Your job contains 1 sequence.
>005912
MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE
DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY
CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN
QPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRGK
TPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVEE
RLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSRG
RPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESEL
SDVLDDDVTDVEYVAKDEEADEEEEVEQAEPESQDVDRVKEKLVEAKKPLQMIGVQLLKD
SDQTTTTSKRSMKRSSRMVEDDDDEDWFPEDPFEAFKEMRKRKVFDVSDMYTIADAWGWT
WEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKI
LQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDRVITSRQT
GETSVDDASS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005912
(670 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2015213 - symbol:AT1G63150 species:3702 "Arabi... 142 8.3e-07 2
TAIR|locus:1005716169 - symbol:AT5G21222 species:3702 "Ar... 123 4.3e-06 2
TAIR|locus:1009023134 - symbol:AT1G12775 species:3702 "Ar... 123 6.2e-05 2
TAIR|locus:2203916 - symbol:AT1G62590 species:3702 "Arabi... 127 9.0e-05 2
TAIR|locus:504956171 - symbol:ABO5 "ABA Overly-Sensitive ... 128 0.00012 1
TAIR|locus:2084978 - symbol:AT3G04760 species:3702 "Arabi... 127 0.00016 2
TAIR|locus:2151281 - symbol:AT5G02860 species:3702 "Arabi... 120 0.00030 2
TAIR|locus:2015494 - symbol:RPF3 "RNA processing factor 3... 116 0.00032 2
TAIR|locus:1006230454 - symbol:AT5G18475 "AT5G18475" spec... 118 0.00036 2
TAIR|locus:2166610 - symbol:AT5G38730 "AT5G38730" species... 112 0.00047 2
TAIR|locus:2039415 - symbol:AT2G16880 "AT2G16880" species... 117 0.00049 2
TAIR|locus:2038451 - symbol:AT1G63230 species:3702 "Arabi... 99 0.00080 2
TAIR|locus:2061310 - symbol:GUN1 "AT2G31400" species:3702... 122 0.00082 1
TAIR|locus:2054331 - symbol:EMB2654 "EMBRYO DEFECTIVE 265... 109 0.00085 2
>TAIR|locus:2015213 [details] [associations]
symbol:AT1G63150 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 TIGRFAMs:TIGR00756 EMBL:AC010795
EMBL:AY056252 EMBL:BT000997 IPI:IPI00539871 PIR:A96657
RefSeq:NP_564809.1 UniGene:At.26348 UniGene:At.75283
ProteinModelPortal:Q9CAM8 SMR:Q9CAM8 PaxDb:Q9CAM8 PRIDE:Q9CAM8
EnsemblPlants:AT1G63150.1 GeneID:842619 KEGG:ath:AT1G63150
GeneFarm:4783 TAIR:At1g63150 eggNOG:NOG320495 HOGENOM:HOG000015176
InParanoid:Q9CAM8 OMA:CELFREM PhylomeDB:Q9CAM8
ProtClustDB:CLSN2682329 Genevestigator:Q9CAM8 Pfam:PF12854
Pfam:PF13041 Uniprot:Q9CAM8
Length = 629
Score = 142 (55.0 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 52/179 (29%), Positives = 78/179 (43%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD AL + +MEAA A FN ++ EVA F ME ++P
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME--TKGIRP 291
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TYN +I +Y R D + LL M+E K++ PNV T+ L++ F K + E
Sbjct: 292 NVVTYNSLINCLC---NYGRWSDASRLLSNMLE--KKINPNVVTFNALIDAFFKEGKLVE 346
Query: 126 AIR-HFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM-AKDNQP 182
A + H +Q + +N L + C R+ E + + M +KD P
Sbjct: 347 AEKLHEEMIQRSIDPDTITYN---------LLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Score = 52 (23.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 562 AIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIIS 621
A + K+ E G P G +IRA +R +A +++++ S G+V G +++
Sbjct: 554 ADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFV-GDASTISLVT 612
Query: 622 LCLDLGELD 630
L G LD
Sbjct: 613 NMLHDGRLD 621
>TAIR|locus:1005716169 [details] [associations]
symbol:AT5G21222 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA;ISS] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR011990 Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 InterPro:IPR002885 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC140977
HSSP:P49137 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AB050965
EMBL:AB052663 IPI:IPI00538310 RefSeq:NP_850859.2 UniGene:At.22168
ProteinModelPortal:Q8S9D1 SMR:Q8S9D1 STRING:Q8S9D1 PaxDb:Q8S9D1
PRIDE:Q8S9D1 EnsemblPlants:AT5G21222.1 GeneID:832244
KEGG:ath:AT5G21222 TAIR:At5g21222 HOGENOM:HOG000115643
InParanoid:Q8S9D1 OMA:NSNDANT PhylomeDB:Q8S9D1
ProtClustDB:CLSN2915154 Genevestigator:Q8S9D1 Uniprot:Q8S9D1
Length = 831
Score = 123 (48.4 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 36/126 (28%), Positives = 63/126 (50%)
Query: 11 HSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETY 70
HS L + ++E G T FN +++ + G + A FE M+ E KP T+
Sbjct: 371 HS-LLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK--ESGCKPTASTF 427
Query: 71 NCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
N +I+ Y + ++++ + LL MM+ D + LQPN +T +LV+ + + EA
Sbjct: 428 NTLIKGYGKI---GKLEESSRLLDMMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIV 483
Query: 131 RALQNY 136
+Q+Y
Sbjct: 484 YKMQSY 489
Score = 68 (29.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 21/87 (24%), Positives = 38/87 (43%)
Query: 553 WSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFG 612
WS +++ +I ++E G P I +++ + RA P +IL + G
Sbjct: 611 WSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Query: 613 SPLYDEIISLCLDLGELDAAVAIVADM 639
+Y +IIS GE+ A+ + M
Sbjct: 671 VVIYTQIISGWCSAGEMKKAMQVYKKM 697
>TAIR|locus:1009023134 [details] [associations]
symbol:AT1G12775 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC012187
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 UniGene:At.20506
UniGene:At.27284 HOGENOM:HOG000015176 Pfam:PF12854 Pfam:PF13041
ProtClustDB:CLSN2682250 IPI:IPI00657065 PIR:A86261
RefSeq:NP_001031033.1 ProteinModelPortal:Q9LPX2 SMR:Q9LPX2
EnsemblPlants:AT1G12775.1 GeneID:3766712 KEGG:ath:AT1G12775
GeneFarm:4837 TAIR:At1g12775 eggNOG:NOG267185 OMA:YNIMISE
PhylomeDB:Q9LPX2 Genevestigator:Q9LPX2 Uniprot:Q9LPX2
Length = 644
Score = 123 (48.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 44/171 (25%), Positives = 81/171 (47%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G + A+E+ +ME ++ ++ G + AF F ME K
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG--FKA 296
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I + A +D D A+LL M++ +++ PNV T+++L++ F K + E
Sbjct: 297 DIITYNTLIGGFCNAGRWD---DGAKLLRDMIK--RKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
A + + + G + N + SL + C+E R+ E ++ ++ M
Sbjct: 352 ADQLLKEMMQ-RG---IAPNTITYN---SL-IDGFCKENRLEEAIQMVDLM 394
Score = 54 (24.1 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 20/94 (21%), Positives = 43/94 (45%)
Query: 555 QEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSP 614
+E +E AIQ++ +I G P I ++I +A L++ ++ G + +
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 615 LYDEIISLCLDLGELDAAVAIVADMETTGIAVPD 648
Y+ ++ G+L+ A + +M + + PD
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR-PD 472
Score = 47 (21.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 626 LGELDAAVA--IVADMETTGIAVPDQTLDRVITSRQTGE 662
LG+ DA A ++ +M+++G T+ VI +GE
Sbjct: 589 LGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
>TAIR|locus:2203916 [details] [associations]
symbol:AT1G62590 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF13812 TIGRFAMs:TIGR00756
EMBL:AC005698 eggNOG:NOG320495 HOGENOM:HOG000015176
ProtClustDB:CLSN2682329 Pfam:PF12854 Pfam:PF13041 EMBL:AY136399
EMBL:AK221654 IPI:IPI00532416 PIR:F96651 RefSeq:NP_176447.1
UniGene:At.36146 ProteinModelPortal:Q9SXD8 SMR:Q9SXD8
EnsemblPlants:AT1G62590.1 GeneID:842556 KEGG:ath:AT1G62590
GeneFarm:4354 TAIR:At1g62590 InParanoid:Q9SXD8 OMA:QHITAST
PhylomeDB:Q9SXD8 Genevestigator:Q9SXD8 Uniprot:Q9SXD8
Length = 634
Score = 127 (49.8 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 38/121 (31%), Positives = 58/121 (47%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD AL + +MEAA A FN ++ + A F+ ME ++P
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME--TKGIRP 293
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY+ +I SY R D ++LL M+E K++ PN+ T+ L++ F K E
Sbjct: 294 NVVTYSSLISCLC---SYGRWSDASQLLSDMIE--KKINPNLVTFNALIDAFVKEGKFVE 348
Query: 126 A 126
A
Sbjct: 349 A 349
Score = 48 (22.0 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 562 AIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIIS 621
A ++ K+ E G P G +IRA +R +A +++++ S +V + + +
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Query: 622 LCLDLGELD 630
+ D G LD
Sbjct: 619 MLHD-GRLD 626
>TAIR|locus:504956171 [details] [associations]
symbol:ABO5 "ABA Overly-Sensitive 5" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008380 "RNA splicing" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009737 GO:GO:0008380
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AC006216 IPI:IPI00542719 PIR:B96559 RefSeq:NP_683419.1
UniGene:At.52149 ProteinModelPortal:Q9ZU27 SMR:Q9ZU27 PaxDb:Q9ZU27
PRIDE:Q9ZU27 EnsemblPlants:AT1G51965.1 GeneID:841625
KEGG:ath:AT1G51965 GeneFarm:4328 TAIR:At1g51965 eggNOG:NOG244457
HOGENOM:HOG000083094 InParanoid:Q9ZU27 OMA:DIFAYNM PhylomeDB:Q9ZU27
ProtClustDB:CLSN2690458 Genevestigator:Q9ZU27 Uniprot:Q9ZU27
Length = 650
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA + G+ A+ I E+E + +N L++C G + A F+ M+ E
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ--E 540
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ +++ + + E + + E M+V K QPN+ TY +L++C K
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFE--EMLV---KGCQPNIVTYNILLDCLEKN 595
Query: 121 CAVTEAI 127
EA+
Sbjct: 596 GRTAEAV 602
>TAIR|locus:2084978 [details] [associations]
symbol:AT3G04760 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC011437 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 EMBL:AY056218 EMBL:AY133775 EMBL:AK221573
IPI:IPI00532561 RefSeq:NP_566237.1 UniGene:At.18557
ProteinModelPortal:Q9SR00 SMR:Q9SR00 STRING:Q9SR00 PaxDb:Q9SR00
PRIDE:Q9SR00 EnsemblPlants:AT3G04760.1 GeneID:819636
KEGG:ath:AT3G04760 TAIR:At3g04760 eggNOG:NOG279361
HOGENOM:HOG000238342 InParanoid:Q9SR00 OMA:NTMFSAL PhylomeDB:Q9SR00
ProtClustDB:CLSN2688070 Genevestigator:Q9SR00 Uniprot:Q9SR00
Length = 602
Score = 127 (49.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 44/171 (25%), Positives = 80/171 (46%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G AL++ EM + G F +N ++ G+ + AF N+E +PD
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG--CEPDVI 299
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+YN +++A ++ + +L+ M + + PNV TY++L+ + + EA+
Sbjct: 300 SYNILLRALLNQGKWEEGE---KLMTKMFSE--KCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 129 HFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ ++ +G T ++ DPL + A CREGR+ +E LE M D
Sbjct: 355 LLKLMKE-KGLTPDAYSY----DPL---IAAFCREGRLDVAIEFLETMISD 397
Score = 45 (20.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 20/85 (23%), Positives = 39/85 (45%)
Query: 558 EVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYD 617
+ + A++I K+ E+G +P + A + L ++ + S G Y+
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 618 EIIS-LCLDLGELDAAVAIVADMET 641
+IS LC + G +D A ++ DM +
Sbjct: 478 SMISCLCRE-GMVDEAFELLVDMRS 501
>TAIR|locus:2151281 [details] [associations]
symbol:AT5G02860 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL162973 Pfam:PF01535
TIGRFAMs:TIGR00756 eggNOG:NOG320495 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000241317 ProtClustDB:CLSN2683067 IPI:IPI00538555
PIR:T48307 RefSeq:NP_195906.1 UniGene:At.54692
ProteinModelPortal:Q9LYZ9 SMR:Q9LYZ9 PaxDb:Q9LYZ9 PRIDE:Q9LYZ9
EnsemblPlants:AT5G02860.1 GeneID:831761 KEGG:ath:AT5G02860
TAIR:At5g02860 InParanoid:Q9LYZ9 OMA:NTLISCC PhylomeDB:Q9LYZ9
Genevestigator:Q9LYZ9 Uniprot:Q9LYZ9
Length = 819
Score = 120 (47.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 40/131 (30%), Positives = 54/131 (41%)
Query: 6 CKAGD-HSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK 64
CK G H A ++ EM+AAG +N LL P+ A M
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG--FS 346
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P TYN +I AY R D + EL M E K +P+V TY L+ F + V
Sbjct: 347 PSIVTYNSLISAYARDGMLD---EAMELKNQMAE--KGTKPDVFTYTTLLSGFERAGKVE 401
Query: 125 EAIRHFRALQN 135
A+ F ++N
Sbjct: 402 SAMSIFEEMRN 412
Score = 53 (23.7 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 17/76 (22%), Positives = 34/76 (44%)
Query: 526 DVSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVII 585
+VS ++ G+ ERE N +S+ E A+ + ++++ G TP + ++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 586 RAAIRAPLPSAFLKIL 601
A R + K+L
Sbjct: 532 AALARGGMWEQSEKVL 547
>TAIR|locus:2015494 [details] [associations]
symbol:RPF3 "RNA processing factor 3" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006397 "mRNA processing" evidence=IMP]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507 EMBL:AC011000
GO:GO:0006397 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF13812
TIGRFAMs:TIGR00756 eggNOG:NOG320495 HOGENOM:HOG000015176
ProtClustDB:CLSN2682329 Pfam:PF12854 Pfam:PF13041 EMBL:AY056104
IPI:IPI00518937 PIR:H96653 RefSeq:NP_176481.2 UniGene:At.70258
ProteinModelPortal:Q9LQ14 SMR:Q9LQ14 EnsemblPlants:AT1G62930.1
GeneID:842594 KEGG:ath:AT1G62930 GeneFarm:4779 TAIR:At1g62930
InParanoid:Q9LQ14 OMA:YSMLINC PhylomeDB:Q9LQ14
Genevestigator:Q9LQ14 Uniprot:Q9LQ14
Length = 629
Score = 116 (45.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD AL + +ME A + ++ A C V A E ++P
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIID--ALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TYN +I+ +Y R D + LL M+E +++ PNV T++ L++ F K + E
Sbjct: 289 NVVTYNSLIRCLC---NYGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVE 343
Query: 126 A 126
A
Sbjct: 344 A 344
Score = 54 (24.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 560 ELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEI 619
E A + ++ E G P G +IRA +R +A +++++ S G+V + +
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Query: 620 ISLCLDLGELD 630
I++ D G L+
Sbjct: 612 INMLHD-GRLE 621
>TAIR|locus:1006230454 [details] [associations]
symbol:AT5G18475 "AT5G18475" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC069328 Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 EMBL:AK228588 IPI:IPI00522613 RefSeq:NP_974803.1
UniGene:At.19705 UniGene:At.63152 ProteinModelPortal:Q3E9F0
SMR:Q3E9F0 PRIDE:Q3E9F0 EnsemblPlants:AT5G18475.1 GeneID:2745987
KEGG:ath:AT5G18475 TAIR:At5g18475 eggNOG:NOG314917
HOGENOM:HOG000239063 InParanoid:Q3E9F0 OMA:ATLINGH PhylomeDB:Q3E9F0
ProtClustDB:CLSN2681338 Genevestigator:Q3E9F0 Uniprot:Q3E9F0
Length = 506
Score = 118 (46.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 44/177 (24%), Positives = 79/177 (44%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAG-RMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
++ CK GD + A + EM+ +G + ++ L+ C + A FE+M
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM-IS 260
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
++ + PD T+N +I + RA +R + ++L M ++ PNV Y+ L+ F K
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAK---KILDFMKKNG--CNPNVYNYSALMNGFCK 315
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ EA + F ++ + G K L G + + CR G E ++ L M
Sbjct: 316 VGKIQEAKQTFDEVK--KTGLK-LDTVG-----YTTLMNCFCRNGETDEAMKLLGEM 364
Score = 49 (22.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 583 VIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIIS-LCLDLGELDAAVAIVADMET 641
VI+R L++L + S G Y I++ LC + GEL+ AV ++ M
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN-GELEKAVKFLSVMSE 436
Query: 642 TGIAVPDQTLDRVITSR-QTGETSV 665
GI T + ++ ++G T +
Sbjct: 437 RGIWPHHATWNELVVRLCESGYTEI 461
>TAIR|locus:2166610 [details] [associations]
symbol:AT5G38730 "AT5G38730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB011478 Pfam:PF12854
Pfam:PF13041 IPI:IPI00536250 RefSeq:NP_198689.1 UniGene:At.55226
ProteinModelPortal:Q9FKR3 SMR:Q9FKR3 PRIDE:Q9FKR3
EnsemblPlants:AT5G38730.1 GeneID:833864 KEGG:ath:AT5G38730
TAIR:At5g38730 eggNOG:NOG288648 HOGENOM:HOG000093046
InParanoid:Q9FKR3 OMA:INAYCKR PhylomeDB:Q9FKR3
ProtClustDB:CLSN2687128 Genevestigator:Q9FKR3 Uniprot:Q9FKR3
Length = 596
Score = 112 (44.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 54/223 (24%), Positives = 99/223 (44%)
Query: 1 MIAEDC-KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
++ C K+GD A ++ EME G F +N L+S + A + + ME
Sbjct: 208 VLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME-- 265
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ P+ TYN I ++R R+++ L + +D + N TY L++ + +
Sbjct: 266 RSGVAPNIVTYNSFIHGFSRE---GRMREATRLFREIKDD---VTANHVTYTTLIDGYCR 319
Query: 120 YCAVTEAIRHFRALQN--YEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+ EA+R +++ + G V +N LR LC +GRI E L M+
Sbjct: 320 MNDIDEALRLREVMESRGFSPGV-VTYNS---------ILRKLCEDGRIREANRLLTEMS 369
Query: 178 -KDNQP--VPPRAMILSR-KYRTLVSSWIEPLQEEAELGYEID 216
K +P + +I + K +VS+ ++ ++ E G ++D
Sbjct: 370 GKKIEPDNITCNTLINAYCKIEDMVSA-VKVKKKMIESGLKLD 411
Score = 56 (24.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 21/94 (22%), Positives = 38/94 (40%)
Query: 558 EVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYD 617
E+E A + + +IE G +P + ++ K+L++ G LY
Sbjct: 427 ELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYR 486
Query: 618 EIISLCLDLGELDAAVAIVADMETTGIAVPDQTL 651
+I L ++D A + ME G+ V D +
Sbjct: 487 GLIRRICKLEQVDYAKVLFESMEKKGL-VGDSVI 519
>TAIR|locus:2039415 [details] [associations]
symbol:AT2G16880 "AT2G16880" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC005167 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
EMBL:AY072079 EMBL:AY096663 IPI:IPI00543040 PIR:D84545
RefSeq:NP_179280.1 UniGene:At.40223 ProteinModelPortal:Q9ZVX5
SMR:Q9ZVX5 IntAct:Q9ZVX5 PaxDb:Q9ZVX5 PRIDE:Q9ZVX5
EnsemblPlants:AT2G16880.1 GeneID:816189 KEGG:ath:AT2G16880
TAIR:At2g16880 eggNOG:NOG304367 HOGENOM:HOG000239828
InParanoid:Q9ZVX5 OMA:DVVTCNT PhylomeDB:Q9ZVX5
ProtClustDB:CLSN2683765 Genevestigator:Q9ZVX5 Uniprot:Q9ZVX5
Length = 743
Score = 117 (46.2 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 65/237 (27%), Positives = 104/237 (43%)
Query: 12 SNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYN 71
S+A E+ +M G FN L++ G E A E M E + PD TYN
Sbjct: 186 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERM-VSEFKVNPDNVTYN 244
Query: 72 CVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFR 131
+++A ++ R+ D+ ELL M ++ L PN TY LV + K ++ EA +
Sbjct: 245 TILKAMSKK---GRLSDLKELLLDMKKNG--LVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299
Query: 132 ALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN-QP-VPPRAMI 189
++ T VL + + ++ + LC G + E LE ++AM QP V +
Sbjct: 300 LMKQ----TNVLPDLCTY----NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351
Query: 190 LSRKYRTLVSSWIEPLQEEAEL-GYEIDYIARYISEGGLTGERKRW-VPRRGKTPLD 244
+ + +S L E+ E G + + + IS L E KR V R+ K +D
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD 408
Score = 53 (23.7 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 616 YDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDRVITSRQTGETSVDDA 668
Y +I L +G+L A+ ++ +M GI + TL+ ++ + E +D+A
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL-CKERKLDEA 470
>TAIR|locus:2038451 [details] [associations]
symbol:AT1G63230 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
UniGene:At.24672 EMBL:BT028924 IPI:IPI00536908 RefSeq:NP_176512.2
UniGene:At.49484 ProteinModelPortal:Q0IGJ6 SMR:Q0IGJ6 PRIDE:Q0IGJ6
EnsemblPlants:AT1G63230.1 GeneID:842628 KEGG:ath:AT1G63230
TAIR:At1g63230 eggNOG:NOG284567 InParanoid:Q0IGJ6 OMA:FTEMHDK
PhylomeDB:Q0IGJ6 ProtClustDB:CLSN2682583 Genevestigator:Q0IGJ6
Uniprot:Q0IGJ6
Length = 323
Score = 99 (39.9 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD +AL + +ME A +N ++ G A F M + + P
Sbjct: 52 CKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH--DKGIFP 109
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TY+ +I ++ R+ R D +LL M+E +++ P+V T++ L+ K V+E
Sbjct: 110 DVITYSGMIDSFCRS---GRWTDAEQLLRDMIE--RQINPDVVTFSALINALVKEGKVSE 164
Query: 126 A 126
A
Sbjct: 165 A 165
Score = 60 (26.2 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 19/83 (22%), Positives = 38/83 (45%)
Query: 575 TPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVA 634
+P + + +I +A ++I + H G V + Y +I +G+LDAA
Sbjct: 213 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQD 272
Query: 635 IVADMETTGIAVPDQTLDRVITS 657
++ M ++G+A T ++ S
Sbjct: 273 LLNVMISSGVAPNYITFQSMLAS 295
>TAIR|locus:2061310 [details] [associations]
symbol:GUN1 "AT2G31400" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0031930 "mitochondria-nucleus
signaling pathway" evidence=IMP] [GO:0010019 "chloroplast-nucleus
signaling pathway" evidence=IMP] InterPro:IPR011990
InterPro:IPR002885 INTERPRO:IPR002625 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0031930
Gene3D:1.25.40.10 EMBL:AC007169 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 SMART:SM00463 PROSITE:PS50828
GO:GO:0010019 Pfam:PF13041 EMBL:BX819946 IPI:IPI00538422 PIR:C84720
RefSeq:NP_180698.1 UniGene:At.20815 ProteinModelPortal:Q9SIC9
SMR:Q9SIC9 EnsemblPlants:AT2G31400.1 GeneID:817698
KEGG:ath:AT2G31400 GeneFarm:4937 TAIR:At2g31400 eggNOG:NOG313285
HOGENOM:HOG000030408 InParanoid:Q9SIC9 OMA:FEDASML PhylomeDB:Q9SIC9
ProtClustDB:CLSN2683142 Genevestigator:Q9SIC9 Uniprot:Q9SIC9
Length = 918
Score = 122 (48.0 bits), Expect = 0.00082, P = 0.00082
Identities = 48/176 (27%), Positives = 75/176 (42%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG AL + EM G +N LLS G E A M +K D
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM--ASVGIKKD 478
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN ++ Y + YD V+ V M +H + PN+ TY+ L++ ++K EA
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKV---FTEMKREH--VLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 127 IRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ FR ++ G + VL+ S + ALC+ G + + ++ M K+
Sbjct: 534 MEIFREFKS--AGLRADVVLY---------SALIDALCKNGLVGSAVSLIDEMTKE 578
>TAIR|locus:2054331 [details] [associations]
symbol:EMB2654 "EMBRYO DEFECTIVE 2654" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC002339 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
EMBL:AY091135 EMBL:AY117242 IPI:IPI00545487 PIR:C84845
RefSeq:NP_850356.1 UniGene:At.43624 ProteinModelPortal:Q8RWS8
SMR:Q8RWS8 IntAct:Q8RWS8 PRIDE:Q8RWS8 EnsemblPlants:AT2G41720.1
GeneID:818771 KEGG:ath:AT2G41720 GeneFarm:4994 TAIR:At2g41720
eggNOG:NOG239597 HOGENOM:HOG000030732 InParanoid:Q8RWS8 OMA:MMKLFYK
PhylomeDB:Q8RWS8 ProtClustDB:CLSN2680191 Genevestigator:Q8RWS8
Uniprot:Q8RWS8
Length = 822
Score = 109 (43.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 29/126 (23%), Positives = 60/126 (47%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G+ N + M A G +N L+ A G+ A + +++ ++ + PD
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK--QNGIIPDVV 391
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+Y C++ +Y R+ + ++V +M+ +R +PNV TY L++ + + EA+
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVF----LMMRKERR-KPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 129 HFRALQ 134
FR ++
Sbjct: 447 IFRQME 452
Score = 60 (26.2 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 20/87 (22%), Positives = 38/87 (43%)
Query: 554 SQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGS 613
S++W A ++ L++ G P C+ ++RA + PS ++ F
Sbjct: 613 SEKWGK--ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTG 670
Query: 614 PLYDEIISLCLDLGELDAAVAIVADME 640
++ EI S C L E A+ ++ M+
Sbjct: 671 AVFFEIFSACNTLQEWKRAIDLIQMMD 697
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 670 586 0.00083 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 629 (67 KB)
Total size of DFA: 339 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.03u 0.07s 47.10t Elapsed: 00:00:03
Total cpu time: 47.03u 0.07s 47.10t Elapsed: 00:00:03
Start: Mon May 20 19:39:00 2013 End: Mon May 20 19:39:03 2013