BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005909
(670 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 155/297 (52%), Gaps = 16/297 (5%)
Query: 338 LSNYSYNDIKKMTNGFKEK--LGTGGYGNVYKGKFPDGRLVAVKVL--EKTSNFSDNFIN 393
L +S +++ ++ F K LG GG+G VYKG+ DG LVAVK L E+T F
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 394 EVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGD-LLSREKENLSLKPARLLEI 452
EV I H N++ L GFC + R L+Y YM NGS+ L R + L + I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 453 ALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP 512
ALG A + YLH+ C+ +I+H D+K N+LLD +F V DFGLAK V
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XAV 195
Query: 513 RGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPD 572
RG IG+IAPE + G S K+DV+ YG++LLE+I + R + +N + D
Sbjct: 196 RGXIGHIAPEYL--STGKSSEKTDVFGYGVMLLELITGQ---RAFDLARLANDDDVMLLD 250
Query: 573 WIYDKLIQPEKEDFVEEE-----DDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLS 624
W+ L + + E V+ + D ++I V L C Q +P +RP M+ VV ML
Sbjct: 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 155/297 (52%), Gaps = 16/297 (5%)
Query: 338 LSNYSYNDIKKMTNGFKEK--LGTGGYGNVYKGKFPDGRLVAVKVL--EKTSNFSDNFIN 393
L +S +++ ++ F K LG GG+G VYKG+ DG LVAVK L E+ F
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 394 EVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGD-LLSREKENLSLKPARLLEI 452
EV I H N++ L GFC + R L+Y YM NGS+ L R + L + I
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 453 ALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP 512
ALG A + YLH+ C+ +I+H D+K N+LLD +F V DFGLAK V
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XAV 203
Query: 513 RGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPD 572
RGTIG+IAPE + G S K+DV+ YG++LLE+I + R + +N + D
Sbjct: 204 RGTIGHIAPEYL--STGKSSEKTDVFGYGVMLLELITGQ---RAFDLARLANDDDVMLLD 258
Query: 573 WIYDKLIQPEKEDFVEEE-----DDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLS 624
W+ L + + E V+ + D ++I V L C Q +P +RP M+ VV ML
Sbjct: 259 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 146/309 (47%), Gaps = 36/309 (11%)
Query: 340 NYSYNDIKKMTNGFKE--------KLGTGGYGNVYKGKFPDGRLVAVKVLEK-----TSN 386
++S+ ++K +TN F E K+G GG+G VYKG + + VAVK L T
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 72
Query: 387 FSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP 446
F E+ + + H N++ LLGF DG L+Y YMPNGSL D LS L
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 447 ARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSV 506
+IA G A+ I +LH E +H DIK N+LLD FT K+SDFGLA+A +
Sbjct: 133 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 507 VTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI----EEKKHLRPT---ET 559
V + GT Y+APE G + KSD+YS+G++LLE+I +H P +
Sbjct: 190 VMXSRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 560 TSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRV 619
E D+I K+ + D M V C+ RP + +V
Sbjct: 247 KEEIEDEEKTIEDYIDKKM---------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 620 VEMLSSASA 628
++L +A
Sbjct: 298 QQLLQEMTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 145/309 (46%), Gaps = 36/309 (11%)
Query: 340 NYSYNDIKKMTNGFKE--------KLGTGGYGNVYKGKFPDGRLVAVKVLEK-----TSN 386
++S+ ++K +TN F E K+G GG+G VYKG + + VAVK L T
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 72
Query: 387 FSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP 446
F E+ + + H N++ LLGF DG L+Y YMPNGSL D LS L
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 447 ARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSV 506
+IA G A+ I +LH E +H DIK N+LLD FT K+SDFGLA+A +
Sbjct: 133 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 507 VTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI----EEKKHLRPT---ET 559
V GT Y+APE G + KSD+YS+G++LLE+I +H P +
Sbjct: 190 VMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 560 TSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRV 619
E D+I K+ + D M V C+ RP + +V
Sbjct: 247 KEEIEDEEKTIEDYIDKKM---------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 620 VEMLSSASA 628
++L +A
Sbjct: 298 QQLLQEMTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 145/309 (46%), Gaps = 36/309 (11%)
Query: 340 NYSYNDIKKMTNGFKE--------KLGTGGYGNVYKGKFPDGRLVAVKVLEK-----TSN 386
++S+ ++K +TN F E K+G GG+G VYKG + + VAVK L T
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 66
Query: 387 FSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP 446
F E+ + + H N++ LLGF DG L+Y YMPNGSL D LS L
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 447 ARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSV 506
+IA G A+ I +LH E +H DIK N+LLD FT K+SDFGLA+A +
Sbjct: 127 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 507 VTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI----EEKKHLRPT---ET 559
V GT Y+APE G + KSD+YS+G++LLE+I +H P +
Sbjct: 184 VMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 240
Query: 560 TSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRV 619
E D+I K+ + D M V C+ RP + +V
Sbjct: 241 KEEIEDEEKTIEDYIDKKM---------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
Query: 620 VEMLSSASA 628
++L +A
Sbjct: 292 QQLLQEMTA 300
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 168/323 (52%), Gaps = 23/323 (7%)
Query: 313 FSEERQNIGDGLNVKQFI--KTYRSALLSNYSYNDIKKMTNGFKEK--LGTGGYGNVYKG 368
+S+ +I D L+ + ++YR L+ D+++ TN F K +G G +G VYKG
Sbjct: 5 YSKATNSINDALSSSYLVPFESYRVPLV------DLEEATNNFDHKFLIGHGVFGKVYKG 58
Query: 369 KFPDGRLVAVKV-LEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMP 427
DG VA+K ++S + F E+ T+ H +++ L+GFC + + LIY+YM
Sbjct: 59 VLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118
Query: 428 NGSLG-DLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPD 486
NG+L L + +S+ + LEI +G A + YLH I+H D+K N+LLD +
Sbjct: 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDEN 175
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLE 546
F PK++DFG++K + +GT+GYI PE F++ G + KSDVYS+G++L E
Sbjct: 176 FVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFE 233
Query: 547 MIEEKKHL---RPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGL 603
++ + + P E + + + ++++ P D + E RK +
Sbjct: 234 VLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPES---LRKFGDTAV 290
Query: 604 WCIQINPKDRPSMTRVVEMLSSA 626
C+ ++ +DRPSM V+ L A
Sbjct: 291 KCLALSSEDRPSMGDVLWKLEYA 313
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 168/323 (52%), Gaps = 23/323 (7%)
Query: 313 FSEERQNIGDGLNVKQFI--KTYRSALLSNYSYNDIKKMTNGFKEK--LGTGGYGNVYKG 368
+S+ +I D L+ + ++YR L+ D+++ TN F K +G G +G VYKG
Sbjct: 5 YSKATNSINDALSSSYLVPFESYRVPLV------DLEEATNNFDHKFLIGHGVFGKVYKG 58
Query: 369 KFPDGRLVAVKV-LEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMP 427
DG VA+K ++S + F E+ T+ H +++ L+GFC + + LIY+YM
Sbjct: 59 VLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118
Query: 428 NGSLG-DLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPD 486
NG+L L + +S+ + LEI +G A + YLH I+H D+K N+LLD +
Sbjct: 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDEN 175
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLE 546
F PK++DFG++K + +GT+GYI PE F++ G + KSDVYS+G++L E
Sbjct: 176 FVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFE 233
Query: 547 MIEEKKHL---RPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGL 603
++ + + P E + + + ++++ P D + E RK +
Sbjct: 234 VLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPES---LRKFGDTAV 290
Query: 604 WCIQINPKDRPSMTRVVEMLSSA 626
C+ ++ +DRPSM V+ L A
Sbjct: 291 KCLALSSEDRPSMGDVLWKLEYA 313
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 116/222 (52%), Gaps = 20/222 (9%)
Query: 340 NYSYNDIKKMTNGFKE--------KLGTGGYGNVYKGKFPDGRLVAVKVLEK-----TSN 386
++S+ ++K +TN F E K G GG+G VYKG + + VAVK L T
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 63
Query: 387 FSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP 446
F E+ + H N++ LLGF DG L+Y Y PNGSL D LS L
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 447 ARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSV 506
+IA G A+ I +LH E +H DIK N+LLD FT K+SDFGLA+A +
Sbjct: 124 HXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 507 VTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
V + GT Y APE G + KSD+YS+G++LLE+I
Sbjct: 181 VXXSRIVGTTAYXAPEALR---GEITPKSDIYSFGVVLLEII 219
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 23/279 (8%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLG 411
K KLG G YG VY+G + L VAVK L++ + + F+ E A + I H N++ LLG
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
C +I E+M G+L D L RE + LL +A ++ A+EYL
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+ +N L+ + KV+DFGL++ + + + G + I + APE N
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTAHAGAKFPIKWTAPESLAYN--KF 187
Query: 532 SGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEED 591
S KSDV+++G+LL E+ T G + P +Y+ L EK+ +E +
Sbjct: 188 SIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDPSQVYELL---EKDYRMERPE 233
Query: 592 DCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
C K+ + C Q NP DRPS + + + E+
Sbjct: 234 GC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 134/278 (48%), Gaps = 23/278 (8%)
Query: 354 KEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
K KLG G YG VY+G + L VAVK L++ + + F+ E A + I H N++ LLG
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C +I E+M G+L D L RE + LL +A ++ A+EYL +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L+ + KV+DFGL++ + + + G + I + APE N S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-TFTAHAGAKFPIKWTAPESLAYN--KFS 188
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDD 592
KSDV+++G+LL E+ T G + P +Y+ L EK+ +E +
Sbjct: 189 IKSDVWAFGVLLWEI-----------ATYGMSPYPGIDPSQVYELL---EKDYRMERPEG 234
Query: 593 CIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
C K+ + C Q NP DRPS + + + E+
Sbjct: 235 C-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 29/295 (9%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 123
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--- 515
A+EYL +H D+ +N L+ + KV+DFGL++ + + T T P G
Sbjct: 124 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAPAGAKFP 176
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIY 575
I + APE N S KSDV+++G+LL E+ T G + +Y
Sbjct: 177 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVY 223
Query: 576 DKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
+ L EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 224 ELL---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 29/295 (9%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 124
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--- 515
A+EYL +H D+ +N L+ + KV+DFGL++ + + T T P G
Sbjct: 125 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAPAGAKFP 177
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIY 575
I + APE N S KSDV+++G+LL E+ T G + +Y
Sbjct: 178 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVY 224
Query: 576 DKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
+ L EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 225 ELL---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 23/296 (7%)
Query: 336 ALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINE 394
A+ NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E
Sbjct: 2 AMDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 61
Query: 395 VATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIAL 454
A + I H N++ LLG C +I E+M G+L D L RE + LL +A
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 120
Query: 455 GVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG 514
++ A+EYL +H D+ +N L+ + KV+DFGL++ + + + G +
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKF 176
Query: 515 TIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWI 574
I + APE N S KSDV+++G+LL E+ T G + +
Sbjct: 177 PIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQV 223
Query: 575 YDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
Y+ L EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 224 YELL---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 122
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 178
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 179 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 225
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 226 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 123
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 124 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTAHAGAKFPIKW 179
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 180 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 226
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 227 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 122
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 178
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 179 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 225
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 226 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 122
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 178
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 179 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 225
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 226 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 122
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 178
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 179 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 225
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 226 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 127
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTAHAGAKFPIKW 183
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 184 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 230
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 231 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 23/279 (8%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLG 411
K KLG G +G VY+G + L VAVK L++ + + F+ E A + I H N++ LLG
Sbjct: 15 MKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
C +I E+M G+L D L RE + LL +A ++ A+EYL
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+ +N L+ + KV+DFGL++ + + + G + I + APE N
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTAHAGAKFPIKWTAPESLAYN--KF 187
Query: 532 SGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEED 591
S KSDV+++G+LL E+ T G + P +Y+ L EK+ +E +
Sbjct: 188 SIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDPSQVYELL---EKDYRMERPE 233
Query: 592 DCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
C K+ + C Q NP DRPS + + + E+
Sbjct: 234 GC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 127
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 183
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 184 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 230
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 231 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 122
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 178
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 179 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 225
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 226 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 138/291 (47%), Gaps = 23/291 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 127
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 183
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 184 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 230
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
EK+ +E + C K+ + C Q NP DRPS + + + E
Sbjct: 231 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 126
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 127 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 182
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 183 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 229
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 230 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 76
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 135
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 136 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 191
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 192 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 238
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 239 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 286
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 124
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 125 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 180
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 181 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 227
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 228 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 138/291 (47%), Gaps = 23/291 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 127
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 183
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 184 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 230
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
EK+ +E + C K+ + C Q NP DRPS + + + E
Sbjct: 231 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 127
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 183
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 184 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 230
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 231 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 9/206 (4%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSD---NFINEVATIGRI 401
DI KEK+G G +G V++ ++ G VAVK+L + ++ F+ EVA + R+
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 402 HHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIE 461
H NI+ +G +++ EY+ GSL LL + L R L +A VA +
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 462 YLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
YLHN I+H D+K N+L+D +T KV DFGL++ + + GT ++AP
Sbjct: 152 YLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA--SXFLXSKXAAGTPEWMAP 208
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEM 547
E+ N KSDVYS+G++L E+
Sbjct: 209 EVLRDEPSN--EKSDVYSFGVILWEL 232
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 23/279 (8%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
F +++G+G +G V+ G + + VA+K +++ S D+FI E + ++ H ++ L G
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C + + L++E+M +G L D L ++ + + LL + L V + YL C ++
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLEEAC---VI 145
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L+ + KVSDFG+ + + + TG + + + +PE+F + S
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF--SFSRYS 202
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDD 592
KSDV+S+G+L+ E+ E K P E S S E + +L +P
Sbjct: 203 SKSDVWSFGVLMWEVFSEGK--IPYENRSNSEVVEDISTGF---RLYKPR---------- 247
Query: 593 CIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEAI 631
+ + + C + P+DRP+ +R++ L+ + +
Sbjct: 248 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 9/206 (4%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSD---NFINEVATIGRI 401
DI KEK+G G +G V++ ++ G VAVK+L + ++ F+ EVA + R+
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 402 HHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIE 461
H NI+ +G +++ EY+ GSL LL + L R L +A VA +
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 462 YLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
YLHN I+H ++K N+L+D +T KV DFGL++ + + ++ GT ++AP
Sbjct: 152 YLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAAGTPEWMAP 208
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEM 547
E+ N KSDVYS+G++L E+
Sbjct: 209 EVLRDEPSN--EKSDVYSFGVILWEL 232
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 8/208 (3%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNFINEVATIGRI 401
Y +I+ ++G+G +G VYKGK+ D + +KV++ T F NEVA + +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 402 HHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIE 461
HVNI+ +G+ + A++ ++ SL L ++ + +L++IA A ++
Sbjct: 90 RHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMD 146
Query: 462 YLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
YLH I+H D+K N+ L T K+ DFGLA SR + P G++ ++AP
Sbjct: 147 YLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 522 EIFMRNLGNP-SGKSDVYSYGMLLLEMI 548
E+ NP S +SDVYSYG++L E++
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELM 231
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 135/281 (48%), Gaps = 23/281 (8%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 122
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H D+ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 178
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 179 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 225
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRV 619
EK+ +E + C K+ + C Q NP DRPS +
Sbjct: 226 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 309
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 368
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H ++ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 369 AMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 424
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 425 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 471
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 472 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 519
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 267
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISS 326
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H ++ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 327 AMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 382
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 383 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 429
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 430 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 477
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 23/292 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATI 398
NY ++++ K KLG G YG VY+G + L VAVK L++ + + F+ E A +
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 270
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
I H N++ LLG C +I E+M G+L D L RE + LL +A ++
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 329
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
A+EYL +H ++ +N L+ + KV+DFGL++ + + + G + I +
Sbjct: 330 AMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKW 385
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE N S KSDV+++G+LL E+ T G + +Y+ L
Sbjct: 386 TAPESLAYN--KFSIKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYELL 432
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
EK+ +E + C K+ + C Q NP DRPS + + + E+
Sbjct: 433 ---EKDYRMERPEGC-PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 137/279 (49%), Gaps = 23/279 (8%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
F +++G+G +G V+ G + + VA+K + + + ++FI E + ++ H ++ L G
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C + + L++E+M +G L D L ++ + + LL + L V + YL C ++
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLEEAC---VI 125
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L+ + KVSDFG+ + + + TG + + + +PE+F + S
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF--SFSRYS 182
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDD 592
KSDV+S+G+L+ E+ E K P E S S E + +L +P
Sbjct: 183 SKSDVWSFGVLMWEVFSEGK--IPYENRSNSEVVEDISTGF---RLYKPR---------- 227
Query: 593 CIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEAI 631
+ + + C + P+DRP+ +R++ L+ + +
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 137/279 (49%), Gaps = 23/279 (8%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
F +++G+G +G V+ G + + VA+K + + + ++FI E + ++ H ++ L G
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C + + L++E+M +G L D L ++ + + LL + L V + YL C ++
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLEEAC---VI 128
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L+ + KVSDFG+ + + + TG + + + +PE+F + S
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF--SFSRYS 185
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDD 592
KSDV+S+G+L+ E+ E K P E S S E + +L +P
Sbjct: 186 SKSDVWSFGVLMWEVFSEGK--IPYENRSNSEVVEDISTGF---RLYKPR---------- 230
Query: 593 CIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEAI 631
+ + + C + P+DRP+ +R++ L+ + +
Sbjct: 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 137/279 (49%), Gaps = 23/279 (8%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
F +++G+G +G V+ G + + VA+K + + + ++FI E + ++ H ++ L G
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C + + L++E+M +G L D L ++ + + LL + L V + YL C ++
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLEEAC---VI 123
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L+ + KVSDFG+ + + + TG + + + +PE+F + S
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF--SFSRYS 180
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDD 592
KSDV+S+G+L+ E+ E K P E S S E + +L +P
Sbjct: 181 SKSDVWSFGVLMWEVFSEGK--IPYENRSNSEVVEDISTGF---RLYKPR---------- 225
Query: 593 CIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEAI 631
+ + + C + P+DRP+ +R++ L+ + +
Sbjct: 226 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 264
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 139/279 (49%), Gaps = 23/279 (8%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
F +++G+G +G V+ G + + VA+K + + + ++FI E + ++ H ++ L G
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C + + L++E+M +G L D L ++ + + LL + L V + YL E ++
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLE---EASVI 125
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L+ + KVSDFG+ + + + TG + + + +PE+F + S
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF--SFSRYS 182
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDD 592
KSDV+S+G+L+ E+ E K P E S S E + +L +P
Sbjct: 183 SKSDVWSFGVLMWEVFSEGK--IPYENRSNSEVVEDISTGF---RLYKPR---------- 227
Query: 593 CIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEAI 631
+ + + C + P+DRP+ +R++ L++ +A +
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAASGL 266
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 128/266 (48%), Gaps = 23/266 (8%)
Query: 354 KEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
K KLG G YG VY G + L VAVK L++ + + F+ E A + I H N++ LLG
Sbjct: 37 KHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C ++ EYMP G+L D L RE + LL +A ++ A+EYL +
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAMEYLEKK---NFI 152
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L+ + KV+DFGL++ + + + G + I + APE N S
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN--TFS 209
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDD 592
KSDV+++G+LL E+ T G + +YD L EK +E+ +
Sbjct: 210 IKSDVWAFGVLLWEI-----------ATYGMSPYPGIDLSQVYDLL---EKGYRMEQPEG 255
Query: 593 CIARKMIIVGLWCIQINPKDRPSMTR 618
C + ++ C + +P DRPS
Sbjct: 256 CPPKVYELMRA-CWKWSPADRPSFAE 280
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 23/279 (8%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
F +++G+G +G V+ G + + VA+K + + + ++FI E + ++ H ++ L G
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C + + L+ E+M +G L D L ++ + + LL + L V + YL C ++
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLEEAC---VI 126
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L+ + KVSDFG+ + + + TG + + + +PE+F + S
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF--SFSRYS 183
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDD 592
KSDV+S+G+L+ E+ E K P E S S E + +L +P
Sbjct: 184 SKSDVWSFGVLMWEVFSEGK--IPYENRSNSEVVEDISTGF---RLYKPR---------- 228
Query: 593 CIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEAI 631
+ + + C + P+DRP+ +R++ L+ + +
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 18 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + +K +L++IA A ++YLH I
Sbjct: 76 YSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLHAKS---I 129
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 190 YSFQSDVYAFGIVLYELM 207
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + +K +L++IA A ++YLH I
Sbjct: 88 YST-APQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLHAKS---I 141
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 202 YSFQSDVYAFGIVLYELM 219
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + +K +L++IA A ++YLH I
Sbjct: 88 YSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLHAKS---I 141
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 202 YSFQSDVYAFGIVLYELM 219
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 41 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + + +L++IA A ++YLH I
Sbjct: 99 YSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 152
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 213 YSFQSDVYAFGIVLYELM 230
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + + +L++IA A ++YLH I
Sbjct: 72 YST-APQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 186 YSFQSDVYAFGIVLYELM 203
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 16 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + + +L++IA A ++YLH I
Sbjct: 74 YSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 127
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 188 YSFQSDVYAFGIVLYELM 205
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 34 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + + +L++IA A ++YLH I
Sbjct: 92 YSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 145
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 206 YSFQSDVYAFGIVLYELM 223
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + + +L++IA A ++YLH I
Sbjct: 77 YSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 130
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 191 YSFQSDVYAFGIVLYELM 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + + +L++IA A ++YLH I
Sbjct: 72 YSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 186 YSFQSDVYAFGIVLYELM 203
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + + +L++IA A ++YLH I
Sbjct: 100 YSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 153
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 214 YSFQSDVYAFGIVLYELM 231
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + + +L++IA A ++YLH I
Sbjct: 77 YSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 130
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 191 YSFQSDVYAFGIVLYELM 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + + +L++IA A ++YLH I
Sbjct: 100 YSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 153
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 214 YSFQSDVYAFGIVLYELM 231
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+++G+G +G VYKGK+ VAVK+L T+ F NEV + + HVNI+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ A++ ++ SL L + + +L++IA A ++YLH I
Sbjct: 72 YSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+K N+ L D T K+ DFGLA SR G+I ++APE+ NP
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 532 -SGKSDVYSYGMLLLEMI 548
S +SDVY++G++L E++
Sbjct: 186 YSFQSDVYAFGIVLYELM 203
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 10/215 (4%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
F ++LGTG +G V GK+ VA+K++++ S D FI E + + H ++ L G
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C +I EYM NG L + L + + +LLE+ V A+EYL + + L
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFL 126
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L++ KVSDFGL++ + + + G + + + PE+ M + S
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYS--KFS 183
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
KSD++++G+L+ E+ K P E + S T E
Sbjct: 184 SKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAE 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 10/215 (4%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
F ++LGTG +G V GK+ VA+K++++ S D FI E + + H ++ L G
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C +I EYM NG L + L + + +LLE+ V A+EYL + + L
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFL 122
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L++ KVSDFGL++ + + + G + + + PE+ M + S
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYS--KFS 179
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
KSD++++G+L+ E+ K P E + S T E
Sbjct: 180 SKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAE 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 10/215 (4%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
F ++LGTG +G V GK+ VA+K++++ S D FI E + + H ++ L G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C +I EYM NG L + L + + +LLE+ V A+EYL + + L
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L++ KVSDFGL++ + + + G + + + PE+ M + S
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYS--KFS 184
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
KSD++++G+L+ E+ K P E + S T E
Sbjct: 185 SKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAE 217
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 10/215 (4%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
F ++LGTG +G V GK+ VA+K++++ S D FI E + + H ++ L G
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C +I EYM NG L + L + + +LLE+ V A+EYL + + L
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFL 133
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L++ KVSDFGL++ + + + G + + + PE+ M + S
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYS--KFS 190
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
KSD++++G+L+ E+ K P E + S T E
Sbjct: 191 SKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAE 223
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 10/215 (4%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
F ++LGTG +G V GK+ VA+K++++ S D FI E + + H ++ L G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
C +I EYM NG L + L + + +LLE+ V A+EYL + + L
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+ +N L++ KVSDFGL++ + + + G + + + PE+ M + S
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPPEVLMYS--KFS 184
Query: 533 GKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
KSD++++G+L+ E+ K P E + S T E
Sbjct: 185 SKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAE 217
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 12/223 (5%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
D K +T F ++LGTG +G V GK+ VA+K++++ S D FI E + + H
Sbjct: 22 DPKDLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 79
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L G C +I EYM NG L + L + + +LLE+ V A+EYL
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLE 137
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ + LH D+ +N L++ KVSDFGL++ + + + G + + + PE+
Sbjct: 138 SK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVL 193
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
M + S KSD++++G+L+ E+ K P E + S T E
Sbjct: 194 MYS--KFSSKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAE 232
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 12/223 (5%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
D K +T F ++LGTG +G V GK+ VA+K++++ S D FI E + + H
Sbjct: 22 DPKDLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 79
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L G C +I EYM NG L + L + + +LLE+ V A+EYL
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLE 137
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ + LH D+ +N L++ KVSDFGL++ + + + G + + + PE+
Sbjct: 138 SK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEETSSVGSKFPVRWSPPEVL 193
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
M + S KSD++++G+L+ E+ K P E + S T E
Sbjct: 194 MYS--KFSSKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAE 232
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 109/204 (53%), Gaps = 8/204 (3%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++K+ ++LG+G +G V GK+ VAVK++++ S D F E T+ ++ H
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ G C ++ EY+ NG L + L + L+P++LLE+ V + +L
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLE 121
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ + +H D+ +N L+D D KVSDFG+ + + + V+ G + + + APE+F
Sbjct: 122 SH---QFIHRDLAARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVF 177
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMI 548
+ S KSDV+++G+L+ E+
Sbjct: 178 --HYFKYSSKSDVWAFGILMWEVF 199
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 27/274 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 75 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 133 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI 188
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 189 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 238
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSM 616
D+C ++ L C + P+DRP+
Sbjct: 239 --------DNCPEELYQLMRL-CWKERPEDRPTF 263
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 27/273 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 71 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 129 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI 184
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 185 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 234
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPS 615
D+C ++ L C + P+DRP+
Sbjct: 235 --------DNCPEELYQLMRL-CWKERPEDRPT 258
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 27/274 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 77 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 135 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI 190
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 191 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 240
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSM 616
D+C ++ L C + P+DRP+
Sbjct: 241 --------DNCPEELYQLMRL-CWKERPEDRPTF 265
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 27/273 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 78 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 136 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI 191
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 192 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 241
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPS 615
D+C ++ L C + P+DRP+
Sbjct: 242 --------DNCPEELYQLMRL-CWKERPEDRPT 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 27/273 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 70 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 128 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI 183
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 184 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 233
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPS 615
D+C ++ L C + P+DRP+
Sbjct: 234 --------DNCPEELYQLMRL-CWKERPEDRPT 257
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 27/273 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 69 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 127 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI 182
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 232
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPS 615
D+C ++ L C + P+DRP+
Sbjct: 233 --------DNCPEELYQLMRL-CWKERPEDRPT 256
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 27/274 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 69 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 127 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI 182
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 232
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSM 616
D+C ++ L C + P+DRP+
Sbjct: 233 --------DNCPEELYQLMRL-CWKERPEDRPTF 257
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 27/274 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 75 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 133 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAI 188
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 189 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 238
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSM 616
D+C ++ L C + P+DRP+
Sbjct: 239 --------DNCPEELYQLMRL-CWKERPEDRPTF 263
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 27/274 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 74 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 132 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAI 187
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 188 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 237
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSM 616
D+C ++ L C + P+DRP+
Sbjct: 238 --------DNCPEELYQLMRL-CWKERPEDRPTF 262
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 27/274 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 69 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 127 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAI 182
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 232
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSM 616
D+C ++ L C + P+DRP+
Sbjct: 233 --------DNCPEELYQLMRL-CWKERPEDRPTF 257
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 27/273 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 79 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 137 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAI 192
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 193 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 242
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPS 615
D+C ++ L C + P+DRP+
Sbjct: 243 --------DNCPEELYQLMRL-CWKERPEDRPT 266
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 27/273 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 64 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 122 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAI 177
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 178 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 227
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPS 615
D+C ++ L C + P+DRP+
Sbjct: 228 --------DNCPEELYQLMRL-CWKERPEDRPT 251
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 27/273 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G +G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 65 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H +++ N+L+ + K++DFGLA+ N G + I + APE
Sbjct: 123 ---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAI 178
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 179 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 228
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPS 615
D+C ++ L C + P+DRP+
Sbjct: 229 --------DNCPEELYQLMRL-CWKERPEDRPT 252
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLLG 411
EK+G G YG VYK K GR+VA+K + + I E++ + +HH NI+ L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCEL 469
L++E+M L +L K L + L ++ GVAH ++
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH------- 138
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
RILH D+KPQN+L++ D K++DFGLA+A V + T T+ Y AP++ M +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMGS-K 195
Query: 530 NPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EMI K
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 34/276 (12%)
Query: 354 KEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+E +G G +G V K K+ + VA+K +E S FI E+ + R++H NI+ L G C
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ L+ EY GSL ++L + A + L + + YLH+ ++H
Sbjct: 72 LN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 474 LDIKPQNVLLDPDFTP-KVSDFGLA---KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
D+KP N+LL T K+ DFG A + H MT +G+ ++APE+F +
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDIQTH--------MTNNKGSAAWMAPEVFEGS-- 179
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDW-IYDKLIQPEKEDFVE 588
N S K DV+S+G++L E+I +K P + G A+ W +++ P ++ +
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRK---PFDEIGGP----AFRIMWAVHNGTRPPLIKNLPK 232
Query: 589 EEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLS 624
+ + R C +P RPSM +V++++
Sbjct: 233 PIESLMTR--------CWSKDPSQRPSMEEIVKIMT 260
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
++ + T E+LG G G V+ G + VAVK L++ S D F+ E + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I EYM NGSL D L + + L +LL++A +A + ++
Sbjct: 69 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
E +H D++ N+L+ + K++DFGLA+ + G + I + APE
Sbjct: 127 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDAEXTAREGAKFPIKWTAPEAI 182
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG--SNTTEAYFPDWIYDKLIQPE 582
N G + KSDV+S+G+LL E++ + P T N Y ++++P
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRP- 232
Query: 583 KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPS 615
D+C ++ L C + P+DRP+
Sbjct: 233 --------DNCPEELYQLMRL-CWKERPEDRPT 256
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLLG 411
EK+G G YG VYK K GR+VA+K + + I E++ + +HH NI+ L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCEL 469
L++E+M L +L K L + L ++ GVAH ++
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH------- 138
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
RILH D+KPQN+L++ D K++DFGLA+A V + T T+ Y AP++ M +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMGS-K 195
Query: 530 NPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EMI K
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 34/276 (12%)
Query: 354 KEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+E +G G +G V K K+ + VA+K +E S FI E+ + R++H NI+ L G C
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ L+ EY GSL ++L + A + L + + YLH+ ++H
Sbjct: 71 LN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 474 LDIKPQNVLLDPDFTP-KVSDFGLA---KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
D+KP N+LL T K+ DFG A + H MT +G+ ++APE+F +
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTH--------MTNNKGSAAWMAPEVFEGS-- 178
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDW-IYDKLIQPEKEDFVE 588
N S K DV+S+G++L E+I +K P + G A+ W +++ P ++ +
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRK---PFDEIGGP----AFRIMWAVHNGTRPPLIKNLPK 231
Query: 589 EEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLS 624
+ + R C +P RPSM +V++++
Sbjct: 232 PIESLMTR--------CWSKDPSQRPSMEEIVKIMT 259
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 134/298 (44%), Gaps = 49/298 (16%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVL-----EKTSNFSDNFINEVATIG 399
D ++T +E +G GG+G VY+ F G VAVK E S +N E
Sbjct: 5 DFAELT--LEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 400 RIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHA 459
+ H NII L G C L+ E+ G L +LS ++ + P L+ A+ +A
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR----IPPDILVNWAVQIARG 117
Query: 460 IEYLHNGCELRILHLDIKPQNVLL-----DPDFTP---KVSDFGLAKAHSRNRSVVTMTG 511
+ YLH+ + I+H D+K N+L+ + D + K++DFGLA+ R T
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT----TKMS 173
Query: 512 PRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFP 571
G ++APE+ ++ S SDV+SYG+LL E++ + R + + +
Sbjct: 174 AAGAYAWMAPEVIRASMF--SKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA---- 227
Query: 572 DWIYDKLIQPE----KEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
+KL P E F + +DC W +P RPS T +++ L++
Sbjct: 228 ---MNKLALPIPSTCPEPFAKLMEDC----------W--NPDPHSRPSFTNILDQLTT 270
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 7/212 (3%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
++LG G +G V+ G + + VAVK L+ + F+ E + + H ++ L
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 415 DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHL 474
+I EYM GSL D L ++ L P +L++ + +A + Y+ +H
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLP-KLIDFSAQIAEGMAYIERK---NYIHR 134
Query: 475 DIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGK 534
D++ NVL+ K++DFGLA+ N G + I + APE N G + K
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAI--NFGCFTIK 191
Query: 535 SDVYSYGMLLLEMIEEKKHLRPTETTSGSNTT 566
SDV+S+G+LL E++ K P T + T
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYPGRTNADVMTA 223
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 33/276 (11%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P R + V + + ++D +F++E + +G+ H NIIHL
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G +I EYM NGSL L + ++ +L+ + G+ ++YL + +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSD---MS 151
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFG+++ + + T G + I + APE I R
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVE 588
+ SDV+SYG+++ E++ + RP S + +A + +L P
Sbjct: 212 ---TSASDVWSYGIVMWEVMSYGE--RPYWDMSNQDVIKAIEEGY---RLPPPM------ 257
Query: 589 EEDDC-IARKMIIVGLWCIQINPKDRPSMTRVVEML 623
DC IA +++ W Q DRP ++V ML
Sbjct: 258 ---DCPIALHQLMLDCW--QKERSDRPKFGQIVNML 288
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 33/276 (11%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P R + V + + ++D +F++E + +G+ H NIIHL
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G +I EYM NGSL L + ++ +L+ + G+ ++YL + +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSD---MS 136
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFG+++ + + T G + I + APE I R
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVE 588
+ SDV+SYG+++ E++ + RP S + +A + +L P
Sbjct: 197 ---TSASDVWSYGIVMWEVMSYGE--RPYWDMSNQDVIKAIEEGY---RLPPPM------ 242
Query: 589 EEDDC-IARKMIIVGLWCIQINPKDRPSMTRVVEML 623
DC IA +++ W Q DRP ++V ML
Sbjct: 243 ---DCPIALHQLMLDCW--QKERSDRPKFGQIVNML 273
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 33/276 (11%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P R + V + + ++D +F++E + +G+ H NIIHL
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G +I EYM NGSL L + ++ +L+ + G+ ++YL + +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSD---MS 130
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFG+++ + + T G + I + APE I R
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVE 588
+ SDV+SYG+++ E++ + RP S + +A + +L P
Sbjct: 191 ---TSASDVWSYGIVMWEVMSYGE--RPYWDMSNQDVIKAIEEGY---RLPPPM------ 236
Query: 589 EEDDC-IARKMIIVGLWCIQINPKDRPSMTRVVEML 623
DC IA +++ W Q DRP ++V ML
Sbjct: 237 ---DCPIALHQLMLDCW--QKERSDRPKFGQIVNML 267
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 113/220 (51%), Gaps = 18/220 (8%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P R VAV + +++ +F+ E + +G+ H N++HL
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G G ++ E+M NG+L L + ++ +L+ + G+A + YL ++
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--IQLVGMLRGIAAGMRYL---ADMG 165
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFGL++ + +V T TG + + + APE I R
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEA 568
+ SDV+SYG+++ E++ + RP S + +A
Sbjct: 226 ---TSASDVWSYGIVMWEVMSYGE--RPYWDMSNQDVIKA 260
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+KLG G +G V+ G + + VAVK L+ + F+ E + + H ++ L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 415 DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHL 474
+I E+M GSL D L ++ L P +L++ + +A + Y+ +H
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP-KLIDFSAQIAEGMAYIERK---NYIHR 133
Query: 475 DIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGK 534
D++ NVL+ K++DFGLA+ N G + I + APE N G + K
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGCFTIK 190
Query: 535 SDVYSYGMLLLEMIEEKKHLRPTETTS 561
S+V+S+G+LL E++ K P T +
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYPGRTNA 217
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 18/205 (8%)
Query: 354 KEKLGTGGYGNVYKG--KFPDGR--LVAVKVLEK--TSNFSDNFINEVATIGRIHHVNII 407
++ +G G +G V G K P R VA+K L+ T +F++E + +G+ H N+I
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
HL G + +I E+M NGSL L + ++ +L+ + G+A ++YL
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---A 152
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG---TIGYIAPE-I 523
++ +H D+ +N+L++ + KVSDFGL++ + S T T G I + APE I
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
R + SDV+SYG+++ E++
Sbjct: 213 QYRKF---TSASDVWSYGIVMWEVM 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 8/194 (4%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
++LG G +G V+ G + VA+K L+ + ++F+ E + ++ H ++ L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 415 DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHL 474
+ ++ EYM GSL D L ++ E +LK L+++A VA + Y+ + +H
Sbjct: 75 EEPI-YIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHR 129
Query: 475 DIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGK 534
D++ N+L+ K++DFGLA+ N G + I + APE + G + K
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAAL--YGRFTIK 186
Query: 535 SDVYSYGMLLLEMI 548
SDV+S+G+LL E++
Sbjct: 187 SDVWSFGILLTELV 200
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 17/201 (8%)
Query: 357 LGTGGYGNVYKG--KFPDGRL---VAVKVLEK--TSNFSDNFINEVATIGRIHHVNIIHL 409
+G G +G VYKG K G+ VA+K L+ T +F+ E +G+ H NII L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
G +I EYM NG+L L REK+ +L+ + G+A ++YL N +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFL-REKDG-EFSVLQLVGMLRGIAAGMKYLAN---M 166
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRN 527
+H D+ +N+L++ + KVSDFGL++ + + T +G + I + APE I R
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
+ SDV+S+G+++ E++
Sbjct: 227 F---TSASDVWSFGIVMWEVM 244
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 18/223 (8%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G+G G V G+ P R V V + + +++ +F++E + +G+ H NII L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G G ++ EYM NGSL L ++ +L+ + GV + YL +L
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLG 171
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +NVL+D + KVSDFGL++ + + T TG + I + APE I R
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTF 231
Query: 529 GNPSGKSDVYSYGMLLLEMIE--EKKHLRPTETTSGSNTTEAY 569
S SDV+S+G+++ E++ E+ + T S+ E Y
Sbjct: 232 ---SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 129
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQ-GAKFPIKWTAPEAAL--YGRFTIKS 186
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 187 DVWSFGILLTEL 198
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 35/277 (12%)
Query: 357 LGTGGYGNVYKG--KFPDGRL--VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P R VA+K L+ T +F+ E + +G+ H NIIHL
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G ++ EYM NGSL L + ++ +L+ + G++ ++YL ++
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--IQLVGMLRGISAGMKYL---SDMG 144
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFGL++ + + T G + I + APE I R
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 529 GNPSGKSDVYSYGMLLLEMIE--EKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ SDV+SYG+++ E++ E+ + T E Y +L P
Sbjct: 205 ---TSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGY-------RLPSPM---- 250
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
DC A + + L C Q RP +V ML
Sbjct: 251 -----DCPA-ALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 18/223 (8%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G+G G V G+ P R V V + + +++ +F++E + +G+ H NII L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G G ++ EYM NGSL L ++ +L+ + GV + YL +L
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLG 171
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +NVL+D + KVSDFGL++ + + T TG + I + APE I R
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF 231
Query: 529 GNPSGKSDVYSYGMLLLEMIE--EKKHLRPTETTSGSNTTEAY 569
S SDV+S+G+++ E++ E+ + T S+ E Y
Sbjct: 232 ---SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 36/227 (15%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL---VAVKVLEKTSNFSD--NFINEVAT 397
+NDIK F++ +G G +G V K + L A+K +++ ++ D +F E+
Sbjct: 24 WNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 398 IGRI-HHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA--------- 447
+ ++ HH NII+LLG C L EY P+G+L D L R+ L PA
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTAS 137
Query: 448 -----RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSR 502
+LL A VA ++YL + + +H D+ +N+L+ ++ K++DFGL SR
Sbjct: 138 TLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGL----SR 190
Query: 503 NRSV-VTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
+ V V T R + ++A E N + SDV+SYG+LL E++
Sbjct: 191 GQEVYVKKTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 235
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 17/200 (8%)
Query: 357 LGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSDN--FINEVATIGRIHHVNIIHL 409
LG+G +G VYKG + P+G V A+K+L +T+ N F++E + + H +++ L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
LG C T L+ + MP+G L + + K+N+ + LL + +A + YL E
Sbjct: 83 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQ--LLLNWCVQIAKGMMYLE---ER 136
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE-IFMRNL 528
R++H D+ +NVL+ K++DFGLA+ + G + I ++A E I R
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ +SDV+SYG+ + E++
Sbjct: 197 ---THQSDVWSYGVTIWELM 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 305
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 362
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 363 DVWSFGILLTEL 374
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 305
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 362
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 363 DVWSFGILLTEL 374
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 36/227 (15%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL---VAVKVLEKTSNFSD--NFINEVAT 397
+NDIK F++ +G G +G V K + L A+K +++ ++ D +F E+
Sbjct: 14 WNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 398 IGRI-HHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA--------- 447
+ ++ HH NII+LLG C L EY P+G+L D L R+ L PA
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTAS 127
Query: 448 -----RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSR 502
+LL A VA ++YL + + +H D+ +N+L+ ++ K++DFGL SR
Sbjct: 128 TLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGL----SR 180
Query: 503 NRSV-VTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
+ V V T R + ++A E N + SDV+SYG+LL E++
Sbjct: 181 GQEVYVKKTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 225
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + +I H ++ L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 196
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 197 DVWSFGILLTEL 208
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 152/328 (46%), Gaps = 46/328 (14%)
Query: 315 EERQNIGDGLNVKQFIKTYRSALLSNYSYNDIKKMTNGFKEKL-----------GTGGYG 363
E+R + G+G ++TY + ++Y D + + F ++L G G +G
Sbjct: 4 EKRLHFGNGHLKLPGLRTY----VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFG 59
Query: 364 NVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLLGFCCDGS 417
V G K P + ++V + +++ +F+ E + +G+ H NII L G
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 418 TRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIK 477
++ EYM NGSL L + ++ +L+ + G+A ++YL ++ +H D+
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 478 PQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNLGNPSGKS 535
+N+L++ + KVSDFGL++ + + T G + I + +PE I R + S
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSAS 231
Query: 536 DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIA 595
DV+SYG++L E++ + RP S + +A + +L P DC A
Sbjct: 232 DVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKAVDEGY---RLPPPM---------DCPA 277
Query: 596 RKMIIVGLWCIQINPKDRPSMTRVVEML 623
+ + L C Q + +RP ++V +L
Sbjct: 278 -ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 152/328 (46%), Gaps = 46/328 (14%)
Query: 315 EERQNIGDGLNVKQFIKTYRSALLSNYSYNDIKKMTNGFKEKL-----------GTGGYG 363
E+R + G+G ++TY + ++Y D + + F ++L G G +G
Sbjct: 2 EKRLHFGNGHLKLPGLRTY----VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFG 57
Query: 364 NVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLLGFCCDGS 417
V G K P + ++V + +++ +F+ E + +G+ H NII L G
Sbjct: 58 EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 117
Query: 418 TRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIK 477
++ EYM NGSL L + ++ +L+ + G+A ++YL ++ +H D+
Sbjct: 118 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 172
Query: 478 PQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNLGNPSGKS 535
+N+L++ + KVSDFGL++ + + T G + I + +PE I R + S
Sbjct: 173 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSAS 229
Query: 536 DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIA 595
DV+SYG++L E++ + RP S + +A + +L P DC A
Sbjct: 230 DVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKAVDEGY---RLPPPM---------DCPA 275
Query: 596 RKMIIVGLWCIQINPKDRPSMTRVVEML 623
+ + L C Q + +RP ++V +L
Sbjct: 276 -ALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
+I EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 85 EPIYIVI-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAAL--YGRFTIKS 196
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 197 DVWSFGILLTEL 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 77 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 129
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R+ ++ GT+ Y+ PE+ +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS-----GTLDYLPPEMIEGRMH 184
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 185 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 230
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 231 TEGARDLISR--------LLKHNPSQRPMLREVLE 257
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 17/200 (8%)
Query: 357 LGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSDN--FINEVATIGRIHHVNIIHL 409
LG+G +G VYKG + P+G V A+K+L +T+ N F++E + + H +++ L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
LG C T L+ + MP+G L + + K+N+ + LL + +A + YL E
Sbjct: 106 LGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQ--LLLNWCVQIAKGMMYLE---ER 159
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE-IFMRNL 528
R++H D+ +NVL+ K++DFGLA+ + G + I ++A E I R
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 219
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ +SDV+SYG+ + E++
Sbjct: 220 ---THQSDVWSYGVTIWELM 236
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 132
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 189
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 190 DVWSFGILLTEL 201
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
+I EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 85 EPIYIVI-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 196
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 197 DVWSFGILLTEL 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 305
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 362
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 363 DVWSFGILLTEL 374
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 130
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 187
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 188 DVWSFGILLTEL 199
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 128
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 185
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 186 DVWSFGILLTEL 197
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 130
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 131 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 188 LTES--KFSVASDVWSFGVVLYELF 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 129
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 130 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 187 LTES--KFSVASDVWSFGVVLYELF 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 81 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K++DFG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 189
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 190 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 235
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 236 EGARDLISR--------LLKHNPSQRPMLREVLE 261
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 355 EKLGTGGYGNVYKGKF-PDGRLVAVKVLEKT--SNFSDNFINEVATIGRIHHVNIIHLLG 411
E++G G +G V+ G+ D LVAVK +T + F+ E + + H NI+ L+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
C ++ E + G L E L +K LL++ A +EYL + C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK--TLLQMVGDAAAGMEYLESKC---C 234
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+ +N L+ K+SDFG+++ + + + + + APE N G
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL--NYGRY 292
Query: 532 SGKSDVYSYGMLLLE 546
S +SDV+S+G+LL E
Sbjct: 293 SSESDVWSFGILLWE 307
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 388
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 445
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 446 DVWSFGILLTEL 457
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 131
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 132 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 189 LTES--KFSVASDVWSFGVVLYELF 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 131
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 132 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 189 LTES--KFSVASDVWSFGVVLYELF 211
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 196
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 197 DVWSFGILLTEL 208
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 18/206 (8%)
Query: 353 FKEKLGTGGYGNVYKG--KFPDGR--LVAVKVLEK--TSNFSDNFINEVATIGRIHHVNI 406
++ +G G +G V G K P R VA+K L+ T +F++E + +G+ H N+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
IHL G + +I E+M NGSL L + ++ +L+ + G+A ++YL
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL--- 125
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG---TIGYIAPE- 522
++ +H + +N+L++ + KVSDFGL++ + S T T G I + APE
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 523 IFMRNLGNPSGKSDVYSYGMLLLEMI 548
I R + SDV+SYG+++ E++
Sbjct: 186 IQYRKF---TSASDVWSYGIVMWEVM 208
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 407 IHLLGFCCDGSTRALI-YEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA ++YL +
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYLAS 150
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 151 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 208 LQTQ--KFTTKSDVWSFGVLLWELM 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 162
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 163 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 220 LTES--KFSVASDVWSFGVVLYELF 242
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K++DFG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 187
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 188 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 233
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 234 EGARDLISR--------LLKHNPSQRPMLREVLE 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R+ + GT+ Y+ PE+ +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC-----GTLDYLPPEMIEGRMH 186
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 187 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 232
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 233 TEGARDLISR--------LLKHNPSQRPMLREVLE 259
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 138
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 139 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 196 LTES--KFSVASDVWSFGVVLYELF 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 135
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 136 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 193 LTES--KFSVASDVWSFGVVLYELF 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 134
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 135 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 192 LTES--KFSVASDVWSFGVVLYELF 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 136
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 137 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 194 LTES--KFSVASDVWSFGVVLYELF 216
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K++DFG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 184
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 185 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 230
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 231 EGARDLISR--------LLKHNPSQRPMLREVLE 256
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 137
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 138 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 195 LTES--KFSVASDVWSFGVVLYELF 217
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 196
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 197 DVWSFGILLTEL 208
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 131
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 132 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 189 LTES--KFSVASDVWSFGVVLYELF 211
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 152/328 (46%), Gaps = 46/328 (14%)
Query: 315 EERQNIGDGLNVKQFIKTYRSALLSNYSYNDIKKMTNGFKEKL-----------GTGGYG 363
E+R + G+G ++T+ + ++Y D + + F ++L G G +G
Sbjct: 4 EKRLHFGNGHLKLPGLRTF----VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFG 59
Query: 364 NVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLLGFCCDGS 417
V G K P + ++V + +++ +F+ E + +G+ H NII L G
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 418 TRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIK 477
++ EYM NGSL L + ++ +L+ + G+A ++YL ++ +H D+
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 478 PQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNLGNPSGKS 535
+N+L++ + KVSDFGL++ + + T G + I + +PE I R + S
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSAS 231
Query: 536 DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIA 595
DV+SYG++L E++ + RP S + +A + +L P DC A
Sbjct: 232 DVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKAVDEGY---RLPPPM---------DCPA 277
Query: 596 RKMIIVGLWCIQINPKDRPSMTRVVEML 623
+ + L C Q + +RP ++V +L
Sbjct: 278 -ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 152/328 (46%), Gaps = 46/328 (14%)
Query: 315 EERQNIGDGLNVKQFIKTYRSALLSNYSYNDIKKMTNGFKEKL-----------GTGGYG 363
E+R + G+G ++TY + +++ D + + F ++L G G +G
Sbjct: 4 EKRLHFGNGHLKLPGLRTY----VDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFG 59
Query: 364 NVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLLGFCCDGS 417
V G K P + ++V + +++ +F+ E + +G+ H NII L G
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 418 TRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIK 477
++ EYM NGSL L + ++ +L+ + G+A ++YL ++ +H D+
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 478 PQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNLGNPSGKS 535
+N+L++ + KVSDFGL++ + + T G + I + +PE I R + S
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSAS 231
Query: 536 DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIA 595
DV+SYG++L E++ + RP S + +A + +L P DC A
Sbjct: 232 DVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKAVDEGY---RLPPPM---------DCPA 277
Query: 596 RKMIIVGLWCIQINPKDRPSMTRVVEML 623
+ + L C Q + +RP ++V +L
Sbjct: 278 -ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 93 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 145
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K++DFG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 201
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 202 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 247
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 248 EGARDLISR--------LLKHNPSQRPMLREVLE 273
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 355 EKLGTGGYGNVYKGKF-PDGRLVAVKVLEKT--SNFSDNFINEVATIGRIHHVNIIHLLG 411
E++G G +G V+ G+ D LVAVK +T + F+ E + + H NI+ L+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
C ++ E + G L E L +K LL++ A +EYL + C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK--TLLQMVGDAAAGMEYLESKC---C 234
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+ +N L+ K+SDFG+++ + + + + + APE N G
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL--NYGRY 292
Query: 532 SGKSDVYSYGMLLLE 546
S +SDV+S+G+LL E
Sbjct: 293 SSESDVWSFGILLWE 307
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 31/275 (11%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P + ++V + +++ +F+ E + +G+ H NII L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G ++ EYM NGSL L + ++ +L+ + G+A ++YL ++
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMG 167
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFGLA+ + + T G + I + +PE I R
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVE 588
+ SDV+SYG++L E++ + RP S + +A + +L P
Sbjct: 228 ---TSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKAVDEGY---RLPPPM------ 273
Query: 589 EEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
DC A + + L C Q + +RP ++V +L
Sbjct: 274 ---DCPA-ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 102 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 154
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K++DFG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 210
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 211 --EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 256
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 257 EGARDLISR--------LLKHNPSQRPMLREVLE 282
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K++DFG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 187
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 188 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 233
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 234 EGARDLISR--------LLKHNPSQRPMLREVLE 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 75 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 127
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K++DFG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 183
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 184 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 229
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 230 EGARDLISR--------LLKHNPSQRPMLREVLE 255
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 149
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 150 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 207 LTES--KFSVASDVWSFGVVLYELF 229
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 80 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 132
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K++DFG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 188
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 189 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 234
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 235 EGARDLISR--------LLKHNPSQRPMLREVLE 260
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 407 IHLLGFCCDGSTRALI-YEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA ++YL +
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYLAS 143
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 144 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 201 LQTQ--KFTTKSDVWSFGVLLWELM 223
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 407 IHLLGFCCDGSTRALIY-EYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA ++YL +
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYLAS 170
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 171 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 228 LQTQ--KFTTKSDVWSFGVLLWELM 250
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 407 IHLLGFCCDGSTRALIY-EYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA ++YL
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-- 167
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 227 LQTQ--KFTTKSDVWSFGVLLWELM 249
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G + +E + LS R +A+A+ Y H+ R
Sbjct: 81 YFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K++DFG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 189
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 190 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 235
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 236 EGARDLISR--------LLKHNPSQRPMLREVLE 261
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R+ + GT+ Y+ PE+ +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC-----GTLDYLPPEMIEGRMH 183
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 184 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 229
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 230 TEGARDLISR--------LLKHNPSQRPMLREVLE 256
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 407 IHLLGFCCDGSTRALI-YEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA ++YL +
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYLAS 148
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 149 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 206 LQTQ--KFTTKSDVWSFGVLLWELM 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 407 IHLLGFCCDGSTRALI-YEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA ++YL +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYLAS 151
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 209 LQTQ--KFTTKSDVWSFGVLLWELM 231
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 149
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 150 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 207 LTES--KFSVASDVWSFGVVLYELF 229
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L++++ +A + Y+ + +H D
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER---MNYVHRD 136
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQ-GAKFPIKWTAPEAAL--YGRFTIKS 193
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 194 DVWSFGILLTEL 205
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
+ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 196
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 197 DVWSFGILLTEL 208
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 407 IHLLGFCCDGSTRALI-YEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA ++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-- 149
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 209 LQTQ--KFTTKSDVWSFGVLLWELM 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 407 IHLLGFCCDGSTRALI-YEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA ++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-- 148
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 208 LQTQ--KFTTKSDVWSFGVLLWELM 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 407 IHLLGFCCDGSTRALI-YEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA ++YL
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-- 144
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 204 LQTQ--KFTTKSDVWSFGVLLWELM 226
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 34/226 (15%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL---VAVKVLEKTSNFSD--NFINEVAT 397
+NDIK F++ +G G +G V K + L A+K +++ ++ D +F E+
Sbjct: 21 WNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 398 IGRI-HHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA--------- 447
+ ++ HH NII+LLG C L EY P+G+L D L R+ L PA
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTAS 134
Query: 448 -----RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSR 502
+LL A VA ++YL + + +H ++ +N+L+ ++ K++DFGL++
Sbjct: 135 TLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQE- 190
Query: 503 NRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
V T R + ++A E N + SDV+SYG+LL E++
Sbjct: 191 --VYVKKTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 232
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L++++ +A + Y+ + +H D
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER---MNYVHRD 136
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 193
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 194 DVWSFGILLTEL 205
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 407 IHLLGFCCDGSTRALI-YEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA ++YL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-- 147
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 207 LQTQ--KFTTKSDVWSFGVLLWELM 229
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 77 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 129
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R + GT+ Y+ PE+ +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC-----GTLDYLPPEMIEGRMH 184
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 185 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 230
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 231 TEGARDLISR--------LLKHNPSQRPMLREVLE 257
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 131/275 (47%), Gaps = 31/275 (11%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P + ++V + +++ +F+ E + +G+ H NII L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G ++ EYM NGSL L + ++ +L+ + G+A ++YL ++
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMG 167
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFGL++ + + T G + I + +PE I R
Sbjct: 168 FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVE 588
+ SDV+SYG++L E++ + RP S + +A + +L P
Sbjct: 228 ---TSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKAVDEGY---RLPPPM------ 273
Query: 589 EEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
DC A + + L C Q + +RP ++V +L
Sbjct: 274 ---DCPA-ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 18/220 (8%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P + ++V + +++ +F+ E + +G+ H NII L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G ++ EYM NGSL L + ++ +L+ + G+A ++YL ++
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMG 138
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFGL++ + + T G + I + +PE I R
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEA 568
+ SDV+SYG++L E++ + RP S + +A
Sbjct: 199 ---TSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKA 233
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R+ + GT+ Y+ PE+ +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC-----GTLDYLPPEMIEGRMH 183
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 184 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 229
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 230 TEGARDLISR--------LLKHNPSQRPMLREVLE 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 78 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 130
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R + GT+ Y+ PE+ +
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC-----GTLDYLPPEMIEGRMH 185
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 186 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 231
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 232 TEGARDLISR--------LLKHNPSQRPMLREVLE 258
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 14/194 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+ +G G +G+V G + G VAVK + K + F+ E + + ++ H N++ LLG
Sbjct: 199 QTIGKGEFGDVMLGDY-RGNKVAVKCI-KNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 415 D-GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ ++ EYM GSL D L R + L LL+ +L V A+EYL +H
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 312
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSG 533
D+ +NVL+ D KVSDFGL K S + TG + + + APE S
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----TG-KLPVKWTAPEALREK--KFST 365
Query: 534 KSDVYSYGMLLLEM 547
KSDV+S+G+LL E+
Sbjct: 366 KSDVWSFGILLWEI 379
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R+ + GT+ Y+ PE+ +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC-----GTLDYLPPEMIEGRMH 183
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 184 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 229
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 230 TEGARDLISR--------LLKHNPSQRPMLREVLE 256
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 73 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 125
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K++DFG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 181
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 182 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 227
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 228 EGARDLISR--------LLKHNPSQRPMLREVLE 253
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 18/220 (8%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P + ++V + +++ +F+ E + +G+ H NII L
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G ++ EYM NGSL L + ++ +L+ + G+A ++YL ++
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMG 155
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFGL++ + + T G + I + +PE I R
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 215
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEA 568
+ SDV+SYG++L E++ + RP S + +A
Sbjct: 216 ---TSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKA 250
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 14/194 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+ +G G +G+V G + G VAVK + K + F+ E + + ++ H N++ LLG
Sbjct: 27 QTIGKGEFGDVMLGDY-RGNKVAVKCI-KNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 415 D-GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ ++ EYM GSL D L R + L LL+ +L V A+EYL +H
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 140
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSG 533
D+ +NVL+ D KVSDFGL K S + TG + + + APE S
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----TG-KLPVKWTAPEALREK--KFST 193
Query: 534 KSDVYSYGMLLLEM 547
KSDV+S+G+LL E+
Sbjct: 194 KSDVWSFGILLWEI 207
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM GSL D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 252 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 306
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGL + N G + I + APE + G + KS
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 363
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 364 DVWSFGILLTEL 375
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 14/194 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+ +G G +G+V G + G VAVK + K + F+ E + + ++ H N++ LLG
Sbjct: 12 QTIGKGEFGDVMLGDY-RGNKVAVKCI-KNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 415 D-GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ ++ EYM GSL D L R + L LL+ +L V A+EYL +H
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 125
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSG 533
D+ +NVL+ D KVSDFGL K S + TG + + + APE S
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----TG-KLPVKWTAPEALREK--KFST 178
Query: 534 KSDVYSYGMLLLEM 547
KSDV+S+G+LL E+
Sbjct: 179 KSDVWSFGILLWEI 192
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM G L D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 196
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 197 DVWSFGILLTEL 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 77 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 129
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R+ + GT+ Y+ PE+ +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC-----GTLDYLPPEMIEGRMH 184
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 185 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 230
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 231 TEGARDLISR--------LLKHNPSQRPMLREVLE 257
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 131/275 (47%), Gaps = 31/275 (11%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P + ++V + +++ +F+ E + +G+ H NII L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G ++ EYM NGSL L + ++ +L+ + G+A ++YL ++
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMG 167
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFGL++ + + T G + I + +PE I R
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVE 588
+ SDV+SYG++L E++ + RP S + +A + +L P
Sbjct: 228 ---TSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKAVDEGY---RLPPPM------ 273
Query: 589 EEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
DC A + + L C Q + +RP ++V +L
Sbjct: 274 ---DCPA-ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 8/192 (4%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
KLG G +G V+ G + VA+K L+ + + F+ E + ++ H ++ L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
++ EYM G L D L E L+ +L+++A +A + Y+ + +H D
Sbjct: 85 EPI-YIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 476 IKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS 535
++ N+L+ + KV+DFGLA+ N G + I + APE + G + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL--YGRFTIKS 196
Query: 536 DVYSYGMLLLEM 547
DV+S+G+LL E+
Sbjct: 197 DVWSFGILLTEL 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 81 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R+ + GT+ Y+ PE+ +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC-----GTLDYLPPEMIEGRMH 188
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 189 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 234
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 235 TEGARDLISR--------LLKHNPSQRPMLREVLE 261
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 18/206 (8%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGR--LVAVKVLEK--TSNFSDNFINEVATIGRIHHVNI 406
+E +G G +G V +G+ P + VA+K L+ T F++E + +G+ H NI
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L G + ++ E+M NG+L L ++ +L+ + G+A + YL
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYL--- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT---GPRGTIGYIAPE- 522
E+ +H D+ +N+L++ + KVSDFGL++ N S T T G + I + APE
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 523 IFMRNLGNPSGKSDVYSYGMLLLEMI 548
I R + SD +SYG+++ E++
Sbjct: 193 IAFRKF---TSASDAWSYGIVMWEVM 215
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R+ + GT+ Y+ PE+ +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC-----GTLDYLPPEMIEGRMH 183
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 184 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 229
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 230 TEGARDLISR--------LLKHNPSQRPMLREVLE 256
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 78 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 130
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K+++FG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 186
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 187 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 232
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 233 EGARDLISR--------LLKHNPSQRPMLREVLE 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 120/275 (43%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G + +E + LS R +A+A+ Y H+ R
Sbjct: 81 YFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R + GT+ Y+ PE+ +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX-----GTLDYLPPEMIEGRMH 188
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 189 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 234
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 235 TEGARDLISR--------LLKHNPSQRPMLREVLE 261
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R+ + GT+ Y+ PE+ +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC-----GTLDYLPPEMIEGRMH 183
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 184 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 229
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 230 TEGARDLISR--------LLKHNPSQRPMLREVLE 256
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 8/204 (3%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
+I + + ++KLG G +G V+ + VAVK ++ S + F+ E + + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I E+M GSL D L ++ + P +L++ + +A + ++
Sbjct: 244 KLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLP-KLIDFSAQIAEGMAFIE 301
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ +H D++ N+L+ K++DFGLA+ N G + I + APE
Sbjct: 302 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAI 357
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMI 548
N G+ + KSDV+S+G+LL+E++
Sbjct: 358 --NFGSFTIKSDVWSFGILLMEIV 379
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L + KE + +LL+ + +EYL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLG 132
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H ++ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 133 TK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 190 LTES--KFSVASDVWSFGVVLYELF 212
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R + GT+ Y+ PE+ +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC-----GTLDYLPPEMIEGRMH 183
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 184 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 229
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 230 TEGARDLISR--------LLKHNPSQRPMLREVLE 256
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 31/275 (11%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P + ++V + +++ +F+ E + +G+ H NII L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G ++ EYM NGSL L + ++ +L+ + G+A ++YL ++
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMG 167
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFGL + + + T G + I + +PE I R
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVE 588
+ SDV+SYG++L E++ + RP S + +A + +L P
Sbjct: 228 ---TSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKAVDEGY---RLPPPM------ 273
Query: 589 EEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
DC A + + L C Q + +RP ++V +L
Sbjct: 274 ---DCPA-ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R + GT+ Y+ PE+ +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC-----GTLDYLPPEMIEGRMH 186
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 187 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 232
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 233 TEGARDLISR--------LLKHNPSQRPMLREVLE 259
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 8/204 (3%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
+I + + ++KLG G +G V+ + VAVK ++ S + F+ E + + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I E+M GSL D L ++ + P +L++ + +A + ++
Sbjct: 71 KLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLP-KLIDFSAQIAEGMAFIE 128
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ +H D++ N+L+ K++DFGLA+ N G + I + APE
Sbjct: 129 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAI 184
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMI 548
N G+ + KSDV+S+G+LL+E++
Sbjct: 185 --NFGSFTIKSDVWSFGILLMEIV 206
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 151/328 (46%), Gaps = 46/328 (14%)
Query: 315 EERQNIGDGLNVKQFIKTYRSALLSNYSYNDIKKMTNGFKEKL-----------GTGGYG 363
E+R + G+G ++TY + ++Y D + + F ++L G G +G
Sbjct: 4 EKRLHFGNGHLKLPGLRTY----VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFG 59
Query: 364 NVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLLGFCCDGS 417
V G K P + ++V + +++ +F+ E + +G+ H NII L G
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 418 TRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIK 477
++ E M NGSL L + ++ +L+ + G+A ++YL ++ +H D+
Sbjct: 120 PVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 478 PQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNLGNPSGKS 535
+N+L++ + KVSDFGL++ + + T G + I + +PE I R + S
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSAS 231
Query: 536 DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIA 595
DV+SYG++L E++ + RP S + +A + +L P DC A
Sbjct: 232 DVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKAVDEGY---RLPPPM---------DCPA 277
Query: 596 RKMIIVGLWCIQINPKDRPSMTRVVEML 623
+ + L C Q + +RP ++V +L
Sbjct: 278 -ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 120/274 (43%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 81 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K++DFG + H+ + T+ GT+ Y+ PE +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEXIEGRXHD 189
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 190 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 235
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 236 EGARDLISR--------LLKHNPSQRPXLREVLE 261
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 14/194 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+ +G G +G+V G + G VAVK + K + F+ E + + ++ H N++ LLG
Sbjct: 18 QTIGKGEFGDVMLGDY-RGNKVAVKCI-KNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 415 D-GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ ++ EYM GSL D L R + L LL+ +L V A+EYL +H
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 131
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSG 533
D+ +NVL+ D KVSDFGL K S + TG + + + APE S
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----TG-KLPVKWTAPEALRE--AAFST 184
Query: 534 KSDVYSYGMLLLEM 547
KSDV+S+G+LL E+
Sbjct: 185 KSDVWSFGILLWEI 198
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 125/278 (44%), Gaps = 50/278 (17%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + + A+KVL K + EV + H NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ +
Sbjct: 76 YFHDSTRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---K 128
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R+ + GT+ Y+ PE+ +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC-----GTLDYLPPEMIEGRMH 183
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT------TEAYFPDWIYDKLIQPEK 583
+ K D++S G+L E + K P E + +T E FPD++
Sbjct: 184 DE--KVDLWSLGVLCYEFLVGKP---PFEANTYQDTYKRISRVEFTFPDFV--------- 229
Query: 584 EDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 230 ---TEGARDLISR--------LLKHNPSQRPMLREVLE 256
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 407 IHLLGFCCDGSTRALIY-EYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA +++L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-- 147
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNR--SVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 207 LQTQ--KFTTKSDVWSFGVLLWELM 229
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL K+++FG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 187
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDFV 587
K D++S G+L E + K ET + E FPD++
Sbjct: 188 E--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------T 233
Query: 588 EEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 234 EGARDLISR--------LLKHNPSQRPMLREVLE 259
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 407 IHLLGFCCDGSTRALIY-EYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA +++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-- 150
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNR--SVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 210 LQTQ--KFTTKSDVWSFGVLLWELM 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 407 IHLLGFCCDGSTRALIY-EYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA +++L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-- 208
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNR--SVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 268 LQTQ--KFTTKSDVWSFGVLLWELM 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 407 IHLLGFCCDGSTRALIY-EYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA +++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-- 149
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNR--SVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 209 LQTQ--KFTTKSDVWSFGVLLWELM 231
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 407 IHLLGFCCDGSTRALIY-EYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA +++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-- 149
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNR--SVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 209 LQTQ--KFTTKSDVWSFGVLLWELM 231
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 407 IHLLGFCCDGSTRALIY-EYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA +++L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-- 154
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNR--SVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 214 LQTQ--KFTTKSDVWSFGVLLWELM 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGRLV--AVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
F E +G G +G VY G DG+ + AVK L + ++ + F+ E + H N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 407 IHLLGFCCDGSTRALI-YEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
+ LLG C L+ YM +G L + + E N ++K L+ L VA +++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-- 150
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N +LD FT KV+DFGLA+ SV TG + + ++A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ KSDV+S+G+LL E++
Sbjct: 210 LQTQ--KFTTKSDVWSFGVLLWELM 232
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 18/206 (8%)
Query: 353 FKEKLGTGGYGNVYKGKF--PDGR--LVAVKVLEK--TSNFSDNFINEVATIGRIHHVNI 406
+E +G G +G V +G+ P + VA+K L+ T F++E + +G+ H NI
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L G + ++ E+M NG+L L ++ +L+ + G+A + YL
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYL--- 134
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT---GPRGTIGYIAPE- 522
E+ +H D+ +N+L++ + KVSDFGL++ N S T T G + I + APE
Sbjct: 135 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 523 IFMRNLGNPSGKSDVYSYGMLLLEMI 548
I R + SD +SYG+++ E++
Sbjct: 195 IAFRKF---TSASDAWSYGIVMWEVM 217
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R + GT+ Y+ PE+ +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-----GTLDYLPPEMIEGRMH 186
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 187 DE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 232
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 233 TEGARDLISR--------LLKHNPSQRPMLREVLE 259
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 44/275 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K + EV + H NI+ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 102 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 154
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL K++DFG + A S R + GT+ Y+ PE+ +
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-----GTLDYLPPEMIEGRMH 209
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRPT---ETTSGSNTTEAYFPDWIYDKLIQPEKEDF 586
+ K D++S G+L E + K ET + E FPD++
Sbjct: 210 D--EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------------ 255
Query: 587 VEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E D I+R ++ NP RP + V+E
Sbjct: 256 TEGARDLISR--------LLKHNPSQRPMLREVLE 282
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 17/202 (8%)
Query: 357 LGTGGYGNVYKGKF-PDG----RLVAVKVL--EKTSNFSDNFINEVATIGRIHHVNIIHL 409
LG G +G V ++ P+G VAVK L E N + E+ + ++H NI+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 410 LGFCCD--GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
G C + G+ LI E++P+GSL + L + K ++LK + L+ A+ + ++YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLK--QQLKYAVQICKGMDYLGS-- 144
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT-IGYIAPEIFMR 526
+ +H D+ +NVL++ + K+ DFGL KA ++ T+ R + + + APE M+
Sbjct: 145 -RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + SDV+S+G+ L E++
Sbjct: 204 SKFYIA--SDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 17/202 (8%)
Query: 357 LGTGGYGNVYKGKF-PDG----RLVAVKVL--EKTSNFSDNFINEVATIGRIHHVNIIHL 409
LG G +G V ++ P+G VAVK L E N + E+ + ++H NI+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 410 LGFCCD--GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
G C + G+ LI E++P+GSL + L + K ++LK + L+ A+ + ++YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLK--QQLKYAVQICKGMDYLGS-- 132
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT-IGYIAPEIFMR 526
+ +H D+ +NVL++ + K+ DFGL KA ++ T+ R + + + APE M+
Sbjct: 133 -RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + SDV+S+G+ L E++
Sbjct: 192 SKFYIA--SDVWSFGVTLHELL 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F ++LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI EY+P GSL D L E + +LL+ + +EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERID--HIKLLQYTSQICKGMEYLG 134
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 135 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 192 LTES--KFSVASDVWSFGVVLYELF 214
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 353 FKEKLGTGGYGNVYKGKFP-----DGRLVAVKVLEK-TSNFSDNFINEVATIGRIHHVNI 406
F +LG G +G+V ++ G +VAVK L+ T +F E+ + + H NI
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 407 IHLLGFCCDGSTR--ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
+ G C R LI E++P GSL + L + KE + +LL+ + +EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERID--HIKLLQYTSQICKGMEYLG 134
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEI 523
R +H D+ +N+L++ + K+ DFGL K +++ + P I + APE
Sbjct: 135 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ S SDV+S+G++L E+
Sbjct: 192 LTES--KFSVASDVWSFGVVLYELF 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 334 RSALLSNYSYNDIKKMTNGFKEK-LGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNF 387
RS N + I K T K K LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 6 RSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 65
Query: 388 SDN--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLK 445
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 446 PARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRS 505
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 125 --YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 506 VVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 6 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ-- 117
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 175 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 213
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 7 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQ-- 118
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 119 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 176 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 20/220 (9%)
Query: 336 ALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSDN 390
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++ N
Sbjct: 4 ALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 58
Query: 391 --FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR 448
++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 59 KEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ--Y 115
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVT 508
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 116 LLNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 172
Query: 509 MTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 173 AEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 210
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 102/200 (51%), Gaps = 16/200 (8%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P + ++V + +++ +F+ E + +G+ H NII L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G ++ E M NGSL L + ++ +L+ + G+A ++YL ++
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMG 138
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFGL++ + + T G + I + +PE I R
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ SDV+SYG++L E++
Sbjct: 199 ---TSASDVWSYGIVLWEVM 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 7 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ-- 118
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 119 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 176 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 8 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ-- 119
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 120 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 177 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 6 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 117
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 175 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 213
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 10 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 64
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 65 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ-- 121
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 122 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 178
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 179 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 217
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 9 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ-- 120
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 121 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 178 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 6 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 117
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 175 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 213
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHV 404
+I + + ++KLG G +G V+ + VAVK ++ S + F+ E + + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
++ L +I E+M GSL D L ++ + P +L++ + +A + ++
Sbjct: 238 KLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLP-KLIDFSAQIAEGMAFIE 295
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ +H D++ N+L+ K++DFGLA+ G + I + APE
Sbjct: 296 ---QRNYIHRDLRAANILVSASLVCKIADFGLAR-----------VGAKFPIKWTAPEAI 341
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMI 548
N G+ + KSDV+S+G+LL+E++
Sbjct: 342 --NFGSFTIKSDVWSFGILLMEIV 363
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 16 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 70
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 71 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 127
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 128 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 184
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 185 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 20/220 (9%)
Query: 336 ALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSDN 390
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++ N
Sbjct: 1 ALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 55
Query: 391 --FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR 448
++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 56 KEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ--Y 112
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVT 508
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 113 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 169
Query: 509 MTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 170 AEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 207
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 12 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 66
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 67 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 123
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 124 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 180
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 181 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 219
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 8 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 119
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 120 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 177 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 6 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQ-- 117
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 175 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 213
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 9 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 120
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 121 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 178 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 31 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 85
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 86 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 142
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 143 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 199
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 200 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 238
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 31/275 (11%)
Query: 357 LGTGGYGNVYKG--KFPDGRLVAVKVLEKTSNFSD----NFINEVATIGRIHHVNIIHLL 410
+G G +G V G K P + ++V + +++ +F+ E + +G+ H NII L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G ++ E M NGSL L + ++ +L+ + G+A ++YL ++
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMG 167
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN-RSVVTMTGPRGTIGYIAPE-IFMRNL 528
+H D+ +N+L++ + KVSDFGL++ + + T G + I + +PE I R
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVE 588
+ SDV+SYG++L E++ + RP S + +A + +L P
Sbjct: 228 ---TSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVIKAVDEGY---RLPPPM------ 273
Query: 589 EEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
DC A + + L C Q + +RP ++V +L
Sbjct: 274 ---DCPA-ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 9 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 120
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 121 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 178 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 9 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 120
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 121 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 178 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 24/228 (10%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL KT + EV + H NI+ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 80 YFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALSYCHSK---R 132
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H DIKP+N+LL + K++DFG + H+ + T+ GT+ Y+ PE+ + +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLC---GTLDYLPPEMIEGRMHD 188
Query: 531 PSGKSDVYSYGML----LLEMIEEKKHLRPTETTSGSNTTEAYFPDWI 574
K D++S G+L L+ M + H ET + E FPD++
Sbjct: 189 E--KVDLWSLGVLCYEFLVGMPPFEAHTY-QETYRRISRVEFTFPDFV 233
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLVAVKVL-----EKTS-NF 387
ALL + KK+ + LG+G +G VYKG + P+G V + V E TS
Sbjct: 40 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKA 94
Query: 388 SDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
+ ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 95 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 151
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 152 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 208
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 209 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 247
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 57/297 (19%)
Query: 353 FKEKLGTGGYGNVYKGKF-PDGRLVAVKVL---------EKTSNFSDNFINEVATIGRIH 402
+++++G GG+G V+KG+ D +VA+K L E F + F EV + ++
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE-FQREVFIMSNLN 81
Query: 403 HVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENL--SLKPARLLEIALGVAHAI 460
H NI+ L G + ++ E++P G L L + + S+K +L+IALG I
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG----I 135
Query: 461 EYLHNGCELRILHLDIKPQNVLL-----DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
EY+ N I+H D++ N+ L + KV+DFGL++ +SV +++G G
Sbjct: 136 EYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGN 189
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIY 575
++APE + + K+D YS+ M+L ++ T E F ++ Y
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTIL----------------TGEGPFDEYSY 233
Query: 576 DKLIQPEKEDFVEEE-------DDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
K+ + + + EE +DC R ++ L C +PK RP + +V+ LS
Sbjct: 234 GKI---KFINMIREEGLRPTIPEDCPPRLRNVIEL-CWSGDPKKRPHFSYIVKELSE 286
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 36/288 (12%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLL-SREKENLSLKPARLLEIALGVAHAIEY--- 462
+LLG C G +I E+ G+L L S+ E + KP L + L + H I Y
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 463 LHNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
+ G E + +H D+ +N+LL K+ DFGLA+ ++ V R + +
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 519 IAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+APE IF R + +SDV+S+G+LL E+ S Y I ++
Sbjct: 217 MAPETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKIDEE 259
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
+ KE D +M L C P RP+ + +VE L +
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL KT + EV + H NI+ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNGCELR 470
+ D + LI EY P G++ RE + LS R +A+A+ Y H+ R
Sbjct: 80 YFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALSYCHSK---R 132
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H DIKP+N+LL + K++DFG + A S R + GT+ Y+ PE+ +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC-----GTLDYLPPEMIEGRMH 187
Query: 530 NPSGKSDVYSYGML----LLEMIEEKKHLRPTETTSGSNTTEAYFPDWI 574
+ K D++S G+L L+ M + H ET + E FPD++
Sbjct: 188 DE--KVDLWSLGVLCYEFLVGMPPFEAHTY-QETYRRISRVEFTFPDFV 233
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 16/216 (7%)
Query: 337 LLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKG-KFPDGRLVAVKVLE-KTSNFSDNFINE 394
L S S D KK F EK+G G G VY G+ VA++ + + + INE
Sbjct: 9 LRSIVSVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67
Query: 395 VATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIAL 454
+ + + NI++ L G ++ EY+ GSL D+++ + ++ +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCR 123
Query: 455 GVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGL-AKAHSRNRSVVTMTGPR 513
A+E+LH+ +++H DIK N+LL D + K++DFG A+ TM
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV--- 177
Query: 514 GTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
GT ++APE+ R P K D++S G++ +EMIE
Sbjct: 178 GTPYWMAPEVVTRKAYGP--KVDIWSLGIMAIEMIE 211
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 16/223 (7%)
Query: 334 RSALLSNYSYNDIKKMTNGFKEK-LGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNF 387
RS N + I K T K K L +G +G VYKG + P+G V A+K L + ++
Sbjct: 6 RSGEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 65
Query: 388 SDN--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLK 445
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ 124
Query: 446 PARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRS 505
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 125 --YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 506 VVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 220
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 357 LGTGGYGNVYKGKF-PDGRL----VAVKVLEKTSNFS--DNFINEVATIGRIHHVNIIHL 409
LG+G +G V+KG + P+G V +KV+E S + + IG + H +I+ L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
LG C GS+ L+ +Y+P GSL D + + + +L P LL + +A + YL E
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRG--ALGPQLLLNWGVQIAKGMYYLE---EH 152
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H ++ +NVLL +V+DFG+A + + + + I ++A E + G
Sbjct: 153 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI--HFG 210
Query: 530 NPSGKSDVYSYGMLLLEMI 548
+ +SDV+SYG+ + E++
Sbjct: 211 KYTHQSDVWSYGVTVWELM 229
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 16/223 (7%)
Query: 334 RSALLSNYSYNDIKKMTNGFKEK-LGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNF 387
RS N + I K T K K L +G +G VYKG + P+G V A+K L + ++
Sbjct: 6 RSGEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 65
Query: 388 SDN--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLK 445
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 446 PARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRS 505
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 125 --YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 506 VVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 220
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 16/223 (7%)
Query: 334 RSALLSNYSYNDIKKMTNGFKEK-LGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNF 387
RS N + I K T K K LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 6 RSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 65
Query: 388 SDN--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLK 445
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 446 PARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRS 505
LL + +A + YL + R++H D+ +NVL+ K++DFG AK
Sbjct: 125 --YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 179
Query: 506 VVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 220
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 8 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ-- 119
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFG AK
Sbjct: 120 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 177 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 10 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 64
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 65 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ-- 121
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFG AK
Sbjct: 122 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 178
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 179 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 217
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 355 EKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFINEVATIGRI-HHVNIIHLLGF 412
E +G G YG VYKG+ G+L A+KV++ T + + E+ + + HH NI G
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 413 CCDGSTRA------LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
+ L+ E+ GS+ DL+ K N +LK + I + + +LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN-TLKEEWIAYICREILRGLSHLH-- 146
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
+ +++H DIK QNVLL + K+ DFG++ +R+V GT ++APE+
Sbjct: 147 -QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA--QLDRTVGRRNTFIGTPYWMAPEVIAC 203
Query: 527 NLGNPSG----KSDVYSYGMLLLEMIE 549
+ NP KSD++S G+ +EM E
Sbjct: 204 D-ENPDATYDFKSDLWSLGITAIEMAE 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
Query: 346 IKKMTNGFKEK-------LGTGGYGNVYKGKF-PDGRL----VAVKVLEKTSNFS--DNF 391
+K + FKE LG+G +G V+KG + P+G V +KV+E S
Sbjct: 3 MKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV 62
Query: 392 INEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLE 451
+ + IG + H +I+ LLG C GS+ L+ +Y+P GSL D + + + +L P LL
Sbjct: 63 TDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRG--ALGPQLLLN 119
Query: 452 IALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTG 511
+ +A + YL E ++H ++ +NVLL +V+DFG+A + + +
Sbjct: 120 WGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 176
Query: 512 PRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
+ I ++A E + G + +SDV+SYG+ + E++
Sbjct: 177 AKTPIKWMALESI--HFGKYTHQSDVWSYGVTVWELM 211
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 8 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ-- 119
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFG AK
Sbjct: 120 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 177 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 215
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 32/218 (14%)
Query: 357 LGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
LG G +G V K + D R A+K + T ++EV + ++H ++ +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 416 -------------GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
ST + EY NG+L DL+ ENL+ + + + A+ Y
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI--HSENLNQQRDEYWRLFRQILEALSY 131
Query: 463 LHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV------------TMT 510
+H+ I+H D+KP N+ +D K+ DFGLAK R+ ++ +T
Sbjct: 132 IHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
GT Y+A E+ + G+ + K D+YS G++ EMI
Sbjct: 189 SAIGTAMYVATEV-LDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 112/221 (50%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGR----LVAVKVLEKTSNFSD 389
ALL +++K+ + LG+G +G VYKG + PDG VA+KVL + ++
Sbjct: 8 QALLRILKETELRKV-----KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA 62
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + LLG C ST L+ + MP G L D + + L +
Sbjct: 63 NKEILDEAYVMAGVGSPYVSRLLGICLT-STVQLVTQLMPYGCLLDHVRENRGRLGSQ-- 119
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + +R++H D+ +NVL+ K++DFGLA+ + +
Sbjct: 120 DLLNWCMQIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEY 176
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E +R + +SDV+SYG+ + E++
Sbjct: 177 HADGGKVPIKWMALESILRR--RFTHQSDVWSYGVTVWELM 215
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 39/297 (13%)
Query: 353 FKEKLGTGGYGNVYK------GKFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HH 403
F + LG G +G V + GK VAVK+L+ T++ + ++E+ + + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 404 VNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA-----------RLLEI 452
NI++LLG C G +I EY G L + L R+ L PA LL
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 453 ALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP 512
+ VA + +L + +H D+ +NVLL K+ DFGLA+ + + +
Sbjct: 170 SSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 513 RGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPD 572
R + ++APE + + +SDV+SYG+LL E+ + G N +
Sbjct: 227 RLPVKWMAPESIFDCV--YTVQSDVWSYGILLWEIF-----------SLGLNPYPGILVN 273
Query: 573 WIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
+ KL+ K+ + + + + + C + P RP+ ++ L + E
Sbjct: 274 SKFYKLV---KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 6 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 117
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFG AK
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 174
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 175 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 213
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 37/296 (12%)
Query: 353 FKEKLGTGGYGNVYK------GKFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HH 403
F + LG G +G V + GK VAVK+L+ T++ + ++E+ + + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 404 VNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
NI++LLG C G +I EY G L + L R+ L PA IA A + L
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPA--FAIANSTASTRDLL 167
Query: 464 HNGCEL----------RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR 513
H ++ +H D+ +NVLL K+ DFGLA+ + + + R
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 514 GTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDW 573
+ ++APE + + +SDV+SYG+LL E+ + G N +
Sbjct: 228 LPVKWMAPESIFDCV--YTVQSDVWSYGILLWEIF-----------SLGLNPYPGILVNS 274
Query: 574 IYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
+ KL+ K+ + + + + + C + P RP+ ++ L + E
Sbjct: 275 KFYKLV---KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + LG+G +G VYKG + P+G V A+K L + ++
Sbjct: 8 QALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 119
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFG AK
Sbjct: 120 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 177 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 215
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I +++H NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E FM + + K+D +S+G+LL E+
Sbjct: 216 EAFMEGIF--TSKTDTWSFGVLLWEIF 240
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 335 SALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLV----AVKVLEKTSNFSD 389
ALL + KK+ + L +G +G VYKG + P+G V A+K L + ++
Sbjct: 6 QALLRILKETEFKKI-----KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 390 N--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPA 447
N ++E + + + ++ LLG C ST LI + MP G L D + K+N+ +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ-- 117
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
LL + +A + YL + R++H D+ +NVL+ K++DFGLAK
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G + I ++A E + + + +SDV+SYG+ + E++
Sbjct: 175 HAEGGKVPIKWMALESILHRIY--THQSDVWSYGVTVWELM 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 337 LLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKG-KFPDGRLVAVKVLE-KTSNFSDNFINE 394
L S S D KK F EK+G G G VY G+ VA++ + + + INE
Sbjct: 9 LRSIVSVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67
Query: 395 VATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIAL 454
+ + + NI++ L G ++ EY+ GSL D+++ + ++ +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCR 123
Query: 455 GVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFG----LAKAHSRNRSVVTMT 510
A+E+LH+ +++H DIK N+LL D + K++DFG + S+ +V
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV--- 177
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
GT ++APE+ R P K D++S G++ +EMIE
Sbjct: 178 ---GTPYWMAPEVVTRKAYGP--KVDIWSLGIMAIEMIE 211
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I +++H NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E FM + + K+D +S+G+LL E+
Sbjct: 230 EAFMEGIF--TSKTDTWSFGVLLWEIF 254
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 337 LLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKG-KFPDGRLVAVKVLE-KTSNFSDNFINE 394
L S S D KK F EK+G G G VY G+ VA++ + + + INE
Sbjct: 9 LRSIVSVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67
Query: 395 VATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIAL 454
+ + + NI++ L G ++ EY+ GSL D+++ + ++ +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCR 123
Query: 455 GVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG 514
A+E+LH+ +++H DIK N+LL D + K++DFG + +S + G
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSXMVG 178
Query: 515 TIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
T ++APE+ R P K D++S G++ +EMIE
Sbjct: 179 TPYWMAPEVVTRKAYGP--KVDIWSLGIMAIEMIE 211
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 116/291 (39%), Gaps = 53/291 (18%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 150 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTE---------TTSGSNTTEAYFPD 572
E FM + + K+D +S+G+LL E+ P++ T+ G P
Sbjct: 207 EAFMEGIF--TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG 264
Query: 573 WIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
+Y + Q C Q P+DRP+ ++E +
Sbjct: 265 PVYRIMTQ------------------------CWQHQPEDRPNFAIILERI 291
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 158 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E FM + + K+D +S+G+LL E+
Sbjct: 215 EAFMEGIF--TSKTDTWSFGVLLWEIF 239
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 116/291 (39%), Gaps = 53/291 (18%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 158 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTE---------TTSGSNTTEAYFPD 572
E FM + + K+D +S+G+LL E+ P++ T+ G P
Sbjct: 215 EAFMEGIF--TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG 272
Query: 573 WIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
+Y + Q C Q P+DRP+ ++E +
Sbjct: 273 PVYRIMTQ------------------------CWQHQPEDRPNFAIILERI 299
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 337 LLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKG-KFPDGRLVAVKVLE-KTSNFSDNFINE 394
L S S D KK F EK+G G G VY G+ VA++ + + + INE
Sbjct: 10 LRSIVSVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 68
Query: 395 VATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIAL 454
+ + + NI++ L G ++ EY+ GSL D+++ + ++ +
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCR 124
Query: 455 GVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG 514
A+E+LH+ +++H DIK N+LL D + K++DFG + +S + G
Sbjct: 125 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSXMVG 179
Query: 515 TIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
T ++APE+ R P K D++S G++ +EMIE
Sbjct: 180 TPYWMAPEVVTRKAYGP--KVDIWSLGIMAIEMIE 212
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 175 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E FM + + K+D +S+G+LL E+
Sbjct: 232 EAFMEGIF--TSKTDTWSFGVLLWEIF 256
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E FM + + K+D +S+G+LL E+
Sbjct: 216 EAFMEGIF--TSKTDTWSFGVLLWEIF 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 116/291 (39%), Gaps = 53/291 (18%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTE---------TTSGSNTTEAYFPD 572
E FM + + K+D +S+G+LL E+ P++ T+ G P
Sbjct: 230 EAFMEGIF--TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG 287
Query: 573 WIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
+Y + Q C Q P+DRP+ ++E +
Sbjct: 288 PVYRIMTQ------------------------CWQHQPEDRPNFAIILERI 314
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 185 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E FM + + K+D +S+G+LL E+
Sbjct: 242 EAFMEGIF--TSKTDTWSFGVLLWEIF 266
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 140/297 (47%), Gaps = 57/297 (19%)
Query: 353 FKEKLGTGGYGNVYKGKF-PDGRLVAVKVL---------EKTSNFSDNFINEVATIGRIH 402
+++++G GG+G V+KG+ D +VA+K L E F + F EV + ++
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE-FQREVFIMSNLN 81
Query: 403 HVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENL--SLKPARLLEIALGVAHAI 460
H NI+ L G + ++ E++P G L L + + S+K +L+IALG I
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG----I 135
Query: 461 EYLHNGCELRILHLDIKPQNVLL-----DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
EY+ N I+H D++ N+ L + KV+DFG ++ +SV +++G G
Sbjct: 136 EYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGN 189
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIY 575
++APE + + K+D YS+ M+L ++ T E F ++ Y
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTIL----------------TGEGPFDEYSY 233
Query: 576 DKLIQPEKEDFVEEE-------DDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
K+ + + + EE +DC R ++ L C +PK RP + +V+ LS
Sbjct: 234 GKI---KFINMIREEGLRPTIPEDCPPRLRNVIEL-CWSGDPKKRPHFSYIVKELSE 286
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 140/297 (47%), Gaps = 57/297 (19%)
Query: 353 FKEKLGTGGYGNVYKGKF-PDGRLVAVKVL---------EKTSNFSDNFINEVATIGRIH 402
+++++G GG+G V+KG+ D +VA+K L E F + F EV + ++
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE-FQREVFIMSNLN 81
Query: 403 HVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENL--SLKPARLLEIALGVAHAI 460
H NI+ L G + ++ E++P G L L + + S+K +L+IALG I
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG----I 135
Query: 461 EYLHNGCELRILHLDIKPQNVLL-----DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
EY+ N I+H D++ N+ L + KV+DF L++ +SV +++G G
Sbjct: 136 EYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGN 189
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIY 575
++APE + + K+D YS+ M+L ++ T E F ++ Y
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTIL----------------TGEGPFDEYSY 233
Query: 576 DKLIQPEKEDFVEEE-------DDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
K+ + + + EE +DC R ++ L C +PK RP + +V+ LS
Sbjct: 234 GKI---KFINMIREEGLRPTIPEDCPPRLRNVIEL-CWSGDPKKRPHFSYIVKELSE 286
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E FM + + K+D +S+G+LL E+
Sbjct: 216 EAFMEGIF--TSKTDTWSFGVLLWEIF 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 165 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E FM + + K+D +S+G+LL E+
Sbjct: 222 EAFMEGIF--TSKTDTWSFGVLLWEIF 246
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 176 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E FM + + K+D +S+G+LL E+
Sbjct: 233 EAFMEGIF--TSKTDTWSFGVLLWEIF 257
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 199 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E FM + + K+D +S+G+LL E+
Sbjct: 256 EAFMEGIF--TSKTDTWSFGVLLWEIF 280
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 35/293 (11%)
Query: 353 FKEKLGTGGYGNVYK------GKFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HH 403
F + LG G +G V + GK VAVK+L+ T++ + ++E+ + + H
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 404 VNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKE-NLSLKPAR------LLEIALGV 456
NI++LLG C G +I EY G L + L R+ E +L + R LL + V
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTI 516
A + +L + +H D+ +NVLL K+ DFGLA+ + + + R +
Sbjct: 162 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 517 GYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYD 576
++APE + + +SDV+SYG+LL E+ + G N + +
Sbjct: 219 KWMAPESIFDCV--YTVQSDVWSYGILLWEIF-----------SLGLNPYPGILVNSKFY 265
Query: 577 KLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
KL+ K+ + + + + + C + P RP+ ++ L + E
Sbjct: 266 KLV---KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 315
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 116/291 (39%), Gaps = 53/291 (18%)
Query: 357 LGTGGYGNVYKGKF------PDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G VY+G+ P VAVK L + + D +F+ E I + +H NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLL----SREKENLSLKPARLLEIALGVAHAIEYLH 464
+G R ++ E M G L L R + SL LL +A +A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 465 NGCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
E +H DI +N LL P K+ DFG+A+ R + ++ P
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTE---------TTSGSNTTEAYFPD 572
E FM + + K+D +S+G+LL E+ P++ T+ G P
Sbjct: 230 EAFMEGIF--TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG 287
Query: 573 WIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
+Y + Q C Q P+DRP+ ++E +
Sbjct: 288 PVYRIMTQ------------------------CWQHQPEDRPNFAIILERI 314
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 155/347 (44%), Gaps = 44/347 (12%)
Query: 308 FFKKPFSEERQNIGDGLNVKQFIKTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYK 367
+ +KP E + + + +N ++ + L ++ + + + F + LG G +G V +
Sbjct: 6 YLQKPMYEVQWKVVEEINGNNYVYIDPTQLPYDHKW-EFPRNRLSFGKTLGAGAFGKVVE 64
Query: 368 G------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNIIHLLGFCCDGST 418
K VAVK+L+ +++ ++ ++E+ + + +H+NI++LLG C G
Sbjct: 65 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 124
Query: 419 RALIYEYMPNGSLGDLLSREKENL---SLKPARL------------LEIALGVAHAIEYL 463
+I EY G L + L R++++ PA + L + VA + +L
Sbjct: 125 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 184
Query: 464 HNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N+LL K+ DFGLA+ + + V R + ++APE
Sbjct: 185 ASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPES 241
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEK 583
+ + +SDV+SYG+ L E+ + GS+ D + K+I K
Sbjct: 242 IFNCVY--TFESDVWSYGIFLWELF-----------SLGSSPYPGMPVDSKFYKMI---K 285
Query: 584 EDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
E F + +M + C +P RP+ ++V+++ +E+
Sbjct: 286 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 332
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 35/293 (11%)
Query: 353 FKEKLGTGGYGNVYK------GKFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HH 403
F + LG G +G V + GK VAVK+L+ T++ + ++E+ + + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 404 VNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKE-NLSLKPAR------LLEIALGV 456
NI++LLG C G +I EY G L + L R+ E +L + R LL + V
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTI 516
A + +L + +H D+ +NVLL K+ DFGLA+ + + + R +
Sbjct: 170 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 517 GYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYD 576
++APE + + +SDV+SYG+LL E+ + G N + +
Sbjct: 227 KWMAPESIFDCV--YTVQSDVWSYGILLWEIF-----------SLGLNPYPGILVNSKFY 273
Query: 577 KLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
KL+ K+ + + + + + C + P RP+ ++ L + E
Sbjct: 274 KLV---KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 323
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 155/347 (44%), Gaps = 44/347 (12%)
Query: 308 FFKKPFSEERQNIGDGLNVKQFIKTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYK 367
+ +KP E + + + +N ++ + L ++ + + + F + LG G +G V +
Sbjct: 6 YLQKPMYEVQWKVVEEINGNNYVYIDPTQLPYDHKW-EFPRNRLSFGKTLGAGAFGKVVE 64
Query: 368 G------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNIIHLLGFCCDGST 418
K VAVK+L+ +++ ++ ++E+ + + +H+NI++LLG C G
Sbjct: 65 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 124
Query: 419 RALIYEYMPNGSLGDLLSREKENL---SLKPARL------------LEIALGVAHAIEYL 463
+I EY G L + L R++++ PA + L + VA + +L
Sbjct: 125 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 184
Query: 464 HNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N+LL K+ DFGLA+ + + V R + ++APE
Sbjct: 185 ASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPES 241
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEK 583
+ + +SDV+SYG+ L E+ + GS+ D + K+I K
Sbjct: 242 IFNCVY--TFESDVWSYGIFLWELF-----------SLGSSPYPGMPVDSKFYKMI---K 285
Query: 584 EDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
E F + +M + C +P RP+ ++V+++ +E+
Sbjct: 286 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 332
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 104/230 (45%), Gaps = 31/230 (13%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINE--VATIGRIHHVNIIHLL-- 410
E +G G YG VYKG D R VAVKV + NFINE + + + H NI +
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANR--QNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 411 --GFCCDGSTR-ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH--- 464
DG L+ EY PNGSL LS + + RL A V + YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDW-VSSCRL---AHSVTRGLAYLHTEL 131
Query: 465 ---NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV------TMTGPRGT 515
+ + I H D+ +NVL+ D T +SDFGL+ + NR V GT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 516 IGYIAPEIF-----MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETT 560
I Y+APE+ +R+ + + D+Y+ G++ E+ L P E+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 356 KLGTGGYGNVYKGKFP-----DGRLVAVKVLEKTS-NFSDNFINEVATIGRIHHVNIIHL 409
+LG G +G+V ++ G LVAVK L+ + + +F E+ + +H I+
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 410 LGFCCDGSTRAL--IYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
G ++L + EY+P+G L D L R + L +RLL + + +EYL +
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQICKGMEYLGS-- 145
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEIFMR 526
R +H D+ +N+L++ + K++DFGLAK ++ + P + I + APE
Sbjct: 146 -RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 204
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
N+ S +SDV+S+G++L E+
Sbjct: 205 NIF--SRQSDVWSFGVVLYELF 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 356 KLGTGGYGNVYKGKFP-----DGRLVAVKVLEKTS-NFSDNFINEVATIGRIHHVNIIHL 409
+LG G +G+V ++ G LVAVK L+ + + +F E+ + +H I+
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 410 LGFCCDGSTRAL--IYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
G ++L + EY+P+G L D L R + L +RLL + + +EYL +
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQICKGMEYLGS-- 132
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEIFMR 526
R +H D+ +N+L++ + K++DFGLAK ++ + P + I + APE
Sbjct: 133 -RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 191
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
N+ S +SDV+S+G++L E+
Sbjct: 192 NIF--SRQSDVWSFGVVLYELF 211
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 155/347 (44%), Gaps = 44/347 (12%)
Query: 308 FFKKPFSEERQNIGDGLNVKQFIKTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYK 367
+ +KP E + + + +N ++ + L ++ + + + F + LG G +G V +
Sbjct: 1 YLQKPMYEVQWKVVEEINGNNYVYIDPTQLPYDHKW-EFPRNRLSFGKTLGAGAFGKVVE 59
Query: 368 G------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNIIHLLGFCCDGST 418
K VAVK+L+ +++ ++ ++E+ + + +H+NI++LLG C G
Sbjct: 60 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 119
Query: 419 RALIYEYMPNGSLGDLLSREKENL---SLKPARL------------LEIALGVAHAIEYL 463
+I EY G L + L R++++ PA + L + VA + +L
Sbjct: 120 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 179
Query: 464 HNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEI 523
+ +H D+ +N+LL K+ DFGLA+ + + V R + ++APE
Sbjct: 180 ASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPES 236
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEK 583
+ + +SDV+SYG+ L E+ + GS+ D + K+I K
Sbjct: 237 IFNCVY--TFESDVWSYGIFLWELF-----------SLGSSPYPGMPVDSKFYKMI---K 280
Query: 584 EDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
E F + +M + C +P RP+ ++V+++ +E+
Sbjct: 281 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 327
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 356 KLGTGGYGNVYKGKFP-----DGRLVAVKVLEKTS-NFSDNFINEVATIGRIHHVNIIHL 409
+LG G +G+V ++ G LVAVK L+ + + +F E+ + +H I+
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 410 LGFCCDGSTRAL--IYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
G ++L + EY+P+G L D L R + L +RLL + + +EYL +
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQICKGMEYLGS-- 133
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEIFMR 526
R +H D+ +N+L++ + K++DFGLAK ++ + P + I + APE
Sbjct: 134 -RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 192
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
N+ S +SDV+S+G++L E+
Sbjct: 193 NIF--SRQSDVWSFGVVLYELF 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 18/203 (8%)
Query: 356 KLGTGGYGNVYKGKFP-----DGRLVAVKVLEKTS-NFSDNFINEVATIGRIHHVNIIHL 409
+LG G +G+V ++ G LVAVK L+ + + +F E+ + +H I+
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 410 LGFCCDGSTRA---LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
G G R L+ EY+P+G L D L R + L +RLL + + +EYL +
Sbjct: 74 RGVSY-GPGRPELRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQICKGMEYLGSR 130
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEIFM 525
R +H D+ +N+L++ + K++DFGLAK ++ + P + I + APE
Sbjct: 131 ---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 526 RNLGNPSGKSDVYSYGMLLLEMI 548
N+ S +SDV+S+G++L E+
Sbjct: 188 DNIF--SRQSDVWSFGVVLYELF 208
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 342 SYNDIKKMTNGFKEKLGTGGYGNVYKG-KFPDGRLVAVKVLE-KTSNFSDNFINEVATIG 399
S D KK F EK+G G G VY G+ VA++ + + + INE+ +
Sbjct: 15 SVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 73
Query: 400 RIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHA 459
+ NI++ L G ++ EY+ GSL D+++ + ++ + A
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQA 129
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGL-AKAHSRNRSVVTMTGPRGTIGY 518
+E+LH+ +++H +IK N+LL D + K++DFG A+ TM GT +
Sbjct: 130 LEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYW 183
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+APE+ R P K D++S G++ +EMIE
Sbjct: 184 MAPEVVTRKAYGP--KVDIWSLGIMAIEMIE 212
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 340 NYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVK-VLEKTSNFSDNFINEVAT 397
+Y Y++ NG + LG G YG VY G+ ++ +A+K + E+ S +S E+A
Sbjct: 18 DYEYDE-----NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72
Query: 398 IGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVA 457
+ H NI+ LG + + E +P GSL LL + L + +
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL 132
Query: 458 HAIEYLHNGCELRILHLDIKPQNVLLDP-DFTPKVSDFGLAKAHSR-NRSVVTMTGPRGT 515
++YLH+ +I+H DIK NVL++ K+SDFG +K + N T T GT
Sbjct: 133 EGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GT 186
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEM 547
+ Y+APEI + +D++S G ++EM
Sbjct: 187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEM 218
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 39/285 (13%)
Query: 356 KLGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNII 407
+LG G +G VY+G D VAVK + ++++ + F+NE + + +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR-------LLEIALGVAHAI 460
LLG G ++ E M +G L L + P R ++++A +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 461 EYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IGY 518
YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G + +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETAYYRKGGKGLLPVRW 198
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
+APE + S SD++S+G++L E+ + +P + S + ++ D
Sbjct: 199 MAPESLKDGVFTTS--SDMWSFGVVLWEITSLAE--QPYQGLSNEQVLK-----FVMDG- 248
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
++++ D+C R ++ + C Q NPK RP+ +V +L
Sbjct: 249 ------GYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLL 286
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 31/282 (10%)
Query: 355 EKLGTGGYGNVYKGKF--PDGRLVAVKV------LEKTSNFSDNFINEVATIGRIHHVNI 406
EKLG G +G V +G++ P G+ V+V V + D+FI EV + + H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L G + ++ E P GSL D L + + + L L A+ VA + YL +
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 134
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT-IGYIAPEIFM 525
R +H D+ +N+LL K+ DFGL +A +N M R + APE
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKED 585
S SD + +G+ L EM + P +GS D ++L +PE
Sbjct: 192 TR--TFSHASDTWMFGVTLWEMFTYGQ--EPWIGLNGSQILHKI--DKEGERLPRPE--- 242
Query: 586 FVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSAS 627
DC + + V + C P+DRP+ + + L A
Sbjct: 243 ------DC-PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 277
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 39/285 (13%)
Query: 356 KLGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNII 407
+LG G +G VY+G D VAVK + ++++ + F+NE + + +++
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR-------LLEIALGVAHAI 460
LLG G ++ E M +G L L + P R ++++A +A +
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 461 EYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IGY 518
YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G + +
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 195
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
+APE + S SD++S+G++L E+ + +P + S + ++ D
Sbjct: 196 MAPESLKDGVFTTS--SDMWSFGVVLWEITSLAE--QPYQGLSNEQVLK-----FVMDG- 245
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
++++ D+C R ++ + C Q NPK RP+ +V +L
Sbjct: 246 ------GYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLL 283
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 48/306 (15%)
Query: 353 FKEKLGTGGYGNVYK------GKFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HH 403
F + LG G +G V + GK VAVK+L+ T++ + ++E+ + + H
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 404 VNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENL---SLKPAR------------ 448
NI++LLG C G +I EY G L + L R+ E + SL P +
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 449 -----LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN 503
LL + VA + +L + +H D+ +NVLL K+ DFGLA+ +
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 504 RSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGS 563
+ + R + ++APE + + +SDV+SYG+LL E+ + G
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCV--YTVQSDVWSYGILLWEIF-----------SLGL 258
Query: 564 NTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
N + + KL+ K+ + + + + + C + P RP+ ++ L
Sbjct: 259 NPYPGILVNSKFYKLV---KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 315
Query: 624 SSASAE 629
+ E
Sbjct: 316 QEQAQE 321
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 31/282 (10%)
Query: 355 EKLGTGGYGNVYKGKF--PDGRLVAVKV------LEKTSNFSDNFINEVATIGRIHHVNI 406
EKLG G +G V +G++ P G+ V+V V + D+FI EV + + H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L G + ++ E P GSL D L + + + L L A+ VA + YL +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 140
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT-IGYIAPEIFM 525
R +H D+ +N+LL K+ DFGL +A +N M R + APE
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKED 585
S SD + +G+ L EM + P +GS D ++L +PE
Sbjct: 198 TR--TFSHASDTWMFGVTLWEMFTYGQ--EPWIGLNGSQILHKI--DKEGERLPRPE--- 248
Query: 586 FVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSAS 627
DC + + V + C P+DRP+ + + L A
Sbjct: 249 ------DC-PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 31/282 (10%)
Query: 355 EKLGTGGYGNVYKGKF--PDGRLVAVKV------LEKTSNFSDNFINEVATIGRIHHVNI 406
EKLG G +G V +G++ P G+ V+V V + D+FI EV + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L G + ++ E P GSL D L + + + L L A+ VA + YL +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 130
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT-IGYIAPEIFM 525
R +H D+ +N+LL K+ DFGL +A +N M R + APE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKED 585
S SD + +G+ L EM + P +GS D ++L +PE
Sbjct: 188 TR--TFSHASDTWMFGVTLWEMFTYGQ--EPWIGLNGSQILHKI--DKEGERLPRPE--- 238
Query: 586 FVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSAS 627
DC + + V + C P+DRP+ + + L A
Sbjct: 239 ------DC-PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 31/282 (10%)
Query: 355 EKLGTGGYGNVYKGKF--PDGRLVAVKV------LEKTSNFSDNFINEVATIGRIHHVNI 406
EKLG G +G V +G++ P G+ V+V V + D+FI EV + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L G + ++ E P GSL D L + + + L L A+ VA + YL +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 130
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT-IGYIAPEIFM 525
R +H D+ +N+LL K+ DFGL +A +N M R + APE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKED 585
S SD + +G+ L EM + P +GS D ++L +PE
Sbjct: 188 TR--TFSHASDTWMFGVTLWEMFTYGQ--EPWIGLNGSQILHKI--DKEGERLPRPE--- 238
Query: 586 FVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSAS 627
DC + + V + C P+DRP+ + + L A
Sbjct: 239 ------DC-PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 31/282 (10%)
Query: 355 EKLGTGGYGNVYKGKF--PDGRLVAVKV------LEKTSNFSDNFINEVATIGRIHHVNI 406
EKLG G +G V +G++ P G+ V+V V + D+FI EV + + H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L G + ++ E P GSL D L + + + L L A+ VA + YL +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 140
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT-IGYIAPEIFM 525
R +H D+ +N+LL K+ DFGL +A +N M R + APE
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKED 585
S SD + +G+ L EM + P +GS D ++L +PE
Sbjct: 198 TR--TFSHASDTWMFGVTLWEMFTYGQ--EPWIGLNGSQILHKI--DKEGERLPRPE--- 248
Query: 586 FVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSAS 627
DC + + V + C P+DRP+ + + L A
Sbjct: 249 ------DC-PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 39/285 (13%)
Query: 356 KLGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNII 407
+LG G +G VY+G D VAVK + ++++ + F+NE + + +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR-------LLEIALGVAHAI 460
LLG G ++ E M +G L L + P R ++++A +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 461 EYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG--TIGY 518
YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G + +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 198
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
+APE + S SD++S+G++L E+ + +P + S + ++ D
Sbjct: 199 MAPESLKDGVFTTS--SDMWSFGVVLWEITSLAE--QPYQGLSNEQVLK-----FVMDG- 248
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
++++ D+C R ++ + C Q NPK RP+ +V +L
Sbjct: 249 ------GYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLL 286
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 124/283 (43%), Gaps = 33/283 (11%)
Query: 355 EKLGTGGYGNVYKGKF--PDGRLVAVKV------LEKTSNFSDNFINEVATIGRIHHVNI 406
EKLG G +G V +G++ P G+ V+V V + D+FI EV + + H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L G + ++ E P GSL D L + + + L L A+ VA + YL +
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 134
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT-IGYIAPE-IF 524
R +H D+ +N+LL K+ DFGL +A +N M R + APE +
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKE 584
R S SD + +G+ L EM + P +GS D ++L +PE
Sbjct: 192 TRTF---SHASDTWMFGVTLWEMFTYGQE--PWIGLNGSQILHKI--DKEGERLPRPE-- 242
Query: 585 DFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSAS 627
DC + + V + C P+DRP+ + + L A
Sbjct: 243 -------DC-PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 277
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 31/282 (10%)
Query: 355 EKLGTGGYGNVYKGKF--PDGRLVAVKV------LEKTSNFSDNFINEVATIGRIHHVNI 406
EKLG G +G V +G++ P G+ V+V V + D+FI EV + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L G + ++ E P GSL D L + + + L L A+ VA + YL +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 130
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT-IGYIAPEIFM 525
R +H D+ +N+LL K+ DFGL +A +N M R + APE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKED 585
S SD + +G+ L EM + P +GS D ++L +PE
Sbjct: 188 TR--TFSHASDTWMFGVTLWEMFTYGQ--EPWIGLNGSQILHKI--DKEGERLPRPE--- 238
Query: 586 FVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSAS 627
DC + + V + C P+DRP+ + + L A
Sbjct: 239 ------DC-PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 32/218 (14%)
Query: 357 LGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
LG G +G V K + D R A+K + T ++EV + ++H ++ +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 416 -------------GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
ST + EY N +L DL+ ENL+ + + + A+ Y
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI--HSENLNQQRDEYWRLFRQILEALSY 131
Query: 463 LHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV------------TMT 510
+H+ I+H D+KP N+ +D K+ DFGLAK R+ ++ +T
Sbjct: 132 IHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
GT Y+A E+ + G+ + K D+YS G++ EMI
Sbjct: 189 SAIGTAMYVATEV-LDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 21/198 (10%)
Query: 353 FKEKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNFI-NEVATIGRIHHVNIIHLL 410
F E LG+G + V+ K G+L A+K ++K+ F D+ + NE+A + +I H NI+ L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH-NGCEL 469
+ L+ + + G L D + E+ + K A L + V A++YLH NG
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRI-LERGVYTEKDASL--VIQQVLSAVKYLHENG--- 126
Query: 470 RILHLDIKPQNVL-LDPDFTPK--VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I+H D+KP+N+L L P+ K ++DFGL+K M+ GT GY+APE+ +
Sbjct: 127 -IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQ 181
Query: 527 NLGNPSGKS-DVYSYGML 543
P K+ D +S G++
Sbjct: 182 ---KPYSKAVDCWSIGVI 196
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 49/287 (17%)
Query: 357 LGTGGYGNVYKGK--FPDGRL----VAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G V K GR VAVK+L++ ++ S+ + ++E + +++H ++I
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------------ENLSLKPA 447
L G C LI EY GSL L + + +L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
L+ A ++ ++YL E++++H D+ +N+L+ K+SDFGL++ S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
+ R + ++A E ++ + +SDV+S+G+LL E++ T G N
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIY--TTQSDVWSFGVLLWEIV-----------TLGGNPYP 254
Query: 568 AYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRP 614
P+ +++ L + +E D+C + +M + L C + P RP
Sbjct: 255 GIPPERLFNLLKTGHR---MERPDNC-SEEMYRLMLQCWKQEPDKRP 297
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 49/287 (17%)
Query: 357 LGTGGYGNVYKGK--FPDGRL----VAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G V K GR VAVK+L++ ++ S+ + ++E + +++H ++I
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------------ENLSLKPA 447
L G C LI EY GSL L + + +L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
L+ A ++ ++YL E++++H D+ +N+L+ K+SDFGL++ S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
+ R + ++A E ++ + +SDV+S+G+LL E++ T G N
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIY--TTQSDVWSFGVLLWEIV-----------TLGGNPYP 254
Query: 568 AYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRP 614
P+ +++ L + +E D+C + +M + L C + P RP
Sbjct: 255 GIPPERLFNLLKTGHR---MERPDNC-SEEMYRLMLQCWKQEPDKRP 297
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 24/209 (11%)
Query: 344 NDIKKMTNGFKEKLGTGGYGNVYKGKFPDGR---LVAVKVLEKTS--NFSDNFINEVATI 398
DI+ + + F++ LGTG + V + D R LVA+K + K + + NE+A +
Sbjct: 14 EDIRDIYD-FRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
+I H NI+ L G LI + + G L D + + +RL+ V
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---FQVLD 127
Query: 459 AIEYLHNGCELRILHLDIKPQNVL---LDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
A++YLH+ L I+H D+KP+N+L LD D +SDFGL+K + T GT
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC---GT 181
Query: 516 IGYIAPEIFMRNLGNPSGKS-DVYSYGML 543
GY+APE+ + P K+ D +S G++
Sbjct: 182 PGYVAPEVLAQ---KPYSKAVDCWSIGVI 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 15/215 (6%)
Query: 337 LLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL-VAVK-VLEKTSNFSDNFINE 394
L +Y Y++ NG + LG G YG VY G+ ++ +A+K + E+ S +S E
Sbjct: 1 LEYDYEYDE-----NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEE 55
Query: 395 VATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIAL 454
+A + H NI+ LG + + E +P GSL LL + L +
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 115
Query: 455 GVAHAIEYLHNGCELRILHLDIKPQNVLLDP-DFTPKVSDFGLAKAHSR-NRSVVTMTGP 512
+ ++YLH+ +I+H DIK NVL++ K+SDFG +K + N T T
Sbjct: 116 QILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-- 170
Query: 513 RGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEM 547
GT+ Y+APEI + +D++S G ++EM
Sbjct: 171 -GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEM 204
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GX 178
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 39/285 (13%)
Query: 356 KLGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNII 407
+LG G +G VY+G D VAVK + ++++ + F+NE + + +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR-------LLEIALGVAHAI 460
LLG G ++ E M +G L L + P R ++++A +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 461 EYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IGY 518
YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G + +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 198
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
+APE + S SD++S+G++L E+ + +P + S + ++ D
Sbjct: 199 MAPESLKDGVFTTS--SDMWSFGVVLWEITSLAE--QPYQGLSNEQVLK-----FVMDG- 248
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
++++ D+C R ++ + C Q NPK RP+ +V +L
Sbjct: 249 ------GYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLL 286
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 24/209 (11%)
Query: 344 NDIKKMTNGFKEKLGTGGYGNVYKGKFPDGR---LVAVKVLEKTS--NFSDNFINEVATI 398
DI+ + + F++ LGTG + V + D R LVA+K + K + + NE+A +
Sbjct: 14 EDIRDIYD-FRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
+I H NI+ L G LI + + G L D + + +RL+ V
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---FQVLD 127
Query: 459 AIEYLHNGCELRILHLDIKPQNVL---LDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
A++YLH+ L I+H D+KP+N+L LD D +SDFGL+K + T GT
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC---GT 181
Query: 516 IGYIAPEIFMRNLGNPSGKS-DVYSYGML 543
GY+APE+ + P K+ D +S G++
Sbjct: 182 PGYVAPEVLAQ---KPYSKAVDCWSIGVI 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 24/209 (11%)
Query: 344 NDIKKMTNGFKEKLGTGGYGNVYKGKFPDGR---LVAVKVLEKTS--NFSDNFINEVATI 398
DI+ + + F++ LGTG + V + D R LVA+K + K + + NE+A +
Sbjct: 14 EDIRDIYD-FRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
+I H NI+ L G LI + + G L D + + +RL+ V
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---FQVLD 127
Query: 459 AIEYLHNGCELRILHLDIKPQNVL---LDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
A++YLH+ L I+H D+KP+N+L LD D +SDFGL+K + T GT
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC---GT 181
Query: 516 IGYIAPEIFMRNLGNPSGKS-DVYSYGML 543
GY+APE+ + P K+ D +S G++
Sbjct: 182 PGYVAPEVLAQ---KPYSKAVDCWSIGVI 207
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 128/299 (42%), Gaps = 41/299 (13%)
Query: 353 FKEKLGTGGYGNVYK------GKFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HH 403
F + LG G +G V + GK VAVK+L+ T++ + ++E+ + + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 404 VNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKE-------NLSLKPAR------LL 450
NI++LLG C G +I EY G L + L R++ N S P LL
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+ VA + +L +H D+ +NVLL K+ DFGLA+ + + +
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+SYG+LL E+ + G N
Sbjct: 227 NARLPVKWMAPESIFDCVY--TVQSDVWSYGILLWEIF-----------SLGLNPYPGIL 273
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
+ + KL+ K+ + + + + + C + P RP+ ++ L + E
Sbjct: 274 VNSKFYKLV---KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 329
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 411 GFCCDGSTRALIYEYMPN--GSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GC 178
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 411 GFCCDGSTRALIYEYMPN--GSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 121
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GC 177
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 70 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 124 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GC 179
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 153/345 (44%), Gaps = 44/345 (12%)
Query: 310 KKPFSEERQNIGDGLNVKQFIKTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKG- 368
+KP E + + + +N + + L ++ + + + F + LG G +G V +
Sbjct: 1 QKPMYEVQWKVVEEINGNNXVXIDPTQLPYDHKW-EFPRNRLSFGKTLGAGAFGKVVEAT 59
Query: 369 -----KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNIIHLLGFCCDGSTRA 420
K VAVK+L+ +++ ++ ++E+ + + +H+NI++LLG C G
Sbjct: 60 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 119
Query: 421 LIYEYMPNGSLGDLLSREKENL---SLKPARL------------LEIALGVAHAIEYLHN 465
+I EY G L + L R++++ PA + L + VA + +L +
Sbjct: 120 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 179
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM 525
+H D+ +N+LL K+ DFGLA+ + + V R + ++APE
Sbjct: 180 K---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 236
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKED 585
+ + +SDV+SYG+ L E+ + GS+ D + K+I KE
Sbjct: 237 NCVY--TFESDVWSYGIFLWELF-----------SLGSSPYPGMPVDSKFYKMI---KEG 280
Query: 586 FVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAEA 630
F + +M + C +P RP+ ++V+++ +E+
Sbjct: 281 FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 325
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 121
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GC 177
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 16/222 (7%)
Query: 331 KTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNV-YKGKFPDGRLVAVKVLE-KTSNFS 388
+ +R+AL S D ++ F K+G G G V + G+ VAVK ++ +
Sbjct: 28 EQFRAALQLVVSPGDPREYLANFI-KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR 86
Query: 389 DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR 448
+ NEV + HH N++ + G ++ E++ G+L D+++ + N +
Sbjct: 87 ELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMN----EEQ 142
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVT 508
+ + L V A+ YLHN ++H DIK ++LL D K+SDFG S+ V
Sbjct: 143 IATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPK 197
Query: 509 MTGPRGTIGYIAPEIFMRNLGNPSG-KSDVYSYGMLLLEMIE 549
GT ++APE+ R P G + D++S G++++EMI+
Sbjct: 198 RKXLVGTPYWMAPEVISR---LPYGTEVDIWSLGIMVIEMID 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 24/209 (11%)
Query: 344 NDIKKMTNGFKEKLGTGGYGNVYKGKFPDGR---LVAVKVLEKTS--NFSDNFINEVATI 398
DI+ + + F++ LGTG + V + D R LVA+K + K + + NE+A +
Sbjct: 14 EDIRDIYD-FRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
+I H NI+ L G LI + + G L D + + +RL+ V
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---FQVLD 127
Query: 459 AIEYLHNGCELRILHLDIKPQNVL---LDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
A++YLH+ L I+H D+KP+N+L LD D +SDFGL+K + T GT
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC---GT 181
Query: 516 IGYIAPEIFMRNLGNPSGKS-DVYSYGML 543
GY+APE+ + P K+ D +S G++
Sbjct: 182 PGYVAPEVLAQ---KPYSKAVDCWSIGVI 207
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 39/285 (13%)
Query: 356 KLGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNII 407
+LG G +G VY+G D VAVK + ++++ + F+NE + + +++
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR-------LLEIALGVAHAI 460
LLG G ++ E M +G L L + P R ++++A +A +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 461 EYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IGY 518
YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G + +
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 197
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
+APE + S SD++S+G++L E+ + +P + S + ++ D
Sbjct: 198 MAPESLKDGVFTTS--SDMWSFGVVLWEITSLAE--QPYQGLSNEQVLK-----FVMDG- 247
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
++++ D+C R ++ + C Q NPK RP+ +V +L
Sbjct: 248 ------GYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLL 285
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 76 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 129
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 130 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GX 185
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 73 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 126
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 127 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GC 182
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 29/205 (14%)
Query: 357 LGTGGYGNVY---KGKFPD-GRLVAVKVLEKTSNFSDNFIN---EVATIGRIHHVNIIHL 409
LG G +G V+ K PD G L A+KVL+K + + + E + ++H ++ L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 410 -LGFCCDGSTRALIYEYMPNGSLGDLLSRE----KENLSLKPARLLEIALGVAHAIEYLH 464
F +G LI +++ G L LS+E +E++ L E+ALG+ H LH
Sbjct: 96 HYAFQTEGKL-YLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELALGLDH----LH 147
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEI 523
+ L I++ D+KP+N+LLD + K++DFGL+K A + + GT+ Y+APE+
Sbjct: 148 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC---GTVEYMAPEV 201
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
R S +D +SYG+L+ EM+
Sbjct: 202 VNRQ--GHSHSADWWSYGVLMFEML 224
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GC 178
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 25/198 (12%)
Query: 357 LGTGGYGNVYKGKFPDGRLV----AVKVLEKTS---NFSDNFINEVATIGRIHHVNIIHL 409
LG G +G V K K R+ AVKV+ K S + + EV + ++ H NI+ L
Sbjct: 30 LGKGSFGEVLKCK---DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
D S+ ++ E G L D + + K AR+++ V I Y+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK---QVFSGITYMHKH--- 140
Query: 470 RILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I+H D+KP+N+LL + D K+ DFGL+ +N M GT YIAPE+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR- 196
Query: 527 NLGNPSGKSDVYSYGMLL 544
G K DV+S G++L
Sbjct: 197 --GTYDEKCDVWSAGVIL 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 411 GFCCDGSTRALIYEYMPN--GSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 76 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 129
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 130 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GC 185
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 129/287 (44%), Gaps = 36/287 (12%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY---L 463
+LLG C G +I E+ G+L L R K N + L + L + H I Y +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 464 HNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYI 519
G E + +H D+ +N+LL K+ DFGLA+ ++ V R + ++
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWM 213
Query: 520 APE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE IF R + +SDV+S+G+LL E+ S Y I ++
Sbjct: 214 APETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKIDEEF 256
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
+ KE D +M L C P RP+ + +VE L +
Sbjct: 257 XRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 303
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 184 FH-AEPVDVWSCGIVLTAML 202
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ + D + L L + L ++ G+A + H+
Sbjct: 68 DVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 121
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GC 177
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKEN---LSLKPARLLEIALGVAHAIEYLHNGC 467
+ L++E++ + L D + L L + L ++ G+A + H+
Sbjct: 71 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH- 124
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-G 179
Query: 528 LGNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 26/205 (12%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL---VAVKVL-----EKTSNFSDNFINEVATIGRIHHVNI 406
+KLG GG VY + D L VA+K + EK F EV ++ H NI
Sbjct: 17 DKLGGGGMSTVYLAE--DTILNIKVAIKAIFIPPREKEETLK-RFEREVHNSSQLSHQNI 73
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL--EIALGVAHAIEYLH 464
+ ++ + L+ EY+ +L + + LS+ A +I G+ HA
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP-LSVDTAINFTNQILDGIKHA----- 127
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
++RI+H DIKPQN+L+D + T K+ DFG+AKA S S+ GT+ Y +PE
Sbjct: 128 --HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-SLTQTNHVLGTVQYFSPE-- 182
Query: 525 MRNLGNPSGK-SDVYSYGMLLLEMI 548
+ G + + +D+YS G++L EM+
Sbjct: 183 -QAKGEATDECTDIYSIGIVLYEML 206
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 49/287 (17%)
Query: 357 LGTGGYGNVYKGK--FPDGRL----VAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIH 408
LG G +G V K GR VAVK+L++ ++ S+ + ++E + +++H ++I
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------------ENLSLKPA 447
L G C LI EY GSL L + + +L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
L+ A ++ ++YL E+ ++H D+ +N+L+ K+SDFGL++ S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
+ R + ++A E ++ + +SDV+S+G+LL E++ T G N
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIY--TTQSDVWSFGVLLWEIV-----------TLGGNPYP 254
Query: 568 AYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRP 614
P+ +++ L + +E D+C + +M + L C + P RP
Sbjct: 255 GIPPERLFNLLKTGHR---MERPDNC-SEEMYRLMLQCWKQEPDKRP 297
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 117/284 (41%), Gaps = 44/284 (15%)
Query: 329 FIKTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF------PDGRLVAVKVLE 382
I ++ A L S + ++ F E+LG +G VYKG + VA+K L+
Sbjct: 11 LINQHKQAKLKEISLSAVR-----FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK 65
Query: 383 KTSN--FSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKE 440
+ + F +E R+ H N++ LLG ++I+ Y +G L + L
Sbjct: 66 DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 125
Query: 441 N-------------LSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDF 487
+ +L+P + + +A +EYL + ++H D+ +NVL+
Sbjct: 126 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182
Query: 488 TPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEM 547
K+SD GL + + I ++APE M G S SD++SYG++L E+
Sbjct: 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 240
Query: 548 IEEKKHLRPTETTSGSNTTEAYF-----------PDWIYDKLIQ 580
L+P S + E P W+Y +I+
Sbjct: 241 FSYG--LQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIE 282
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 43/302 (14%)
Query: 353 FKEKLGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HH 403
F + LG G +G V + K VAVK+L+ +++ ++ ++E+ + + +H
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 404 VNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENL---SLKPARL----------- 449
+NI++LLG C G +I EY G L + L R++++ PA +
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 450 -LEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVT 508
L + VA + +L + +H D+ +N+LL K+ DFGLA+ + + V
Sbjct: 147 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
Query: 509 MTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEA 568
R + ++APE + + +SDV+SYG+ L E+ + GS+
Sbjct: 204 KGNARLPVKWMAPESIFNCVY--TFESDVWSYGIFLWELF-----------SLGSSPYPG 250
Query: 569 YFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASA 628
D + K+I KE F + +M + C +P RP+ ++V+++ +
Sbjct: 251 MPVDSKFYKMI---KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307
Query: 629 EA 630
E+
Sbjct: 308 ES 309
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 184 FH-AEPVDVWSCGIVLTAML 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKEN---LSLKPARLLEIALGVAHAIEYLHNGC 467
+ L++E++ + L D + L L + L ++ G+A + H+
Sbjct: 72 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH- 125
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-G 180
Query: 528 LGNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 47/241 (19%)
Query: 341 YSYNDIKKMTNGFKEKLGTGGYGNVYKGKFP------DGRLVAVKVL--EKTSNFSDNFI 392
Y N+I+ + +G G +G V++ + P +VAVK+L E +++ +F
Sbjct: 44 YPRNNIE-----YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ 98
Query: 393 NEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLL---------SREKENLS 443
E A + + NI+ LLG C G L++EYM G L + L S +LS
Sbjct: 99 REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 158
Query: 444 ------------LKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKV 491
L A L IA VA + YL E + +H D+ +N L+ + K+
Sbjct: 159 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKI 215
Query: 492 SDFGLAKAHSRNRSVVTMTGPRGT----IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEM 547
+DFGL SRN G I ++ PE N + +SDV++YG++L E+
Sbjct: 216 ADFGL----SRNIYSADYYKADGNDAIPIRWMPPESIFYN--RYTTESDVWAYGVVLWEI 269
Query: 548 I 548
Sbjct: 270 F 270
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 130/285 (45%), Gaps = 39/285 (13%)
Query: 356 KLGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNII 407
+LG G +G VY+G D VAVK + ++++ + F+NE + + +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR-------LLEIALGVAHAI 460
LLG G ++ E M +G L L + P R ++++A +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 461 EYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG--TIGY 518
YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G + +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 198
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
+APE + S SD++S+G++L E+ + +P + S + ++ D
Sbjct: 199 MAPESLKDGVFTTS--SDMWSFGVVLWEITSLAE--QPYQGLSNEQVLK-----FVMDG- 248
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
++++ D+C R ++ + C Q NP RP+ +V +L
Sbjct: 249 ------GYLDQPDNCPERVTDLMRM-CWQFNPNMRPTFLEIVNLL 286
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 184 FH-AEPVDVWSCGIVLTAML 202
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 25/198 (12%)
Query: 357 LGTGGYGNVYKGKFPDGRLV----AVKVLEKTS---NFSDNFINEVATIGRIHHVNIIHL 409
LG G +G V K K R+ AVKV+ K S + + EV + ++ H NI+ L
Sbjct: 30 LGKGSFGEVLKCK---DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
D S+ ++ E G L D + + K AR+++ V I Y+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK---QVFSGITYMHKH--- 140
Query: 470 RILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I+H D+KP+N+LL + D K+ DFGL+ +N M GT YIAPE+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR- 196
Query: 527 NLGNPSGKSDVYSYGMLL 544
G K DV+S G++L
Sbjct: 197 --GTYDEKCDVWSAGVIL 212
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
E +G G YG V++G + G VAVK+ S E+ + H NI LGF
Sbjct: 14 ECVGKGRYGEVWRGLW-HGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNI---LGFIA 69
Query: 415 -DGSTR------ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH--- 464
D ++R LI Y +GSL D L R+ +L+P L +A+ A + +LH
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ----TLEPHLALRLAVSAACGLAHLHVEI 125
Query: 465 --NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTM-TGPR-GTIGYIA 520
+ I H D K +NVL+ + ++D GLA HS+ + + PR GT Y+A
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 521 PEIFMRNLGNPSGKS----DVYSYGMLLLEM 547
PE+ + +S D++++G++L E+
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 11 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 68 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 121
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 182 FH-AEPVDVWSCGIVLTAML 200
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 127/296 (42%), Gaps = 44/296 (14%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K VAVK+L+ + D + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKE---NLSLKPAR----------LLEI 452
II+LLG C +I EY G+L + L + S P+ L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 453 ALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP 512
A VA +EYL + + +H D+ +NVL+ D K++DFGLA+ T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 513 RGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPD 572
R + ++APE + + +SDV+S+G+LL E+ T GS +P
Sbjct: 213 RLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIF----------TLGGSP-----YPG 255
Query: 573 WIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASA 628
++L + KE ++ ++ ++ C P RP+ ++VE L A
Sbjct: 256 VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 25/198 (12%)
Query: 357 LGTGGYGNVYKGKFPDGRLV----AVKVLEKTS---NFSDNFINEVATIGRIHHVNIIHL 409
LG G +G V K K R+ AVKV+ K S + + EV + ++ H NI+ L
Sbjct: 30 LGKGSFGEVLKCK---DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
D S+ ++ E G L D + + K AR+++ V I Y+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK---QVFSGITYMHKH--- 140
Query: 470 RILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I+H D+KP+N+LL + D K+ DFGL+ +N M GT YIAPE+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR- 196
Query: 527 NLGNPSGKSDVYSYGMLL 544
G K DV+S G++L
Sbjct: 197 --GTYDEKCDVWSAGVIL 212
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 44/296 (14%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K VAVK+L+ + D + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLL-SREKENL--SLKPAR----------LLEI 452
II+LLG C +I EY G+L + L +RE L S P+ L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 453 ALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP 512
A VA +EYL + + +H D+ +NVL+ D K++DFGLA+ T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 513 RGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPD 572
R + ++APE + + +SDV+S+G+LL E+ T GS +P
Sbjct: 213 RLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIF----------TLGGSP-----YPG 255
Query: 573 WIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASA 628
++L + KE ++ ++ ++ C P RP+ ++VE L A
Sbjct: 256 VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 184 FH-AEPVDVWSCGIVLTAML 202
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 184 FH-AEPVDVWSCGIVLTAML 202
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 184 FH-AEPVDVWSCGIVLTAML 202
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 131/289 (45%), Gaps = 37/289 (12%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLL-SREKENLSLK-PARLLEIALGVAHAIEY-- 462
+LLG C G +I E+ G+L L S+ E + K P L + L + H I Y
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 463 -LHNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIG 517
+ G E + +H D+ +N+LL K+ DFGLA+ ++ V R +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 518 YIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYD 576
++APE IF R + +SDV+S+G+LL E+ S Y I +
Sbjct: 216 WMAPETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKIDE 258
Query: 577 KLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
+ + KE D +M L C P RP+ + +VE L +
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIAL-GVAHAIEYLHNGCEL 469
+ L++E++ + L + + L+ P L++ L + + + H+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLSFCHSH--- 122
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GCK 179
Query: 530 NPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLLSREKEN----LSLKPARLLEIALGVAHAIEY 462
+LLG C G +I E+ G+L L R K N + P L + L + H I Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 463 ---LHNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
+ G E + +H D+ +N+LL K+ DFGLA+ ++ V R
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 516 IGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWI 574
+ ++APE IF R + +SDV+S+G+LL E+ S Y I
Sbjct: 214 LKWMAPETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKI 256
Query: 575 YDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
++ + KE D +M L C P RP+ + +VE L +
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 50/310 (16%)
Query: 353 FKEKLGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HH 403
F + LG+G +G V K VAVK+L++ ++ S+ ++E+ + ++ H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 404 VNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLS-------------------- 443
NI++LLG C LI+EY G L + L ++E S
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 444 LKPARLLEIALGVAHAIEYLH-NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSR 502
L LL A VA +E+L C +H D+ +NVL+ K+ DFGLA+
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 503 NRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG 562
+ + V R + ++APE G + KSDV+SYG+LL E+ + G
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWEIF-----------SLG 271
Query: 563 SNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEM 622
N D + KLIQ F ++ ++ I+ C + + RPS +
Sbjct: 272 VNPYPGIPVDANFYKLIQ---NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 328
Query: 623 LSSASAEAIE 632
L A+A E
Sbjct: 329 LGCQLADAEE 338
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 184 FH-AEPVDVWSCGIVLTAML 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 357 LGTGGYGNVYKGKFPD---GRL-VAVKVLEKTSNFS--DNFINEVATIGRIHHVNIIHLL 410
+G G +G VY G++ D R+ A+K L + + + F+ E + ++H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 411 GFCC--DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G L+ YM +G L + + N ++K L+ L VA +EYL E
Sbjct: 89 GIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVK--DLISFGLQVARGMEYL---AE 142
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAK--AHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
+ +H D+ +N +LD FT KV+DFGLA+ SV R + + A E
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL-- 200
Query: 527 NLGNPSGKSDVYSYGMLLLEMIEE----KKHLRPTETT----SGSNTTE-AYFPDWIYDK 577
+ KSDV+S+G+LL E++ +H+ P + T G + Y PD +Y
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQV 260
Query: 578 LIQ 580
+ Q
Sbjct: 261 MQQ 263
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 13 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 70 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 184 FH-AEPVDVWSCGIVLTAML 202
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 14/221 (6%)
Query: 331 KTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFP-DGRLVAVKVLE-KTSNFS 388
+ +++AL D + + + + K+G G G V + GR VAVK+++ +
Sbjct: 28 EQFKAALRMVVDQGDPRLLLDSYV-KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR 86
Query: 389 DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR 448
+ NEV + H N++ + G ++ E++ G+L D++S+ + L +
Sbjct: 87 ELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQ 142
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVT 508
+ + V A+ YLH ++H DIK ++LL D K+SDFG S++ V
Sbjct: 143 IATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPK 197
Query: 509 MTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
GT ++APE+ R+L + + D++S G++++EM++
Sbjct: 198 RKXLVGTPYWMAPEVISRSLY--ATEVDIWSLGIMVIEMVD 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLLSREKEN----LSLKPARLLEIALGVAHAIEY 462
+LLG C G +I E+ G+L L R K N + P L + L + H I Y
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 463 ---LHNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
+ G E + +H D+ +N+LL K+ DFGLA+ ++ V R
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 516 IGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWI 574
+ ++APE IF R + +SDV+S+G+LL E+ S Y I
Sbjct: 205 LKWMAPETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKI 247
Query: 575 YDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
++ + KE D +M L C P RP+ + +VE L +
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
EKLG G YG+VYK + G++VA+K + S+ + I E++ + + +++ G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE-IIKEISIMQQCDSPHVVKYYGSY 93
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ ++ EY GS+ D++ N +L + I +EYLH +R +H
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHF---MRKIH 148
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLA-----KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
DIK N+LL+ + K++DFG+A RN + GT ++APE+ ++ +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-------GTPFWMAPEV-IQEI 200
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
G + +D++S G+ +EM E K
Sbjct: 201 GY-NCVADIWSLGITAIEMAEGK 222
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVA---VKVLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA +++ +T I E++ + ++H NI+ LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GC 178
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVA---VKVLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA +++ +T I E++ + ++H NI+ LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 121
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T T+ Y APEI +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GC 177
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G YG V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLLSREKEN----LSLKPARLLEIALGVAHAIEY 462
+LLG C G +I E+ G+L L R K N + P L + L + H I Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 463 ---LHNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
+ G E + +H D+ +N+LL K+ DFGLA+ ++ V R
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 516 IGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWI 574
+ ++APE IF R + +SDV+S+G+LL E+ S Y I
Sbjct: 205 LKWMAPETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKI 247
Query: 575 YDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
++ + KE D +M L C P RP+ + +VE L +
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLLSREKEN----LSLKPARLLEIALGVAHAIEY 462
+LLG C G +I E+ G+L L R K N + P L + L + H I Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 463 ---LHNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
+ G E + +H D+ +N+LL K+ DFGLA+ ++ V R
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 516 IGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWI 574
+ ++APE IF R + +SDV+S+G+LL E+ S Y I
Sbjct: 205 LKWMAPETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKI 247
Query: 575 YDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
++ + KE D +M L C P RP+ + +VE L +
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLLSREKEN----LSLKPARLLEIALGVAHAIEY 462
+LLG C G +I E+ G+L L R K N + P L + L + H I Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 463 ---LHNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
+ G E + +H D+ +N+LL K+ DFGLA+ ++ V R
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 213
Query: 516 IGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWI 574
+ ++APE IF R + +SDV+S+G+LL E+ S Y I
Sbjct: 214 LKWMAPETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKI 256
Query: 575 YDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
++ + KE D +M L C P RP+ + +VE L +
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K VAVK+L+ + D + I+E+ + I H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E LS K L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK--DLV 138
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
A VA +EYL + + +H D+ +NVL+ D K++DFGLA+ T
Sbjct: 139 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+LL E+ T GS +
Sbjct: 196 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIF----------TLGGSP-----Y 238
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASA 628
P ++L + KE ++ ++ ++ C P RP+ ++VE L A
Sbjct: 239 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 178
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLLSREKEN----LSLKPARLLEIALGVAHAIEY 462
+LLG C G +I E+ G+L L R K N + P L + L + H I Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 463 ---LHNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
+ G E + +H D+ +N+LL K+ DFGLA+ ++ V R
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP 213
Query: 516 IGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWI 574
+ ++APE IF R + +SDV+S+G+LL E+ S Y I
Sbjct: 214 LKWMAPETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKI 256
Query: 575 YDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
++ + KE D +M L C P RP+ + +VE L +
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLLSREKEN----LSLKPARLLEIALGVAHAIEY 462
+LLG C G +I E+ G+L L R K N + P L + L + H I Y
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 463 ---LHNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
+ G E + +H D+ +N+LL K+ DFGLA+ ++ V R
Sbjct: 191 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 250
Query: 516 IGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWI 574
+ ++APE IF R + +SDV+S+G+LL E+ S Y I
Sbjct: 251 LKWMAPETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKI 293
Query: 575 YDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
++ + KE D +M L C P RP+ + +VE L +
Sbjct: 294 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 344
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 129/287 (44%), Gaps = 36/287 (12%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY---L 463
+LLG C G +I E+ G+L L R K N + L + L + H I Y +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 464 HNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYI 519
G E + +H D+ +N+LL K+ DFGLA+ ++ V R + ++
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 213
Query: 520 APE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
APE IF R + +SDV+S+G+LL E+ S Y I ++
Sbjct: 214 APETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKIDEEF 256
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
+ KE D +M L C P RP+ + +VE L +
Sbjct: 257 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 303
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ + D + L L + L ++ G+A + H+
Sbjct: 72 DVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 125
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 126 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 181
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTS--NFSDNFINEVATIGRI 401
DIKK+ FKE LGTG + V + G+L AVK + K + + NE+A + +I
Sbjct: 19 DIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 402 HHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIE 461
H NI+ L + L+ + + G L D + EK + K A L V A+
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIV-EKGFYTEKDASTL--IRQVLDAVY 134
Query: 462 YLHNGCELRILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
YLH + I+H D+KP+N+L D + +SDFGL+K + M+ GT GY
Sbjct: 135 YLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGY 188
Query: 519 IAPEIFMRNLGNPSGKS-DVYSYGML 543
+APE+ + P K+ D +S G++
Sbjct: 189 VAPEVLAQ---KPYSKAVDCWSIGVI 211
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKEN---LSLKPARLLEIALGVAHAIEYLHNGC 467
+ L++E++ + L D + L L + L ++ G+A + H+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH- 122
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
R+LH D+KP+N+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 123 --RVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-G 177
Query: 528 LGNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 140/293 (47%), Gaps = 62/293 (21%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
E +G+GG+G V+K K DG+ +K ++ + ++ EV + ++ HVNI+H G C
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER---EVKALAKLDHVNIVHYNG-C 72
Query: 414 CDG-----------STRA------LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGV 456
DG S+R+ + E+ G+L + + + L LE+ +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALELFEQI 131
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKA----HSRNRSVVTMTGP 512
++Y+H+ ++++ D+KP N+ L K+ DFGL + R RS
Sbjct: 132 TKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS------- 181
Query: 513 RGTIGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFP 571
+GT+ Y++PE I ++ G + D+Y+ G++L E++ H+ T + T +F
Sbjct: 182 KGTLRYMSPEQISSQDYGK---EVDLYALGLILAELL----HVCDT-----AFETSKFFT 229
Query: 572 DWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLS 624
D + D +I D ++++ + +K+ + P+DRP+ + ++ L+
Sbjct: 230 D-LRDGIIS----DIFDKKEKTLLQKL-------LSKKPEDRPNTSEILRTLT 270
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 353 FKEKLGTGGYGNVYKGKF------PDGRLVAVKVLEKTSN--FSDNFINEVATIGRIHHV 404
F E+LG +G VYKG + VA+K L+ + + F +E R+ H
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKEN-------------LSLKPARLLE 451
N++ LLG ++I+ Y +G L + L + +L+P +
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 452 IALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTG 511
+ +A +EYL + ++H D+ +NVL+ K+SD GL + +
Sbjct: 133 LVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 512 PRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF- 570
I ++APE M G S SD++SYG++L E+ L+P S + E
Sbjct: 190 SLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEVFSYG--LQPYCGYSNQDVVEMIRN 245
Query: 571 ----------PDWIYDKLIQ 580
P W+Y +I+
Sbjct: 246 RQVLPCPDDCPAWVYALMIE 265
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K VAVK+L+ + D + I+E+ + I H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E LS K L+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK--DLV 142
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
A VA +EYL + + +H D+ +NVL+ D K++DFGLA+ T
Sbjct: 143 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+LL E+ T GS +
Sbjct: 200 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIF----------TLGGSP-----Y 242
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASA 628
P ++L + KE ++ ++ ++ C P RP+ ++VE L A
Sbjct: 243 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 300
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLLSREKEN----LSLKPARLLEIALGVAHAIEY 462
+LLG C G +I E+ G+L L R K N + P L + L + H I Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 463 ---LHNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
+ G E + +H D+ +N+LL K+ DFGLA+ ++ V R
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 516 IGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWI 574
+ ++APE IF R + +SDV+S+G+LL E+ S Y I
Sbjct: 205 LKWMAPETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKI 247
Query: 575 YDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
++ + KE D +M L C P RP+ + +VE L +
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K VAVK+L+ + D + I+E+ + I H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E LS K L+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK--DLV 146
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
A VA +EYL + + +H D+ +NVL+ D K++DFGLA+ T
Sbjct: 147 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+LL E+ T GS +
Sbjct: 204 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIF----------TLGGSP-----Y 246
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASA 628
P ++L + KE ++ ++ ++ C P RP+ ++VE L A
Sbjct: 247 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 304
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 411 GFCCDGSTRALIYEYMPN--GSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 178
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K VAVK+L+ + D + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E LS K L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK--DLV 153
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
A VA +EYL + + +H D+ +NVL+ D K++DFGLA+ T
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+LL E+ T GS +
Sbjct: 211 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIF----------TLGGSP-----Y 253
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASA 628
P ++L + KE ++ ++ ++ C P RP+ ++VE L A
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K VAVK+L+ + D + I+E+ + I H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E LS K L+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK--DLV 145
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
A VA +EYL + + +H D+ +NVL+ D K++DFGLA+ T
Sbjct: 146 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+LL E+ T GS +
Sbjct: 203 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIF----------TLGGSP-----Y 245
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASA 628
P ++L + KE ++ ++ ++ C P RP+ ++VE L A
Sbjct: 246 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 303
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 178
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 123 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 178
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 411 GFCCDGSTRALIYEYMPN--GSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 121
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 177
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 70 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 124 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 179
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 38/290 (13%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 408 HLLGFCCD-GSTRALIYEYMPNGSLGDLL-SREKENLSLK--PARLLEIALGVAHAIEY- 462
+LLG C G +I E+ G+L L S+ E + K P L + L + H I Y
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 463 --LHNGCEL----RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTI 516
+ G E + +H D+ +N+LL K+ DFGLA+ ++ V R +
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 517 GYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIY 575
++APE IF R + +SDV+S+G+LL E+ S Y I
Sbjct: 217 KWMAPETIFDRVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKID 259
Query: 576 DKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
++ + KE D +M L C P RP+ + +VE L +
Sbjct: 260 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 309
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K VAVK+L+ + D + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E LS K L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK--DLV 153
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
A VA +EYL + + +H D+ +NVL+ D K++DFGLA+ T
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+LL E+ T GS +
Sbjct: 211 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIF----------TLGGSP-----Y 253
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASA 628
P ++L + KE ++ ++ ++ C P RP+ ++VE L A
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 121
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 122 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 177
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 71 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 124
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 125 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 180
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 72 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 125
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 126 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 181
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 71 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 124
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 125 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 180
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 73 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 126
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 127 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 182
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 72 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 125
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 126 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 181
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 357 LGTGGYGNVYKGK----FPDGRLVAVKVLEKT---SNFSDNFIN--EVATIGRIHHVNII 407
LG GGYG V++ + G++ A+KVL+K N D E + + H I+
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L+ G LI EY+ G L + E+E + ++ +A ++ A+ +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLA-EISMALGHLHQKG 141
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I++ D+KP+N++L+ K++DFGL K S + VT T GTI Y+APEI MR+
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFC-GTIEYMAPEILMRS 196
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
N + D +S G L+ +M+
Sbjct: 197 GHNRA--VDWWSLGALMYDML 215
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 70 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 124 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 179
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKV--LEKTSN-FSDNFINEVATIGRIHHVNIIHLLG 411
EK+G G YG VYK + G A+K LEK I E++ + + H NI+ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCEL 469
L++E++ + L LL + L A+ LL++ G+A Y H+
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR--- 119
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y AP++ M +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGS-K 176
Query: 530 NPSGKSDVYSYGMLLLEMI 548
S D++S G + EM+
Sbjct: 177 KYSTTIDIWSVGCIFAEMV 195
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 32/238 (13%)
Query: 339 SNYSYNDIKKMTNGFKEKLGTGGYGNVYKGK----FP--DGRLVAVKVLEKTSNFS-DNF 391
S+ + IK+ K +LG G +G V+ + P D LVAVK L++ S + +F
Sbjct: 8 SDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDF 67
Query: 392 INEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSRE---------KENL 442
E + + H +I+ G C +G +++EYM +G L L E++
Sbjct: 68 QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 127
Query: 443 SLKP---ARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK- 498
+ P +LL +A VA + YL L +H D+ +N L+ K+ DFG+++
Sbjct: 128 APGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRD 184
Query: 499 AHSRNRSVVTMTGPRGT--IGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKH 553
+S + V G R I ++ PE I R + +SDV+S+G++L E+ K
Sbjct: 185 IYSTDYYRV---GGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQ 236
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKV--LEKTSN-FSDNFINEVATIGRIHHVNIIHLLG 411
EK+G G YG VYK + G A+K LEK I E++ + + H NI+ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCEL 469
L++E++ + L LL + L A+ LL++ G+A Y H+
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR--- 119
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y AP++ M +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGS-K 176
Query: 530 NPSGKSDVYSYGMLLLEMI 548
S D++S G + EM+
Sbjct: 177 KYSTTIDIWSVGCIFAEMV 195
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 356 KLGTGGYGNVYKGKFP-DGRLVA---VKVLEKTSNFSDNFINEVATIGRIH---HVNIIH 408
++G G YG VYK + P G VA V+V + + EVA + R+ H N++
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 409 LLGFCCDGSTR-----ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
L+ C T L++E++ + L L + L + ++ +++L
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDFL 128
Query: 464 HNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEI 523
H C I+H D+KP+N+L+ T K++DFGLA+ +S ++ + T+ Y APE+
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVV---VTLWYRAPEV 182
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEK 551
+++ + D++S G + EM K
Sbjct: 183 LLQS--TYATPVDMWSVGCIFAEMFRRK 208
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 373 GRLVAVKVLEKTS--NFSDNFINEVATIGRIHHVNIIHLLGFCCDG--STRALIYEYMPN 428
G +VAVK L+ + + E+ + ++H +II G C D ++ L+ EY+P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 429 GSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFT 488
GSL D L R S+ A+LL A + + YLH +H D+ +NVLLD D
Sbjct: 120 GSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRL 172
Query: 489 PKVSDFGLAKA----HSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K+ DFGLAKA H R P + + APE SDV+S+G+ L
Sbjct: 173 VKIGDFGLAKAVPEGHEXYRVREDGDSP---VFWYAPECLKEY--KFYYASDVWSFGVTL 227
Query: 545 LEMI 548
E++
Sbjct: 228 YELL 231
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 48/298 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K VAVK+L+ + D + I+E+ + I H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E LS K L+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK--DLV 194
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
A VA +EYL + +H D+ +NVL+ D K++DFGLA+ T
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+LL E+ T GS +
Sbjct: 252 NGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIF----------TLGGSP-----Y 294
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASA 628
P ++L + KE ++ ++ ++ C P RP+ ++VE L A
Sbjct: 295 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 34/239 (14%)
Query: 339 SNYSYNDIKKMTNGFKEKLGTGGYGNVYKGK----FP--DGRLVAVKVLEKTSNFS-DNF 391
S+ + IK+ K +LG G +G V+ + P D LVAVK L++ S + +F
Sbjct: 2 SDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDF 61
Query: 392 INEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSRE---------KENL 442
E + + H +I+ G C +G +++EYM +G L L E++
Sbjct: 62 QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 121
Query: 443 SLKP---ARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK- 498
+ P +LL +A VA + YL L +H D+ +N L+ K+ DFG+++
Sbjct: 122 APGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRD 178
Query: 499 AHSRNRSVV---TMTGPRGTIGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKH 553
+S + V TM I ++ PE I R + +SDV+S+G++L E+ K
Sbjct: 179 IYSTDYYRVGGRTML----PIRWMPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQ 230
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 355 EKLGTGGYGNVYKG-KFPDGRLVAVK--VLEKTSNFSDNFINEVATIGRIHHVNIIHLLG 411
EKLG G Y VYKG G VA+K L+ I E++ + + H NI+ L
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKEN----LSLKPARLLEIALGVAHAIEYLHNGC 467
+ L++E+M N + SR N L L + + L + + H
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQGLAFCH--- 125
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
E +ILH D+KPQN+L++ K+ DFGLA+A V T + T+ Y AP++ M +
Sbjct: 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG--IPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 528 LGNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G +L EMI K
Sbjct: 184 -RTYSTSIDIWSCGCILAEMITGK 206
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKV--LEKTSN-FSDNFINEVATIGRIHHVNIIHLLG 411
EK+G G YG VYK + G A+K LEK I E++ + + H NI+ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCEL 469
L++E++ + L LL + L A+ LL++ G+A Y H+
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR--- 119
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y AP++ M +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEIVTLWYRAPDVLMGS-K 176
Query: 530 NPSGKSDVYSYGMLLLEMI 548
S D++S G + EM+
Sbjct: 177 KYSTTIDIWSVGCIFAEMV 195
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 356 KLGTGGYGNVYKGKFP-DGRLVA---VKVLEKTSNFSDNFINEVATIGRIH---HVNIIH 408
++G G YG VYK + P G VA V+V + + EVA + R+ H N++
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 409 LLGFCCDGSTR-----ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
L+ C T L++E++ + L L + L + ++ +++L
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDFL 128
Query: 464 HNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEI 523
H C I+H D+KP+N+L+ T K++DFGLA+ +S ++ + T+ Y APE+
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV---VTLWYRAPEV 182
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEK 551
+++ + D++S G + EM K
Sbjct: 183 LLQS--TYATPVDMWSVGCIFAEMFRRK 208
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFP---DGRLVAVKVLEKTSN---FSDNFINEVA 396
Y D K +T KE LG+G +G V KG + + VAVK+L+ +N D + E
Sbjct: 22 YLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 80
Query: 397 TIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGV 456
+ ++ + I+ ++G C + + L+ M LG L ++N +K ++E+ V
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLV---MEMAELGPLNKYLQQNRHVKDKNIIELVHQV 136
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV-TMTGPRGT 515
+ ++YL E +H D+ +NVLL K+SDFGL+KA + + T +
Sbjct: 137 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTT 566
+ + APE N S KSDV+S+G+L+ E + +P GS T
Sbjct: 194 VKWYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFP---DGRLVAVKVLEKTSN---FSDNFINEVA 396
Y D K +T KE LG+G +G V KG + + VAVK+L+ +N D + E
Sbjct: 22 YLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 80
Query: 397 TIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGV 456
+ ++ + I+ ++G C + + L+ M LG L ++N +K ++E+ V
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLV---MEMAELGPLNKYLQQNRHVKDKNIIELVHQV 136
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV-TMTGPRGT 515
+ ++YL E +H D+ +NVLL K+SDFGL+KA + + T +
Sbjct: 137 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTT 566
+ + APE N S KSDV+S+G+L+ E + +P GS T
Sbjct: 194 VKWYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKGSEVT 240
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 45/281 (16%)
Query: 357 LGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNIIHL 409
LG G +G+V +G ++KV KT + F++E A + H N+I L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 410 LGFCCDGSTRAL-----IYEYMPNGSLGDLL--SREKENLSLKPAR-LLEIALGVAHAIE 461
LG C + S++ + I +M G L L SR + P + LL+ + +A +E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 462 YLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKA-----HSRNRSVVTMTGPRGTI 516
YL N LH D+ +N +L D T V+DFGL+K + R + M I
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 517 GYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYD 576
+A ++ + KSDV+++G+ + E+ T G +YD
Sbjct: 219 ESLADRVY-------TSKSDVWAFGVTMWEI-----------ATRGMTPYPGVQNHEMYD 260
Query: 577 KLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMT 617
L+ + +++ +DC+ ++ + C + +P DRP+ +
Sbjct: 261 YLLHGHR---LKQPEDCLD-ELYEIMYSCWRTDPLDRPTFS 297
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 19/201 (9%)
Query: 357 LGTGGYGNVYKGK----FPDGRLVAVKVLEKT---SNFSDNFIN--EVATIGRIHHVNII 407
LG GGYG V++ + G++ A+KVL+K N D E + + H I+
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L+ G LI EY+ G L + E+E + ++ +A ++ A+ +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLA-EISMALGHLHQKG 141
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I++ D+KP+N++L+ K++DFGL K + +V GTI Y+APEI MR+
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC--GTIEYMAPEILMRS 196
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
N + D +S G L+ +M+
Sbjct: 197 GHNRA--VDWWSLGALMYDML 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFP---DGRLVAVKVLEKTSN---FSDNFINEVA 396
Y D K +T KE LG+G +G V KG + + VAVK+L+ +N D + E
Sbjct: 2 YLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 60
Query: 397 TIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGV 456
+ ++ + I+ ++G C + + L+ M LG L ++N +K ++E+ V
Sbjct: 61 VMQQLDNPYIVRMIGIC-EAESWMLV---MEMAELGPLNKYLQQNRHVKDKNIIELVHQV 116
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV-TMTGPRGT 515
+ ++YL E +H D+ +NVLL K+SDFGL+KA + + T +
Sbjct: 117 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTT 566
+ + APE N S KSDV+S+G+L+ E + +P GS T
Sbjct: 174 VKWYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKGSEVT 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 22/199 (11%)
Query: 355 EKLGTGGYGNVY--KGKFPDGRLVAVKVLEK----TSNFSDNFINEVATIGRIHHVNIIH 408
+KLG+G YG V K K G A+K+++K T++ S ++EVA + ++ H NI+
Sbjct: 10 KKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
L F D L+ E G L D + ++ + A +++ L YLH
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLHKH-- 123
Query: 469 LRILHLDIKPQNVLLDP---DFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM 525
I+H D+KP+N+LL+ D K+ DFGL+ AH M GT YIAPE+
Sbjct: 124 -NIVHRDLKPENLLLESKSRDALIKIVDFGLS-AHFEVGG--KMKERLGTAYYIAPEVLR 179
Query: 526 RNLGNPSGKSDVYSYGMLL 544
+ K DV+S G++L
Sbjct: 180 KKYDE---KCDVWSCGVIL 195
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 338 LSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGK----FP--DGRLVAVKVLEKTSNFS-DN 390
S+ + IK+ K +LG G +G V+ + P D LVAVK L++ S + +
Sbjct: 30 FSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD 89
Query: 391 FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSRE---------KEN 441
F E + + H +I+ G C +G +++EYM +G L L E+
Sbjct: 90 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 149
Query: 442 LSLKP---ARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK 498
++ P +LL +A VA + YL L +H D+ +N L+ K+ DFG+++
Sbjct: 150 VAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
Query: 499 -AHSRNRSVV---TMTGPRGTIGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKH 553
+S + V TM I ++ PE I R + +SDV+S+G++L E+ K
Sbjct: 207 DIYSTDYYRVGGRTML----PIRWMPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQ 259
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFP---DGRLVAVKVLEKTSN---FSDNFINEVA 396
Y D K +T KE LG+G +G V KG + + VAVK+L+ +N D + E
Sbjct: 6 YLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 64
Query: 397 TIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGV 456
+ ++ + I+ ++G C + + L+ E G L L ++N +K ++E+ V
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 120
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV-TMTGPRGT 515
+ ++YL E +H D+ +NVLL K+SDFGL+KA + + T +
Sbjct: 121 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTT 566
+ + APE N S KSDV+S+G+L+ E + +P GS T
Sbjct: 178 VKWYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKGSEVT 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFP---DGRLVAVKVLEKTSN---FSDNFINEVA 396
Y D K +T KE LG+G +G V KG + + VAVK+L+ +N D + E
Sbjct: 20 YLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 78
Query: 397 TIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGV 456
+ ++ + I+ ++G C + + L+ E G L L ++N +K ++E+ V
Sbjct: 79 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 134
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV-TMTGPRGT 515
+ ++YL E +H D+ +NVLL K+SDFGL+KA + + T +
Sbjct: 135 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 191
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTT 566
+ + APE N S KSDV+S+G+L+ E + +P GS T
Sbjct: 192 VKWYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKGSEVT 238
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKG-KFPDGRLVAVKVLEKTSNFSDNFI-NEVATIGR 400
+ D+ K+T+ E LG G Y V +G+ AVK++EK + S + + EV T+ +
Sbjct: 10 FEDMYKLTS---ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 401 IH-HVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHA 459
+ NI+ L+ F D + L++E + GS+ + ++K + +R++ VA A
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVR---DVAAA 123
Query: 460 IEYLHNGCELRILHLDIKPQNVLLD--PDFTP-KVSDFGLAKAHSRNRSVVTMTGPR--- 513
+++LH I H D+KP+N+L + +P K+ DF L N S +T P
Sbjct: 124 LDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTT 180
Query: 514 --GTIGYIAP---EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
G+ Y+AP E+F + D++S G++L M+
Sbjct: 181 PCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIML 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFP---DGRLVAVKVLEKTSN---FSDNFINEVA 396
Y D K +T KE LG+G +G V KG + + VAVK+L+ +N D + E
Sbjct: 12 YLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 70
Query: 397 TIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGV 456
+ ++ + I+ ++G C + + L+ E G L L ++N +K ++E+ V
Sbjct: 71 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 126
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV-TMTGPRGT 515
+ ++YL E +H D+ +NVLL K+SDFGL+KA + + T +
Sbjct: 127 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTT 566
+ + APE N S KSDV+S+G+L+ E + +P GS T
Sbjct: 184 VKWYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKGSEVT 230
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 131/295 (44%), Gaps = 49/295 (16%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVL------EKTSNFSDNFINEVATIGRIHHVNIIHL 409
LG G + VYK + + ++VA+K + E + + E+ + + H NII L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKEN-LSLKPARLLEIALGVAHAIEYLHNGCE 468
L S +L++++M DL K+N L L P+ + L +EYLH
Sbjct: 78 LDAFGHKSNISLVFDFMET----DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW- 132
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAH-SRNRSVVTMTGPRGTIGYIAPEIF--- 524
ILH D+KP N+LLD + K++DFGLAK+ S NR+ R Y APE+
Sbjct: 133 --ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR---WYRAPELLFGA 187
Query: 525 -MRNLGNPSGKSDVYSYGMLLLEMI---------EEKKHLRPTETTSGSNTTEAY----- 569
M +G D+++ G +L E++ + L T G+ T E +
Sbjct: 188 RMYGVG-----VDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 242
Query: 570 FPDWIYDKLIQ--PEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEM 622
PD++ K P F DD + +I GL+ NP R + T+ ++M
Sbjct: 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLD---LIQGLFL--FNPCARITATQALKM 292
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFP---DGRLVAVKVLEKTSN---FSDNFINEVA 396
Y D K +T KE LG+G +G V KG + + VAVK+L+ +N D + E
Sbjct: 6 YLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 64
Query: 397 TIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGV 456
+ ++ + I+ ++G C + + L+ M LG L ++N +K ++E+ V
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLV---MEMAELGPLNKYLQQNRHVKDKNIIELVHQV 120
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV-TMTGPRGT 515
+ ++YL E +H D+ +NVLL K+SDFGL+KA + + T +
Sbjct: 121 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTT 566
+ + APE N S KSDV+S+G+L+ E + +P GS T
Sbjct: 178 VKWYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKGSEVT 224
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 75
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + + P ++++++A +A
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IG 517
+ YL+ + +H D+ +N ++ DFT K+ DFG+ + G +G +
Sbjct: 136 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX--XRKGGKGLLPVR 190
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 191 WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 246
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
D+C + ++ + C Q NPK RPS +E++SS E
Sbjct: 247 ------------PDNCPDMLLELMRM-CWQYNPKMRPSF---LEIISSIKEE 282
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 357 LGTGGYGNVYKGKFP----DGRLVAVKVLEKTS---NFSDNFINEVATIGRIHHVNIIHL 409
L T G GN K K GR VA+K+++KT EV + ++H NI+ L
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLL---SREKENLSLKPARLLEIALGVAHAIEYLHNG 466
T LI EY G + D L R KE + R + A++Y H
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR------QIVSAVQYCHQK 130
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM- 525
RI+H D+K +N+LLD D K++DFG + + + T G+ Y APE+F
Sbjct: 131 ---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC---GSPPYAAPELFQG 184
Query: 526 RNLGNPSGKSDVYSYGMLLLEMI 548
+ P + DV+S G++L ++
Sbjct: 185 KKYDGP--EVDVWSLGVILYTLV 205
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 357 LGTGGYGNVYKGKFPDGR----LVAVKVLEK--TSNFSDNFINEVATIGRIHHVNIIHLL 410
LG G +G VY+G + + + VAVK +K T + + F++E + + H +I+ L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + T +I E P G LG L R K SLK L+ +L + A+ YL + +
Sbjct: 80 GIIEEEPT-WIIMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLES---IN 133
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +N+L+ K+ DFGL++ + + + R I +++PE N
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESI--NFRR 190
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLI--QPEKEDFVE 588
+ SDV+ + + + E++ S + +F W+ +K + EK D +
Sbjct: 191 FTTASDVWMFAVCMWEIL--------------SFGKQPFF--WLENKDVIGVLEKGDRLP 234
Query: 589 EEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSA 626
+ D C ++ C +P DRP T +V LS
Sbjct: 235 KPDLCPPVLYTLMTR-CWDYDPSDRPRFTELVCSLSDV 271
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 72 DVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 125
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KPQN+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 126 -RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 181
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLV-AVKVLEKTS---NFSDNFINEVATIGRIHHVNIIHLL 410
+KLG+G YG V + + A+K++ KTS + + + EVA + + H NI+ L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 411 GFCCDGSTRALIYEYMPNGSLGD-LLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
F D L+ E G L D ++ R K N + ++ GV YLH
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVT----YLHKH--- 155
Query: 470 RILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I+H D+KP+N+LL + D K+ DFGL+ + M GT YIAPE+ +
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK---MKERLGTAYYIAPEVLRK 212
Query: 527 NLGNPSGKSDVYSYGMLLL 545
K DV+S G++L
Sbjct: 213 KYDE---KCDVWSIGVILF 228
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 411 GFCCDGSTRALIYEY--MPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E+ M D + L L + L ++ G+A + H+
Sbjct: 70 DVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KP+N+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 124 -RVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 179
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 357 LGTGGYGNVYKGKFPDGR----LVAVKVLEK--TSNFSDNFINEVATIGRIHHVNIIHLL 410
LG G +G VY+G + + + VAVK +K T + + F++E + + H +I+ L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + T +I E P G LG L R K SLK L+ +L + A+ YL + +
Sbjct: 92 GIIEEEPT-WIIMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLES---IN 145
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +N+L+ K+ DFGL++ + + + R I +++PE N
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESI--NFRR 202
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLI--QPEKEDFVE 588
+ SDV+ + + + E++ S + +F W+ +K + EK D +
Sbjct: 203 FTTASDVWMFAVCMWEIL--------------SFGKQPFF--WLENKDVIGVLEKGDRLP 246
Query: 589 EEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSA 626
+ D C ++ C +P DRP T +V LS
Sbjct: 247 KPDLCPPVLYTLMTR-CWDYDPSDRPRFTELVCSLSDV 283
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 357 LGTGGYGNVYKGKFPDGR----LVAVKVLEK--TSNFSDNFINEVATIGRIHHVNIIHLL 410
LG G +G VY+G + + + VAVK +K T + + F++E + + H +I+ L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + T +I E P G LG L R K SLK L+ +L + A+ YL + +
Sbjct: 76 GIIEEEPT-WIIMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLES---IN 129
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +N+L+ K+ DFGL++ + + + R I +++PE N
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESI--NFRR 186
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLI--QPEKEDFVE 588
+ SDV+ + + + E++ S + +F W+ +K + EK D +
Sbjct: 187 FTTASDVWMFAVCMWEIL--------------SFGKQPFF--WLENKDVIGVLEKGDRLP 230
Query: 589 EEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSA 626
+ D C ++ C +P DRP T +V LS
Sbjct: 231 KPDLCPPVLYTLMTR-CWDYDPSDRPRFTELVCSLSDV 267
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 357 LGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V+ + +GR A+KVL+K ++ +E + + H II + G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D +I +Y+ G L LL R+ + A+ A V A+EYLH+ I
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLL-RKSQRFPNPVAKFY--AAEVCLALEYLHSK---DI 127
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-GTIGYIAPEIFMRNLGN 530
++ D+KP+N+LLD + K++DFG AK V +T GT YIAPE+
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKY------VPDVTYXLCGTPDYIAPEVVS---TK 178
Query: 531 PSGKS-DVYSYGMLLLEMI 548
P KS D +S+G+L+ EM+
Sbjct: 179 PYNKSIDWWSFGILIYEML 197
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 25/217 (11%)
Query: 344 NDIKKMTNGFKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSD----NFINEVATI 398
+D +K+ + +E +G G +G VY + + +VA+K + + S+ + I EV +
Sbjct: 11 DDPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIAL---G 455
++ H N I G T L+ EY GS DLL K KP + +EIA G
Sbjct: 70 QKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAVTHG 123
Query: 456 VAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
+ YLH+ ++H D+K N+LL K+ DFG A + V GT
Sbjct: 124 ALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GT 174
Query: 516 IGYIAPEIFMR-NLGNPSGKSDVYSYGMLLLEMIEEK 551
++APE+ + + G GK DV+S G+ +E+ E K
Sbjct: 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 411 GFCCDGSTRALIYEY--MPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E+ M D + L L + L ++ G+A + H+
Sbjct: 72 DVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 125
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KP+N+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 126 -RVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 181
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 355 EKLGTGGYGNVYKGKFP---DGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIH 408
++LG+G +G V KG + + VAVK+L+ +N D + E + ++ + I+
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
++G C + + L+ E G L L ++N +K ++E+ V+ ++YL E
Sbjct: 71 MIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE---E 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV-TMTGPRGTIGYIAPEIFMRN 527
+H D+ +NVLL K+SDFGL+KA + + T + + + APE N
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 181
Query: 528 LGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTT 566
S KSDV+S+G+L+ E + +P GS T
Sbjct: 182 YYKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKGSEVT 218
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 70 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 123
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KP+N+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 124 -RVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 179
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 139/302 (46%), Gaps = 67/302 (22%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
E +G+GG+G V+K K DG+ ++ ++ + ++ EV + ++ HVNI+H G C
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER---EVKALAKLDHVNIVHYNG-C 73
Query: 414 CDG------------------------STRA------LIYEYMPNGSLGDLLSREKENLS 443
DG S+R+ + E+ G+L + + +
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-K 132
Query: 444 LKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRN 503
L LE+ + ++Y+H+ +++H D+KP N+ L K+ DFGL + +
Sbjct: 133 LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 504 RSVVTMTGPRGTIGYIAPE-IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSG 562
T +GT+ Y++PE I ++ G + D+Y+ G++L E++ H+ T
Sbjct: 190 GK---RTRSKGTLRYMSPEQISSQDYGK---EVDLYALGLILAELL----HVCDT----- 234
Query: 563 SNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEM 622
+ T +F D + D +I D ++++ + +K+ + P+DRP+ + ++
Sbjct: 235 AFETSKFFTD-LRDGIIS----DIFDKKEKTLLQKL-------LSKKPEDRPNTSEILRT 282
Query: 623 LS 624
L+
Sbjct: 283 LT 284
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 25/217 (11%)
Query: 344 NDIKKMTNGFKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSD----NFINEVATI 398
+D +K+ + +E +G G +G VY + + +VA+K + + S+ + I EV +
Sbjct: 50 DDPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 108
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIAL---G 455
++ H N I G T L+ EY GS DLL K KP + +EIA G
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK-----KPLQEVEIAAVTHG 162
Query: 456 VAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT 515
+ YLH+ ++H D+K N+LL K+ DFG A + V GT
Sbjct: 163 ALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GT 213
Query: 516 IGYIAPEIFMR-NLGNPSGKSDVYSYGMLLLEMIEEK 551
++APE+ + + G GK DV+S G+ +E+ E K
Sbjct: 214 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 356 KLGTGGYGNVYKGKFP-DGRLVA---VKVLEKTSNFSDNFINEVATIGRIH---HVNIIH 408
++G G YG VYK + P G VA V+V + + EVA + R+ H N++
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 409 LLGFCCDGSTR-----ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
L+ C T L++E++ + L L + L + ++ +++L
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDFL 128
Query: 464 HNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEI 523
H C I+H D+KP+N+L+ T K++DFGLA+ +S ++ + T+ Y APE+
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV---VTLWYRAPEV 182
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEK 551
+++ + D++S G + EM K
Sbjct: 183 LLQS--TYATPVDMWSVGCIFAEMFRRK 208
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG VYK + G +VA+K + +T I E++ + ++H NI+ LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 411 GFCCDGSTRALIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
+ L++E++ D + L L + L ++ G+A + H+
Sbjct: 71 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA----FCHSH-- 124
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
R+LH D+KP+N+L++ + K++DFGLA+A V T T+ Y APEI +
Sbjct: 125 -RVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL-GC 180
Query: 529 GNPSGKSDVYSYGMLLLEMIEEK 551
S D++S G + EM+ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 130/285 (45%), Gaps = 39/285 (13%)
Query: 356 KLGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNII 407
+LG G +G VY+G D VAVK + ++++ + F+NE + + +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR-------LLEIALGVAHAI 460
LLG G ++ E M +G L L + P R ++++A +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 461 EYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IGY 518
YL+ + +H ++ +N ++ DFT K+ DFG+ + + G +G + +
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 198
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
+APE + S SD++S+G++L E+ + +P + S + ++ D
Sbjct: 199 MAPESLKDGVFTTS--SDMWSFGVVLWEITSLAE--QPYQGLSNEQVLK-----FVMDG- 248
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
++++ D+C R ++ + C Q NP RP+ +V +L
Sbjct: 249 ------GYLDQPDNCPERVTDLMRM-CWQFNPNMRPTFLEIVNLL 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 130/285 (45%), Gaps = 39/285 (13%)
Query: 356 KLGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNII 407
+LG G +G VY+G D VAVK + ++++ + F+NE + + +++
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR-------LLEIALGVAHAI 460
LLG G ++ E M +G L L + P R ++++A +A +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 461 EYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IGY 518
YL+ + +H ++ +N ++ DFT K+ DFG+ + + G +G + +
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 199
Query: 519 IAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
+APE + S SD++S+G++L E+ + +P + S + ++ D
Sbjct: 200 MAPESLKDGVFTTS--SDMWSFGVVLWEITSLAE--QPYQGLSNEQVLK-----FVMDG- 249
Query: 579 IQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
++++ D+C R ++ + C Q NP RP+ +V +L
Sbjct: 250 ------GYLDQPDNCPERVTDLMRM-CWQFNPNMRPTFLEIVNLL 287
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 357 LGTGGYGNVY--KGKFPDGRLVAVKVLEK----TSNFSDNFINEVATIGRIHHVNIIHLL 410
LG G +G V K K G+ AVKV+ K ++ + EV + ++ H NI+ L
Sbjct: 34 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
F D L+ E G L D + K + AR++ L I Y+H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKN---K 146
Query: 471 ILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D ++ DFGL+ ++ M GT YIAPE+
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLH-- 201
Query: 528 LGNPSGKSDVYSYGMLL 544
G K DV+S G++L
Sbjct: 202 -GTYDEKCDVWSTGVIL 217
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 44/292 (15%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + + P ++++++A +A
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IG 517
+ YL+ + +H D+ +N ++ DFT K+ DFG+ + G +G +
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX--XRKGGKGLLPVR 199
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 200 WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 255
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
D+C ++ + C Q NPK RPS +E++SS E
Sbjct: 256 ------------PDNCPDMLFELMRM-CWQYNPKMRPSF---LEIISSIKEE 291
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 24/210 (11%)
Query: 356 KLGTGGYGNVYKGKFPD-GRLVAVKVLE-KTSNFSDNFINEVATIGRIHHVNIIHLLG-F 412
+LG G +G VYK K + G L A KV+E K+ +++I E+ + H I+ LLG +
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
DG +I E+ P G++ ++ L+ ++ + + A+ +LH+ RI+
Sbjct: 86 YHDGKLWIMI-EFCPGGAVDAIMLELDRGLT--EPQIQVVCRQMLEALNFLHSK---RII 139
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLA----KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
H D+K NVL+ + +++DFG++ K + S + GT ++APE+ M
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCET 193
Query: 529 GNPSG---KSDVYSYGMLLLEM--IEEKKH 553
+ K+D++S G+ L+EM IE H
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEPPHH 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 357 LGTGGYGNVYKGKFPDGR-LVAVKVLEKTS----NFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + +VA+KVL K+ E+ +HH NI+ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ D LI EY P G L L + + + R I +A A+ Y H ++
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQK---SCTFDEQRTATIMEELADALMYCHGK---KV 144
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H DIKP+N+LL K++DFG + H+ + TM GT+ Y+ PE+ + N
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTMC---GTLDYLPPEMIEGRMHN- 199
Query: 532 SGKSDVYSYGMLLLEMI 548
K D++ G+L E++
Sbjct: 200 -EKVDLWCIGVLCYELL 215
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 128/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
IIHLLG C +I EY G+L + L + E ++ K L+
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK--DLV 160
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + K++DFGLA+ + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 260
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 357 LGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
LG G +G V K + D R A+K + T ++EV + ++H ++ +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 416 -------------GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
ST + EY N +L DL+ ENL+ + + + A+ Y
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI--HSENLNQQRDEYWRLFRQILEALSY 131
Query: 463 LHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV------------TMT 510
+H+ I+H ++KP N+ +D K+ DFGLAK R+ ++ +T
Sbjct: 132 IHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
GT Y+A E+ + G+ + K D YS G++ E I
Sbjct: 189 SAIGTAXYVATEV-LDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 22/199 (11%)
Query: 355 EKLGTGGYGNVY--KGKFPDGRLVAVKVLEK----TSNFSDNFINEVATIGRIHHVNIIH 408
+KLG+G YG V K K G A+K+++K T++ S ++EVA + ++ H NI+
Sbjct: 27 KKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
L F D L+ E G L D + ++ + A +++ L YLH
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLHKH-- 140
Query: 469 LRILHLDIKPQNVLLDP---DFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM 525
I+H D+KP+N+LL+ D K+ DFGL+ AH M GT YIAPE+
Sbjct: 141 -NIVHRDLKPENLLLESKSRDALIKIVDFGLS-AHFEVGG--KMKERLGTAYYIAPEVLR 196
Query: 526 RNLGNPSGKSDVYSYGMLL 544
+ K DV+S G++L
Sbjct: 197 KKYDE---KCDVWSCGVIL 212
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 24/210 (11%)
Query: 356 KLGTGGYGNVYKGKFPD-GRLVAVKVLE-KTSNFSDNFINEVATIGRIHHVNIIHLLG-F 412
+LG G +G VYK K + G L A KV+E K+ +++I E+ + H I+ LLG +
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
DG +I E+ P G++ ++ L+ ++ + + A+ +LH+ RI+
Sbjct: 78 YHDGKLWIMI-EFCPGGAVDAIMLELDRGLT--EPQIQVVCRQMLEALNFLHSK---RII 131
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLA----KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
H D+K NVL+ + +++DFG++ K + S + GT ++APE+ M
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCET 185
Query: 529 GNPSG---KSDVYSYGMLLLEM--IEEKKH 553
+ K+D++S G+ L+EM IE H
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEPPHH 215
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 136/289 (47%), Gaps = 55/289 (19%)
Query: 354 KEKLGTGGYGN-VYKGKFPDGRLVAVK-VLEKTSNFSDNFINEVATIGRIHHVNIIHLLG 411
K+ LG G G VY+G F D R VAVK +L + +F+D + + H N+I
Sbjct: 29 KDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESDE--HPNVIRY-- 83
Query: 412 FCCDGSTRALIYEYMP----NGSLGDLLSREK-ENLSLKPARLLE-IALGVAHAIEYLHN 465
FC + + ++Y+ +L + + ++ +L L+P LL+ G+AH LH+
Sbjct: 84 FCTEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAH----LHS 136
Query: 466 GCELRILHLDIKPQNVLLD-PDFTPK----VSDFGLAKAHSRNR-SVVTMTGPRGTIGYI 519
L I+H D+KP N+L+ P+ K +SDFGL K + R S +G GT G+I
Sbjct: 137 ---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 520 APEIFMRNLG-NPSGKSDVYSYGMLLLEMIEEKKH------LRPTETTSGSNTTEAYFPD 572
APE+ + NP+ D++S G + +I E H R G+ + + P
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHP- 252
Query: 573 WIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
E+ +D IAR++I I ++P+ RPS V++
Sbjct: 253 ---------------EKHEDVIARELIEK---MIAMDPQKRPSAKHVLK 283
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 373 GRLVAVKVLEKT--SNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRAL--IYEYMPN 428
G +VAVK L+ + E+ + ++H +II G C D ++L + EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 429 GSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFT 488
GSL D L R S+ A+LL A + + YLH+ +H ++ +NVLLD D
Sbjct: 103 GSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRL 155
Query: 489 PKVSDFGLAKA----HSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K+ DFGLAKA H R P + + APE SDV+S+G+ L
Sbjct: 156 VKIGDFGLAKAVPEGHEYYRVREDGDSP---VFWYAPECLKEY--KFYYASDVWSFGVTL 210
Query: 545 LEMI 548
E++
Sbjct: 211 YELL 214
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 356 KLGTGGYGNVYKGKFPDGRL---VAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIHLL 410
+LG G +G+V +G + + VA+KVL++ + +D + E + ++ + I+ L+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G C L+ E G L L ++E + + + + E+ V+ ++YL E
Sbjct: 77 G-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLE---EKN 130
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTM-TGPRGTIGYIAPEIFMRNLG 529
+H D+ +NVLL K+SDFGL+KA + S T + + + + APE N
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI--NFR 188
Query: 530 NPSGKSDVYSYGMLLLEMI 548
S +SDV+SYG+ + E +
Sbjct: 189 KFSSRSDVWSYGVTMWEAL 207
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 126/312 (40%), Gaps = 44/312 (14%)
Query: 336 ALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGK------FPDGRLVAVKVL-EKTSNFS 388
A+ S IK+ K +LG G +G V+ + D LVAVK L + T
Sbjct: 2 AMHSGIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR 61
Query: 389 DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLL------------- 435
+F E + + H +I+ G C DG +++EYM +G L L
Sbjct: 62 KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG 121
Query: 436 --SREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSD 493
+ K L L +++L IA +A + YL +H D+ +N L+ + K+ D
Sbjct: 122 QPRQAKGELGL--SQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGD 176
Query: 494 FGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKH 553
FG+++ I ++ PE M + +SDV+S+G++L E+ K
Sbjct: 177 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR--KFTTESDVWSFGVILWEIFTYGK- 233
Query: 554 LRPTETTSGSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDR 613
+P S + E + V E +++ V L C Q P+ R
Sbjct: 234 -QPWFQLSNTEVIECI-------------TQGRVLERPRVCPKEVYDVMLGCWQREPQQR 279
Query: 614 PSMTRVVEMLSS 625
++ + ++L +
Sbjct: 280 LNIKEIYKILHA 291
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 357 LGTGGYGNVY--KGKFPDGRLVAVKVLEK----TSNFSDNFINEVATIGRIHHVNIIHLL 410
LG G +G V K K G+ AVKV+ K ++ + EV + ++ H NI+ L
Sbjct: 57 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
F D L+ E G L D + K + AR++ L I Y+H +
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKN---K 169
Query: 471 ILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D ++ DFGL+ ++ M GT YIAPE+
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLH-- 224
Query: 528 LGNPSGKSDVYSYGMLL 544
G K DV+S G++L
Sbjct: 225 -GTYDEKCDVWSTGVIL 240
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL----VAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIH 408
+ LG G G V + R+ VAVK+ +++ + +N E+ ++H N++
Sbjct: 12 QTLGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 409 LLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
G +G+ + L EY S G+L R + ++ + + + YLH
Sbjct: 69 FYGHRREGNIQYLFLEYC---SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ I H DIKP+N+LLD K+SDFGLA N + GT+ Y+APE+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G++L M+
Sbjct: 183 FH-AEPVDVWSCGIVLTAML 201
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 357 LGTGGYGNVY--KGKFPDGRLVAVKVLEK----TSNFSDNFINEVATIGRIHHVNIIHLL 410
LG G +G V K K G+ AVKV+ K ++ + EV + ++ H NI+ L
Sbjct: 40 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
F D L+ E G L D + K + AR++ L I Y+H +
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKN---K 152
Query: 471 ILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D ++ DFGL+ ++ M GT YIAPE+
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLH-- 207
Query: 528 LGNPSGKSDVYSYGMLL 544
G K DV+S G++L
Sbjct: 208 -GTYDEKCDVWSTGVIL 223
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 112/238 (47%), Gaps = 29/238 (12%)
Query: 353 FKEKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRI-----HHVNI 406
F LG G +G V + + G L AVKVL+K D+ + T RI +H +
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 407 IHLLGFCCDGSTRALIY--EYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
L FCC + L + E++ NG GDL+ +++ AR A + A+ +LH
Sbjct: 87 TQL--FCCFQTPDRLFFVMEFV-NG--GDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ I++ D+K NVLLD + K++DFG+ K N VT GT YIAPEI
Sbjct: 142 DKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG--VTTATFCGTPDYIAPEIL 196
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEA------YFPDWIYD 576
L P+ D ++ G+LL EM+ P E + + EA +P W+++
Sbjct: 197 QEMLYGPA--VDWWAMGVLLYEMLCGHA---PFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 331 KTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLVAVKVLE-KTSNFS 388
+ +R+AL D + + F K+G G G V G+LVAVK ++ +
Sbjct: 134 EQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR 192
Query: 389 DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR 448
+ NEV + H N++ + G ++ E++ G+L D+++ + N +
Sbjct: 193 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----Q 248
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFG----LAKAHSRNR 504
+ + L V A+ LH ++H DIK ++LL D K+SDFG ++K R +
Sbjct: 249 IAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305
Query: 505 SVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+V GT ++APE+ R P + D++S G++++EM++
Sbjct: 306 XLV------GTPYWMAPELISRLPYGP--EVDIWSLGIMVIEMVD 342
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHL-LGFCC 414
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 415 DGSTRALIY-----EYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
G + ++Y +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 85 SGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 140
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIF- 195
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 331 KTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLVAVKVLE-KTSNFS 388
+ +R+AL D + + F K+G G G V G+LVAVK ++ +
Sbjct: 12 EQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR 70
Query: 389 DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR 448
+ NEV + H N++ + G ++ E++ G+L D+++ + N +
Sbjct: 71 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN----EEQ 126
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFG----LAKAHSRNR 504
+ + L V A+ LH ++H DIK ++LL D K+SDFG ++K R +
Sbjct: 127 IAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 183
Query: 505 SVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+V GT ++APE+ R P + D++S G++++EM++
Sbjct: 184 XLV------GTPYWMAPELISRLPYGP--EVDIWSLGIMVIEMVD 220
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 356 KLGTGGYGNVYKGKFP-DGRLVAVKVLE------KTSNFSDNFINEVATIGRIH---HVN 405
++G G YG VYK + P G VA+K + + + EVA + R+ H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 406 IIHLLGFCCDGSTR-----ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAI 460
++ L+ C T L++E++ + L L + L + ++ +
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPP-GLPAETIKDLMRQFLRGL 133
Query: 461 EYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIA 520
++LH C I+H D+KP+N+L+ T K++DFGLA+ +S ++ + T+ Y A
Sbjct: 134 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV---VTLWYRA 187
Query: 521 PEIFMRNLGNPSGKSDVYSYGMLLLEMIEEK 551
PE+ +++ + D++S G + EM K
Sbjct: 188 PEVLLQS--TYATPVDMWSVGCIFAEMFRRK 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 373 GRLVAVKVLEKT--SNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRAL--IYEYMPN 428
G +VAVK L+ + E+ + ++H +II G C D ++L + EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 429 GSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFT 488
GSL D L R S+ A+LL A + + YLH +H ++ +NVLLD D
Sbjct: 103 GSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRL 155
Query: 489 PKVSDFGLAKA----HSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K+ DFGLAKA H R P + + APE SDV+S+G+ L
Sbjct: 156 VKIGDFGLAKAVPEGHEYYRVREDGDSP---VFWYAPECLKEY--KFYYASDVWSFGVTL 210
Query: 545 LEMI 548
E++
Sbjct: 211 YELL 214
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 81
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + + P ++++++A +A
Sbjct: 82 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IG 517
+ YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G +
Sbjct: 142 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 196
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 197 WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 252
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
D+C ++ + C Q NPK RPS +E++SS E
Sbjct: 253 ------------PDNCPDMLFELMRM-CWQYNPKMRPSF---LEIISSIKEE 288
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 357 LGTGGYGNVY--KGKFPDGRLVAVKVLEK----TSNFSDNFINEVATIGRIHHVNIIHLL 410
LG G +G V K K G+ AVKV+ K ++ + EV + ++ H NI+ L
Sbjct: 58 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
F D L+ E G L D + K + AR++ L I Y+H +
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKN---K 170
Query: 471 ILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D ++ DFGL+ ++ M GT YIAPE+
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLH-- 225
Query: 528 LGNPSGKSDVYSYGMLL 544
G K DV+S G++L
Sbjct: 226 -GTYDEKCDVWSTGVIL 241
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 118
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 119 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 174
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 175 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIF- 229
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 230 GATDYTSSIDVWSAGCVLAELL 251
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 357 LGTGGYGNVYKGKFP----DGRLVAVKVLEKT---SNFSDNFINEVATIGRIHHVNIIHL 409
L T G GN K K G+ VAVK+++KT S+ EV + ++H NI+ L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLL---SREKENLSLKPARLLEIALGVAHAIEYLHNG 466
T L+ EY G + D L R KE + R + A++Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIVSAVQYCHQK 132
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM- 525
I+H D+K +N+LLD D K++DFG + + + T G+ Y APE+F
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQG 186
Query: 526 RNLGNPSGKSDVYSYGMLLLEMI 548
+ P + DV+S G++L ++
Sbjct: 187 KKYDGP--EVDVWSLGVILYTLV 207
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + + P ++++++A +A
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IG 517
+ YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G +
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 199
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 200 WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 255
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
D+C ++ + C Q NPK RPS +E++SS E
Sbjct: 256 ------------PDNCPDMLFELMRM-CWQYNPKMRPSF---LEIISSIKEE 291
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFP---DGRLVAVKVLEKTSN---FSDNFINEVA 396
Y D K +T KE LG+G +G V KG + + VAVK+L+ +N D + E
Sbjct: 364 YLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 422
Query: 397 TIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGV 456
+ ++ + I+ ++G C + + L+ E G L L ++N +K ++E+ V
Sbjct: 423 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 478
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV-TMTGPRGT 515
+ ++YL E +H D+ +NVLL K+SDFGL+KA + + T +
Sbjct: 479 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTT 566
+ + APE N S KSDV+S+G+L+ E + +P GS T
Sbjct: 536 VKWYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKGSEVT 582
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 331 KTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLVAVKVLE-KTSNFS 388
+ +R+AL D + + F K+G G G V G+LVAVK ++ +
Sbjct: 14 EQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR 72
Query: 389 DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR 448
+ NEV + H N++ + G ++ E++ G+L D+++ + N +
Sbjct: 73 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN----EEQ 128
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFG----LAKAHSRNR 504
+ + L V A+ LH ++H DIK ++LL D K+SDFG ++K R +
Sbjct: 129 IAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 185
Query: 505 SVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+V GT ++APE+ R P + D++S G++++EM++
Sbjct: 186 XLV------GTPYWMAPELISRLPYGP--EVDIWSLGIMVIEMVD 222
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 118
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 119 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 174
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 175 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIF- 229
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 230 GATDYTSSIDVWSAGCVLAELL 251
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 112
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 113 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 168
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 169 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIF- 223
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 224 GATDYTSSIDVWSAGCVLAELL 245
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 357 LGTGGYGNVYKGKFP----DGRLVAVKVLEKT---SNFSDNFINEVATIGRIHHVNIIHL 409
L T G GN K K G+ VAVK+++KT S+ EV + ++H NI+ L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLL---SREKENLSLKPARLLEIALGVAHAIEYLHNG 466
T L+ EY G + D L R KE + R + A++Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIVSAVQYCHQK 132
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM- 525
I+H D+K +N+LLD D K++DFG + + + T G+ Y APE+F
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQG 186
Query: 526 RNLGNPSGKSDVYSYGMLLLEMI 548
+ P + DV+S G++L ++
Sbjct: 187 KKYDGP--EVDVWSLGVILYTLV 207
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 44/292 (15%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 80
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + ++ P ++++++A +A
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IG 517
+ YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G +
Sbjct: 141 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 195
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 196 WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 251
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
D+C ++ + C Q NPK RPS +E++SS E
Sbjct: 252 ------------PDNCPDMLFELMRM-CWQYNPKMRPSF---LEIISSIKEE 287
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 120
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 121 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 176
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 177 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIF- 231
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 232 GATDYTSSIDVWSAGCVLAELL 253
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 353 FKEKLGTGGYGNVYKGKFPD-GRLVAVKVL--EKTSNFSDNFINEVATIGRIHHVNIIHL 409
KE+LGTGG+G V + D G VA+K E + + + E+ + +++H N++
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 410 ------LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
L L EY G L L++ + LK + + ++ A+ YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 464 HNGCELRILHLDIKPQNVLLDP---DFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIA 520
H E RI+H D+KP+N++L P K+ D G AK + GT+ Y+A
Sbjct: 138 H---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLA 191
Query: 521 PEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
PE+ + + D +S+G L E I
Sbjct: 192 PELLEQK--KYTVTVDYWSFGTLAFECI 217
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 331 KTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLVAVKVLE-KTSNFS 388
+ +R+AL D + + F K+G G G V G+LVAVK ++ +
Sbjct: 3 EQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR 61
Query: 389 DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR 448
+ NEV + H N++ + G ++ E++ G+L D+++ + N +
Sbjct: 62 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN----EEQ 117
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFG----LAKAHSRNR 504
+ + L V A+ LH ++H DIK ++LL D K+SDFG ++K R +
Sbjct: 118 IAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174
Query: 505 SVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+V GT ++APE+ R P + D++S G++++EM++
Sbjct: 175 XLV------GTPYWMAPELISRLPYGP--EVDIWSLGIMVIEMVD 211
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 96
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 97 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 152
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 153 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIF- 207
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 208 GATDYTSSIDVWSAGCVLAELL 229
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 331 KTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLVAVKVLE-KTSNFS 388
+ +R+AL D + + F K+G G G V G+LVAVK ++ +
Sbjct: 7 EQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR 65
Query: 389 DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR 448
+ NEV + H N++ + G ++ E++ G+L D+++ + N +
Sbjct: 66 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN----EEQ 121
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFG----LAKAHSRNR 504
+ + L V A+ LH ++H DIK ++LL D K+SDFG ++K R +
Sbjct: 122 IAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 178
Query: 505 SVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+V GT ++APE+ R P + D++S G++++EM++
Sbjct: 179 XLV------GTPYWMAPELISRLPYGP--EVDIWSLGIMVIEMVD 215
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 122
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 123 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 178
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 179 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIF- 233
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 234 GATDYTSSIDVWSAGCVLAELL 255
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 343 YNDIKKMTNGFKEKLGTGGYGNVYKGKFP---DGRLVAVKVLEKTSN---FSDNFINEVA 396
Y D K +T KE LG+G +G V KG + + VAVK+L+ +N D + E
Sbjct: 365 YLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 423
Query: 397 TIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGV 456
+ ++ + I+ ++G C + + L+ E G L L ++N +K ++E+ V
Sbjct: 424 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 479
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV-TMTGPRGT 515
+ ++YL E +H D+ +NVLL K+SDFGL+KA + + T +
Sbjct: 480 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 516 IGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTT 566
+ + APE N S KSDV+S+G+L+ E + +P GS T
Sbjct: 537 VKWYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKGSEVT 583
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + + P ++++++A +A
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IG 517
+ YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G +
Sbjct: 138 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 192
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 193 WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 248
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
D+C ++ + C Q NPK RPS +E++SS E
Sbjct: 249 ------------PDNCPDMLFELMRM-CWQYNPKMRPSF---LEIISSIKEE 284
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 41/283 (14%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + ++ P ++++++A +A
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IG 517
+ YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G +
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 205
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 206 WMSPESLKD--GVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 261
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVV 620
D+C ++ + C Q NPK RPS ++
Sbjct: 262 ------------PDNCPDMLFELMRM-CWQYNPKMRPSFLEII 291
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 103
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 104 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 159
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 160 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIF- 214
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 215 GATDYTSSIDVWSAGCVLAELL 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 92
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 93 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 148
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 149 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIF- 203
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 204 GATDYTSSIDVWSAGCVLAELL 225
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 353 FKEKLGTGGYGNVYKGKFPD-GRLVAVKVL--EKTSNFSDNFINEVATIGRIHHVNIIHL 409
KE+LGTGG+G V + D G VA+K E + + + E+ + +++H N++
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 410 ------LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
L L EY G L L++ + LK + + ++ A+ YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 464 HNGCELRILHLDIKPQNVLLDP---DFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIA 520
H E RI+H D+KP+N++L P K+ D G AK + GT+ Y+A
Sbjct: 139 H---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLA 192
Query: 521 PEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
PE+ + + D +S+G L E I
Sbjct: 193 PELLEQK--KYTVTVDYWSFGTLAFECI 218
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 41/283 (14%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + + P ++++++A +A
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG--TIG 517
+ YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G +
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 205
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 206 WMSPESLKD--GVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 261
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVV 620
D+C ++ + C Q NPK RPS ++
Sbjct: 262 ------------PDNCPDMLFELMRM-CWQYNPKMRPSFLEII 291
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 22/219 (10%)
Query: 346 IKKMTNGFKEKLGTGGYGNVYKGKF------PDGRLVAVKVLEKTS-NFSDNFINEVATI 398
IK+ K +LG G +G V+ + D LVAVK L+ S N +F E +
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENL----------SLKPAR 448
+ H +I+ G C +G +++EYM +G L L + L ++
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVT 508
+L IA +A + YL +H D+ +N L+ + K+ DFG+++
Sbjct: 130 MLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 509 MTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEM 547
I ++ PE M + +SDV+S G++L E+
Sbjct: 187 GGHTMLPIRWMPPESIMYR--KFTTESDVWSLGVVLWEI 223
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + + P ++++++A +A
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IG 517
+ YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G +
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 198
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 199 WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 254
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
D+C ++ + C Q NPK RPS +E++SS E
Sbjct: 255 ------------PDNCPDMLFELMRM-CWQYNPKMRPSF---LEIISSIKEE 290
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 96
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 97 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 152
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 153 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIF- 207
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 208 GATDYTSSIDVWSAGCVLAELL 229
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 140
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIF- 195
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 140
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIF- 195
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 112
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + + P ++++++A +A
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IG 517
+ YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G +
Sbjct: 173 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 227
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 228 WMSPESLKD--GVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 283
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
D+C ++ + C Q NPK RPS +E++SS E
Sbjct: 284 ------------PDNCPDMLFELMRM-CWQYNPKMRPSF---LEIISSIKEE 319
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + + P ++++++A +A
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IG 517
+ YL+ + +H D+ +N ++ DFT K+ DFG+ + + G +G +
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 198
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 199 WMSPESLKD--GVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 254
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
D+C ++ + C Q NPK RPS +E++SS E
Sbjct: 255 ------------PDNCPDMLFELMRM-CWQYNPKMRPSF---LEIISSIKEE 290
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 140
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIF- 195
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 97
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 98 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 153
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 154 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIF- 208
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 209 GATDYTSSIDVWSAGCVLAELL 230
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 357 LGTGGYGNVYKGKFP----DGRLVAVKVLEKTS---NFSDNFINEVATIGRIHHVNIIHL 409
L T G GN K K GR VA+K+++KT EV + ++H NI+ L
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLL---SREKENLSLKPARLLEIALGVAHAIEYLHNG 466
T LI EY G + D L R KE + R + A++Y H
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR------QIVSAVQYCHQK 133
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM- 525
RI+H D+K +N+LLD D K++DFG + + + G Y APE+F
Sbjct: 134 ---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC---GAPPYAAPELFQG 187
Query: 526 RNLGNPSGKSDVYSYGMLLLEMI 548
+ P + DV+S G++L ++
Sbjct: 188 KKYDGP--EVDVWSLGVILYTLV 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 357 LGTGGYGNVYKGKFP-----DGRLVAVKVLEKTS--NFSDNFINEVATIGRIHHVNIIHL 409
LG G +G V + G +VAVK L++ + E+ + ++H +I+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 410 LGFCCDGSTRA--LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
G C D ++ L+ EY+P GSL D L R L A+LL A + + YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL----AQLLLFAQQICEGMAYLHAQ- 131
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKA----HSRNRSVVTMTGPRGTIGYIAPEI 523
+H + +NVLLD D K+ DFGLAKA H R P + + APE
Sbjct: 132 --HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP---VFWYAPEC 186
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
SDV+S+G+ L E++
Sbjct: 187 LKEC--KFYYASDVWSFGVTLYELL 209
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 85
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 86 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 141
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 142 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIF- 196
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 197 GATDYTSSIDVWSAGCVLAELL 218
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 357 LGTGGYGNVYKGKFP-----DGRLVAVKVLEKTS--NFSDNFINEVATIGRIHHVNIIHL 409
LG G +G V + G +VAVK L++ + E+ + ++H +I+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 410 LGFCCDGSTRA--LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
G C D ++ L+ EY+P GSL D L R L A+LL A + + YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL----AQLLLFAQQICEGMAYLHAQ- 130
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKA----HSRNRSVVTMTGPRGTIGYIAPEI 523
+H + +NVLLD D K+ DFGLAKA H R P + + APE
Sbjct: 131 --HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP---VFWYAPEC 185
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
SDV+S+G+ L E++
Sbjct: 186 LKEC--KFYYASDVWSFGVTLYELL 208
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 331 KTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF-PDGRLVAVKVLE-KTSNFS 388
+ +R+AL D + + F K+G G G V G+LVAVK ++ +
Sbjct: 57 EQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR 115
Query: 389 DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR 448
+ NEV + H N++ + G ++ E++ G+L D+++ + N +
Sbjct: 116 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----Q 171
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFG----LAKAHSRNR 504
+ + L V A+ LH ++H DIK ++LL D K+SDFG ++K R +
Sbjct: 172 IAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228
Query: 505 SVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+V GT ++APE+ R P + D++S G++++EM++
Sbjct: 229 XLV------GTPYWMAPELISRLPYGP--EVDIWSLGIMVIEMVD 265
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 163
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 164 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 219
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 220 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIF- 274
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 275 GATDYTSSIDVWSAGCVLAELL 296
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 89
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 90 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 145
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 146 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIF- 200
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 201 GATDYTSSIDVWSAGCVLAELL 222
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 88
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 89 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 144
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 145 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIF- 199
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 200 GATDYTSSIDVWSAGCVLAELL 221
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 356 KLGTGGYGNVYKG-------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNI 406
+LG G +G VY+G P+ R VA+K + + ++ + F+NE + + + ++
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-------ARLLEIALGVAHA 459
+ LLG G +I E M G L L + + P ++++++A +A
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGT--IG 517
+ YL+ + +H D+ +N + DFT K+ DFG+ + + G +G +
Sbjct: 138 MAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVR 192
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+++PE G + SDV+S+G++L E+ + P + S + DK
Sbjct: 193 WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLLDK 248
Query: 578 LIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASAE 629
D+C + ++ + C Q NPK RPS +E++SS E
Sbjct: 249 ------------PDNCPDMLLELMRM-CWQYNPKMRPSF---LEIISSIKEE 284
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 137/310 (44%), Gaps = 35/310 (11%)
Query: 334 RSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGK-FPDGRLVAVKVLE----KTSNFS 388
+ AL + YN + ++K+G G + VY+ DG VA+K ++ +
Sbjct: 19 QKALRPDMGYNTLANFR--IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKAR 76
Query: 389 DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR 448
+ I E+ + +++H N+I + + ++ E G L ++ K+ L P R
Sbjct: 77 ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER 136
Query: 449 -LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
+ + + + A+E++H+ R++H DIKP NV + K+ D GL + S +
Sbjct: 137 TVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 193
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
GT Y++PE N N KSD++S G LL EM +
Sbjct: 194 HSLV--GTPYYMSPERIHENGYN--FKSDIWSLGCLLYEM---------------AALQS 234
Query: 568 AYFPDW--IYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEM--- 622
++ D +Y + E+ D+ D + ++ + CI +P+ RP +T V ++
Sbjct: 235 PFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKR 294
Query: 623 LSSASAEAIE 632
+ + +A ++E
Sbjct: 295 MHACTASSLE 304
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 356 KLGTGGYGNVYKGKFPDGR-LVAVKVLE-KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+LG G +G VYK + + L A KV++ K+ ++++ E+ + H NI+ LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ ++ E+ G++ D + E E L +++ + A+ YLH+ +I+H
Sbjct: 104 YYENNLWILIEFCAGGAV-DAVMLELER-PLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP-- 531
D+K N+L D K++DFG++ ++ R++ GT ++APE+ M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNT--RTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 532 -SGKSDVYSYGMLLLEMIE 549
K+DV+S G+ L+EM E
Sbjct: 217 YDYKADVWSLGITLIEMAE 235
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 45/277 (16%)
Query: 357 LGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFINEVATIGRIH----HVNIIHLLG 411
LG G + VY+ + G VA+K+++K + + + V +IH H +I+ L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCEL 469
+ D + L+ E NG + L + S AR + +I G+ YLH+
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML----YLHSHG-- 132
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKA----HSRNRSVVTMTGPRGTIGYIAPEIFM 525
ILH D+ N+LL + K++DFGLA H ++ ++ GT YI+PEI
Sbjct: 133 -ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC------GTPNYISPEIAT 185
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT-TEAYFPDWIYDKLIQPEKE 584
R+ +SDV+S G + ++ + P +T + NT + D+ + E +
Sbjct: 186 RSAHGL--ESDVWSLGCMFYTLLIGRP---PFDTDTVKNTLNKVVLADYEMPSFLSIEAK 240
Query: 585 DFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
D + + ++ NP DR S++ V++
Sbjct: 241 DLIHQ---------------LLRRNPADRLSLSSVLD 262
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+++G G YG V+ GK+ G VAVKV T S E+ + H NI+ +
Sbjct: 43 KQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 415 DGSTRA----LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC--- 467
G+ LI +Y NGSL D L ++ +L +L++A + +LH
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 468 --ELRILHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPR-GTIGYIAPEI 523
+ I H D+K +N+L+ + T ++D GLA K S V R GT Y+ PE+
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEV 217
Query: 524 FMRNLGNPSGKS----DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLI 579
+L +S D+YS+G++L E+ SG E P Y L+
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEVAR--------RCVSGGIVEEYQLP---YHDLV 266
Query: 580 --QPEKEDFVE---------------EEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEM 622
P ED E D+C+ R+M + C NP R + RV +
Sbjct: 267 PSDPSYEDMREIVCIKKLRPSFPNRWSSDECL-RQMGKLMTECWAHNPASRLTALRVKKT 325
Query: 623 LSSAS 627
L+ S
Sbjct: 326 LAKMS 330
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 357 LGTGGYGNVYKGKFP----DGRLVAVKVLEKT---SNFSDNFINEVATIGRIHHVNIIHL 409
L T G GN K K G+ VAV++++KT S+ EV + ++H NI+ L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLL---SREKENLSLKPARLLEIALGVAHAIEYLHNG 466
T L+ EY G + D L R KE + R + A++Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIVSAVQYCHQK 132
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM- 525
I+H D+K +N+LLD D K++DFG + + + T G+ Y APE+F
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQG 186
Query: 526 RNLGNPSGKSDVYSYGMLLLEMI 548
+ P + DV+S G++L ++
Sbjct: 187 KKYDGP--EVDVWSLGVILYTLV 207
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 140
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIF- 195
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 140
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELIF- 195
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 355 EKLGTGGYGNVYKGK-FPDGRLVAVKVLE----KTSNFSDNFINEVATIGRIHHVNIIHL 409
E LG GG V+ + D R VAVKVL + +F F E ++H I+ +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 410 L----GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH- 464
G ++ EY+ +L D++ E + P R +E+ A+ + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQ 134
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-GTIGYIAPEI 523
NG I+H D+KP N+++ KV DFG+A+A + + + VT T GT Y++PE
Sbjct: 135 NG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ + +SDVYS G +L E++
Sbjct: 191 ARGD--SVDARSDVYSLGCVLYEVL 213
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E ++ K L+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK--DLV 160
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + K++DFGLA+ + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 260
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 356 KLGTGGYGNVYKGKFPDGR-LVAVKVLE-KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+LG G +G VYK + + L A KV++ K+ ++++ E+ + H NI+ LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ ++ E+ G++ D + E E L +++ + A+ YLH+ +I+H
Sbjct: 104 YYENNLWILIEFCAGGAV-DAVMLELER-PLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP-- 531
D+K N+L D K++DFG++ ++ R + GT ++APE+ M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNT--RXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 532 -SGKSDVYSYGMLLLEMIE 549
K+DV+S G+ L+EM E
Sbjct: 217 YDYKADVWSLGITLIEMAE 235
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E ++ K L+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK--DLV 160
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + K++DFGLA+ + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 260
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+G G +G VY+ K D G LVA+K + + F + E+ + ++ H NI+ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 416 GSTRA------LIYEYMPNG--SLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+ L+ +Y+P + SR K+ L + +L L ++ Y+H+
Sbjct: 85 SGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS-- 140
Query: 468 ELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I H DIKPQN+LLDPD K+ DFG AK R V+ R Y APE+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELIF- 195
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + DV+S G +L E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 355 EKLGTGGYGNVYKGK-FPDGRLVAVKVLE----KTSNFSDNFINEVATIGRIHHVNIIHL 409
E LG GG V+ + D R VAVKVL + +F F E ++H I+ +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 410 L----GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH- 464
G ++ EY+ +L D++ E + P R +E+ A+ + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQ 134
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-GTIGYIAPEI 523
NG I+H D+KP N+++ KV DFG+A+A + + + VT T GT Y++PE
Sbjct: 135 NG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ + +SDVYS G +L E++
Sbjct: 191 ARGD--SVDARSDVYSLGCVLYEVL 213
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 48/249 (19%)
Query: 337 LLSNYSYNDIKKMTNGFKEKLGTGGYGNVYK-------GKF-------PDGRLVAVK--- 379
+LSNYS ++ + KEK Y N Y+ GKF D + A+K
Sbjct: 9 ILSNYS--NLIYLNKYVKEK---DKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYE 63
Query: 380 --VLEKTSNFS-------------DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYE 424
+LEK +F+ D+F NE+ I I + + G + +IYE
Sbjct: 64 KSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYE 123
Query: 425 YMPNGSLGDL----LSREKENLSLKPARLLE-IALGVAHAIEYLHNGCELRILHLDIKPQ 479
YM N S+ +K P ++++ I V ++ Y+HN E I H D+KP
Sbjct: 124 YMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPS 181
Query: 480 NVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYS 539
N+L+D + K+SDFG ++ + + G RGT ++ PE F K D++S
Sbjct: 182 NILMDKNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWS 237
Query: 540 YGMLLLEMI 548
G+ L M
Sbjct: 238 LGICLYVMF 246
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 360 GGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGST- 418
G +G V+K + + VAVK+ S EV ++ + H NI+ +G G++
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV 93
Query: 419 ---RALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH-------NGCE 468
LI + GSL D L K N+ + L IA +A + YLH +G +
Sbjct: 94 DVDLWLITAFHEKGSLSDFL---KANV-VSWNELCHIAETMARGLAYLHEDIPGLKDGHK 149
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
I H DIK +NVLL + T ++DFGLA +S G GT Y+APE+ +
Sbjct: 150 PAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAI 209
Query: 529 G---NPSGKSDVYSYGMLLLEM 547
+ + D+Y+ G++L E+
Sbjct: 210 NFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E ++ K L+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK--DLV 160
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + K++DFGLA+ + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 260
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 29/205 (14%)
Query: 357 LGTGGYGNVYKGKFP----DGRLVAVKVLEKT---SNFSDNFINEVATIGRIHHVNIIHL 409
L T G GN K K G+ VAVK+++KT S+ EV + ++H NI+ L
Sbjct: 12 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLL-----SREKENLSLKPARLLEIALGVAHAIEYLH 464
T L+ EY G + D L +EKE A+ +I A++Y H
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKE----ARAKFRQIV----SAVQYCH 123
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
I+H D+K +N+LLD D K++DFG + + + T G+ Y APE+F
Sbjct: 124 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELF 177
Query: 525 M-RNLGNPSGKSDVYSYGMLLLEMI 548
+ P + DV+S G++L ++
Sbjct: 178 QGKKYDGP--EVDVWSLGVILYTLV 200
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 353 FKEKLGTGGYGNVYKG-KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRIHHVNIIHL 409
E +GTGG+ V G +VA+K+++K + SD E+ + + H +I L
Sbjct: 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQL 73
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ ++ EY P G L D + + + LS + R+ + + A+ Y+H+
Sbjct: 74 YHVLETANKIFMVLEYCPGGELFDYIISQ-DRLSEEETRV--VFRQIVSAVAYVHSQ--- 127
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
H D+KP+N+L D K+ DFGL N+ T G++ Y APE+ ++
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPEL-IQGKS 185
Query: 530 NPSGKSDVYSYGMLL 544
++DV+S G+LL
Sbjct: 186 YLGSEADVWSMGILL 200
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 23/213 (10%)
Query: 356 KLGTGGYGNVYKGKFPD--GRLVA---VKVLEKTSNFSDNFINEVATIGRIH---HVNII 407
++G G YG V+K + GR VA V+V + I EVA + + H N++
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 408 HLLGFCC----DGSTR-ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
L C D T+ L++E++ + L L + E + + ++ + +++
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDF 135
Query: 463 LHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
LH+ R++H D+KPQN+L+ K++DFGLA+ +S ++ ++ T+ Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAPE 189
Query: 523 IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLR 555
+ +++ + + D++S G + EM K R
Sbjct: 190 VLLQS--SYATPVDLWSVGCIFAEMFRRKPLFR 220
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E ++ K L+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK--DLV 160
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + K++DFGLA+ + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 260
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNIIHL 409
+ LG G +G V G+ G VAVK+L + S + + E+ + H +II L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ ++ EY+ G L D + + ++ RL + L A++Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS---AVDYCHRHM-- 131
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H D+KP+NVLLD K++DFGL+ S + T G+ Y APE+ L
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVISGRL- 186
Query: 530 NPSGKSDVYSYGMLLLEMI 548
+ D++S G++L ++
Sbjct: 187 YAGPEVDIWSCGVILYALL 205
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 23/213 (10%)
Query: 356 KLGTGGYGNVYKGK--FPDGRLVA---VKVLEKTSNFSDNFINEVATIGRIH---HVNII 407
++G G YG V+K + GR VA V+V + I EVA + + H N++
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 408 HLLGFCC----DGSTR-ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
L C D T+ L++E++ + L L + E + + ++ + +++
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDF 135
Query: 463 LHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
LH+ R++H D+KPQN+L+ K++DFGLA+ +S ++ ++ T+ Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAPE 189
Query: 523 IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLR 555
+ +++ + + D++S G + EM K R
Sbjct: 190 VLLQS--SYATPVDLWSVGCIFAEMFRRKPLFR 220
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 356 KLGTGGYGNVYKGKFPDGR-LVAVKVLE-KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+LG G +G VYK + + L A KV++ K+ ++++ E+ + H NI+ LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ ++ E+ G++ D + E E L +++ + A+ YLH+ +I+H
Sbjct: 104 YYENNLWILIEFCAGGAV-DAVMLELER-PLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP-- 531
D+K N+L D K++DFG++ ++ R + GT ++APE+ M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNT--RXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 532 -SGKSDVYSYGMLLLEMIE 549
K+DV+S G+ L+EM E
Sbjct: 217 YDYKADVWSLGITLIEMAE 235
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 356 KLGTGGYGNVYKGKFPDGRL---VAVKVLEKTSNFSDN--FINEVATIGRIHHVNIIHLL 410
+LG G +G+V +G + + VA+KVL++ + +D + E + ++ + I+ L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G C L+ E G L L ++E + + + + E+ V+ ++YL E
Sbjct: 403 G-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLE---EKN 456
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTM-TGPRGTIGYIAPEIFMRNLG 529
+H ++ +NVLL K+SDFGL+KA + S T + + + + APE N
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI--NFR 514
Query: 530 NPSGKSDVYSYGMLLLEMI 548
S +SDV+SYG+ + E +
Sbjct: 515 KFSSRSDVWSYGVTMWEAL 533
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 23/213 (10%)
Query: 356 KLGTGGYGNVYKGKFPD--GRLVA---VKVLEKTSNFSDNFINEVATIGRIH---HVNII 407
++G G YG V+K + GR VA V+V + I EVA + + H N++
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 408 HLLGFCC----DGSTR-ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
L C D T+ L++E++ + L L + E + + ++ + +++
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDF 135
Query: 463 LHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
LH+ R++H D+KPQN+L+ K++DFGLA+ +S ++ ++ T+ Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAPE 189
Query: 523 IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLR 555
+ +++ + + D++S G + EM K R
Sbjct: 190 VLLQS--SYATPVDLWSVGCIFAEMFRRKPLFR 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 353 FKEKLGTGGYG--NVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
F + +G+G +G + + K LVAVK +E+ + +N E+ + H NI+
Sbjct: 24 FVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ A+I EY G L + + S AR L + Y H+ ++
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQL--LSGVSYCHS---MQ 136
Query: 471 ILHLDIKPQNVLLDPDFTP--KVSDFGLAKA---HSRNRSVVTMTGPRGTIGYIAPEIFM 525
I H D+K +N LLD P K+ DFG +K+ HS+ +S V GT YIAPE+ +
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVLL 190
Query: 526 RNLGNPSGK-SDVYSYGMLLLEMI 548
R + GK +DV+S G+ L M+
Sbjct: 191 RQEYD--GKIADVWSCGVTLYVML 212
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 357 LGTGGYGNVYKGKFP----DGRLVAVKVLEKT---SNFSDNFINEVATIGRIHHVNIIHL 409
L T G GN K K G+ VAVK+++KT S+ EV + ++H NI+ L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLL---SREKENLSLKPARLLEIALGVAHAIEYLHNG 466
T L+ EY G + D L R KE + R + A++Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIVSAVQYCHQK 132
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM- 525
I+H D+K +N+LLD D K++DFG + + + G Y APE+F
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC---GAPPYAAPELFQG 186
Query: 526 RNLGNPSGKSDVYSYGMLLLEMI 548
+ P + DV+S G++L ++
Sbjct: 187 KKYDGP--EVDVWSLGVILYTLV 207
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 32/208 (15%)
Query: 356 KLGTGGYGNVYKGKFPDGR-LVAVKVLEKT--------------SNFSDNFINEVATIGR 400
KLG+G YG V K +G A+KV++K+ F + NE++ +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 401 IHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGD-LLSREKENLSLKPARLLEIALGVAHA 459
+ H NII L D L+ E+ G L + +++R K + + +I G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGIC-- 160
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPD---FTPKVSDFGLAKAHSRNRSVVTMTGPRGTI 516
YLH I+H DIKP+N+LL+ K+ DFGL+ S++ + GT
Sbjct: 161 --YLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLGTA 212
Query: 517 GYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
YIAPE+ + K DV+S G+++
Sbjct: 213 YYIAPEVLKKKYNE---KCDVWSCGVIM 237
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 25/201 (12%)
Query: 359 TGGYGNVYKGKFP----DGRLVAVKVLEKTS---NFSDNFINEVATIGRIHHVNIIHLLG 411
T G GN K K GR VAVK+++KT EV + ++H NI+ L
Sbjct: 22 TIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 412 FCCDGSTRALIYEYMPNGSLGDLL---SREKENLSLKPARLLEIALGVAHAIEYLHNGCE 468
T L+ EY G + D L R KE + R + A++Y H
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIVSAVQYCHQKY- 134
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM-RN 527
I+H D+K +N+LLD D K++DFG + + + T G+ Y APE+F +
Sbjct: 135 --IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC---GSPPYAAPELFQGKK 189
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
P + DV+S G++L ++
Sbjct: 190 YDGP--EVDVWSLGVILYTLV 208
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 34/217 (15%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVL---EKTSNFSDNFINEVATIGRIHHVNIIHL 409
+E +G G +G V++GK+ G VAVK+ E+ S F + I + + H NI
Sbjct: 8 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENI--- 60
Query: 410 LGFCC----DGSTRA---LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
LGF D T L+ +Y +GSL D L+R ++ ++++AL A + +
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAH 116
Query: 463 LHN---GCELR--ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR--GT 515
LH G + + I H D+K +N+L+ + T ++D GLA H + + GT
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 516 IGYIAPEIF-----MRNLGNPSGKSDVYSYGMLLLEM 547
Y+APE+ M++ ++D+Y+ G++ E+
Sbjct: 177 KRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEI 212
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 357 LGTGGYGNVYK-GKFPDGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
+GTG YG K + DG+++ K L+ T ++EV + + H NI+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 413 CCD--GSTRALIYEYMPNGSLGDLLSR-EKENLSLKPARLLEIALGVAHAIEYLHNGCE- 468
D +T ++ EY G L ++++ KE L +L + + A++ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 469 -LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
+LH D+KP NV LD K+ DFGLA+ + + S GT Y++PE R
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KAFVGTPYYMSPEQMNRM 191
Query: 528 LGNPSGKSDVYSYGMLLLEM 547
N KSD++S G LL E+
Sbjct: 192 SYNE--KSDIWSLGCLLYEL 209
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 33/207 (15%)
Query: 357 LGTGGYGNVYKGKFPDG----RLVAVKVLEKTSNFSDNFIN---EVATIGRIHHVNIIHL 409
LG G +G V+ K G +L A+KVL+K + + + E + ++H I+ L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 410 -LGFCCDGSTRALIYEYMPNGSLGDLLSRE----KENLSLKPARLLEIALGVAHAIEYLH 464
F +G LI +++ G L LS+E +E++ L E+AL A+++LH
Sbjct: 92 HYAFQTEGKL-YLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELAL----ALDHLH 143
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKA---HSRNRSVVTMTGPRGTIGYIAP 521
+ L I++ D+KP+N+LLD + K++DFGL+K H + GT+ Y+AP
Sbjct: 144 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-----GTVEYMAP 195
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E+ R S +D +S+G+L+ EM+
Sbjct: 196 EVVNRRGHTQS--ADWWSFGVLMFEML 220
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E ++ K L+
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK--DLV 149
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + K++DFGLA+ + T
Sbjct: 150 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 207 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 249
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 250 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II LLG C +I EY G+L + L + E ++ K L+
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK--DLV 160
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + K++DFGLA+ + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 260
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 357 LGTGGYGNVYK-GKFPDGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
+GTG YG K + DG+++ K L+ T ++EV + + H NI+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 413 CCD--GSTRALIYEYMPNGSLGDLLSR-EKENLSLKPARLLEIALGVAHAIEYLHNGCE- 468
D +T ++ EY G L ++++ KE L +L + + A++ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 469 -LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
+LH D+KP NV LD K+ DFGLA+ + + S GT Y++PE R
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV--GTPYYMSPEQMNRM 191
Query: 528 LGNPSGKSDVYSYGMLLLEM 547
N KSD++S G LL E+
Sbjct: 192 SYNE--KSDIWSLGCLLYEL 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 355 EKLGTGGYGNVYKGK-FPDGRLVAVKVLE----KTSNFSDNFINEVATIGRIHHVNIIHL 409
E LG GG V+ + D R VAVKVL + +F F E ++H I+ +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 410 L----GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH- 464
G ++ EY+ +L D++ E + P R +E+ A+ + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQ 134
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-GTIGYIAPEI 523
NG I+H D+KP N+L+ KV DFG+A+A + + + V T GT Y++PE
Sbjct: 135 NG----IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMI 548
+ + +SDVYS G +L E++
Sbjct: 191 ARGD--SVDARSDVYSLGCVLYEVL 213
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 34/217 (15%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVL---EKTSNFSDNFINEVATIGRIHHVNIIHL 409
+E +G G +G V++GK+ G VAVK+ E+ S F + I + + H NI
Sbjct: 7 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENI--- 59
Query: 410 LGFCC----DGSTRA---LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
LGF D T L+ +Y +GSL D L+R ++ ++++AL A + +
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAH 115
Query: 463 LHN---GCELR--ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR--GT 515
LH G + + I H D+K +N+L+ + T ++D GLA H + + GT
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 516 IGYIAPEIF-----MRNLGNPSGKSDVYSYGMLLLEM 547
Y+APE+ M++ ++D+Y+ G++ E+
Sbjct: 176 KRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 34/217 (15%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVL---EKTSNFSDNFINEVATIGRIHHVNIIHL 409
+E +G G +G V++GK+ G VAVK+ E+ S F + I + + H NI
Sbjct: 10 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENI--- 62
Query: 410 LGFCC----DGSTRA---LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
LGF D T L+ +Y +GSL D L+R ++ ++++AL A + +
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAH 118
Query: 463 LHN---GCELR--ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR--GT 515
LH G + + I H D+K +N+L+ + T ++D GLA H + + GT
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 516 IGYIAPEIF-----MRNLGNPSGKSDVYSYGMLLLEM 547
Y+APE+ M++ ++D+Y+ G++ E+
Sbjct: 179 KRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEI 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 22/202 (10%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFS------DNFINEVATIGRIHHVNI 406
FK KLG+G +G+V+ + R ++ + KT N + E+ + + H NI
Sbjct: 26 FKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGD-LLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
I + D ++ E G L + ++S + +L + E+ + +A+ Y H+
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 466 GCELRILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
++H D+KP+N+L P K+ DFGLA+ + T GT Y+APE
Sbjct: 143 Q---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPE 196
Query: 523 IFMRNLGNPSGKSDVYSYGMLL 544
+F R++ + K D++S G+++
Sbjct: 197 VFKRDV---TFKCDIWSAGVVM 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E ++ K L+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK--DLV 160
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + +++DFGLA+ + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 260
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 133/302 (44%), Gaps = 50/302 (16%)
Query: 348 KMTNGFKEKLGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVAT 397
K+T G + LG G +G V K K + VAVK+L+ + D + ++E+
Sbjct: 82 KLTLG--KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 139
Query: 398 IGRI-HHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------EN 441
+ I H NII+LLG C +I EY G+L + L + E
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 442 LSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHS 501
++ K L+ +A +EYL + + +H D+ +NVL+ + K++DFGLA+ +
Sbjct: 200 MTFK--DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 254
Query: 502 RNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTS 561
T R + ++APE + + +SDV+S+G+L+ E+ T
Sbjct: 255 NIDYYKKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLG 302
Query: 562 GSNTTEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVE 621
GS +P ++L + KE ++ ++ ++ C P RP+ ++VE
Sbjct: 303 GSP-----YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
Query: 622 ML 623
L
Sbjct: 358 DL 359
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 34/217 (15%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVL---EKTSNFSDNFINEVATIGRIHHVNIIHL 409
+E +G G +G V++GK+ G VAVK+ E+ S F + I + + H NI
Sbjct: 13 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENI--- 65
Query: 410 LGFCC----DGSTRA---LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
LGF D T L+ +Y +GSL D L+R ++ ++++AL A + +
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAH 121
Query: 463 LHN---GCELR--ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR--GT 515
LH G + + I H D+K +N+L+ + T ++D GLA H + + GT
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 516 IGYIAPEIF-----MRNLGNPSGKSDVYSYGMLLLEM 547
Y+APE+ M++ ++D+Y+ G++ E+
Sbjct: 182 KRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEI 217
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
E +G G YG V++G + G VAVK+ S E+ + H NI LGF
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI---LGFIA 69
Query: 415 -DGSTR------ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH--- 464
D ++R LI Y GSL D L + +L L I L +A + +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 465 --NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTM-TGPR-GTIGYIA 520
+ I H D+K +N+L+ + ++D GLA HS++ + + + PR GT Y+A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 521 PEIFMRNLG----NPSGKSDVYSYGMLLLEM 547
PE+ + + + D++++G++L E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E ++ K L+
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK--DLV 152
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + K++DFGLA+ + T
Sbjct: 153 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 210 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 252
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 253 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
E +G G YG V++G + G VAVK+ S E+ + H NI LGF
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI---LGFIA 69
Query: 415 -DGSTR------ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH--- 464
D ++R LI Y GSL D L + +L L I L +A + +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 465 --NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTM-TGPR-GTIGYIA 520
+ I H D+K +N+L+ + ++D GLA HS++ + + + PR GT Y+A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 521 PEIFMRNLG----NPSGKSDVYSYGMLLLEM 547
PE+ + + + D++++G++L E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 34/217 (15%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVL---EKTSNFSDNFINEVATIGRIHHVNIIHL 409
+E +G G +G V++GK+ G VAVK+ E+ S F + I + + H NI
Sbjct: 33 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENI--- 85
Query: 410 LGFCC----DGSTRA---LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
LGF D T L+ +Y +GSL D L+R ++ ++++AL A + +
Sbjct: 86 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAH 141
Query: 463 LHN---GCELR--ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR--GT 515
LH G + + I H D+K +N+L+ + T ++D GLA H + + GT
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
Query: 516 IGYIAPEIF-----MRNLGNPSGKSDVYSYGMLLLEM 547
Y+APE+ M++ ++D+Y+ G++ E+
Sbjct: 202 KRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEI 237
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I EY G+L + L + E ++ K L+
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK--DLV 147
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + K++DFGLA+ + T
Sbjct: 148 SCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 205 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 247
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 248 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
+E +G G +G V++GK+ G VAVK+ S E+ + H NI LGF
Sbjct: 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGF 101
Query: 413 CC----DGSTRA---LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
D T L+ +Y +GSL D L+R ++ ++++AL A + +LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHM 157
Query: 466 ---GCELR--ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR--GTIGY 518
G + + I H D+K +N+L+ + T ++D GLA H + + GT Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 519 IAPEIF-----MRNLGNPSGKSDVYSYGMLLLEM 547
+APE+ M++ ++D+Y+ G++ E+
Sbjct: 218 MAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEI 250
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 357 LGTGGYGNVYKGKFP----DGRLVAVKVLEKT---SNFSDNFINEVATIGRIHHVNIIHL 409
L T G GN K K G+ VAV++++KT S+ EV + ++H NI+ L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLL---SREKENLSLKPARLLEIALGVAHAIEYLHNG 466
T L+ EY G + D L R KE + R + A++Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIVSAVQYCHQK 132
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM- 525
I+H D+K +N+LLD D K++DFG + + + G+ Y APE+F
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC---GSPPYAAPELFQG 186
Query: 526 RNLGNPSGKSDVYSYGMLLLEMI 548
+ P + DV+S G++L ++
Sbjct: 187 KKYDGP--EVDVWSLGVILYTLV 207
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 23/226 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFIN---------EVATIGRIHHVNI 406
LG+G +G V+ + + V VK ++K D +I E+A + R+ H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I +L + L+ E +GS DL + + L I + A+ YL
Sbjct: 92 IKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK 149
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I+H DIK +N+++ DFT K+ DFG A R + T GTI Y APE+ M
Sbjct: 150 ---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEYCAPEVLM- 202
Query: 527 NLGNP--SGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
GNP + +++S G+ L ++ E+ E T + Y
Sbjct: 203 --GNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYL 246
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 33/207 (15%)
Query: 357 LGTGGYGNVYKGKFPDG----RLVAVKVLEKTSNFSDNFIN---EVATIGRIHHVNIIHL 409
LG G +G V+ K G +L A+KVL+K + + + E + ++H I+ L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 410 -LGFCCDGSTRALIYEYMPNGSLGDLLSRE----KENLSLKPARLLEIALGVAHAIEYLH 464
F +G LI +++ G L LS+E +E++ L E+AL A+++LH
Sbjct: 93 HYAFQTEGKL-YLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELAL----ALDHLH 144
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKA---HSRNRSVVTMTGPRGTIGYIAP 521
+ L I++ D+KP+N+LLD + K++DFGL+K H + GT+ Y+AP
Sbjct: 145 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-----GTVEYMAP 196
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E+ R S +D +S+G+L+ EM+
Sbjct: 197 EVVNRRGHTQS--ADWWSFGVLMFEML 221
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
E +G G YG V++G + G VAVK+ S E+ + H NI LGF
Sbjct: 43 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI---LGFIA 98
Query: 415 -DGSTR------ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH-AIEYLHNG 466
D ++R LI Y GSL D L + +L IA G+AH IE
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTM-TGPR-GTIGYIAPEIF 524
+ I H D+K +N+L+ + ++D GLA HS++ + + + PR GT Y+APE+
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 525 MRNLG----NPSGKSDVYSYGMLLLEM 547
+ + + D++++G++L E+
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 33/207 (15%)
Query: 357 LGTGGYGNVYKGKFPDG----RLVAVKVLEKTSNFSDNFIN---EVATIGRIHHVNIIHL 409
LG G +G V+ K G +L A+KVL+K + + + E + ++H I+ L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 410 -LGFCCDGSTRALIYEYMPNGSLGDLLSRE----KENLSLKPARLLEIALGVAHAIEYLH 464
F +G LI +++ G L LS+E +E++ L E+AL A+++LH
Sbjct: 92 HYAFQTEGKL-YLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELAL----ALDHLH 143
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKA---HSRNRSVVTMTGPRGTIGYIAP 521
+ L I++ D+KP+N+LLD + K++DFGL+K H + GT+ Y+AP
Sbjct: 144 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-----GTVEYMAP 195
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E+ R S +D +S+G+L+ EM+
Sbjct: 196 EVVNRRGHTQS--ADWWSFGVLMFEML 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 357 LGTGGYGNVYKGKFP----DGRLVAVKVLEKT---SNFSDNFINEVATIGRIHHVNIIHL 409
L T G GN K K G+ VAVK+++KT S+ EV ++H NI+ L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLL---SREKENLSLKPARLLEIALGVAHAIEYLHNG 466
T L+ EY G + D L R KE + R + A++Y H
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR------QIVSAVQYCHQK 132
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM- 525
I+H D+K +N+LLD D K++DFG + + + G Y APE+F
Sbjct: 133 F---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC---GAPPYAAPELFQG 186
Query: 526 RNLGNPSGKSDVYSYGMLLLEMI 548
+ P + DV+S G++L ++
Sbjct: 187 KKYDGP--EVDVWSLGVILYTLV 207
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNIIHL 409
+ LG G +G V GK G VAVK+L + S + + E+ + H +II L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
S ++ EY+ G L D + + + RL + L ++Y H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS---GVDYCHRHM-- 136
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM-RNL 528
++H D+KP+NVLLD K++DFGL+ S + G+ Y APE+ R
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEVISGRLY 192
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
P + D++S G++L ++
Sbjct: 193 AGP--EVDIWSSGVILYALL 210
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL---VAVKVLE----KTSNFSDNFINEVATIGRIHHVNII 407
E LG GG V+ + D RL VAVKVL + +F F E ++H I+
Sbjct: 18 EILGFGGMSEVHLAR--DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 408 HLLGFCCDGSTRA-----LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
+ + T A ++ EY+ +L D++ E + P R +E+ A+ +
Sbjct: 76 AVYA-TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNF 131
Query: 463 LH-NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-GTIGYIA 520
H NG I+H D+KP N+++ KV DFG+A+A + + + VT T GT Y++
Sbjct: 132 SHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 521 PEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
PE + + +SDVYS G +L E++
Sbjct: 188 PEQARGD--SVDARSDVYSLGCVLYEVL 213
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 355 EKLGTGGYGNVYKGK-FPDGRLVAVK---VLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
+K+G G +G K DGR +K + +S + EVA + + H NI+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ + ++ +Y G L ++ +K L + ++L+ + + A++++H+ +
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVL-FQEDQILDWFVQICLALKHVHDR---K 145
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
ILH DIK QN+ L D T ++ DFG+A+ N +V GT Y++PEI N
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICENKPYN 203
Query: 531 PSGKSDVYSYGMLLLEM 547
KSD+++ G +L E+
Sbjct: 204 --NKSDIWALGCVLYEL 218
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 40/288 (13%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHL 409
+E +G+G V P VA+K LEK D + E+ + + HH NI+
Sbjct: 14 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 73
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSR-----EKENLSLKPARLLEIALGVAHAIEYLH 464
L+ + + GS+ D++ E ++ L + + I V +EYLH
Sbjct: 74 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 133
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFG----LAKAHSRNRSVVTMTGPRGTIGYIA 520
++ H D+K N+LL D + +++DFG LA R+ V T GT ++A
Sbjct: 134 KNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTPCWMA 189
Query: 521 PEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQ 580
PE+ M + K+D++S+G+ +E+ +G+ Y P + +Q
Sbjct: 190 PEV-MEQVRGYDFKADIWSFGITAIEL------------ATGAAPYHKYPPMKVLMLTLQ 236
Query: 581 ---PEKEDFVEEEDDCIA-----RKMIIVGLWCIQINPKDRPSMTRVV 620
P E V++++ RKMI + C+Q +P+ RP+ ++
Sbjct: 237 NDPPSLETGVQDKEMLKKYGKSFRKMISL---CLQKDPEKRPTAAELL 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 40/288 (13%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHL 409
+E +G+G V P VA+K LEK D + E+ + + HH NI+
Sbjct: 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 78
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSR-----EKENLSLKPARLLEIALGVAHAIEYLH 464
L+ + + GS+ D++ E ++ L + + I V +EYLH
Sbjct: 79 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFG----LAKAHSRNRSVVTMTGPRGTIGYIA 520
++ H D+K N+LL D + +++DFG LA R+ V T GT ++A
Sbjct: 139 KNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTPCWMA 194
Query: 521 PEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQ 580
PE+ M + K+D++S+G+ +E+ +G+ Y P + +Q
Sbjct: 195 PEV-MEQVRGYDFKADIWSFGITAIEL------------ATGAAPYHKYPPMKVLMLTLQ 241
Query: 581 ---PEKEDFVEEEDDCIA-----RKMIIVGLWCIQINPKDRPSMTRVV 620
P E V++++ RKMI + C+Q +P+ RP+ ++
Sbjct: 242 NDPPSLETGVQDKEMLKKYGKSFRKMISL---CLQKDPEKRPTAAELL 286
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 18/195 (9%)
Query: 355 EKLGTGGYGNVYK-GKFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRIHHVNIIHLLG 411
E LG G +G V+K + G +A K++ KT D NE++ + ++ H N+I L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKII-KTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ L+ EY+ G L D + E NL+ L+ L + E + + ++ I
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLT-----ELDTILFMKQICEGIRHMHQMYI 208
Query: 472 LHLDIKPQNVL-LDPDFTP-KVSDFGLAKAHS-RNRSVVTMTGPRGTIGYIAPEIFMRNL 528
LHLD+KP+N+L ++ D K+ DFGLA+ + R + V GT ++APE+ N
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF----GTPEFLAPEVV--NY 262
Query: 529 GNPSGKSDVYSYGML 543
S +D++S G++
Sbjct: 263 DFVSFPTDMWSVGVI 277
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNIIHL 409
+ LG G +G V G+ G VAVK+L + S + + E+ + H +II L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ ++ EY+ G L D + + ++ RL + L A++Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS---AVDYCHRHM-- 131
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
++H D+KP+NVLLD K++DFGL+ S + G+ Y APE+ L
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVISGRL- 186
Query: 530 NPSGKSDVYSYGMLLLEMI 548
+ D++S G++L ++
Sbjct: 187 YAGPEVDIWSCGVILYALL 205
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 89/197 (45%), Gaps = 22/197 (11%)
Query: 357 LGTGGYGNVY--KGKFPDGRLVAVKVLEK----TSNFSDNFINEVATIGRIHHVNIIHLL 410
LG G +G V K K G+ AVKV+ K ++ + EV + ++ H NI L
Sbjct: 34 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
F D L+ E G L D + K + AR++ L I Y H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYXHKN---K 146
Query: 471 ILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D ++ DFGL+ ++ GT YIAPE+
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---XKDKIGTAYYIAPEVLH-- 201
Query: 528 LGNPSGKSDVYSYGMLL 544
G K DV+S G++L
Sbjct: 202 -GTYDEKCDVWSTGVIL 217
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 357 LGTGGYGNVYK-GKFPDGRLVAVKVLE---KTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
+GTG YG K + DG+++ K L+ T ++EV + + H NI+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 413 CCD--GSTRALIYEYMPNGSLGDLLSR-EKENLSLKPARLLEIALGVAHAIEYLHNGCE- 468
D +T ++ EY G L ++++ KE L +L + + A++ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 469 -LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
+LH D+KP NV LD K+ DFGLA+ + + GT Y++PE R
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV--GTPYYMSPEQMNRM 191
Query: 528 LGNPSGKSDVYSYGMLLLEM 547
N KSD++S G LL E+
Sbjct: 192 SYNE--KSDIWSLGCLLYEL 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL---VAVKVLE----KTSNFSDNFINEVATIGRIHHVNII 407
E LG GG V+ + D RL VAVKVL + +F F E ++H I+
Sbjct: 18 EILGFGGMSEVHLAR--DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 408 HLL----GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
+ G ++ EY+ +L D++ E + P R +E+ A+ +
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFS 132
Query: 464 H-NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-GTIGYIAP 521
H NG I+H D+KP N+++ KV DFG+A+A + + + VT T GT Y++P
Sbjct: 133 HQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E + + +SDVYS G +L E++
Sbjct: 189 EQARGD--SVDARSDVYSLGCVLYEVL 213
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I Y G+L + L + E ++ K L+
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK--DLV 160
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + K++DFGLA+ + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 260
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 339 SNYSYNDIKKMTNGFKEKLGTGGYGNVYK-GKFPDGRLVAVKVLEKTSNFSDNFI-NEVA 396
S Y Y DI E+LG+G +G V++ + GR+ K + + NE++
Sbjct: 48 SVYDYYDIL-------EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEIS 100
Query: 397 TIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGV 456
+ ++HH +I+L D LI E++ G L D ++ E+ + A ++
Sbjct: 101 IMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIA--AEDYKMSEAEVINYMRQA 158
Query: 457 AHAIEYLHNGCELRILHLDIKPQNVLLDPD--FTPKVSDFGLAKAHSRNRSVVTMTGPRG 514
++++H E I+HLDIKP+N++ + + K+ DFGLA + + V T
Sbjct: 159 CEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---A 212
Query: 515 TIGYIAPEIFMRNLGNPSG-KSDVYSYGML 543
T + APEI R P G +D+++ G+L
Sbjct: 213 TAEFAAPEIVDR---EPVGFYTDMWAIGVL 239
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 35/220 (15%)
Query: 355 EKLGTGGYGNVYKG-KFPDGRLVAVK-VLEKTSNFSD--NFINEVATIGRIH-HVNIIHL 409
+KLG G YG V+K G +VAVK + + N +D E+ + + H NI++L
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 410 LGFCCDGSTRA--LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L + R L+++YM DL + + N+ L+P + + I+YLH+G
Sbjct: 75 LNVLRADNDRDVYLVFDYMET----DLHAVIRANI-LEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVT------------------- 508
+LH D+KP N+LL+ + KV+DFGL+++ R V
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 509 MTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
+T T Y APEI + + G D++S G +L E++
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKG-IDMWSLGCILGEIL 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLEKTSNFSDN----FINEVATIGRIHHVNIIHLL 410
+G G +G+V++G + P+ +AV + + SD+ F+ E T+ + H +I+ L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + +I E G L L K +L L A L+ A ++ A+ YL + R
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESK---R 128
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +NVL+ + K+ DFGL++ + + + + + I ++APE N
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESI--NFRR 185
Query: 531 PSGKSDVYSYGMLLLEMI 548
+ SDV+ +G+ + E++
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 41/245 (16%)
Query: 357 LGTGGYG--NVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+G G +G + + K + LVAVK +E+ +N E+ + H NI+
Sbjct: 27 IGAGNFGVARLMRDKQAN-ELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 415 DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL--EIALGVAHAIEYLHNGCELRIL 472
+ A++ EY G L + + S AR ++ GV++A +++
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYA-------HAMQVA 137
Query: 473 HLDIKPQNVLLDPDFTP--KVSDFGLAKA---HSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
H D+K +N LLD P K++DFG +KA HS+ +S V GT YIAPE+ ++
Sbjct: 138 HRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV------GTPAYIAPEVLLKK 191
Query: 528 LGNPSGK-SDVYSYGMLLLEMI---------EEKKHLRPTETTSGSNTTEAYFPDWIYDK 577
+ GK +DV+S G+ L M+ EE K+ R +T + PD+++
Sbjct: 192 EYD--GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFR--KTIHRILNVQYAIPDYVH-- 245
Query: 578 LIQPE 582
I PE
Sbjct: 246 -ISPE 249
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLEKTSNFSDN----FINEVATIGRIHHVNIIHLL 410
+G G +G+V++G + P+ +AV + + SD+ F+ E T+ + H +I+ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + +I E G L L K +L L A L+ A ++ A+ YL + R
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESK---R 131
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +NVL+ + K+ DFGL++ + + + + + I ++APE N
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESI--NFRR 188
Query: 531 PSGKSDVYSYGMLLLEMI 548
+ SDV+ +G+ + E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLEKTSNFSDN----FINEVATIGRIHHVNIIHLL 410
+G G +G+V++G + P+ +AV + + SD+ F+ E T+ + H +I+ L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + +I E G L L K +L L A L+ A ++ A+ YL + R
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESK---R 133
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +NVL+ + K+ DFGL++ + + + + + I ++APE N
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESI--NFRR 190
Query: 531 PSGKSDVYSYGMLLLEMI 548
+ SDV+ +G+ + E++
Sbjct: 191 FTSASDVWMFGVCMWEIL 208
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL---VAVKVLE----KTSNFSDNFINEVATIGRIHHVNII 407
E LG GG V+ + D RL VAVKVL + +F F E ++H I+
Sbjct: 35 EILGFGGMSEVHLAR--DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 92
Query: 408 HLL----GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
+ G ++ EY+ +L D++ E + P R +E+ A+ +
Sbjct: 93 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFS 149
Query: 464 H-NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-GTIGYIAP 521
H NG I+H D+KP N+++ KV DFG+A+A + + + VT T GT Y++P
Sbjct: 150 HQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 205
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEMI 548
E + + +SDVYS G +L E++
Sbjct: 206 EQARGD--SVDARSDVYSLGCVLYEVL 230
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLEKTSNFSDN----FINEVATIGRIHHVNIIHLL 410
+G G +G+V++G + P+ +AV + + SD+ F+ E T+ + H +I+ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + +I E G L L K +L L A L+ A ++ A+ YL + R
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYLESK---R 131
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +NVL+ + K+ DFGL++ + + + + + I ++APE N
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESI--NFRR 188
Query: 531 PSGKSDVYSYGMLLLEMI 548
+ SDV+ +G+ + E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 12/203 (5%)
Query: 353 FKEKLGT-GGYGNVYKGKFPDGR-LVAVKVLE-KTSNFSDNFINEVATIGRIHHVNIIHL 409
F E +G G +G VYK + + L A KV++ K+ ++++ E+ + H NI+ L
Sbjct: 13 FWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 72
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
L + ++ E+ G++ D + E E L +++ + A+ YLH+
Sbjct: 73 LDAFYYENNLWILIEFCAGGAV-DAVMLELER-PLTESQIQVVCKQTLDALNYLHDN--- 127
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
+I+H D+K N+L D K++DFG++ ++R + GT ++APE+ M
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-XIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 530 NPSG---KSDVYSYGMLLLEMIE 549
K+DV+S G+ L+EM E
Sbjct: 187 KDRPYDYKADVWSLGITLIEMAE 209
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 48/293 (16%)
Query: 357 LGTGGYGNVY--------KGKFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVN 405
LG G +G V K K + VAVK+L+ + D + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREK---------------ENLSLKPARLL 450
II+LLG C +I Y G+L + L + E ++ K L+
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK--DLV 160
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
+A +EYL + + +H D+ +NVL+ + K++DFGLA+ + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
R + ++APE + + +SDV+S+G+L+ E+ T GS +
Sbjct: 218 NGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIF----------TLGGSP-----Y 260
Query: 571 PDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEML 623
P ++L + KE ++ ++ ++ C P RP+ ++VE L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLEKTSNFSDN----FINEVATIGRIHHVNIIHLL 410
+G G +G+V++G + P+ +AV + + SD+ F+ E T+ + H +I+ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + +I E G L L K +L L A L+ A ++ A+ YL + R
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESK---R 131
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +NVL+ + K+ DFGL++ + + + + + I ++APE N
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESI--NFRR 188
Query: 531 PSGKSDVYSYGMLLLEMI 548
+ SDV+ +G+ + E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLEKTSNFSDN----FINEVATIGRIHHVNIIHLL 410
+G G +G+V++G + P+ +AV + + SD+ F+ E T+ + H +I+ L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + +I E G L L K +L L A L+ A ++ A+ YL + R
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESK---R 136
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +NVL+ + K+ DFGL++ + + + + + I ++APE N
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESI--NFRR 193
Query: 531 PSGKSDVYSYGMLLLEMI 548
+ SDV+ +G+ + E++
Sbjct: 194 FTSASDVWMFGVCMWEIL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLEKTSNFSDN----FINEVATIGRIHHVNIIHLL 410
+G G +G+V++G + P+ +AV + + SD+ F+ E T+ + H +I+ L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + +I E G L L K +L L A L+ A ++ A+ YL + R
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESK---R 134
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +NVL+ + K+ DFGL++ + + + + + I ++APE N
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESI--NFRR 191
Query: 531 PSGKSDVYSYGMLLLEMI 548
+ SDV+ +G+ + E++
Sbjct: 192 FTSASDVWMFGVCMWEIL 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLEKTSNFSDN----FINEVATIGRIHHVNIIHLL 410
+G G +G+V++G + P+ +AV + + SD+ F+ E T+ + H +I+ L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + +I E G L L K +L L A L+ A ++ A+ YL + R
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESK---R 159
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +NVL+ + K+ DFGL++ + + + + + I ++APE N
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESI--NFRR 216
Query: 531 PSGKSDVYSYGMLLLEMI 548
+ SDV+ +G+ + E++
Sbjct: 217 FTSASDVWMFGVCMWEIL 234
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKTS----NFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K+ E+ + H NI+ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ D L+ E+ P G L L + + A +E +A A+ Y H E ++
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---ELADALHYCH---ERKV 135
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DIKP+N+L+ K++DFG + A S R + GT+ Y+ PE+ +
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC-----GTLDYLPPEMIEGKTHD 190
Query: 531 PSGKSDVYSYGMLLLEMI 548
K D++ G+L E +
Sbjct: 191 --EKVDLWCAGVLCYEFL 206
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKTS----NFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K+ E+ + H NI+ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ D L+ E+ P G L L + + A +E +A A+ Y H E ++
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---ELADALHYCH---ERKV 136
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DIKP+N+L+ K++DFG + A S R + GT+ Y+ PE+ +
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC-----GTLDYLPPEMIEGKTHD 191
Query: 531 PSGKSDVYSYGMLLLEMI 548
K D++ G+L E +
Sbjct: 192 --EKVDLWCAGVLCYEFL 207
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKTS----NFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +GNVY + + + A+KVL K+ E+ + H NI+ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ D L+ E+ P G L L + + A +E +A A+ Y H E ++
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---ELADALHYCH---ERKV 135
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLA-KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DIKP+N+L+ K++DFG + A S R + GT+ Y+ PE+ +
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC-----GTLDYLPPEMIEGKTHD 190
Query: 531 PSGKSDVYSYGMLLLEMI 548
K D++ G+L E +
Sbjct: 191 --EKVDLWCAGVLCYEFL 206
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
+GTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EYMP G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D KV+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 131/291 (45%), Gaps = 50/291 (17%)
Query: 357 LGTGGYGNV-YKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIH-HVNIIHLLGFCC 414
LG G G V ++G F GR VAVK + +F D + E+ + H N+I +C
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCS 95
Query: 415 DGSTRAL-IYEYMPNGSLGDLLSREK---ENLSLK----PARLL-EIALGVAHAIEYLHN 465
+ + R L I + N +L DL+ + ENL L+ P LL +IA GVAH LH+
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH----LHS 151
Query: 466 GCELRILHLDIKPQNVLLDPD--FTPK-----------VSDFGLAKAHSRNRSVV--TMT 510
L+I+H D+KPQN+L+ FT +SDFGL K + +
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKS-DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAY 569
P GT G+ APE+ + +S D++S G + ++ + KH + + SN
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI 268
Query: 570 FPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVV 620
F D++ + E D I++ I +P RP+ +V+
Sbjct: 269 FS---LDEMKCLHDRSLIAEATDLISQ--------MIDHDPLKRPTAMKVL 308
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
+GTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EYMP G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D KV+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 131/291 (45%), Gaps = 50/291 (17%)
Query: 357 LGTGGYGNV-YKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIH-HVNIIHLLGFCC 414
LG G G V ++G F GR VAVK + +F D + E+ + H N+I +C
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCS 95
Query: 415 DGSTRAL-IYEYMPNGSLGDLLSREK---ENLSLK----PARLL-EIALGVAHAIEYLHN 465
+ + R L I + N +L DL+ + ENL L+ P LL +IA GVAH LH+
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH----LHS 151
Query: 466 GCELRILHLDIKPQNVLLDPD--FTPK-----------VSDFGLAKAHSRNRSVV--TMT 510
L+I+H D+KPQN+L+ FT +SDFGL K + +
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKS-DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAY 569
P GT G+ APE+ + +S D++S G + ++ + KH + + SN
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI 268
Query: 570 FPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVV 620
F D++ + E D I++ I +P RP+ +V+
Sbjct: 269 FS---LDEMKCLHDRSLIAEATDLISQ--------MIDHDPLKRPTAMKVL 308
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 338 LSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVL---EKTSNFSDNFINE 394
++ +S D K++ F KL G ++KG++ G + VKVL + ++ S +F E
Sbjct: 1 MNKHSGIDFKQL--NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEE 57
Query: 395 VATIGRIHHVNIIHLLGFCCD--GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEI 452
+ H N++ +LG C LI +MP GSL ++L E N + ++ ++
Sbjct: 58 CPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL-HEGTNFVVDQSQAVKF 116
Query: 453 ALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP 512
AL +A + +LH E I + ++V++D D T ++S +A +S M P
Sbjct: 117 ALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARIS---MADVKFSFQSPGRMYAP 172
Query: 513 RGTIGYIAPEIFMRNLGNPSGKS-DVYSYGMLLLEMI 548
++APE + + + +S D++S+ +LL E++
Sbjct: 173 ----AWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 205
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 25/230 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRI-----HHVNIIHLL 410
LG G +G V+ +F + A+K L+K D+ + R+ H + H+
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM- 83
Query: 411 GFCCDGSTRALIY--EYMPNGSLG-DLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
FC + L + EY+ G L + S K +LS EI LG +++LH+
Sbjct: 84 -FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG----LQFLHSKG 138
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I++ D+K N+LLD D K++DFG+ K + + GT YIAPEI +
Sbjct: 139 ---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC--GTPDYIAPEILLGQ 193
Query: 528 LGNPSGKSDVYSYGMLLLEMI--EEKKHLRPTETTSGS-NTTEAYFPDWI 574
N S D +S+G+LL EM+ + H + E S ++P W+
Sbjct: 194 KYNHS--VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWL 241
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLEKTSNFSDN----FINEVATIGRIHHVNIIHLL 410
+G G +G+V++G + P+ +AV + + SD+ F+ E T+ + H +I+ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + +I E G L L K +L L A L+ A ++ A+ YL + R
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYLESK---R 131
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +NVL+ K+ DFGL++ + + + + + I ++APE N
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESI--NFRR 188
Query: 531 PSGKSDVYSYGMLLLEMI 548
+ SDV+ +G+ + E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 33/245 (13%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG 411
+KLG G Y VYKGK LVA+K LE I EV+ + + H NI+ L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
+ L++EY+ + L L +++ +L L + Y H ++
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQL--LRGLAYCHRQ---KV 121
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT--GPRGTIGYIAPEIFMRNLG 529
LH D+KPQN+L++ K++DFGLA+A +S+ T T T+ Y P+I + +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARA----KSIPTKTYDNEVVTLWYRPPDILLGS-T 176
Query: 530 NPSGKSDVYSYGMLLLEM-----------IEEKKHL------RPTETTSGSNTTEAYFPD 572
+ S + D++ G + EM +EE+ H PTE T + F
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236
Query: 573 WIYDK 577
+ Y K
Sbjct: 237 YNYPK 241
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLE----KTSNFSDNFINEVATIGRIHHVNIIHLL 410
+G G +G+V++G + P+ +AV + + + + F+ E T+ + H +I+ L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + +I E G L L K +L L A L+ A ++ A+ YL + R
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYLESK---R 511
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +NVL+ + K+ DFGL++ + + + + + I ++APE N
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESI--NFRR 568
Query: 531 PSGKSDVYSYGMLLLEMI 548
+ SDV+ +G+ + E++
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 354 KEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
KE +G G Y + + AVKV++K+ I + G+ H NII L
Sbjct: 32 KETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDV 89
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
DG L+ E M G L D + R+K S + A + +G +EYLH+ ++
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIG--KTVEYLHSQG---VV 143
Query: 473 HLDIKPQNVL-LDPDFTP---KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
H D+KP N+L +D P ++ DFG AK R + + MT P T ++APE+ R
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMT-PCYTANFVAPEVLKRQ- 200
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
G G D++S G+LL M+
Sbjct: 201 GYDEG-CDIWSLGILLYTML 219
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 132/295 (44%), Gaps = 54/295 (18%)
Query: 357 LGTGGYGNV-YKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIH-HVNIIHLLGFCC 414
LG G G V ++G F GR VAVK + +F D + E+ + H N+I +C
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCS 77
Query: 415 DGSTRAL-IYEYMPNGSLGDLLSREK---ENLSLK----PARLL-EIALGVAHAIEYLHN 465
+ + R L I + N +L DL+ + ENL L+ P LL +IA GVAH LH+
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH----LHS 133
Query: 466 GCELRILHLDIKPQNVLLDPD--FTPK-----------VSDFGLAKAHSRNRSV--VTMT 510
L+I+H D+KPQN+L+ FT +SDFGL K +S +
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 511 GPRGTIGYIAPEIF-----MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
P GT G+ APE+ ++ + D++S G + ++ + KH + + SN
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250
Query: 566 TEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVV 620
F D++ + E D I++ I +P RP+ +V+
Sbjct: 251 IRGIFS---LDEMKCLHDRSLIAEATDLISQ--------MIDHDPLKRPTAMKVL 294
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY P G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+++D KV+DFGLAK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGLAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 155
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 210
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 211 A--VDWWALGVLIYEM 224
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 25/230 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRI-----HHVNIIHLL 410
LG G +G V+ +F + A+K L+K D+ + R+ H + H+
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM- 84
Query: 411 GFCCDGSTRALIY--EYMPNGSLG-DLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
FC + L + EY+ G L + S K +LS EI LG +++LH+
Sbjct: 85 -FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG----LQFLHSKG 139
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I++ D+K N+LLD D K++DFG+ K + + GT YIAPEI +
Sbjct: 140 ---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC--GTPDYIAPEILLGQ 194
Query: 528 LGNPSGKSDVYSYGMLLLEMI--EEKKHLRPTETTSGS-NTTEAYFPDWI 574
N S D +S+G+LL EM+ + H + E S ++P W+
Sbjct: 195 KYNHS--VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWL 242
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 18/217 (8%)
Query: 357 LGTGGYGNV-YKGKFPDGRLVAVKVLEKTS----NFSDNFINEVATIGRIHHVNIIHLLG 411
+G G +G V K ++ A+K + K N N E+ + + H +++L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D ++ + + G DL ++N+ K + + A++YL N RI
Sbjct: 83 SFQDEEDMFMVVDLLLGG---DLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RI 136
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF-MRNLGN 530
+H D+KP N+LLD ++DF +A R + TM GT Y+APE+F R
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA---GTKPYMAPEMFSSRKGAG 193
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTE 567
S D +S G+ E++ + RP S +++ E
Sbjct: 194 YSFAVDWWSLGVTAYELLRGR---RPYHIRSSTSSKE 227
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 23/203 (11%)
Query: 354 KEKLGTGGYGN----VYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHL 409
KE +G G Y V+K + AVKV++K+ I + G+ H NII L
Sbjct: 32 KETIGVGSYSECKRCVHKATNME---YAVKVIDKSKRDPSEEIEILLRYGQ--HPNIITL 86
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
DG L+ E M G L D + R+K S + A + +G +EYLH+
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIG--KTVEYLHSQG-- 141
Query: 470 RILHLDIKPQNVL-LDPDFTP---KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM 525
++H D+KP N+L +D P ++ DFG AK R + + MT P T ++APE+
Sbjct: 142 -VVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMT-PCYTANFVAPEVLK 198
Query: 526 RNLGNPSGKSDVYSYGMLLLEMI 548
R G G D++S G+LL M+
Sbjct: 199 RQ-GYDEG-CDIWSLGILLYTML 219
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 90/196 (45%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHH-VNIIHLLGF-- 412
LGTG +G V K + G A+K+L+K I RI VN L+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 413 -CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY P G + L R S AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D KV+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLLIDQQGYIKVADFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY P G + L R S AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+++D KV+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 357 LGTGGYGNVYKGKF--PDGRLVAVKVLE----KTSNFSDNFINEVATIGRIHHVNIIHLL 410
+G G +G+V++G + P+ +AV + + + + F+ E T+ + H +I+ L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G + +I E G L L K +L L A L+ A ++ A+ YL + R
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYLESK---R 511
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+H DI +NVL+ K+ DFGL++ + + + + + I ++APE N
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESI--NFRR 568
Query: 531 PSGKSDVYSYGMLLLEMI 548
+ SDV+ +G+ + E++
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
+GTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D KV+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 183
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 238
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 239 A--VDWWALGVLIYEM 252
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 148
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 149 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWTLC----GTPEYLAPEIILSKGYNK 203
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 204 A--VDWWALGVLIYEM 217
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWTLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 357 LGTGGYGNVY--KGKFPDGRLVAVKV-LEKTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
LG GG+G V+ K K D ++ L + + EV + ++ H I+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 414 CDGSTRALIYEYMPNGSLGDLLSR-EKENL-----------SLKPARLLEIALGVAHAIE 461
+ +T + P L + KENL + + L I L +A A+E
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 462 YLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTM----------TG 511
+LH+ ++H D+KP N+ D KV DFGL A ++ T+ TG
Sbjct: 133 FLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 512 PRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
GT Y++PE N + S K D++S G++L E++
Sbjct: 190 QVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFELL 224
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVAT-----IGRIHHVNIIHLL 410
+G G YG V K + D GR+VA+K ++ + D + ++A + ++ H N+++LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDD--DKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 411 GFCCDGSTRALIYEYMPNGSLGDL-LSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
C L++E++ + L DL L + + L +I G+ + HN
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFC--HSHN---- 144
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
I+H DIKP+N+L+ K+ DFG A+ + V T Y APE+ + ++
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV--YDDEVATRWYRAPELLVGDV- 200
Query: 530 NPSGKS-DVYSYGMLLLEMI 548
GK+ DV++ G L+ EM
Sbjct: 201 -KYGKAVDVWAIGCLVTEMF 219
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 356 KLGTGGYGNVYKGKF-PDGRLVAVKVL---EKTSNFSDNFINEVATIGRIHHVNIIHLLG 411
K+G G +G V+K + G+ VA+K + + F + E+ + + H N+++L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 412 FC---------CDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-ARLLEIALGVAHAIE 461
C C GS L++++ + L LLS +L R++++ L + +
Sbjct: 85 ICRTKASPYNRCKGSI-YLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLL---NGLY 139
Query: 462 YLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHS--RNRSVVTMTGPRGTIGYI 519
Y+H +ILH D+K NVL+ D K++DFGLA+A S +N T+ Y
Sbjct: 140 YIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 520 APEIFM--RNLGNPSGKSDVYSYGMLLLEM 547
PE+ + R+ G P D++ G ++ EM
Sbjct: 197 PPELLLGERDYGPP---IDLWGAGCIMAEM 223
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 37/243 (15%)
Query: 357 LGTGGYG--NVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+G+G +G + + K LVAVK +E+ +N E+ + H NI+
Sbjct: 26 IGSGNFGVARLMRDK-QSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 415 DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHL 474
+ A++ EY G L + + S AR L + Y H +++ H
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQL--ISGVSYCH---AMQVCHR 138
Query: 475 DIKPQNVLLDPDFTP--KVSDFGLAKA---HSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
D+K +N LLD P K+ DFG +K+ HS+ +S V GT YIAPE+ ++
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVLLKK-- 190
Query: 530 NPSGK-SDVYSYGMLLLEMI---------EEKKHLRPTETTSGSNTTEAYFPDWIYDKLI 579
GK +DV+S G+ L M+ EE K+ R +T + PD+++ I
Sbjct: 191 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFR--KTIHRILNVQYAIPDYVH---I 245
Query: 580 QPE 582
PE
Sbjct: 246 SPE 248
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY P G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+++D KV+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY P G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+++D +V+DFGLAK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGLAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 373 GRLVAVKVLEKTSN-FSDNFINEV--ATIGRIH-------HVNIIHLLGFCCDGSTRALI 422
G AVK++E T+ S + EV AT H H +II L+ S L+
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 423 YEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVL 482
++ M G L D L+ EK LS K R I + A+ +LH I+H D+KP+N+L
Sbjct: 179 FDLMRKGELFDYLT-EKVALSEKETR--SIMRSLLEAVSFLHAN---NIVHRDLKPENIL 232
Query: 483 LDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF---MRNLGNPSGKS-DVY 538
LD + ++SDFG + + + GT GY+APEI M GK D++
Sbjct: 233 LDDNMQIRLSDFGFSCHLEPGEKLRELC---GTPGYLAPEILKCSMDETHPGYGKEVDLW 289
Query: 539 SYGMLLLEMI 548
+ G++L ++
Sbjct: 290 ACGVILFTLL 299
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 356 KLGTGGYGNVYKGKF-PDGRLVAVKVL---EKTSNFSDNFINEVATIGRIHHVNIIHLLG 411
K+G G +G V+K + G+ VA+K + + F + E+ + + H N+++L+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 412 FC---------CDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-ARLLEIALGVAHAIE 461
C C GS L++++ + L LLS +L R++++ L + +
Sbjct: 84 ICRTKASPYNRCKGSI-YLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLL---NGLY 138
Query: 462 YLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHS--RNRSVVTMTGPRGTIGYI 519
Y+H +ILH D+K NVL+ D K++DFGLA+A S +N T+ Y
Sbjct: 139 YIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 520 APEIFM--RNLGNPSGKSDVYSYGMLLLEM 547
PE+ + R+ G P D++ G ++ EM
Sbjct: 196 PPELLLGERDYGPP---IDLWGAGCIMAEM 222
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 356 KLGTGGYGNVYKGKF-PDGRLVAVKVL---EKTSNFSDNFINEVATIGRIHHVNIIHLLG 411
K+G G +G V+K + G+ VA+K + + F + E+ + + H N+++L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 412 FC---------CDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-ARLLEIALGVAHAIE 461
C C GS L++++ + L LLS +L R++++ L + +
Sbjct: 85 ICRTKASPYNRCKGSI-YLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLL---NGLY 139
Query: 462 YLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHS--RNRSVVTMTGPRGTIGYI 519
Y+H +ILH D+K NVL+ D K++DFGLA+A S +N T+ Y
Sbjct: 140 YIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 520 APEIFM--RNLGNPSGKSDVYSYGMLLLEM 547
PE+ + R+ G P D++ G ++ EM
Sbjct: 197 PPELLLGERDYGPP---IDLWGAGCIMAEM 223
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 37/243 (15%)
Query: 357 LGTGGYG--NVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+G+G +G + + K LVAVK +E+ + N E+ + H NI+
Sbjct: 27 IGSGNFGVARLMRDK-QSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 415 DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHL 474
+ A++ EY G L + + S AR L + Y H +++ H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQL--ISGVSYCH---AMQVCHR 139
Query: 475 DIKPQNVLLDPDFTP--KVSDFGLAKA---HSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
D+K +N LLD P K+ DFG +K+ HS+ +S V GT YIAPE+ ++
Sbjct: 140 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVLLKK-- 191
Query: 530 NPSGK-SDVYSYGMLLLEMI---------EEKKHLRPTETTSGSNTTEAYFPDWIYDKLI 579
GK +DV+S G+ L M+ EE K+ R +T + PD+++ I
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFR--KTIHRILNVQYAIPDYVH---I 246
Query: 580 QPE 582
PE
Sbjct: 247 SPE 249
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 131/295 (44%), Gaps = 54/295 (18%)
Query: 357 LGTGGYGNV-YKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIH-HVNIIHLLGFCC 414
LG G G V ++G F GR VAVK + +F D + E+ + H N+I +C
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCS 77
Query: 415 DGSTRAL-IYEYMPNGSLGDLLSREK---ENLSLK----PARLL-EIALGVAHAIEYLHN 465
+ + R L I + N +L DL+ + ENL L+ P LL +IA GVAH LH+
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH----LHS 133
Query: 466 GCELRILHLDIKPQNVLLDPD--FTPK-----------VSDFGLAKAHSRNRSVV--TMT 510
L+I+H D+KPQN+L+ FT +SDFGL K + +
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 511 GPRGTIGYIAPEIF-----MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
P GT G+ APE+ ++ + D++S G + ++ + KH + + SN
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250
Query: 566 TEAYFPDWIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVV 620
F D++ + E D I++ I +P RP+ +V+
Sbjct: 251 IRGIFS---LDEMKCLHDRSLIAEATDLISQ--------MIDHDPLKRPTAMKVL 294
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 24/198 (12%)
Query: 355 EKLGTGGYGNVYK--GKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
E+LGTG +G V++ + A V+ + + E+ T+ + H +++L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
D + +IYE+M G L + ++ E +S A +E V + ++H E +
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA--VEYMRQVCKGLCHMH---ENNYV 171
Query: 473 HLDIKPQNVLLDPDFTPKVS------DFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
HLD+KP+N++ FT K S DFGL AH + V +T GT + APE+
Sbjct: 172 HLDLKPENIM----FTTKRSNELKLIDFGLT-AHLDPKQSVKVTT--GTAEFAAPEVAE- 223
Query: 527 NLGNPSG-KSDVYSYGML 543
G P G +D++S G+L
Sbjct: 224 --GKPVGYYTDMWSVGVL 239
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 24/198 (12%)
Query: 355 EKLGTGGYGNVYK--GKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
E+LGTG +G V++ + A V+ + + E+ T+ + H +++L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
D + +IYE+M G L + ++ E +S A +E V + ++H E +
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA--VEYMRQVCKGLCHMH---ENNYV 277
Query: 473 HLDIKPQNVLLDPDFTPKVS------DFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
HLD+KP+N++ FT K S DFGL AH + V +T GT + APE+
Sbjct: 278 HLDLKPENIM----FTTKRSNELKLIDFGLT-AHLDPKQSVKVT--TGTAEFAAPEVAE- 329
Query: 527 NLGNPSG-KSDVYSYGML 543
G P G +D++S G+L
Sbjct: 330 --GKPVGYYTDMWSVGVL 345
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L FC + +Y + G+LL ++ S + A+EYLH
Sbjct: 101 KLY-FCFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 158 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 215 SACKS--SDLWALGCIIYQLV 233
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R AR A + EYLH+ L +
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFY--AAQIVLTFEYLHS---LDL 155
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 210
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 211 A--VDWWALGVLIYEM 224
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 353 FKEKLGTGGYGNV-YKGKFPDGRLVAVKV----LEKTSNFSDNFINEVATIGRIHHVNII 407
+E LG G +G V + + VA+K L K S+ E++ + + H +II
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L + ++ EY G L D + +K + R + + AIEY H
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQ---QIICAIEYCHRH- 127
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
+I+H D+KP+N+LLD + K++DFGL+ + + T G+ Y APE+
Sbjct: 128 --KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVINGK 182
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
L + DV+S G++L M+
Sbjct: 183 L-YAGPEVDVWSCGIVLYVML 202
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 23/201 (11%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEA--TEFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPAFVAPE 187
Query: 523 IFMRNLGNPSGKSDVYSYGML 543
I N ++D++S G++
Sbjct: 188 IV--NYEPLGLEADMWSIGVI 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG L + R+ + R + A+EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTAE--IVSALEYLHGKG 152
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
+ S SD+++ G ++ +++
Sbjct: 210 --SASKSSDLWALGCIIYQLV 228
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY P G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+++D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 18/193 (9%)
Query: 356 KLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+LG G VY+ K + A+KVL+KT + E+ + R+ H NII L
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 415 DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH-NGCELRILH 473
+ +L+ E + G L D + EK S + A + + A+ YLH NG I+H
Sbjct: 119 TPTEISLVLELVTGGELFDRIV-EKGYYSERDAA--DAVKQILEAVAYLHENG----IVH 171
Query: 474 LDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
D+KP+N+L PD K++DFGL+K V M GT GY APEI
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ---VLMKTVCGTPGYCAPEILRGCAYG 228
Query: 531 PSGKSDVYSYGML 543
P + D++S G++
Sbjct: 229 P--EVDMWSVGII 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLA----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +G V G+ VA+K++ K S+ E++ + + H +II L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
++ EY N ++ R+K +S + AR + A+EY H +I
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEAR--RFFQQIISAVEYCHRH---KI 133
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP+N+LLD K++DFGL+ + + T G+ Y APE+ L
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKL-YA 189
Query: 532 SGKSDVYSYGMLLLEMI 548
+ DV+S G++L M+
Sbjct: 190 GPEVDVWSCGVILYVML 206
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLX----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 208 SACKS--SDLWALGCIIYQLV 226
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +G V G+ VA+K++ K S+ E++ + + H +II L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
++ EY N ++ R+K +S + AR + A+EY H +I
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEAR--RFFQQIISAVEYCHRH---KI 134
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP+N+LLD K++DFGL+ + + T G+ Y APE+ L
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKL-YA 190
Query: 532 SGKSDVYSYGMLLLEMI 548
+ DV+S G++L M+
Sbjct: 191 GPEVDVWSCGVILYVML 207
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ + L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY P G + L R S AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+++D KV+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFXEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +G V G+ VA+K++ K S+ E++ + + H +II L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
++ EY N ++ R+K +S + AR + A+EY H +I
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEAR--RFFQQIISAVEYCHRH---KI 124
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP+N+LLD K++DFGL+ + + T G+ Y APE+ L
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKL-YA 180
Query: 532 SGKSDVYSYGMLLLEMI 548
+ DV+S G++L M+
Sbjct: 181 GPEVDVWSCGVILYVML 197
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 37/224 (16%)
Query: 350 TNGF------KEKLGTGGYGNVYKGKF-PDGRLVAVKVLEKTS--NFSDNFINEV--ATI 398
T+GF KE LG G V + P + AVK+++ T +FS + E+ AT+
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 399 GRIH-------HVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLE 451
+ H NII L + L+++ M G L D L+ EK LS K R +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-EKVTLSEKETR--K 128
Query: 452 IALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLA---KAHSRNRSVVT 508
I + I LH +L I+H D+KP+N+LLD D K++DFG + + RSV
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC- 184
Query: 509 MTGPRGTIGYIAPEIF--MRNLGNPS-GKS-DVYSYGMLLLEMI 548
GT Y+APEI N +P GK D++S G+++ ++
Sbjct: 185 -----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG G +G V G+ VA+K++ K S+ E++ + + H +II L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
++ EY N ++ R+K +S + AR + A+EY H +I
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEAR--RFFQQIISAVEYCHRH---KI 128
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP+N+LLD K++DFGL+ + + T G+ Y APE+ L
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKL-YA 184
Query: 532 SGKSDVYSYGMLLLEMI 548
+ DV+S G++L M+
Sbjct: 185 GPEVDVWSCGVILYVML 201
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ + L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY P G + L R S AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+++D KV+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFXEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 348 KMTNGF--KEKLGTGGYGNVYKGKFPDGRL-VAVKVLEKTSNFSDNFINEVATIGRIHHV 404
+ T+G+ KE +G G Y + + AVK+++K+ I + G+ H
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQ--HP 76
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
NII L DG ++ E M G L D + R+K + + +L + +EYLH
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL---FTITKTVEYLH 133
Query: 465 NGCELRILHLDIKPQNVL-LDPDFTP---KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIA 520
++H D+KP N+L +D P ++ DFG AK R + + MT P T ++A
Sbjct: 134 AQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLMT-PCYTANFVA 188
Query: 521 PEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
PE+ R D++S G+LL M+
Sbjct: 189 PEVLERQ--GYDAACDIWSLGVLLYTML 214
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+P G + L R AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFXEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY P G + L R AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFXEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+++D KV+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 23/201 (11%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEA--TEFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 187
Query: 523 IFMRNLGNPSGKSDVYSYGML 543
I N ++D++S G++
Sbjct: 188 IV--NYEPLGLEADMWSIGVI 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 150 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 207 SACKS--SDLWALGCIIYQLV 225
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 210 SAXKS--SDLWALGCIIYQLV 228
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 129 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 186 SACKS--SDLWALGCIIYQLV 204
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 70
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 128 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 185 SACKS--SDLWALGCIIYQLV 203
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 28/249 (11%)
Query: 360 GGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTR 419
G +G V+K + + VAVK+ S E+ + + H N++ + GS
Sbjct: 26 GRFGCVWKAQLMND-FVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNL 84
Query: 420 A----LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN--------GC 467
LI + GSL D L K N+ + L +A ++ + YLH G
Sbjct: 85 EVELWLITAFHDKGSLTDYL---KGNI-ITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
+ I H D K +NVLL D T ++DFGLA + G GT Y+APE+
Sbjct: 141 KPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGA 200
Query: 528 LG---NPSGKSDVYSYGMLLLEMIEEKK--------HLRPTETTSGSNTTEAYFPDWIYD 576
+ + + D+Y+ G++L E++ K ++ P E G + + + +
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEVVVH 260
Query: 577 KLIQPEKED 585
K ++P +D
Sbjct: 261 KKMRPTIKD 269
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 21/226 (9%)
Query: 333 YRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL---VAVKVLEKTSN--- 386
YR L N + ++ + G + +G+G YG+V D RL VAVK L +
Sbjct: 15 YRQEL--NKTVWEVPQRLQGLR-PVGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLI 69
Query: 387 FSDNFINEVATIGRIHHVNIIHLLG-FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLK 445
+ E+ + + H N+I LL F S Y+ +G L+ ++ +L
Sbjct: 70 HARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALS 129
Query: 446 PARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRS 505
+ + + ++Y+H+ I+H D+KP NV ++ D ++ DFGLA+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE-- 184
Query: 506 VVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEK 551
MTG T Y APEI M N + + D++S G ++ E+++ K
Sbjct: 185 ---MTGYVATRWYRAPEI-MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 73
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 130
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 131 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 188 SACKS--SDLWALGCIIYQLV 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 72
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 129
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 130 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 187 SACKS--SDLWALGCIIYQLV 205
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 154 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 211 SACKS--SDLWALGCIIYQLV 229
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 356 KLGTGGYGNVYKGKF-PDGRLVAVKVL---EKTSNFSDNFINEVATIGRIHHVNIIHLLG 411
K+G G +G V+K + G+ VA+K + + F + E+ + + H N+++L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 412 FC---------CDGSTRALIYEYMPNGSLGDLLSREKENLSLKP-ARLLEIALGVAHAIE 461
C C S L++++ + L LLS +L R++++ L + +
Sbjct: 85 ICRTKASPYNRCKASI-YLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLL---NGLY 139
Query: 462 YLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHS--RNRSVVTMTGPRGTIGYI 519
Y+H +ILH D+K NVL+ D K++DFGLA+A S +N T+ Y
Sbjct: 140 YIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 520 APEIFM--RNLGNPSGKSDVYSYGMLLLEM 547
PE+ + R+ G P D++ G ++ EM
Sbjct: 197 PPELLLGERDYGPP---IDLWGAGCIMAEM 223
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 149
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 150 IYRDLKPENLLIDEQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 204
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 205 A--VDWWALGVLIYEM 218
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 77
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 135 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 192 SACKS--SDLWALGCIIYQLV 210
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 208 SACKS--SDLWALGCIIYQLV 226
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 208 SACKS--SDLWALGCIIYQLV 226
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 210 SACKS--SDLWALGCIIYQLV 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 210 SACKS--SDLWALGCIIYQLV 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 150 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 207 SACKS--SDLWALGCIIYQLV 225
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 210 SACKS--SDLWALGCIIYQLV 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 210 SACKS--SDLWALGCIIYQLV 228
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEA--TEFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 187
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 188 IVNY---EPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEA--TEFLKQILNGVYYLHS- 131
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 132 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 186
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 187 IVNY---EPLGLEADMWSIGVI 205
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEAT--EFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 187
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 188 IVNY---EPLGLEADMWSIGVI 206
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEAT--EFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 187
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 188 IVNY---EPLGLEADMWSIGVI 206
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 154 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 211 SACKS--SDLWALGCIIYQLV 229
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEA--TEFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 187
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 188 IVNY---EPLGLEADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEA--TEFLKQILNGVYYLHS- 131
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 132 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 186
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 187 IVNY---EPLGLEADMWSIGVI 205
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 357 LGTGGYGNVY----KGKFPDGRLVAVKVLEKTSNFSDNFIN----EVATIGRIHHVNIIH 408
LG G +G V KG L A+K+L+K D+ + E + + +
Sbjct: 27 LGKGSFGKVMLADRKGT---EELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 409 LLGFCCDGSTRA-LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L C R + EY+ NG GDL+ ++ K + + A ++ + +LH
Sbjct: 84 QLHSCFQTVDRLYFVMEYV-NG--GDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I++ D+K NV+LD + K++DFG+ K H + VT GT YIAPEI
Sbjct: 141 ---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG--VTTREFCGTPDYIAPEIIAY- 194
Query: 528 LGNPSGKS-DVYSYGMLLLEMI 548
P GKS D ++YG+LL EM+
Sbjct: 195 --QPYGKSVDWWAYGVLLYEML 214
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 156 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 213 SACKS--SDLWALGCIIYQLV 231
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 356 KLGTGGYGNVYKG-KFPDGRLVAVKVL---EKTSNFSDNFINEVATIGRIHHVNIIHLLG 411
KLG G YG VYK VA+K + + I EV+ + + H NII L
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
LI+EY N DL +N + + + + + + H+ R
Sbjct: 101 VIHHNHRLHLIFEYAEN----DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RC 153
Query: 472 LHLDIKPQNVLL---DPDFTP--KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
LH D+KPQN+LL D TP K+ DFGLA+A + T T+ Y PEI +
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPPEILLG 211
Query: 527 NLGNPSGKSDVYSYGMLLLEMI 548
+ + S D++S + EM+
Sbjct: 212 S-RHYSTSVDIWSIACIWAEML 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 355 EKLGTGGYGNVYKGKFPDGRL---VAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIH 408
+ +G+G YG V DGR VA+K L + + F+ E+ + + H N+I
Sbjct: 31 QPVGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIG 88
Query: 409 LLG-FCCDGSTRAL--IYEYMP--NGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
LL F D + Y MP LG L+ EK L R+ + + + Y+
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK----LGEDRIQFLVYQMLKGLRYI 144
Query: 464 HNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEI 523
H I+H D+KP N+ ++ D K+ DFGLA+ M G T Y APE+
Sbjct: 145 HAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEV 196
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEK 551
+ N + D++S G ++ EMI K
Sbjct: 197 IL-NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 107/243 (44%), Gaps = 37/243 (15%)
Query: 357 LGTGGYG--NVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+G+G +G + + K LVAVK +E+ +N E+ + H NI+
Sbjct: 27 IGSGNFGVARLMRDK-QSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 415 DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHL 474
+ A++ EY G L + + S AR L + Y H +++ H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQL--ISGVSYCH---AMQVCHR 139
Query: 475 DIKPQNVLLDPDFTP--KVSDFGLAKA---HSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
D+K +N LLD P K+ FG +K+ HS+ +S V GT YIAPE+ ++
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV------GTPAYIAPEVLLKK-- 191
Query: 530 NPSGK-SDVYSYGMLLLEMI---------EEKKHLRPTETTSGSNTTEAYFPDWIYDKLI 579
GK +DV+S G+ L M+ EE K+ R +T + PD+++ I
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFR--KTIHRILNVQYAIPDYVH---I 246
Query: 580 QPE 582
PE
Sbjct: 247 SPE 249
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEAT--EFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 187
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 188 IVNY---EPLGLEADMWSIGVI 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 30/196 (15%)
Query: 371 PDGRLVAVKVLEKTS--NFSDNFINEV--ATIGRIH-------HVNIIHLLGFCCDGSTR 419
P + AVK+++ T +FS + E+ AT+ + H NII L +
Sbjct: 27 PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF 86
Query: 420 ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQ 479
L+++ M G L D L+ EK LS K R +I + I LH +L I+H D+KP+
Sbjct: 87 FLVFDLMKKGELFDYLT-EKVTLSEKETR--KIMRALLEVICALH---KLNIVHRDLKPE 140
Query: 480 NVLLDPDFTPKVSDFGLA---KAHSRNRSVVTMTGPRGTIGYIAPEIF--MRNLGNPS-G 533
N+LLD D K++DFG + + R V GT Y+APEI N +P G
Sbjct: 141 NILLDDDMNIKLTDFGFSCQLDPGEKLREVC------GTPSYLAPEIIECSMNDNHPGYG 194
Query: 534 KS-DVYSYGMLLLEMI 548
K D++S G+++ ++
Sbjct: 195 KEVDMWSTGVIMYTLL 210
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 36/277 (12%)
Query: 357 LGTGGYGNVYKGKFP--DGRLV--AVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHL 409
LG G +G+V + + DG V AVK+L+ S+ + F+ E A + H ++ L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 410 LGFCCDGSTRA------LIYEYMPNGSLGDLL--SREKEN-LSLKPARLLEIALGVAHAI 460
+G + +I +M +G L L SR EN +L L+ + +A +
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 461 EYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIA 520
EYL + +H D+ +N +L D T V+DFGL++ + + ++A
Sbjct: 151 EYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 521 PEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQ 580
E NL + SDV+++G+ + E++ R +G E Y ++L Q
Sbjct: 208 LESLADNLY--TVHSDVWAFGVTMWEIMT-----RGQTPYAGIENAEIYNYLIGGNRLKQ 260
Query: 581 PEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMT 617
P + +EE D + + C +PK RPS T
Sbjct: 261 P--PECMEEVYDLMYQ--------CWSADPKQRPSFT 287
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 107/224 (47%), Gaps = 37/224 (16%)
Query: 350 TNGF------KEKLGTGGYGNVYKGKF-PDGRLVAVKVLEKTS--NFSDNFINEV--ATI 398
T+GF KE LG G V + P + AVK+++ T +FS + E+ AT+
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 399 GRIH-------HVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLE 451
+ H NII L + L+++ M G L D L+ EK LS K R +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-EKVTLSEKETR--K 128
Query: 452 IALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLA---KAHSRNRSVVT 508
I + I LH +L I+H D+KP+N+LLD D K++DFG + + R V
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC- 184
Query: 509 MTGPRGTIGYIAPEIF--MRNLGNPS-GKS-DVYSYGMLLLEMI 548
GT Y+APEI N +P GK D++S G+++ ++
Sbjct: 185 -----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R + AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFAEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 353 FKEKLGTGGYGN-VYKGKFPDGRLVAVKVLEKTSNFSDNFI----NEVATIGRIHHVNII 407
F + LG G + V + R A+K+LEK +N + E + R+ H +
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
L D Y NG +LL ++ S + A+EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I+H D+KP+N+LL+ D +++DFG AK S GT Y++PE+
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 528 LGNPSGKSDVYSYGMLLLEMI 548
S SD+++ G ++ +++
Sbjct: 208 SACKS--SDLWALGCIIYQLV 226
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEAT--EFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 187
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 188 IVNY---EPLGLEADMWSIGVI 206
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEAT--EFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 187
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 188 IVNY---EPLGLEADMWSIGVI 206
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEA--TEFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 187
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 188 IVNY---EPLGLEADMWSIGVI 206
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ +M
Sbjct: 218 A--VDWWALGVLIYQM 231
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEAT--EFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 187
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 188 IVNY---EPLGLEADMWSIGVI 206
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 333 YRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL---VAVKVLEKTSN--- 386
YR L N + ++ + G + +G+G YG+V D RL VAVK L +
Sbjct: 7 YRQEL--NKTVWEVPQRLQGLR-PVGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLI 61
Query: 387 FSDNFINEVATIGRIHHVNIIHLLG-FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLK 445
+ E+ + + H N+I LL F S Y+ +G L+ + +L
Sbjct: 62 HARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALS 121
Query: 446 PARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRS 505
+ + + ++Y+H+ I+H D+KP NV ++ D ++ DFGLA+
Sbjct: 122 DEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEE-- 176
Query: 506 VVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEK 551
MTG T Y APEI M N + + D++S G ++ E+++ K
Sbjct: 177 ---MTGYVATRWYRAPEI-MLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+++D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLIIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIIISKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ + L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY P G + L R AR A + EYLH+ L +
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFXEPHARFY--AAQIVLTFEYLHS---LDL 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+++D KV+DFG AK + R+ GT Y+APEI + N
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 219 A--VDWWALGVLIYEM 232
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 183
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + T+ GT Y+APEI + N
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGATWTLC---GTPEYLAPEIILSKGYNK 238
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 239 A--VDWWALGVLIYEM 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 340 NYSY-NDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATI 398
+Y Y ++ MT+ + +LG G +G V++ K + + K + E+
Sbjct: 64 DYEYREEVHWMTH--QPRLGRGSFGEVHRMK---DKQTGFQCAVKKVRLEVFRVEELVAC 118
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
+ I+ L G +G + E + GSLG L+ K+ L R L
Sbjct: 119 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALE 175
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFT-PKVSDFGLA---KAHSRNRSVVTMTGPRG 514
+EYLH RILH D+K NVLL D + + DFG A + +S++T G
Sbjct: 176 GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 515 TIGYIAPEIFMRNLGNP-SGKSDVYSYGMLLLEMI 548
T ++APE+ M G P K D++S ++L M+
Sbjct: 233 TETHMAPEVVM---GKPCDAKVDIWSSCCMMLHML 264
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 357 LGTGGYGNVYKGK----FPDGRLVAVKVLEKTS-----NFSDNFINEVATIGRIHHVNII 407
LGTG YG V+ + G+L A+KVL+K + +++ E + I +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 408 HLLGFCCDGSTR-ALIYEYMPNGSLGDLLSREKENLSLKPARLL--EIALGVAHAIEYLH 464
L + T+ LI +Y+ G L LS ++E + ++ EI L A+E+LH
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLS-QRERFTEHEVQIYVGEIVL----ALEHLH 176
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+L I++ DIK +N+LLD + ++DFGL+K + + GTI Y+AP+I
Sbjct: 177 ---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC-GTIEYMAPDIV 232
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMI 548
D +S G+L+ E++
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELL 256
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 355 EKLGTGGYGNVYKGKFPDGR---LVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHL 409
E++G G +G V+KG D R +VA+K+ LE+ + ++ E+ + + +
Sbjct: 29 ERIGKGSFGEVFKG--IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKY 86
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
G GS +I EY+ GS DLL + L EI G ++YLH+
Sbjct: 87 YGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKG----LDYLHSE--- 139
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
+ +H DIK NVLL K++DFG+A + + + GT ++APE+ ++
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIQQSAY 197
Query: 530 NPSGKSDVYSYGMLLLEM 547
+ K+D++S G+ +E+
Sbjct: 198 D--SKADIWSLGITAIEL 213
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 333 YRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRL---VAVKVLEKTSN--- 386
YR L N + ++ + G + +G+G YG+V D RL VAVK L +
Sbjct: 15 YRQEL--NKTVWEVPQRLQGLR-PVGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLI 69
Query: 387 FSDNFINEVATIGRIHHVNIIHLLG-FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLK 445
+ E+ + + H N+I LL F S Y+ +G L+ + +L
Sbjct: 70 HARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALS 129
Query: 446 PARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRS 505
+ + + ++Y+H+ I+H D+KP NV ++ D ++ DFGLA+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE-- 184
Query: 506 VVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEK 551
MTG T Y APEI M N + + D++S G ++ E+++ K
Sbjct: 185 ---MTGYVATRWYRAPEI-MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R AR A + EYLH+ L +
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFY--AAQIVLTFEYLHS---LDL 157
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 158 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 212
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 213 A--VDWWALGVLIYEM 226
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 357 LGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVN---IIHLLGF 412
LG G +G V K GR A+K+L+K + + + T R+ + + L +
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 218
Query: 413 CCDGSTR-ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
R + EY G L LSRE+ S AR + A++YLH+ E +
Sbjct: 219 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFY--GAEIVSALDYLHS--EKNV 273
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+K +N++LD D K++DFGL K ++ + TM GT Y+APE+ N
Sbjct: 274 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLE---DND 328
Query: 532 SGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 329 YGRAVDWWGLGVVMYEMM 346
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K S ++ EV+ + I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ + A E + + + YLH+
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLA-EKESLTEEEA--TEFLKQILNGVYYLHS- 132
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
L+I H D+KP+N++L P K+ DFGLA + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPE 187
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 188 IVNY---EPLGLEADMWSIGVI 206
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 357 LGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVN---IIHLLGF 412
LG G +G V K GR A+K+L+K + + + T R+ + + L +
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 413 CCDGSTR-ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
R + EY G L LSRE+ S AR + A++YLH+ E +
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFY--GAEIVSALDYLHS--EKNV 270
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+K +N++LD D K++DFGL K ++ + TM GT Y+APE+ N
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLE---DND 325
Query: 532 SGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 326 YGRAVDWWGLGVVMYEMM 343
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 37/258 (14%)
Query: 349 MTNGFK--EKLGTGGYGNVYK-GKFPDGRLVAVKVL--EKTSNFSDNFINEVATIGRI-H 402
MT+ ++ E+LG G + V + K P G+ A K++ +K S + A I R+
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 403 HVNIIHLLGFCCDGSTRALIYEYMPNGSL-GDLLSREKENLSLKPARLLEIALGVAHAIE 461
H NI+ L + L+++ + G L D+++RE + + + +I V H
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH--- 118
Query: 462 YLHNGCELR-ILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIG 517
C L I+H D+KP+N+LL K++DFGLA ++ G GT G
Sbjct: 119 -----CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPG 171
Query: 518 YIAPEIFMRNLGNPSGKS-DVYSYGMLLLEMI-------EEKKHLRPTETTSGSNTTEAY 569
Y++PE+ + +P GK D+++ G++L ++ +E +H + +G+ +
Sbjct: 172 YLSPEVLRK---DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS- 227
Query: 570 FPDWIYDKLIQPEKEDFV 587
P+W + PE +D +
Sbjct: 228 -PEW---DTVTPEAKDLI 241
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 37/258 (14%)
Query: 349 MTNGFK--EKLGTGGYGNVYK-GKFPDGRLVAVKVL--EKTSNFSDNFINEVATIGRI-H 402
MT+ ++ E+LG G + V + K P G+ A K++ +K S + A I R+
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 403 HVNIIHLLGFCCDGSTRALIYEYMPNGSL-GDLLSREKENLSLKPARLLEIALGVAHAIE 461
H NI+ L + L+++ + G L D+++RE + + + +I V H
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH--- 118
Query: 462 YLHNGCELR-ILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIG 517
C L I+H D+KP+N+LL K++DFGLA ++ G GT G
Sbjct: 119 -----CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPG 171
Query: 518 YIAPEIFMRNLGNPSGKS-DVYSYGMLLLEMI-------EEKKHLRPTETTSGSNTTEAY 569
Y++PE+ + +P GK D+++ G++L ++ +E +H + +G+ +
Sbjct: 172 YLSPEVLRK---DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS- 227
Query: 570 FPDWIYDKLIQPEKEDFV 587
P+W + PE +D +
Sbjct: 228 -PEW---DTVTPEAKDLI 241
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 25/244 (10%)
Query: 316 ERQNIGDGLNVKQFIKTYRSALLSNYSYNDIKKMTN-GFKEKLGTGGYGNVY----KGKF 370
ER IG G + + N D K+T+ F LG G +G V KG
Sbjct: 307 ERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGT- 365
Query: 371 PDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVN----IIHLLGFCCDGSTRA-LIYEY 425
L AVK+L+K D+ + R+ + + L C R + EY
Sbjct: 366 --DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEY 423
Query: 426 MPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDP 485
+ NG GDL+ ++ K + A +A + +L + I++ D+K NV+LD
Sbjct: 424 V-NG--GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDS 477
Query: 486 DFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS-DVYSYGMLL 544
+ K++DFG+ K + + VT GT YIAPEI P GKS D +++G+LL
Sbjct: 478 EGHIKIADFGMCKENIWDG--VTTKXFCGTPDYIAPEIIAY---QPYGKSVDWWAFGVLL 532
Query: 545 LEMI 548
EM+
Sbjct: 533 YEML 536
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R AR A + EYLH+ L +
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFY--AAQIVLTFEYLHS---LDL 183
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+APEI + N
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPEIILSKGYNK 238
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 239 A--VDWWALGVLIYEM 252
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 340 NYSY-NDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATI 398
+Y Y ++ MT+ + ++G G +G V++ K + + K + E+
Sbjct: 50 DYEYREEVHWMTH--QPRVGRGSFGEVHRMK---DKQTGFQCAVKKVRLEVFRVEELVAC 104
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
+ I+ L G +G + E + GSLG L+ K+ L R L
Sbjct: 105 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALE 161
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFT-PKVSDFGLA---KAHSRNRSVVTMTGPRG 514
+EYLH RILH D+K NVLL D + + DFG A + +S++T G
Sbjct: 162 GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 515 TIGYIAPEIFMRNLGNP-SGKSDVYSYGMLLLEMI 548
T ++APE+ M G P K D++S ++L M+
Sbjct: 219 TETHMAPEVVM---GKPCDAKVDIWSSCCMMLHML 250
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 356 KLGTGGYGNVYK-GKFPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG- 411
+LG G G V+K P G ++A K+ LE + I E+ + + I+ G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
F DG ++ E+M GSL +L + P ++L ++++ V + YL + +
Sbjct: 73 FYSDGEI-SICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE--KHK 125
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKA--HSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
I+H D+KP N+L++ K+ DFG++ S S V GT Y++PE
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT- 178
Query: 529 GNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYF 570
+ S +SD++S G+ L+EM + + P + S A F
Sbjct: 179 -HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF 219
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 357 LGTGGYG--NVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+G+G +G + + K LVAVK +E+ +N E+ + H NI+
Sbjct: 27 IGSGNFGVARLMRDK-QSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 415 DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHL 474
+ A++ EY G L + + S AR L + Y H +++ H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQL--ISGVSYCH---AMQVCHR 139
Query: 475 DIKPQNVLLDPDFTP--KVSDFGLAKA---HSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
D+K +N LLD P K+ FG +K+ HS+ + V GT YIAPE+ ++
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV------GTPAYIAPEVLLKK-- 191
Query: 530 NPSGK-SDVYSYGMLLLEMI---------EEKKHLRPTETTSGSNTTEAYFPDWIYDKLI 579
GK +DV+S G+ L M+ EE K+ R +T + PD+++ I
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFR--KTIHRILNVQYAIPDYVH---I 246
Query: 580 QPE 582
PE
Sbjct: 247 SPE 249
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ GT Y+AP I + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLC----GTPEYLAPAIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 357 LGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVN---IIHLLGF 412
LG G +G V K GR A+K+L+K + + + T R+ + + L +
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 413 CCDGSTR-ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
R + EY G L LSRE+ S AR + A++YLH+ E +
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARF--YGAEIVSALDYLHS--EKNV 130
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+K +N++LD D K++DFGL K ++ + TM GT Y+APE+ N
Sbjct: 131 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTPEYLAPEVLE---DND 185
Query: 532 SGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 186 YGRAVDWWGLGVVMYEMM 203
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 357 LGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVN---IIHLLGF 412
LG G +G V K GR A+K+L+K + + + T R+ + + L +
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 413 CCDGSTR-ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
R + EY G L LSRE+ S AR + A++YLH+ E +
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFY--GAEIVSALDYLHS--EKNV 131
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+K +N++LD D K++DFGL K ++ + TM GT Y+APE+ N
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTPEYLAPEVLE---DND 186
Query: 532 SGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 187 YGRAVDWWGLGVVMYEMM 204
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 357 LGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVN---IIHLLGF 412
LG G +G V K GR A+K+L+K + + + T R+ + + L +
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 77
Query: 413 CCDGSTR-ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
R + EY G L LSRE+ S AR + A++YLH+ E +
Sbjct: 78 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFY--GAEIVSALDYLHS--EKNV 132
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+K +N++LD D K++DFGL K ++ + TM GT Y+APE+ N
Sbjct: 133 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTPEYLAPEVLE---DND 187
Query: 532 SGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 188 YGRAVDWWGLGVVMYEMM 205
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 450 LEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNR----- 504
L I + +A A+E+LH+ ++H D+KP N+ D KV DFGL A ++
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 505 -----SVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
+ T G GT Y++PE N N S K D++S G++L E++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFELL 270
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 29/273 (10%)
Query: 302 RKRIPSFFKKPFSEERQNIGDGLNVKQFI---KTYRSALLSNYSYNDIKKMTNGF--KEK 356
+K++P +P+ EE G ++FI K R N N I N F
Sbjct: 138 KKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELN-IHLTMNDFSVHRI 196
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEK---------TSNFSDNFINEVATIGRIHHVNI 406
+G GG+G VY + D G++ A+K L+K T ++ + + + G +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
+ D + I + M NG GDL ++ A + A + +E++HN
Sbjct: 257 MSYAFHTPD--KLSFILDLM-NG--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
+++ D+KP N+LLD ++SD GLA S+ + ++ GT GY+APE+ +
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQK 364
Query: 527 NLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTET 559
+ S +D +S G +L +++ R +T
Sbjct: 365 GVAYDSS-ADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 29/273 (10%)
Query: 302 RKRIPSFFKKPFSEERQNIGDGLNVKQFI---KTYRSALLSNYSYNDIKKMTNGF--KEK 356
+K++P +P+ EE G ++FI K R N N I N F
Sbjct: 138 KKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELN-IHLTMNDFSVHRI 196
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEK---------TSNFSDNFINEVATIGRIHHVNI 406
+G GG+G VY + D G++ A+K L+K T ++ + + + G +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
+ D + I + M NG GDL ++ A + A + +E++HN
Sbjct: 257 MSYAFHTPD--KLSFILDLM-NG--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
+++ D+KP N+LLD ++SD GLA S+ + ++ GT GY+APE+ +
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQK 364
Query: 527 NLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTET 559
+ S +D +S G +L +++ R +T
Sbjct: 365 GVAYDSS-ADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 29/273 (10%)
Query: 302 RKRIPSFFKKPFSEERQNIGDGLNVKQFI---KTYRSALLSNYSYNDIKKMTNGF--KEK 356
+K++P +P+ EE G ++FI K R N N I N F
Sbjct: 138 KKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELN-IHLTMNDFSVHRI 196
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEK---------TSNFSDNFINEVATIGRIHHVNI 406
+G GG+G VY + D G++ A+K L+K T ++ + + + G +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
+ D + I + M NG GDL ++ A + A + +E++HN
Sbjct: 257 MSYAFHTPD--KLSFILDLM-NG--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
+++ D+KP N+LLD ++SD GLA S+ + ++ GT GY+APE+ +
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQK 364
Query: 527 NLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTET 559
+ S +D +S G +L +++ R +T
Sbjct: 365 GVAYDSS-ADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 340 NYSY-NDIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATI 398
+Y Y ++ MT+ + ++G G +G V++ K + + K + E+
Sbjct: 66 DYEYREEVHWMTH--QPRVGRGSFGEVHRMK---DKQTGFQCAVKKVRLEVFRVEELVAC 120
Query: 399 GRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAH 458
+ I+ L G +G + E + GSLG L+ K+ L R L
Sbjct: 121 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALE 177
Query: 459 AIEYLHNGCELRILHLDIKPQNVLLDPDFT-PKVSDFGLA---KAHSRNRSVVTMTGPRG 514
+EYLH RILH D+K NVLL D + + DFG A + +S++T G
Sbjct: 178 GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 515 TIGYIAPEIFMRNLGNP-SGKSDVYSYGMLLLEMI 548
T ++APE+ M G P K D++S ++L M+
Sbjct: 235 TETHMAPEVVM---GKPCDAKVDIWSSCCMMLHML 266
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 29/273 (10%)
Query: 302 RKRIPSFFKKPFSEERQNIGDGLNVKQFI---KTYRSALLSNYSYNDIKKMTNGF--KEK 356
+K++P +P+ EE G ++FI K R N N I N F
Sbjct: 137 KKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELN-IHLTMNDFSVHRI 195
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEK---------TSNFSDNFINEVATIGRIHHVNI 406
+G GG+G VY + D G++ A+K L+K T ++ + + + G +
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
+ D + I + M NG GDL ++ A + A + +E++HN
Sbjct: 256 MSYAFHTPD--KLSFILDLM-NG--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 310
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
+++ D+KP N+LLD ++SD GLA S+ + ++ GT GY+APE+ +
Sbjct: 311 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQK 363
Query: 527 NLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTET 559
+ S +D +S G +L +++ R +T
Sbjct: 364 GVAYDSS-ADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 31/213 (14%)
Query: 353 FKEKLGTGGYGNVYKGKFPD----GRL----VAVKVLEKTS-NFSDNFINEVATIGRIHH 403
F E LG G + ++KG + G+L V +KVL+K N+S++F + + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 404 VNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
+++ G C G L+ E++ GSL L + K +++ LE+A +A A+ +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINI--LWKLEVAKQLAAAMHFL 129
Query: 464 HNGCELRILHLDIKPQNVLL---------DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG 514
E ++H ++ +N+LL +P F K+SD G++ +V+ +
Sbjct: 130 E---ENTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISI------TVLPKDILQE 179
Query: 515 TIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEM 547
I ++ PE + N N + +D +S+G L E+
Sbjct: 180 RIPWVPPEC-IENPKNLNLATDKWSFGTTLWEI 211
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 353 FKEKLGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH--L 409
F + +G G +G V + + AVKVL+K + + + + N+ H L
Sbjct: 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 410 LGFCCDGSTRALIY---EYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
+G T +Y +Y+ G L L RE+ L + AR A +A A+ YLH+
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR-ARF--YAAEIASALGYLHS- 157
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
L I++ D+KP+N+LLD ++DFGL K + + S + GT Y+APE+ +
Sbjct: 158 --LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC--GTPEYLAPEVLHK 213
Query: 527 NLGNPSGKS-DVYSYGMLLLEMI 548
P ++ D + G +L EM+
Sbjct: 214 ---QPYDRTVDWWCLGAVLYEML 233
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 18/196 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LGTG +G V K + G A+K+L+K ++ +NE + ++ ++ L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D S ++ EY+ G + L R S AR A + EYLH+ L +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFY--AAQIVLTFEYLHS---LDL 162
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
++ D+KP+N+L+D +V+DFG AK + R+ P +APEI + N
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWXLCGTPEA----LAPEIILSKGYNK 217
Query: 532 SGKSDVYSYGMLLLEM 547
+ D ++ G+L+ EM
Sbjct: 218 A--VDWWALGVLIYEM 231
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 355 EKLGTGGYGNVYKGKFPDGR---LVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHL 409
EK+G G +G V+KG D R +VA+K+ LE+ + ++ E+ + + +
Sbjct: 13 EKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
G + +I EY+ GS DLL E L ++ I + ++YLH+
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE--- 123
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
+ +H DIK NVLL K++DFG+A + + + GT ++APE+ ++
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAY 181
Query: 530 NPSGKSDVYSYGMLLLEM 547
+ K+D++S G+ +E+
Sbjct: 182 D--SKADIWSLGITAIEL 197
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 357 LGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LG GG+G V+ + G+L A K L K + E + ++H I+ L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 412 FCCDGSTRALIYEYMPNGSLG-DLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ L+ M G + + + +++N + R + + +E+LH +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRN 309
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
I++ D+KP+NVLLD D ++SD GLA ++ G GT G++APE+ + +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLR 555
S D ++ G+ L EMI + R
Sbjct: 368 FS--VDYFALGVTLYEMIAARGPFR 390
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 355 EKLGTGGYGNVYKGKFPDGR---LVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHL 409
EK+G G +G V+KG D R +VA+K+ LE+ + ++ E+ + + +
Sbjct: 13 EKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
G + +I EY+ GS DLL E L ++ I + ++YLH+
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE--- 123
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
+ +H DIK NVLL K++DFG+A + + + GT ++APE+ ++
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVIKQSAY 181
Query: 530 NPSGKSDVYSYGMLLLEM 547
+ K+D++S G+ +E+
Sbjct: 182 D--SKADIWSLGITAIEL 197
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 21/233 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH--LLGF- 412
+G G Y V + R+ A+KV++K D I+ V T + H L+G
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 413 -CCDGSTRAL-IYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
C +R + EY+ G L + R+++ L + AR + +A + YLH E
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLA--LNYLH---ERG 141
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
I++ D+K NVLLD + K++D+G+ K R T + GT YIAPEI G
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILR---GE 196
Query: 531 PSGKS-DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPE 582
G S D ++ G+L+ EM+ + P + S+ + D+++ +++ +
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRS---PFDIVGSSDNPDQNTEDYLFQVILEKQ 246
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 355 EKLGTGGYGNVYKGKFPDGR---LVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHL 409
EK+G G +G V+KG D R +VA+K+ LE+ + ++ E+ + + +
Sbjct: 28 EKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 85
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
G + +I EY+ GS DLL E L ++ I + ++YLH+
Sbjct: 86 YGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE--- 138
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
+ +H DIK NVLL K++DFG+A + + + GT ++APE+ ++
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVIKQSAY 196
Query: 530 NPSGKSDVYSYGMLLLEM 547
+ K+D++S G+ +E+
Sbjct: 197 D--SKADIWSLGITAIEL 212
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 48/289 (16%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
E +G G +G VY G++ VA+++++ + D F EV + H N++ +G
Sbjct: 39 ELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
C A+I +L ++ K L + R +IA + + YLH I
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR--QIAQEIVKGMGYLHAKG---I 151
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR--------GTIGYIAPEI 523
LH D+K +NV D + ++DFGL S V G R G + ++APEI
Sbjct: 152 LHKDLKSKNVFYD-NGKVVITDFGLFSI-----SGVLQAGRREDKLRIQNGWLCHLAPEI 205
Query: 524 FMRNLGNP--------SGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIY 575
+R L S SDV++ G + E+ H R E + EA W
Sbjct: 206 -IRQLSPDTEEDKLPFSKHSDVFALGTIWYEL-----HAR--EWPFKTQPAEAII--WQM 255
Query: 576 DKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLS 624
++P + +++ + L+C ++RP+ T++++ML
Sbjct: 256 GTGMKPNLSQI------GMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 31/213 (14%)
Query: 353 FKEKLGTGGYGNVYKGKFPD----GRL----VAVKVLEKTS-NFSDNFINEVATIGRIHH 403
F E LG G + ++KG + G+L V +KVL+K N+S++F + + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 404 VNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
+++ G C G L+ E++ GSL L + K +++ LE+A +A A+ +L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINI--LWKLEVAKQLAWAMHFL 129
Query: 464 HNGCELRILHLDIKPQNVLL---------DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG 514
E ++H ++ +N+LL +P F K+SD G++ +V+ +
Sbjct: 130 E---ENTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISI------TVLPKDILQE 179
Query: 515 TIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEM 547
I ++ PE + N N + +D +S+G L E+
Sbjct: 180 RIPWVPPEC-IENPKNLNLATDKWSFGTTLWEI 211
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 355 EKLGTGGYGNVYKGKFPDGR---LVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHL 409
EK+G G +G V+KG D R +VA+K+ LE+ + ++ E+ + + +
Sbjct: 33 EKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 90
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
G + +I EY+ GS DLL E L ++ I + ++YLH+
Sbjct: 91 YGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE--- 143
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
+ +H DIK NVLL K++DFG+A + + + GT ++APE+ ++
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAY 201
Query: 530 NPSGKSDVYSYGMLLLEM 547
+ K+D++S G+ +E+
Sbjct: 202 D--SKADIWSLGITAIEL 217
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 357 LGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LG GG+G V+ + G+L A K L K + E + ++H I+ L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 412 FCCDGSTRALIYEYMPNGSLG-DLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ L+ M G + + + +++N + R + + +E+LH +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRN 309
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
I++ D+KP+NVLLD D ++SD GLA ++ G GT G++APE+ + +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLR 555
S D ++ G+ L EMI + R
Sbjct: 368 FS--VDYFALGVTLYEMIAARGPFR 390
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 357 LGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LG GG+G V+ + G+L A K L K + E + ++H I+ L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 412 FCCDGSTRALIYEYMPNGSLG-DLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ L+ M G + + + +++N + R + + +E+LH +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRN 309
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
I++ D+KP+NVLLD D ++SD GLA ++ G GT G++APE+ + +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLR 555
S D ++ G+ L EMI + R
Sbjct: 368 FS--VDYFALGVTLYEMIAARGPFR 390
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 357 LGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFS----DNFINEVATIGRIHHVNIIHLLG 411
LG GG+G V+ + G+L A K L K + E + ++H I+ L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 412 FCCDGSTRALIYEYMPNGSLG-DLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ L+ M G + + + +++N + R + + +E+LH +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRN 309
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
I++ D+KP+NVLLD D ++SD GLA ++ G GT G++APE+ + +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 531 PSGKSDVYSYGMLLLEMIEEKKHLR 555
S D ++ G+ L EMI + R
Sbjct: 368 FS--VDYFALGVTLYEMIAARGPFR 390
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKTSNF--SDN--FINEVATIGRIHHVNIIHLLG 411
+G G +G V + R V A+K+L K SD+ F E + + ++ L
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D ++ EYMP G L +L+S ++ K AR V A++ +H+ +
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAE--VVLALDAIHS---MGF 189
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+LLD K++DFG ++ +V GT YI+PE+ G+
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPDYISPEVLKSQGGDG 248
Query: 532 --SGKSDVYSYGMLLLEMI 548
+ D +S G+ L EM+
Sbjct: 249 YYGRECDWWSVGVFLYEML 267
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKTSNF--SDN--FINEVATIGRIHHVNIIHLLG 411
+G G +G V + R V A+K+L K SD+ F E + + ++ L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
D ++ EYMP G L +L+S ++ K AR V A++ +H+ +
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAE--VVLALDAIHS---MGF 194
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+LLD K++DFG ++ V T GT YI+PE+ G+
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDG 253
Query: 532 --SGKSDVYSYGMLLLEMI 548
+ D +S G+ L EM+
Sbjct: 254 YYGRECDWWSVGVFLYEML 272
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 357 LGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH----LLG 411
LG G +G V + GR A+K+L K + + + T R+ N H L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALK 71
Query: 412 FCCDGSTRA-LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ R + EY G L LSRE+ + + AR + A+EYLH+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARF--YGAEIVSALEYLHSR---D 125
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+++ DIK +N++LD D K++DFGL K + + TM GT Y+APE+ N
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKXFCGTPEYLAPEVLE---DN 180
Query: 531 PSGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 181 DYGRAVDWWGLGVVMYEMM 199
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 20/233 (8%)
Query: 325 NVKQFIKTYRSALLSNYSYNDIKKMTNGFK--EKLGTGGYGNVYKGKFPDGRLV-AVKVL 381
N+ F+ Y+ + D++ ++ + +G G +G V + R V A+K+L
Sbjct: 51 NIDNFLSRYKDTI---NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL 107
Query: 382 EKTSNF--SDN--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSR 437
K SD+ F E + + ++ L D ++ EYMP G L +L+S
Sbjct: 108 SKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS- 166
Query: 438 EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLA 497
++ K AR V A++ +H+ + +H D+KP N+LLD K++DFG
Sbjct: 167 -NYDVPEKWARFYTAE--VVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTC 220
Query: 498 KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP--SGKSDVYSYGMLLLEMI 548
++ V T GT YI+PE+ G+ + D +S G+ L EM+
Sbjct: 221 MKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 21/233 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH--LLGF- 412
+G G Y V + R+ A+KV++K D I+ V T + H L+G
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 413 -CCDGSTRAL-IYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
C +R + EY+ G L + R+++ L + AR + +A + YLH E
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLA--LNYLH---ERG 126
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
I++ D+K NVLLD + K++D+G+ K R T + GT YIAPEI G
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILR---GE 181
Query: 531 PSGKS-DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPE 582
G S D ++ G+L+ EM+ + P + S+ + D+++ +++ +
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRS---PFDIVGSSDNPDQNTEDYLFQVILEKQ 231
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 357 LGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH----LLG 411
LG G +G V + GR A+K+L K + + + T R+ N H L
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALK 76
Query: 412 FCCDGSTRA-LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ R + EY G L LSRE+ + + AR + A+EYLH+
Sbjct: 77 YAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFY--GAEIVSALEYLHSR---D 130
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+++ DIK +N++LD D K++DFGL K + + TM GT Y+APE+ N
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKXFCGTPEYLAPEVLE---DN 185
Query: 531 PSGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 186 DYGRAVDWWGLGVVMYEMM 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 357 LGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH----LLG 411
LG G +G V + GR A+K+L K + + + T R+ N H L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALK 71
Query: 412 FCCDGSTRA-LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ R + EY G L LSRE+ + + AR + A+EYLH+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFY--GAEIVSALEYLHSR---D 125
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+++ DIK +N++LD D K++DFGL K + + TM GT Y+APE+ N
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKXFCGTPEYLAPEVLE---DN 180
Query: 531 PSGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 181 DYGRAVDWWGLGVVMYEMM 199
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 21/233 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH--LLGF- 412
+G G Y V + R+ A+KV++K D I+ V T + H L+G
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 413 -CCDGSTRAL-IYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
C +R + EY+ G L + R+++ L + AR + +A + YLH E
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLA--LNYLH---ERG 130
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
I++ D+K NVLLD + K++D+G+ K R T + GT YIAPEI G
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILR---GE 185
Query: 531 PSGKS-DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPE 582
G S D ++ G+L+ EM+ + P + S+ + D+++ +++ +
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRS---PFDIVGSSDNPDQNTEDYLFQVILEKQ 235
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 357 LGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH----LLG 411
LG G +G V + GR A+K+L K + + + T R+ N H L
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALK 74
Query: 412 FCCDGSTRA-LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ R + EY G L LSRE+ + + AR + A+EYLH+
Sbjct: 75 YAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFY--GAEIVSALEYLHSR---D 128
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+++ DIK +N++LD D K++DFGL K + + TM GT Y+APE+ N
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLE---DN 183
Query: 531 PSGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 184 DYGRAVDWWGLGVVMYEMM 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 357 LGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH----LLG 411
LG G +G V + GR A+K+L K + + + T R+ N H L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALK 71
Query: 412 FCCDGSTRA-LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ R + EY G L LSRE+ + + AR + A+EYLH+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFY--GAEIVSALEYLHSR---D 125
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+++ DIK +N++LD D K++DFGL K + + TM GT Y+APE+ N
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLE---DN 180
Query: 531 PSGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 181 DYGRAVDWWGLGVVMYEMM 199
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 357 LGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH----LLG 411
LG G +G V + GR A+K+L K + + + T R+ N H L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALK 71
Query: 412 FCCDGSTRA-LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ R + EY G L LSRE+ + + AR + A+EYLH+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFY--GAEIVSALEYLHSR---D 125
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+++ DIK +N++LD D K++DFGL K + + TM GT Y+APE+ N
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKXFCGTPEYLAPEVLE---DN 180
Query: 531 PSGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 181 DYGRAVDWWGLGVVMYEMM 199
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 357 LGTGGYGNVYKGKFPDG-RLVAVKVLEK--------TSNFSDNFINEVATIGRIHHVNII 407
+G G +G V K + R+ A+K+L K T+ F + +V G + +
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE--RDVLVNGDCQWITAL 139
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL--EIALGVAHAIEYLHN 465
H D + L+ +Y G L LLS+ ++ L AR E+ L AI+ +H
Sbjct: 140 HYA--FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL----AIDSIH- 192
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM 525
+L +H DIKP NVLLD + +++DFG + + +V + GT YI+PEI
Sbjct: 193 --QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQ 249
Query: 526 R---NLGNPSGKSDVYSYGMLLLEMI 548
+G + D +S G+ + EM+
Sbjct: 250 AMEDGMGKYGPECDWWSLGVCMYEML 275
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 357 LGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH----LLG 411
LG G +G V + GR A+K+L K + + + T R+ N H L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLTALK 71
Query: 412 FCCDGSTRA-LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
+ R + EY G L LSRE+ + + AR + A+EYLH+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFY--GAEIVSALEYLHSR---D 125
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
+++ DIK +N++LD D K++DFGL K + + TM GT Y+APE+ N
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLE---DN 180
Query: 531 PSGKS-DVYSYGMLLLEMI 548
G++ D + G+++ EM+
Sbjct: 181 DYGRAVDWWGLGVVMYEMM 199
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 357 LGTGGYGNVYKGKFPDG-RLVAVKVLEK--------TSNFSDNFINEVATIGRIHHVNII 407
+G G +G V K + R+ A+K+L K T+ F + +V G + +
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE--RDVLVNGDCQWITAL 155
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL--EIALGVAHAIEYLHN 465
H D + L+ +Y G L LLS+ ++ L AR E+ L AI+ +H
Sbjct: 156 HYA--FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL----AIDSIH- 208
Query: 466 GCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFM 525
+L +H DIKP NVLLD + +++DFG + + +V + GT YI+PEI
Sbjct: 209 --QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQ 265
Query: 526 R---NLGNPSGKSDVYSYGMLLLEMI 548
+G + D +S G+ + EM+
Sbjct: 266 AMEDGMGKYGPECDWWSLGVCMYEML 291
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 24/245 (9%)
Query: 312 PFSEERQNIGDGLN-VKQFIKTYRSALLSNYSYNDIKKMTNGFKEKLGTGGYGNVYKGKF 370
P + +NI + LN ++ +K R + Y+ +K +G G +G V +
Sbjct: 45 PALRKNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKV--------IGRGAFGEVQLVRH 96
Query: 371 PDGRLV-AVKVLEKTSNF--SDN--FINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEY 425
+ V A+K+L K SD+ F E + + ++ L D ++ EY
Sbjct: 97 KASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEY 156
Query: 426 MPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDP 485
MP G L +L+S E+ L A++ +H+ + ++H D+KP N+LLD
Sbjct: 157 MPGGDLVNLMSNYDVPEKWAKFYTAEVVL----ALDAIHS---MGLIHRDVKPDNMLLDK 209
Query: 486 DFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP--SGKSDVYSYGML 543
K++DFG V T GT YI+PE+ G+ + D +S G+
Sbjct: 210 HGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 268
Query: 544 LLEMI 548
L EM+
Sbjct: 269 LFEML 273
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 355 EKLGTGGYGNVYKG-KFPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG 411
+++G G +G VYKG +VA+K+ LE+ + ++ E+ + + I G
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALG-----VAHAIEYLHNG 466
+ +I EY+ GS DLL KP L E + + ++YLH+
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL---------KPGPLEETYIATILREILKGLDYLHSE 135
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
R +H DIK NVLL K++DFG+A + + + GT ++APE+ +
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVIKQ 190
Query: 527 NLGNPSGKSDVYSYGMLLLEM 547
+ + K+D++S G+ +E+
Sbjct: 191 SAYD--FKADIWSLGITAIEL 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 356 KLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+LG G YG V K + P G+++AVK + T N + ++ ++ + + G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
+ E M + SL + + P +L +IA+ + A+E+LH+ +L
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLS 174
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H D+KP NVL++ K+ DFG++ + V T G Y+APE L
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKTIDAGCKPYMAPERINPELNQ 231
Query: 531 P--SGKSDVYSYGMLLLEM 547
S KSD++S G+ ++E+
Sbjct: 232 KGYSVKSDIWSLGITMIEL 250
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGF 412
+G+G YG+V G VA+K L + + F+ E+ + + H N+I LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
S+ Y++ ++ L ++ + + ++Y+H+ ++
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VV 148
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
H D+KP N+ ++ D K+ DFGLA+ + MTG T Y APE+ + + + +
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWM-HYN 202
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G ++ EM+ K
Sbjct: 203 QTVDIWSVGCIMAEMLTGK 221
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 21/233 (9%)
Query: 357 LGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIH--LLGF- 412
+G G Y V + R+ A++V++K D I+ V T + H L+G
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 413 -CCDGSTRAL-IYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
C +R + EY+ G L + R+++ L + AR + +A + YLH E
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLA--LNYLH---ERG 173
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
I++ D+K NVLLD + K++D+G+ K R T + GT YIAPEI G
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILR---GE 228
Query: 531 PSGKS-DVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPE 582
G S D ++ G+L+ EM+ + P + S+ + D+++ +++ +
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRS---PFDIVGSSDNPDQNTEDYLFQVILEKQ 278
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 356 KLGTGGYGNVYK-GKFPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG- 411
+LG G G V+K P G ++A K+ LE + I E+ + + I+ G
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 91
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
F DG ++ E+M GSL +L + P ++L ++++ V + YL + +
Sbjct: 92 FYSDGEI-SICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE--KHK 144
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKA--HSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
I+H D+KP N+L++ K+ DFG++ S S V GT Y++PE
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT- 197
Query: 529 GNPSGKSDVYSYGMLLLEM 547
+ S +SD++S G+ L+EM
Sbjct: 198 -HYSVQSDIWSMGLSLVEM 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 357 LGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
LG GG+ ++ D G++V +L K + E++ + H +++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 81
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCE 468
GF D ++ E SL +L R K L+ AR L +I LG +YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGC----QYLHRN-- 134
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEI 523
R++H D+K N+ L+ D K+ DFGLA + V G R GT YIAPE+
Sbjct: 135 -RVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEV 186
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
+ S + DV+S G ++ ++ K P ET+ T
Sbjct: 187 LSKK--GHSFEVDVWSIGCIMYTLLVGKP---PFETSCLKET 223
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G+ A K ++K S + EV + I H NI
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ A + + + YLH+
Sbjct: 92 ITLHDIFENKTDVVLILELVSGGELFDFLA-EKESLTEDEA--TQFLKQILDGVHYLHSK 148
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
RI H D+KP+N++L P K+ DFG+A + GT ++APE
Sbjct: 149 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPE 202
Query: 523 IFMRNLGNPSG-KSDVYSYGML 543
I P G ++D++S G++
Sbjct: 203 IVNY---EPLGLEADMWSIGVI 221
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 356 KLGTGGYGNVYK-GKFPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG- 411
+LG G G V+K P G ++A K+ LE + I E+ + + I+ G
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 134
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
F DG ++ E+M GSL +L + P ++L ++++ V + YL + +
Sbjct: 135 FYSDGEI-SICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE--KHK 187
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKA--HSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
I+H D+KP N+L++ K+ DFG++ S S V GT Y++PE
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT- 240
Query: 529 GNPSGKSDVYSYGMLLLEM 547
+ S +SD++S G+ L+EM
Sbjct: 241 -HYSVQSDIWSMGLSLVEM 258
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 356 KLGTGGYGNVYK-GKFPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG- 411
+LG G G V+K P G ++A K+ LE + I E+ + + I+ G
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 99
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
F DG ++ E+M GSL +L + P ++L ++++ V + YL + +
Sbjct: 100 FYSDGEI-SICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE--KHK 152
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKA--HSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
I+H D+KP N+L++ K+ DFG++ S S V GT Y++PE
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT- 205
Query: 529 GNPSGKSDVYSYGMLLLEM 547
+ S +SD++S G+ L+EM
Sbjct: 206 -HYSVQSDIWSMGLSLVEM 223
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G+ A K ++K S + EV + I H NI
Sbjct: 18 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ A + + + YLH+
Sbjct: 78 ITLHDIFENKTDVVLILELVSGGELFDFLA-EKESLTEDEA--TQFLKQILDGVHYLHSK 134
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
RI H D+KP+N++L P K+ DFG+A + GT ++APE
Sbjct: 135 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPE 188
Query: 523 IFMRNLGNPSGKSDVYSYGML 543
I N ++D++S G++
Sbjct: 189 IV--NYEPLGLEADMWSIGVI 207
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K + + + EV+ + ++ H NI
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ +KE+LS + A + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEA--TSFIKQILDGVNYLHTK 134
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
+I H D+KP+N++L P K+ DFGLA V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
Query: 523 IFMRNLGNPSGKSDVYSYGML 543
I N ++D++S G++
Sbjct: 189 IV--NYEPLGLEADMWSIGVI 207
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 355 EKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G+ A K ++K S + EV + I H NI
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ EKE+L+ A + + + YLH+
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFDFLA-EKESLTEDEA--TQFLKQILDGVHYLHSK 127
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
RI H D+KP+N++L P K+ DFG+A + GT ++APE
Sbjct: 128 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPE 181
Query: 523 IFMRNLGNPSGKSDVYSYGML 543
I N ++D++S G++
Sbjct: 182 IV--NYEPLGLEADMWSIGVI 200
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 357 LGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
LG GG+ ++ D G++V +L K + E++ + H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 83
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCE 468
GF D ++ E SL +L R K L+ AR L +I LG +YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGC----QYLHRN-- 136
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEI 523
R++H D+K N+ L+ D K+ DFGLA + V G R GT YIAPE+
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEV 188
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
+ S + DV+S G ++ ++ K P ET+ T
Sbjct: 189 LSKK--GHSFEVDVWSIGCIMYTLLVGKP---PFETSCLKET 225
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 353 FKEKLGTGG--YGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRI-HHVNIIHL 409
F +KLG GG Y ++ +G DG A+K + A + R+ +H NI+ L
Sbjct: 33 FIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRL 91
Query: 410 LGFCCD--GSTRA--LIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLH 464
+ +C G+ L+ + G+L + + R K+ + L ++L + LG+ +E +H
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG---------- 514
H D+KP N+LL + P + D G S N++ + + G R
Sbjct: 152 AKG---YAHRDLKPTNILLGDEGQPVLMDLG-----SMNQACIHVEGSRQALTLQDWAAQ 203
Query: 515 --TIGYIAPEIF-MRNLGNPSGKSDVYSYGMLLLEMI 548
TI Y APE+F +++ ++DV+S G +L M+
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 20/198 (10%)
Query: 356 KLGTGGYGNVYKGKF-PDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG- 411
+LG G G V K + P G ++A K+ LE + I E+ + + I+ G
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 82
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F DG ++ E+M GSL +L KE + L ++++ V + YL + +I
Sbjct: 83 FYSDGEI-SICMEHMDGGSLDQVL---KEAKRIPEEILGKVSIAVLRGLAYLRE--KHQI 136
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKA--HSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
+H D+KP N+L++ K+ DFG++ S S V GT Y+APE
Sbjct: 137 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMAPERLQGT-- 188
Query: 530 NPSGKSDVYSYGMLLLEM 547
+ S +SD++S G+ L+E+
Sbjct: 189 HYSVQSDIWSMGLSLVEL 206
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 356 KLGTGGYGNVYK-GKFPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG- 411
+LG G G V+K P G ++A K+ LE + I E+ + + I+ G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
F DG ++ E+M GSL +L + P ++L ++++ V + YL + +
Sbjct: 73 FYSDGEI-SICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE--KHK 125
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKA--HSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
I+H D+KP N+L++ K+ DFG++ S S V GT Y++PE
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT- 178
Query: 529 GNPSGKSDVYSYGMLLLEM 547
+ S +SD++S G+ L+EM
Sbjct: 179 -HYSVQSDIWSMGLSLVEM 196
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 356 KLGTGGYGNVYK-GKFPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG- 411
+LG G G V+K P G ++A K+ LE + I E+ + + I+ G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
F DG ++ E+M GSL +L + P ++L ++++ V + YL + +
Sbjct: 73 FYSDGEI-SICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE--KHK 125
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKA--HSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
I+H D+KP N+L++ K+ DFG++ S S V GT Y++PE
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT- 178
Query: 529 GNPSGKSDVYSYGMLLLEM 547
+ S +SD++S G+ L+EM
Sbjct: 179 -HYSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 356 KLGTGGYGNVYK-GKFPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG- 411
+LG G G V+K P G ++A K+ LE + I E+ + + I+ G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
F DG ++ E+M GSL +L + P ++L ++++ V + YL + +
Sbjct: 73 FYSDGEI-SICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE--KHK 125
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKA--HSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
I+H D+KP N+L++ K+ DFG++ S S V GT Y++PE
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT- 178
Query: 529 GNPSGKSDVYSYGMLLLEM 547
+ S +SD++S G+ L+EM
Sbjct: 179 -HYSVQSDIWSMGLSLVEM 196
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 356 KLGTGGYGNVYK-GKFPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG- 411
+LG G G V+K P G ++A K+ LE + I E+ + + I+ G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
F DG ++ E+M GSL +L + P ++L ++++ V + YL + +
Sbjct: 73 FYSDGEI-SICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE--KHK 125
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKA--HSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
I+H D+KP N+L++ K+ DFG++ S S V GT Y++PE
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT- 178
Query: 529 GNPSGKSDVYSYGMLLLEM 547
+ S +SD++S G+ L+EM
Sbjct: 179 -HYSVQSDIWSMGLSLVEM 196
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 357 LGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
LG GG+ ++ D G++V +L K + E++ + H +++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 105
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCE 468
GF D ++ E SL +L R K L+ AR L +I LG +YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGC----QYLHRN-- 158
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEI 523
R++H D+K N+ L+ D K+ DFGLA + V G R GT YIAPE+
Sbjct: 159 -RVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEV 210
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
+ S + DV+S G ++ ++ K P ET+ T
Sbjct: 211 LSKK--GHSFEVDVWSIGCIMYTLLVGKP---PFETSCLKET 247
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 357 LGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
LG GG+ ++ D G++V +L K + E++ + H +++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 87
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCE 468
GF D ++ E SL +L R K L+ AR L +I LG +YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGC----QYLHRN-- 140
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEI 523
R++H D+K N+ L+ D K+ DFGLA + V G R GT YIAPE+
Sbjct: 141 -RVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEV 192
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
+ S + DV+S G ++ ++ K P ET+ T
Sbjct: 193 LSKK--GHSFEVDVWSIGCIMYTLLVGKP---PFETSCLKET 229
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 357 LGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
LG GG+ ++ D G++V +L K + E++ + H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 83
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCE 468
GF D ++ E SL +L R K L+ AR L +I LG +YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGC----QYLHRN-- 136
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEI 523
R++H D+K N+ L+ D K+ DFGLA + V G R GT YIAPE+
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEV 188
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
+ S + DV+S G ++ ++ K P ET+ T
Sbjct: 189 LSKK--GHSFEVDVWSIGCIMYTLLVGKP---PFETSCLKET 225
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG GG+ Y+ D + V A KV+ K+ + + E+A + + +++ G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F D ++ E SL +L R K + + + ++YLHN R+
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGVQYLHNN---RV 147
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEIFMR 526
+H D+K N+ L+ D K+ DFGLA + + G R GT YIAPE+ +
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 527 NLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
S + D++S G +L ++ K P ET+ T
Sbjct: 201 K--GHSFEVDIWSLGCILYTLLVGKP---PFETSCLKET 234
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 357 LGTGGYGNVYKGKFPD------GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
LG GG+ ++ D G++V +L K + E++ + H +++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 107
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCE 468
GF D ++ E SL +L R K L+ AR L +I LG +YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGC----QYLHRN-- 160
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEI 523
R++H D+K N+ L+ D K+ DFGLA + V G R GT YIAPE+
Sbjct: 161 -RVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEV 212
Query: 524 FMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
+ S + DV+S G ++ ++ K P ET+ T
Sbjct: 213 LSKK--GHSFEVDVWSIGCIMYTLLVGKP---PFETSCLKET 249
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDXELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGF 412
+G+G YG+V G VA+K L + + F+ E+ + + H N+I LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 413 CCDGSTRALIYEY---MP--NGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
S+ Y++ MP L ++ E ++ + + ++Y+H+
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGME-----FSEEKIQYLVYQMLKGLKYIHSAG 164
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
++H D+KP N+ ++ D K+ DFGLA+ + MTG T Y APE+ +
Sbjct: 165 ---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSW 216
Query: 528 LGNPSGKSDVYSYGMLLLEMIEEK 551
+ + + D++S G ++ EM+ K
Sbjct: 217 M-HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG GG+ Y+ D + V A KV+ K+ + + E+A + + +++ G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F D ++ E SL +L R K + + + ++YLHN R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGVQYLHNN---RV 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEIFMR 526
+H D+K N+ L+ D K+ DFGLA + + G R GT YIAPE+ +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKTLCGTPNYIAPEVLCK 216
Query: 527 NLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
S + D++S G +L ++ K P ET+ T
Sbjct: 217 K--GHSFEVDIWSLGCILYTLLVGKP---PFETSCLKET 250
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG GG+ Y+ D + V A KV+ K+ + + E+A + + +++ G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F D ++ E SL +L R K + + + ++YLHN R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGVQYLHNN---RV 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEIFMR 526
+H D+K N+ L+ D K+ DFGLA + + G R GT YIAPE+ +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKXLCGTPNYIAPEVLCK 216
Query: 527 NLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
S + D++S G +L ++ K P ET+ T
Sbjct: 217 K--GHSFEVDIWSLGCILYTLLVGKP---PFETSCLKET 250
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 357 LGTGGYGNVYKGKFPDGRLV-AVKVLEKT----SNFSDNFINEVATIGRIHHVNIIHLLG 411
LG GG+ Y+ D + V A KV+ K+ + + E+A + + +++ G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F D ++ E SL +L R K + + + ++YLHN R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGVQYLHNN---RV 163
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEIFMR 526
+H D+K N+ L+ D K+ DFGLA + + G R GT YIAPE+ +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDLCGTPNYIAPEVLCK 216
Query: 527 NLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNT 565
S + D++S G +L ++ K P ET+ T
Sbjct: 217 K--GHSFEVDIWSLGCILYTLLVGKP---PFETSCLKET 250
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 357 LGTGGYGNVYKGKFPDG--RLVAVKVLEK------TSNFSDNFIN---EVATIGRIHHVN 405
LG+G G V K F + VA+K++ K ++ +D +N E+ + +++H
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH- 464
II + F D ++ E M G L D + N LK A + A++YLH
Sbjct: 77 IIKIKNFF-DAEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 465 NGCELRILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
NG I+H D+KP+NVLL + D K++DFG +K + T+ GT Y+AP
Sbjct: 133 NG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAP 185
Query: 522 EIFMR-NLGNPSGKSDVYSYGMLLL 545
E+ + + D +S G++L
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 357 LGTGGYGNVYKGKFPDG--RLVAVKVLEK------TSNFSDNFIN---EVATIGRIHHVN 405
LG+G G V K F + VA+K++ K ++ +D +N E+ + +++H
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH- 464
II + F D ++ E M G L D + N LK A + A++YLH
Sbjct: 77 IIKIKNFF-DAEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 465 NGCELRILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
NG I+H D+KP+NVLL + D K++DFG +K + T+ GT Y+AP
Sbjct: 133 NG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAP 185
Query: 522 EIFMR-NLGNPSGKSDVYSYGMLLL 545
E+ + + D +S G++L
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 357 LGTGGYGNVYKGKFPDG--RLVAVKVLEK------TSNFSDNFIN---EVATIGRIHHVN 405
LG+G G V K F + VA+K++ K ++ +D +N E+ + +++H
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH- 464
II + F D ++ E M G L D + N LK A + A++YLH
Sbjct: 77 IIKIKNFF-DAEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 465 NGCELRILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
NG I+H D+KP+NVLL + D K++DFG +K + T+ GT Y+AP
Sbjct: 133 NG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAP 185
Query: 522 EIFMR-NLGNPSGKSDVYSYGMLLL 545
E+ + + D +S G++L
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 357 LGTGGYGNVYKGKFPDG--RLVAVKVLEK------TSNFSDNFIN---EVATIGRIHHVN 405
LG+G G V K F + VA+K++ K ++ +D +N E+ + +++H
Sbjct: 17 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 75
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH- 464
II + F D ++ E M G L D + N LK A + A++YLH
Sbjct: 76 IIKIKNFF-DAEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 465 NGCELRILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
NG I+H D+KP+NVLL + D K++DFG +K + T+ GT Y+AP
Sbjct: 132 NG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAP 184
Query: 522 EIFMR-NLGNPSGKSDVYSYGMLLL 545
E+ + + D +S G++L
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 348 KMTNGF--KEKLGTGGYGN----VYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRI 401
+ T+G+ KE +G G Y ++K + AVK+++K+ I + G+
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXE---FAVKIIDKSKRDPTEEIEILLRYGQ- 74
Query: 402 HHVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIE 461
H NII L DG ++ E G L D + R+K + + +L + +E
Sbjct: 75 -HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVL---FTITKTVE 130
Query: 462 YLHNGCELRILHLDIKPQNVL-LDPDFTP---KVSDFGLAKAHSRNRSVVTMTGPRGTIG 517
YLH ++H D+KP N+L +D P ++ DFG AK + + P T
Sbjct: 131 YLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL--LXTPCYTAN 185
Query: 518 YIAPEIFMRNLGNPSGKSDVYSYGMLL 544
++APE+ R D++S G+LL
Sbjct: 186 FVAPEVLERQ--GYDAACDIWSLGVLL 210
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 156
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 157 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 210
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 211 NQTVDIWSVGCIMAELL 227
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA---DI 142
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 196
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 197 NQTVDIWSVGCIMAELL 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 85/206 (41%), Gaps = 15/206 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF-PDGRLVAVKVLEKTSN--FSDNFINEVATIGRIHHVNIIHL 409
K LG G YG V P G +VA+K +E F+ + E+ + H NII +
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI 74
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
S Y+ + L R L + A++ LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS--- 131
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAK---AHSRNRSVVT-----MTGPRGTIGYIAP 521
++H D+KP N+L++ + KV DFGLA+ + + S T MT T Y AP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEM 547
E+ + + S DV+S G +L E+
Sbjct: 192 EVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L K + E+ + + H N+I LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 158
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 212
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 213 NQTVDIWSVGCIMAELL 229
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 35/208 (16%)
Query: 356 KLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG 411
K+G G YG V+K + D G++VA+K ++ + + E+ + ++ H N+++LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLE-IALGVAHAIEYLH-NGCEL 469
L++EY + L +L R + + P L++ I A+ + H + C
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHEL-DRYQRGV---PEHLVKSITWQTLQAVNFCHKHNC-- 123
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPR-------GTIGYIAPE 522
+H D+KP+N+L+ K+ DFG A+ +TGP T Y +PE
Sbjct: 124 --IHRDVKPENILITKHSVIKLCDFGFAR---------LLTGPSDYYDDEVATRWYRSPE 172
Query: 523 IFM--RNLGNPSGKSDVYSYGMLLLEMI 548
+ + G P DV++ G + E++
Sbjct: 173 LLVGDTQYGPP---VDVWAIGCVFAELL 197
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 151
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 205
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 206 NQTVDIWSVGCIMAELL 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKV--LEKTSNFS-DNFINEVATIGRI--HHVNIIHL 409
+++G+GG V++ ++ A+K LE+ N + D++ NE+A + ++ H II L
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ T IY M G++ DL S K+ S+ P + A+ +H +
Sbjct: 122 YDYEI---TDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QH 174
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
I+H D+KP N L+ D K+ DFG+A + + V GT+ Y+ PE
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGXVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 345 DIKKMTNGFKEKLGTGGYGNVYKGKFPDGRLVAVKVL---EKTSNFSDNFINEVATIGRI 401
D K++ F KL G ++KG++ G + VKVL + ++ S +F E +
Sbjct: 8 DFKQL--NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF 64
Query: 402 HHVNIIHLLGFCCD--GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHA 459
H N++ +LG C LI + P GSL ++L E N + ++ ++ AL A
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVL-HEGTNFVVDQSQAVKFALDXARG 123
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYI 519
+LH E I + ++V +D D T ++S + + G ++
Sbjct: 124 XAFLHT-LEPLIPRHALNSRSVXIDEDXTARISXADV-------KFSFQSPGRXYAPAWV 175
Query: 520 APEIFMRNLGNPSGKS-DVYSYGMLLLEMI 548
APE + + + +S D +S+ +LL E++
Sbjct: 176 APEALQKKPEDTNRRSADXWSFAVLLWELV 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 447 ARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSV 506
AR + A + +E LH RI++ D+KP+N+LLD ++SD GLA +
Sbjct: 286 ARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 340
Query: 507 VTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
T+ G GT+GY+APE+ S D ++ G LL EMI
Sbjct: 341 -TIKGRVGTVGYMAPEVVKNERYTFS--PDWWALGCLLYEMI 379
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 151
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 205
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 206 NQTVDIWSVGCIMAELL 222
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSD-NFINEVATIGRIHHVNIIHLLGF 412
E LG G +G K + G ++ +K L + + F+ EV + + H N++ +G
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRIL 472
I EY+ G+L ++ ++ + A +A + YLH+ + I+
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPW--SQRVSFAKDIASGMAYLHS---MNII 130
Query: 473 HLDIKPQNVLLDPDFTPKVSDFGLAK----AHSRNRSVVTMTGPR--------GTIGYIA 520
H D+ N L+ + V+DFGLA+ ++ + ++ P G ++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 521 PEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
PE M N + K DV+S+G++L E+I
Sbjct: 191 PE--MINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 357 LGTGGYGNVYKGKFPDG--RLVAVKVLEK------TSNFSDNFIN---EVATIGRIHHVN 405
LG+G G V K F + VA+K++ K ++ +D +N E+ + +++H
Sbjct: 24 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 82
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH- 464
II + F D ++ E M G L D + N LK A + A++YLH
Sbjct: 83 IIKIKNFF-DAEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 465 NGCELRILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
NG I+H D+KP+NVLL + D K++DFG +K + T+ GT Y+AP
Sbjct: 139 NG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAP 191
Query: 522 EIFMR-NLGNPSGKSDVYSYGMLLL 545
E+ + + D +S G++L
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 142
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 196
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 197 NQTVDIWSVGCIMAELL 213
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 357 LGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCDG 416
+G G +G V++ K + VA+K + + F + E+ + + H N++ L F
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR---ELQIMRIVKHPNVVDLKAFFYSN 104
Query: 417 STRA------LIYEYMPNGSLGDLLSREKENL-SLKPARLLEIAL-GVAHAIEYLHNGCE 468
+ L+ EY+P SR L P L+++ + + ++ Y+H+
Sbjct: 105 GDKKDEVFLNLVLEYVPETVYRA--SRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS--- 159
Query: 469 LRILHLDIKPQNVLLD-PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
+ I H DIKPQN+LLD P K+ DFG AK V+ R Y APE+
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR---YYRAPELIF-G 215
Query: 528 LGNPSGKSDVYSYGMLLLEMIE 549
N + D++S G ++ E+++
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQ 237
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K + + + EV+ + ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ +KE+LS + A + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEA--TSFIKQILDGVNYLHTK 134
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
+I H D+KP+N++L P K+ DFGLA V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
Query: 523 IFMRNLGNPSGKSDVYSYGML 543
I N ++D++S G++
Sbjct: 189 IV--NYEPLGLEADMWSIGVI 207
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 18/199 (9%)
Query: 357 LGTGGYGNV---YKGKFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLL 410
+G+G YG+V Y K G +AVK L + + E+ + + H N+I LL
Sbjct: 59 VGSGAYGSVCSSYDVK--SGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 411 G-FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
F S Y+ +G L+ + L + + + ++Y+H+
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA--- 173
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLG 529
I+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N
Sbjct: 174 DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWM 227
Query: 530 NPSGKSDVYSYGMLLLEMI 548
+ + D++S G ++ E++
Sbjct: 228 HYNMTVDIWSVGCIMAELL 246
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 166
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 220
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 221 NQTVDIWSVGCIMAELL 237
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 165
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 219
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 220 NQTVDIWSVGCIMAELL 236
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 357 LGTGGYGNVYKGKFPDG---RLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G +G V K G R A K+ + D F E+ + + H NII L
Sbjct: 34 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
D + L+ E G L + + ++ AR+++ V A+ Y H +L + H
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK---DVLSAVAYCH---KLNVAH 146
Query: 474 LDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
D+KP+N L PD K+ DFGLA +R + M GT Y++P++ + L
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLA---ARFKPGKMMRTKVGTPYYVSPQV-LEGLYG 202
Query: 531 PSGKSDVYSYGMLLLEMI 548
P + D +S G+++ ++
Sbjct: 203 P--ECDEWSAGVMMYVLL 218
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 357 LGTGGYGNVYKGKFPDG---RLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G +G V K G R A K+ + D F E+ + + H NII L
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
D + L+ E G L + + ++ AR+++ V A+ Y H +L + H
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK---DVLSAVAYCH---KLNVAH 129
Query: 474 LDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
D+KP+N L PD K+ DFGLA +R + M GT Y++P++ + L
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLA---ARFKPGKMMRTKVGTPYYVSPQV-LEGLYG 185
Query: 531 PSGKSDVYSYGMLLLEMI 548
P + D +S G+++ ++
Sbjct: 186 P--ECDEWSAGVMMYVLL 201
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 33/249 (13%)
Query: 355 EKLGTGGYGNVYK-GKFPDGRLVAVKVL--EKTSNFSDNFINEVATIGRI-HHVNIIHLL 410
E+LG G + V + K G+ A K++ +K S + A I R+ H NI+ L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 411 GFCCDGSTRALIYEYMPNGSL-GDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ LI++ + G L D+++RE + + + +I V H ++
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC-------HQM 140
Query: 470 RILHLDIKPQNVLLDPDF---TPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
++H D+KP+N+LL K++DFGLA + G GT GY++PE+ +
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRK 198
Query: 527 NLGNPSGKS-DVYSYGMLLLEMI-------EEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
+P GK D+++ G++L ++ +E +H + +G+ + P+W
Sbjct: 199 ---DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS--PEW---DT 250
Query: 579 IQPEKEDFV 587
+ PE +D +
Sbjct: 251 VTPEAKDLI 259
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 157
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 158 IHRDLKPSNLAVNEDXELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 211
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 212 NQTVDIWSVGCIMAELL 228
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 152
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 206
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 207 NQTVDIWSVGCIMAELL 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 153
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR-HTADE----MTGYVATRWYRAPEI-MLNWMHY 207
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 208 NQTVDIWSVGCIMAELL 224
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 85/206 (41%), Gaps = 15/206 (7%)
Query: 353 FKEKLGTGGYGNVYKGKF-PDGRLVAVKVLEKTSN--FSDNFINEVATIGRIHHVNIIHL 409
K LG G YG V P G +VA+K +E F+ + E+ + H NII +
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI 74
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
S Y+ + L R L + A++ LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS--- 131
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAK---AHSRNRSVVT-----MTGPRGTIGYIAP 521
++H D+KP N+L++ + KV DFGLA+ + + S T MT T Y AP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 522 EIFMRNLGNPSGKSDVYSYGMLLLEM 547
E+ + + S DV+S G +L E+
Sbjct: 192 EVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 356 KLGTGGYGNVYK-GKFPDGRLVAVKV--LEKTSNFSDNFINEVATIGRIHHVNIIHLLG- 411
+LG G G V+K P G ++A K+ LE + I E+ + + I+ G
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 75
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
F DG ++ E+M GSL +L + P ++L ++++ V + YL + +
Sbjct: 76 FYSDGEI-SICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE--KHK 128
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGP-RGTIGYIAPEIFMRNLG 529
I+H D+KP N+L++ K+ DFG++ + + M GT Y++PE
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDEMANEFVGTRSYMSPERLQGT-- 181
Query: 530 NPSGKSDVYSYGMLLLEM 547
+ S +SD++S G+ L+EM
Sbjct: 182 HYSVQSDIWSMGLSLVEM 199
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 153
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR-HTADE----MTGYVATRWYRAPEI-MLNWMHY 207
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 208 NQTVDIWSVGCIMAELL 224
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 153
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR-HTADE----MTGYVATRWYRAPEI-MLNWMHY 207
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 208 NQTVDIWSVGCIMAELL 224
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKV--LEKTSNFS-DNFINEVATIGRI--HHVNIIHL 409
+++G+GG V++ ++ A+K LE+ N + D++ NE+A + ++ H II L
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ T IY M G++ DL S K+ S+ P + A+ +H
Sbjct: 94 YDYEI---TDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 147
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
I+H D+KP N L+ D K+ DFG+A + + V GT+ Y+ PE
Sbjct: 148 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 357 LGTGGYGNVYKGKFPDG-RLVAVKVLEK--------TSNFSDNFINEVATIGRIHHVNII 407
+G G +G V K + ++ A+K+L K T+ F + +V G + +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE--RDVLVNGDSKWITTL 139
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGC 467
H D + L+ +Y G L LLS+ ++ L + AR + +A I+ +H
Sbjct: 140 HYA--FQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIA--IDSVH--- 192
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR- 526
+L +H DIKP N+L+D + +++DFG + +V + GT YI+PEI
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAM 251
Query: 527 --NLGNPSGKSDVYSYGMLLLEMI 548
G + D +S G+ + EM+
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEML 275
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 151
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 205
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 206 NQTVDIWSVGCIMAELL 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 145
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 146 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 199
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 200 NQTVDIWSVGCIMAELL 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 153
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 207
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 208 NQTVDIWSVGCIMAELL 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKV--LEKTSNFS-DNFINEVATIGRI--HHVNIIHL 409
+++G+GG V++ ++ A+K LE+ N + D++ NE+A + ++ H II L
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ T IY M G++ DL S K+ S+ P + A+ +H +
Sbjct: 122 YDYEI---TDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QH 174
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
I+H D+KP N L+ D K+ DFG+A + + V GT+ Y+ PE
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K + + + EV+ + ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ +KE+LS + A + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEA--TSFIKQILDGVNYLHTK 134
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
+I H D+KP+N++L P K+ DFGLA V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
Query: 523 IFMRNLGNPSGKSDVYSYGML 543
I N ++D++S G++
Sbjct: 189 IV--NYEPLGLEADMWSIGVI 207
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K + + + EV+ + ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ +KE+LS + A + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEA--TSFIKQILDGVNYLHTK 134
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
+I H D+KP+N++L P K+ DFGLA V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
Query: 523 IFMRNLGNPSGKSDVYSYGML 543
I N ++D++S G++
Sbjct: 189 IV--NYEPLGLEADMWSIGVI 207
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 447 ARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSV 506
AR + A + +E LH RI++ D+KP+N+LLD ++SD GLA +
Sbjct: 286 ARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 340
Query: 507 VTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
T+ G GT+GY+APE+ S D ++ G LL EMI
Sbjct: 341 -TIKGRVGTVGYMAPEVVKNERYTFS--PDWWALGCLLYEMI 379
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 357 LGTGGYGNVYKGKFPDG--RLVAVKVLEK------TSNFSDNFIN---EVATIGRIHHVN 405
LG+G G V K F + VA++++ K ++ +D +N E+ + +++H
Sbjct: 143 LGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 201
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH- 464
II + F D ++ E M G L D + K LK A + A++YLH
Sbjct: 202 IIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHE 257
Query: 465 NGCELRILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
NG I+H D+KP+NVLL + D K++DFG +K + T+ GT Y+AP
Sbjct: 258 NG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAP 310
Query: 522 EIFMR-NLGNPSGKSDVYSYGMLLL 545
E+ + + D +S G++L
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 449 LLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVT 508
L+ + VA +E+L + + +H D+ +N+LL + K+ DFGLA+ +N V
Sbjct: 201 LISYSFQVARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVR 257
Query: 509 MTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
R + ++APE + S KSDV+SYG+LL E+
Sbjct: 258 KGDTRLPLKWMAPESIFDKIY--STKSDVWSYGVLLWEIF 295
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSD--NFINEVATIGRI-HHVNII 407
LG G +G V + K P R VAVK+L++ + S+ + E+ + I HH+N++
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 408 HLLGFCC-DGSTRALIYEYMPNGSLGDLLSREKE 440
+LLG C G +I EY G+L + L +++
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRD 128
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 13/199 (6%)
Query: 356 KLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDN---FINEVATIGRIHHVNIIHLLG 411
+LG G YG V K + P G+++AVK + T N + ++ ++ + + G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
+ E M + SL + + P +L +IA+ + A+E+LH+ +L
Sbjct: 74 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLS 130
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
++H D+KP NVL++ K+ DFG++ + V G Y+APE L
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAPERINPELNQ 187
Query: 531 P--SGKSDVYSYGMLLLEM 547
S KSD++S G+ ++E+
Sbjct: 188 KGYSVKSDIWSLGITMIEL 206
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 357 LGTGGYGNVYKGKFPDG--RLVAVKVLEK------TSNFSDNFIN---EVATIGRIHHVN 405
LG+G G V K F + VA++++ K ++ +D +N E+ + +++H
Sbjct: 157 LGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 215
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH- 464
II + F D ++ E M G L D + K LK A + A++YLH
Sbjct: 216 IIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHE 271
Query: 465 NGCELRILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
NG I+H D+KP+NVLL + D K++DFG +K + T+ GT Y+AP
Sbjct: 272 NG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAP 324
Query: 522 EIFMR-NLGNPSGKSDVYSYGMLLL 545
E+ + + D +S G++L
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 148
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 202
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 203 NQTVDIWSVGCIMAELL 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 148
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 149 IHRDLKPSNLAVNEDSELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 202
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 203 NQTVDIWSVGCIMAELL 219
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKV--LEKTSNFS-DNFINEVATIGRI--HHVNIIHL 409
+++G+GG V++ ++ A+K LE+ N + D++ NE+A + ++ H II L
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ T IY M G++ DL S K+ S+ P + A+ +H
Sbjct: 94 YDYEI---TDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 147
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
I+H D+KP N L+ D K+ DFG+A + V GT+ Y+ PE
Sbjct: 148 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE 198
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 148
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 202
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 203 NQTVDIWSVGCIMAELL 219
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKV--LEKTSNFS-DNFINEVATIGRI--HHVNIIHL 409
+++G+GG V++ ++ A+K LE+ N + D++ NE+A + ++ H II L
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ T IY M G++ DL S K+ S+ P + A+ +H +
Sbjct: 75 YDYEI---TDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QH 127
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
I+H D+KP N L+ D K+ DFG+A + + V GT+ Y+ PE
Sbjct: 128 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 143
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 197
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 198 NQTVDIWSVGCIMAELL 214
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 152
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 153 IHRDLKPSNLAVNEDSELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 206
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 207 NQTVDIWSVGCIMAELL 223
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K + + + EV+ + ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ +KE+LS + A + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEA--TSFIKQILDGVNYLHTK 134
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
+I H D+KP+N++L P K+ DFGLA V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
Query: 523 IFMRNLGNPSGKSDVYSYGML 543
I N ++D++S G++
Sbjct: 189 IV--NYEPLGLEADMWSIGVI 207
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 157
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 158 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 211
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 212 NQTVDIWSVGCIMAELL 228
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 148
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 202
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 203 NQTVDIWSVGCIMAELL 219
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 143
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 197
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 198 NQTVDIWSVGCIMAELL 214
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 19/208 (9%)
Query: 353 FKEKLGTGGYGNVYKGKF-PDGRLVAVKVLEKTSN--FSDNFINEVATIGRIHHVNIIHL 409
K LG G YG V P G +VA+K +E F+ + E+ + H NII +
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI 74
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
S Y+ + L R L + A++ LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS--- 131
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRG----------TIGYI 519
++H D+KP N+L++ + KV DFGLA+ + S + P G T Y
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 520 APEIFMRNLGNPSGKSDVYSYGMLLLEM 547
APE+ + + S DV+S G +L E+
Sbjct: 190 APEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 151
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 205
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 206 NQTVDIWSVGCIMAELL 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 158
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 212
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 213 NQTVDIWSVGCIMAELL 229
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 158
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 212
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 213 NQTVDIWSVGCIMAELL 229
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 152
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 206
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 207 NQTVDIWSVGCIMAELL 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 144
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 145 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 198
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 199 NQTVDIWSVGCIMAELL 215
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 142
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 196
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 197 NQTVDIWSVGCIMAELL 213
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKV--LEKTSNFS-DNFINEVATIGRI--HHVNIIHL 409
+++G+GG V++ ++ A+K LE+ N + D++ NE+A + ++ H II L
Sbjct: 18 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 77
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ T IY M G++ DL S K+ S+ P + A+ +H +
Sbjct: 78 YDYEI---TDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QH 130
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
I+H D+KP N L+ D K+ DFG+A + + V GT+ Y+ PE
Sbjct: 131 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNAMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 356 KLGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCC 414
+LG G YG V+K + DGRL AVK + ++A +G V CC
Sbjct: 64 RLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP----CC 119
Query: 415 DGSTRALIYE-----YMPNGSLGDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGC 467
+A +E Y+ G L + E SL A++ A+ +LH+
Sbjct: 120 VRLEQA--WEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG 177
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFG-LAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
++HLD+KP N+ L P K+ DFG L + + V PR Y+APE+
Sbjct: 178 ---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR----YMAPELLQG 230
Query: 527 NLGNPSGKSDVYSYGMLLLEM 547
+ G +DV+S G+ +LE+
Sbjct: 231 SYGT---AADVFSLGLTILEV 248
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 15/197 (7%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+LG G +G V++ + + + K E+ + I+ L G +
Sbjct: 100 RLGRGSFGEVHRM---EDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVRE 156
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
G + E + GSLG L+ KE L R L +EYLH+ RILH D
Sbjct: 157 GPWVNIFMELLEGGSLGQLV---KEQGCLPEDRALYYLGQALEGLEYLHS---RRILHGD 210
Query: 476 IKPQNVLLDPDFT-PKVSDFGLA---KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+K NVLL D + + DFG A + +S++T GT ++APE+ + +
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR--SC 268
Query: 532 SGKSDVYSYGMLLLEMI 548
K DV+S ++L M+
Sbjct: 269 DAKVDVWSSCCMMLHML 285
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 338 LSNYSYNDIKKMTN-GFKEKLGTGGYGNVY----KGKFPDGRLVAVKVLEKTSNFSDNFI 392
N D K+T+ F LG G +G V KG L AVK+L+K D+ +
Sbjct: 8 FDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDV 64
Query: 393 NEVATIGRIHHVN----IIHLLGFCCDGSTRA-LIYEYMPNGSLGDLLSREKENLSLKPA 447
R+ + + L C R + EY+ NG GDL+ ++ K
Sbjct: 65 ECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV-NG--GDLMYHIQQVGRFKEP 121
Query: 448 RLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVV 507
+ A +A + +L + I++ D+K NV+LD + K++DFG+ K + + V
Sbjct: 122 HAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--V 176
Query: 508 TMTGPRGTIGYIAPEIFMRNLGNPSGKS-DVYSYGMLLLEMI 548
T GT YIAPEI P GKS D +++G+LL EM+
Sbjct: 177 TTKXFCGTPDYIAPEIIAY---QPYGKSVDWWAFGVLLYEML 215
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 165
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 219
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 220 NQTVDIWSVGCIMAELL 236
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKV--LEKTSNFS-DNFINEVATIGRI--HHVNIIHL 409
+++G+GG V++ ++ A+K LE+ N + D++ NE+A + ++ H II L
Sbjct: 14 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 73
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ T IY M G++ DL S K+ S+ P + A+ +H +
Sbjct: 74 YDYEI---TDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QH 126
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
I+H D+KP N L+ D K+ DFG+A + + V GT+ Y+ PE
Sbjct: 127 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 166
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 220
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 221 NQTVDIWSVGCIMAELL 237
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 29/206 (14%)
Query: 356 KLGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFSDN--FINEVATIGRIHHVN-IIHLLG 411
++G+G G V+K +F G ++AVK + ++ N +N + ++ + + H I+ G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELR 470
+ + E M G+ + L + + P R+L ++ + + A+ YL +
Sbjct: 92 TFITNTDVFIAMELM--GTCAEKLKKRMQGPI--PERILGKMTVAIVKALYYLKE--KHG 145
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFG----LAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
++H D+KP N+LLD K+ DFG L +++RS G Y+APE
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA-------GCAAYMAPERI-- 196
Query: 527 NLGNPSG-----KSDVYSYGMLLLEM 547
+ +P+ ++DV+S G+ L+E+
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVEL 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 169
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 223
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 224 NQTVDIWSVGCIMAELL 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 152
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + MTG T Y APEI M N +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 206
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 207 NQTVDIWSVGCIMAELL 223
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 355 EKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNI 406
E+LG+G + V K + G A K ++K + + + EV+ + ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 407 IHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNG 466
I L + + LI E + G L D L+ +KE+LS + A + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEAT--SFIKQILDGVNYLHTK 134
Query: 467 CELRILHLDIKPQNVLLDPDFTP----KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
+I H D+KP+N++L P K+ DFGLA V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
Query: 523 IFMRNLGNPSGKSDVYSYGML 543
I N ++D++S G++
Sbjct: 189 IV--NYEPLGLEADMWSIGVI 207
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 393 NEVATIGRIHHVNIIHLLGFCCDGSTRAL--IYEYMPNGSLGDLLSREKENLSLKPARLL 450
E+A + ++ H N++ L+ D + L ++E + G + ++ + + LS AR
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP--LSEDQARFY 142
Query: 451 EIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMT 510
L IEYLH +I+H DIKP N+L+ D K++DFG++ + ++++ T
Sbjct: 143 FQDL--IKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 511 GPRGTIGYIAPEIFMRNLGNPSGKS-DVYSYGMLL 544
GT ++APE SGK+ DV++ G+ L
Sbjct: 198 --VGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ ++ L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGL + H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDSELKILDFGLCR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 47/232 (20%)
Query: 357 LGTGGYGNVYKGKFP-DGRLVAVK-VLEKTSNFSD--NFINEVATIGRIHHVNIIHLLGF 412
+GTG YG+V + + R+VA+K +L + D + E+A + R++H +++ +L
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIAL-----GVAHAIEYLHNGC 467
Y+ + ++ + + L P L E+ + + ++Y+H+
Sbjct: 121 VIPKDVEKFDELYV----VLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG 176
Query: 468 ELRILHLDIKPQNVLLDPDFTPKVSDFGLAKA--------------------------HS 501
ILH D+KP N L++ D + KV DFGLA+ H+
Sbjct: 177 ---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT 233
Query: 502 RNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGML---LLEMIEE 550
+N +TG T Y APE+ + N + DV+S G + LL MI+E
Sbjct: 234 KNLK-RQLTGHVVTRWYRAPELILLQ-ENYTEAIDVWSIGCIFAELLNMIKE 283
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ +G L + + L + + ++Y+H+ +LH
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 167
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 226
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + M G T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MAGFVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + M G T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MAGFVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGR----LVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG V+K K + L V++ + + + E+ + + H NI+ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
L++E+ + L + N L P + + + + H+
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEI-FMRNLG 529
+LH D+KPQN+L++ + K++DFGLA+A V + T+ Y P++ F L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFG--IPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRP 556
+ S D++S G + E+ + L P
Sbjct: 180 STS--IDMWSAGCIFAELANAARPLFP 204
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 355 EKLGTGGYGNVYK-GKFPDGRLVAVKVLEKT---SNFSDNFINEV---ATIGRIHHVNII 407
EK+G+G +G+V+K K DG + A+K +K S N + EV A +G+ H +++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVV 72
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNG 466
+ + EY GSL D +S +S K A L ++ L V + Y+H+
Sbjct: 73 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS- 131
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVS 492
+ ++H+DIKP N+ + P +
Sbjct: 132 --MSLVHMDIKPSNIFISRTSIPNAA 155
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 166
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + M G T Y APEI M N +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MXGXVATRWYRAPEI-MLNWMHY 220
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 221 NQTVDIWSVGCIMAELL 237
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 355 EKLGTGGYGNVYK-GKFPDGRLVAVKVLEKT---SNFSDNFINEV---ATIGRIHHVNII 407
EK+G+G +G+V+K K DG + A+K +K S N + EV A +G+ H +++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVV 72
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNG 466
+ + EY GSL D +S +S K A L ++ L V + Y+H+
Sbjct: 73 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS- 131
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVS 492
+ ++H+DIKP N+ + P +
Sbjct: 132 --MSLVHMDIKPSNIFISRTSIPNAA 155
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ D+GLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDYGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V VA+K + + + + E+ + R H N+I +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ A+ Y+ + L + ++ L + + ++Y+H+ +LH
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA---NVLH 167
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+L++ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 168 RDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGY-T 226
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 88/240 (36%), Gaps = 51/240 (21%)
Query: 353 FKEKLGTGGYGNVYKGKFPDGRLV-AVKVLEKTSNFSDN------FINEVATIGRIHHVN 405
K +G G YG V R + A+K++ K N EV + ++HH N
Sbjct: 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPN 89
Query: 406 IIHLLGFCCDGSTRALIYEYMPNGSLGDLLS----------------------------- 436
I L D L+ E G L D L+
Sbjct: 90 IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 437 --------REKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLL--DPD 486
RE + + + I + A+ YLHN I H DIKP+N L +
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKS 206
Query: 487 FTPKVSDFGLAKAHSR--NRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
F K+ DFGL+K + N MT GT ++APE+ + K D +S G+LL
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 355 EKLGTGGYGNVYK-GKFPDGRLVAVKVLEKT---SNFSDNFINEV---ATIGRIHHVNII 407
EK+G+G +G+V+K K DG + A+K +K S N + EV A +G+ H +++
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVV 74
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNG 466
+ + EY GSL D +S +S K A L ++ L V + Y+H+
Sbjct: 75 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS- 133
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVS 492
+ ++H+DIKP N+ + P +
Sbjct: 134 --MSLVHMDIKPSNIFISRTSIPNAA 157
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 355 EKLGTGGYGNVYK-GKFPDGRLVAVKVLEKT---SNFSDNFINEV---ATIGRIHHVNII 407
EK+G+G +G+V+K K DG + A+K +K S N + EV A +G+ H +++
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVV 70
Query: 408 HLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLS-LKPARLLEIALGVAHAIEYLHNG 466
+ + EY GSL D +S +S K A L ++ L V + Y+H+
Sbjct: 71 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS- 129
Query: 467 CELRILHLDIKPQNVLLDPDFTPKVS 492
+ ++H+DIKP N+ + P +
Sbjct: 130 --MSLVHMDIKPSNIFISRTSIPNAA 153
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 142
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + M G T Y APEI M N +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MAGFVATRWYRAPEI-MLNWMHY 196
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 197 NQTVDIWSVGCIMAELL 213
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 137/340 (40%), Gaps = 88/340 (25%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 408 HLLG--------------FCCDGST----RALIYEYMPNGSLG---------------DL 434
+LLG FC G+ R+ E++P + G DL
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 147
Query: 435 LSR----------------EKENLS-----LKPARLLEIALGVAHAIEY---LHNGCEL- 469
R E+++LS P L + L + H I Y + G E
Sbjct: 148 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 207
Query: 470 ---RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE-IFM 525
+ +H D+ +N+LL K+ DFGLA+ ++ V R + ++APE IF
Sbjct: 208 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 267
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKED 585
R + +SDV+S+G+LL E+ S Y I ++ + KE
Sbjct: 268 RVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKIDEEFCRRLKEG 310
Query: 586 FVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
D +M L C P RP+ + +VE L +
Sbjct: 311 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 350
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 137/340 (40%), Gaps = 88/340 (25%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 408 HLLG--------------FCCDGST----RALIYEYMPNGSLG---------------DL 434
+LLG FC G+ R+ E++P + G DL
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 154
Query: 435 LSR----------------EKENLS-----LKPARLLEIALGVAHAIEY---LHNGCEL- 469
R E+++LS P L + L + H I Y + G E
Sbjct: 155 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 214
Query: 470 ---RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE-IFM 525
+ +H D+ +N+LL K+ DFGLA+ ++ V R + ++APE IF
Sbjct: 215 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 274
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKED 585
R + +SDV+S+G+LL E+ S Y I ++ + KE
Sbjct: 275 RVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKIDEEFCRRLKEG 317
Query: 586 FVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
D +M L C P RP+ + +VE L +
Sbjct: 318 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 357
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 137/340 (40%), Gaps = 88/340 (25%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 408 HLLG--------------FCCDGST----RALIYEYMPNGSLG---------------DL 434
+LLG FC G+ R+ E++P + G DL
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 156
Query: 435 LSR----------------EKENLS-----LKPARLLEIALGVAHAIEY---LHNGCEL- 469
R E+++LS P L + L + H I Y + G E
Sbjct: 157 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 216
Query: 470 ---RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE-IFM 525
+ +H D+ +N+LL K+ DFGLA+ ++ V R + ++APE IF
Sbjct: 217 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 276
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKED 585
R + +SDV+S+G+LL E+ S Y I ++ + KE
Sbjct: 277 RVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKIDEEFCRRLKEG 319
Query: 586 FVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
D +M L C P RP+ + +VE L +
Sbjct: 320 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 359
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGRLVAVKV--LEKTSNFS-DNFINEVATIGRI--HHVNIIHL 409
+++G+GG V++ ++ A+K LE+ N + D++ NE+A + ++ H II L
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ T IY M G++ DL S K+ S+ P + A+ +H +
Sbjct: 122 YDYEI---TDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QH 174
Query: 470 RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
I+H D+KP N L+ D K+ DFG+A + + V G + Y+ PE
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE 226
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 137/340 (40%), Gaps = 88/340 (25%)
Query: 357 LGTGGYGNVYKG------KFPDGRLVAVKVLEKTSNFSDN--FINEVATIGRI-HHVNII 407
LG G +G V + K R VAVK+L++ + S++ ++E+ + I HH+N++
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 408 HLLG--------------FCCDGST----RALIYEYMPNGSLG---------------DL 434
+LLG FC G+ R+ E++P + G DL
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 149
Query: 435 LSR----------------EKENLS-----LKPARLLEIALGVAHAIEY---LHNGCEL- 469
R E+++LS P L + L + H I Y + G E
Sbjct: 150 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 209
Query: 470 ---RILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE-IFM 525
+ +H D+ +N+LL K+ DFGLA+ ++ V R + ++APE IF
Sbjct: 210 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 269
Query: 526 RNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKED 585
R + +SDV+S+G+LL E+ S Y I ++ + KE
Sbjct: 270 RVY---TIQSDVWSFGVLLWEIF--------------SLGASPYPGVKIDEEFCRRLKEG 312
Query: 586 FVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSS 625
D +M L C P RP+ + +VE L +
Sbjct: 313 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 352
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGS 430
R VA+K L + + E+ + ++H NII LL T +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 431 LGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPK 490
L D + + L R+ + + I++LH+ I+H D+KP N+++ D T K
Sbjct: 110 LMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLK 166
Query: 491 VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEE 550
+ DFGLA+ + MT T Y APE+ + +G D++S G ++ EM+
Sbjct: 167 ILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIMGEMVRH 221
Query: 551 K 551
K
Sbjct: 222 K 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 358 GTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCDG 416
G G +G V GK G VA+K + + F + + + + +HH NI+ L +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTL 91
Query: 417 STR-------ALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
R ++ EY+P+ + + ++ P + + +I LH +
Sbjct: 92 GERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SV 150
Query: 470 RILHLDIKPQNVLL-DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNL 528
+ H DIKP NVL+ + D T K+ DFG AK S + V R Y APE+ N
Sbjct: 151 NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR---YYRAPELIFGN- 206
Query: 529 GNPSGKSDVYSYGMLLLEMI 548
+ + D++S G + EM+
Sbjct: 207 QHYTTAVDIWSVGCIFAEMM 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 169
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DFGLA+ H+ + M G T Y APEI M N +
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MXGYVATRWYRAPEI-MLNWMHY 223
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 224 NQTVDIWSVGCIMAELL 240
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 356 KLGTGGYGNVYKGKFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGFCCD 415
+LG G +G V++ + + + K E+ + I+ L G +
Sbjct: 81 RLGRGSFGEVHRM---EDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVRE 137
Query: 416 GSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLD 475
G + E + GSLG L+ KE L R L +EYLH+ RILH D
Sbjct: 138 GPWVNIFMELLEGGSLGQLV---KEQGCLPEDRALYYLGQALEGLEYLHS---RRILHGD 191
Query: 476 IKPQNVLLDPDFT-PKVSDFGLA---KAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+K NVLL D + + DFG A + + ++T GT ++APE+ + +
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGR--SC 249
Query: 532 SGKSDVYSYGMLLLEMI 548
K DV+S ++L M+
Sbjct: 250 DAKVDVWSSCCMMLHML 266
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ DF LA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFYLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 114 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 170
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K++DFG AK + + S+ T P T Y+APE+ + S D++S G+++
Sbjct: 171 AILKLTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGPEKYDKS--CDMWSLGVIM 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGS 430
R VA+K L + + E+ + ++H NII LL T +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 431 LGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPK 490
L D + + L R+ + + I++LH+ I+H D+KP N+++ D T K
Sbjct: 110 LMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLK 166
Query: 491 VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEE 550
+ DFGLA+ + MT T Y APE+ + +G D++S G ++ EM+
Sbjct: 167 ILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIMGEMVRH 221
Query: 551 K 551
K
Sbjct: 222 K 222
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 104 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 160
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K++DFG AK + + S+ T P T Y+APE+ + S D++S G+++
Sbjct: 161 AILKLTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGPEKYDKS--CDMWSLGVIM 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 106 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 162
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K++DFG AK + + S+ T P T Y+APE+ + S D++S G+++
Sbjct: 163 AILKLTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGPEKYDKS--CDMWSLGVIM 215
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 100 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 156
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K++DFG AK + + S+ T P T Y+APE+ + S D++S G+++
Sbjct: 157 AILKLTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGPEKYDKS--CDMWSLGVIM 209
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 99 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 155
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K++DFG AK + + S+ T P T Y+APE+ + S D++S G+++
Sbjct: 156 AILKLTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGPEKYDKS--CDMWSLGVIM 208
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 105 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 161
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K++DFG AK + + S+ T P T Y+APE+ + S D++S G+++
Sbjct: 162 AILKLTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGPEKYDKS--CDMWSLGVIM 214
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 98 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 154
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K++DFG AK + + S+ T P T Y+APE+ + S D++S G+++
Sbjct: 155 AILKLTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGPEKYDKS--CDMWSLGVIM 207
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 98 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 154
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K++DFG AK + + S +T P T Y+APE+ + S D++S G+++
Sbjct: 155 AILKLTDFGFAKETTSHNS---LTEPCYTPYYVAPEVLGPEKYDKS--CDMWSLGVIM 207
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 150 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 206
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K++DFG AK + + S+ T P T Y+APE+ + S D++S G+++
Sbjct: 207 AILKLTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGPEKYDKS--CDMWSLGVIM 259
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 144 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 200
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K++DFG AK + + S+ T P T Y+APE+ + S D++S G+++
Sbjct: 201 AILKLTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGPEKYDKS--CDMWSLGVIM 253
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 357 LGTGGYGNV---YKGKFPDGRLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLL 410
+G+G G V Y R VA+K L + + E+ + ++H NII LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
T + L D + + L R+ + + I++LH+
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG--- 146
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGN 530
I+H D+KP N+++ D T K+ DFGLA+ + MT T Y APE+ + +G
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGY 202
Query: 531 PSGKSDVYSYGMLLLEMIEEK 551
D++S G ++ EM+ K
Sbjct: 203 KEN-VDIWSVGCIMGEMVRHK 222
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 100 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 156
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
K++DFG AK + + S+ T P T Y+APE+ + S D++S G+++
Sbjct: 157 AILKLTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGPEKYDKS--CDMWSLGVIM 209
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ FGLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILGFGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 147
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 206
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGS 430
R VA+K L + + E+ + ++H NII LL T +
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 102
Query: 431 LGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPK 490
L D + + L R+ + + I++LH+ I+H D+KP N+++ D T K
Sbjct: 103 LMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLK 159
Query: 491 VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEE 550
+ DFGLA+ + MT T Y APE+ + +G D++S G ++ EM+
Sbjct: 160 ILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIMGEMVRH 214
Query: 551 K 551
K
Sbjct: 215 K 215
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ D GLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDAGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 151
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 210
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 147
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 206
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 149
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 208
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 209 KSIDIWSVGCILAEMLSNR 227
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 355 EKLGTGGYGNVYKGKFPDGR----LVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLL 410
EK+G G YG V+K K + L V++ + + + E+ + + H NI+ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 411 GFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
L++E+ + L + N L P + + + + H+
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 471 ILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEI-FMRNLG 529
+LH D+KPQN+L++ + K+++FGLA+A V + T+ Y P++ F L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFG--IPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 530 NPSGKSDVYSYGMLLLEMIEEKKHLRP 556
+ S D++S G + E+ + L P
Sbjct: 180 STS--IDMWSAGCIFAELANAGRPLFP 204
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 432 GDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD---PD 486
G+L SR ++ + + EI + AI+YLH+ + I H D+KP+N+L P+
Sbjct: 144 GELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 200
Query: 487 FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
K++DFG AK + + S +T P T Y+APE+
Sbjct: 201 AILKLTDFGFAKETTSHNS---LTTPCYTPYYVAPEVL 235
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRA------LIYE 424
R VA+K L + + E+ + ++H NII LL T L+ E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 425 YMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD 484
M + +L ++ E L R+ + + I++LH+ I+H D+KP N+++
Sbjct: 110 LM-DANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK 160
Query: 485 PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
D T K+ DFGLA+ + MT T Y APE+ + +G D++S G ++
Sbjct: 161 SDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIM 215
Query: 545 LEMIEEK 551
EM+ K
Sbjct: 216 GEMVRHK 222
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 155
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 214
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 215 KSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 147
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 206
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ D GLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDRGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 151
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 210
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 18/204 (8%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 414 CDGSTRALIYEYMPNGSL-GDLLSREKENL----SLKPARLLEIALGVAHAIEYLHNGCE 468
+ RA E M + + DL+ + L L + + ++Y+H+
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA-- 147
Query: 469 LRILHLDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
+LH D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + +
Sbjct: 148 -NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 528 LGNPSGKSDVYSYGMLLLEMIEEK 551
G + D++S G +L EM+ +
Sbjct: 207 KGY-TKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 152
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 211
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 212 KSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 153
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 212
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 213 KSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 144
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 203
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 204 KSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 151
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 210
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 147
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 206
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 118/259 (45%), Gaps = 35/259 (13%)
Query: 349 MTNGFK--EKLGTGGYGNVYKG-KFPDGRLVAVKVL--EKTSNFSDNFINEVATIGRI-H 402
MT+ ++ E +G G + V + K G A K++ +K S + A I R+
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 403 HVNIIHLLGFCCDGSTRALIYEYMPNGSL-GDLLSREKENLSLKPARLLEIALGVAHAIE 461
H NI+ L + L+++ + G L D+++RE + + + +I V H
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC-- 119
Query: 462 YLHNGCELRILHLDIKPQNVLLDPD---FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGY 518
++ ++H D+KP+N+LL K++DFGLA ++ G GT GY
Sbjct: 120 -----HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGY 172
Query: 519 IAPEIFMRN-LGNPSGKSDVYSYGMLLLEMI-------EEKKHLRPTETTSGSNTTEAYF 570
++PE+ + G P D+++ G++L ++ +E +H + +G+ +
Sbjct: 173 LSPEVLRKEAYGKP---VDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPS-- 227
Query: 571 PDWIYDKLIQPEKEDFVEE 589
P+W + PE ++ + +
Sbjct: 228 PEW---DTVTPEAKNLINQ 243
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 145
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 204
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 205 KSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 145
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 204
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 205 KSIDIWSVGCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 167
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 226
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 147
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 206
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEKTSN---FSDNFINEVATIGRIHHVNIIHLLG- 411
+G+G YG+V G VAVK L + + E+ + + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 412 FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRI 471
F S Y+ +G L+ + L + + + ++Y+H+ I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DI 146
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP N+ ++ D K+ D GLA+ H+ + MTG T Y APEI M N +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDGGLAR-HTDDE----MTGYVATRWYRAPEI-MLNWMHY 200
Query: 532 SGKSDVYSYGMLLLEMI 548
+ D++S G ++ E++
Sbjct: 201 NQTVDIWSVGCIMAELL 217
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 33/249 (13%)
Query: 355 EKLGTGGYGNVYK-GKFPDGRLVAVKVL--EKTSNFSDNFINEVATIGRI-HHVNIIHLL 410
E+LG G + V + K G+ A ++ +K S + A I R+ H NI+ L
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 411 GFCCDGSTRALIYEYMPNGSL-GDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ LI++ + G L D+++RE + + + +I V H ++
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC-------HQM 129
Query: 470 RILHLDIKPQNVLLDPDF---TPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
++H ++KP+N+LL K++DFGLA + G GT GY++PE+ +
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRK 187
Query: 527 NLGNPSGKS-DVYSYGMLLLEMI-------EEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
+P GK D+++ G++L ++ +E +H + +G+ + P+W
Sbjct: 188 ---DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS--PEW---DT 239
Query: 579 IQPEKEDFV 587
+ PE +D +
Sbjct: 240 VTPEAKDLI 248
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 11/198 (5%)
Query: 356 KLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDN--FINEVATIGRIHHVNIIHLLGF 412
+LG G YG V K + P G++ AVK + T N + + ++ R
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLL-EIALGVAHAIEYLHNGCELRI 471
I + + SL + + P +L +IA+ + A+E+LH+ +L +
Sbjct: 101 ALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 158
Query: 472 LHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNP 531
+H D+KP NVL++ K DFG++ + V G Y APE L
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDD---VAKDIDAGCKPYXAPERINPELNQK 215
Query: 532 --SGKSDVYSYGMLLLEM 547
S KSD++S G+ +E+
Sbjct: 216 GYSVKSDIWSLGITXIEL 233
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 42/255 (16%)
Query: 354 KEKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFIN---EVATIGRIHHVNIIHL 409
KE+LG G + V + G A K++ + +F E ++ H NI+ L
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 410 LGFCCDGSTRALIYEYMPNGSL-GDLLSRE---KENLSLKPARLLEIALGVAHAIEYLH- 464
+ S L+++ + G L D+++RE + + S ++LE +I Y H
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------SIAYCHS 123
Query: 465 NGCELRILHLDIKPQNVLLDPD---FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
NG I+H ++KP+N+LL K++DFGLA + + + G GT GY++P
Sbjct: 124 NG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSP 176
Query: 522 EIFMRNLGNPSGKS-DVYSYGMLLLEMI-------EEKKHLRPTETTSGSNTTEAYFPDW 573
E+ + +P K D+++ G++L ++ +E +H + +G+ + P+W
Sbjct: 177 EVLKK---DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS--PEW 231
Query: 574 IYDKLIQPEKEDFVE 588
+ PE + ++
Sbjct: 232 ---DTVTPEAKSLID 243
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 11/177 (6%)
Query: 376 VAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLG 432
VAVK L + + E+ + ++H NII LL T + L
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 433 DLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVS 492
D + ++ L R+ + + I++LH+ I+H D+KP N+++ D T K+
Sbjct: 112 DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKIL 168
Query: 493 DFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
DFGLA+ N MT T Y APE+ + +G + D++S G ++ E+++
Sbjct: 169 DFGLARTACTN---FMMTPYVVTRYYRAPEVIL-GMGY-AANVDIWSVGCIMGELVK 220
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA++ + + + + E+ + R H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 151
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 210
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 354 KEKLGTGGYGNVYKG-KFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
K+ LG G G V + G+ A+K+L + + G H V I+ +
Sbjct: 15 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYEN 74
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G LI G G+L SR E+ + + EI + AI++LH+
Sbjct: 75 MHHGKRCLLIIMECMEG--GELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---N 129
Query: 471 ILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I H D+KP+N+L + D K++DFG AK ++N + P T Y+APE+
Sbjct: 130 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPE 185
Query: 528 LGNPSGKSDVYSYGMLL 544
+ S D++S G+++
Sbjct: 186 KYDKS--CDMWSLGVIM 200
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 42/255 (16%)
Query: 354 KEKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFIN---EVATIGRIHHVNIIHL 409
KE+LG G + V + G A K++ + +F E ++ H NI+ L
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 410 LGFCCDGSTRALIYEYMPNGSL-GDLLSRE---KENLSLKPARLLEIALGVAHAIEYLH- 464
+ S L+++ + G L D+++RE + + S ++LE +I Y H
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------SIAYCHS 122
Query: 465 NGCELRILHLDIKPQNVLLDPD---FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
NG I+H ++KP+N+LL K++DFGLA + + + G GT GY++P
Sbjct: 123 NG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSP 175
Query: 522 EIFMRNLGNPSGKS-DVYSYGMLLLEMI-------EEKKHLRPTETTSGSNTTEAYFPDW 573
E+ + +P K D+++ G++L ++ +E +H + +G+ + P+W
Sbjct: 176 EVLKK---DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS--PEW 230
Query: 574 IYDKLIQPEKEDFVE 588
+ PE + ++
Sbjct: 231 ---DTVTPEAKSLID 242
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 11/177 (6%)
Query: 376 VAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLG 432
VAVK L + + E+ + ++H NII LL T + L
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 433 DLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVS 492
D + ++ L R+ + + I++LH+ I+H D+KP N+++ D T K+
Sbjct: 110 DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKIL 166
Query: 493 DFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
DFGLA+ S N MT T Y APE+ + +G D++S G ++ E+++
Sbjct: 167 DFGLARTASTN---FMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIMGELVK 218
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRA------LIYE 424
R VA+K L + + E+ + ++H NII LL T L+ E
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 425 YMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD 484
M + +L ++ E L R+ + + I++LH+ I+H D+KP N+++
Sbjct: 148 LM-DANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK 198
Query: 485 PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
D T K+ DFGLA+ + MT T Y APE+ + +G D++S G ++
Sbjct: 199 SDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIM 253
Query: 545 LEMIEEK 551
EM+ K
Sbjct: 254 GEMVRHK 260
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 23/185 (12%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLG-FCCDGSTRA-----LIYE 424
R VA+K L + + E+ + ++H NII LL F S ++ E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 425 YMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD 484
M + +L ++ E ++ + L ++ +G+ H LH+ I+H D+KP N+++
Sbjct: 110 LM-DANLSQVIQMELDHERMS-YLLYQMLVGIKH----LHSAG---IIHRDLKPSNIVVK 160
Query: 485 PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
D T K+ DFGLA+ + MT T Y APE+ + +G D++S G+++
Sbjct: 161 SDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGVIM 215
Query: 545 LEMIE 549
EMI+
Sbjct: 216 GEMIK 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 23/185 (12%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLG-FCCDGSTRA-----LIYE 424
R VA+K L + + E+ + ++H NII LL F S ++ E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 425 YMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD 484
M + +L ++ E ++ + L ++ +G+ H LH+ I+H D+KP N+++
Sbjct: 110 LM-DANLSQVIQMELDHERMS-YLLYQMLVGIKH----LHSAG---IIHRDLKPSNIVVK 160
Query: 485 PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
D T K+ DFGLA+ + MT T Y APE+ + +G D++S G+++
Sbjct: 161 SDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGVIM 215
Query: 545 LEMIE 549
EMI+
Sbjct: 216 GEMIK 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 19/181 (10%)
Query: 377 AVKVLEKT-SNFSDNFINEVATIGRIH-HVNIIHLLGFCCDGSTRALIYEYMPNGSLGDL 434
AVK++EK + EV + + H N++ L+ F + L++E M GS+
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 435 LSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDP--DFTP-KV 491
+ + + L+ + +++ VA A+++LHN I H D+KP+N+L + +P K+
Sbjct: 102 IHKRRHFNELEASVVVQ---DVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKI 155
Query: 492 SDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEI---FMRNLGNPSGKSDVYSYGML 543
DFGL N ++ P G+ Y+APE+ F + D++S G++
Sbjct: 156 CDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215
Query: 544 L 544
L
Sbjct: 216 L 216
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 373 GRLVAVKVLEKTSNFS-------DNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEY 425
G+ AVK+++ + F+ ++ E + + H +I+ LL +++E+
Sbjct: 49 GQQFAVKIVD-VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107
Query: 426 MPNGSL-GDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLL- 483
M L +++ R A + A+ Y H+ I+H D+KP+NVLL
Sbjct: 108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPENVLLA 164
Query: 484 -DPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS-DVYSY 540
+ P K+ DFG+A S + G GT ++APE+ R P GK DV+
Sbjct: 165 SKENSAPVKLGDFGVAI--QLGESGLVAGGRVGTPHFMAPEVVKR---EPYGKPVDVWGC 219
Query: 541 GMLLLEMI 548
G++L ++
Sbjct: 220 GVILFILL 227
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 125/272 (45%), Gaps = 44/272 (16%)
Query: 339 SNYSYNDIKKMTNGF--KEKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFIN-- 393
S + N K ++ + KE+LG G + V + G A K++ + +F
Sbjct: 17 SEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE 76
Query: 394 -EVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSL-GDLLSRE---KENLSLKPAR 448
E ++ H NI+ L + S L+++ + G L D+++RE + + S +
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 136
Query: 449 LLEIALGVAHAIEYLH-NGCELRILHLDIKPQNVLLDPD---FTPKVSDFGLAKAHSRNR 504
+LE +I Y H NG I+H ++KP+N+LL K++DFGLA + +
Sbjct: 137 ILE-------SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 185
Query: 505 SVVTMTGPRGTIGYIAPEIFMRNLGNPSGKS-DVYSYGMLLLEMI-------EEKKHLRP 556
+ G GT GY++PE+ + +P K D+++ G++L ++ +E +H
Sbjct: 186 A---WHGFAGTPGYLSPEVLKK---DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 239
Query: 557 TETTSGSNTTEAYFPDWIYDKLIQPEKEDFVE 588
+ +G+ + P+W + PE + ++
Sbjct: 240 AQIKAGAYDYPS--PEW---DTVTPEAKSLID 266
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 354 KEKLGTGGYGNVYKG-KFPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVNIIHLLGF 412
K+ LG G G V + G+ A+K+L + + G H V I+ +
Sbjct: 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYEN 93
Query: 413 CCDGSTRALIYEYMPNGSLGDLLSR--EKENLSLKPARLLEIALGVAHAIEYLHNGCELR 470
G LI G G+L SR E+ + + EI + AI++LH+
Sbjct: 94 MHHGKRCLLIIMECMEG--GELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---N 148
Query: 471 ILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRN 527
I H D+KP+N+L + D K++DFG AK ++N + P T Y+APE+
Sbjct: 149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPE 204
Query: 528 LGNPSGKSDVYSYGMLL 544
+ S D++S G+++
Sbjct: 205 KYDKS--CDMWSLGVIM 219
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 33/251 (13%)
Query: 355 EKLGTGGYGNVYK--GKFPDGRLVAVKV-LEKTSNFSDNFINEVATIGRI-HHVNIIHLL 410
E+LG G + V + K P A + +K S + A I R+ H NI+ L
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 411 GFCCDGSTRALIYEYMPNGSL-GDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ L+++ + G L D+++RE + + + +I V H ++
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH------- 149
Query: 470 RILHLDIKPQNVLLDPD---FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I+H D+KP+N+LL K++DFGLA + G GT GY++PE+ +
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ--AWFGFAGTPGYLSPEVLRK 207
Query: 527 NLGNPSGKS-DVYSYGMLLLEMI-------EEKKHLRPTETTSGSNTTEAYFPDWIYDKL 578
+P GK D+++ G++L ++ +E +H + +G+ + P+W
Sbjct: 208 ---DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPS--PEW---DT 259
Query: 579 IQPEKEDFVEE 589
+ PE ++ + +
Sbjct: 260 VTPEAKNLINQ 270
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 151
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + + T Y APEI + + G +
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGY-T 210
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRA------LIYE 424
R VA+K L + + E+ + ++H NII LL T L+ E
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 425 YMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD 484
M + +L ++ E L R+ + + I++LH+ I+H D+KP N+++
Sbjct: 148 LM-DANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK 198
Query: 485 PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
D T K+ DFGLA+ + MT T Y APE+ + +G D++S G ++
Sbjct: 199 SDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIM 253
Query: 545 LEMIEEK 551
EM+ K
Sbjct: 254 GEMVRHK 260
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + R H NII +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 152
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + + T Y APEI + + G +
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGY-T 211
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 212 KSIDIWSVGCILAEMLSNR 230
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 357 LGTGGYGNV---YKGKFPDGRLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLL 410
+G+G G V Y R VA+K L + + E+ + ++H NII LL
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 411 GFCCDGSTRA------LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
T L+ E M + +L ++ E L R+ + + I++LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME-----LDHERMSYLLYQMLCGIKHLH 144
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ I+H D+KP N+++ D T K+ DFGLA+ + MT T Y APE+
Sbjct: 145 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 198
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEK 551
+ +G D++S G ++ EM+ K
Sbjct: 199 L-GMGYKEN-VDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 357 LGTGGYGNV---YKGKFPDGRLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLL 410
+G+G G V Y R VA+K L + + E+ + ++H NII LL
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 411 GFCCDGSTRA------LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
T L+ E M + +L ++ E L R+ + + I++LH
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME-----LDHERMSYLLYQMLCGIKHLH 142
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ I+H D+KP N+++ D T K+ DFGLA+ + MT T Y APE+
Sbjct: 143 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 196
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEK 551
+ +G D++S G ++ EM+ K
Sbjct: 197 L-GMGYKEN-VDIWSVGCIMGEMVRHK 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 357 LGTGGYGNV---YKGKFPDGRLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLL 410
+G+G G V Y R VA+K L + + E+ + ++H NII LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 411 GFCCDGSTRA------LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
T L+ E M + +L ++ E L R+ + + I++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME-----LDHERMSYLLYQMLCGIKHLH 143
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ I+H D+KP N+++ D T K+ DFGLA+ + MT T Y APE+
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEK 551
+ +G D++S G ++ EM+ K
Sbjct: 198 L-GMGYKEN-VDIWSVGCIMGEMVRHK 222
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 357 LGTGGYGNV---YKGKFPDGRLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLL 410
+G+G G V Y R VA+K L + + E+ + ++H NII LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 411 GFCCDGSTRA------LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
T L+ E M + +L ++ E L R+ + + I++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME-----LDHERMSYLLYQMLCGIKHLH 143
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ I+H D+KP N+++ D T K+ DFGLA+ + MT T Y APE+
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEK 551
+ +G D++S G ++ EM+ K
Sbjct: 198 L-GMGYKEN-VDIWSVGCIMGEMVRHK 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 42/255 (16%)
Query: 354 KEKLGTGGYGNVYKGKFPD-GRLVAVKVLEKTSNFSDNFIN---EVATIGRIHHVNIIHL 409
KE+LG G + V + G A K++ + +F E ++ H NI+ L
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 410 LGFCCDGSTRALIYEYMPNGSL-GDLLSRE---KENLSLKPARLLEIALGVAHAIEYLH- 464
+ S L+++ + G L D+++RE + + S ++LE +I Y H
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------SIAYCHS 123
Query: 465 NGCELRILHLDIKPQNVLLDPD---FTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAP 521
NG I+H ++KP+N+LL K++DFGLA + + + G GT GY++P
Sbjct: 124 NG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSP 176
Query: 522 EIFMRNLGNPSGKS-DVYSYGMLLLEMI-------EEKKHLRPTETTSGSNTTEAYFPDW 573
E+ + +P K D+++ G++L ++ +E +H + +G+ + P+W
Sbjct: 177 EVLKK---DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS--PEW 231
Query: 574 IYDKLIQPEKEDFVE 588
+ PE + ++
Sbjct: 232 ---DTVTPEAKSLID 243
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 357 LGTGGYGNV---YKGKFPDGRLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLL 410
+G+G G V Y R VA+K L + + E+ + ++H NII LL
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 411 GFCCDGSTRA------LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
T L+ E M + +L ++ E L R+ + + I++LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME-----LDHERMSYLLYQMLCGIKHLH 144
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ I+H D+KP N+++ D T K+ DFGLA+ + MT T Y APE+
Sbjct: 145 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 198
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEK 551
+ +G D++S G ++ EM+ K
Sbjct: 199 L-GMGYKEN-VDIWSVGCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 357 LGTGGYGNV---YKGKFPDGRLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLL 410
+G+G G V Y R VA+K L + + E+ + ++H NII LL
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 411 GFCCDGSTRA------LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
T L+ E M + +L ++ E L R+ + + I++LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME-----LDHERMSYLLYQMLCGIKHLH 137
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ I+H D+KP N+++ D T K+ DFGLA+ + MT T Y APE+
Sbjct: 138 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 191
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEK 551
+ +G D++S G ++ EM+ K
Sbjct: 192 L-GMGYKEN-VDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRA------LIYE 424
R VA+K L + + E+ + ++H NII LL T L+ E
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 102
Query: 425 YMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD 484
M + +L ++ E L R+ + + I++LH+ I+H D+KP N+++
Sbjct: 103 LM-DANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK 153
Query: 485 PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
D T K+ DFGLA+ + MT T Y APE+ + +G D++S G ++
Sbjct: 154 SDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIM 208
Query: 545 LEMIEEK 551
EM+ K
Sbjct: 209 GEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 357 LGTGGYGNV---YKGKFPDGRLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLL 410
+G+G G V Y R VA+K L + + E+ + ++H NII LL
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 411 GFCCDGSTRA------LIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLH 464
T L+ E M + +L ++ E L R+ + + I++LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME-----LDHERMSYLLYQMLCGIKHLH 137
Query: 465 NGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
+ I+H D+KP N+++ D T K+ DFGLA+ + MT T Y APE+
Sbjct: 138 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 191
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEK 551
+ +G D++S G ++ EM+ K
Sbjct: 192 L-GMGYKEN-VDIWSVGCIMGEMVRHK 216
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 60/254 (23%)
Query: 356 KLGTGGYGNVYKGKF-PDGRLVAVKVLEKTSNFSDN--FINEVATIGRIHHV-NIIHLLG 411
++G G YG+V K P G+++AVK + T + + + ++ + R I+ G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 412 ---------FCCDGSTRAL--IYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAI 460
C + + + Y+Y+ L D++ E L +I L A+
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYV-YSVLDDVIPEEI---------LGKITLATVKAL 138
Query: 461 EYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIA 520
+L L+I+H DIKP N+LLD K+ DFG++ + + T G Y+A
Sbjct: 139 NHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGIS---GQLVDSIAKTRDAGCRPYMA 193
Query: 521 PEIFMRNLGNPSG-------KSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDW 573
PE +PS +SDV+S G+ L E+ T +P W
Sbjct: 194 PERI-----DPSASRQGYDVRSDVWSLGITLYEL----------------ATGRFPYPKW 232
Query: 574 --IYDKLIQPEKED 585
++D+L Q K D
Sbjct: 233 NSVFDQLTQVVKGD 246
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 23/185 (12%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLG-FCCDGSTRA-----LIYE 424
R VA+K L + + E+ + ++H NII LL F S ++ E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 425 YMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLD 484
M + +L ++ E ++ + L ++ +G+ H LH+ I+H D+KP N+++
Sbjct: 110 LM-DANLSQVIQMELDHERMS-YLLYQMLVGIKH----LHSAG---IIHRDLKPSNIVVK 160
Query: 485 PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLL 544
D T K+ DFGLA+ + MT T Y APE+ + +G D++S G ++
Sbjct: 161 SDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIM 215
Query: 545 LEMIE 549
EMI+
Sbjct: 216 GEMIK 220
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 8/199 (4%)
Query: 357 LGTGGYGNVYKGKFPDGRL-VAVKVLE--KTSNFSDNFINEVATIGRIHHVNIIHLLGFC 413
+G G YG V ++ VA+K + + + + E+ + H NII +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 414 CDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILH 473
+ + Y+ + L + + L + + ++Y+H+ +LH
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 149
Query: 474 LDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPS 532
D+KP N+LL+ K+ DFGLA+ A + +T T Y APEI + + G +
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY-T 208
Query: 533 GKSDVYSYGMLLLEMIEEK 551
D++S G +L EM+ +
Sbjct: 209 KSIDIWSVGCILAEMLSNR 227
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 403 HVNIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
H NI+ L D L+ E + NG G+L R K+ I + A+ +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELL-NG--GELFERIKKKKHFSETEASYIMRKLVSAVSH 121
Query: 463 LHNGCELRILHLDIKPQNVLL---DPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYI 519
+H ++ ++H D+KP+N+L + + K+ DFG A+ + + P T+ Y
Sbjct: 122 MH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKTPCFTLHYA 176
Query: 520 APEIFMRNLGNPSGKSDVYSYGMLLLEMI 548
APE+ +N + S D++S G++L M+
Sbjct: 177 APELLNQNGYDES--CDLWSLGVILYTML 203
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 456 VAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAK-AHSRNRSVVTMTGPRG 514
+ ++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ A + +T
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 515 TIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEK 551
T Y APEI + + G + D++S G +L EM+ +
Sbjct: 192 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 227
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGS 430
R VA+K L + + E+ + ++H NII LL + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 431 LGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPK 490
L D + + L R+ + + I++LH+ I+H D+KP N+++ D T K
Sbjct: 110 LMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLK 166
Query: 491 VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+ DFGLA+ + MT T Y APE+ + +G D++S G ++ EMI+
Sbjct: 167 ILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIMGEMIK 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 16/109 (14%)
Query: 421 LIYEYMPNGSLGDLLSREKENLSLKPAR--LLEIALGVAHAIEYLHNGCELRILHLDIKP 478
L+ EY G L LLS+ E + + AR L EI + AI+ +H L +H DIKP
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM----AIDSVHR---LGYVHRDIKP 190
Query: 479 QNVLLDPDFTPKVSDFG---LAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
N+LLD +++DFG +A RS+V + GT Y++PEI
Sbjct: 191 DNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV----GTPDYLSPEIL 235
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 36/238 (15%)
Query: 336 ALLSNYSYNDIKKMTNGFK--EKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNF- 391
ALL S++ + + ++ E +G G YG V + G+ VA+K + + N
Sbjct: 40 ALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK 99
Query: 392 --INEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLG------DLLSRE----- 438
+ E+ + H NII + + ++ +P G DL+ +
Sbjct: 100 RTLRELKILKHFKHDNII---------AIKDILRPTVPYGEFKSVYVVLDLMESDLHQII 150
Query: 439 --KENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGL 496
+ L+L+ R L ++Y+H+ +++H D+KP N+L++ + K+ DFG+
Sbjct: 151 HSSQPLTLEHVRYFLYQL--LRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 205
Query: 497 AKA--HSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKK 552
A+ S MT T Y APE+ M +L + D++S G + EM+ ++
Sbjct: 206 ARGLCTSPAEHQYFMTEYVATRWYRAPEL-MLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGS 430
R VA+K L + + E+ + ++H NII LL + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 431 LGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPK 490
L D + + L R+ + + I++LH+ I+H D+KP N+++ D T K
Sbjct: 110 LMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLK 166
Query: 491 VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+ DFGLA+ + MT T Y APE+ + +G D++S G ++ EMI+
Sbjct: 167 ILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIMGEMIK 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 21/213 (9%)
Query: 357 LGTGGYGNVYKGKFPDGRLVAVKVLEKTSN-------FSDNFI-----NEVATIGRIHHV 404
+ +G YG V G +G VA+K + T + SD+F+ E+ + HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSR--EKENLSLKPARLLEIALGVAHAIEY 462
NI+ L A+ Y+ + L++ + + + P I + H +
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ---HIQYFMYHILLG 146
Query: 463 LHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
LH E ++H D+ P N+LL + + DF LA+ + + + R Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---WYRAPE 203
Query: 523 IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLR 555
+ M+ G + D++S G ++ EM K R
Sbjct: 204 LVMQFKGF-TKLVDMWSAGCVMAEMFNRKALFR 235
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 21/213 (9%)
Query: 357 LGTGGYGNVYKGKFPDGRLVAVKVLEKTSN-------FSDNFI-----NEVATIGRIHHV 404
+ +G YG V G +G VA+K + T + SD+F+ E+ + HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 405 NIIHLLGFCCDGSTRALIYEYMPNGSLGDLLSR--EKENLSLKPARLLEIALGVAHAIEY 462
NI+ L A+ Y+ + L++ + + + P I + H +
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ---HIQYFMYHILLG 146
Query: 463 LHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPE 522
LH E ++H D+ P N+LL + + DF LA+ + + + R Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---WYRAPE 203
Query: 523 IFMRNLGNPSGKSDVYSYGMLLLEMIEEKKHLR 555
+ M+ G + D++S G ++ EM K R
Sbjct: 204 LVMQFKGF-TKLVDMWSAGCVMAEMFNRKALFR 235
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGS 430
R VA+K L + + E+ + ++H NII LL + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 431 LGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPK 490
L D + + L R+ + + I++LH+ I+H D+KP N+++ D T K
Sbjct: 110 LMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 166
Query: 491 VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+ DFGLA+ + MT T Y APE+ + +G D++S G ++ EMI+
Sbjct: 167 ILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIMGEMIK 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGS 430
R VA+K L + + E+ + ++H NII LL + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 431 LGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPK 490
L D + + L R+ + + I++LH+ I+H D+KP N+++ D T K
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 166
Query: 491 VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+ DFGLA+ + MT T Y APE+ + +G D++S G ++ EMI+
Sbjct: 167 ILDFGLARTAG---TSFMMTPEVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIMGEMIK 220
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 377 AVKVLEKT-SNFSDNFINEVATIGRIH-HVNIIHLLGFCCDGSTRALIYEYMPNGSLGDL 434
AVK++EK + EV + + H N++ L+ F + L++E M GS+
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 435 LSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDP--DFTP-KV 491
+ + + L+ + +++ VA A+++LHN I H D+KP+N+L + +P K+
Sbjct: 102 IHKRRHFNELEASVVVQ---DVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKI 155
Query: 492 SDFGLAKAHSRNRSVVTMTGPR-----GTIGYIAPEI---FMRNLGNPSGKSDVYSYGML 543
DF L N ++ P G+ Y+APE+ F + D++S G++
Sbjct: 156 CDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215
Query: 544 L 544
L
Sbjct: 216 L 216
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEK--TSNFSD-----NFINEVATIGRIH--HVNI 406
LG+GG+G+VY G + D VA+K +EK S++ + EV + ++ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 407 IHLLGFCCDGSTRALIYEYM-PNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
I LL + + LI E M P L D ++ E+ L + AR V A+ + HN
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFIT-ERGALQEELAR--SFFWQVLEAVRHCHN 132
Query: 466 GCELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
C +LH DIK +N+L+D + K+ DFG + A ++ T GT Y PE +
Sbjct: 133 -CG--VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD---TVYTDFDGTRVYSPPE-W 184
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMI 548
+R + V+S G+LL +M+
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 47/296 (15%)
Query: 357 LGTGGYGNVYKGK-FPDGRLVAVK-VLEKTSNFSDNFINEVATIGRIH-HVNIIHLLGFC 413
L GG+ VY+ + GR A+K +L + I EV + ++ H NI+ FC
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ---FC 92
Query: 414 C----------DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYL 463
G L+ + G L + L + + L +L+I A++++
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 464 HNGCELRILHLDIKPQNVLLDPDFTPKVSDFGLAKAHS---------RNRSVVTMTGPRG 514
H + I+H D+K +N+LL T K+ DFG A S + R++V R
Sbjct: 153 HRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 515 TIG-YIAPEIFMRNLGNPSG-KSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPD 572
T Y PEI P G K D+++ G +L ++ ++H P E + +
Sbjct: 212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY-LLCFRQH--PFEDGAKLRIVNGKYS- 267
Query: 573 WIYDKLIQPEKEDFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRVVEMLSSASA 628
I P + + R M +Q+NP++R S+ VV L +A
Sbjct: 268 ------IPPHDTQYTVFHS--LIRAM-------LQVNPEERLSIAEVVHQLQEIAA 308
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 36/238 (15%)
Query: 336 ALLSNYSYNDIKKMTNGFK--EKLGTGGYGNVYKGKFP-DGRLVAVKVLEKTSNFSDNF- 391
ALL S++ + + ++ E +G G YG V + G+ VA+K + + N
Sbjct: 39 ALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK 98
Query: 392 --INEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGSLG------DLLSRE----- 438
+ E+ + H NII + + ++ +P G DL+ +
Sbjct: 99 RTLRELKILKHFKHDNII---------AIKDILRPTVPYGEFKSVYVVLDLMESDLHQII 149
Query: 439 --KENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPKVSDFGL 496
+ L+L+ R L ++Y+H+ +++H D+KP N+L++ + K+ DFG+
Sbjct: 150 HSSQPLTLEHVRYFLYQL--LRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204
Query: 497 AKA--HSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIEEKK 552
A+ S MT T Y APE+ M +L + D++S G + EM+ ++
Sbjct: 205 ARGLCTSPAEHQYFMTEYVATRWYRAPEL-MLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGS 430
R VA+K L + + E+ + ++H NII LL + +
Sbjct: 52 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 111
Query: 431 LGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPK 490
L D + + L R+ + + I++LH+ I+H D+KP N+++ D T K
Sbjct: 112 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 168
Query: 491 VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+ DFGLA+ + +V R Y APE+ + +G D++S G ++ EMI+
Sbjct: 169 ILDFGLARTAGTSFMMVPFVVTR---YYRAPEVIL-GMGYKEN-VDIWSVGCIMGEMIK 222
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 17/141 (12%)
Query: 356 KLGTGGYGNVYKGKFPDGR-LVAVKVLEKTSNFSDNFINEVATIGRIHHVN--------I 406
KLG G + V+ G+ VA+KV++ ++++ ++E+ + + + + +
Sbjct: 44 KLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMV 103
Query: 407 IHLLG----FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
+ LL +G+ +++E + + L ++ + L L + +I V ++Y
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVK--KIIQQVLQGLDY 161
Query: 463 LHNGCELRILHLDIKPQNVLL 483
LH C RI+H DIKP+N+LL
Sbjct: 162 LHTKC--RIIHTDIKPENILL 180
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 17/141 (12%)
Query: 356 KLGTGGYGNVYKGKFPDGR-LVAVKVLEKTSNFSDNFINEVATIGRIHHVN--------I 406
KLG G + V+ G+ VA+KV++ ++++ ++E+ + + + + +
Sbjct: 28 KLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMV 87
Query: 407 IHLLG----FCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEY 462
+ LL +G+ +++E + + L ++ + L L + +I V ++Y
Sbjct: 88 VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVK--KIIQQVLQGLDY 145
Query: 463 LHNGCELRILHLDIKPQNVLL 483
LH C RI+H DIKP+N+LL
Sbjct: 146 LHTKC--RIIHTDIKPENILL 164
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGS 430
R VA+K L + + E+ + ++H NII LL + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 431 LGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPK 490
L D + + L R+ + + I++LH+ I+H D+KP N+++ D T K
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 166
Query: 491 VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+ DFGLA+ + MT T Y APE+ + +G D++S G ++ EMI+
Sbjct: 167 ILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIMGEMIK 220
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGS 430
R VA+K L + + E+ + ++H NII LL + +
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110
Query: 431 LGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPK 490
L D + + L R+ + + I++LH+ I+H D+KP N+++ D T K
Sbjct: 111 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 167
Query: 491 VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+ DFGLA+ + MT T Y APE+ + +G D++S G ++ EMI+
Sbjct: 168 ILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIMGEMIK 221
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 356 KLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVN--------- 405
KLG G + V+ K + VA+K++ +++ +E+ + R++ +
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 406 --IIHLLGFCC----DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHA 459
I+ LL +G +++E + L L ++ E+ + + +I+ +
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLA--LIKKYEHRGIPLIYVKQISKQLLLG 143
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTP------KVSDFGLAKAHSRNRSVVTMTGPR 513
++Y+H C I+H DIKP+NVL++ +P K++D G A + + T
Sbjct: 144 LDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-----YTNSI 196
Query: 514 GTIGYIAPEIFMRNLGNPSG-KSDVYSYGMLLLEMIEEKKHLRPTETTS 561
T Y +PE+ LG P G +D++S L+ E+I P E S
Sbjct: 197 QTREYRSPEVL---LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS 242
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 356 KLGTGGYGNVYKGK-FPDGRLVAVKVLEKTSNFSDNFINEVATIGRIHHVN--------- 405
KLG G + V+ K + VA+K++ +++ +E+ + R++ +
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 406 --IIHLLGFCC----DGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHA 459
I+ LL +G +++E + L L ++ E+ + + +I+ +
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLA--LIKKYEHRGIPLIYVKQISKQLLLG 143
Query: 460 IEYLHNGCELRILHLDIKPQNVLLDPDFTP------KVSDFGLAKAHSRNRSVVTMTGPR 513
++Y+H C I+H DIKP+NVL++ +P K++D G A + + T
Sbjct: 144 LDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-----YTNSI 196
Query: 514 GTIGYIAPEIFMRNLGNPSG-KSDVYSYGMLLLEMIEEKKHLRPTETTS 561
T Y +PE+ LG P G +D++S L+ E+I P E S
Sbjct: 197 QTREYRSPEVL---LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS 242
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Query: 374 RLVAVKVLEK---TSNFSDNFINEVATIGRIHHVNIIHLLGFCCDGSTRALIYEYMPNGS 430
R VA+K L + + E+ + ++H NII LL + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 431 LGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDFTPK 490
L D + + L R+ + + I++LH+ I+H D+KP N+++ D T K
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 166
Query: 491 VSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLEMIE 549
+ DFGLA+ + MT T Y APE+ + +G D++S G ++ EMI+
Sbjct: 167 ILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL-GMGYKEN-VDIWSVGCIMGEMIK 220
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 355 EKLGTGGYGNVYKG-KFPDGRLVAVKVLEKTSNFSD---NFINEVATIGRIHHV-NIIHL 409
++LG G + V + G+ A K L+K D ++E+A + +I+L
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 410 LGFCCDGSTRALIYEYMPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCEL 469
+ S LI EY G + L E + + ++ + + + YLH
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEM-VSENDVIRLIKQILEGVYYLHQN--- 150
Query: 470 RILHLDIKPQNVLLD---PDFTPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMR 526
I+HLD+KPQN+LL P K+ DFG+++ + + GT Y+APEI
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR---KIGHACELREIMGTPEYLAPEIL-- 205
Query: 527 NLGNPSGKSDVYSYGML 543
N + +D+++ G++
Sbjct: 206 NYDPITTATDMWNIGII 222
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 46/275 (16%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEK--TSNFSD-----NFINEVATIGRIH--HVNI 406
LG+GG+G+VY G + D VA+K +EK S++ + EV + ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 407 IHLLGFCCDGSTRALIYEY-MPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
I LL + + LI E P L D ++ E+ L + AR V A+ + HN
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELAR--SFFWQVLEAVRHCHN 128
Query: 466 GCELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
C +LH DIK +N+L+D + K+ DFG + A ++ T GT Y PE +
Sbjct: 129 -CG--VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD---TVYTDFDGTRVYSPPE-W 180
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKE 584
+R + V+S G+LL +M+ E G + + + E +
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQV--------FFRQRVSSECQ 232
Query: 585 DFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRV 619
+ WC+ + P DRP+ +
Sbjct: 233 HLIR---------------WCLALRPSDRPTFEEI 252
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 374 RLVAVKVLEKTSN----FSDNFINEVATIGRIH--HVNIIHLLGFCCDGSTRALIYEYMP 427
R+VA+K+ +T + F E T GR+ HV IH G DG + + +
Sbjct: 60 RIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEI-DG--QLYVDXRLI 116
Query: 428 NGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHNGCELRILHLDIKPQNVLLDPDF 487
NG DL + + L P R + I + A++ H D+KP+N+L+ D
Sbjct: 117 NGV--DLAAXLRRQGPLAPPRAVAIVRQIGSALDAA---HAAGATHRDVKPENILVSADD 171
Query: 488 TPKVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIFMRNLGNPSGKSDVYSYGMLLLE 546
+ DFG+A A + + + + GT+ Y APE F + + + ++D+Y+ +L E
Sbjct: 172 FAYLVDFGIASA-TTDEKLTQLGNTVGTLYYXAPERFSES--HATYRADIYALTCVLYE 227
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 46/275 (16%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEK--TSNFSD-----NFINEVATIGRIH--HVNI 406
LG+GG+G+VY G + D VA+K +EK S++ + EV + ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 407 IHLLGFCCDGSTRALIYEY-MPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
I LL + + LI E P L D ++ E+ L + AR V A+ + HN
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELAR--SFFWQVLEAVRHCHN 160
Query: 466 GCELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
C +LH DIK +N+L+D + K+ DFG + A ++ T GT Y PE +
Sbjct: 161 -CG--VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD---TVYTDFDGTRVYSPPE-W 212
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKE 584
+R + V+S G+LL +M+ E G + + + E +
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQV--------FFRQRVSSECQ 264
Query: 585 DFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRV 619
+ WC+ + P DRP+ +
Sbjct: 265 HLIR---------------WCLALRPSDRPTFEEI 284
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 46/275 (16%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEK--TSNFSD-----NFINEVATIGRIH--HVNI 406
LG+GG+G+VY G + D VA+K +EK S++ + EV + ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 407 IHLLGFCCDGSTRALIYEY-MPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
I LL + + LI E P L D ++ E+ L + AR V A+ + HN
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELAR--SFFWQVLEAVRHCHN 161
Query: 466 GCELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
C +LH DIK +N+L+D + K+ DFG + A ++ T GT Y PE +
Sbjct: 162 -CG--VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD---TVYTDFDGTRVYSPPE-W 213
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKE 584
+R + V+S G+LL +M+ E G + + + E +
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQV--------FFRQRVSSECQ 265
Query: 585 DFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRV 619
+ WC+ + P DRP+ +
Sbjct: 266 HLIR---------------WCLALRPSDRPTFEEI 285
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 46/275 (16%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEK--TSNFSD-----NFINEVATIGRIH--HVNI 406
LG+GG+G+VY G + D VA+K +EK S++ + EV + ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 407 IHLLGFCCDGSTRALIYEY-MPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
I LL + + LI E P L D ++ E+ L + AR V A+ + HN
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELAR--SFFWQVLEAVRHCHN 161
Query: 466 GCELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
C +LH DIK +N+L+D + K+ DFG + A ++ T GT Y PE +
Sbjct: 162 -CG--VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD---TVYTDFDGTRVYSPPE-W 213
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKE 584
+R + V+S G+LL +M+ E G + + + E +
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQV--------FFRQRVSSECQ 265
Query: 585 DFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRV 619
+ WC+ + P DRP+ +
Sbjct: 266 HLIR---------------WCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 46/275 (16%)
Query: 357 LGTGGYGNVYKG-KFPDGRLVAVKVLEK--TSNFSD-----NFINEVATIGRIH--HVNI 406
LG+GG+G+VY G + D VA+K +EK S++ + EV + ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 407 IHLLGFCCDGSTRALIYEY-MPNGSLGDLLSREKENLSLKPARLLEIALGVAHAIEYLHN 465
I LL + + LI E P L D ++ E+ L + AR V A+ + HN
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELAR--SFFWQVLEAVRHCHN 161
Query: 466 GCELRILHLDIKPQNVLLDPDFTP-KVSDFGLAKAHSRNRSVVTMTGPRGTIGYIAPEIF 524
C +LH DIK +N+L+D + K+ DFG + A ++ T GT Y PE +
Sbjct: 162 -CG--VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD---TVYTDFDGTRVYSPPE-W 213
Query: 525 MRNLGNPSGKSDVYSYGMLLLEMIEEKKHLRPTETTSGSNTTEAYFPDWIYDKLIQPEKE 584
+R + V+S G+LL +M+ E G + + + E +
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQV--------FFRQRVSXECQ 265
Query: 585 DFVEEEDDCIARKMIIVGLWCIQINPKDRPSMTRV 619
+ WC+ + P DRP+ +
Sbjct: 266 HLIR---------------WCLALRPSDRPTFEEI 285
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,081,149
Number of Sequences: 62578
Number of extensions: 798754
Number of successful extensions: 4180
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 282
Number of HSP's that attempted gapping in prelim test: 2014
Number of HSP's gapped (non-prelim): 1269
length of query: 670
length of database: 14,973,337
effective HSP length: 105
effective length of query: 565
effective length of database: 8,402,647
effective search space: 4747495555
effective search space used: 4747495555
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)