEN:HBG080293
InParanoid:Q96BD5 OMA:SCTVNCN OrthoDB:EOG4KWJSH PhylomeDB:Q96BD5
EvolutionaryTrace:Q96BD5 GenomeRNAi:51317 NextBio:54681
ArrayExpress:Q96BD5 Bgee:Q96BD5 CleanEx:HS_PHF21A
Genevestigator:Q96BD5 GermOnline:ENSG00000135365 Uniprot:Q96BD5
Length = 680
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 354 TSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
++D +++ CS+C+ G+L++CD C +H CL L +PKG W CP C
Sbjct: 481 STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 134 (52.2 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C +C G + L+LCD C S+H CL+ L+D+PKG+W CP C + C + F
Sbjct: 311 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 370
Query: 418 KTEHSVDDVLRICGQCEHNF 437
+ + + D LR G+ F
Sbjct: 371 E-QAARDYTLRTFGEMADAF 389
>UNIPROTKB|Q7ZX31 [details] [associations]
symbol:ing3 "Inhibitor of growth protein 3" species:8355
"Xenopus laevis" [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043967 "histone H4 acetylation"
evidence=ISS] [GO:0043968 "histone H2A acetylation" evidence=ISS]
[GO:0004402 "histone acetyltransferase activity" evidence=ISS]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0043065 GO:GO:0043968
GO:GO:0043967 GO:GO:0040008 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR024610 Pfam:PF12998 HOVERGEN:HBG006607
HSSP:Q9NXR8 CTD:54556 KO:K11319 EMBL:BC045263 RefSeq:NP_001080280.1
UniGene:Xl.4898 ProteinModelPortal:Q7ZX31 SMR:Q7ZX31 GeneID:379972
KEGG:xla:379972 Xenbase:XB-GENE-972311 Uniprot:Q7ZX31
Length = 416
Score = 127 (49.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 29/73 (39%), Positives = 37/73 (50%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFC 400
S T SQ D + IC+ YG E+V CD DCP FH C+ L++ PKG W+C
Sbjct: 343 SDTNSQVDWTYDPNEPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLSEAPKGKWYC 401
Query: 401 PSCCCRICGIGKR 413
P C + G R
Sbjct: 402 PQCTAAMKRRGSR 414
>UNIPROTKB|Q66KD5 [details] [associations]
symbol:ing3 "Inhibitor of growth protein 3" species:8364
"Xenopus (Silurana) tropicalis" [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0043967 "histone H4
acetylation" evidence=ISS] [GO:0043968 "histone H2A acetylation"
evidence=ISS] [GO:0004402 "histone acetyltransferase activity"
evidence=ISS] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0043065
GO:GO:0043968 GO:GO:0043967 GO:GO:0040008 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR024610 Pfam:PF12998
HOVERGEN:HBG006607 HSSP:Q9NXR8 CTD:54556 KO:K11319 EMBL:CR848341
EMBL:BC080450 RefSeq:NP_001008672.1 UniGene:Str.57251
ProteinModelPortal:Q66KD5 SMR:Q66KD5 GeneID:493319 KEGG:xtr:493319
Xenbase:XB-GENE-972305 Uniprot:Q66KD5
Length = 417
Score = 127 (49.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 29/73 (39%), Positives = 37/73 (50%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFC 400
S T SQ D + IC+ YG E+V CD DCP FH C+ L++ PKG W+C
Sbjct: 344 SDTNSQVDWTYDPNEPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLSEAPKGKWYC 402
Query: 401 PSCCCRICGIGKR 413
P C + G R
Sbjct: 403 PQCTAAMKRRGSR 415
>UNIPROTKB|E9PTL0 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
IPI:IPI00769023 Ensembl:ENSRNOT00000055139 RGD:1309544
ArrayExpress:E9PTL0 Uniprot:E9PTL0
Length = 1073
Score = 132 (51.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 351 DSITSDEK-QNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+S + D+ +ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 52 NSSSKDQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 105
>UNIPROTKB|H7C4X9 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540
EMBL:AL031666 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:H7C4X9 PRIDE:H7C4X9
Ensembl:ENST00000467200 Uniprot:H7C4X9
Length = 1096
Score = 132 (51.5 bits), Expect = 0.00010, P = 0.00010
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 353 ITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ + +ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 7 VVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 57
>ZFIN|ZDB-GENE-080519-2 [details] [associations]
symbol:nsd1b "nuclear receptor binding SET domain
protein 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
ZFIN:ZDB-GENE-080519-2 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
GO:GO:0034968 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:BX842703 IPI:IPI00488658
Ensembl:ENSDART00000131188 Bgee:F1Q9U9 Uniprot:F1Q9U9
Length = 1873
Score = 143 (55.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 338 ILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGN 397
I+C N + R + E N C +C GG L+ C+ CP++FH+ CL + D+P+G+
Sbjct: 1240 IVCPNHFTPRK---GCRNHEHVNVSWCFVCSEGGSLLCCESCPAAFHRECLNI-DMPEGS 1295
Query: 398 WFCPSC 403
W+C C
Sbjct: 1296 WYCNDC 1301
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 88 DKVVNIPPQHCPEAVVFWYEHGLEKKNKSNRDM 120
D V I Q C E V Y+ +K + +D+
Sbjct: 849 DSVTKIENQKCSEPVAKTYDEVKQKPQVTEQDV 881
Score = 41 (19.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 171 LDSKGMVSCNKSPSATTSTKH 191
L++K VS SPS TS H
Sbjct: 486 LETKNCVSSFDSPSLETSDVH 506
>UNIPROTKB|Q9ULU4 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070491 "repressing
transcription factor binding" evidence=ISS] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 EMBL:U48251 Pfam:PF00855 GO:GO:0005634 EMBL:CH471077
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 InterPro:IPR000313 PROSITE:PS50812 GO:GO:0070491
EMBL:AL049540 EMBL:AL022342 EMBL:AF233453 EMBL:AF454056
EMBL:AF273045 EMBL:DQ082998 EMBL:DQ082999 EMBL:DQ368673
EMBL:DQ368674 EMBL:DQ368679 EMBL:DQ368669 EMBL:DQ368670
EMBL:DQ368671 EMBL:AB032951 EMBL:AK299899 EMBL:BX641005
EMBL:AL031666 EMBL:BC030721 IPI:IPI00385321 IPI:IPI00418316
IPI:IPI00640598 IPI:IPI00718938 IPI:IPI00719508 IPI:IPI00741204
IPI:IPI00789719 IPI:IPI00941061 IPI:IPI00946867 IPI:IPI01008745
IPI:IPI01008942 IPI:IPI01008945 IPI:IPI01008959 IPI:IPI01014325
RefSeq:NP_036540.3 RefSeq:NP_898868.1 RefSeq:NP_898869.1
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
ProteinModelPortal:Q9ULU4 SMR:Q9ULU4 IntAct:Q9ULU4
MINT:MINT-1183677 STRING:Q9ULU4 PhosphoSite:Q9ULU4 DMDM:25453223
PaxDb:Q9ULU4 PRIDE:Q9ULU4 Ensembl:ENST00000311275
Ensembl:ENST00000352431 Ensembl:ENST00000355972
Ensembl:ENST00000360911 Ensembl:ENST00000461685 GeneID:23613
KEGG:hsa:23613 UCSC:uc002xsu.1 UCSC:uc002xsw.1 UCSC:uc002xsx.1
UCSC:uc002xta.1 UCSC:uc002xtb.1 UCSC:uc002xtc.1 UCSC:uc002xtd.1
UCSC:uc002xte.1 UCSC:uc002xtf.1 UCSC:uc010zya.1 CTD:23613
GeneCards:GC20M045837 H-InvDB:HIX0015888 HGNC:HGNC:9397
HPA:HPA020949 neXtProt:NX_Q9ULU4 PharmGKB:PA162409890
HOVERGEN:HBG031823 GenomeRNAi:23613 NextBio:46322
ArrayExpress:Q9ULU4 Bgee:Q9ULU4 CleanEx:HS_ZMYND8
Genevestigator:Q9ULU4 GermOnline:ENSG00000101040 InterPro:IPR021931
Pfam:PF12064 Uniprot:Q9ULU4
Length = 1186
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 353 ITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ + +ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 80 VVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 130
>UNIPROTKB|F1MY77 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:DAAA02036805
IPI:IPI00727342 UniGene:Bt.52435 Ensembl:ENSBTAT00000004258
NextBio:20867417 Uniprot:F1MY77
Length = 1193
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 353 ITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ + +ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 100 VVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 150
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 145 (56.1 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 356 DEKQNDEICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICG 409
D + IC +C GG+ L+LCD C S+H CL+ L+D+PKG+W CP C + CG
Sbjct: 272 DPQVEQYICLVCGGGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECG 330
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 590 LMNELEKLLIELGVERLVLPAVPGVVDTWTNKFGFSK 626
L ELE+LL+E + ++ LP + + + N+F S+
Sbjct: 1297 LSAELEELLVEGLLLQVTLPELQQLYSSLINRFSPSQ 1333
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFC 460
C C +H GC+ + I + W C
Sbjct: 1158 CELCRDAYHSGCVPGFKDIQIGQ----PWLC 1184
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 93 IPPQHCPEAVVFWYE 107
IPP CP W E
Sbjct: 3 IPPPECPVFEPSWEE 17
>UNIPROTKB|F1M0S9 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
RGD:1309544 IPI:IPI00949507 Ensembl:ENSRNOT00000065165
ArrayExpress:F1M0S9 Uniprot:F1M0S9
Length = 1226
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 353 ITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ + +ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 77 VVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 127
>UNIPROTKB|F5H0X3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
IPI:IPI00418316 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:F5H0X3 SMR:F5H0X3 PRIDE:F5H0X3
Ensembl:ENST00000536340 UCSC:uc010zxy.1 OMA:VDNIRRK
ArrayExpress:F5H0X3 Bgee:F5H0X3 Uniprot:F5H0X3
Length = 1241
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 353 ITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ + +ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 107 VVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 157
>UNIPROTKB|F1SBF4 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:CU607040
Ensembl:ENSSSCT00000008158 Uniprot:F1SBF4
Length = 931
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 61 RNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 105
>ZFIN|ZDB-GENE-030131-6456 [details] [associations]
symbol:phf21ab "PHD finger protein 21Ab"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0060324
"face development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
ZFIN:ZDB-GENE-030131-6456 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060324
GeneTree:ENSGT00530000063984 EMBL:BX088562 IPI:IPI00499307
UniGene:Dr.80349 Ensembl:ENSDART00000021577 NextBio:20885937
Bgee:E7F750 Uniprot:E7F750
Length = 796
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 354 TSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+ D +++ C++C+ G+L++CD C +H CL L ++PKG W CP C
Sbjct: 454 SGDGDIHEDFCTVCRRSGQLLMCDTCSRVYHLDCLDPPLKNIPKGMWICPKC 505
>UNIPROTKB|F1NME8 [details] [associations]
symbol:Gga.29865 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:AADN02019301
IPI:IPI00581329 Ensembl:ENSGALT00000007232 Uniprot:F1NME8
Length = 1197
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 353 ITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ + +ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 98 VVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPEC 148
>UNIPROTKB|D4A9U0 [details] [associations]
symbol:Phf21b "PHD finger protein 21B (Predicted)"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 RGD:1308739 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:CH473950 CTD:112885
OrthoDB:EOG4P2Q2F GeneTree:ENSGT00530000063984 IPI:IPI00361455
RefSeq:NP_001124152.1 UniGene:Rn.198794 Ensembl:ENSRNOT00000017906
GeneID:300117 KEGG:rno:300117 NextBio:646365 Uniprot:D4A9U0
Length = 494
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 34/108 (31%), Positives = 48/108 (44%)
Query: 304 LSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRS------STRSQHDSITSDE 357
L ++ +K R TAN + G LE ++K L + + R+ D E
Sbjct: 248 LEEIQSKRQERKRRSTANPAYS--G--FLETERKRLASSYLHNPLFLTARANEDPCWKGE 303
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+DE C+ C+ G L C C ++H SCL L PKG W CP C
Sbjct: 304 ITHDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTAPKGVWVCPKC 351
>UNIPROTKB|B7ZM62 [details] [associations]
symbol:ZMYND8 "ZMYND8 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:BC136608 EMBL:BC144289 IPI:IPI00922821
SMR:B7ZM62 STRING:B7ZM62 Ensembl:ENST00000458360 UCSC:uc010zxz.1
HOGENOM:HOG000230951 Uniprot:B7ZM62
Length = 1054
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 81 RNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 125
>RGD|1307908 [details] [associations]
symbol:Ing5 "inhibitor of growth family, member 5" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1307908 GO:GO:0045893 GO:GO:0008285 GO:GO:0046872
GO:GO:0006260 GO:GO:0008270 GO:GO:0045926 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070776 GO:GO:0043966
InterPro:IPR024610 Pfam:PF12998 GeneTree:ENSGT00550000074538
IPI:IPI00948359 Ensembl:ENSRNOT00000065058 ArrayExpress:D3ZDZ0
Uniprot:D3ZDZ0
Length = 213
Score = 110 (43.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 363 ICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFCPSC 403
+C YG E++ CD DCP FH +C+ L PKG WFCP C
Sbjct: 163 LCHQVSYG-EMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRC 205
Score = 48 (22.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/54 (33%), Positives = 23/54 (42%)
Query: 46 EYSSSKGVFRYTSPNGNPYLSLSQVCRELGDSVDDV-PSEVSHDKVVNIPPQHC 98
E SS+G R TS P + E DS+ V PS+V V P +C
Sbjct: 109 EKRSSRGRGRRTSEEDTPKKKKHKSGSEFNDSILSVHPSDVLDMPVDPNEPTYC 162
>RGD|1308739 [details] [associations]
symbol:Phf21b "PHD finger protein 21B" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1308739 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 OMA:SDKQALG IPI:IPI00566233
Ensembl:ENSRNOT00000046327 Uniprot:F1LTZ7
Length = 512
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 34/108 (31%), Positives = 48/108 (44%)
Query: 304 LSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRS------STRSQHDSITSDE 357
L ++ +K R TAN + G LE ++K L + + R+ D E
Sbjct: 266 LEEIQSKRQERKRRSTANPAYS--G--FLETERKRLASSYLHNPLFLTARANEDPCWKGE 321
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+DE C+ C+ G L C C ++H SCL L PKG W CP C
Sbjct: 322 ITHDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTAPKGVWVCPKC 369
>UNIPROTKB|H7C0U2 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
EMBL:CH471077 GO:GO:0046872 GO:GO:0008270 GO:GO:0016301
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212 SMR:H7C0U2
Ensembl:ENST00000446994 Uniprot:H7C0U2
Length = 1105
Score = 130 (50.8 bits), Expect = 0.00017, P = 0.00017
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 61 RNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 105
>UNIPROTKB|F1MMY4 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV
EMBL:DAAA02018575 IPI:IPI00714897 Ensembl:ENSBTAT00000010497
Uniprot:F1MMY4
Length = 1368
Score = 131 (51.2 bits), Expect = 0.00017, P = 0.00017
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 338 ILCKNRSSTRS--QHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPK 395
I+C N + R +H + N C +C GG L+ C+ CP++FH CL + ++P
Sbjct: 814 IICTNHFTARKGKRHHAHV-----NVSWCFVCSKGGSLLCCESCPAAFHPDCLSI-EMPD 867
Query: 396 GNWFCPSC 403
G+WFC C
Sbjct: 868 GSWFCNDC 875
>TAIR|locus:2195945 [details] [associations]
symbol:AT1G77250 "AT1G77250" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:BT025330
IPI:IPI00544228 RefSeq:NP_177849.2 UniGene:At.50042
ProteinModelPortal:Q1JPM3 SMR:Q1JPM3 PaxDb:Q1JPM3 PRIDE:Q1JPM3
EnsemblPlants:AT1G77250.1 GeneID:844061 KEGG:ath:AT1G77250
TAIR:At1g77250 eggNOG:NOG147697 HOGENOM:HOG000090483
InParanoid:Q1JPM3 OMA:CQHAFLN PhylomeDB:Q1JPM3
Genevestigator:Q1JPM3 Uniprot:Q1JPM3
Length = 522
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 34/134 (25%), Positives = 56/134 (41%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSIC----QYGGELVLCDD--CPSSF-HKSCLVLNDL 393
+ SS H+ + ++ E+C C GG+ + CD CP + H CL +
Sbjct: 332 EENSSCNMNHEVHHVEMSRDSELCRTCGTKVDSGGKYITCDHPFCPHKYYHIRCLTSRQI 391
Query: 394 P-KG-NWFCPSCCCRICGIGKRKFEEKTEHSVDDVLRICGQCEHNFHVGCIEKSRAINLN 451
G W+C SC CR C +K DD + +C C+ +H+ C+
Sbjct: 392 KLHGVRWYCSSCLCRNC------LTDKD----DDKIVLCDGCDDAYHIYCMRPP----CE 437
Query: 452 NCSQNKWFCSDGCE 465
+ +WFC+ C+
Sbjct: 438 SVPNGEWFCT-ACK 450
>UNIPROTKB|Q2HXV1 [details] [associations]
symbol:ZMYND8 "RACK7 isoform l" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 Pfam:PF00855 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
EMBL:DQ368680 IPI:IPI01009867 SMR:Q2HXV1 Ensembl:ENST00000540497
UCSC:uc002xsv.1 Uniprot:Q2HXV1
Length = 1134
Score = 130 (50.8 bits), Expect = 0.00017, P = 0.00017
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 81 RNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 125
>UNIPROTKB|Q2HXV3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:DQ368678 IPI:IPI00941004 SMR:Q2HXV3
STRING:Q2HXV3 Ensembl:ENST00000372023 UCSC:uc010ghr.1
Uniprot:Q2HXV3
Length = 1136
Score = 130 (50.8 bits), Expect = 0.00017, P = 0.00017
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 81 RNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 125
>ZFIN|ZDB-GENE-040724-145 [details] [associations]
symbol:trim66 "tripartite motif containing 66"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 ZFIN:ZDB-GENE-040724-145
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GeneTree:ENSGT00530000062982 EMBL:BX323591
IPI:IPI00516161 Ensembl:ENSDART00000076510 Uniprot:F1QYE4
Length = 1119
Score = 140 (54.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 349 QHD-SITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+H S S E +N++ C++C GG+L+ CD CP FH SC V L+ P G+W C C
Sbjct: 890 EHQPSEESPEIENEDFCAVCLIGGDLLCCDRCPKVFHLSCHVPPLHSFPVGDWICTLC 947
Score = 39 (18.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 216 LVDGKLGRPIQDDQKRTAVLRSSKRARS--PERFASP 250
L+ G+ + D++ T ++S+R ++ PE P
Sbjct: 411 LLPADSGQTVMDEKSSTTGQKASRRGQTSAPEASTGP 447
>UNIPROTKB|E2R8R1 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:AAEX03013984 EMBL:AAEX03013985
Ensembl:ENSCAFT00000017108 OMA:PTINKGR Uniprot:E2R8R1
Length = 1143
Score = 130 (50.8 bits), Expect = 0.00017, P = 0.00017
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 81 RNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 125
>UNIPROTKB|F1RZJ3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:CU570721 Ensembl:ENSSSCT00000017228
Uniprot:F1RZJ3
Length = 1437
Score = 131 (51.2 bits), Expect = 0.00018, P = 0.00018
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 327 GGKPLLECQKKILCKNRSSTRSQ-HDSITSDEKQ-NDEICSICQYGGELVLCD--DCPSS 382
G +P C K +++ Q + ++ KQ +++ C C GGELV+CD DCP +
Sbjct: 1285 GVRPKSACASTTEEKAKNAKLKQKRRKVKTEPKQLHEDYCFQCGDGGELVMCDRKDCPKA 1344
Query: 383 FHKSCLVLNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+H CL L P G W CP C C F E
Sbjct: 1345 YHLLCLNLPQPPYGKWECPWHQCDECSSAAVSFCE 1379
>UNIPROTKB|J3KPU3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
ProteinModelPortal:J3KPU3 Ensembl:ENST00000396281 Uniprot:J3KPU3
Length = 1186
Score = 130 (50.8 bits), Expect = 0.00018, P = 0.00018
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
+ND C +C G+++ C+ CP +H CL L P+G+WFCP C
Sbjct: 86 RNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 130
>UNIPROTKB|O15016 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 EMBL:AJ400879 EMBL:AC091053
EMBL:AB002296 EMBL:AC104360 IPI:IPI00004420 IPI:IPI00941834
RefSeq:NP_055633.1 UniGene:Hs.130836 ProteinModelPortal:O15016
SMR:O15016 STRING:O15016 PhosphoSite:O15016 PaxDb:O15016
PRIDE:O15016 Ensembl:ENST00000299550 GeneID:9866 KEGG:hsa:9866
UCSC:uc010rbo.2 CTD:9866 GeneCards:GC11M008595 H-InvDB:HIX0201585
HGNC:HGNC:29005 HPA:HPA027420 MIM:612000 neXtProt:NX_O15016
PharmGKB:PA134954583 HOGENOM:HOG000074104 HOVERGEN:HBG057849
KO:K12032 GenomeRNAi:9866 NextBio:37189 ArrayExpress:O15016
Bgee:O15016 CleanEx:HS_TRIM66 Genevestigator:O15016
GermOnline:ENSG00000166436 Uniprot:O15016
Length = 1216
Score = 130 (50.8 bits), Expect = 0.00018, P = 0.00018
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+N++ C++C GGEL+ CD CP FH SC V L P G W C C
Sbjct: 968 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLC 1014
>UNIPROTKB|B5MCJ9 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369 EMBL:AC091053
EMBL:AC104360 IPI:IPI00941834 HGNC:HGNC:29005 HOGENOM:HOG000074104
HOVERGEN:HBG057849 ProteinModelPortal:B5MCJ9 SMR:B5MCJ9
STRING:B5MCJ9 PRIDE:B5MCJ9 Ensembl:ENST00000402157 OMA:HMENERA
OrthoDB:EOG42V8FR ArrayExpress:B5MCJ9 Bgee:B5MCJ9 Uniprot:B5MCJ9
Length = 1245
Score = 130 (50.8 bits), Expect = 0.00019, P = 0.00019
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+N++ C++C GGEL+ CD CP FH SC V L P G W C C
Sbjct: 997 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLC 1043
>RGD|1309152 [details] [associations]
symbol:Phf15 "PHD finger protein 15" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA;ISO] [GO:0043981
"histone H4-K5 acetylation" evidence=IEA;ISO] [GO:0043982 "histone
H4-K8 acetylation" evidence=IEA;ISO] [GO:0043983 "histone H4-K12
acetylation" evidence=IEA;ISO] [GO:0043984 "histone H4-K16
acetylation" evidence=ISO] InterPro:IPR001965 InterPro:IPR019787
PROSITE:PS50016 SMART:SM00249 RGD:1309152 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:CH473948 InterPro:IPR019542 Pfam:PF10513
GeneTree:ENSGT00690000101689 CTD:23338 OMA:RKARGRT
RefSeq:NP_001100468.1 UniGene:Rn.99384 Ensembl:ENSRNOT00000043343
GeneID:303113 KEGG:rno:303113 NextBio:650698 Uniprot:G3V9F5
Length = 829
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 58/251 (23%), Positives = 99/251 (39%)
Query: 331 LLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQY-----GGELVLCDDCPSSFHK 385
+LE + + LC + + E D +C +C+ G E+V CD C H+
Sbjct: 170 VLE-ELETLCHQNMAQAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQ 228
Query: 386 SCLVLNDLPKGNWFCPSCC------CRICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFH 438
+C + +P G+W C +C C +C KR K S + + C
Sbjct: 229 ACYGILKVPTGSWLCRTCALGVQPKCLLCP--KRGGALKPTRSGTKWVHVSCALWIPEVS 286
Query: 439 VGCIEKSRAIN-LNNCSQNKWFCSDGCEVISSCLHEILD--KPFQLGVDDLTWRLLKSME 495
+GC EK I +++ ++W S C + C + P L +T + +E
Sbjct: 287 IGCPEKMEPITKISHIPASRWALS--CSLCKECTGTCIQCSTPSCLTAFHVTCAFDRGLE 344
Query: 496 VRDHHGPSNSKEMEEALMENQSKLSVALDVMHECFEPIKDVLTERDLVEDVIFNRRSDLN 555
+R N + ++L + S + E EP + V DL E V R+ L
Sbjct: 345 MRTILA-DNDEVKFKSLCQEHSDGGPRSEPSSEPVEPSQAV---EDL-EKVTL-RKQRLQ 398
Query: 556 RLNFQGFYTIL 566
+L + FY ++
Sbjct: 399 QLE-ENFYELV 408
>FB|FBgn0029861 [details] [associations]
symbol:CG3815 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070822 "Sin3-type complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070822 HSSP:Q14839
eggNOG:NOG145066 GeneTree:ENSGT00440000033777 EMBL:AY069054
RefSeq:NP_572311.1 UniGene:Dm.2312 SMR:Q9W410 IntAct:Q9W410
MINT:MINT-921456 STRING:Q9W410 EnsemblMetazoa:FBtr0070899
GeneID:31571 KEGG:dme:Dmel_CG3815 UCSC:CG3815-RA
FlyBase:FBgn0029861 InParanoid:Q9W410 OMA:SEFGTEV OrthoDB:EOG45HQC9
GenomeRNAi:31571 NextBio:774240 Uniprot:Q9W410
Length = 878
Score = 136 (52.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 26/64 (40%), Positives = 33/64 (51%)
Query: 345 STRSQHDSITSDEK-QNDEICSICQYGGELVLCDDCPSSFHKSC----LVLNDLPKGNWF 399
ST ++H + N + C C+ GG L+ CD CPSSFH C L D+P G W
Sbjct: 36 STNTKHPYYRRPGRGHNHDYCDACEEGGNLLCCDRCPSSFHLQCHDPPLSEEDIPSGQWL 95
Query: 400 CPSC 403
C SC
Sbjct: 96 CHSC 99
Score = 40 (19.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 650 QKLLRKVPLSALESLLPWKQ 669
+KLL K+P+S +L P K+
Sbjct: 159 EKLLAKMPMSIQRALDPNKK 178
Score = 37 (18.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 9/36 (25%), Positives = 12/36 (33%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCE 465
C C FH C++ L W C + E
Sbjct: 274 CDYCPLYFHQDCLDPP----LTALPAGLWMCPNHAE 305
>RGD|1307955 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003149 "membranous septum morphogenesis" evidence=ISO]
[GO:0003289 "atrial septum primum morphogenesis" evidence=ISO]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016568 "chromatin modification" evidence=ISO]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0034968 "histone
lysine methylation" evidence=ISO] [GO:0060348 "bone development"
evidence=ISO] REFSEQ:NM_001191552 Ncbi:NP_001178481
Length = 1346
Score = 130 (50.8 bits), Expect = 0.00021, P = 0.00021
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDD--CPSSFHKSCLVLNDLPKGNW 398
K + TR + ++Q+++ C C GG+LVLCD C ++H SCL L P G W
Sbjct: 1201 KAKKKTRRRRAK-GEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKW 1259
Query: 399 FCPSCCCRICG 409
CP C +CG
Sbjct: 1260 ECPWHHCDVCG 1270
Score = 127 (49.8 bits), Expect = 0.00044, P = 0.00044
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 364 CSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
C +C GG L+ C+ CP++FH CL + ++P G+WFC C
Sbjct: 815 CFVCSKGGSLLCCEACPAAFHPDCLSI-EMPDGSWFCNDC 853
>RGD|1583154 [details] [associations]
symbol:LOC686349 "similar to Wolf-Hirschhorn syndrome candidate
1 protein isoform 3" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0060348 "bone development"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505 RGD:1583154
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 IPI:IPI00779496
Ensembl:ENSRNOT00000021952 OrthoDB:EOG4V6ZFW ArrayExpress:D4A9J4
Uniprot:D4A9J4
Length = 1366
Score = 130 (50.8 bits), Expect = 0.00021, P = 0.00021
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDD--CPSSFHKSCLVLNDLPKGNW 398
K + TR + ++Q+++ C C GG+LVLCD C ++H SCL L P G W
Sbjct: 1221 KAKKKTRRRRAK-GEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKW 1279
Query: 399 FCPSCCCRICG 409
CP C +CG
Sbjct: 1280 ECPWHHCDVCG 1290
Score = 127 (49.8 bits), Expect = 0.00045, P = 0.00044
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 364 CSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
C +C GG L+ C+ CP++FH CL + ++P G+WFC C
Sbjct: 835 CFVCSKGGSLLCCEACPAAFHPDCLSI-EMPDGSWFCNDC 873
>UNIPROTKB|H7C212 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 EMBL:AC005631 EMBL:AC006017 EMBL:AC104692
HGNC:HGNC:13726 ChiTaRS:MLL3 EMBL:AC006474
ProteinModelPortal:H7C212 Ensembl:ENST00000418673 Uniprot:H7C212
Length = 228
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 24/51 (47%), Positives = 27/51 (52%)
Query: 362 EICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCC-CRICG 409
E C G L+LCDDC S+H CL L +PKG W C C CR CG
Sbjct: 167 EACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCG 217
>UNIPROTKB|E2R8X6 [details] [associations]
symbol:ING1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR024610 Pfam:PF12998
CTD:3621 OMA:FETCQET GeneTree:ENSGT00550000074538 EMBL:AAEX03013390
RefSeq:XP_534185.1 ProteinModelPortal:E2R8X6
Ensembl:ENSCAFT00000009849 GeneID:476984 KEGG:cfa:476984
NextBio:20852545 Uniprot:E2R8X6
Length = 279
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 328 GKPLLECQKKILCKNRSSTRSQHDSITSDEK--QNDEICSIC-QYG-GELVLCD--DCPS 381
G P + K K RS +++ ++ +D N+ +C Q GE++ CD +CP
Sbjct: 174 GTPKEKKAKASKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPI 233
Query: 382 S-FHKSCLVLNDLPKGNWFCPSC 403
FH SC+ LN PKG W+CP C
Sbjct: 234 EWFHFSCVGLNHKPKGKWYCPKC 256
>UNIPROTKB|J9NYI4 [details] [associations]
symbol:LOC478381 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR024610 Pfam:PF12998 GeneTree:ENSGT00550000074538
EMBL:AAEX03016430 RefSeq:XP_535556.1 Ensembl:ENSCAFT00000012736
GeneID:478381 KEGG:cfa:478381 OMA:YVDYVEN Uniprot:J9NYI4
Length = 279
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 328 GKPLLECQKKILCKNRSSTRSQHDSITSDEK--QNDEICSIC-QYG-GELVLCD--DCPS 381
G P + K K RS +++ ++ +D N+ +C Q GE++ CD +CP
Sbjct: 174 GTPKEKKAKASKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPI 233
Query: 382 S-FHKSCLVLNDLPKGNWFCPSC 403
FH SC+ LN PKG W+CP C
Sbjct: 234 EWFHFSCVGLNHKPKGKWYCPKC 256
>MGI|MGI:1349481 [details] [associations]
symbol:Ing1 "inhibitor of growth family, member 1"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IMP]
[GO:0006606 "protein import into nucleus" evidence=IMP] [GO:0007049
"cell cycle" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010941 "regulation of cell death" evidence=IMP]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1349481 GO:GO:0005634 GO:GO:0045893
GO:GO:0010941 GO:GO:0046872 GO:GO:0008270 GO:GO:0007049
GO:GO:0006606 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HOGENOM:HOG000239724 InterPro:IPR024610
Pfam:PF12998 CTD:3621 eggNOG:COG5034 HOVERGEN:HBG006607 OMA:FETCQET
EMBL:AF177753 EMBL:AF177755 EMBL:AF177756 EMBL:AF177757
EMBL:AF149820 EMBL:BC016573 EMBL:BC147770 EMBL:BC147784
IPI:IPI00135607 IPI:IPI00399921 RefSeq:NP_036049.2 UniGene:Mm.25709
ProteinModelPortal:Q9QXV3 SMR:Q9QXV3 STRING:Q9QXV3
PhosphoSite:Q9QXV3 PRIDE:Q9QXV3 DNASU:26356
Ensembl:ENSMUST00000054399 GeneID:26356 KEGG:mmu:26356
UCSC:uc009kvm.1 GeneTree:ENSGT00550000074538 InParanoid:B2RWH0
OrthoDB:EOG4DFPP9 NextBio:304199 Bgee:Q9QXV3 CleanEx:MM_ING1
Genevestigator:Q9QXV3 GermOnline:ENSMUSG00000045969 Uniprot:Q9QXV3
Length = 279
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 328 GKPLLECQKKILCKNRSSTRSQHDSITSDEK--QNDEICSIC-QYG-GELVLCD--DCPS 381
G P + K K RS +++ ++ +D N+ +C Q GE++ CD +CP
Sbjct: 174 GTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPI 233
Query: 382 S-FHKSCLVLNDLPKGNWFCPSC 403
FH SC+ LN PKG W+CP C
Sbjct: 234 EWFHFSCVGLNHKPKGKWYCPKC 256
>MGI|MGI:2443812 [details] [associations]
symbol:Phf21b "PHD finger protein 21B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
MGI:MGI:2443812 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 HOVERGEN:HBG080293 CTD:112885 eggNOG:NOG291382
OMA:SDKQALG EMBL:AK042863 IPI:IPI00227362 RefSeq:NP_001074635.2
UniGene:Mm.101022 ProteinModelPortal:Q8C966 SMR:Q8C966
STRING:Q8C966 PhosphoSite:Q8C966 PRIDE:Q8C966
Ensembl:ENSMUST00000159939 GeneID:271305 KEGG:mmu:271305
UCSC:uc007xco.2 GeneTree:ENSGT00530000063984 NextBio:393443
Bgee:Q8C966 CleanEx:MM_PHF21B Genevestigator:Q8C966
GermOnline:ENSMUSG00000016624 Uniprot:Q8C966
Length = 487
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 34/108 (31%), Positives = 48/108 (44%)
Query: 304 LSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRS------STRSQHDSITSDE 357
L ++ +K R TAN + G LE ++K L + + R+ D E
Sbjct: 248 LEEIQSKRQERKRRSTANPAYS--G--FLETERKRLASSYLHNPLFLTARANEDPCWKGE 303
Query: 358 KQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+DE C+ C+ G L C C ++H SCL L PKG W CP C
Sbjct: 304 ITHDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTPPKGLWVCPKC 351
>UNIPROTKB|F1P2P2 [details] [associations]
symbol:ING1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0010941 "regulation of cell death" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0005634 GO:GO:0045893
GO:GO:0010941 GO:GO:0046872 GO:GO:0008270 GO:GO:0006606
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR024610 Pfam:PF12998 OMA:FETCQET
GeneTree:ENSGT00550000074538 EMBL:AADN02017984 IPI:IPI00598448
Ensembl:ENSGALT00000027219 Uniprot:F1P2P2
Length = 235
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 328 GKPLLECQKKILCKNRSSTRSQHDSITSDEK--QNDEICSIC-QYG-GELVLCD--DCPS 381
G P + K K RS +++ ++ D N+ +C Q GE++ CD +CP
Sbjct: 130 GTPKEKKAKTSKKKKRSKAKAEREASPPDLPIDPNEPTYCLCNQVSYGEMIGCDNDECPI 189
Query: 382 S-FHKSCLVLNDLPKGNWFCPSC 403
FH SC+ LN PKG W+CP C
Sbjct: 190 EWFHFSCVGLNHKPKGKWYCPKC 212
>ZFIN|ZDB-GENE-050324-2 [details] [associations]
symbol:whsc1l1 "Wolf-Hirschhorn syndrome candidate
1-like 1" species:7955 "Danio rerio" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 ZFIN:ZDB-GENE-050324-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:BX294119
EMBL:CT027767 IPI:IPI00803597 Ensembl:ENSDART00000091115
Bgee:F1QV68 Uniprot:F1QV68
Length = 1521
Score = 143 (55.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 331 LLECQKKILCKNRSSTRSQHDSITSDEKQNDEI-CSICQYGGELVLCD--DCPSSFHKSC 387
++E ++K+ +N + + + + ++ KQ E+ C C GGELV+CD DCP ++H C
Sbjct: 1365 VMEREEKV--RN-AKLKPKKRKLKTESKQTHELYCYCCGEGGELVMCDKKDCPKAYHLLC 1421
Query: 388 LVLNDLPKGNWFCPSCCCRIC 408
L L+ P G W CP C +C
Sbjct: 1422 LNLSKPPYGRWECPWHQCSVC 1442
Score = 37 (18.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 14/70 (20%), Positives = 25/70 (35%)
Query: 170 GLDSKGMVSCNKSPSATTSTKHGEDSEVSQTXXXXXXXXXXXXXQPLVDGKLGRPIQDDQ 229
G DS+ K ++HG E SQ P+ + +++Q
Sbjct: 259 GEDSRRQHEQKKEKRKKRGSRHGAGHEESQQPSKVEEERSVVVHNPVQTTESQVAFREEQ 318
Query: 230 KRTAVLRSSK 239
+ + L+S K
Sbjct: 319 QPQSSLKSPK 328
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 134 (52.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C +C G + L+LCD C S+H CL+ L+D+PKG+W CP C + C + F
Sbjct: 274 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGF 333
Query: 418 KTEHSVDDVLRICGQCEHNF 437
+ + + D LR G+ F
Sbjct: 334 E-QAARDYTLRTFGEMADAF 352
Score = 46 (21.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFC 460
C C FH GC+ A+ W C
Sbjct: 1155 CELCRGFFHTGCVSVPHALQ----GPRVWLC 1181
>UNIPROTKB|F1NI27 [details] [associations]
symbol:ING3 "Inhibitor of growth protein 3" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
[GO:0032777 "Piccolo NuA4 histone acetyltransferase complex"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043967 "histone H4 acetylation"
evidence=IEA] [GO:0043968 "histone H2A acetylation" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 GO:GO:0043065
GO:GO:0043968 GO:GO:0043967 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004402 GO:GO:0032777 InterPro:IPR024610
Pfam:PF12998 GeneTree:ENSGT00550000074538 IPI:IPI00596007
OMA:NNQVDWT EMBL:AADN02010189 Ensembl:ENSGALT00000014681
Uniprot:F1NI27
Length = 384
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFC 400
S + SQ D + IC+ YG E+V CD DCP FH C+ L + PKG W+C
Sbjct: 311 SDSNSQVDWTYDPNEPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYC 369
Query: 401 PSCCCRICGIGKR 413
P C + G R
Sbjct: 370 PQCTAAMKRRGSR 382
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 134 (52.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C +C G + L+LCD C S+H CL+ L+D+PKG+W CP C + C + F
Sbjct: 285 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGF 344
Query: 418 KTEHSVDDVLRICGQCEHNF 437
+ + + D LR G+ F
Sbjct: 345 E-QAARDYTLRTFGEMADAF 363
Score = 46 (21.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFC 460
C C FH GC+ A+ W C
Sbjct: 1166 CELCRGFFHTGCVSVPHALQ----GPRVWLC 1192
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 134 (52.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C +C G + L+LCD C S+H CL+ L+D+PKG+W CP C + C + F
Sbjct: 286 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGF 345
Query: 418 KTEHSVDDVLRICGQCEHNF 437
+ + + D LR G+ F
Sbjct: 346 E-QAARDYTLRTFGEMADAF 364
Score = 46 (21.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFC 460
C C FH GC+ A+ W C
Sbjct: 1167 CELCRGFFHTGCVSVPHALQ----GPRVWLC 1193
>MGI|MGI:1924057 [details] [associations]
symbol:Phf12 "PHD finger protein 12" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISO]
[GO:0001222 "transcription corepressor binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=ISO]
[GO:0017053 "transcriptional repressor complex" evidence=ISO]
[GO:0035091 "phosphatidylinositol binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1924057 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 EMBL:AL669840 CTD:57649 eggNOG:NOG145066
HOGENOM:HOG000220810 HOVERGEN:HBG057884 OMA:MSSQAQG
OrthoDB:EOG4VHK63 ChiTaRS:PHF12 EMBL:AL845484 EMBL:BC043080
EMBL:AK129383 IPI:IPI00330525 IPI:IPI00515364 RefSeq:NP_777277.2
UniGene:Mm.274329 ProteinModelPortal:Q5SPL2 SMR:Q5SPL2
DIP:DIP-59633N PhosphoSite:Q5SPL2 PRIDE:Q5SPL2
Ensembl:ENSMUST00000049167 Ensembl:ENSMUST00000108360 GeneID:268448
KEGG:mmu:268448 GeneTree:ENSGT00440000033777 InParanoid:Q5SPL2
NextBio:392291 Bgee:Q5SPL2 CleanEx:MM_PHF12 Genevestigator:Q5SPL2
GermOnline:ENSMUSG00000037791 Uniprot:Q5SPL2
Length = 1003
Score = 132 (51.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S + + +S S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 38 KRSRKPEKESRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 97
Query: 399 FCPSCCCRICGIGKRKFEEKTE 420
C C R ++K E+K E
Sbjct: 98 MCHRCTVR-----RKKREQKKE 114
Score = 44 (20.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCE 465
C C FH+ C+E L +W C + E
Sbjct: 289 CDYCPLLFHMDCLEPP----LTAMPLGRWMCPNHIE 320
>UNIPROTKB|E7ET07 [details] [associations]
symbol:ING3 "Inhibitor of growth protein 3" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR024610 Pfam:PF12998
EMBL:AC004537 HGNC:HGNC:14587 ChiTaRS:ING3 IPI:IPI00927032
ProteinModelPortal:E7ET07 SMR:E7ET07 Ensembl:ENST00000431467
ArrayExpress:E7ET07 Bgee:E7ET07 Uniprot:E7ET07
Length = 403
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFC 400
S + SQ D + IC+ YG E+V CD DCP FH C+ L + PKG W+C
Sbjct: 330 SDSNSQVDWTYDPNEPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYC 388
Query: 401 PSCCCRICGIGKR 413
P C + G R
Sbjct: 389 PQCTAAMKRRGSR 401
>UNIPROTKB|Q5RBA1 [details] [associations]
symbol:ING3 "Inhibitor of growth protein 3" species:9601
"Pongo abelii" [GO:0032777 "Piccolo NuA4 histone acetyltransferase
complex" evidence=ISS] [GO:0035267 "NuA4 histone acetyltransferase
complex" evidence=ISS] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0043967 "histone H4
acetylation" evidence=ISS] [GO:0043968 "histone H2A acetylation"
evidence=ISS] [GO:0004402 "histone acetyltransferase activity"
evidence=ISS] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0043065 GO:GO:0043968
GO:GO:0043967 GO:GO:0040008 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0032777 InterPro:IPR024610 Pfam:PF12998
HOVERGEN:HBG006607 HSSP:Q9NXR8 CTD:54556 HOGENOM:HOG000239725
KO:K11319 EMBL:CR858750 RefSeq:NP_001125551.1 UniGene:Pab.5375
ProteinModelPortal:Q5RBA1 SMR:Q5RBA1 GeneID:100172464
KEGG:pon:100172464 InParanoid:Q5RBA1 Uniprot:Q5RBA1
Length = 403
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFC 400
S + SQ D + IC+ YG E+V CD DCP FH C+ L + PKG W+C
Sbjct: 330 SDSNSQVDWTYDPNEPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYC 388
Query: 401 PSCCCRICGIGKR 413
P C + G R
Sbjct: 389 PQCTAAMKRRGSR 401
>MGI|MGI:1924151 [details] [associations]
symbol:Phf15 "PHD finger protein 15" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043966 "histone
H3 acetylation" evidence=ISO] [GO:0043981 "histone H4-K5
acetylation" evidence=ISO] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO] [GO:0043983 "histone H4-K12 acetylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
MGI:MGI:1924151 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0043966
InterPro:IPR019542 Pfam:PF10513 GO:GO:0043983 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 HOGENOM:HOG000220882 HOVERGEN:HBG053585
GeneTree:ENSGT00690000101689 CTD:23338 EMBL:AK129097 EMBL:AK147453
EMBL:BC117856 EMBL:BC117857 EMBL:BN000285 IPI:IPI00420599
IPI:IPI00720133 RefSeq:NP_955003.2 UniGene:Mm.259996
ProteinModelPortal:Q6ZQF7 SMR:Q6ZQF7 PhosphoSite:Q6ZQF7
PRIDE:Q6ZQF7 Ensembl:ENSMUST00000020655 Ensembl:ENSMUST00000109091
GeneID:76901 KEGG:mmu:76901 InParanoid:Q6ZQF7 OMA:RKARGRT
OrthoDB:EOG41NTKC NextBio:346051 Bgee:Q6ZQF7 CleanEx:MM_PHF15
Genevestigator:Q6ZQF7 GermOnline:ENSMUSG00000020387 Uniprot:Q6ZQF7
Length = 829
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 57/251 (22%), Positives = 99/251 (39%)
Query: 331 LLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQY-----GGELVLCDDCPSSFHK 385
+LE + + LC + + E D +C +C+ G E+V CD C H+
Sbjct: 170 VLE-ELETLCHQNMAQAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQ 228
Query: 386 SCLVLNDLPKGNWFCPSCC------CRICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFH 438
+C + +P G+W C +C C +C KR K S + + C
Sbjct: 229 ACYGILKVPTGSWLCRTCALGVQPKCLLCP--KRGGALKPTRSGTKWVHVSCALWIPEVS 286
Query: 439 VGCIEKSRAIN-LNNCSQNKWFCSDGCEVISSCLHEILD--KPFQLGVDDLTWRLLKSME 495
+GC EK I +++ ++W S C + C + P + +T + +E
Sbjct: 287 IGCPEKMEPITKISHIPASRWALS--CSLCKECTGTCIQCSMPSCITAFHVTCAFDRGLE 344
Query: 496 VRDHHGPSNSKEMEEALMENQSKLSVALDVMHECFEPIKDVLTERDLVEDVIFNRRSDLN 555
+R N + ++L + S + E EP + V DL E V R+ L
Sbjct: 345 MRTILA-DNDEVKFKSLCQEHSDGGPRSEPTSEPVEPSQAV---EDL-EKVTL-RKQRLQ 398
Query: 556 RLNFQGFYTIL 566
+L + FY ++
Sbjct: 399 QLE-ENFYELV 408
>ZFIN|ZDB-GENE-040109-3 [details] [associations]
symbol:ing3 "inhibitor of growth family, member 3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-040109-3 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR024610 Pfam:PF12998 eggNOG:COG5034 HOVERGEN:HBG006607
GeneTree:ENSGT00550000074538 CTD:54556 HOGENOM:HOG000239725
KO:K11319 OrthoDB:EOG4H19WB OMA:NNQVDWT EMBL:AL929016 EMBL:BX897748
EMBL:AY423027 IPI:IPI00508401 RefSeq:NP_957231.1 UniGene:Dr.75864
SMR:Q6TEM2 STRING:Q6TEM2 Ensembl:ENSDART00000037140
Ensembl:ENSDART00000122636 GeneID:393911 KEGG:dre:393911
InParanoid:Q6TEM2 NextBio:20814888 Uniprot:Q6TEM2
Length = 416
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFC 400
+ T SQ D + IC+ YG E+V CD DCP FH C+ L + PKG W+C
Sbjct: 343 TDTSSQVDWTYDPNEPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYC 401
Query: 401 PSCCCRICGIGKR 413
P C + G R
Sbjct: 402 PQCTAAMKRRGSR 414
>UNIPROTKB|Q5ZK36 [details] [associations]
symbol:ING3 "Inhibitor of growth protein 3" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=ISS] [GO:0043968 "histone H2A
acetylation" evidence=ISS] [GO:0043967 "histone H4 acetylation"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0043065 GO:GO:0043968 GO:GO:0043967 GO:GO:0040008
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR024610 Pfam:PF12998 eggNOG:COG5034 HOVERGEN:HBG006607
HSSP:Q9NXR8 EMBL:AJ720248 IPI:IPI00596007 RefSeq:NP_001025904.1
UniGene:Gga.1339 ProteinModelPortal:Q5ZK36 SMR:Q5ZK36 STRING:Q5ZK36
GeneID:417762 KEGG:gga:417762 CTD:54556 HOGENOM:HOG000239725
InParanoid:Q5ZK36 KO:K11319 OrthoDB:EOG4H19WB NextBio:20821014
Uniprot:Q5ZK36
Length = 417
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFC 400
S + SQ D + IC+ YG E+V CD DCP FH C+ L + PKG W+C
Sbjct: 344 SDSNSQVDWTYDPNEPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYC 402
Query: 401 PSCCCRICGIGKR 413
P C + G R
Sbjct: 403 PQCTAAMKRRGSR 415
>UNIPROTKB|E1BQ25 [details] [associations]
symbol:ING3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0032777 "Piccolo NuA4 histone acetyltransferase complex"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 GO:GO:0043065
GO:GO:0043968 GO:GO:0043967 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004402 GO:GO:0032777 InterPro:IPR024610
Pfam:PF12998 GeneTree:ENSGT00550000074538 CTD:54556 KO:K11319
OMA:NNQVDWT EMBL:DAAA02011371 IPI:IPI00694679 RefSeq:NP_001179873.1
UniGene:Bt.105415 PRIDE:E1BQ25 Ensembl:ENSBTAT00000021725
GeneID:513000 KEGG:bta:513000 NextBio:20870653 Uniprot:E1BQ25
Length = 418
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFC 400
S + SQ D + IC+ YG E+V CD DCP FH C+ L + PKG W+C
Sbjct: 345 SDSNSQVDWTYDPNEPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYC 403
Query: 401 PSCCCRICGIGKR 413
P C + G R
Sbjct: 404 PQCTAAMKRRGSR 416
>UNIPROTKB|E2R0U9 [details] [associations]
symbol:ING3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043968 "histone H2A acetylation"
evidence=IEA] [GO:0043967 "histone H4 acetylation" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0032777 "Piccolo NuA4 histone acetyltransferase
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0043065 GO:GO:0043968 GO:GO:0043967 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004402 GO:GO:0032777
InterPro:IPR024610 Pfam:PF12998 GeneTree:ENSGT00550000074538
CTD:54556 KO:K11319 OMA:NNQVDWT EMBL:AAEX03009477
RefSeq:XP_532530.2 ProteinModelPortal:E2R0U9
Ensembl:ENSCAFT00000005605 GeneID:475299 KEGG:cfa:475299
NextBio:20851159 Uniprot:E2R0U9
Length = 418
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFC 400
S + SQ D + IC+ YG E+V CD DCP FH C+ L + PKG W+C
Sbjct: 345 SDSNSQVDWTYDPNEPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYC 403
Query: 401 PSCCCRICGIGKR 413
P C + G R
Sbjct: 404 PQCTAAMKRRGSR 416
>UNIPROTKB|Q9NXR8 [details] [associations]
symbol:ING3 "Inhibitor of growth protein 3" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0032777 "Piccolo NuA4 histone acetyltransferase complex"
evidence=IDA] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=IDA] [GO:0043967 "histone H4 acetylation" evidence=IDA]
[GO:0004402 "histone acetyltransferase activity" evidence=IDA]
[GO:0043968 "histone H2A acetylation" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IDA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0043065 GO:GO:0043968 GO:GO:0043967
GO:GO:0040008 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0035064 GO:GO:0032777 InterPro:IPR024610
Pfam:PF12998 MIM:275355 Orphanet:67037 eggNOG:COG5034
HOVERGEN:HBG006607 CTD:54556 KO:K11319 OrthoDB:EOG4H19WB
EMBL:AF074968 EMBL:AY007790 EMBL:AK000096 EMBL:AK291905
EMBL:AF161419 EMBL:AL603623 EMBL:AC004537 EMBL:BC009777
EMBL:BC010851 EMBL:BC062634 EMBL:BC073865 EMBL:BC093091
EMBL:BC093689 EMBL:BC101609 IPI:IPI00387159 IPI:IPI00413787
IPI:IPI00478624 RefSeq:NP_061944.2 RefSeq:NP_938008.1
UniGene:Hs.489811 PDB:1X4I PDBsum:1X4I ProteinModelPortal:Q9NXR8
SMR:Q9NXR8 IntAct:Q9NXR8 STRING:Q9NXR8 PhosphoSite:Q9NXR8
DMDM:59798432 PRIDE:Q9NXR8 DNASU:54556 Ensembl:ENST00000315870
Ensembl:ENST00000339121 Ensembl:ENST00000427726
Ensembl:ENST00000445699 GeneID:54556 KEGG:hsa:54556 UCSC:uc003vjm.1
UCSC:uc003vjn.3 GeneCards:GC07P120590 HGNC:HGNC:14587 MIM:607493
neXtProt:NX_Q9NXR8 PharmGKB:PA29875 InParanoid:Q9NXR8 OMA:NNQVDWT
PhylomeDB:Q9NXR8 ChiTaRS:ING3 EvolutionaryTrace:Q9NXR8
GenomeRNAi:54556 NextBio:57036 ArrayExpress:Q9NXR8 Bgee:Q9NXR8
CleanEx:HS_ING3 Genevestigator:Q9NXR8 GermOnline:ENSG00000071243
Uniprot:Q9NXR8
Length = 418
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFC 400
S + SQ D + IC+ YG E+V CD DCP FH C+ L + PKG W+C
Sbjct: 345 SDSNSQVDWTYDPNEPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYC 403
Query: 401 PSCCCRICGIGKR 413
P C + G R
Sbjct: 404 PQCTAAMKRRGSR 416
>UNIPROTKB|F1SJF6 [details] [associations]
symbol:ING3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0032777 "Piccolo NuA4 histone acetyltransferase complex"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 GO:GO:0043065
GO:GO:0043968 GO:GO:0043967 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004402 GO:GO:0032777 InterPro:IPR024610
Pfam:PF12998 GeneTree:ENSGT00550000074538 CTD:54556 KO:K11319
OMA:NNQVDWT EMBL:CU463290 RefSeq:NP_001231197.1 UniGene:Ssc.26415
Ensembl:ENSSSCT00000018093 GeneID:100512026 KEGG:ssc:100512026
Uniprot:F1SJF6
Length = 418
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 344 SSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSS-FHKSCLVLNDLPKGNWFC 400
S + SQ D + IC+ YG E+V CD DCP FH C+ L + PKG W+C
Sbjct: 345 SDSNSQVDWTYDPNEPRYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYC 403
Query: 401 PSCCCRICGIGKR 413
P C + G R
Sbjct: 404 PQCTAAMKRRGSR 416
>UNIPROTKB|G3N175 [details] [associations]
symbol:G3N175 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50864
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00510000046835 EMBL:DAAA02006184
Ensembl:ENSBTAT00000064013 OMA:NCKKFNK Uniprot:G3N175
Length = 258
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 32/103 (31%), Positives = 48/103 (46%)
Query: 302 FTLSGFEAHAGSQKHRPTANIILNEGGKPLLECQKKILCKNRSSTRSQHDSITSDEKQND 361
FT FE G + + I + GG+PLL +K K+ +T D++ N
Sbjct: 25 FTPREFEIRGGHGRSK-NWKISVRCGGRPLLWLMEKRGPKSPDNTL---DNLCLG---NS 77
Query: 362 EICSICQYGGELVLCDDCPSSFHKSCLVLN-DLPKGNWFCPSC 403
++C C+ GG+L CD C SFH+ C + + K W C C
Sbjct: 78 DVCETCRDGGKLFCCDTCSRSFHEDCHIPPVETEKDPWSCTFC 120
>UNIPROTKB|B5MBX1 [details] [associations]
symbol:PHF15 "Protein Jade-2" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR019542 Pfam:PF10513
HOGENOM:HOG000220882 HOVERGEN:HBG053585 HGNC:HGNC:22984
ChiTaRS:PHF15 EMBL:AC005355 EMBL:AC106763 IPI:IPI00879500
ProteinModelPortal:B5MBX1 SMR:B5MBX1 STRING:B5MBX1
Ensembl:ENST00000402835 UCSC:uc003kzn.2 ArrayExpress:B5MBX1
Bgee:B5MBX1 Uniprot:B5MBX1
Length = 509
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 37/153 (24%), Positives = 62/153 (40%)
Query: 331 LLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQY-----GGELVLCDDCPSSFHK 385
+LE + + LC + + E D +C +C+ G E+V CD C H+
Sbjct: 170 VLE-ELETLCHQNMARAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQ 228
Query: 386 SCLVLNDLPKGNWFCPSCC------CRICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFH 438
+C + +P G+W C +C C +C KR K S + + C
Sbjct: 229 ACYGILKVPTGSWLCRTCALGVQPKCLLCP--KRGGALKPTRSGTKWVHVSCALWIPEVS 286
Query: 439 VGCIEKSRAIN-LNNCSQNKWFCSDGCEVISSC 470
+GC EK I +++ ++W S C + C
Sbjct: 287 IGCPEKMEPITKISHIPASRWALS--CSLCKEC 317
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 127 (49.8 bits), Expect = 0.00035, P = 0.00035
Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 363 ICSICQYGG---ELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C C G +L+LCD C S+H CL+ L D+PKG+W CP C C + F
Sbjct: 295 VCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVAEECNKPREAFG- 353
Query: 418 KTEHSVDD-VLRICGQCEHNF 437
E ++ + L+ G+ NF
Sbjct: 354 -FEQAIREYTLQSFGEMADNF 373
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 127 (49.8 bits), Expect = 0.00035, P = 0.00035
Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 363 ICSICQYGG---ELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C C G +L+LCD C S+H CL+ L D+PKG+W CP C C + F
Sbjct: 295 VCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVAEECNKPREAFG- 353
Query: 418 KTEHSVDD-VLRICGQCEHNF 437
E ++ + L+ G+ NF
Sbjct: 354 -FEQAIREYTLQSFGEMADNF 373
>UNIPROTKB|F1S8S0 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV EMBL:FP102229
EMBL:FP102127 Ensembl:ENSSSCT00000009499 Uniprot:F1S8S0
Length = 1361
Score = 128 (50.1 bits), Expect = 0.00035, P = 0.00035
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 364 CSICQYGGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSC 403
C +C GG L+ C+ CP++FH CL + ++P G+WFC C
Sbjct: 830 CFVCSKGGSLLCCESCPAAFHPDCLNI-EMPDGSWFCNDC 868
Score = 126 (49.4 bits), Expect = 0.00057, P = 0.00057
Identities = 26/69 (37%), Positives = 34/69 (49%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCD--DCPSSFHKSCLVLNDLPKGNWFC 400
+ TR + ++ DE C C GG+LVLCD C ++H CL L P G W C
Sbjct: 1218 KKRTRRRRSKGEGKKRSEDE-CFRCGDGGQLVLCDRKSCTKAYHLPCLGLGKRPFGKWEC 1276
Query: 401 PSCCCRICG 409
P C +CG
Sbjct: 1277 PWHHCDVCG 1285
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 129 (50.5 bits), Expect = 0.00035, P = 0.00035
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 363 ICSICQYGG---ELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C C G +L+LCD C S+H CL+ L D+PKG+W CP C C + F
Sbjct: 298 VCLFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFG- 356
Query: 418 KTEHSVDD-VLRICGQCEHNF 437
E +V + L+ G+ NF
Sbjct: 357 -FEQAVREYTLQSFGEMADNF 376
>UNIPROTKB|F1NBP6 [details] [associations]
symbol:F1NBP6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0010369 "chromocenter"
evidence=IEA] [GO:0016235 "aggresome" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:AADN02030565 IPI:IPI00595769
Ensembl:ENSGALT00000009581 Uniprot:F1NBP6
Length = 1025
Score = 137 (53.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 321 NIILNEGGKPLLECQKKIL---CKNRSSTRSQHDSITSDEK--QNDEICSICQYGGELVL 375
N + G LLE +++ C + +S ++ + +N++ C++C GGEL+
Sbjct: 738 NYSCKQSGLSLLESSLQVVGSVCHSSASLLPDSNNCEKEVNTIENEDFCAVCLNGGELLC 797
Query: 376 CDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
CD CP FH SC V L P G W C C
Sbjct: 798 CDHCPKVFHLSCHVPALLSFPVGEWVCTLC 827
Score = 38 (18.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 162 ACKACMDEGLDSKGMVSCNKSPSATTSTKH 191
+C C ++ SCNK +T + +H
Sbjct: 99 SCSMCKEKRPAHSLCTSCNKWLCSTCTEEH 128
>ZFIN|ZDB-GENE-050417-474 [details] [associations]
symbol:zgc:113411 "zgc:113411" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
PROSITE:PS50016 PROSITE:PS50864 SMART:SM00249 SMART:SM00258
ZFIN:ZDB-GENE-050417-474 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 EMBL:BC093591 IPI:IPI00570096
UniGene:Dr.31417 ProteinModelPortal:Q566E8 HOVERGEN:HBG099637
InParanoid:Q566E8 Uniprot:Q566E8
Length = 408
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 356 DEKQNDEICSICQYGGELVLCDDCPSSFHKSCLVLNDLPK---GNWFCPSCCCR-ICGIG 411
D+ ND++C +C G LV CD+CP +FH C L +P+ G W C C + + G
Sbjct: 245 DQHLNDDVCFVCNSEGNLVCCDECPRAFHHHCH-LPAVPEDSSGKWSCIICVLKNMKGSS 303
Query: 412 KRKFEEKTEHSVDDVLRICGQC 433
++ ++ V + C QC
Sbjct: 304 QKNQQDIMSSPVSQYTQHC-QC 324
>UNIPROTKB|C9J9G2 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
HOGENOM:HOG000220810 ChiTaRS:PHF12 IPI:IPI00952567
ProteinModelPortal:C9J9G2 STRING:C9J9G2 Ensembl:ENST00000378879
UCSC:uc002hdh.1 ArrayExpress:C9J9G2 Uniprot:C9J9G2
Length = 705
Score = 127 (49.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S + + + S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 38 KRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 97
Query: 399 FCPSCCCRICGIGKRKFEEKTE 420
C C R ++K E+K E
Sbjct: 98 MCHRCTVR-----RKKREQKKE 114
Score = 44 (20.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCE 465
C C FH+ C+E L +W C + E
Sbjct: 289 CDYCPLLFHMDCLEPP----LTAMPLGRWMCPNHIE 320
>UNIPROTKB|D4AC30 [details] [associations]
symbol:D4AC30 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00781625
Ensembl:ENSRNOT00000035130 ArrayExpress:D4AC30 Uniprot:D4AC30
Length = 786
Score = 127 (49.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S + + +S S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 38 KRSRKPEKESRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 97
Query: 399 FCPSCCCR 406
C C R
Sbjct: 98 MCHRCTVR 105
Score = 45 (20.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 413 RKFEEKTEHSVDDVLRICG-----QCEHN---FHVGCIEKSRAINLNNCSQNKWFCSDGC 464
RK E T H + + R C QC++ FH+ C+E L +W C +
Sbjct: 264 RKLNEITHH-ISFLRRSCRVAPLIQCDYCPLLFHMDCLEPP----LTAMPLGRWMCPNHI 318
Query: 465 E 465
E
Sbjct: 319 E 319
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 124 (48.7 bits), Expect = 0.00043, P = 0.00043
Identities = 26/120 (21%), Positives = 58/120 (48%)
Query: 346 TRSQHDSITSDEKQNDEICSIC---QYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFC 400
T +D SD + + C +C + E +LCD+C + +H CL L +P +W+C
Sbjct: 162 TNCTYDFPESDSEDEYDSCLVCGQHDHPSETLLCDNCDNPYHMKCLNPPLESVPATSWYC 221
Query: 401 PSCCCRICGIGKRKFEEKTE--HSVDDVLRICGQCEHNFHVGCIEKSRAINLNNCSQNKW 458
C + G G+ F+E + +++ + ++C + F + ++ +++++ + W
Sbjct: 222 DKC---LIGTGEYGFDEDVDVKYTIPEFYKMCQDFDAKF-IRDYNQNNPLSVDDIERKFW 277
>UNIPROTKB|F1NX04 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001222 "transcription corepressor binding"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0035091
"phosphatidylinositol binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR001965 InterPro:IPR008984 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00240
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:AADN02025853 IPI:IPI00589363 Ensembl:ENSGALT00000006417
Uniprot:F1NX04
Length = 1007
Score = 130 (50.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S R + + S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 36 KRSRRPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 95
Query: 399 FCPSCCCRICGIGKRKFEEKTE 420
C C R ++K E+K E
Sbjct: 96 MCHRCTVR-----RKKREQKKE 112
Score = 44 (20.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCE 465
C C FH+ C+E L +W C + E
Sbjct: 285 CDYCPLLFHMDCLEPP----LTAMPLGRWMCPNHIE 316
>UNIPROTKB|D5LMF5 [details] [associations]
symbol:zmynd8 "Zinc finger and MYND domain containing
protein 8" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0005634 GO:GO:0007399 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 CTD:23613 InterPro:IPR021931
Pfam:PF12064 EMBL:GU942747 RefSeq:NP_001170911.1 UniGene:Xl.18946
GeneID:733267 KEGG:xla:733267 Xenbase:XB-GENE-6253445
Uniprot:D5LMF5
Length = 1165
Score = 136 (52.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 269 LPEAKVHYRGRNGPLAKGQIRRDGIKCDCCSKVFTLSGFEAH--AGSQKHRPTANIILNE 326
LPE G + G R G K S + +G + S + I++N
Sbjct: 34 LPEGLPQDHGDSQQSNPGSTERPGQKRRFPSPQHSSNGHSPQDSSTSPSKKKKKPIMINS 93
Query: 327 GGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKS 386
K E + + + + + +ND C +C G+++ C+ CP +H
Sbjct: 94 NNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAK 153
Query: 387 CLVLNDLPKGNWFCPSC 403
CL L P+G+WFCP C
Sbjct: 154 CLKLTAEPEGDWFCPEC 170
Score = 39 (18.8 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 10/52 (19%), Positives = 26/52 (50%)
Query: 469 SCLHEILDKPFQLGVDDLTWRLLKSMEVRDHHGPSNSKEMEEALMENQSKLS 520
S + EI + ++ ++ L W + + +H+ EM ++L + + +L+
Sbjct: 1001 STIAEI--RRLRIEIEKLQWLHQQELAEMEHNLELTMAEMRQSLEQERDRLT 1050
Score = 38 (18.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 18/67 (26%), Positives = 29/67 (43%)
Query: 476 DKP-FQLGVD-DLTWRLLKSM--EVRDHHGPSNSKEMEEALMENQSKLSVALDVMHECFE 531
D P +LG+D D L+ + + G + KE +E L + Q S A+ +
Sbjct: 738 DSPTVRLGLDSDSESELVIDLGEDQAGRDGRKHKKEAKETLAKQQESKSPAVSNTSGQPQ 797
Query: 532 PIKDVLT 538
P +LT
Sbjct: 798 PETPILT 804
>MGI|MGI:2152406 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00502 MGI:MGI:2152406 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0010369
EMBL:AJ307670 GeneTree:ENSGT00530000062982 CTD:9866
HOGENOM:HOG000074104 HOVERGEN:HBG057849 KO:K12032 EMBL:AY572455
EMBL:AC124457 IPI:IPI00776191 IPI:IPI00853877 RefSeq:NP_862901.3
UniGene:Mm.183528 ProteinModelPortal:Q924W6 SMR:Q924W6
STRING:Q924W6 PhosphoSite:Q924W6 PRIDE:Q924W6
Ensembl:ENSMUST00000033339 GeneID:330627 KEGG:mmu:330627
InParanoid:Q924W6 NextBio:399482 Bgee:Q924W6 CleanEx:MM_TRIM66
Genevestigator:Q924W6 Uniprot:Q924W6
Length = 1242
Score = 126 (49.4 bits), Expect = 0.00051, P = 0.00051
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+N++ C++C GGEL+ CD CP +H SC V L P G W C C
Sbjct: 994 ENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLC 1040
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 148 (57.2 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 357 EKQND--EICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRI 407
E+++D E C +C+ GGEL+ CD C SS+H CL L D+P G W CP C C +
Sbjct: 509 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPV 563
Score = 144 (55.7 bits), Expect = 0.00053, Sum P(4) = 0.00053
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 351 DSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSC 403
+ + E + + C +CQ GGE++LCD CP ++H CL L+ P+G W CP C
Sbjct: 428 EEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 482
Score = 49 (22.3 bits), Expect = 0.00053, Sum P(4) = 0.00053
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 427 LRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSD-GCEVISSCLHEIL 475
L C C ++H+ C+ L + +W C C V+ + +IL
Sbjct: 527 LLCCDACISSYHIHCLNPP----LPDIPNGEWLCPRCTCPVLKGRVQKIL 572
Score = 39 (18.8 bits), Expect = 0.00053, Sum P(4) = 0.00053
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 590 LMNELEKLLIELGVERLVLPA 610
++N+LE+LL ++ + LPA
Sbjct: 1923 VLNQLEELLSDMKADVTRLPA 1943
Score = 37 (18.1 bits), Expect = 0.00053, Sum P(4) = 0.00053
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 264 DNNGVLPEAKVHYRGRN 280
D+ GVL H RGR+
Sbjct: 47 DDEGVLGRGPGHDRGRD 63
>RGD|1595847 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=ISO] [GO:0016235
"aggresome" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 RGD:1595847 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
GO:GO:0010369 GeneTree:ENSGT00530000062982 IPI:IPI00366002
PRIDE:F1M6Z0 Ensembl:ENSRNOT00000019368 UCSC:RGD:1595847
NextBio:676966 ArrayExpress:F1M6Z0 Uniprot:F1M6Z0
Length = 1307
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+N++ C++C GGEL+ CD CP +H SC V L P G W C C
Sbjct: 1059 ENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLC 1105
>UNIPROTKB|Q9UK53 [details] [associations]
symbol:ING1 "Inhibitor of growth protein 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0010941 "regulation of cell death"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0005634 GO:GO:0045893
GO:GO:0008285 GO:GO:0010941 GO:GO:0030308 GO:GO:0046872
GO:GO:0008270 EMBL:CH471085 GO:GO:0007049 GO:GO:0006606
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035064
InterPro:IPR024610 Pfam:PF12998 EMBL:AF181849 EMBL:AF181850
EMBL:AF001954 EMBL:AF044076 EMBL:AF149721 EMBL:AF149722
EMBL:AF149723 EMBL:AF167551 EMBL:AF167550 EMBL:AF167549
EMBL:AB037387 EMBL:AB037594 EMBL:AB031269 EMBL:AB024401
EMBL:AB024402 EMBL:AB024403 EMBL:AB024404 EMBL:AB024405
EMBL:AJ310392 EMBL:AF078835 EMBL:AF078837 EMBL:AF078836
EMBL:AK302353 EMBL:AL157820 EMBL:BC093942 EMBL:BC093944
IPI:IPI00014324 IPI:IPI00099385 IPI:IPI00385592 IPI:IPI00385608
IPI:IPI00397840 RefSeq:NP_001254657.1 RefSeq:NP_005528.3
RefSeq:NP_937860.1 RefSeq:NP_937861.1 RefSeq:NP_937862.1
UniGene:Hs.46700 UniGene:Hs.508725 PDB:2QIC PDBsum:2QIC
ProteinModelPortal:Q9UK53 SMR:Q9UK53 DIP:DIP-24256N DIP:DIP-24257N
DIP:DIP-24258N IntAct:Q9UK53 STRING:Q9UK53 PhosphoSite:Q9UK53
DMDM:212276438 PRIDE:Q9UK53 Ensembl:ENST00000333219
Ensembl:ENST00000338450 Ensembl:ENST00000375774
Ensembl:ENST00000375775 GeneID:3621 KEGG:hsa:3621 UCSC:uc001vrf.3
UCSC:uc001vrg.3 UCSC:uc001vri.3 CTD:3621 GeneCards:GC13P111365
H-InvDB:HIX0056146 HGNC:HGNC:6062 HPA:CAB016136 HPA:CAB017773
MIM:275355 MIM:601566 neXtProt:NX_Q9UK53 Orphanet:67037
PharmGKB:PA29872 eggNOG:COG5034 HOVERGEN:HBG006607
InParanoid:Q9UK53 OMA:FETCQET PhylomeDB:Q9UK53 ChiTaRS:ING1
EvolutionaryTrace:Q9UK53 GenomeRNAi:3621 NextBio:14163
ArrayExpress:Q9UK53 Bgee:Q9UK53 Genevestigator:Q9UK53
GermOnline:ENSG00000153487 Uniprot:Q9UK53
Length = 422
Score = 120 (47.3 bits), Expect = 0.00054, P = 0.00054
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 328 GKPLLECQKKILCKNRSSTRSQHDSITSDEK--QNDEICSIC-QYG-GELVLCD--DCPS 381
G P + K K RS +++ ++ +D N+ +C Q GE++ CD +CP
Sbjct: 317 GTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPI 376
Query: 382 S-FHKSCLVLNDLPKGNWFCPSC 403
FH SC+ LN PKG W+CP C
Sbjct: 377 EWFHFSCVGLNHKPKGKWYCPKC 399
>ZFIN|ZDB-GENE-080519-3 [details] [associations]
symbol:nsd1a "nuclear receptor binding SET domain
protein 1a" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 ZFIN:ZDB-GENE-080519-3 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 KO:K15588
EMBL:CU633762 EMBL:CU655965 EMBL:CU659412 IPI:IPI00512787
RefSeq:XP_683890.4 UniGene:Dr.83733 Ensembl:ENSDART00000084114
GeneID:556086 KEGG:dre:556086 CTD:556086 NextBio:20881309
ArrayExpress:F1QA79 Bgee:F1QA79 Uniprot:F1QA79
Length = 2055
Score = 144 (55.7 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 327 GGKPLLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKS 386
G PL LC N + R + E N C +C GG L+ C+ CP++FH+
Sbjct: 1361 GSVPL--ANNSFLCPNHFTPRK---GCKNHEHINVSWCFVCSEGGSLLCCESCPAAFHRE 1415
Query: 387 CLVLNDLPKGNWFCPSC 403
CL + ++P+G+WFC C
Sbjct: 1416 CLNI-EMPQGSWFCNDC 1431
Score = 41 (19.5 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 233 AVLRSSKRARSP-ERFASPSNC-KPRTILS 260
++ SKRA SP + ++PS+ K + +LS
Sbjct: 254 SIFNLSKRAHSPSDSHSNPSSSPKKKQLLS 283
Score = 41 (19.5 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 50 SKGVFRYTSPNGNPYLSLSQVCRELGDSVD---DVPSEVS 86
S + SP N +L + GDS D DV EV+
Sbjct: 139 SSDSLEHFSPISNGFLHFDSTLFDSGDSKDNDEDVKGEVA 178
>UNIPROTKB|F1N0T5 [details] [associations]
symbol:ING1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0010941 "regulation of cell
death" evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0005634
GO:GO:0045893 GO:GO:0010941 GO:GO:0046872 GO:GO:0008270
GO:GO:0006606 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR024610 Pfam:PF12998 OMA:FETCQET
GeneTree:ENSGT00550000074538 EMBL:DAAA02034914 IPI:IPI00700671
Ensembl:ENSBTAT00000035341 Uniprot:F1N0T5
Length = 233
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 328 GKPLLECQKKILCKNRSSTRSQHDSITSDEK--QNDEICSIC-QYG-GELVLCD--DCPS 381
G P + K K RS +++ ++ +D N+ +C Q GE++ CD +CP
Sbjct: 128 GTPKEKKAKASKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPI 187
Query: 382 S-FHKSCLVLNDLPKGNWFCPSC 403
FH SC+ L+ PKG W+CP C
Sbjct: 188 EWFHFSCVGLSHKPKGKWYCPKC 210
>WB|WBGene00008081 [details] [associations]
symbol:athp-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00240 SMART:SM00249 SMART:SM00384 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000003 Gene3D:2.60.200.20
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG145066
EMBL:Z73424 HSSP:Q13263 PIR:T19918 RefSeq:NP_499397.2
ProteinModelPortal:Q18605 SMR:Q18605 DIP:DIP-27259N IntAct:Q18605
MINT:MINT-1045880 STRING:Q18605 PaxDb:Q18605 EnsemblMetazoa:C44B9.4
GeneID:176517 KEGG:cel:CELE_C44B9.4 UCSC:C44B9.4 CTD:176517
WormBase:C44B9.4 GeneTree:ENSGT00530000069671 HOGENOM:HOG000021274
InParanoid:Q18605 OMA:IAIQRCL NextBio:892916 Uniprot:Q18605
Length = 1150
Score = 137 (53.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 362 EICSICQYGGELVLCDDCPSSFHKSCLVL--NDLPKGNWFCPSCCCRICGIGKRKFE-EK 418
+IC IC GG ++ C+ CP+SFH +C+ +DLP N++C C R R F EK
Sbjct: 60 QICGICSSGGNILCCEQCPASFHLACIGYESSDLPDDNFYCNRC--RNLPENVRLFPPEK 117
Query: 419 TEHSVDDVLRICGQCEHNF 437
SV+ VLR+ + N+
Sbjct: 118 CSPSVNPVLRVENENHRNW 136
Score = 37 (18.1 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 140 KGNRRELRYTSPSGAVYISLRTAC 163
K RR+L+Y S G + +R C
Sbjct: 6 KEGRRKLKYDSNDGLLP-EIRRVC 28
>UNIPROTKB|Q18605 [details] [associations]
symbol:athp-1 "Protein ATHP-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00240 SMART:SM00249 SMART:SM00384 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000003 Gene3D:2.60.200.20
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG145066
EMBL:Z73424 HSSP:Q13263 PIR:T19918 RefSeq:NP_499397.2
ProteinModelPortal:Q18605 SMR:Q18605 DIP:DIP-27259N IntAct:Q18605
MINT:MINT-1045880 STRING:Q18605 PaxDb:Q18605 EnsemblMetazoa:C44B9.4
GeneID:176517 KEGG:cel:CELE_C44B9.4 UCSC:C44B9.4 CTD:176517
WormBase:C44B9.4 GeneTree:ENSGT00530000069671 HOGENOM:HOG000021274
InParanoid:Q18605 OMA:IAIQRCL NextBio:892916 Uniprot:Q18605
Length = 1150
Score = 137 (53.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 362 EICSICQYGGELVLCDDCPSSFHKSCLVL--NDLPKGNWFCPSCCCRICGIGKRKFE-EK 418
+IC IC GG ++ C+ CP+SFH +C+ +DLP N++C C R R F EK
Sbjct: 60 QICGICSSGGNILCCEQCPASFHLACIGYESSDLPDDNFYCNRC--RNLPENVRLFPPEK 117
Query: 419 TEHSVDDVLRICGQCEHNF 437
SV+ VLR+ + N+
Sbjct: 118 CSPSVNPVLRVENENHRNW 136
Score = 37 (18.1 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 140 KGNRRELRYTSPSGAVYISLRTAC 163
K RR+L+Y S G + +R C
Sbjct: 6 KEGRRKLKYDSNDGLLP-EIRRVC 28
>UNIPROTKB|Q9NQC1 [details] [associations]
symbol:PHF15 "Protein Jade-2" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0043983 "histone H4-K12
acetylation" evidence=IDA] [GO:0043966 "histone H3 acetylation"
evidence=IDA] [GO:0043982 "histone H4-K8 acetylation" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0043966 InterPro:IPR019542
Pfam:PF10513 GO:GO:0043983 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 HOGENOM:HOG000220882 HOVERGEN:HBG053585 EMBL:D87076
EMBL:AK074123 EMBL:BC009307 EMBL:BC021962 EMBL:AJ251833
EMBL:BN000288 IPI:IPI00792658 IPI:IPI00878910 IPI:IPI00884143
RefSeq:NP_056103.4 UniGene:Hs.732155 ProteinModelPortal:Q9NQC1
SMR:Q9NQC1 IntAct:Q9NQC1 STRING:Q9NQC1 DMDM:116242597 PaxDb:Q9NQC1
PRIDE:Q9NQC1 DNASU:23338 Ensembl:ENST00000395003 GeneID:23338
KEGG:hsa:23338 UCSC:uc003kzl.2 UCSC:uc003kzo.1 CTD:23338
GeneCards:GC05P133860 H-InvDB:HIX0005181 HGNC:HGNC:22984
HPA:HPA025959 MIM:610515 neXtProt:NX_Q9NQC1 PharmGKB:PA128394627
PhylomeDB:Q9NQC1 ChiTaRS:PHF15 GenomeRNAi:23338 NextBio:45289
ArrayExpress:Q9NQC1 Bgee:Q9NQC1 CleanEx:HS_PHF15
Genevestigator:Q9NQC1 GermOnline:ENSG00000043143 Uniprot:Q9NQC1
Length = 790
Score = 123 (48.4 bits), Expect = 0.00062, P = 0.00062
Identities = 37/153 (24%), Positives = 62/153 (40%)
Query: 331 LLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQY-----GGELVLCDDCPSSFHK 385
+LE + + LC + + E D +C +C+ G E+V CD C H+
Sbjct: 170 VLE-ELETLCHQNMARAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQ 228
Query: 386 SCLVLNDLPKGNWFCPSCC------CRICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFH 438
+C + +P G+W C +C C +C KR K S + + C
Sbjct: 229 ACYGILKVPTGSWLCRTCALGVQPKCLLCP--KRGGALKPTRSGTKWVHVSCALWIPEVS 286
Query: 439 VGCIEKSRAIN-LNNCSQNKWFCSDGCEVISSC 470
+GC EK I +++ ++W S C + C
Sbjct: 287 IGCPEKMEPITKISHIPASRWALS--CSLCKEC 317
>UNIPROTKB|D3DQA3 [details] [associations]
symbol:PHF15 "PHD finger protein 15, isoform CRA_b"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
SMART:SM00249 EMBL:CH471062 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR019542 Pfam:PF10513 UniGene:Hs.732155 HGNC:HGNC:22984
ChiTaRS:PHF15 EMBL:AC005355 EMBL:AC106763 IPI:IPI00382788
SMR:D3DQA3 Ensembl:ENST00000361895 Ensembl:ENST00000432594
UCSC:uc003kzm.2 Uniprot:D3DQA3
Length = 791
Score = 123 (48.4 bits), Expect = 0.00063, P = 0.00063
Identities = 37/153 (24%), Positives = 62/153 (40%)
Query: 331 LLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQY-----GGELVLCDDCPSSFHK 385
+LE + + LC + + E D +C +C+ G E+V CD C H+
Sbjct: 170 VLE-ELETLCHQNMARAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQ 228
Query: 386 SCLVLNDLPKGNWFCPSCC------CRICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFH 438
+C + +P G+W C +C C +C KR K S + + C
Sbjct: 229 ACYGILKVPTGSWLCRTCALGVQPKCLLCP--KRGGALKPTRSGTKWVHVSCALWIPEVS 286
Query: 439 VGCIEKSRAIN-LNNCSQNKWFCSDGCEVISSC 470
+GC EK I +++ ++W S C + C
Sbjct: 287 IGCPEKMEPITKISHIPASRWALS--CSLCKEC 317
>UNIPROTKB|F6XUE7 [details] [associations]
symbol:SP140 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:MCFSEEV
GeneTree:ENSGT00510000046835 Ensembl:ENSCAFT00000017034
EMBL:AAEX03014424 Uniprot:F6XUE7
Length = 551
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 38/154 (24%), Positives = 70/154 (45%)
Query: 281 GPLAKGQIRRDGIKCDCCSKV----FTLSGFEAHAGSQKHRPTANIILNEGGKPL---LE 333
G L K ++++ G+ C FT FE G + + + + GG PL +E
Sbjct: 284 GMLYKKKLKQ-GVLVRCIQSEDGNWFTPREFEVKGGHARSK-NWRMSVRCGGMPLRWLIE 341
Query: 334 CQ------KKILCKNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSC 387
+ +K K ++ ++ ++++ N + C C+ GGEL CD C SFH+ C
Sbjct: 342 KELLHNPPRKYFRKRKTIPKAHNNTLVDPYLGNSDECETCRDGGELFCCDTCSRSFHEDC 401
Query: 388 LVLN-DLPKGNWFCPSCCCRICGIGKRKFEEKTE 420
+ + + W C C RI +G+++ ++E
Sbjct: 402 HIPPVETERSPWSCTFC--RIESLGRQQCHRESE 433
>UNIPROTKB|F1LXK8 [details] [associations]
symbol:LOC100362634 "Protein LOC100362634" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 SMART:SM00398
SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0033148
GO:GO:0035097 GeneTree:ENSGT00690000101661 IPI:IPI00560982
Ensembl:ENSRNOT00000040635 ArrayExpress:F1LXK8 Uniprot:F1LXK8
Length = 2383
Score = 128 (50.1 bits), Expect = 0.00064, P = 0.00064
Identities = 35/114 (30%), Positives = 49/114 (42%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCC-CRICGIGKRKFE 416
+C +C + L+LCDDC S+H CL L +PKG W C C C CG F
Sbjct: 128 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 187
Query: 417 EKTEHSVDDVLRICGQCEHNF-----HVGCIEKSRAINLNNCSQNKWFCSDGCE 465
+ ++S CG C H +E+ I +C +W + GCE
Sbjct: 188 CEWQNSYTH----CGPCASLVTCPICHAPYVEEDLLIQCRHCE--RWMHA-GCE 234
>UNIPROTKB|Q2TAK2 [details] [associations]
symbol:PHF12 "PHF12 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 UniGene:Hs.444173 HGNC:HGNC:20816
HOVERGEN:HBG057884 ChiTaRS:PHF12 IPI:IPI00952567 EMBL:BC110882
ProteinModelPortal:Q2TAK2 SMR:Q2TAK2 STRING:Q2TAK2
Ensembl:ENST00000577226 UCSC:uc002hdi.1 Bgee:Q2TAK2 Uniprot:Q2TAK2
Length = 849
Score = 127 (49.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S + + + S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 38 KRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 97
Query: 399 FCPSCCCRICGIGKRKFEEKTE 420
C C R ++K E+K E
Sbjct: 98 MCHRCTVR-----RKKREQKKE 114
Score = 44 (20.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCE 465
C C FH+ C+E L +W C + E
Sbjct: 289 CDYCPLLFHMDCLEPP----LTAMPLGRWMCPNHIE 320
>UNIPROTKB|F1RGC2 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:FP102759 Ensembl:ENSSSCT00000015917 Uniprot:F1RGC2
Length = 1238
Score = 125 (49.1 bits), Expect = 0.00065, P = 0.00065
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+N++ C++C GGEL+ CD CP +H SC + L P G+W C C
Sbjct: 990 ENEDFCAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLC 1036
>UNIPROTKB|E1BK85 [details] [associations]
symbol:PHF15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043983 "histone H4-K12 acetylation" evidence=IEA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IEA] [GO:0043981
"histone H4-K5 acetylation" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0000123 "histone acetyltransferase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0043966 InterPro:IPR019542 Pfam:PF10513
GO:GO:0043983 GO:GO:0000123 GO:GO:0043981 GO:GO:0043982
GeneTree:ENSGT00690000101689 OMA:RKARGRT EMBL:DAAA02020342
EMBL:DAAA02020343 IPI:IPI00700520 Ensembl:ENSBTAT00000028903
Uniprot:E1BK85
Length = 829
Score = 123 (48.4 bits), Expect = 0.00066, P = 0.00066
Identities = 37/153 (24%), Positives = 62/153 (40%)
Query: 331 LLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQY-----GGELVLCDDCPSSFHK 385
+LE + + LC + + E D +C +C+ G E+V CD C H+
Sbjct: 168 VLE-ELETLCHQNMARAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQ 226
Query: 386 SCLVLNDLPKGNWFCPSCC------CRICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFH 438
+C + +P G+W C +C C +C KR K S + + C
Sbjct: 227 ACYGILKVPTGSWLCRTCALGVQPKCLLCP--KRGGALKPTRSGTKWVHVSCALWIPEVS 284
Query: 439 VGCIEKSRAIN-LNNCSQNKWFCSDGCEVISSC 470
+GC EK I +++ ++W S C + C
Sbjct: 285 IGCPEKMEPITKISHIPASRWALS--CSLCKEC 315
>UNIPROTKB|G3XAA4 [details] [associations]
symbol:PHF15 "Protein Jade-2" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249 EMBL:CH471062
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR019542 Pfam:PF10513 UniGene:Hs.732155
HGNC:HGNC:22984 ChiTaRS:PHF15 EMBL:AC005355 EMBL:AC106763
ProteinModelPortal:G3XAA4 SMR:G3XAA4 Ensembl:ENST00000282605
ArrayExpress:G3XAA4 Bgee:G3XAA4 Uniprot:G3XAA4
Length = 834
Score = 123 (48.4 bits), Expect = 0.00067, P = 0.00067
Identities = 37/153 (24%), Positives = 62/153 (40%)
Query: 331 LLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQY-----GGELVLCDDCPSSFHK 385
+LE + + LC + + E D +C +C+ G E+V CD C H+
Sbjct: 170 VLE-ELETLCHQNMARAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQ 228
Query: 386 SCLVLNDLPKGNWFCPSCC------CRICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFH 438
+C + +P G+W C +C C +C KR K S + + C
Sbjct: 229 ACYGILKVPTGSWLCRTCALGVQPKCLLCP--KRGGALKPTRSGTKWVHVSCALWIPEVS 286
Query: 439 VGCIEKSRAIN-LNNCSQNKWFCSDGCEVISSC 470
+GC EK I +++ ++W S C + C
Sbjct: 287 IGCPEKMEPITKISHIPASRWALS--CSLCKEC 317
>UNIPROTKB|F1MD96 [details] [associations]
symbol:F1MD96 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:DAAA02040745
EMBL:DAAA02040746 IPI:IPI01003121 Ensembl:ENSBTAT00000027831
Uniprot:F1MD96
Length = 1268
Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 359 QNDEICSICQYGGELVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSC 403
+N++ C++C GGEL+ CD CP +H SC + L P G+W C C
Sbjct: 1020 ENEDFCAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLC 1066
>UNIPROTKB|B3KPL2 [details] [associations]
symbol:PHF15 "Protein Jade-2" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249 EMBL:CH471062
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR019542 Pfam:PF10513
HOGENOM:HOG000220882 HOVERGEN:HBG053585 UniGene:Hs.732155
HGNC:HGNC:22984 ChiTaRS:PHF15 OMA:RKARGRT EMBL:AC005355
EMBL:AC106763 EMBL:AK056471 IPI:IPI00644322 SMR:B3KPL2
STRING:B3KPL2 Ensembl:ENST00000448712 UCSC:uc003kzk.2
Uniprot:B3KPL2
Length = 850
Score = 123 (48.4 bits), Expect = 0.00068, P = 0.00068
Identities = 37/153 (24%), Positives = 62/153 (40%)
Query: 331 LLECQKKILCKNRSSTRSQHDSITSDEKQNDEICSICQY-----GGELVLCDDCPSSFHK 385
+LE + + LC + + E D +C +C+ G E+V CD C H+
Sbjct: 186 VLE-ELETLCHQNMARAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQ 244
Query: 386 SCLVLNDLPKGNWFCPSCC------CRICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFH 438
+C + +P G+W C +C C +C KR K S + + C
Sbjct: 245 ACYGILKVPTGSWLCRTCALGVQPKCLLCP--KRGGALKPTRSGTKWVHVSCALWIPEVS 302
Query: 439 VGCIEKSRAIN-LNNCSQNKWFCSDGCEVISSC 470
+GC EK I +++ ++W S C + C
Sbjct: 303 IGCPEKMEPITKISHIPASRWALS--CSLCKEC 333
>UNIPROTKB|O96028 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003149 "membranous
septum morphogenesis" evidence=IEA] [GO:0003289 "atrial septum
primum morphogenesis" evidence=IEA] [GO:0003290 "atrial septum
secundum morphogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0060348 "bone development" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005737 GO:GO:0005694
GO:GO:0005730 EMBL:CH471131 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0031965 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0009653 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AL132868
GO:GO:0003149 GO:GO:0003290 Orphanet:280 KO:K11424 EMBL:AF071593
EMBL:AF071594 EMBL:AF083386 EMBL:AF083387 EMBL:AF083388
EMBL:AF083389 EMBL:AF083390 EMBL:AF083391 EMBL:AF178206
EMBL:AF178199 EMBL:AF178198 EMBL:AF178202 EMBL:AF178204
EMBL:AF178205 EMBL:AF178203 EMBL:AF178201 EMBL:AF178200
EMBL:AF178219 EMBL:AF178207 EMBL:AF178216 EMBL:AF178215
EMBL:AF178214 EMBL:AF178213 EMBL:AF178212 EMBL:AF178211
EMBL:AF178210 EMBL:AF178209 EMBL:AF178208 EMBL:AF178218
EMBL:AF178217 EMBL:AF330040 EMBL:AY694128 EMBL:AJ007042
EMBL:AB029013 EMBL:AK289697 EMBL:AC105448 EMBL:BC052254
EMBL:BC070176 EMBL:BC094825 EMBL:BC141815 EMBL:BC152412
IPI:IPI00107486 IPI:IPI00107487 IPI:IPI00218240 IPI:IPI00334604
IPI:IPI00470433 IPI:IPI00790144 IPI:IPI00792674
RefSeq:NP_001035889.1 RefSeq:NP_015627.1 RefSeq:NP_579877.1
RefSeq:NP_579878.1 RefSeq:NP_579889.1 RefSeq:NP_579890.1
UniGene:Hs.113876 HSSP:Q9BYU8 ProteinModelPortal:O96028 SMR:O96028
IntAct:O96028 MINT:MINT-7103764 STRING:O96028 PhosphoSite:O96028
PaxDb:O96028 PRIDE:O96028 DNASU:7468 Ensembl:ENST00000312087
Ensembl:ENST00000353275 Ensembl:ENST00000382888
Ensembl:ENST00000382891 Ensembl:ENST00000382892
Ensembl:ENST00000382895 Ensembl:ENST00000398261
Ensembl:ENST00000420906 Ensembl:ENST00000436793
Ensembl:ENST00000503128 Ensembl:ENST00000508803
Ensembl:ENST00000512700 Ensembl:ENST00000514045 GeneID:7468
KEGG:hsa:7468 UCSC:uc003gdx.3 UCSC:uc003gdy.1 UCSC:uc003gdz.4
UCSC:uc003geg.1 UCSC:uc003geh.1 UCSC:uc003gei.4 CTD:7468
GeneCards:GC04P001840 HGNC:HGNC:12766 HPA:HPA015315 HPA:HPA015801
MIM:602952 neXtProt:NX_O96028 PharmGKB:PA37369 HOVERGEN:HBG053345
InParanoid:O96028 OMA:DVKRCVV ChiTaRS:WHSC1 GenomeRNAi:7468
NextBio:29246 ArrayExpress:O96028 Bgee:O96028 Genevestigator:O96028
GermOnline:ENSG00000109685 Uniprot:O96028
Length = 1365
Score = 132 (51.5 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 341 KNRSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDD--CPSSFHKSCLVLNDLPKGNW 398
K + TR + ++Q+++ C C GG+LVLCD C ++H SCL L P G W
Sbjct: 1220 KTKKKTRRRRAK-GEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKW 1278
Query: 399 FCPSCCCRICG 409
CP C +CG
Sbjct: 1279 ECPWHHCDVCG 1289
Score = 43 (20.2 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 58 SPNGNPYLSLSQVCRELGDSVDDVPSEVSHD 88
S + +P SL++ E+ DS D PSE ++
Sbjct: 614 SKSSSPSASLTE--NEVSDSPGDEPSESPYE 642
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 132 (51.5 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C +C G + L+LCD C S+H CL+ L+D+PKG+W CP C + C + F
Sbjct: 313 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLLPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 372
Query: 418 KTEHSVDDVLRICGQCEHNF 437
+ + + D LR G+ F
Sbjct: 373 E-QAARDYTLRTFGEMADAF 391
Score = 44 (20.5 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFC 460
C C FH C+ A++ + S W C
Sbjct: 1194 CELCRDAFHTSCV----AVSSISQSSRIWLC 1220
>UNIPROTKB|F1LM99 [details] [associations]
symbol:F1LM99 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
IPI:IPI00369959 Ensembl:ENSRNOT00000056234 ArrayExpress:F1LM99
Uniprot:F1LM99
Length = 1003
Score = 127 (49.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S + + +S S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 38 KRSRKPEKESRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 97
Query: 399 FCPSCCCR 406
C C R
Sbjct: 98 MCHRCTVR 105
Score = 45 (20.9 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 413 RKFEEKTEHSVDDVLRICG-----QCEHN---FHVGCIEKSRAINLNNCSQNKWFCSDGC 464
RK E T H + + R C QC++ FH+ C+E L +W C +
Sbjct: 264 RKLNEITHH-ISFLRRSCRVAPLIQCDYCPLLFHMDCLEPP----LTAMPLGRWMCPNHI 318
Query: 465 E 465
E
Sbjct: 319 E 319
>WB|WBGene00018013 [details] [associations]
symbol:phf-10 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00530000063194
OMA:CETSSQD EMBL:FO081281 GeneID:3565141 KEGG:cel:CELE_F33E11.6
UCSC:F33E11.6b CTD:3565141 NextBio:955339 RefSeq:NP_001041113.1
ProteinModelPortal:Q2A950 SMR:Q2A950 STRING:Q2A950
EnsemblMetazoa:F33E11.6b WormBase:F33E11.6b InParanoid:Q2A950
ArrayExpress:Q2A950 Uniprot:Q2A950
Length = 447
Score = 119 (46.9 bits), Expect = 0.00077, P = 0.00077
Identities = 29/109 (26%), Positives = 47/109 (43%)
Query: 364 CSICQY-GGELVLCDDCPSSFHKSCLVLND----LPKG-NWFCPSCCCRICGIGKRKFEE 417
C C+ GGE++ C C ++H C+ + + L K W C C R+C I + +E
Sbjct: 335 CDSCEKTGGEMICCATCKIAYHPQCIEMPERMAALVKTYEWSCVDC--RLCSICNKPEKE 392
Query: 418 KTEHSVDDVLRICGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCEV 466
D+++ C +C+ FH C+ L Q W C C +
Sbjct: 393 ------DEIV-FCDRCDRGFHTYCV------GLKKLPQGTWICDTYCAI 428
>UNIPROTKB|J9P801 [details] [associations]
symbol:PHF15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR019542 Pfam:PF10513
GeneTree:ENSGT00690000101689 CTD:23338 EMBL:AAEX03007785
RefSeq:XP_850716.2 Ensembl:ENSCAFT00000044975 GeneID:481508
KEGG:cfa:481508 Uniprot:J9P801
Length = 781
Score = 122 (48.0 bits), Expect = 0.00079, P = 0.00079
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 357 EKQNDEICSICQY-----GGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSCC------C 405
E D +C +C+ G E+V CD C H++C + +P G+W C +C C
Sbjct: 193 EYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPTGSWLCRTCALGVQPKC 252
Query: 406 RICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFHVGCIEKSRAIN-LNNCSQNKWFCSDG 463
+C KR K S + + C +GC EK I +++ ++W S
Sbjct: 253 LLCP--KRGGALKPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKISHIPASRWALS-- 308
Query: 464 CEVISSC 470
C + C
Sbjct: 309 CNLCKEC 315
>POMBASE|SPAC16C9.05 [details] [associations]
symbol:cph1 "Clr6 histone deacetylase associated PHD
protein-1 Cph1" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0019787 "small conjugating protein ligase activity"
evidence=ISM] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
PomBase:SPAC16C9.05 GO:GO:0005829 EMBL:CU329670 GO:GO:0046872
GO:GO:0071276 GO:GO:0071585 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG317492 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 PIR:T37778 RefSeq:NP_593079.1
ProteinModelPortal:Q09819 STRING:Q09819 EnsemblFungi:SPAC16C9.05.1
GeneID:2542318 KEGG:spo:SPAC16C9.05 OrthoDB:EOG4N6053
NextBio:20803379 Uniprot:Q09819
Length = 404
Score = 118 (46.6 bits), Expect = 0.00084, P = 0.00084
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 341 KNRSSTRSQHDSITSDEKQ----NDEICSICQYGGELVLCDDCPSSFHKSCL----VLND 392
K+ T SQ + ++ N + CS C G + C+ CP SFH SCL +
Sbjct: 93 KSHLETESQQTPVKRRRRKATIRNVDYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPEN 152
Query: 393 LPKGNWFCPSC 403
+P+G+WFC +C
Sbjct: 153 IPEGSWFCVTC 163
>UNIPROTKB|J9P3N2 [details] [associations]
symbol:PHF15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR019542 Pfam:PF10513
GeneTree:ENSGT00690000101689 EMBL:AAEX03007785
Ensembl:ENSCAFT00000043964 Uniprot:J9P3N2
Length = 824
Score = 122 (48.0 bits), Expect = 0.00084, P = 0.00084
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 357 EKQNDEICSICQY-----GGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSCC------C 405
E D +C +C+ G E+V CD C H++C + +P G+W C +C C
Sbjct: 193 EYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPTGSWLCRTCALGVQPKC 252
Query: 406 RICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFHVGCIEKSRAIN-LNNCSQNKWFCSDG 463
+C KR K S + + C +GC EK I +++ ++W S
Sbjct: 253 LLCP--KRGGALKPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKISHIPASRWALS-- 308
Query: 464 CEVISSC 470
C + C
Sbjct: 309 CNLCKEC 315
>UNIPROTKB|F1RHC9 [details] [associations]
symbol:PHF15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043983 "histone H4-K12 acetylation" evidence=IEA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IEA] [GO:0043981
"histone H4-K5 acetylation" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0000123 "histone acetyltransferase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0043966 InterPro:IPR019542 Pfam:PF10513
GO:GO:0043983 GO:GO:0000123 GO:GO:0043981 GO:GO:0043982
GeneTree:ENSGT00690000101689 OMA:RKARGRT EMBL:CU862042
Ensembl:ENSSSCT00000015626 Uniprot:F1RHC9
Length = 829
Score = 122 (48.0 bits), Expect = 0.00085, P = 0.00085
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 357 EKQNDEICSICQY-----GGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSCC------C 405
E D +C +C+ G E+V CD C H++C + +P G+W C +C C
Sbjct: 193 EYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPTGSWLCRTCALGVQPKC 252
Query: 406 RICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFHVGCIEKSRAIN-LNNCSQNKWFCSDG 463
+C KR K S + + C +GC EK I +++ ++W S
Sbjct: 253 LLCP--KRGGALKPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKISHIPASRWALS-- 308
Query: 464 CEVISSC 470
C + C
Sbjct: 309 CSLCKEC 315
>CGD|CAL0003038 [details] [associations]
symbol:orf19.6506 species:5476 "Candida albicans" [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IEA]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 CGD:CAL0003038 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACQ01000020 EMBL:AACQ01000016
eggNOG:NOG145066 RefSeq:XP_720831.1 RefSeq:XP_721344.1
RefSeq:XP_888831.1 ProteinModelPortal:Q5AH34 GeneID:3637022
GeneID:3637451 GeneID:3703842 KEGG:cal:CaO19.13859
KEGG:cal:CaO19.6506 KEGG:cal:CaO19_6506 Uniprot:Q5AH34
Length = 688
Score = 121 (47.7 bits), Expect = 0.00086, P = 0.00086
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 350 HDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLNDLPKGNWFCPSCCCRI 407
H+ + K+ND+ C C G + C+ CP SFH +C + + P+ W+C C ++
Sbjct: 259 HEEEEEEVKENDDFCFACGMPGIFICCEKCPKSFHFTCCDPPIEEAPEDEWYCRECYTKV 318
>UNIPROTKB|F1PKD6 [details] [associations]
symbol:PHF15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR019542 Pfam:PF10513
GeneTree:ENSGT00690000101689 OMA:RKARGRT EMBL:AAEX03007785
Ensembl:ENSCAFT00000001570 Uniprot:F1PKD6
Length = 847
Score = 122 (48.0 bits), Expect = 0.00087, P = 0.00087
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 357 EKQNDEICSICQY-----GGELVLCDDCPSSFHKSCLVLNDLPKGNWFCPSCC------C 405
E D +C +C+ G E+V CD C H++C + +P G+W C +C C
Sbjct: 211 EYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPTGSWLCRTCALGVQPKC 270
Query: 406 RICGIGKRKFEEKTEHSVDDVLRI-CGQCEHNFHVGCIEKSRAIN-LNNCSQNKWFCSDG 463
+C KR K S + + C +GC EK I +++ ++W S
Sbjct: 271 LLCP--KRGGALKPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKISHIPASRWALS-- 326
Query: 464 CEVISSC 470
C + C
Sbjct: 327 CNLCKEC 333
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 135 (52.6 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 363 ICSICQYGGE---LVLCDDCPSSFHKSCLV--LNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+C +C G + L+LCD C S+H CLV L+D+PKG+W CP C + C + F
Sbjct: 311 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCLAQECNKPQEAFGF 370
Query: 418 KTEHSVDDVLRICGQCEHNF 437
+ + + D LR G+ F
Sbjct: 371 E-QAARDYTLRTFGEMADAF 389
Score = 40 (19.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFC 460
C C FH C+ A +++ S+ W C
Sbjct: 1192 CELCRDAFHTSCVA---APSISQSSRI-WLC 1218
>UNIPROTKB|E1B7A1 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:DAAA02048610 IPI:IPI00688031 RefSeq:NP_001179060.1
UniGene:Bt.52047 PRIDE:E1B7A1 Ensembl:ENSBTAT00000021255
GeneID:507057 KEGG:bta:507057 NextBio:20867881 Uniprot:E1B7A1
Length = 1004
Score = 127 (49.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S + + + S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 38 KRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 97
Query: 399 FCPSCCCRICGIGKRKFEEKTE 420
C C R ++K E+K E
Sbjct: 98 MCHRCTVR-----RKKREQKKE 114
Score = 44 (20.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCE 465
C C FH+ C+E L +W C + E
Sbjct: 289 CDYCPLLFHMDCLEPP----LTAMPLGRWMCPNHIE 320
>UNIPROTKB|Q96QT6 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001222
"transcription corepressor binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IDA]
[GO:0016580 "Sin3 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 EMBL:CH471159
GO:GO:0001106 GO:GO:0016580 PDB:2LKM PDBsum:2LKM EMBL:AY030283
EMBL:AK024290 EMBL:AK160370 EMBL:BC001657 EMBL:BC121044
EMBL:AB040956 IPI:IPI00290033 IPI:IPI00292750 IPI:IPI00441976
IPI:IPI00607816 RefSeq:NP_001028733.1 RefSeq:NP_065940.1
UniGene:Hs.444173 PDB:2L9S PDBsum:2L9S ProteinModelPortal:Q96QT6
SMR:Q96QT6 DIP:DIP-59632N IntAct:Q96QT6 STRING:Q96QT6
PhosphoSite:Q96QT6 DMDM:71153050 PaxDb:Q96QT6 PRIDE:Q96QT6
Ensembl:ENST00000268756 Ensembl:ENST00000332830 GeneID:57649
KEGG:hsa:57649 UCSC:uc002hdg.1 UCSC:uc002hdj.1 CTD:57649
GeneCards:GC17M027232 H-InvDB:HIX0202392 HGNC:HGNC:20816
HPA:HPA021410 neXtProt:NX_Q96QT6 PharmGKB:PA134954478
eggNOG:NOG145066 HOGENOM:HOG000220810 HOVERGEN:HBG057884
InParanoid:Q96QT6 OMA:MSSQAQG OrthoDB:EOG4VHK63 ChiTaRS:PHF12
EvolutionaryTrace:Q96QT6 GenomeRNAi:57649 NextBio:64390
ArrayExpress:Q96QT6 Bgee:Q96QT6 CleanEx:HS_PHF12
Genevestigator:Q96QT6 GermOnline:ENSG00000109118 Uniprot:Q96QT6
Length = 1004
Score = 127 (49.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S + + + S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 38 KRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 97
Query: 399 FCPSCCCRICGIGKRKFEEKTE 420
C C R ++K E+K E
Sbjct: 98 MCHRCTVR-----RKKREQKKE 114
Score = 44 (20.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCE 465
C C FH+ C+E L +W C + E
Sbjct: 289 CDYCPLLFHMDCLEPP----LTAMPLGRWMCPNHIE 320
>UNIPROTKB|F1RNA4 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:FP236132 RefSeq:XP_003131823.2 UniGene:Ssc.50204
Ensembl:ENSSSCT00000019351 GeneID:100515341 KEGG:ssc:100515341
Uniprot:F1RNA4
Length = 1004
Score = 127 (49.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 343 RSSTRSQHDSITSDEKQNDEICSICQYGGELVLCDDCPSSFHKSCL--VLND--LPKGNW 398
+ S + + + S N + C C+ GG+L+ CD CP++FH C L++ LP G W
Sbjct: 38 KRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEW 97
Query: 399 FCPSCCCRICGIGKRKFEEKTE 420
C C R ++K E+K E
Sbjct: 98 MCHRCTVR-----RKKREQKKE 114
Score = 44 (20.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 430 CGQCEHNFHVGCIEKSRAINLNNCSQNKWFCSDGCE 465
C C FH+ C+E L +W C + E
Sbjct: 289 CDYCPLLFHMDCLEPP----LTAMPLGRWMCPNHIE 320
>UNIPROTKB|E1BNH7 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:DAAA02060851 EMBL:DAAA02060847
EMBL:DAAA02060848 EMBL:DAAA02060849 EMBL:DAAA02060850
IPI:IPI00924282 Ensembl:ENSBTAT00000061245 Uniprot:E1BNH7
Length = 1440
Score = 124 (48.7 bits), Expect = 0.00099, P = 0.00099
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 327 GGKPLLECQKKILCKNRSST-RSQHDSITSDEKQ-NDEICSICQYGGELVLCD--DCPSS 382
G +P C K +++ + + I ++ KQ +++ C C GGELV+CD DC +
Sbjct: 1288 GVRPKSACASTAEEKAKNAKLKPKRRKIKTEPKQLHEDFCFQCGDGGELVMCDRKDCSKA 1347
Query: 383 FHKSCLVLNDLPKGNWFCPSCCCRICGIGKRKFEE 417
+H CL L P G W CP C C F E
Sbjct: 1348 YHLLCLNLPQPPYGKWECPWHQCDECSAAAVAFCE 1382
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 670 657 0.00096 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 231
No. of states in DFA: 622 (66 KB)
Total size of DFA: 409 KB (2196 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.30u 0.07s 59.37t Elapsed: 00:00:02
Total cpu time: 59.33u 0.07s 59.40t Elapsed: 00:00:02
Start: Fri May 10 18:09:41 2013 End: Fri May 10 18:09:43 2013
WARNINGS ISSUED: 1