BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005912
(670 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255562037|ref|XP_002522027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538831|gb|EEF40431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 889
Score = 1106 bits (2861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/685 (81%), Positives = 610/685 (89%), Gaps = 24/685 (3%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG- 59
MI EDCK GDHSNALEIAYEMEAAGRMATTFHFN LLS QATCGIPE+AFATFENMEYG
Sbjct: 211 MIEEDCKVGDHSNALEIAYEMEAAGRMATTFHFNCLLSVQATCGIPEIAFATFENMEYGG 270
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E+YMKPDTETYN VIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNV+TYALLVECFTK
Sbjct: 271 EEYMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVRTYALLVECFTK 330
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
YC V EAIRHFRALQN+EGGTKVLH +GNFGDPLSLYLRALCREGRI+ELLEALEAM +D
Sbjct: 331 YCVVREAIRHFRALQNFEGGTKVLHYDGNFGDPLSLYLRALCREGRIVELLEALEAMGRD 390
Query: 180 NQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRG 239
NQP+PPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDY+ARY++EGGLTGERKRWVPRRG
Sbjct: 391 NQPIPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYVARYVAEGGLTGERKRWVPRRG 450
Query: 240 KTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVE 299
KTPLDPDA GFIYSNPMETSFKQRC+ED K +HRKLLRTL NEG A LG+ SESDY+RV
Sbjct: 451 KTPLDPDAAGFIYSNPMETSFKQRCIEDWKVHHRKLLRTLLNEGLAALGEASESDYLRVV 510
Query: 300 ERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
ERLKK+IKGP+Q+VLKPKAASKMVVSELKEEL+AQGLP DGTRNVLYQRVQKARRINRSR
Sbjct: 511 ERLKKIIKGPDQNVLKPKAASKMVVSELKEELEAQGLPIDGTRNVLYQRVQKARRINRSR 570
Query: 360 GRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESE 419
GRPLWVPPVEEEEEEVDEE+DE+ISRIKLEEGNTEFWKRRFLGEGLNG + + + + +SE
Sbjct: 571 GRPLWVPPVEEEEEEVDEELDEIISRIKLEEGNTEFWKRRFLGEGLNGSNLQPMSVAKSE 630
Query: 420 LSDVLDDDVTDVEYVAKDEEADE-------------EEEVEQAEPESQDVDR-VKEKLVE 465
L DVLDD V E+AD+ E EVE + E+QDVDR VKEK VE
Sbjct: 631 LPDVLDD-------VDAIEDADKEVEDEEADDEEEAEAEVEVEQTENQDVDRVVKEKEVE 683
Query: 466 AKKPLQMIGVQLLKDSDQTTTTSKRSMKRSSRM-VEDDDDEDWFPEDPFEAFKEMRKRKV 524
AKKPLQMIGVQLLKDSD TT SK+S +RS+R VEDD D+DWFPEDPFEAFKE+R+RKV
Sbjct: 684 AKKPLQMIGVQLLKDSDHLTTRSKKSKRRSARASVEDDADDDWFPEDPFEAFKELRERKV 743
Query: 525 FDVSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVI 584
FDV DMYTIAD WGWTWEREI NRPPQKWSQEWEVELAI++MLK +L GTPTIGDCA+I
Sbjct: 744 FDVEDMYTIADVWGWTWEREIKNRPPQKWSQEWEVELAIKLMLKA-QLSGTPTIGDCAMI 802
Query: 585 IRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGI 644
+RAAIRAP+PSAFLKILQ THSLGY FGSPLYDE+ISLCLD+GELDAA+AIVAD+E+TGI
Sbjct: 803 LRAAIRAPMPSAFLKILQTTHSLGYTFGSPLYDEVISLCLDIGELDAAIAIVADLESTGI 862
Query: 645 AVPDQTLDRVITSRQTGETSVDDAS 669
VPDQTLDRVI++RQ + VD+ S
Sbjct: 863 TVPDQTLDRVISARQAADNPVDETS 887
>gi|359476532|ref|XP_002268094.2| PREDICTED: uncharacterized protein LOC100241547 [Vitis vinifera]
gi|296085161|emb|CBI28656.3| unnamed protein product [Vitis vinifera]
Length = 884
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/672 (81%), Positives = 608/672 (90%), Gaps = 2/672 (0%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I EDCK GDHSNAL IAYEMEAAGRMATT+HFN LLS QATCGIPE+AFATFENMEYGE
Sbjct: 210 LIEEDCKVGDHSNALTIAYEMEAAGRMATTYHFNCLLSVQATCGIPEIAFATFENMEYGE 269
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
DYMKPDTETYN VIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVEC TKY
Sbjct: 270 DYMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECLTKY 329
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
C V EAIRHFRAL+N+EGGTKVLH+EGNFGDPLSLYLRALCREGRI+ELL+ALEAMAKDN
Sbjct: 330 CVVREAIRHFRALKNFEGGTKVLHDEGNFGDPLSLYLRALCREGRIVELLDALEAMAKDN 389
Query: 181 QPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRGK 240
QP+PPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYI+EGGLTG+RKRWVPRRGK
Sbjct: 390 QPIPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYIAEGGLTGDRKRWVPRRGK 449
Query: 241 TPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVEE 300
TPLDPDA+GFIYSNPMETSFKQRCLED K YHRKLL+TL+NEG A LG+VSESDY+RVEE
Sbjct: 450 TPLDPDALGFIYSNPMETSFKQRCLEDWKMYHRKLLKTLRNEGLAALGEVSESDYIRVEE 509
Query: 301 RLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSRG 360
RL+K+IKGP+Q+ LKPKAASKM+VSELKEEL+AQGLPTDGTRNVLYQRVQKARRINRSRG
Sbjct: 510 RLRKIIKGPDQNALKPKAASKMIVSELKEELEAQGLPTDGTRNVLYQRVQKARRINRSRG 569
Query: 361 RPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESEL 420
RPLWVPPVEEEEEEVDEE+DELISRIKL+EGNTEFWKRRFLGE L K ++ + SEL
Sbjct: 570 RPLWVPPVEEEEEEVDEELDELISRIKLQEGNTEFWKRRFLGEDLTVGRGKPMDKENSEL 629
Query: 421 SDVLDD-DVTDVEYVAKDEEADEEEEVEQAEPESQDVDRVKEKLVEAKKPLQMIGVQLLK 479
DVLDD D+ + +++ +EEE E ESQ DRVK+K VEA KPLQMIGVQLLK
Sbjct: 630 PDVLDDADIGEDTAKEVEDDEADEEEEEVEPTESQVADRVKDKEVEAAKPLQMIGVQLLK 689
Query: 480 DSDQTTTTSKRSMKRSSRM-VEDDDDEDWFPEDPFEAFKEMRKRKVFDVSDMYTIADAWG 538
DSDQTT +++S ++ SR +ED DD+DWFP D EAFKEMR+RK+FDVSDMYTIAD WG
Sbjct: 690 DSDQTTPATRKSRRKLSRASMEDSDDDDWFPLDIHEAFKEMRERKIFDVSDMYTIADVWG 749
Query: 539 WTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFL 598
WTWE+E+ N+PP+ W+QEWEVELAI++MLKVIELGGTPTIGDCA+I+RAAIRAPLPSAFL
Sbjct: 750 WTWEKELKNKPPRSWTQEWEVELAIKVMLKVIELGGTPTIGDCAMILRAAIRAPLPSAFL 809
Query: 599 KILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDRVITSR 658
K+LQ TH LGYVFGSPLY+E+I LCLDLGELDAA+AIVADMET+GIAVPD+TLDRVI++R
Sbjct: 810 KVLQTTHKLGYVFGSPLYNEVIILCLDLGELDAAIAIVADMETSGIAVPDETLDRVISAR 869
Query: 659 QTGETSVDDASS 670
Q +T+ D +S
Sbjct: 870 QMIDTAATDDTS 881
>gi|334185070|ref|NP_187076.2| plastid transcriptionally active 3 [Arabidopsis thaliana]
gi|332640537|gb|AEE74058.1| plastid transcriptionally active 3 [Arabidopsis thaliana]
Length = 910
Score = 1040 bits (2688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/683 (77%), Positives = 588/683 (86%), Gaps = 24/683 (3%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI EDCKAGDHSNAL+I+YEMEAAGRMATTFHFN LLS QATCGIPEVA+ATFENMEYGE
Sbjct: 218 MIEEDCKAGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAYATFENMEYGE 277
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+MKPDTETYN VIQAYTRAESYDRVQDVAELLGMMVEDHKR+QPNVKTYALLVECFTKY
Sbjct: 278 VFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDHKRVQPNVKTYALLVECFTKY 337
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
C V EAIRHFRAL+N+EGGT +LHN GNF DPLSLYLRALCREGRI+EL++AL+AM KDN
Sbjct: 338 CVVKEAIRHFRALKNFEGGTVILHNAGNFEDPLSLYLRALCREGRIVELIDALDAMRKDN 397
Query: 181 QPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRGK 240
QP+PPRAMI+SRKYRTLVSSWIEPLQEEAELGYEIDY+ARYI EGGLTGERKRWVPRRGK
Sbjct: 398 QPIPPRAMIMSRKYRTLVSSWIEPLQEEAELGYEIDYLARYIEEGGLTGERKRWVPRRGK 457
Query: 241 TPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVEE 300
TPLDPDA GFIYSNP+ETSFKQRCLED K +HRKLLRTLQ+EG VLGD SESDY+RV E
Sbjct: 458 TPLDPDASGFIYSNPIETSFKQRCLEDWKVHHRKLLRTLQSEGLPVLGDASESDYMRVVE 517
Query: 301 RLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSRG 360
RL+ +IKGP ++LKPKAASKMVVSELKEEL+AQGLP DGTRNVLYQRVQKARRIN+SRG
Sbjct: 518 RLRNIIKGPALNLLKPKAASKMVVSELKEELEAQGLPIDGTRNVLYQRVQKARRINKSRG 577
Query: 361 RPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESEL 420
RPLWVPP+EEEEEEVDEEVD+LI RIKL EG+TEFWKRRFLGEGL + +VE E+
Sbjct: 578 RPLWVPPIEEEEEEVDEEVDDLICRIKLHEGDTEFWKRRFLGEGL---IETSVESKETTE 634
Query: 421 SDVLDDDVTDVEYVAK-------------------DEEADEEEEVEQAEPESQDVDRVKE 461
S V + +E ++K DE +EE V + E ++ D VK
Sbjct: 635 SVVTGESEKAIEDISKEADNEEDDDEEEQEGDEDDDENEEEEVVVPETENRAEGEDLVKN 694
Query: 462 KLVEAKKPLQMIGVQLLKDSDQTTTTSKRSMKRSSRM-VEDDDDEDWFPEDPFEAFKEMR 520
K +AKK LQMIGVQLLK+SD+ T KR KR+SRM +EDD DEDWFPE+PFEAFKEMR
Sbjct: 695 KAADAKKHLQMIGVQLLKESDEANRTKKRG-KRASRMTLEDDADEDWFPEEPFEAFKEMR 753
Query: 521 KRKVFDVSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGD 580
+RKVFDV+DMYTIAD WGWTWE++ N+ P+KWSQEWEVELAI +M KVIELGG PTIGD
Sbjct: 754 ERKVFDVADMYTIADVWGWTWEKDFKNKTPRKWSQEWEVELAIVLMTKVIELGGIPTIGD 813
Query: 581 CAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADME 640
CAVI+RAA+RAP+PSAFLKILQ THSLGY FGSPLYDEII+LCLDLGELDAA+AIVADME
Sbjct: 814 CAVILRAALRAPMPSAFLKILQTTHSLGYSFGSPLYDEIITLCLDLGELDAAIAIVADME 873
Query: 641 TTGIAVPDQTLDRVITSRQTGET 663
TTGI VPDQTLD+VI++RQ+ E+
Sbjct: 874 TTGITVPDQTLDKVISARQSNES 896
>gi|297833108|ref|XP_002884436.1| hypothetical protein ARALYDRAFT_477686 [Arabidopsis lyrata subsp.
lyrata]
gi|297330276|gb|EFH60695.1| hypothetical protein ARALYDRAFT_477686 [Arabidopsis lyrata subsp.
lyrata]
Length = 914
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/687 (76%), Positives = 587/687 (85%), Gaps = 28/687 (4%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI EDCKAGDHSNALEI+YEMEAAGRMATTFHFN LLS QATCGIPEVA+ATFENMEYGE
Sbjct: 218 MIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAYATFENMEYGE 277
Query: 61 D-YMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+MKPDTETYN VIQAYTRAESYDRVQDVAELLGMMVEDHKR+QPNVKTYALLVECFTK
Sbjct: 278 GLFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDHKRVQPNVKTYALLVECFTK 337
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
YC V EAIRHFRAL+N+EGGT +LHN G F DPLSLYLRALCREGRI+EL++AL+AM KD
Sbjct: 338 YCVVKEAIRHFRALKNFEGGTTILHNAGKFEDPLSLYLRALCREGRIVELIDALDAMRKD 397
Query: 180 NQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRG 239
+QP+PPRAMI+SRKYRTLVSSWIEPLQEEAELGYEIDY+ARYI EGGLTGERKRWVPRRG
Sbjct: 398 SQPIPPRAMIMSRKYRTLVSSWIEPLQEEAELGYEIDYVARYIEEGGLTGERKRWVPRRG 457
Query: 240 KTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVE 299
KTPLDPDA GFIYSNP+ETSFKQRCLED K +HRKLLRTLQ+EG VLGD SESDY+RV
Sbjct: 458 KTPLDPDASGFIYSNPIETSFKQRCLEDWKIHHRKLLRTLQSEGLPVLGDASESDYMRVM 517
Query: 300 ERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
ERL+ +IKGP Q++LKPKAASKMVVSELKEEL+AQGLP DGTRNVLYQRVQKARRIN+SR
Sbjct: 518 ERLRNIIKGPAQNLLKPKAASKMVVSELKEELEAQGLPIDGTRNVLYQRVQKARRINKSR 577
Query: 360 GRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESE 419
GRPLWVPP+EEEEEEVDEEVD+LI RIKL EG+TEFWKRRFLGEGL + +VE E+
Sbjct: 578 GRPLWVPPIEEEEEEVDEEVDDLICRIKLHEGDTEFWKRRFLGEGLI---ETSVESKETT 634
Query: 420 LSDVLDDDVTDVEYVAK--------------------DEEADEEEEVEQAEPESQDVDRV 459
S V + +E ++K + E +EE V + E ++ + V
Sbjct: 635 ESVVTGESEKAIEDISKEADNDEDDDEEEQEGDDDDDETEEEEEVVVAETENRAEGEELV 694
Query: 460 KEKLVEAKKPLQMIGVQLLKDSDQTTTTSKRSMKRSSRM-VEDDDDEDWFPEDPFEAFKE 518
K K +AKK LQMIGVQLLK+SD+ T KR KR+SRM +EDD DEDWFPEDPFEAFKE
Sbjct: 695 KNKAADAKKHLQMIGVQLLKESDEANRTKKRG-KRASRMTLEDDADEDWFPEDPFEAFKE 753
Query: 519 MRKRKVFDVSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLK--VIELGGTP 576
MR+RKVFDVSDMYTIAD WGWTWE++ NR P+KWSQEWEVELAI +M K VIELGG P
Sbjct: 754 MRERKVFDVSDMYTIADVWGWTWEKDFKNRTPRKWSQEWEVELAIVLMTKARVIELGGIP 813
Query: 577 TIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIV 636
TIGDCAVI+RAA+RAP+PSAFLKILQ THSLGY FGSPLYDEII+LCLD+GELDAA+AIV
Sbjct: 814 TIGDCAVILRAALRAPMPSAFLKILQTTHSLGYSFGSPLYDEIITLCLDIGELDAAIAIV 873
Query: 637 ADMETTGIAVPDQTLDRVITSRQTGET 663
ADMETTGI VPDQTLD+VI++RQ+ E
Sbjct: 874 ADMETTGITVPDQTLDKVISARQSNEN 900
>gi|6721160|gb|AAF26788.1|AC016829_12 hypothetical protein [Arabidopsis thaliana]
Length = 913
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/686 (76%), Positives = 588/686 (85%), Gaps = 27/686 (3%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI EDCKAGDHSNAL+I+YEMEAAGRMATTFHFN LLS QATCGIPEVA+ATFENMEYGE
Sbjct: 218 MIEEDCKAGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAYATFENMEYGE 277
Query: 61 D-YMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+MKPDTETYN VIQAYTRAESYDRVQDVAELLGMMVEDHKR+QPNVKTYALLVECFTK
Sbjct: 278 GLFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDHKRVQPNVKTYALLVECFTK 337
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
YC V EAIRHFRAL+N+EGGT +LHN GNF DPLSLYLRALCREGRI+EL++AL+AM KD
Sbjct: 338 YCVVKEAIRHFRALKNFEGGTVILHNAGNFEDPLSLYLRALCREGRIVELIDALDAMRKD 397
Query: 180 NQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRG 239
NQP+PPRAMI+SRKYRTLVSSWIEPLQEEAELGYEIDY+ARYI EGGLTGERKRWVPRRG
Sbjct: 398 NQPIPPRAMIMSRKYRTLVSSWIEPLQEEAELGYEIDYLARYIEEGGLTGERKRWVPRRG 457
Query: 240 KTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVE 299
KTPLDPDA GFIYSNP+ETSFKQRCLED K +HRKLLRTLQ+EG VLGD SESDY+RV
Sbjct: 458 KTPLDPDASGFIYSNPIETSFKQRCLEDWKVHHRKLLRTLQSEGLPVLGDASESDYMRVV 517
Query: 300 ERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
ERL+ +IKGP ++LKPKAASKMVVSELKEEL+AQGLP DGTRNVLYQRVQKARRIN+SR
Sbjct: 518 ERLRNIIKGPALNLLKPKAASKMVVSELKEELEAQGLPIDGTRNVLYQRVQKARRINKSR 577
Query: 360 GRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESE 419
GRPLWVPP+EEEEEEVDEEVD+LI RIKL EG+TEFWKRRFLGEGL + +VE E+
Sbjct: 578 GRPLWVPPIEEEEEEVDEEVDDLICRIKLHEGDTEFWKRRFLGEGL---IETSVESKETT 634
Query: 420 LSDVLDDDVTDVEYVAK-------------------DEEADEEEEVEQAEPESQDVDRVK 460
S V + +E ++K DE +EE V + E ++ D VK
Sbjct: 635 ESVVTGESEKAIEDISKEADNEEDDDEEEQEGDEDDDENEEEEVVVPETENRAEGEDLVK 694
Query: 461 EKLVEAKKPLQMIGVQLLKDSDQTTTTSKRSMKRSSRM-VEDDDDEDWFPEDPFEAFKEM 519
K +AKK LQMIGVQLLK+SD+ T KR KR+SRM +EDD DEDWFPE+PFEAFKEM
Sbjct: 695 NKAADAKKHLQMIGVQLLKESDEANRTKKRG-KRASRMTLEDDADEDWFPEEPFEAFKEM 753
Query: 520 RKRKVFDVSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLK--VIELGGTPT 577
R+RKVFDV+DMYTIAD WGWTWE++ N+ P+KWSQEWEVELAI +M K VIELGG PT
Sbjct: 754 RERKVFDVADMYTIADVWGWTWEKDFKNKTPRKWSQEWEVELAIVLMTKAGVIELGGIPT 813
Query: 578 IGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVA 637
IGDCAVI+RAA+RAP+PSAFLKILQ THSLGY FGSPLYDEII+LCLDLGELDAA+AIVA
Sbjct: 814 IGDCAVILRAALRAPMPSAFLKILQTTHSLGYSFGSPLYDEIITLCLDLGELDAAIAIVA 873
Query: 638 DMETTGIAVPDQTLDRVITSRQTGET 663
DMETTGI VPDQTLD+VI++RQ+ E+
Sbjct: 874 DMETTGITVPDQTLDKVISARQSNES 899
>gi|356533668|ref|XP_003535382.1| PREDICTED: uncharacterized protein LOC100802355 [Glycine max]
Length = 887
Score = 1030 bits (2663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/670 (80%), Positives = 598/670 (89%), Gaps = 13/670 (1%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I EDCK GDHSNAL+IAYEMEAAGRMATTFHFN LLS QATCGIPE+AFATFENMEYGE
Sbjct: 205 LIQEDCKVGDHSNALDIAYEMEAAGRMATTFHFNCLLSVQATCGIPEIAFATFENMEYGE 264
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
DYMKPDTETYN VIQAYTRAESYDRVQDVAELLGMMVEDHKR+QPN KT+ALLVECFTKY
Sbjct: 265 DYMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDHKRIQPNAKTHALLVECFTKY 324
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
C V EAIRHFRAL+N+EGG +VLHNEGN GDPLSLYLRALCREGRI+E+LEALEAMAKDN
Sbjct: 325 CVVREAIRHFRALKNFEGGIEVLHNEGNHGDPLSLYLRALCREGRIVEMLEALEAMAKDN 384
Query: 181 QPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRGK 240
QP+P RAMILSRKYRTLVSSWIEPLQEEAE+GYEIDYI+RYI EGGLTGERKRWVPRRGK
Sbjct: 385 QPIPSRAMILSRKYRTLVSSWIEPLQEEAEIGYEIDYISRYIDEGGLTGERKRWVPRRGK 444
Query: 241 TPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLG-DVSESDYVRVE 299
TPLDPDA GFIYSNPMETSFKQRC+E+ K +++KLL+TLQNEG A LG DVSE DY+RV+
Sbjct: 445 TPLDPDAHGFIYSNPMETSFKQRCMEELKLHNKKLLKTLQNEGLAALGDDVSEFDYIRVQ 504
Query: 300 ERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
ERLKKL+KGPEQ+VLKPKAASKM+VSELKEELDAQGLP DGTRNVLYQRVQKARRINRSR
Sbjct: 505 ERLKKLMKGPEQNVLKPKAASKMLVSELKEELDAQGLPIDGTRNVLYQRVQKARRINRSR 564
Query: 360 GRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESE 419
GRPLWVPPVEEEEEEVDEE+D LISRIKLEEGNTEFWKRRFLGEGLNG + + +S+
Sbjct: 565 GRPLWVPPVEEEEEEVDEELDALISRIKLEEGNTEFWKRRFLGEGLNGDQEMPTDAVQSD 624
Query: 420 LSDVLDDDVTDVEYVAK---------DEEADEEEEVEQAEPESQDVDRVKEKLVEAKKPL 470
+ +VL DDV +E AK +EE E+ E E E+QDV+R+KEK VEAK+PL
Sbjct: 625 VPEVL-DDVDAIEDAAKEVEDDEADDEEEEAEQAEEEVEPAENQDVNRIKEKEVEAKRPL 683
Query: 471 QMIGVQLLKDSDQTTTTSKRSMKRSSRM-VEDDDDEDWFPEDPFEAFKEMRKRKVFDVSD 529
QMIGVQLLKD DQ T TSK+ KRS R+ VEDDDD+DW P + FEAFKEMRKRK+FDVSD
Sbjct: 684 QMIGVQLLKDIDQPTATSKK-FKRSRRVQVEDDDDDDWLPLNLFEAFKEMRKRKIFDVSD 742
Query: 530 MYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAI 589
MYT+ADAWGWTWERE+ N+PP++WSQE EVELAI++M KVIELGG PTIGDCA+I+RAAI
Sbjct: 743 MYTLADAWGWTWERELKNKPPRRWSQEREVELAIKVMHKVIELGGRPTIGDCAMILRAAI 802
Query: 590 RAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQ 649
RAPLPSAFL ILQ TH+LG+ FGSPLYDE ISLC+DLGELDAAVA+VAD+ETTGI+V D
Sbjct: 803 RAPLPSAFLTILQTTHALGFKFGSPLYDETISLCVDLGELDAAVAVVADLETTGISVSDH 862
Query: 650 TLDRVITSRQ 659
TLDRVI+++Q
Sbjct: 863 TLDRVISAKQ 872
>gi|356574857|ref|XP_003555560.1| PREDICTED: uncharacterized protein LOC100807191 [Glycine max]
Length = 887
Score = 1030 bits (2662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/669 (81%), Positives = 595/669 (88%), Gaps = 11/669 (1%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I EDCKAGDHSNAL+IAYEMEAAGRMATTFHFN LLS QATCGIPE+AFATFENMEYGE
Sbjct: 205 LIEEDCKAGDHSNALDIAYEMEAAGRMATTFHFNCLLSVQATCGIPEIAFATFENMEYGE 264
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
DYMKPDTETYN VIQAYTRAESYDRVQDVAELLGMMVEDHKR+QPN KT+ALLVECFTKY
Sbjct: 265 DYMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDHKRIQPNAKTHALLVECFTKY 324
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
C V EAIRHFRAL+N+EGG KVLHNEGN GDPLSLYLRALCREGRI+E+LEALEAMAKDN
Sbjct: 325 CVVREAIRHFRALKNFEGGIKVLHNEGNHGDPLSLYLRALCREGRIVEMLEALEAMAKDN 384
Query: 181 QPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRGK 240
QP+P RAMILSRKYRTLVSSWIEPLQEEAELGYEIDYI+RYI EGGLTGERKRWVPRRGK
Sbjct: 385 QPIPSRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYISRYIDEGGLTGERKRWVPRRGK 444
Query: 241 TPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGD-VSESDYVRVE 299
TPLDPDA GFIYSNPMETSFKQRCLE+ K +++KLL+TLQNEG A LGD VSESDY+RV+
Sbjct: 445 TPLDPDAHGFIYSNPMETSFKQRCLEELKLHNKKLLKTLQNEGLAALGDGVSESDYIRVQ 504
Query: 300 ERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
ERLKKLIKGPEQ+VLKPKAASKM+VSELKEELDAQGLP DG RNVLYQRVQKARRINRSR
Sbjct: 505 ERLKKLIKGPEQNVLKPKAASKMLVSELKEELDAQGLPIDGNRNVLYQRVQKARRINRSR 564
Query: 360 GRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESE 419
GRPLWVPPVEEEEEEVDEE+D LIS IKLEEGNTEFWKRRFLGEGLNG + + ESE
Sbjct: 565 GRPLWVPPVEEEEEEVDEELDALISHIKLEEGNTEFWKRRFLGEGLNGDQEMPTDAAESE 624
Query: 420 LSDVLDDDVTDVEYVAK---------DEEADEEEEVEQAEPESQDVDRVKEKLVEAKKPL 470
+ +VL DDV +E AK DEE E+ E E E+QDV+R+KEK VEAK+PL
Sbjct: 625 VPEVL-DDVDAIEDAAKEVEDDEADDDEEEAEQAEEEVEPAENQDVNRIKEKEVEAKRPL 683
Query: 471 QMIGVQLLKDSDQTTTTSKRSMKRSSRMVEDDDDEDWFPEDPFEAFKEMRKRKVFDVSDM 530
QMIGVQLLKD DQ T TSK+ + VEDDDD+DW P D FEAF+EMRKRK+FDVSDM
Sbjct: 684 QMIGVQLLKDIDQPTATSKKFKRSRKVQVEDDDDDDWLPLDLFEAFEEMRKRKIFDVSDM 743
Query: 531 YTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIR 590
YT+ADAWGWTWERE+ +PP++WSQEWEVELAI++M KVIELGG PTIGDCA+I+RAAIR
Sbjct: 744 YTLADAWGWTWERELKKKPPRRWSQEWEVELAIKVMQKVIELGGRPTIGDCAMILRAAIR 803
Query: 591 APLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQT 650
APLPSAFL ILQ THSLG+ FGSPLYDEIISLC+DLGELDAAVA+VAD+ETTGI+V D T
Sbjct: 804 APLPSAFLTILQTTHSLGFKFGSPLYDEIISLCVDLGELDAAVAVVADLETTGISVSDLT 863
Query: 651 LDRVITSRQ 659
LDRVI+++Q
Sbjct: 864 LDRVISAKQ 872
>gi|224144652|ref|XP_002325363.1| predicted protein [Populus trichocarpa]
gi|222862238|gb|EEE99744.1| predicted protein [Populus trichocarpa]
Length = 887
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/680 (78%), Positives = 596/680 (87%), Gaps = 12/680 (1%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI EDCK GDHSNAL+IAY ME AGRMATTFHFN LLS QATCGIPE++FATFENMEYGE
Sbjct: 210 MIEEDCKVGDHSNALDIAYAMEEAGRMATTFHFNCLLSVQATCGIPEISFATFENMEYGE 269
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
DYMKPDTE+YN VIQAYTRAESYDRVQDVAELLGMMVEDHKR+QPNVKTYALLVECF+KY
Sbjct: 270 DYMKPDTESYNWVIQAYTRAESYDRVQDVAELLGMMVEDHKRIQPNVKTYALLVECFSKY 329
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
C V EAIRHFRAL+ +EGGTK LHNEG FGDPLSLYLRALCREGRI++LLEALEAMA+DN
Sbjct: 330 CVVREAIRHFRALRKFEGGTKALHNEGKFGDPLSLYLRALCREGRIVDLLEALEAMAEDN 389
Query: 181 QPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRGK 240
QP+PPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDY+ARY++EGGLTGERKRWVPRRGK
Sbjct: 390 QPIPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYVARYVAEGGLTGERKRWVPRRGK 449
Query: 241 TPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVEE 300
TPLDPD GFIYSNPMETS KQRCLED K +HRKLL+ L+NEG A LGD SESDY+RVEE
Sbjct: 450 TPLDPDCDGFIYSNPMETSLKQRCLEDWKAHHRKLLKMLRNEGLAALGDASESDYLRVEE 509
Query: 301 RLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSRG 360
RL+K+I+GP+++VLKPKAASKM+VSELK+EL+AQGLP DGTRNVLYQRVQKARRINRSRG
Sbjct: 510 RLRKIIRGPDRNVLKPKAASKMIVSELKDELEAQGLPIDGTRNVLYQRVQKARRINRSRG 569
Query: 361 RPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESEL 420
RPLWVPPVEEEEEEVDEEVDELISRI+L EG+TEFWKRRFLGEG NG H K V+M+ SEL
Sbjct: 570 RPLWVPPVEEEEEEVDEEVDELISRIQLHEGDTEFWKRRFLGEGFNGNHVKPVDMETSEL 629
Query: 421 SDVLDDDVTDV---------EYVAKDEEADEEEEVEQAEPESQDVDR-VKEKLVEAKKPL 470
D LD+D D E ++ + + E EVE + ESQD +R VK K EAKKPL
Sbjct: 630 PDELDEDEDDDDDDVEDVAKEVEDEEADEEGEVEVEVEQTESQDAERIVKAKEAEAKKPL 689
Query: 471 QMIGVQLLKDSDQTTTTSKRSMKRSSRMVEDDDDEDWFPEDPFEAFKEMRKRKVFDVSDM 530
QMIGVQLLKDSDQTT SK+S + + + DDDD+DWFPED EAFKEMR RKVFDV DM
Sbjct: 690 QMIGVQLLKDSDQTTRMSKKSRR-RAARLADDDDDDWFPEDILEAFKEMRNRKVFDVEDM 748
Query: 531 YTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIR 590
Y IADAWGWTWEREI RP Q+WSQEWEVELAIQ+MLK +LGGTPTIGDCA+I+RAAIR
Sbjct: 749 YLIADAWGWTWEREIKKRPLQRWSQEWEVELAIQLMLKA-KLGGTPTIGDCAMILRAAIR 807
Query: 591 APLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQT 650
AP+PSAFLKILQ THSLGY FGS LYDEIISLC+DLGELDAA+AIVAD+ET GIAVPDQT
Sbjct: 808 APMPSAFLKILQTTHSLGYQFGSSLYDEIISLCVDLGELDAAIAIVADLETAGIAVPDQT 867
Query: 651 LDRVITSRQTGETSVDDASS 670
LDRVI+++Q E++ ++ S
Sbjct: 868 LDRVISAKQAPESAAEETLS 887
>gi|357441259|ref|XP_003590907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479955|gb|AES61158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 2047
Score = 1016 bits (2626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/725 (72%), Positives = 589/725 (81%), Gaps = 59/725 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I EDCKAGDHSNALEI+YEMEAAGRMATTFHFN LLS QATCGIPE+AF TFENMEYGE
Sbjct: 200 LIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQATCGIPEIAFTTFENMEYGE 259
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
DYMKPDTETYN VIQAYTRA+SYDRVQDVAELLGMMVEDHKR+QPNVKT+ALLVECFTKY
Sbjct: 260 DYMKPDTETYNWVIQAYTRADSYDRVQDVAELLGMMVEDHKRVQPNVKTHALLVECFTKY 319
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
C V EAIRHFRAL+N+EGGTK+LH +GN GDPLSLYLRALCREGRII++LEALEAMA DN
Sbjct: 320 CVVREAIRHFRALKNFEGGTKILHMDGNHGDPLSLYLRALCREGRIIDMLEALEAMANDN 379
Query: 181 QPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRGK 240
Q +PPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARY+ EGGLTGERKRWVPR GK
Sbjct: 380 QQIPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYVEEGGLTGERKRWVPRSGK 439
Query: 241 TPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGD-VSESDYVRVE 299
TPLDPDA GFIYSNPMETSFKQRCLE+ K YH+KLL+ L+ EG LGD SESDYVRV
Sbjct: 440 TPLDPDADGFIYSNPMETSFKQRCLEEKKVYHKKLLKKLRYEGIVALGDGASESDYVRVI 499
Query: 300 ERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
E LKK+IKGPEQ+ LKPKAASKM+V+ELKEEL+AQGLP DGTRNVLYQRVQKARRIN+SR
Sbjct: 500 EWLKKIIKGPEQNALKPKAASKMLVNELKEELEAQGLPIDGTRNVLYQRVQKARRINQSR 559
Query: 360 GRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESE 419
GRPLWVPP+E EEEEVDEE++ LISRIKLEEGNTE+WKRRFLGEGLNG + A++ ESE
Sbjct: 560 GRPLWVPPIEVEEEEVDEELEALISRIKLEEGNTEYWKRRFLGEGLNGDNGNAMDEGESE 619
Query: 420 LSDVLDDDVTDV-----------EYVAKDEEADEEEEVEQAEPESQDVDRVKEKLVEAKK 468
DV D DV E +EE E+ E E A+ E+QDV+R+KEK VE+KK
Sbjct: 620 SPDV--QDYIDVVGDDAKEAEDDEADEDEEEEVEQIEEEIAQVENQDVERIKEKEVESKK 677
Query: 469 PLQMIGVQLLKDSDQTTTTSKRSMKRSS--RMVEDDDDEDWFPEDPFEAFKEMRKRKVFD 526
PLQMIGVQLLKD ++ + T K+S +R S MV+DD D+DWFP D FEAFKEMR R+VFD
Sbjct: 678 PLQMIGVQLLKDFNEPSATFKKSSRRRSRRNMVDDDADDDWFPLDIFEAFKEMRNRRVFD 737
Query: 527 VSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLK------------------ 568
VSDMYT+ADAWGWTWE+E+ NRPP +WSQEWEV+LAI++M K
Sbjct: 738 VSDMYTLADAWGWTWEKELKNRPPHRWSQEWEVDLAIKVMQKATVANTPLDKLNKKEIVR 797
Query: 569 -------------------------VIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQK 603
VI+LGGTPTIGDCAVI+RAAI APLPSAFL ILQ
Sbjct: 798 AVILSMCKELKVGYVVRIKYGDNAAVIQLGGTPTIGDCAVILRAAISAPLPSAFLTILQT 857
Query: 604 THSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDRVITSRQTGET 663
TH LGY FG PLYDE+ISLCLDLGELDAAVA+VAD+ETTGI V DQTLDRVI+++Q +
Sbjct: 858 THGLGYKFGRPLYDEVISLCLDLGELDAAVAVVADLETTGILVSDQTLDRVISAKQGIDN 917
Query: 664 SVDDA 668
+D
Sbjct: 918 PSNDG 922
>gi|357140590|ref|XP_003571848.1| PREDICTED: uncharacterized protein LOC100838913 [Brachypodium
distachyon]
Length = 885
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/671 (70%), Positives = 558/671 (83%), Gaps = 16/671 (2%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG- 59
+I EDCKAGDHSNAL +AY+MEAAGRMATTFHFN LLS QATCGIPE+AF+T+ENMEYG
Sbjct: 216 LIEEDCKAGDHSNALTVAYQMEAAGRMATTFHFNCLLSVQATCGIPEIAFSTYENMEYGG 275
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
EDYMKPDTE+YN VIQA+TRA ++DR DVAELLGMMVED+KR+QPN +TYALLVECFTK
Sbjct: 276 EDYMKPDTESYNWVIQAFTRASAHDRAPDVAELLGMMVEDYKRIQPNARTYALLVECFTK 335
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
YC V EAIRHFRAL+ GGT VL+NEGN GDPLSLYLR+LC +GR ELL+ALEAMA D
Sbjct: 336 YCMVNEAIRHFRALRRIPGGTTVLYNEGNCGDPLSLYLRSLCLDGRADELLDALEAMADD 395
Query: 180 NQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRG 239
NQ + PRAMIL+RKYRTLVSSWIEPLQEEA++G+EIDY+ARYI EGGLTGERKRWVPRRG
Sbjct: 396 NQTIAPRAMILNRKYRTLVSSWIEPLQEEADVGFEIDYVARYIEEGGLTGERKRWVPRRG 455
Query: 240 KTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVE 299
KTPLDPD GF YSNP+ETSFK RC E+ K YHR+LL TL+NEGP +LGDVSE D RV
Sbjct: 456 KTPLDPDEFGFAYSNPIETSFKLRCFEELKLYHRRLLITLRNEGPGILGDVSEDDVRRVV 515
Query: 300 ERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
ERLKKL+ GP+++V+KPKAASKMVVSELK EL+AQGLPTDG R VLYQRVQKARRINRSR
Sbjct: 516 ERLKKLVVGPKKNVVKPKAASKMVVSELKIELEAQGLPTDGNRQVLYQRVQKARRINRSR 575
Query: 360 GRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGR-HDKAVEMDES 418
G PLWVPPVE++EE EE+DE+ISRIKLE+GNTEFWKRRFLGE N + + E D
Sbjct: 576 GIPLWVPPVEDDEEVD-EELDEMISRIKLEDGNTEFWKRRFLGETRNHLCEEDSKEEDPD 634
Query: 419 ELSDVLDDDVTDVEYVAKDEEADE---EEEVEQAEPESQDVDRVKEKLVEAKKP---LQM 472
++ DDD D + AK+ + DE EE E+ + ++ D D K+K AK P LQM
Sbjct: 635 LDDELDDDDDDDDDDSAKEADEDEIYDEEVAERTQNQAGD-DETKDK--PAKGPNQHLQM 691
Query: 473 IGVQLLKDSDQTTTTSKRSMKRSSRMVEDDDDEDWFPEDPFEAFKEMRKRKVFDVSDMYT 532
IGVQLLKD ++T+ ++K+ K + E DDDEDWFPEDP EAFK MR+ ++FDVSDMYT
Sbjct: 692 IGVQLLKDLEKTSVSTKKLKK----IPEIDDDEDWFPEDPIEAFKVMRETRMFDVSDMYT 747
Query: 533 IADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAP 592
ADAWGWTWEREI + P+KWSQEWEVELAI+IM KVI+LGGTPTIGDCA+I+RAA++AP
Sbjct: 748 TADAWGWTWEREIKKKMPRKWSQEWEVELAIKIMNKVIQLGGTPTIGDCAIILRAAMKAP 807
Query: 593 LPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLD 652
+PS F+ ILQ TH+LG+ FGSPLYDE+I LCLDL E+DAA+A+VA+MET GI V D+TLD
Sbjct: 808 VPSTFMTILQTTHNLGHKFGSPLYDEVILLCLDLEEIDAAIAVVAEMETNGIKVLDETLD 867
Query: 653 RVITSRQTGET 663
RV++++Q+G +
Sbjct: 868 RVLSAKQSGNS 878
>gi|22758327|gb|AAN05531.1| putative DNA binding domain containing protein [Oryza sativa
Japonica Group]
gi|31432536|gb|AAP54158.1| SAP domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 898
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/670 (71%), Positives = 556/670 (82%), Gaps = 11/670 (1%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG- 59
+I EDCKAGDHSNAL +AY+MEA+GRMATTFHFN LLS QATCGIPE+AFATFENMEYG
Sbjct: 225 LIEEDCKAGDHSNALTVAYKMEASGRMATTFHFNCLLSVQATCGIPEIAFATFENMEYGG 284
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E YMKPDTE+YN VIQA+TRA SYDR DVAELLGMMVEDHKR+QPN +TYALLVECFTK
Sbjct: 285 EGYMKPDTESYNWVIQAFTRATSYDRAGDVAELLGMMVEDHKRIQPNARTYALLVECFTK 344
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
Y V EAIRHFRAL+ GGTKVL+NEGN GDPLSLYLR+LC +GR ELLEALEAM+ D
Sbjct: 345 YSMVNEAIRHFRALRRIPGGTKVLYNEGNCGDPLSLYLRSLCLDGRADELLEALEAMSND 404
Query: 180 NQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRG 239
Q + PRAMIL+RKYRTLVS+WIEPLQEEA++G+EIDY+ARYI EGGLTGERKRWVPRRG
Sbjct: 405 GQTIAPRAMILNRKYRTLVSTWIEPLQEEADVGFEIDYVARYIEEGGLTGERKRWVPRRG 464
Query: 240 KTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVE 299
KTPLDPD GF YSNP+ETSFKQRC E+ K YHRKLL TL+NEGP +LGDVSE D RV
Sbjct: 465 KTPLDPDEFGFAYSNPIETSFKQRCFEELKLYHRKLLITLRNEGPGILGDVSEDDVRRVI 524
Query: 300 ERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
ERLKKL+ GP+++V+KPKAASKMVVSELK EL+AQGLPTDGTR VLYQRVQKARRINRSR
Sbjct: 525 ERLKKLVVGPKKNVVKPKAASKMVVSELKTELEAQGLPTDGTRQVLYQRVQKARRINRSR 584
Query: 360 GRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGR----HDKAVEM 415
G PLWV P E+EEEVDEE+DELISRIKLE+GNTEFWKRRFLGE N +D+
Sbjct: 585 GIPLWV-PPVEDEEEVDEELDELISRIKLEDGNTEFWKRRFLGETRNYLCEEVNDEEDAD 643
Query: 416 DESELSDVLDDDVTDVEYVAKDEEADEEEEVEQAEPESQDVDRVKEKLVEA-KKPLQMIG 474
+ + D DD+ D + K EE + +EE + E+Q D K+K + K+ LQMIG
Sbjct: 644 LDDDELDDDDDEDDDDDDTTKGEEDEIDEEDAVEQTENQAGDETKDKPSKGPKQHLQMIG 703
Query: 475 VQLLKDSDQTTTTSKRSMKRSSRMVEDDDDEDWFPEDPFEAFKEMRKRKVFDVSDMYTIA 534
VQLLKD ++T+ +S K+S R+ E DDDEDWFPEDP EAFK MR+ ++FDVSDMYT A
Sbjct: 704 VQLLKDLEKTSVSS----KKSKRVPEIDDDEDWFPEDPIEAFKVMRETRLFDVSDMYTTA 759
Query: 535 DAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLP 594
DAWGWTWEREI N+ P+KWSQEWEVELAI+IM KVI+LGGTPTIGDCA+I+RAA+R PLP
Sbjct: 760 DAWGWTWEREIKNKMPRKWSQEWEVELAIKIMHKVIDLGGTPTIGDCAIILRAAMRVPLP 819
Query: 595 SAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDRV 654
SAF+ ILQ THSLGY FGSPLYDE I LCLDL E+DAA+A+VA+MET GI VPD+TLD+V
Sbjct: 820 SAFMTILQTTHSLGYKFGSPLYDEAILLCLDLEEIDAAIAVVAEMETNGIKVPDETLDKV 879
Query: 655 ITSRQTGETS 664
+ ++Q+G S
Sbjct: 880 LAAKQSGGNS 889
>gi|125575056|gb|EAZ16340.1| hypothetical protein OsJ_31803 [Oryza sativa Japonica Group]
Length = 764
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/670 (71%), Positives = 556/670 (82%), Gaps = 11/670 (1%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG- 59
+I EDCKAGDHSNAL +AY+MEA+GRMATTFHFN LLS QATCGIPE+AFATFENMEYG
Sbjct: 91 LIEEDCKAGDHSNALTVAYKMEASGRMATTFHFNCLLSVQATCGIPEIAFATFENMEYGG 150
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E YMKPDTE+YN VIQA+TRA SYDR DVAELLGMMVEDHKR+QPN +TYALLVECFTK
Sbjct: 151 EGYMKPDTESYNWVIQAFTRATSYDRAGDVAELLGMMVEDHKRIQPNARTYALLVECFTK 210
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
Y V EAIRHFRAL+ GGTKVL+NEGN GDPLSLYLR+LC +GR ELLEALEAM+ D
Sbjct: 211 YSMVNEAIRHFRALRRIPGGTKVLYNEGNCGDPLSLYLRSLCLDGRADELLEALEAMSND 270
Query: 180 NQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRG 239
Q + PRAMIL+RKYRTLVS+WIEPLQEEA++G+EIDY+ARYI EGGLTGERKRWVPRRG
Sbjct: 271 GQTIAPRAMILNRKYRTLVSTWIEPLQEEADVGFEIDYVARYIEEGGLTGERKRWVPRRG 330
Query: 240 KTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVE 299
KTPLDPD GF YSNP+ETSFKQRC E+ K YHRKLL TL+NEGP +LGDVSE D RV
Sbjct: 331 KTPLDPDEFGFAYSNPIETSFKQRCFEELKLYHRKLLITLRNEGPGILGDVSEDDVRRVI 390
Query: 300 ERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
ERLKKL+ GP+++V+KPKAASKMVVSELK EL+AQGLPTDGTR VLYQRVQKARRINRSR
Sbjct: 391 ERLKKLVVGPKKNVVKPKAASKMVVSELKTELEAQGLPTDGTRQVLYQRVQKARRINRSR 450
Query: 360 GRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGR----HDKAVEM 415
G PLWV P E+EEEVDEE+DELISRIKLE+GNTEFWKRRFLGE N +D+
Sbjct: 451 GIPLWV-PPVEDEEEVDEELDELISRIKLEDGNTEFWKRRFLGETRNYLCEEVNDEEDAD 509
Query: 416 DESELSDVLDDDVTDVEYVAKDEEADEEEEVEQAEPESQDVDRVKEKLVEA-KKPLQMIG 474
+ + D DD+ D + K EE + +EE + E+Q D K+K + K+ LQMIG
Sbjct: 510 LDDDELDDDDDEDDDDDDTTKGEEDEIDEEDAVEQTENQAGDETKDKPSKGPKQHLQMIG 569
Query: 475 VQLLKDSDQTTTTSKRSMKRSSRMVEDDDDEDWFPEDPFEAFKEMRKRKVFDVSDMYTIA 534
VQLLKD ++T+ +S K+S R+ E DDDEDWFPEDP EAFK MR+ ++FDVSDMYT A
Sbjct: 570 VQLLKDLEKTSVSS----KKSKRVPEIDDDEDWFPEDPIEAFKVMRETRLFDVSDMYTTA 625
Query: 535 DAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLP 594
DAWGWTWEREI N+ P+KWSQEWEVELAI+IM KVI+LGGTPTIGDCA+I+RAA+R PLP
Sbjct: 626 DAWGWTWEREIKNKMPRKWSQEWEVELAIKIMHKVIDLGGTPTIGDCAIILRAAMRVPLP 685
Query: 595 SAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDRV 654
SAF+ ILQ THSLGY FGSPLYDE I LCLDL E+DAA+A+VA+MET GI VPD+TLD+V
Sbjct: 686 SAFMTILQTTHSLGYKFGSPLYDEAILLCLDLEEIDAAIAVVAEMETNGIKVPDETLDKV 745
Query: 655 ITSRQTGETS 664
+ ++Q+G S
Sbjct: 746 LAAKQSGGNS 755
>gi|218184690|gb|EEC67117.1| hypothetical protein OsI_33922 [Oryza sativa Indica Group]
Length = 836
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/671 (71%), Positives = 558/671 (83%), Gaps = 12/671 (1%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG- 59
+I EDCKAGDHSNAL +AY+MEA+GRMATTFHFN LLS QATCGIPE+AFATFENMEYG
Sbjct: 162 LIEEDCKAGDHSNALTVAYKMEASGRMATTFHFNCLLSVQATCGIPEIAFATFENMEYGG 221
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E YMKPDTE+YN VIQA+TRA SYDR DVAELLGMMVEDHKR+QPN +TYALLVECFTK
Sbjct: 222 EGYMKPDTESYNWVIQAFTRATSYDRAGDVAELLGMMVEDHKRIQPNARTYALLVECFTK 281
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
Y V EAIRHFRAL+ GGTKVL+NEGN GDPLSLYLR+LC +GR ELLEALEAM+ D
Sbjct: 282 YSMVNEAIRHFRALRRIPGGTKVLYNEGNCGDPLSLYLRSLCLDGRADELLEALEAMSND 341
Query: 180 NQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRG 239
Q + PRAMIL+RKYRTLVS+WIEPLQEEA++G+EIDY+ARYI EGGLTGERKRWVPRRG
Sbjct: 342 GQTIAPRAMILNRKYRTLVSTWIEPLQEEADVGFEIDYVARYIEEGGLTGERKRWVPRRG 401
Query: 240 KTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVE 299
KTPLDPD GF YSNP+ETSFKQRC E+ K YHRKLL TL+NEGP +LGDVSE D RV
Sbjct: 402 KTPLDPDEFGFAYSNPIETSFKQRCFEELKLYHRKLLITLRNEGPGILGDVSEDDVRRVI 461
Query: 300 ERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
ERLKKL+ GP+++V+KPKAASKMVVSELK EL+AQGLPTDGTR VLYQRVQKARRINRSR
Sbjct: 462 ERLKKLVVGPKKNVVKPKAASKMVVSELKTELEAQGLPTDGTRQVLYQRVQKARRINRSR 521
Query: 360 GRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKA-----VE 414
G PLWV P E+EEEVDEE+DELISRIKLE+GNTEFWKRRFLGE N ++ +
Sbjct: 522 GIPLWV-PPVEDEEEVDEELDELISRIKLEDGNTEFWKRRFLGETRNYLCEEVNDEEDAD 580
Query: 415 MDESELSDVLDDDVTDVEYVAKDEEADEEEEVEQAEPESQDVDRVKEKLVEA-KKPLQMI 473
+D+ EL D DD+ D + K EE + +EE + E+Q D K+K + K+ LQMI
Sbjct: 581 LDDDELDDDDDDEDDDDDDTTKGEEDEIDEEDAVEQTENQAGDETKDKPSKGPKQHLQMI 640
Query: 474 GVQLLKDSDQTTTTSKRSMKRSSRMVEDDDDEDWFPEDPFEAFKEMRKRKVFDVSDMYTI 533
GVQLLKD ++T+ +S K+S R+ E DDDEDWFPEDP EAFK MR+ ++FDVSDMYT
Sbjct: 641 GVQLLKDLEKTSVSS----KKSKRVPEIDDDEDWFPEDPIEAFKVMRETRLFDVSDMYTT 696
Query: 534 ADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPL 593
ADAWGWTWERE N+ P+KWSQEWEVELAI+IM KVI+LGGTPTIGDCA+I+RAA+R PL
Sbjct: 697 ADAWGWTWERERKNKMPRKWSQEWEVELAIKIMHKVIDLGGTPTIGDCAIILRAAMRVPL 756
Query: 594 PSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDR 653
PSAF+ ILQ THSLGY FGSPLYDE I LCLDL E+DAA+A+VA+MET GI VPD+TLD+
Sbjct: 757 PSAFMTILQTTHSLGYKFGSPLYDEAILLCLDLEEIDAAIAVVAEMETNGIKVPDETLDK 816
Query: 654 VITSRQTGETS 664
V+ ++Q+G S
Sbjct: 817 VLAAKQSGGNS 827
>gi|449449687|ref|XP_004142596.1| PREDICTED: uncharacterized protein LOC101209618 [Cucumis sativus]
Length = 1177
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/579 (80%), Positives = 518/579 (89%), Gaps = 3/579 (0%)
Query: 86 VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHN 145
VQDVAELLGMMVEDHKRLQPN++TYALLVECFTKYC + EAIRHFRAL+ +EGGT LHN
Sbjct: 576 VQDVAELLGMMVEDHKRLQPNMRTYALLVECFTKYCVIREAIRHFRALRTFEGGTTALHN 635
Query: 146 EGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIEPL 205
EGNFGDPLSLYLRALCREGR++ELLEALEAMA+DNQ +PPRAMILSRKYR+LVSSWIEPL
Sbjct: 636 EGNFGDPLSLYLRALCREGRVVELLEALEAMARDNQQIPPRAMILSRKYRSLVSSWIEPL 695
Query: 206 QEEAELGYEIDYIARYISEGGLTGERKRWVPRRGKTPLDPDAVGFIYSNPMETSFKQRCL 265
QEEAE G+EIDYIARYI EGGLTGERKRWVPR+GKTPLDPDA GFIYSNPMETSFKQRCL
Sbjct: 696 QEEAEHGFEIDYIARYIEEGGLTGERKRWVPRKGKTPLDPDADGFIYSNPMETSFKQRCL 755
Query: 266 EDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVEERLKKLIKGPEQHVLKPKAASKMVVS 325
ED K YHRK+L+TLQNEG L D SE+DY RV ERL+K+IKGP+Q+VLKPKAASKM+VS
Sbjct: 756 EDWKMYHRKILKTLQNEGLVALRDASEADYHRVVERLRKIIKGPDQNVLKPKAASKMIVS 815
Query: 326 ELKEELDAQGLPTDGTRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEEVDEEVDELISR 385
ELKEEL+AQGLP DGTRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEEVDEE+DELISR
Sbjct: 816 ELKEELEAQGLPIDGTRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEEVDEELDELISR 875
Query: 386 IKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESELSDVLDDDVTDVEYVAK-DEEADEEE 444
IKL EGNTEFWKRRFLGEGL + K E D+S+ D L DDV +E VAK EE + EE
Sbjct: 876 IKLHEGNTEFWKRRFLGEGLYSNNVKPSEDDKSDPLDSL-DDVDTIEDVAKEIEEEEAEE 934
Query: 445 EVEQAEPESQDVDRVKEKLVEAKKPLQMIGVQLLKDSDQTTTTSKRSMKRSSRM-VEDDD 503
E E + E+QD +RV +K VEAKKPLQMIGVQLLKD DQ TTTSK+S +RSSR +EDD
Sbjct: 935 EEEVEQTENQDGERVIKKEVEAKKPLQMIGVQLLKDVDQPTTTSKKSRRRSSRASLEDDR 994
Query: 504 DEDWFPEDPFEAFKEMRKRKVFDVSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAI 563
DEDWFPED FEAFKE++KRKVFDVSDMYTIAD WGWTWERE+ NRPP++WSQEWEVELAI
Sbjct: 995 DEDWFPEDIFEAFKELQKRKVFDVSDMYTIADVWGWTWERELKNRPPRRWSQEWEVELAI 1054
Query: 564 QIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLC 623
+IM KVIELGG PTIGDCA+I+RAAI+APLPSAFLKILQ TH LGYVFGSPLYDE+I+LC
Sbjct: 1055 KIMHKVIELGGIPTIGDCAMILRAAIKAPLPSAFLKILQTTHGLGYVFGSPLYDEVITLC 1114
Query: 624 LDLGELDAAVAIVADMETTGIAVPDQTLDRVITSRQTGE 662
LDLGELDAA+AIVAD+ETTGI V D+TLDRVI++RQT +
Sbjct: 1115 LDLGELDAAIAIVADLETTGILVHDETLDRVISARQTND 1153
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 59/63 (93%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI EDCKAGDHSNALEI+YEMEAAGRMATTFHFN LLS QATCGIPE+AF+TFENMEYGE
Sbjct: 213 MIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQATCGIPEIAFSTFENMEYGE 272
Query: 61 DYM 63
Y+
Sbjct: 273 GYI 275
>gi|22165107|gb|AAM93724.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 730
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/486 (72%), Positives = 400/486 (82%), Gaps = 7/486 (1%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG- 59
+I EDCKAGDHSNAL +AY+MEA+GRMATTFHFN LLS QATCGIPE+AFATFENMEYG
Sbjct: 225 LIEEDCKAGDHSNALTVAYKMEASGRMATTFHFNCLLSVQATCGIPEIAFATFENMEYGG 284
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E YMKPDTE+YN VIQA+TRA SYDR DVAELLGMMVEDHKR+QPN +TYALLVECFTK
Sbjct: 285 EGYMKPDTESYNWVIQAFTRATSYDRAGDVAELLGMMVEDHKRIQPNARTYALLVECFTK 344
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
Y V EAIRHFRAL+ GGTKVL+NEGN GDPLSLYLR+LC +GR ELLEALEAM+ D
Sbjct: 345 YSMVNEAIRHFRALRRIPGGTKVLYNEGNCGDPLSLYLRSLCLDGRADELLEALEAMSND 404
Query: 180 NQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRG 239
Q + PRAMIL+RKYRTLVS+WIEPLQEEA++G+EIDY+ARYI EGGLTGERKRWVPRRG
Sbjct: 405 GQTIAPRAMILNRKYRTLVSTWIEPLQEEADVGFEIDYVARYIEEGGLTGERKRWVPRRG 464
Query: 240 KTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGDVSESDYVRVE 299
KTPLDPD GF YSNP+ETSFKQRC E+ K YHRKLL TL+NEGP +LGDVSE D RV
Sbjct: 465 KTPLDPDEFGFAYSNPIETSFKQRCFEELKLYHRKLLITLRNEGPGILGDVSEDDVRRVI 524
Query: 300 ERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
ERLKKL+ GP+++V+KPKAASKMVVSELK EL+AQGLPTDGTR VLYQRVQKARRINRSR
Sbjct: 525 ERLKKLVVGPKKNVVKPKAASKMVVSELKTELEAQGLPTDGTRQVLYQRVQKARRINRSR 584
Query: 360 GRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGR----HDKAVEM 415
G PLWV P E+EEEVDEE+DELISRIKLE+GNTEFWKRRFLGE N +D+
Sbjct: 585 GIPLWV-PPVEDEEEVDEELDELISRIKLEDGNTEFWKRRFLGETRNYLCEEVNDEEDAD 643
Query: 416 DESELSDVLDDDVTDVEYVAKDEEADEEEEVEQAEPESQDVDRVKEKLVEA-KKPLQMIG 474
+ + D DD+ D + K EE + +EE + E+Q D K+K + K+ LQMIG
Sbjct: 644 LDDDELDDDDDEDDDDDDTTKGEEDEIDEEDAVEQTENQAGDETKDKPSKGPKQHLQMIG 703
Query: 475 VQLLKD 480
VQLLKD
Sbjct: 704 VQLLKD 709
>gi|168014298|ref|XP_001759689.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689228|gb|EDQ75601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 803
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 325/662 (49%), Positives = 433/662 (65%), Gaps = 26/662 (3%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
GDH+N + + ME GRM+TTFH+N LL Q +P++ TFE M+YG D MKPDTE
Sbjct: 152 GDHANCISVLRLMEYGGRMSTTFHYNCLLRAQCMADVPDIIAMTFETMQYGRDEMKPDTE 211
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+YN V+Q+Y R + DR Q+V +LLG MVEDHKR+QPN +TYALLVECF+KY EA+R
Sbjct: 212 SYNWVLQSYVRHKFGDRCQEVIDLLGEMVEDHKRVQPNQRTYALLVECFSKYDHFNEAVR 271
Query: 129 HFRALQNYEGGTKVLHNEGNF--GDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPR 186
HFRAL G T L NEG+ DPLSLY+R LC EGR +L+E LE+M +DNQP+P R
Sbjct: 272 HFRALVRNPGSTTFLFNEGHGRDTDPLSLYIRGLCLEGRAGDLVEVLESMVRDNQPLPAR 331
Query: 187 AMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRGKTPLDPD 246
A++++++ RTLVSSWIEPLQ+E +LGY+IDY+AR+++EGG G RKR+ G D
Sbjct: 332 ALLVNKRGRTLVSSWIEPLQQEPDLGYDIDYVARFLAEGGGDGTRKRFTDSVGGRFKAVD 391
Query: 247 AVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLG-DVSESDYVRVEERLKKL 305
GF Y+ P+E S+K K Y+ +LLR L+ EG LG +E+D RV ERLKK
Sbjct: 392 DDGFAYAAPLEVSYKSFLTHMRKNYNLRLLRKLRLEGVRALGPGATEADLHRVIERLKKD 451
Query: 306 IKGPEQH-VLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSRGRPLW 364
+G + + KPKAASKM+VSELK+EL+AQGLPT+GTR VLYQRVQKARRIN++RGRPLW
Sbjct: 452 TRGDVGYQIRKPKAASKMLVSELKDELEAQGLPTEGTRPVLYQRVQKARRINKARGRPLW 511
Query: 365 VPPVEEE-EEEVDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESE-LSD 422
VPP E+E +E DEE+D + R+ L+ N+EFW++RF+G A +DE E L
Sbjct: 512 VPPTEDELDERHDEEIDMFMERLTLKNENSEFWRKRFIG--------GAGILDEEESLYQ 563
Query: 423 VLDDDVTDVEYVAKDEEADEEEEVEQAEPESQDVDRVKEKLVEAKKPLQMIGVQLLKDSD 482
D + DE+ D+E+E++ + V+ E+ + +P +M+ +QLLK+
Sbjct: 564 ASADSDEETFADDDDEDDDDEDELQVTDSADDLVEDGGEE--DVGEPPEMLAMQLLKNKK 621
Query: 483 QTTTTSKRSMKRSSRMVEDDDDEDWFPEDPFEAFKEMRKRKVFDVSDMYTIADAWGWTWE 542
+ K ED + +W E M++R + D S YTIAD WGWTWE
Sbjct: 622 EEVPVVKE---------EDREGSEWLGLTLDEKITFMKERGM-DESAFYTIADVWGWTWE 671
Query: 543 REITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQ 602
+EI +R P+ WSQE EV+LAI+IMLKV LGG PTI D +++RAA+R P P A + +LQ
Sbjct: 672 QEIRDRVPEDWSQEKEVQLAIEIMLKVQALGGIPTINDMGILVRAAMRTPWPEALVSLLQ 731
Query: 603 KTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDRVITSRQTGE 662
+H LGY FGS LY E + LCL LGE DAA+ I++DME G+A P L V+ Q +
Sbjct: 732 HSHKLGYAFGSKLYAEAVRLCLSLGEKDAAINIISDMEDMGVAAPPDLLTDVLEETQFRQ 791
Query: 663 TS 664
S
Sbjct: 792 IS 793
>gi|449533258|ref|XP_004173593.1| PREDICTED: uncharacterized LOC101209618, partial [Cucumis sativus]
Length = 378
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 298/379 (78%), Positives = 330/379 (87%), Gaps = 3/379 (0%)
Query: 221 YISEGGLTGERKRWVPRRGKTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQ 280
YI EGGLTGERKRWVPR+GKTPLDPDA GFIYSNPMETSFKQRCLED K YHRK+L+TLQ
Sbjct: 1 YIEEGGLTGERKRWVPRKGKTPLDPDADGFIYSNPMETSFKQRCLEDWKMYHRKILKTLQ 60
Query: 281 NEGPAVLGDVSESDYVRVEERLKKLIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDG 340
NEG L D SE+DY RV ERL+K+IKGP+Q+VLKPKAASKM+VSELKEEL+AQGLP DG
Sbjct: 61 NEGLVALRDASEADYHRVVERLRKIIKGPDQNVLKPKAASKMIVSELKEELEAQGLPIDG 120
Query: 341 TRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRF 400
TRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEEVDEE+DELISRIKL EGNTEFWKRRF
Sbjct: 121 TRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEEVDEELDELISRIKLHEGNTEFWKRRF 180
Query: 401 LGEGLNGRHDKAVEMDESELSDVLDDDVTDVEYVAK-DEEADEEEEVEQAEPESQDVDRV 459
LGEGL + K E D+S+ D L DDV +E VAK EE + EEE E + E+QD +RV
Sbjct: 181 LGEGLYSNNVKPSEDDKSDPLDSL-DDVDTIEDVAKEIEEEEAEEEEEVEQTENQDGERV 239
Query: 460 KEKLVEAKKPLQMIGVQLLKDSDQTTTTSKRSMKRSSRM-VEDDDDEDWFPEDPFEAFKE 518
+K VEAKKPLQMIGVQLLKD DQ TTTSK+S +RSSR +EDD DEDWFPED FEAFKE
Sbjct: 240 IKKEVEAKKPLQMIGVQLLKDVDQPTTTSKKSRRRSSRASLEDDRDEDWFPEDIFEAFKE 299
Query: 519 MRKRKVFDVSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTI 578
++KRKVFDVSDMYTIAD WGWTWERE+ NRPP++WSQEWEVELAI+IM KVIELGG PTI
Sbjct: 300 LQKRKVFDVSDMYTIADVWGWTWERELKNRPPRRWSQEWEVELAIKIMHKVIELGGIPTI 359
Query: 579 GDCAVIIRAAIRAPLPSAF 597
GDCA+I+RAAI+APLPSAF
Sbjct: 360 GDCAMILRAAIKAPLPSAF 378
>gi|302771664|ref|XP_002969250.1| hypothetical protein SELMODRAFT_170612 [Selaginella moellendorffii]
gi|300162726|gb|EFJ29338.1| hypothetical protein SELMODRAFT_170612 [Selaginella moellendorffii]
Length = 810
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 285/674 (42%), Positives = 425/674 (63%), Gaps = 39/674 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++ E+CK G H A+ I ME+ GR+ATTFH+N LL Q P++A TFE M+Y
Sbjct: 154 LVEENCKTGKHGVAINILRSMESRGRLATTFHYNCLLLAQGNANFPDIAEDTFEEMQYLR 213
Query: 61 DY----MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVEC 116
KPDTE++N +IQA TR ++ +RV +V L+G M E + +++PN +TYAL+VEC
Sbjct: 214 RESIPDTKPDTESFNLMIQAQTRCDNGERVHEVIVLIGHMTELYPQVKPNARTYALIVEC 273
Query: 117 FTKYCAVTEAIRHFRALQN-YEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEA 175
+ K+ + EA+RHFRAL + G VLH +G GDPLSL +R+LC EGRI++L+E L+
Sbjct: 274 YVKFNFMDEAMRHFRALTKLFPGSLHVLHCDGKHGDPLSLLIRSLCLEGRIVQLVEVLDL 333
Query: 176 MAKDNQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWV 235
M ++ + PRAM ++RK RTLVSSWIEP+QEEA++G EID++ARYI+EGGLTG R+RW
Sbjct: 334 MLQEGLKLTPRAMFMNRKGRTLVSSWIEPIQEEADIGCEIDFVARYIAEGGLTGTRRRWT 393
Query: 236 PRRGKTP--LDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLG-DVSE 292
P K P + PD G+ +S P+E S+KQ C ++Y RKL+ LQ EG LG + E
Sbjct: 394 PAARKDPNRILPDYDGYRFSPPVEKSYKQYCSIKRQEYKRKLIHLLQFEGVYALGENARE 453
Query: 293 SDYVRVEERLKK-LIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQK 351
+Y + ERLKK ++ V KPKAASK+ V+E+KEEL+AQGLPTDG R +LYQRVQK
Sbjct: 454 EEYTAILERLKKENVRKRLSDVRKPKAASKLSVAEMKEELEAQGLPTDGNRRLLYQRVQK 513
Query: 352 ARRINRSRGRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFL-GEGLNGRHD 410
ARRIN ++G PLW+PP EE EEVDEE + ++++I L ++ ++ F+ G GL +
Sbjct: 514 ARRINLAKGAPLWMPPEEETIEEVDEEFETVLAKIDLRNPRQQYRRKCFIEGVGLENLYK 573
Query: 411 KAVEMDESELSDVLDDDVTDVEYVAKDEEADEEEEVEQAEPESQDVDRVKEKLVEAKKPL 470
+ M V+++ +++E A +AEP + V+E E +P+
Sbjct: 574 ENPRM-------VIEESDSEMEEDA------------EAEPREVEGHVVREDEEEIIQPV 614
Query: 471 QMIGVQLLKDSDQTTTTSKRSMKR---------SSRMVEDDDDEDWFPEDPFEAFKEMRK 521
V ++ +TT + + D+ + + P E E+
Sbjct: 615 DGGEVDETTEASKTTDDEDEEEEEVVEVSPAVVGNEPASDNIEGAYKPLTLEEKRAELAA 674
Query: 522 RKVFDVSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDC 581
K FD +M I + WGWTWER++ +PP+ W+++ EVEL+IQ++ KV+ELGG+PT+ DC
Sbjct: 675 MK-FDFREMDEIEEIWGWTWERDLQAQPPEIWTRKREVELSIQLLDKVLELGGSPTLSDC 733
Query: 582 AVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMET 641
A+++R A++ P P + + +++K+H G+ FGS LY++ + CL + E DAA+AI+ DME
Sbjct: 734 AMLVRNAMKLPWPESVVTLIRKSHKCGHKFGSKLYEDAVMSCLSVQENDAAIAILTDMEE 793
Query: 642 TGIAVPDQTLDRVI 655
+G++ P++ L RV+
Sbjct: 794 SGVSTPNELLGRVL 807
>gi|302754366|ref|XP_002960607.1| hypothetical protein SELMODRAFT_164431 [Selaginella moellendorffii]
gi|300171546|gb|EFJ38146.1| hypothetical protein SELMODRAFT_164431 [Selaginella moellendorffii]
Length = 810
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 287/680 (42%), Positives = 426/680 (62%), Gaps = 51/680 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++ E+CK G H A+ I ME+ GR+ATTFH+N LL Q P++A TFE M+Y
Sbjct: 154 LVEENCKTGKHGVAINILRSMESRGRLATTFHYNCLLLAQGNANFPDIAEDTFEEMQYLR 213
Query: 61 DY----MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVEC 116
KPDTE++N +IQA TR ++ +RV +V L+G M E + +++PN +TYAL+VEC
Sbjct: 214 RESIPDTKPDTESFNLMIQAQTRCDNGERVHEVIVLIGHMTELYPQVKPNARTYALIVEC 273
Query: 117 FTKYCAVTEAIRHFRALQN-YEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEA 175
+ K+ + EA+RHFRAL + G VLH +G GDPLSL +R+LC EGRI++L+E L+
Sbjct: 274 YVKFNFMDEAMRHFRALTKLFPGSLHVLHCDGKHGDPLSLLIRSLCLEGRIVQLVEVLDL 333
Query: 176 MAKDNQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWV 235
M ++ + PRAM ++RK RTLVSSWIEP+QEEA++G EID++ARYI+EGGLTG R+RW
Sbjct: 334 MLQEGLKLTPRAMFMNRKGRTLVSSWIEPMQEEADIGCEIDFVARYIAEGGLTGTRRRWT 393
Query: 236 PRRGKTP--LDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLG-DVSE 292
P K P + PD G+ +S P+E S+KQ C ++Y RKL+ LQ EG LG + E
Sbjct: 394 PAARKDPNRILPDYDGYRFSPPVEKSYKQYCSIKRQEYKRKLIHLLQFEGVYALGENARE 453
Query: 293 SDYVRVEERLKK-LIKGPEQHVLKPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQK 351
+Y + ERLKK ++ V KPKAASK+ V+E+KEEL+AQGLPTDG R +LYQRVQK
Sbjct: 454 EEYTAILERLKKENVRKRLSDVRKPKAASKLSVAEMKEELEAQGLPTDGNRRLLYQRVQK 513
Query: 352 ARRINRSRGRPLWVPPVEEEEEEVDEEVDELISRIKLEEGNTEFWKRRFL-GEGLNGRHD 410
ARRIN ++G PLW+PP EE EEVDEE + ++++I L ++ ++ F+ G GL +
Sbjct: 514 ARRINLAKGAPLWMPPEEETIEEVDEEFETVLAKIDLRNPRQQYRRKCFIEGVGLENLYK 573
Query: 411 KAVEMDESELSDVLDDDVTDVEYVAKDEEADEEEEVEQAEPESQDVDRVKEKLVEAKKPL 470
+ M V+++ +++E A+ E + E V V+E E +P+
Sbjct: 574 ENPRM-------VIEESDSEMEEDAEAESREVEGHV------------VREDEEEIIQPV 614
Query: 471 QMIGVQLLKDSDQTTTTSKRSMKR---------------SSRMVEDDDDEDWFPEDPFEA 515
+ D+TT SK + + D+ + + P E
Sbjct: 615 DG------GEVDETTEASKATDDEDEEEEEVVEVSPAVVGNEPASDNIEGAYKPLTLEEK 668
Query: 516 FKEMRKRKVFDVSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGT 575
E+ K FD +M I + WGWTWER++ +PP+ W+++ EVEL+IQ++ KV+ELGG+
Sbjct: 669 RAELAAMK-FDFREMDEIEEIWGWTWERDLQAQPPEIWTRKREVELSIQLLDKVLELGGS 727
Query: 576 PTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAI 635
PT+ DCA+++R A++ P P + + +++K+H G+ FGS LY++ + CL + E DAA+AI
Sbjct: 728 PTLSDCAMLVRNAMKLPWPESVVTLIRKSHKCGHKFGSKLYEDAVMSCLSVQENDAAIAI 787
Query: 636 VADMETTGIAVPDQTLDRVI 655
+ DME +G++ P++ L RV+
Sbjct: 788 LTDMEESGVSTPNELLGRVL 807
>gi|449479780|ref|XP_004155705.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 501
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/218 (88%), Positives = 207/218 (94%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI EDCKAGDHSNALEI+YEMEAAGRMATTFHFN LLS QATCGIPE+AF+TFENMEYGE
Sbjct: 213 MIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQATCGIPEIAFSTFENMEYGE 272
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
DYMKPDTETYN VIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPN++TYALLVECFTKY
Sbjct: 273 DYMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNMRTYALLVECFTKY 332
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
C + EAIRHFRAL+ +EGGT LHNEGNFGDPLSLYLRALCREGR++ELLEALEAMA+DN
Sbjct: 333 CVIREAIRHFRALRTFEGGTTALHNEGNFGDPLSLYLRALCREGRVVELLEALEAMARDN 392
Query: 181 QPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYI 218
Q +PPRAMILSRKYR+LVSSWIEPLQEEAE G+EIDYI
Sbjct: 393 QQIPPRAMILSRKYRSLVSSWIEPLQEEAEHGFEIDYI 430
>gi|242039459|ref|XP_002467124.1| hypothetical protein SORBIDRAFT_01g020020 [Sorghum bicolor]
gi|241920978|gb|EER94122.1| hypothetical protein SORBIDRAFT_01g020020 [Sorghum bicolor]
Length = 196
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 138/192 (71%), Positives = 164/192 (85%), Gaps = 4/192 (2%)
Query: 472 MIGVQLLKDSDQTTTTSKRSMKRSSRMVEDDDDEDWFPEDPFEAFKEMRKRKVFDVSDMY 531
MIGVQLLKD ++T +SK+ RM E DDDEDWFPEDP EAFK MR+ ++FDVSDMY
Sbjct: 1 MIGVQLLKDLEKTPVSSKKL----KRMPEIDDDEDWFPEDPIEAFKVMREERMFDVSDMY 56
Query: 532 TIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRA 591
T ADAWGWTWEREI N+ P+KWSQEWEVELAI+IM KVIELGGTPTIGDCA+I+RAA+RA
Sbjct: 57 TTADAWGWTWEREIKNKMPRKWSQEWEVELAIKIMHKVIELGGTPTIGDCAIILRAAMRA 116
Query: 592 PLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTL 651
PLPSAF+ ILQ THSLGY FGSPLYDE++ LCLDL E+DAA+A+VA+MET G VPD+TL
Sbjct: 117 PLPSAFIPILQTTHSLGYKFGSPLYDEVVLLCLDLEEIDAAIAVVAEMETCGFKVPDETL 176
Query: 652 DRVITSRQTGET 663
D+V+ S+Q+G +
Sbjct: 177 DKVLASKQSGNS 188
>gi|115482380|ref|NP_001064783.1| Os10g0462800 [Oryza sativa Japonica Group]
gi|113639392|dbj|BAF26697.1| Os10g0462800, partial [Oryza sativa Japonica Group]
Length = 216
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/198 (71%), Positives = 169/198 (85%), Gaps = 4/198 (2%)
Query: 467 KKPLQMIGVQLLKDSDQTTTTSKRSMKRSSRMVEDDDDEDWFPEDPFEAFKEMRKRKVFD 526
K+ LQMIGVQLLKD ++T+ +SK+S R+ E DDDEDWFPEDP EAFK MR+ ++FD
Sbjct: 14 KQHLQMIGVQLLKDLEKTSVSSKKS----KRVPEIDDDEDWFPEDPIEAFKVMRETRLFD 69
Query: 527 VSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIR 586
VSDMYT ADAWGWTWEREI N+ P+KWSQEWEVELAI+IM KVI+LGGTPTIGDCA+I+R
Sbjct: 70 VSDMYTTADAWGWTWEREIKNKMPRKWSQEWEVELAIKIMHKVIDLGGTPTIGDCAIILR 129
Query: 587 AAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAV 646
AA+R PLPSAF+ ILQ THSLGY FGSPLYDE I LCLDL E+DAA+A+VA+MET GI V
Sbjct: 130 AAMRVPLPSAFMTILQTTHSLGYKFGSPLYDEAILLCLDLEEIDAAIAVVAEMETNGIKV 189
Query: 647 PDQTLDRVITSRQTGETS 664
PD+TLD+V+ ++Q+G S
Sbjct: 190 PDETLDKVLAAKQSGGNS 207
>gi|255634266|gb|ACU17497.1| unknown [Glycine max]
Length = 213
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/182 (79%), Positives = 160/182 (87%), Gaps = 2/182 (1%)
Query: 256 METSFKQRCLEDGKKYHRKLLRTLQNEGPAVLGD-VSESDYVRVEERLKKLIKGPEQHVL 314
METSFKQRCLE+ K +++KLL+TLQNEG A LGD VSESDY+RV+ERLKKLIKGPEQ+VL
Sbjct: 1 METSFKQRCLEELKLHNKKLLKTLQNEGLAALGDGVSESDYIRVQERLKKLIKGPEQNVL 60
Query: 315 KPKAASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEE 374
KPKAASKM+VSELKEELDAQGLP DG RNVLYQRVQKARRINRSRGRPLWVPPVEEEEEE
Sbjct: 61 KPKAASKMLVSELKEELDAQGLPIDGNRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEE 120
Query: 375 VDEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESELSDVLDDDVTDVEYV 434
VDEE+D LIS IKLEEGNTEFWKRRFLGEGLNG + + ESE+ +VL DDV +E
Sbjct: 121 VDEELDALISHIKLEEGNTEFWKRRFLGEGLNGDQEMPTDAAESEVPEVL-DDVDAIEDA 179
Query: 435 AK 436
AK
Sbjct: 180 AK 181
>gi|297788459|ref|XP_002862330.1| hypothetical protein ARALYDRAFT_920889 [Arabidopsis lyrata subsp.
lyrata]
gi|297307731|gb|EFH38588.1| hypothetical protein ARALYDRAFT_920889 [Arabidopsis lyrata subsp.
lyrata]
Length = 137
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/116 (82%), Positives = 108/116 (93%)
Query: 547 NRPPQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHS 606
NR P+KWSQEWEVELAI +M KVIELGG PTIGDCAVI+RAA+RAP+PSAFLKILQ THS
Sbjct: 7 NRTPRKWSQEWEVELAIVLMTKVIELGGIPTIGDCAVILRAALRAPMPSAFLKILQTTHS 66
Query: 607 LGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDRVITSRQTGE 662
LGY FGSPLYDEII+LCLD+GELDAA+AIVADMETTGI VPDQTLD+VI++RQ+ E
Sbjct: 67 LGYSFGSPLYDEIITLCLDIGELDAAIAIVADMETTGITVPDQTLDKVISARQSNE 122
>gi|242039461|ref|XP_002467125.1| hypothetical protein SORBIDRAFT_01g020030 [Sorghum bicolor]
gi|241920979|gb|EER94123.1| hypothetical protein SORBIDRAFT_01g020030 [Sorghum bicolor]
Length = 327
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/112 (83%), Positives = 102/112 (91%), Gaps = 1/112 (0%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEY-G 59
+I EDCKAGDHSNAL +AY+MEA+GRMATTFHFN LLS QATCGIPEVAFATFENMEY G
Sbjct: 216 LIEEDCKAGDHSNALTVAYQMEASGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGG 275
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYA 111
EDYMKPDTE+YN VIQA+TRA SYDR DVAELLGMMVEDHKR+QPN +TYA
Sbjct: 276 EDYMKPDTESYNWVIQAFTRATSYDRAADVAELLGMMVEDHKRIQPNARTYA 327
>gi|414871209|tpg|DAA49766.1| TPA: hypothetical protein ZEAMMB73_347666 [Zea mays]
Length = 327
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/112 (83%), Positives = 101/112 (90%), Gaps = 1/112 (0%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEY-G 59
+I EDCKAGDHSNAL +AY+MEA GRMATTFHFN LLS QATCGIPEVAFATFENMEY G
Sbjct: 216 LIEEDCKAGDHSNALTVAYQMEAYGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGG 275
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYA 111
EDYMKPDTE+YN VIQA+TRA SYDR DVAELLGMMVEDHKR+QPN +TYA
Sbjct: 276 EDYMKPDTESYNWVIQAFTRATSYDRAADVAELLGMMVEDHKRIQPNARTYA 327
>gi|414871208|tpg|DAA49765.1| TPA: hypothetical protein ZEAMMB73_987620, partial [Zea mays]
Length = 94
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/94 (80%), Positives = 86/94 (91%)
Query: 519 MRKRKVFDVSDMYTIADAWGWTWEREITNRPPQKWSQEWEVELAIQIMLKVIELGGTPTI 578
MR+ ++FDVSDMYT ADAWGWTWEREI N+ P+KWSQEWEVELAI+IM KVIELGGTPTI
Sbjct: 1 MREERMFDVSDMYTTADAWGWTWEREIKNKMPRKWSQEWEVELAIKIMHKVIELGGTPTI 60
Query: 579 GDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFG 612
GDCA+I+RAA+RAPLPSAF+ ILQ THSLGY FG
Sbjct: 61 GDCAIILRAAMRAPLPSAFIPILQTTHSLGYKFG 94
>gi|449527217|ref|XP_004170609.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 104
Score = 137 bits (344), Expect = 3e-29, Method: Composition-based stats.
Identities = 64/80 (80%), Positives = 75/80 (93%)
Query: 583 VIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVADMETT 642
+I+RAAI+APLPSAFLKILQ TH LGYVFGSPLYDE+I+LCLDLGELDAA+AIVAD+ETT
Sbjct: 1 MILRAAIKAPLPSAFLKILQTTHGLGYVFGSPLYDEVITLCLDLGELDAAIAIVADLETT 60
Query: 643 GIAVPDQTLDRVITSRQTGE 662
GI V D+TLDRVI++RQT +
Sbjct: 61 GILVHDETLDRVISARQTND 80
>gi|357438353|ref|XP_003589452.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478500|gb|AES59703.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 271
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/60 (88%), Positives = 56/60 (93%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I EDCKAGDHSNALEI+YEMEAAGRMATTFHFN LLS QATCGIPE+AF TFENMEYGE
Sbjct: 200 LIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQATCGIPEIAFTTFENMEYGE 259
>gi|147857882|emb|CAN82532.1| hypothetical protein VITISV_023135 [Vitis vinifera]
Length = 298
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQAT---CG-IPEVAFATF 53
+I EDCK GDHSNAL IAYEMEAAGRMATT+HFN LLS Q T CG +P F F
Sbjct: 210 LIEEDCKVGDHSNALTIAYEMEAAGRMATTYHFNCLLSVQYTNDLCGKLPTKPFIDF 266
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I +CKAG ALE ++ + FN L+ G P+ A FENME
Sbjct: 68 LIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENME--S 125
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KP+ TYN VI ++ + ++ + ELL M+ + P++ TY L+ F +
Sbjct: 126 SRVKPEIVTYNTVISGLCKSGNLEKAR---ELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+ EA ++ VL ++ + +C++G + E LE L+ M K
Sbjct: 183 SRIREACAFREKMKAAGINPDVL--------TCNILVSGICKDGDVEEALEILDGM-KLA 233
Query: 181 QPVP 184
PVP
Sbjct: 234 GPVP 237
>gi|357166198|ref|XP_003580632.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Brachypodium distachyon]
Length = 644
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M AG + +N LL A G+ + A F+ M ED ++PD +YN +I+ Y RA
Sbjct: 199 MRLAGVEPSRVTYNCLLDGLANAGLLDTAINVFDAMST-EDRVRPDVVSYNILIKGYCRA 257
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGT 140
R QD L M E L P+ TY L++ ++ IR F+ ++ G
Sbjct: 258 ---GRAQDAMARLAHMRE-QAELSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEEMGMGK 313
Query: 141 KVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP 182
+ + L + ALC+EG+ E L E M K P
Sbjct: 314 DIPQHA------YVLVIGALCKEGKPFEGLAVFERMLKSGYP 349
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 90/235 (38%), Gaps = 40/235 (17%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK GD A + +M+ AG +N L+ G+ + FE M+ +
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD TYN +I + + ++R+ E L M + L+PNV TY+ ++ F K
Sbjct: 122 --CDPDVITYNALINCFCK---FERMPKAFEFLHEMKANG--LKPNVVTYSTFIDAFCKE 174
Query: 121 CAVTEAIRHFRALQ---------NYEGGTKVLHNEGNFGDPLSL---------------- 155
+ EAI+ F ++ Y GN + L L
Sbjct: 175 GMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTY 234
Query: 156 --YLRALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIEPLQEE 208
L LC EGR+ E E AM N V P Y LV +I+ + E
Sbjct: 235 TALLDGLCEEGRMKEAEEVFRAML--NAGVAPN----QETYTALVHGFIKAKEME 283
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G S A E+ + AG + T +N L++ G E AF+TF M+ ++KP
Sbjct: 166 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK--SRHIKP 223
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I +AE R+ + +LL M ++D+ + P V+T+ L++ + + + +
Sbjct: 224 DHITYNALINGLCKAE---RITNAQDLL-MEMQDNG-VNPTVETFNTLIDAYGRTGQLEK 278
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
+Q E G K N ++G + A C+ G+I E + L+ M ++ V P
Sbjct: 279 CFIVLSEMQ--ENGLK--PNVVSYGS----IVNAFCKNGKIPEAVAILDDMF--HKDVLP 328
Query: 186 RAMILSRKYRTLVSSWIE 203
A + Y ++ +++E
Sbjct: 329 NAQV----YNAIIDAYVE 342
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKA +NA ++ EM+ G T FN L+ G E F M+ E
Sbjct: 231 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ--E 288
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ +KP+ +Y ++ A+ + ++ + +L M HK + PN + Y +++ + ++
Sbjct: 289 NGLKPNVVSYGSIVNAFCKN---GKIPEAVAILDDMF--HKDVLPNAQVYNAIIDAYVEH 343
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+A +++ ++ +L ++ LC + +I E E + +++ N
Sbjct: 344 GPNDQAFILVEKMKSNGISPSIV--------TYNLLIKGLCNQSQISEAEEIINSLS--N 393
Query: 181 QPVPPRAMILSRKYRTLVSS 200
+ P A+ Y TL+S+
Sbjct: 394 HRLIPDAV----SYNTLISA 409
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YG 59
+IA +AG +A+E+ EM + +N ++ G E F + M +G
Sbjct: 21 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 80
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP+ TYN ++ RA R+ + + LL M +++ P+ TY++L + ++
Sbjct: 81 ---LKPNAITYNVLLSGLCRA---GRMGETSALLDEMAS--QKMVPDGFTYSILFDGLSR 132
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGD-PLSLYLRALCREGRIIELLEALEAMAK 178
+ F K L N GD S+ L LC++G++ E L+++
Sbjct: 133 NGDSKAMLSLF---------GKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 183
Query: 179 DNQPVPPRAMILSRKYRTLVSSWIE 203
VP R + Y TL++ + +
Sbjct: 184 AGL-VPTRVI-----YNTLINGYCQ 202
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G S A E+ + AG + T +N L++ G E AF+TF M+ ++KP
Sbjct: 214 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK--SRHIKP 271
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I +AE R+ + +LL M ++D+ + P V+T+ L++ + + + +
Sbjct: 272 DHITYNALINGLCKAE---RITNAQDLL-MEMQDNG-VNPTVETFNTLIDAYGRTGQLEK 326
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
+Q E G K N ++G + A C+ G+I E + L+ M ++ V P
Sbjct: 327 CFIVLSEMQ--ENGLK--PNVVSYGS----IVNAFCKNGKIPEAVAILDDMF--HKDVLP 376
Query: 186 RAMILSRKYRTLVSSWIE 203
A + Y ++ +++E
Sbjct: 377 NAQV----YNAIIDAYVE 390
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKA +NA ++ EM+ G T FN L+ G E F M+ E
Sbjct: 279 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ--E 336
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ +KP+ +Y ++ A+ + ++ + +L M HK + PN + Y +++ + ++
Sbjct: 337 NGLKPNVVSYGSIVNAFCKN---GKIPEAVAILDDMF--HKDVLPNAQVYNAIIDAYVEH 391
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+A +++ ++ +L ++ LC + +I E E + +++ N
Sbjct: 392 GPNDQAFILVEKMKSNGISPSIV--------TYNLLIKGLCNQSQISEAEEIINSLS--N 441
Query: 181 QPVPPRAMILSRKYRTLVSS 200
+ P A+ Y TL+S+
Sbjct: 442 HRLIPDAV----SYNTLISA 457
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YG 59
+IA +AG +A+E+ EM + +N ++ G E F + M +G
Sbjct: 69 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 128
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP+ TYN ++ RA R+ + + LL M +++ P+ TY++L + ++
Sbjct: 129 ---LKPNAITYNVLLSGLCRA---GRMGETSALLDEMAS--QKMVPDGFTYSILFDGLSR 180
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGD-PLSLYLRALCREGRIIELLEALEAMAK 178
+ F K L N GD S+ L LC++G++ E L+++
Sbjct: 181 NGDSKAMLSLF---------GKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 231
Query: 179 DNQPVPPRAMILSRKYRTLVSSWIE 203
VP R + Y TL++ + +
Sbjct: 232 AGL-VPTRVI-----YNTLINGYCQ 250
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G S A E+ + AG + T +N L++ G E AF+TF M+ ++KP
Sbjct: 351 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK--SRHIKP 408
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I +AE QD L M ++D+ + P V+T+ L++ + + + +
Sbjct: 409 DHITYNALINGLCKAERITNAQD----LLMEMQDNG-VNPTVETFNTLIDAYGRTGQLEK 463
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
+Q E G K N ++G + A C+ G+I E + L+ M ++ V P
Sbjct: 464 CFIVLSEMQ--ENGLKP--NVVSYGS----IVNAFCKNGKIPEAVAILDDMF--HKDVLP 513
Query: 186 RAMILSRKYRTLVSSWIE 203
A + Y ++ +++E
Sbjct: 514 NAQV----YNAIIDAYVE 527
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKA +NA ++ EM+ G T FN L+ G E F M+ E
Sbjct: 416 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ--E 473
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ +KP+ +Y ++ A+ + ++ + +L M HK + PN + Y +++ + ++
Sbjct: 474 NGLKPNVVSYGSIVNAFCKN---GKIPEAVAILDDMF--HKDVLPNAQVYNAIIDAYVEH 528
Query: 121 CAVTEAIRHFRALQ-NYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+A ++ N + V +N L ++ LC + +I E E + +++
Sbjct: 529 GPNDQAFILVEKMKSNGISPSIVTYN---------LLIKGLCNQSQISEAEEIINSLS-- 577
Query: 180 NQPVPPRAMILSRKYRTLVSS 200
N + P A+ Y TL+S+
Sbjct: 578 NHRLIPDAV----SYNTLISA 594
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YG 59
+IA +AG +A+E+ EM + +N ++ G E F + M +G
Sbjct: 206 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 265
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP+ TYN ++ RA R+ + + LL M +++ P+ TY++L + ++
Sbjct: 266 ---LKPNAITYNVLLSGLCRA---GRMGETSALLDEMAS--QKMVPDGFTYSILFDGLSR 317
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGD-PLSLYLRALCREGRIIELLEALEAMAK 178
+ F K L N GD S+ L LC++G++ E L+++
Sbjct: 318 NGDSKAMLSLF---------GKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 368
Query: 179 DNQPVPPRAMILSRKYRTLVSSWIE 203
VP R + Y TL++ + +
Sbjct: 369 AGL-VPTRVI-----YNTLINGYCQ 387
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI +G A++I +M+ G TT FN L+ G P A E M +
Sbjct: 119 MINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLE-MMIQD 177
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KP+ TYN +IQA+ + + +++ ++ MV + +QP++ TY L F +
Sbjct: 178 GNVKPNERTYNILIQAWC---TKNELEEAWNVMHKMV--NSGMQPDIVTYNTLARAFAQN 232
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
A R +Q Y KV NE G + +R C+EG + E L L M
Sbjct: 233 GETDNAERLILKMQQYN--NKVKPNERTCG----IIIRGYCKEGNMTEALRFLYKM 282
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 15/118 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHL----LSCQATCGIPEVAFATFENMEYGED 61
CK G+ + AL Y+M+ G FN L L T G+ E A E E+G
Sbjct: 267 CKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEE-ALTLME--EFG-- 321
Query: 62 YMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KPD TY+ ++ A++ + D + E+ MV+ ++P+++ Y++L + + +
Sbjct: 322 -IKPDVVTYSTIMNAWSSSGLMDNCE---EIFDDMVK--AEIEPDIQAYSILAKGYVR 373
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G S A E+ + AG + T +N L++ G E AF+TF M+ ++KP
Sbjct: 347 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK--SRHIKP 404
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I +AE QD L M ++D+ + P V+T+ L++ + + + +
Sbjct: 405 DHITYNALINGLCKAERITNAQD----LLMEMQDNG-VNPTVETFNTLIDAYGRTGQLEK 459
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
+Q E G K N ++G + A C+ G+I E + L+ M ++ V P
Sbjct: 460 CFIVLSEMQ--ENGLKP--NVVSYGS----IVNAFCKNGKIPEAVAILDDMF--HKDVLP 509
Query: 186 RAMILSRKYRTLVSSWIE 203
A + Y ++ +++E
Sbjct: 510 NAQV----YNAIIDAYVE 523
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKA +NA ++ EM+ G T FN L+ G E F M+ E
Sbjct: 412 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ--E 469
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ +KP+ +Y ++ A+ + ++ + +L M HK + PN + Y +++ + ++
Sbjct: 470 NGLKPNVVSYGSIVNAFCKN---GKIPEAVAILDDMF--HKDVLPNAQVYNAIIDAYVEH 524
Query: 121 CAVTEAIRHFRALQ-NYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+A ++ N + V +N L ++ LC + +I E E + +++
Sbjct: 525 GPNDQAFILVEKMKSNGISPSIVTYN---------LLIKGLCNQSQISEAEEIINSLS-- 573
Query: 180 NQPVPPRAMILSRKYRTLVSS 200
N + P A+ Y TL+S+
Sbjct: 574 NHRLIPDAV----SYNTLISA 590
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YG 59
+IA +AG +A+E+ EM + +N ++ G E F+ + M +G
Sbjct: 202 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHG 261
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP+ TYN ++ RA R+ + + LL M +++ P+ TY++L + ++
Sbjct: 262 ---LKPNAITYNVLLSGLCRA---GRMGETSALLDEMAS--QKMVPDGFTYSILFDGLSR 313
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGD-PLSLYLRALCREGRIIELLEALEAMAK 178
+ F K L N GD S+ L LC++G++ E L+++
Sbjct: 314 NGDSKAMLSLF---------GKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 364
Query: 179 DNQPVPPRAMILSRKYRTLVSSWIE 203
VP R + Y TL++ + +
Sbjct: 365 AGL-VPTRVI-----YNTLINGYCQ 383
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 114/303 (37%), Gaps = 56/303 (18%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK GD A + +M+ AG +N L+ G+ + FE M+ +
Sbjct: 261 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 320
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD TYN +I + + ++R+ E L M + L+PNV TY+ ++ F K
Sbjct: 321 --CDPDVITYNALINCFCK---FERMPKAFEFLHEMKANG--LKPNVVTYSTFIDAFCKE 373
Query: 121 CAVTEAIRHFRALQ---------NYEGGTKVLHNEGNFGDPLSL---------------- 155
+ EAI+ F ++ Y GN + L L
Sbjct: 374 GMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTY 433
Query: 156 --YLRALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIEP--------- 204
L LC EGR+ E E AM N V P Y LV +I+
Sbjct: 434 TALLDGLCEEGRMKEAEEVFRAML--NAGVAPN----QETYTALVHGFIKAKEMEYAKDI 487
Query: 205 LQEEAELGYEIDYIARYISEGGLTGER-----KRWVPRRGKTPLDPDAVGFIYSNPMETS 259
L+E E + D + GL E K + ++ ++ +AV IY+ M+
Sbjct: 488 LKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAV--IYTTLMDAY 545
Query: 260 FKQ 262
FK
Sbjct: 546 FKS 548
>gi|242078465|ref|XP_002444001.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
gi|241940351|gb|EES13496.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
Length = 824
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ + A+++ EM A G + H+ L++ G E A+ FE M +KP
Sbjct: 415 CKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKAN--IKP 472
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN + Y+R + +V D LL MV+ + L+PN TY + + CF + ++E
Sbjct: 473 DVVTYNILASGYSRNGAVIKVYD---LLEHMVD--QGLEPNSLTYGVAIACFCREGNLSE 527
Query: 126 AIRHFRALQ 134
A F L+
Sbjct: 528 AEVLFNILE 536
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 14/178 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I +CKAG + ALE ++ + FN L+ G P+ A FENME
Sbjct: 68 LIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENME--S 125
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVEC-FTK 119
+ PD TYN VI ++ + ++ + ELL M+ + P++ TY L+ K
Sbjct: 126 SRVNPDIFTYNTVISGLCKSGNLEKAR---ELLEEMIRRGGKSAPDIVTYNTLINAGICK 182
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
V EA+ ++ V+ + ALC GR++E E L+ M+
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNS--------IIHALCVAGRVVEAAEILKTMS 232
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 87/209 (41%), Gaps = 23/209 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG + ALE+ Y M+ AG M T +N L+SC G + A E+M + PD
Sbjct: 347 KAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN--RKGIMPD 404
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN VI + Y++ GMM ++ P+V TY L+ K EA
Sbjct: 405 CRTYNIVIDVLSSCGRYEKAY---SFFGMM--KRRKHSPDVVTYNTLLNGLKKLRRTDEA 459
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPR 186
F +Q K + + FG + L + GR+ + LE + K P
Sbjct: 460 CDLFDEMQ----ANKCMPDLTTFGTLID----TLAKAGRMEDALEQSARLVKMGH--APN 509
Query: 187 AMILSRKYRTLVSSWIEPLQEEAELGYEI 215
+ I Y L+S + Q + GYE+
Sbjct: 510 SYI----YNALISGFCRSGQVDK--GYEL 532
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 30/227 (13%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD AL + +MEAA A FN ++ EVA F ME ++P
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME--TKGIRP 291
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TYN +I +Y R D + LL M+E K++ PNV T+ L++ F K + E
Sbjct: 292 NVVTYNSLINCLC---NYGRWSDASRLLSNMLE--KKINPNVVTFNALIDAFFKEGKLVE 346
Query: 126 AIR-HFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM-AKDNQPV 183
A + H +Q + +N L + C R+ E + + M +KD P
Sbjct: 347 AEKLHEEMIQRSIDPDTITYN---------LLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 184 PPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGE 230
+ Y TL++ + + + E G E + R +S+ GL G
Sbjct: 398 I-------QTYNTLINGFCKC--KRVEDGVE---LFREMSQRGLVGN 432
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 23/129 (17%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK- 64
C+ GD + A +MEA G +N L+ F +NME E +K
Sbjct: 403 CQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVK----------KFCEMKNMEEAEKCIKK 452
Query: 65 -------PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
P+ ETYN +I Y R+ +DR + E + + K L+PNV +Y L+ C
Sbjct: 453 MVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM-----EKKGLKPNVISYGCLINCL 507
Query: 118 TKYCAVTEA 126
K + EA
Sbjct: 508 CKDANILEA 516
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI K G +AL + EM+ G +N LLS A G E A + ME
Sbjct: 372 MIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAG 431
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++ D TYN ++ Y + YD V+ V E + R+ PN+ TY+ L++ ++K
Sbjct: 432 --IRKDVVTYNALLAGYGKQYRYDEVRRVFEEM-----KRGRVSPNLLTYSTLIDVYSKG 484
Query: 121 CAVTEAIRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
EA+ FR + + G K VL+ S + ALC+ G + + L+ M
Sbjct: 485 GLYKEAMEVFREFK--QAGLKADVVLY---------SALIDALCKNGLVESSVTLLDEMT 533
Query: 178 KD 179
K+
Sbjct: 534 KE 535
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 21/176 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG +AL + EM+ G +N LLS A G E A + M G +K D
Sbjct: 375 KAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM--GSSGVKKD 432
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN ++ Y + ++ +V + M +D R+ PN+ TY+ L++ ++K EA
Sbjct: 433 VVTYNALLDGYGKQGKFN---EVTRVFKEMKKD--RVFPNLLTYSTLIDVYSKGSLYEEA 487
Query: 127 IRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ FR + + G K VL++E + ALC+ G + + L+ M K+
Sbjct: 488 MEVFREFK--QAGLKADVVLYSE---------LINALCKNGLVDSAVLLLDEMTKE 532
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 21/176 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG +AL + EM+ G +N LLS A G E A + M G +K D
Sbjct: 375 KAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM--GSSGVKKD 432
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN ++ Y + ++ +V + M +D R+ PN+ TY+ L++ ++K EA
Sbjct: 433 VVTYNALLDGYGKQGKFN---EVTRVFKEMKKD--RVFPNLLTYSTLIDVYSKGSLYEEA 487
Query: 127 IRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ FR + + G K VL++E + ALC+ G + + L+ M K+
Sbjct: 488 MEVFREFK--QAGLKADVVLYSE---------LINALCKNGLVDSAVLLLDEMTKE 532
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 24/217 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C G A+E+ EM G +N +++ G +A F+ ME +
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKME--Q 221
Query: 61 DYMKPDTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ KPD TYN +I + + DR V D E L M++ + + PNV TY +V F
Sbjct: 222 NGCKPDVVTYNTIIDSLCK----DRLVNDAMEFLSEMLD--RGIPPNVFTYNCMVHGFCI 275
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ EA R F+ + G V+ + L++ + LC+EG + E E M +
Sbjct: 276 LGQLNEATRLFKEMV----GRDVMPDT----VTLTILVDGLCKEGMVSEARLVFETMTE- 326
Query: 180 NQPVPPRAMILSRKYRTLVSSW-IEPLQEEAELGYEI 215
+ V P Y L+ + ++ L EA+ +EI
Sbjct: 327 -KGVEPNI----STYNALMDGYCLQRLMNEAKKVFEI 358
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P +YN +I + ++ R+ + LL M HK L P+ TY+ L++ ++
Sbjct: 366 PGVHSYNILINGFCKSR---RMDEAKSLLAEMY--HKALNPDTVTYSTLMQGLCQFGRPK 420
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
EA+ F+ + +Y +L N + S+ L C+ G + E L+ L++M
Sbjct: 421 EALNIFKEMCSY----GLLPNLVTY----SILLDGFCKHGHLDEALKLLKSM 464
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M AG T F +N ++ C G E A FE M++ + PDT TYN +I Y +
Sbjct: 123 DMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRG--LIPDTVTYNSMIDGYGK 180
Query: 80 AESY-DRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
D V E+ M E P+V TY L+ CF K+ + + + FR ++
Sbjct: 181 VGRLDDTVYFFEEMKSMSCE------PDVITYNTLINCFCKFGKLPKGLEFFREMK 230
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK GD A + EM+ G + T +N ++ G + FE M+
Sbjct: 139 MIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS 198
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD TYN +I + + + ++ E M + L+PNV +Y+ LV+ F K
Sbjct: 199 --CEPDVITYNTLINCFCK---FGKLPKGLEFFREMKQ--SGLKPNVVSYSTLVDAFCKE 251
Query: 121 CAVTEAIRHF 130
+ +A++ +
Sbjct: 252 DMMQQALKFY 261
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G S A E+ + +G + TT +N L++ G E AF+ F+ M+ ++P
Sbjct: 339 CKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMK--SRLIRP 396
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR-LQPNVKTYALLVECFTKYCAVT 124
D TYN +I + E D +++E K + P+V+T+ L++ + + +
Sbjct: 397 DHITYNALINGLGKVERITEAHD------LVIEMEKNGVNPSVETFNTLIDAYGRAGQLE 450
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM-AKDNQPV 183
+ +Q E G K N ++G + A C+ G+I+E + L+ M KD V
Sbjct: 451 KCFIILSDMQ--EKGLK--PNVVSYGS----IVNAFCKNGKILEAVAILDDMFIKD---V 499
Query: 184 PPRAMILSRKYRTLVSSWIE 203
P A + Y ++ ++IE
Sbjct: 500 LPGAQV----YNAIIDAYIE 515
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 82/205 (40%), Gaps = 34/205 (16%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK GD A + ++M+ G +N L+ G+ + +F FE M+ +
Sbjct: 258 MIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMK--D 315
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD TYN +I + + Y+++ L M + L+PNV TY+ L++ K
Sbjct: 316 VGCEPDVITYNALINCFCK---YEQMPKAFHFLHEM--KNSGLKPNVVTYSTLIDALCKE 370
Query: 121 CAVTEAIRHFRALQ---------NYEGGTKVLHNEGNFGDPLSL---------------- 155
+ +AI+ ++ Y G D L L
Sbjct: 371 HMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTY 430
Query: 156 --YLRALCREGRIIELLEALEAMAK 178
L LC+EGR++E + AM K
Sbjct: 431 TTLLDGLCKEGRMMEAEDLFRAMIK 455
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
GD SN + +M AG + F +N ++ G A + F M+ + + PD
Sbjct: 233 GDLSN--KFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMK--QMGLTPDIV 288
Query: 69 TYNCVIQAYTRA----ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
TYN +I Y + ES+ +++ ++ +P+V TY L+ CF KY +
Sbjct: 289 TYNSLIDGYGKLGLLDESFCLFEEMKDV---------GCEPDVITYNALINCFCKYEQMP 339
Query: 125 EAIRHFRALQN 135
+A ++N
Sbjct: 340 KAFHFLHEMKN 350
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI ++G+ A++I +M+ G TT FN L+ G+PE + M E
Sbjct: 147 MINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQ-E 205
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ +KP+ T+N +I+A+ + R+ + ++ M LQP+V TY L + +
Sbjct: 206 ENVKPNDRTFNSLIRAWCNKK---RITEAWNVVYKMAASG--LQPDVVTYNTLARAYAQN 260
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+ A +QN +V+ NE G + + C+EG++ + L L M N
Sbjct: 261 GETSRAEGMILEMQN----NRVMPNERTCG----IIINGYCKEGKMKDALRFLYRM--RN 310
Query: 181 QPVPPRAMILSRKYRTLVSSWIE 203
V P +I + +L+ +++
Sbjct: 311 YGVHPNLVI----FNSLIKGFLD 329
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 21/176 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG AL + EM+ A +N LLS A G E A + ME +K D
Sbjct: 259 KAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEME--SSGIKKD 316
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN ++ Y + Y+ V+ V E + +R+ PN+ TY+ L++ ++K EA
Sbjct: 317 AVTYNALLGGYGKQGKYEEVKRVFEEM-----KAERIFPNLLTYSTLIDVYSKGGLYQEA 371
Query: 127 IRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ FR + + G K VL+ S + ALC+ G + + L+ M K+
Sbjct: 372 MEVFREFK--KAGLKADVVLY---------SALIDALCKNGLVESAVSFLDEMTKE 416
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 20/195 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEV--AFATFENMEY 58
+I CKAGD A + +M+ G +N L+ C + E+ A+ E M+
Sbjct: 263 VIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLI--HGHCRLQEIDRAYELLEEMK- 319
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
D++ PD TY+ +I RA+ R+ + +LLG + + PNV +Y L++ F+
Sbjct: 320 SNDFV-PDIFTYDILIAGLCRAK---RLSEARDLLGTL-RNEDDCTPNVVSYNTLIDGFS 374
Query: 119 KYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM-A 177
K V +A + F + V+ S +R LC GR E LE M
Sbjct: 375 KAARVNDAYQLFLEMVTAGQHPDVV--------TYSTLIRGLCNAGRASEAHSYLEEMVG 426
Query: 178 KDNQP-VPPRAMILS 191
K P VP + ++S
Sbjct: 427 KKILPKVPVYSSVIS 441
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 20/180 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA CK G A+E+ M + G + ++N +L+C + A + FE + GE
Sbjct: 304 LIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKL--GE 361
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P+ +YN V A + R LGM++E + P+V Y L+ C +
Sbjct: 362 VGCSPNASSYNTVFSALGSSGHKVRA------LGMILEMLDXVDPDVIAYNSLISCLCRD 415
Query: 121 CAVTEAIRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
V EAI ++ K V +N + L LCR GR+ + E L AM
Sbjct: 416 GMVDEAIELLVDMEMESSECKPSVVSYN---------IVLLGLCRVGRVSDATEVLAAMV 466
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 33 FNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAEL 92
+N L+SC G+ + A +ME KP +YN V+ R RV D E+
Sbjct: 405 YNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRV---GRVSDATEV 461
Query: 93 LGMMVEDHKRLQPNVKTYALLVE 115
L MV+ K PN TY L+E
Sbjct: 462 LAAMVD--KGCLPNETTYTFLIE 482
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M AG T F +N ++ C G E A FE M++ + PDT TYN +I + +
Sbjct: 85 DMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG--LIPDTVTYNSMIDGFGK 142
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGG 139
D E + M +P+V TY L+ CF K+ + + + FR ++
Sbjct: 143 VGRLDDTVCFFEEMKDMC-----CEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLK 197
Query: 140 TKVLHNEGNFGDPLSLYLRALCREGRI 166
V+ S + A C+EG +
Sbjct: 198 PNVV--------SYSTLVDAFCKEGMM 216
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK GD A + EM+ G + T +N ++ G + FE M+ +
Sbjct: 101 MIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK--D 158
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD TYN +I + + + ++ E M + L+PNV +Y+ LV+ F K
Sbjct: 159 MCCEPDVITYNALINCFCK---FGKLPKGLEFFREMKRN--GLKPNVVSYSTLVDAFCKE 213
Query: 121 CAVTEAIRHF 130
+ +AI+ +
Sbjct: 214 GMMQQAIKFY 223
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEV--AFATFENMEYGEDYM 63
CK GD AL + +ME A +N ++ C + AFA F ME +
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYNTII--DGLCKYKHIDDAFALFNKME--TKGI 286
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
+PD TYN +I +Y R D + LL M+E +++ PNV T++ L++ F K +
Sbjct: 287 RPDVFTYNSLISCLC---NYGRWSDASRLLSNMIE--RKINPNVVTFSALIDAFVKEGKL 341
Query: 124 TEA 126
EA
Sbjct: 342 VEA 344
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 86/209 (41%), Gaps = 23/209 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG + ALE+ M+ AG M T +N L+SC G + A E+M + PD
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN--RKGIMPD 186
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN VI + Y++ GMM ++ P+V TY L+ K EA
Sbjct: 187 CRTYNIVIDVLSSCGRYEKAY---SFFGMM--KRRKHSPDVVTYNTLLNGLKKLRRTDEA 241
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPR 186
F +Q K + + FG + L + GR+ + LE + K VP
Sbjct: 242 CDLFDEMQ----ANKCMPDLTTFGTLID----TLAKAGRMEDALEQSARLVKMGH-VPN- 291
Query: 187 AMILSRKYRTLVSSWIEPLQEEAELGYEI 215
S Y L+S + Q + GYE+
Sbjct: 292 ----SYIYNALISGFCRSGQVDK--GYEL 314
>gi|440793601|gb|ELR14780.1| PPR repeat/pentatricopeptide repeat domain containing protein,
partial [Acanthamoeba castellanii str. Neff]
Length = 610
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 18/196 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL++ M G + F L+S G EV A + E M P +YN +
Sbjct: 102 ALDLVTRMTQQGYVPDVFVLTALVSALGRAG--EVGKAQYFFNEIQRLGMTPTLHSYNSM 159
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
I A+ RA D+V+D+ E++ HK ++P+V+TY ++ K V EA + F +
Sbjct: 160 IMAFARAGRIDKVRDMLEVM-----KHKGIEPDVRTYTEIINNSCKAGRVAEAYQTFIEM 214
Query: 134 Q------NYEGGTKVLHNEGNFGDPLSLY-----LRALCREGRIIELLEALEAMAKDNQP 182
Q + + + ++ + GD L + AL E +I L +A++ Q
Sbjct: 215 QDVGVQPDLKVYSALIAGFSHVGDHLKAQQLKEEMEALGLEASMITYSGMLSGLARNRQL 274
Query: 183 VPPRAMILSRKYRTLV 198
+I + K R +V
Sbjct: 275 TEMERVIEAMKKRNMV 290
>gi|125606474|gb|EAZ45510.1| hypothetical protein OsJ_30168 [Oryza sativa Japonica Group]
Length = 651
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M AG + +N LL G+ + A F+ M ED ++PD +YN +I+ Y RA
Sbjct: 258 MRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMST-EDQVRPDVVSYNILIKGYCRA 316
Query: 81 -ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGG 139
++D + ++E+ ++ +L P+ TY L++C I F+ ++ G
Sbjct: 317 GRAHDAMARLSEM-----QEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMG 371
Query: 140 TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
+ + L + ALC++G+ E + E M K
Sbjct: 372 NDIPQHA------YVLVIGALCKDGKPFEGMAVFERMLK 404
>gi|356526577|ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 878
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++A KA +AL I EM+ +N L+ A G E A F+ ME
Sbjct: 373 LMAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCG 432
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+K D TYN +I+ Y R Y VQ + + + +R+ PN TY+ L++ +TK
Sbjct: 433 --IKNDVVTYNALIEGYGRHNKYVEVQKLFDEM-----KARRIYPNDLTYSTLIKIYTKG 485
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA-KD 179
EA+ +R L+ T V+ S + ALC+ G I L L+ M K
Sbjct: 486 RMYAEAMDVYRELKQEGMKTDVVF--------YSALIDALCKNGLIESSLRLLDVMTEKG 537
Query: 180 NQP 182
++P
Sbjct: 538 SRP 540
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 19/173 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G AL++ EM G + FN L+ G+ E A ME + P
Sbjct: 336 CKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLME--SKKVCP 393
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TYN +I + R +S DR LL MVE +L P+V TY L+ + V
Sbjct: 394 NVRTYNELICGFCRGKSMDRAM---ALLNKMVES--KLSPDVVTYNTLIHGLCEVGVVDS 448
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGD--PLSLYLRALCREGRIIELLEALEAM 176
A R FR ++ +G D + ++ LCR GR+ E + LE++
Sbjct: 449 ASRLFR----------LMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 27/212 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KAG +A + EM+ G +N LLS A G E A ME
Sbjct: 259 MIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREME--N 316
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++ D TYN ++ Y + YD V+ V E + + + PN+ TY+ L++ ++K
Sbjct: 317 SGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEM-----KARHVSPNLLTYSTLIDVYSKG 371
Query: 121 CAVTEAIRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
EA+ FR + + G K VL+ S + ALC+ G + + L+ M
Sbjct: 372 GLYREAMDVFREFK--KAGLKADVVLY---------SALIDALCKNGLVESAVSLLDEMT 420
Query: 178 KDNQPVPPRAMILSRKYRTLVSSWIEPLQEEA 209
K+ + P + Y +++ ++ P E+
Sbjct: 421 KEG--IRPNVV----TYNSIIDAFGRPATTES 446
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 130/312 (41%), Gaps = 54/312 (17%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTF------HFNHLLSCQATCGIPEVAFATFE 54
+I CK +ALE+ +M+ F +N L+ G E A
Sbjct: 193 LINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMG 252
Query: 55 NMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLV 114
M D P T T+NC+I Y R+ ++ +L M ++ +++PNV T LV
Sbjct: 253 KMR--SDQCAPTTATFNCLINGYCRS---GEIEVAHKLFNEM--ENAQIEPNVITLNTLV 305
Query: 115 ECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALE 174
+ K+ ++ A+ FR +Q + G K GN ++++ A C + + +E L+
Sbjct: 306 DGMCKHNRISTAVEFFRVMQ--QKGLK-----GN-NVTYTVFINAFCNVNNMNKAMEFLD 357
Query: 175 AMAKDNQPVPPRAMILSRKYRTLV------------SSWIEPLQEEAELGYEIDYIAR-- 220
M+KD P A++ Y TL+ SS + L+E G+ +D +
Sbjct: 358 EMSKDG--CFPDAVV----YYTLICGLAQAGRLDDASSVVSKLKEA---GFCLDRVCYNV 408
Query: 221 YISEGGLTGERKR---WVPRRGKTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLR 277
ISE + R W+ + PD+V + N + + F + + + K H+ + +
Sbjct: 409 LISEFCKKNKLDRAQEWLNEMELAGVKPDSVTY---NTLISYFSK--IGNFKLAHKFMKK 463
Query: 278 TLQNEG--PAVL 287
+ EG P V
Sbjct: 464 MTEEEGLSPTVF 475
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+E CK A E EME AG + +N L+S + G ++A + M E
Sbjct: 409 LISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTE-E 467
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ + P TY +I AY + D + ++ M ++ PN Y +L++ K
Sbjct: 468 EGLSPTVFTYGALIHAYCLNNNID---EAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQ 524
Query: 121 CAVTEAI 127
V A+
Sbjct: 525 TQVNFAL 531
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 66/161 (40%), Gaps = 17/161 (10%)
Query: 6 CKAGD-HSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK 64
CK G H A ++ EM+AAG +N LL P+ A ME +
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMEL--NGFS 346
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P TYN +I AY R D + EL M E K +P+V TY L+ F + V
Sbjct: 347 PSIVTYNSLISAYARDGMLD---EAMELKNQMAE--KGTKPDVFTYTTLLSGFERAGKVE 401
Query: 125 EAIRHFRALQN---------YEGGTKVLHNEGNFGDPLSLY 156
A+ F ++N + K+ N G F D + ++
Sbjct: 402 SAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIF 442
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
EM+ AG + FN L+S + CG E A + M + + PD TYN V+ A R
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML--DAGVTPDLSTYNTVLAALAR 536
Query: 80 AESYDRVQDV-AELLGMMVEDHKRLQPNVKTYALLVECF 117
+++ + V AE+ ED R +PN TY L+ +
Sbjct: 537 GGMWEQSEKVLAEM-----ED-GRCKPNELTYCSLLHAY 569
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 35/168 (20%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI C++G+ A++I +M G T FN L+ G PE + E M E
Sbjct: 144 MINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMSR-E 202
Query: 61 DYMKPDTETYNCVIQAY-----------------------------TRAESYDRVQDV-- 89
+ +KPD TYN ++QA+ T A +Y R ++
Sbjct: 203 ENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSR 262
Query: 90 -AELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNY 136
AEL+ M + ++ PNV+T ++V+ ++K + +A++ +Q +
Sbjct: 263 AAELISQM--QNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGF 308
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 31/279 (11%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G+ A ++ EM AAG +++L+ + C + ++ A+ + D +PDT
Sbjct: 363 GNADEAFKMIKEMVAAGVQPNKITYDNLV--RGLCKMGQMDRASLLLKQMVRDSHRPDTI 420
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
TYN +I+ + R S +D LL M ++ + PNV TY++++ C E +
Sbjct: 421 TYNLIIEGHFRHHSK---KDAFRLLSEM--ENAGISPNVYTYSIMIH---GLCQSGEPEK 472
Query: 129 HFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP--- 185
L+ E TK L PL + CREG + E + M K N V P
Sbjct: 473 ASDLLE--EMTTKGLKPNAFVYAPL---ISGYCREGNVSLACEIFDKMTKVN--VLPDLY 525
Query: 186 --RAMI--LSRKYRTLVSS-WIEPLQEEAELGYEIDY---IARYISEGGLTGERKRWVPR 237
++I LS+ R S+ + +QE L E Y I Y+ G L ++ V R
Sbjct: 526 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE-SAEQLVQR 584
Query: 238 RGKTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLL 276
T L P+ V IY + +E+ FK +E + +L
Sbjct: 585 MLDTGLKPNDV--IYIDLLESYFKSDDIEKVSSTFKSML 621
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 17/182 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YG 59
+I CK + A ++ EM G T +N L++ G E AF ++ME YG
Sbjct: 250 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 309
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ PD TY +I ++ R + LL M L+PNV YA L++ F +
Sbjct: 310 ---LVPDGFTYGALINGLCKSR---RSNEAKALLDEM--SCAELKPNVVVYANLIDGFMR 361
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
EA + + + V N+ + + +R LC+ G++ L+ M +D
Sbjct: 362 EGNADEAFKMIKEMV----AAGVQPNKITYDN----LVRGLCKMGQMDRASLLLKQMVRD 413
Query: 180 NQ 181
+
Sbjct: 414 SH 415
>gi|413917024|gb|AFW56956.1| hypothetical protein ZEAMMB73_276172 [Zea mays]
Length = 666
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 2 IAED--CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
IA D CK G+ + A+++ EM A G + H+ L++ G E A+ FE M
Sbjct: 408 IAMDAYCKLGNMNEAVKLLTEMMAGGLVPDKIHYTCLINGYCLKGEMENAWQVFEQML-- 465
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
++ +KPD TYN + Y+R + +V D+ E MM ++ L+PN TY + + F +
Sbjct: 466 KENVKPDVVTYNILASGYSRNGTVIKVYDLLE--HMM---NQGLEPNSLTYGVAITSFCR 520
Query: 120 YCAVTEA 126
++EA
Sbjct: 521 GGNLSEA 527
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 31/279 (11%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G+ A ++ EM AAG +++L+ + C + ++ A+ + D +PDT
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDNLV--RGLCKMGQMDRASLLLKQMVRDSHRPDTI 398
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
TYN +I+ + R S +D LL M ++ + PNV TY++++ C E +
Sbjct: 399 TYNLIIEGHFRHHSK---KDAFRLLSEM--ENAGISPNVYTYSIMIH---GLCQSGEPEK 450
Query: 129 HFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP--- 185
L+ E TK L PL + CREG + E + M K N V P
Sbjct: 451 ASDLLE--EMTTKGLKPNAFVYAPL---ISGYCREGNVSLACEIFDKMTKVN--VLPDLY 503
Query: 186 --RAMI--LSRKYRTLVSS-WIEPLQEEAELGYEIDY---IARYISEGGLTGERKRWVPR 237
++I LS+ R S+ + +QE L E Y I Y+ G L ++ V R
Sbjct: 504 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE-SAEQLVQR 562
Query: 238 RGKTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLL 276
T L P+ V IY + +E+ FK +E + +L
Sbjct: 563 MLDTGLKPNDV--IYIDLLESYFKSDDIEKVSSTFKSML 599
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 17/177 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YGEDYMK 64
CK + A ++ EM G T +N L++ G E AF ++ME YG +
Sbjct: 233 CKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG---LV 289
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TY +I ++ R + LL M L+PNV YA L++ F +
Sbjct: 290 PDGFTYGALINGLCKSR---RSNEAKALLDEM--SCAELKPNVVVYANLIDGFMREGNAD 344
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQ 181
EA + + + V N+ + + +R LC+ G++ L+ M +D+
Sbjct: 345 EAFKMIKEMV----AAGVQPNKITYDN----LVRGLCKMGQMDRASLLLKQMVRDSH 393
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 33 FNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAEL 92
FN L+ G E + E M+ G + +P+T TYNC+I + +A ++DR EL
Sbjct: 360 FNTLIDGLCKVGKEEDGLSLLEEMKMG-NINRPNTVTYNCLIDGFFKAGNFDRAH---EL 415
Query: 93 LGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDP 152
M E+ +QPNV T LV+ K+ V A+ F ++ G + N +
Sbjct: 416 FRQMNEE--GVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK----GKGLKGNAATYTAL 469
Query: 153 LSLYLRALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVS 199
+S A C I ++ E M P A++ Y +L+S
Sbjct: 470 IS----AFCGVNNINRAMQCFEEMLSSG--CSPDAVV----YYSLIS 506
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK E+ EME G T +N L+S G A E M +
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMI--K 596
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ ++P TY +I AY ++ D + ++ G M K + PN Y +L++ +
Sbjct: 597 EGLRPSVVTYGAIIHAYCSKKNVD---EGMKIFGEMCSTSK-VPPNTVIYNILIDALCRN 652
Query: 121 CAVTEAI 127
V AI
Sbjct: 653 NDVDRAI 659
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+AG HS+ +++ EM ++G + +N ++S + CG + A + E + P
Sbjct: 199 CRAGLHSHGIDLLDEMRSSGALPNRVAYNTVIS--SLCGEGQTVEAEKLVEKMREVGLSP 256
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELL-GMMVEDHKRL-QPNVKTYALLVECFTKYCAV 123
D T+NC I A ++ ++ + + + M +++ L +PN TY L++E F
Sbjct: 257 DIVTFNCRIAALCKS---GQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMF 313
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
EA F +++N E + +N +++ L R G+++E L MA+ N
Sbjct: 314 EEARAIFDSMKNSETLSLRSYN---------IWMLGLVRSGKLLEAHLILNEMAEKN 361
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
I CK G S+A + EME G + +N L+ G F + M E
Sbjct: 570 FIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQ---GLGSENQIFEIYGLMDEMK 626
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E + P+ TYN +I + +++D LL M++ K + PN+ T+ +L+ F K
Sbjct: 627 ERGIFPNVYTYNNIISCLSEG---GKLKDATCLLDEMLQ--KGISPNIYTFRILIGAFFK 681
Query: 120 YC 121
C
Sbjct: 682 AC 683
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 76/199 (38%), Gaps = 30/199 (15%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK G +A YEM G + + ++ G +VA + FE ME E
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERME--E 540
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ ETYN +I ++ +R + + M E + LQPN TY L+ K
Sbjct: 541 NGCSASIETYNAIISGLSKG---NRFSEAEKFCAKMTE--QGLQPNTITYTSLINGLCKN 595
Query: 121 CAVTEAIRHFR------ALQNYEGGTKVLHNEGNFG-----------------DPLSLYL 157
A A + F L N T +++ G D S +
Sbjct: 596 TATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLV 655
Query: 158 RALCREGRIIELLEALEAM 176
LCREGR E + +E M
Sbjct: 656 SGLCREGRSNEASQLVENM 674
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 94/231 (40%), Gaps = 42/231 (18%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK GD N+ + +M G +N L+ G E + F M+ +
Sbjct: 295 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK--D 352
Query: 61 DYMKPDTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
PD TYN +I Y + E R + +E+ + L+PNV TY+ L++ F K
Sbjct: 353 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM------KNNGLKPNVVTYSTLIDAFCK 406
Query: 120 YCAVTEAIRHFRALQ-----------------NYEGGT-----KVLHNEGNFGDPLSL-- 155
+ AI+ F ++ N + G K+L++ G L++
Sbjct: 407 EGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 466
Query: 156 ---YLRALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIE 203
L LC+ GR+IE E +M KD + P + Y LV +I+
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDG--ISPNQQV----YTALVHGYIK 511
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+AG HS+ +++ EM ++G + +N ++S + CG + A + E + P
Sbjct: 199 CRAGLHSHGIDLLDEMRSSGALPNRVAYNTVIS--SLCGEGQTVEAEKLVEKMREVGLSP 256
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELL-GMMVEDHKRL-QPNVKTYALLVECFTKYCAV 123
D T+NC I A ++ ++ + + + M +++ L +PN TY L++E F
Sbjct: 257 DIVTFNCRIAALCKS---GQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMF 313
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
EA F +++N E + +N +++ L R G+++E L MA+ N
Sbjct: 314 EEARAIFDSMKNSETLSLRSYN---------IWMLGLVRSGKLLEAHLILNEMAEKN 361
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
I CK G S+A + EME G + +N L+ G F + M E
Sbjct: 570 FIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQ---GLGSENQIFEIYGLMDEMK 626
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E + P+ TYN +I + +++D LL M++ K + PN+ T+ +L+ F K
Sbjct: 627 ERGIFPNVYTYNNIISCLSEG---GKLKDATCLLDEMLQ--KGISPNIYTFRILIGAFFK 681
Query: 120 YC 121
C
Sbjct: 682 AC 683
>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
Length = 348
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G+ +AL++ +ME +N ++ G + A + F ME + +K
Sbjct: 232 CKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEME--REGIKA 289
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D TYN +I + A +D D A+LL M+ + + PNV T++ L++CF K
Sbjct: 290 DVITYNSLIGGFCNAGRWD---DGAQLLRDMIT--RNITPNVVTFSALIDCFVK 338
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M AG T F +N ++ C G E A FE M++ + PDT TYN +I + +
Sbjct: 120 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG--LVPDTVTYNSMIDGFGK 177
Query: 80 AESY-DRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEG 138
D V E+ M E P+V TY L+ CF K+ + + +R ++
Sbjct: 178 VGRLDDTVCFFEEMKDMCCE------PDVITYNALINCFCKFGKLPIGLEFYREMK---- 227
Query: 139 GTKVLHNEGNFGDPLSLYLRALCREGRI 166
G + N ++ S + A C+EG +
Sbjct: 228 GNGLKPNVVSY----STLVDAFCKEGMM 251
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK GD A + EM+ G + T +N ++ G + FE M+ +
Sbjct: 136 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK--D 193
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD TYN +I + + + ++ E M L+PNV +Y+ LV+ F K
Sbjct: 194 MCCEPDVITYNALINCFCK---FGKLPIGLEFYREM--KGNGLKPNVVSYSTLVDAFCKE 248
Query: 121 CAVTEAIRHF 130
+ +AI+ +
Sbjct: 249 GMMQQAIKFY 258
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 121/279 (43%), Gaps = 31/279 (11%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G+ A ++ EM AAG +++L+ + C + ++ A+ + D +PDT
Sbjct: 236 GNADEAFKMIKEMVAAGVQPNKITYDNLV--RGLCKMGQMDRASLLLKQMVRDSHRPDTI 293
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
TYN +I+ + R + +D LL M ++ + PNV TY++++ C E +
Sbjct: 294 TYNLIIEGHFR---HHNKKDAFRLLSEM--ENAGISPNVYTYSIMIH---GLCQSGEPEK 345
Query: 129 HFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP--- 185
L+ E TK L PL + CREG + E + M K N V P
Sbjct: 346 ASDLLE--EMTTKGLKPNAFVYAPL---ISGYCREGNVSLACEIFDKMTKVN--VLPDLY 398
Query: 186 --RAMI--LSRKYRTLVSS-WIEPLQEEAELGYEIDY---IARYISEGGLTGERKRWVPR 237
++I LS+ R S+ + +QE L E Y I Y+ G L ++ V R
Sbjct: 399 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE-SAEQLVQR 457
Query: 238 RGKTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLL 276
T L P+ V IY + +E+ FK +E + +L
Sbjct: 458 MLDTGLKPNDV--IYIDLLESYFKSDDIEKVSSTFKSML 494
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 17/182 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YG 59
+I CK + A ++ EM G T +N L++ G E AF ++ME YG
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 182
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ PD TY +I ++ R + LL M L+PNV YA L++ F +
Sbjct: 183 ---LVPDGFTYGALINGLCKSR---RSNEAKALLDEM--SCAELKPNVVVYANLIDGFMR 234
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
EA + + + V N+ + + +R LC+ G++ L+ M +D
Sbjct: 235 EGNADEAFKMIKEMV----AAGVQPNKITYDN----LVRGLCKMGQMDRASLLLKQMVRD 286
Query: 180 NQ 181
+
Sbjct: 287 SH 288
>gi|422292736|gb|EKU20038.1| hypothetical protein NGA_2025410 [Nannochloropsis gaditana CCMP526]
gi|422295019|gb|EKU22318.1| hypothetical protein NGA_2025420 [Nannochloropsis gaditana CCMP526]
Length = 527
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 12 SNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYN 71
S A++I MEA G + +++LLSC C EVA + + M + ++KP+ E Y+
Sbjct: 208 SKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMR-DKGHVKPNLELYS 266
Query: 72 CVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ + +A D Q V M R+QPN+ TY L+E F +
Sbjct: 267 LAVDMFAKAG--DTTQAVTIFKEM---RRNRVQPNLVTYTALMEAFVR 309
>gi|387192495|gb|AFJ68660.1| hypothetical protein NGATSA_2025410, partial [Nannochloropsis
gaditana CCMP526]
Length = 527
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 12 SNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYN 71
S A++I MEA G + +++LLSC C EVA + + M + ++KP+ E Y+
Sbjct: 208 SKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMR-DKGHVKPNLELYS 266
Query: 72 CVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ + +A D Q V M R+QPN+ TY L+E F +
Sbjct: 267 LAVDMFAKAG--DTTQAVTIFKEM---RRNRVQPNLVTYTALMEAFVR 309
>gi|414878623|tpg|DAA55754.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
Length = 891
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 40/225 (17%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ + A+++ EM A + H+ L++ G E A+ FE M +KP
Sbjct: 325 CKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKAN--IKP 382
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN + Y+R +V D+ E MM + L+PN TY + + F + ++E
Sbjct: 383 DVVTYNILASGYSRNGLVMKVFDILE--HMM---DQGLEPNSLTYGIAIAGFCRGGNLSE 437
Query: 126 AIRHFRALQ-------NYEGGTKV---LHN---------------EGNFGDPLSL--YLR 158
A F ++ N G+ V LH+ +GN D LS +
Sbjct: 438 AEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLIN 497
Query: 159 ALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIE 203
LCR+ ++ E + M + N V P + Y L+S++ +
Sbjct: 498 GLCRDEKVGEASTVCKMMLEKN--VVPDVI----SYSKLISAYCQ 536
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G + A ++ + G + TT +N L++ + AF+ FE M+ +++P
Sbjct: 346 CKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMK--SRHIRP 403
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I + E +D+ +M + + P+V+T+ L++ + + + +
Sbjct: 404 DHITYNALINGLCKMEMITEAEDL-----VMEMEKSGVDPSVETFNTLIDAYGRAGQLEK 458
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
+Q+ + V+ +FG ++A C+ G+I E + L+ M ++ V P
Sbjct: 459 CFTVLSDMQDKGIKSNVI----SFGS----VVKAFCKNGKIPEAVAILDDMI--HKDVVP 508
Query: 186 RAMILSRKYRTLVSSWIE 203
A + Y +++ ++IE
Sbjct: 509 NAQV----YNSIIDAYIE 522
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
GD A + EM+A G +N L+ G+ A + FE M+ + +PD
Sbjct: 265 GDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMK--DAGCEPDVI 322
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
TYN +I + + ++R+ E L M + LQPNV TY+ L++ F K + EA +
Sbjct: 323 TYNSLINCFCK---FERIPQAFEYLHGM--KQRGLQPNVVTYSTLIDAFCKAGMLLEANK 377
Query: 129 HF 130
F
Sbjct: 378 FF 379
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 15/162 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+ AL +M AG + F +N ++ C A G E A + FE M+ ++PD
Sbjct: 228 KSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMK--AKGLRPD 285
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN +I Y + V E + +P+V TY L+ CF K+ + +A
Sbjct: 286 IVTYNSLIDGYGKVGMLTGAVSVFEEM-----KDAGCEPDVITYNSLINCFCKFERIPQA 340
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
+ ++ V+ S + A C+ G ++E
Sbjct: 341 FEYLHGMKQRGLQPNVV--------TYSTLIDAFCKAGMLLE 374
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 557 WEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLY 616
W+V+ Q +I+ G +P+ A ++ A RA KI ++ G LY
Sbjct: 333 WQVKKFYQ---DIIDNGLSPSFVTYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLY 389
Query: 617 DEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDRVIT 656
+ I+++C DLG +D AV I DM+++GI T +IT
Sbjct: 390 NSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMIT 429
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G + A +I EM AG + +N L+ G E + M+ +P
Sbjct: 244 CRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMK--RLGCEP 301
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
DT TYN +I+ + + E+ ++D +++G+M + K PN T+ L C K V
Sbjct: 302 DTVTYNFLIETHCKDEN---LEDAIKVIGLMAK--KGCAPNASTFNTLFGCIAKLGDVNA 356
Query: 126 AIRHFRALQ--NYEGGT 140
A R ++ ++ N E T
Sbjct: 357 AHRMYKKMKELNCEANT 373
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK + +A+++ M G FN L C A G A ++ M+ E
Sbjct: 309 LIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMK--E 366
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ +T TYN +++ + ++S D V + + D +++PNV TY +L+ T Y
Sbjct: 367 LNCEANTVTYNTLMKMFVASKSTDMVLKLKTEM-----DENKIEPNVNTYKVLI---TMY 418
Query: 121 CAV---TEAIRHFRAL 133
C + A + FR +
Sbjct: 419 CGMGHWNNAYKFFREM 434
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C+ +A+ + ++ G +N L+ E + +ME +
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME--K 574
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ MKPD+ TYN +I + + + ++ V+ + E M ED L P V TY ++E +
Sbjct: 575 EGMKPDSITYNTLISFFGKHKDFESVERMME---QMREDE--LDPTVATYGAVIEAYCSV 629
Query: 121 CAVTEAIRHFR--ALQNYEGGTKVLHN--------EGNFGDPLSL 155
+ EA++ F+ L++ V++N GNFG LSL
Sbjct: 630 GELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSL 674
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 29/202 (14%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEV--AFATFENMEYGEDYM 63
CK G + A ++ + G + TT +N L++ C + ++ AF FE M+ ++
Sbjct: 167 CKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLIN--GYCQVRDLRGAFCIFEQMK--SRHI 222
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
+PD TYN +I + E + +D+ +M + + P+V+T+ L++ Y
Sbjct: 223 RPDHITYNALINGLCKLEMVTKAEDL-----VMEMEKSGVDPSVETFNTLID---AYGTA 274
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDNQ 181
+ + F L + + +G D +S ++A C+ G+I E + L+ M +
Sbjct: 275 GQLEKCFTVLSD-------MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD- 326
Query: 182 PVPPRAMILSRKYRTLVSSWIE 203
V P A + Y +++ ++IE
Sbjct: 327 -VAPNAQV----YNSIIDAYIE 343
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 30/216 (13%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK + A ++ EME +G + FN L+ T G E F +M+ + +K
Sbjct: 237 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ--QKGIKS 294
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D ++ V++A+ + ++ + +L M+ +K + PN + Y +++ + + +
Sbjct: 295 DVISFGSVVKAFCKN---GKIPEAVAILDDMI--YKDVAPNAQVYNSIIDAYIESGDTEQ 349
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
A ++N ++ +L L+ LCR +I E E + + NQ + P
Sbjct: 350 AFLLVEKMKNSGVSASIV--------TYNLLLKGLCRSSQIDEAEELIYTLR--NQGLRP 399
Query: 186 RAMILSRKYRTLVSSW---------IEPLQEEAELG 212
+ Y T++S+ +E LQE + G
Sbjct: 400 DVV----SYNTIISACCNKGDTDKALELLQEMNKYG 431
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAGD A EI EMEA G + L++ A +PE A + FE M+ E +KP
Sbjct: 740 CKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAE--LKP 797
Query: 66 DTETYNCVIQAY----TRAESY 83
D Y+C++ + T A+SY
Sbjct: 798 DKAAYHCLMTSLLSRATFAQSY 819
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ + A + EME G A ++ ++ G E F+ ++ E
Sbjct: 385 IIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLK--E 442
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
P +Y C+I YT+ + +++++ M H N+KTY++L+ F K
Sbjct: 443 CGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKH-----NMKTYSMLINGFLK 496
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEV--AFATFENMEYGEDYM 63
CK GD AL + +MEAA A FN ++ + C V A F+ ME +
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTII--DSLCKYRHVDDALNLFKEME--TKGI 291
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
+P+ TY+ +I SY R D ++LL M+E K++ PN+ T+ L++ F K
Sbjct: 292 RPNVVTYSSLISCLC---SYGRWSDASQLLSDMIE--KKINPNLVTFNALIDAFVKEGKF 346
Query: 124 TEA 126
EA
Sbjct: 347 VEA 349
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEV--AFATFENMEYGEDYM 63
CK GD AL + +MEAA A FN ++ + C V A F+ ME +
Sbjct: 198 CKRGDTDLALNLLNKMEAAKIEADVVIFNTII--DSLCKYRHVDDALNLFKEME--TKGI 253
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
+P+ TY+ +I SY R D ++LL M+E K++ PN+ T+ L++ F K
Sbjct: 254 RPNVVTYSSLISCLC---SYGRWSDASQLLSDMIE--KKINPNLVTFNALIDAFVKEGKF 308
Query: 124 TEA 126
EA
Sbjct: 309 VEA 311
>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA C+ G+ A ++ YEM G ++ ++ L+ G+ + A F +E E
Sbjct: 419 LIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILE--E 476
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
+ +PD + YN +I + +A+ R E+ MMV +K PN TY +LVE
Sbjct: 477 NDHRPDIDNYNALILGFCKAQ---RTDLSIEIFLMMV--NKGCVPNENTYTILVE 526
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ A+++ +ME G T +N L+ G + + + + + P
Sbjct: 145 CKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLT--KKGLIP 202
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY+ +++A + D + +LL ++ K +PN+ +Y +L+ K E
Sbjct: 203 NAFTYSFLLEAAYKERGVD---EAMKLLDDIIA--KGGEPNLVSYNVLLTGLCKEGRTEE 257
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP 182
AI+ F+ L V+ ++ LR+LC EGR E E L M K++QP
Sbjct: 258 AIKLFQELPVKGFSPSVVS--------FNILLRSLCYEGRWEEANELLAEMDKEDQP 306
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 96/210 (45%), Gaps = 29/210 (13%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEV--AFATFENMEYGEDYM 63
CK G + A ++ + G + TT +N L++ C + ++ AF FE M+ ++
Sbjct: 345 CKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLIN--GYCQVRDLRGAFCIFEQMK--SRHI 400
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
+PD TYN +I + E + +D+ +M + + P+V+T+ L++ Y
Sbjct: 401 RPDHITYNALINGLCKLEMVTKAEDL-----VMEMEKSGVDPSVETFNTLID---AYGTA 452
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDNQ 181
+ + F L + + +G D +S ++A C+ G+I E + L+ M +
Sbjct: 453 GQLEKCFTVLSD-------MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD- 504
Query: 182 PVPPRAMILSRKYRTLVSSWIEPLQEEAEL 211
V P A + Y +++ ++IE E L
Sbjct: 505 -VAPNAQV----YNSIIDAYIESGDTEQAL 529
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 30/221 (13%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK + A ++ EME +G + FN L+ T G E F +M+ +
Sbjct: 410 LINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ--Q 467
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+K D ++ V++A+ + ++ + +L M+ +K + PN + Y +++ + +
Sbjct: 468 KGIKSDVISFGSVVKAFCKN---GKIPEAVAILDDMI--YKDVAPNAQVYNSIIDAYIES 522
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+A+ ++N ++ +L L+ LCR +I E E + + N
Sbjct: 523 GDTEQALLLVEKMKNSGVSASIV--------TYNLLLKGLCRSSQIDEAEELIYTL--RN 572
Query: 181 QPVPPRAMILSRKYRTLVSSW---------IEPLQEEAELG 212
Q + P + Y T++S+ +E LQE + G
Sbjct: 573 QGLRPDVV----SYNTIISACCNKGDTDKALELLQEMNKYG 609
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G H A E+ EMEAAG +N L++ A G+ + A A +++ + PD
Sbjct: 331 KGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLL--SKGLCPD 388
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHK-RLQPNVKTYALLVECFTKYCAVTE 125
TY +I A+ RAE Y++ L E K PN+ TY +L++ + + + +
Sbjct: 389 EFTYCTLISAFNRAERYEKA------LETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDD 442
Query: 126 AIRHFRALQ 134
++ F+ +Q
Sbjct: 443 MMKVFKFMQ 451
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G + A ++ G FN ++S A G E A E + + +KP
Sbjct: 611 CKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQ--LKP 668
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRL--QPNVKTYALLVECFTKYCAV 123
D TYNC++ Y R Y + ++V + + +R PN+ TY L+ +TK+ +
Sbjct: 669 DGVTYNCLMSMYGREGMYYKAEEV-------MSEMRRAGKAPNLITYNTLLYSYTKHGRM 721
Query: 124 TEAIRHF 130
+A R F
Sbjct: 722 DDAARVF 728
>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
Length = 654
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M AG + +N LL G+ + A F+ M ED ++PD +YN +I+ Y RA
Sbjct: 209 MRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMST-EDQVRPDVVSYNILIKGYCRA 267
Query: 81 -ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGG 139
++D + ++E+ ++ +L P+ TY L++C I F+ ++ G
Sbjct: 268 GRAHDAMARLSEM-----QEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMG 322
Query: 140 TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
+ + L + ALC++G+ E + E M K
Sbjct: 323 NDIPQHA------YVLVIGALCKDGKPFEGMAVFERMLK 355
>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 657
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M AG + +N LL G+ + A F+ M ED ++PD +YN +I+ Y RA
Sbjct: 212 MRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMST-EDQVRPDVVSYNILIKGYCRA 270
Query: 81 -ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGG 139
++D + ++E+ ++ +L P+ TY L++C I F+ ++ G
Sbjct: 271 GRAHDAMARLSEM-----QEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMG 325
Query: 140 TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
+ + L + ALC++G+ E + E M K
Sbjct: 326 NDIPQHA------YVLVIGALCKDGKPFEGMAVFERMLK 358
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 14/183 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEY-G 59
+I CKAG+ A I ME G AT +N L+ C + F ++
Sbjct: 303 IIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKART 362
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E + P +Y C+I Y++ D+ ++ + ED + ++ N KTY+++++ + +
Sbjct: 363 ETGLSPTVVSYGCLINLYSKLGKMDKALQISNEM----ED-QGIKHNRKTYSMIIDGYVQ 417
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
A F + N G K G ++ + A C+ G++ LE L M
Sbjct: 418 LGDTANAFSVFEDMSN--AGIK------PDGITYNILMNAFCKNGQMNRALELLARMESG 469
Query: 180 NQP 182
+ P
Sbjct: 470 DCP 472
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 21/198 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G + ALE+ ME+ T + ++ G +AF T +M+ +P
Sbjct: 451 CKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAG--FRP 508
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
TYN ++ +A DR A ++ MV + PN ++Y L+E + +
Sbjct: 509 SAATYNVIMHGLAQAGQMDR---AASIIDEMVV--AGVHPNERSYTTLIEGYACIGDMGL 563
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
A ++F ++ V+ + L+A C+ GR+ L MA P+
Sbjct: 564 AFKYFNRIKEVGLKPDVI--------AYASLLKACCKAGRMQSTLAITAEMAAAGVPMN- 614
Query: 186 RAMILSRKYRTLVSSWIE 203
+ Y L+ W +
Sbjct: 615 -----NYIYNILLDGWAQ 627
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++ + G+ A EI E+++ G + + +N LL + P A F+ M E
Sbjct: 238 LMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMV--E 295
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++PD +YN +I A+ RA Q V + + +P +K++ LL+ + K
Sbjct: 296 AGVRPDQVSYNILIDAFGRAGLTADAQAVYDSM-----KEAGFKPTMKSHMLLLSSYAKA 350
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
VTEA R R ++N + V + F LS Y GRI E+ LE+M
Sbjct: 351 GKVTEAERLVREIEN----SGVKPDTFMFNSLLSAY----GNSGRIDEMESLLESM 398
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+++ KAG + A + E+E +G TF FN LLS G + + E+M
Sbjct: 343 LLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMV--S 400
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
KPD T N +I AY + ++ ++V L + K L P+V ++ L+ + +
Sbjct: 401 SVAKPDISTLNTLINAYAQGGYIEKAEEVFNSL-----ESKGLTPDVMSWTSLMGAYAQ 454
>gi|295830921|gb|ADG39129.1| AT5G21222-like protein [Neslia paniculata]
Length = 166
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + ++E G T FN +++ + G + A FE M+ E KP T T+N +I
Sbjct: 30 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEQMK--ESGCKPTTSTFNTLI 87
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ Y + ++++ + LL MM+ D + LQPN +T +LV+ + V EA + +Q
Sbjct: 88 KGYGK---LGKLEESSRLLEMMLRD-EMLQPNDRTCNILVQAWCNQRKVEEAWQIVYKMQ 143
Query: 135 NY 136
+Y
Sbjct: 144 SY 145
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 93/231 (40%), Gaps = 42/231 (18%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK GD N+ + +M G +N L+ G E + F M+ +
Sbjct: 236 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK--D 293
Query: 61 DYMKPDTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
PD TYN +I Y + E R + +E+ + L+PNV TY+ L++ F K
Sbjct: 294 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM------KNNGLKPNVVTYSTLIDAFCK 347
Query: 120 YCAVTEAIRHFRALQ-----------------NYEGGT-----KVLHNEGNFGDPLSL-- 155
+ AI+ ++ N + G K+L++ G L++
Sbjct: 348 EGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 407
Query: 156 ---YLRALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIE 203
L LC+ GR+IE E +M KD + P + Y LV +I+
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDG--ISPNQQV----YTALVHGYIK 452
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+G+ + +M AG + F +N ++ G E + F M E + PD
Sbjct: 207 KSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR--EMGLSPD 264
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN +I Y + S +++VA L M + P++ TY L+ C+ K+ + A
Sbjct: 265 VVTYNSLIDGYGKVGS---LEEVASLFNEMKD--VGCVPDIITYNGLINCYCKFEKMPRA 319
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
+F ++N V+ S + A C+EG +
Sbjct: 320 FEYFSEMKNNGLKPNVV--------TYSTLIDAFCKEGMM 351
>gi|449437886|ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cucumis sativus]
gi|449501176|ref|XP_004161299.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cucumis sativus]
Length = 1037
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 10 DHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTET 69
D + + YEM G T + + ++ A G+ E+A ++E M+ E +KP+ T
Sbjct: 698 DFKHMRSLFYEMRRRGCSITPYTWTIMIMQYARAGLTEIALKSYEEMK--EINIKPNANT 755
Query: 70 YNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA--- 126
Y +I + ++ +V + L M+ H + P+ + + C K +++A
Sbjct: 756 YKYLIMSLCESKR-RKVDEAITLFQEMI--HSKYIPDKELLETYLGCLCKLSRLSDAKKC 812
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRIIELLEALEAMAKDNQPVP 184
I H R + F PL SLY+RALCR ++ E L LE + D
Sbjct: 813 IDHLRKV--------------GFSIPLTYSLYIRALCRARKLDEALTLLEEVVGDE---- 854
Query: 185 PRAMILSRKYRTLVSSWIEPLQEEAELG 212
R+ + S Y +LV ++ + E L
Sbjct: 855 -RSKLDSYIYGSLVYGLLQTGRTEEALA 881
>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
Length = 658
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M AG + +N LL G+ + A F+ M ED ++PD +YN +I+ Y RA
Sbjct: 213 MRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMST-EDQVRPDVVSYNILIKGYCRA 271
Query: 81 -ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGG 139
++D + ++E+ ++ +L P+ TY L++C I F+ ++ G
Sbjct: 272 GRAHDAMARLSEM-----QEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMG 326
Query: 140 TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
+ + L + ALC++G+ E + E M K
Sbjct: 327 NDIPQHA------YVLVIGALCKDGKPFEGMAVFERMLK 359
>gi|356567150|ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 875
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++A KA +AL I EM+ +N L+ A G E A F+ ME
Sbjct: 372 LMAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCG 431
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+K D TYN +I+ Y R Y V+ + + + +R+ PN TY+ L++ +TK
Sbjct: 432 --IKNDVVTYNALIEGYGRHNKYVEVRKLFDEM-----KARRIYPNDLTYSTLIKIYTKG 484
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA-KD 179
EA+ +R L+ T V+ S + ALC+ G I L L+ M K
Sbjct: 485 RMYAEAMDVYRELKQEGMKTDVVF--------YSALIDALCKNGLIESSLRLLDVMTEKG 536
Query: 180 NQP 182
++P
Sbjct: 537 SRP 539
>gi|168056841|ref|XP_001780426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695174|dbj|BAD67152.1| PpPPR_38 [Physcomitrella patens]
gi|162668102|gb|EDQ54716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 11/137 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++A KAG N +I M+A+G A+T +N L++ + PE A A + M+
Sbjct: 290 LVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQ--A 347
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFT 118
D + D TY V++AY+R ++ +AE M+ + KR +QP +Y +L+ +
Sbjct: 348 DGCQCDEITYTSVMEAYSR----NKQPLMAE---SMMGEMKRAGIQPGPVSYGVLISAYC 400
Query: 119 KYCAVTEAIRHFRALQN 135
+ + +A R RA+QN
Sbjct: 401 RAGRLGDAERILRAMQN 417
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 29/202 (14%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEV--AFATFENMEYGEDYM 63
CK G + A ++ + G + TT +N L++ C + ++ AF FE M+ ++
Sbjct: 345 CKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLIN--GYCQVRDLRGAFCIFEQMK--SRHI 400
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
+PD TYN +I + E + +D+ +M + + P+V+T+ L++ Y
Sbjct: 401 RPDHITYNALINGLCKLEMVTKAEDL-----VMEMEKSGVDPSVETFNTLID---AYGTA 452
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDNQ 181
+ + F L + + +G D +S ++A C+ G+I E + L+ M +
Sbjct: 453 GQLEKCFTVLSD-------MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD- 504
Query: 182 PVPPRAMILSRKYRTLVSSWIE 203
V P A + Y +++ ++IE
Sbjct: 505 -VAPNAQV----YNSIIDAYIE 521
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK + A ++ EME +G + FN L+ T G E F +M+ +
Sbjct: 410 LINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ--Q 467
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+K D ++ V++A+ + ++ + +L M+ +K + PN + Y +++ + +
Sbjct: 468 KGIKSDVISFGSVVKAFCKN---GKIPEAVAILDDMI--YKDVAPNAQVYNSIIDAYIES 522
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+A ++N ++ +L L+ LCR +I E E + + N
Sbjct: 523 GDTEQAFLLVEKMKNSGVSASIV--------TYNLLLKGLCRSSQIDEAEELIYTL--RN 572
Query: 181 QPVPPRAMILSRKYRTLVSSW---------IEPLQEEAELG 212
Q + P + Y T++S+ +E LQE + G
Sbjct: 573 QGLRPDVV----SYNTIISACCNKGDTDKALELLQEMNKYG 609
>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
Length = 821
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 44/228 (19%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ + A+++ EM A G + H+ L++ G E A+ FE M +KP
Sbjct: 415 CKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKAN--IKP 472
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN + Y+R V V +LL M++ + L+PN TY + + F + ++E
Sbjct: 473 DVVTYNILSSGYSRN---GLVMKVFDLLEHMMD--QGLEPNSLTYGIAIAGFCRGGNLSE 527
Query: 126 AIRHFRALQNYEGG------------TKVLHN---------------EGNFGDPLSL--Y 156
A F ++ E G LH+ +GN D LS
Sbjct: 528 AEVLFNIVE--EKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKL 585
Query: 157 LRALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIEP 204
+ LCR+ ++ E M + N V P + Y L+S++ +
Sbjct: 586 INGLCRDEKVQEASTVCSMMLEKN--VVPHVI----SYSKLISAYCQS 627
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD A E+ +EM + G F +N L++ G E A T +M+ E +KP
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD--EAGLKP 528
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
D TY +I A +++ DR LL M++ K ++P + TY +L+ F
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHS---LLQEMLD--KGIKPTIVTYNVLMNGF 575
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD A E+ +EM + G F +N L++ G E A T +M+ E +KP
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD--EAGLKP 528
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
D TY +I A +++ DR LL M++ K ++P + TY +L+ F
Sbjct: 529 DVYTYTTIIGALCQSKELDRAH---SLLQEMLD--KGIKPTIVTYNVLMNGF 575
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD A E+ +EM + G F +N L++ G E A T +M+ E +KP
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD--EAGLKP 528
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
D TY +I A +++ DR LL M++ K ++P + TY +L+ F
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHS---LLQEMLD--KGIKPTIVTYNVLMNGF 575
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 11/137 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++A KAG N +I M+A+G A+T +N L++ + PE A A + M+
Sbjct: 290 LVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQ--A 347
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFT 118
D + D TY V++AY+R ++ +AE M+ + KR +QP +Y +L+ +
Sbjct: 348 DGCQCDEITYTSVMEAYSR----NKQPLMAE---SMMGEMKRAGIQPGPVSYGVLISAYC 400
Query: 119 KYCAVTEAIRHFRALQN 135
+ + +A R RA+QN
Sbjct: 401 RAGRLGDAERILRAMQN 417
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C+AG +A I M+ A T +N ++S A+ + A F+ M+ +
Sbjct: 395 LISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQ--D 452
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDV---AELLGMMVEDHKRLQPNVKTYALLVECF 117
++PD T+N +I Y ++ + +D + LG +PN TY +L++ +
Sbjct: 453 CGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLG--------CKPNAVTYKILLKAY 504
Query: 118 TKY 120
T Y
Sbjct: 505 TDY 507
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
AG ++E ME T +N L+ G + A A + M G+ ++PDT
Sbjct: 67 AGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVM--GQSGLRPDT 124
Query: 68 ETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAI 127
T+N ++ A+ +A+ D V + E + ++ PNV TY++L++ K V +A+
Sbjct: 125 YTFNVLMNAFKKAKRVDSVWKLFEEM-----QNQNCSPNVITYSILIDAVCKCGGVEKAL 179
Query: 128 RHF 130
+ F
Sbjct: 180 KVF 182
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 16/179 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK+ A EI E+E G + + FN L+ G AF +M+
Sbjct: 305 LIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG 364
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD YN +I ++ RV++ +LL M +P+V TY L++ K
Sbjct: 365 --CTPDVTVYNTLIDGLRKS---GRVEEAGQLLLEM--QSLGYEPDVVTYNTLIDESCKG 417
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ +A+R F + V +N L LC GR+ E + M ++
Sbjct: 418 GRIEDALRLFEEISAKGFANTVTYNT---------ILNGLCMAGRVDEAYKLFNGMKQE 467
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G A E+ EM G + L+ G E AF F + +
Sbjct: 307 LINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD 366
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
DY KP+ TY +I Y + + +R + LL M E + L PN KTY L++ +K
Sbjct: 367 DY-KPNVHTYTSMIHGYCKEDKLNRAE---MLLSRMKE--QGLVPNTKTYTCLIDGHSK- 419
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALE 174
E L EG + + F D +LC++GR +E + L+
Sbjct: 420 AGNFEKAYELMDLMGKEGFSANIFTYNAFID-------SLCKKGRFLEACKLLK 466
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 17/161 (10%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G + +M AG T F +N ++ C G E A FE M++ + PD
Sbjct: 239 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG--LVPD 296
Query: 67 TETYNCVIQAYTRAESY-DRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
T TYN +I + + D V E+ M E P+V TY L+ CF K+ +
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE------PDVITYNALINCFCKFGKLPI 350
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
+ +R ++ G + N ++ S + A C+EG +
Sbjct: 351 GLEFYREMK----GNGLKPNVVSY----STLVDAFCKEGMM 383
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK GD A + EM+ G + T +N ++ G + FE M+ +
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK--D 325
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD TYN +I + + + ++ E M L+PNV +Y+ LV+ F K
Sbjct: 326 MCCEPDVITYNALINCFCK---FGKLPIGLEFYREM--KGNGLKPNVVSYSTLVDAFCKE 380
Query: 121 CAVTEAIRHF 130
+ +AI+ +
Sbjct: 381 GMMQQAIKFY 390
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ +AG +A +A M+ AG T +N L++ A+ + M+ E
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK--E 416
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++PD TYN ++ +A + V ELLG M++D QP+V T+ LV + K
Sbjct: 417 VGIRPDVCTYNTLLSGSCKAGDFAAVD---ELLGKMIDDG--CQPSVITFGTLVHGYCKV 471
Query: 121 CAVTEAIRHFRALQNYEGG---TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+ EA+R R++ E G V++N + LC+ G + +E + M
Sbjct: 472 GKIDEALRILRSMD--ESGIHPNNVIYNT---------LIDFLCKRGDVDLAIELFDEMK 520
Query: 178 KDNQP 182
+ + P
Sbjct: 521 EKSVP 525
>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
Length = 567
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C+ G+ A ++ YEM G + ++ ++ L+ + G+ + A F ME E
Sbjct: 417 VISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIME--E 474
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
+Y +PD + +N +I + D V E MMV+ K PN TY ++VE
Sbjct: 475 NYCRPDVDNFNALILGLCKCRKTDLSLMVFE---MMVK--KGYMPNETTYTIIVE 524
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 33 FNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAEL 92
FN L++ A CG+ A FE+M+ + + PD TY VI A+ R S D D +
Sbjct: 389 FNILVNGYAKCGMVREAMFIFEDMQ--KRGLNPDVLTYLAVIHAFCRMGSMD---DAMDK 443
Query: 93 LGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDP 152
M++ K ++PN Y L++ F + + +A ++N G +L
Sbjct: 444 FNHMID--KGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCIL--------S 493
Query: 153 LSLYLRALCREGRIIE 168
+ + LC+EGR+ E
Sbjct: 494 FASLINHLCKEGRVFE 509
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 26/152 (17%)
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P+ TYN VI A +A + D+ Q + L MV + +QP+ TY L+ ++
Sbjct: 244 PNVVTYNSVIHALCKARAVDKAQGI---LRQMVGN--GVQPDNVTYNTLIHGYSTLGQWK 298
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
+A+R F+ + + V+ N S ++ LC+ GRI E E ++M
Sbjct: 299 QAVRMFKEMTS----RGVIPNT----VTCSTFVAFLCKHGRIEEAREFFDSM-------- 342
Query: 185 PRAMILSRKYRTLVSSWIEPLQEEAELGYEID 216
L++ ++ + S+ L A G +D
Sbjct: 343 -----LAKGHKLNIISYSTLLHGYATAGCLVD 369
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ CKAG AL I EM++ T F ++ L+ E A +TF ME
Sbjct: 200 MVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEME--N 257
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ ++PD YN +I A+ +A +R+++V +L M D K + PN +T+ +++
Sbjct: 258 NGIEPDVAVYNALIGAFCKA---NRLKNVYRVLNEM--DCKGVTPNSRTFNIILSSLIGR 312
Query: 121 CAVTEAIRHF 130
EA R F
Sbjct: 313 GETDEAYRVF 322
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKA N + EM+ G + FN +LS G + A+ F M
Sbjct: 270 LIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRM---I 326
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD +TY +I+ + + + V + + + KR P++ T+ +L+ +
Sbjct: 327 KVCEPDADTYTMMIKMFCERDELKKALKVWKYMKL-----KRFMPSMHTFQVLINGLCEK 381
Query: 121 CAVTEA 126
VT+A
Sbjct: 382 GDVTQA 387
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
I CKAGD A EI EMEA+G + L++ A +PE A + FE M+
Sbjct: 745 FINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAG 804
Query: 61 DYMKPDTETYNCVIQAY----TRAESY 83
KPD Y+C++ + T A+SY
Sbjct: 805 --FKPDKAVYHCLVTSLLSRATFAQSY 829
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM A TF +N L+ A G A + M ++ + P
Sbjct: 680 CKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMR--KEGLLP 737
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TY I A +A + ++ + + + ++PN+KTY L+ + + +
Sbjct: 738 DIHTYTSFINACCKAGDMQKATEIIQEM-----EASGIKPNLKTYTTLINGWARASMPEK 792
Query: 126 AIRHFRALQ 134
A+ F ++
Sbjct: 793 ALSCFEEMK 801
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI ++G+ A++I +M+ G TT FN L+ G PE M +
Sbjct: 134 MINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSL-D 192
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KP+ TYN +++A+ S +++ +L MV +QP+V TY +L + +
Sbjct: 193 GSVKPNDRTYNILVRAWC---SKKNIEEAWNVLHKMVASG--IQPDVVTYNILARAYAQK 247
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
A +Q YE KV NE G + + C+EG +IE L + M
Sbjct: 248 GETLRAEDLILEMQ-YE---KVAPNERTCG----IIVNGYCKEGNMIEALRFVYRM 295
>gi|414878622|tpg|DAA55753.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
Length = 573
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 42/231 (18%)
Query: 2 IAED--CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
IA D CK G+ + A+++ EM A + H+ L++ G E A+ FE M
Sbjct: 161 IAMDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKA 220
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KPD TYN + Y+R +V D+ E MM + L+PN TY + + F +
Sbjct: 221 N--IKPDVVTYNILASGYSRNGLVMKVFDILE--HMM---DQGLEPNSLTYGIAIAGFCR 273
Query: 120 YCAVTEAIRHFRALQ-------NYEGGTKV---LHN---------------EGNFGDPLS 154
++EA F ++ N G+ V LH+ +GN D LS
Sbjct: 274 GGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLS 333
Query: 155 L--YLRALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIE 203
+ LCR+ ++ E + M + N V P + Y L+S++ +
Sbjct: 334 CSKLINGLCRDEKVGEASTVCKMMLEKN--VVPDVI----SYSKLISAYCQ 378
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAG AL+I EM+ T+F ++ L+ E A TF ME ++ +K
Sbjct: 205 CKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGME--KNGVKA 262
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D YN +I A+ + + ++V +L M D+K +QPN +T +++ E
Sbjct: 263 DVAAYNALIGAFCKVNKF---KNVYRVLNEM--DYKGMQPNSRTLNIILNNLIARGETDE 317
Query: 126 AIRHFRAL 133
A R FR +
Sbjct: 318 AFRVFRRM 325
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ +AG +A +A M+ AG T +N L++ A+ + M+ E
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK--E 416
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++PD TYN ++ +A + V ELLG M++D QP+V T+ LV + K
Sbjct: 417 VGIRPDVCTYNTLLSGSCKAGDFAAVD---ELLGKMIDDG--CQPSVITFGTLVHGYCKV 471
Query: 121 CAVTEAIRHFRALQNYEGG---TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+ EA+R R++ E G V++N + LC+ G + +E + M
Sbjct: 472 GKIDEALRILRSMD--ESGIHPNNVIYNT---------LIDFLCKRGDVDLAIELFDEMK 520
Query: 178 KDNQP 182
+ + P
Sbjct: 521 EKSVP 525
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG AL + EM G +N LLS G E A M +K D
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM--ASVGIKKD 478
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN ++ Y + YD V+ V M +H + PN+ TY+ L++ ++K EA
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKV---FTEMKREH--VLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 127 IRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ FR ++ G + VL+ S + ALC+ G + + ++ M K+
Sbjct: 534 MEIFREFKS--AGLRADVVLY---------SALIDALCKNGLVGSAVSLIDEMTKE 578
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
EM+ G FN LL+ + G+ E A F+ M ++ D +YN ++ A +
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT--NRRIEQDVFSYNTLLDAICK 386
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGG 139
D E+L M KR+ PNV +Y+ +++ F K EA+ F ++ Y G
Sbjct: 387 GGQMDLA---FEILAQM--PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR-YLG- 439
Query: 140 TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+ + ++ LS+Y + GR E L+ L MA
Sbjct: 440 --IALDRVSYNTLLSIYTKV----GRSEEALDILREMA 471
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M AG T F +N ++ C G E A FE M++ + PDT TYN +I Y +
Sbjct: 123 DMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRG--LIPDTVTYNSMIDGYGK 180
Query: 80 AESY-DRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
D V E+ M E P+V TY L+ CF K + + + +R ++
Sbjct: 181 VGRLDDTVYFFEEMKSMSCE------PDVITYNSLINCFCKSGKLPKGLEFYREMK 230
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ +AG +A +A M+ AG T +N L++ A+ + M+ E
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK--E 416
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++PD TYN ++ +A + V ELLG M++D QP+V T+ LV + K
Sbjct: 417 VGIRPDVCTYNTLLSGSCKAGDFAAVD---ELLGKMIDDG--CQPSVITFGTLVHGYCKV 471
Query: 121 CAVTEAIRHFRALQNYEGG---TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+ EA+R R++ E G V++N + LC+ G + +E + M
Sbjct: 472 GKIDEALRILRSMD--ESGIHPNNVIYNT---------LIDFLCKRGDVDLAIELFDEMK 520
Query: 178 KDNQP 182
+ + P
Sbjct: 521 EKSVP 525
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + ++E G T FN +++ + G + A FE M+ E KP T+N +I
Sbjct: 397 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK--ESGCKPTASTFNTLI 454
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ Y + ++++ + LL MM+ D + LQPN +T +LV+ + + EA +Q
Sbjct: 455 KGYGKI---GKLEESSRLLDMMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 510
Query: 135 NY 136
+Y
Sbjct: 511 SY 512
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 40 QATCG---IPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMM 96
QA C I E ++ YG +KPD T+N + +AY R S +D+ ++ M
Sbjct: 491 QAWCNQRKIEEAWNIVYKMQSYG---VKPDVVTFNTLAKAYARIGSTCTAEDM--IIPRM 545
Query: 97 VEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ H +++PNV+T +V + + + EA+R F ++
Sbjct: 546 L--HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMK 581
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEV--AFATFENMEYGEDYM 63
CK GD A + +MEAA A FN ++ + C V A F+ ME +
Sbjct: 160 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTII--DSLCKYRHVDDALNLFKEME--TKGI 215
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
+P+ TY+ +I SY R D ++LL M+E K++ PN+ T+ L++ F K
Sbjct: 216 RPNVVTYSSLISCLC---SYGRWSDASQLLSDMIE--KKINPNLVTFNALIDAFVKEGKF 270
Query: 124 TEA 126
EA
Sbjct: 271 VEA 273
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G+ A ++ YEM G +F ++ L+ G+ A F ME
Sbjct: 417 VITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN 476
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
KPDTE YN +I ++ D DV E++ K PN TY +LVE
Sbjct: 477 ---KPDTENYNSLILGCCKSRRTDLALDVFEIM-----VGKGYLPNETTYTILVE 523
>gi|224137224|ref|XP_002322504.1| predicted protein [Populus trichocarpa]
gi|222867134|gb|EEF04265.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 569 VIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGE 628
+I+ G +P+ A ++RA RA +KI ++ LY+ I+++C DLG
Sbjct: 289 IIDSGLSPSYATYAALLRAYGRARYGEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGF 348
Query: 629 LDAAVAIVADMETTGIAVPDQTLDRVIT-SRQTGETS 664
+D A+ I DM+ +GI+ T +IT S G+ S
Sbjct: 349 VDEAIEIFEDMKNSGISPDSWTFSSMITMSSCCGKVS 385
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGR-MATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
++ CK+GD +ALE+ +EM+ + R ++ L+ G + A FE M
Sbjct: 205 LVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEM-VS 263
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+D + PD TY+ +I+ + DR + + E + D PNV Y++L+ F K
Sbjct: 264 KDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCD-----PNVFNYSVLMNGFCK 318
Query: 120 YCAVTEAIRHFRALQNYE------GGTKVLHNEGNFGD---------------------P 152
+ EA F +++ G T +++ G
Sbjct: 319 EGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVT 378
Query: 153 LSLYLRALCREGRIIELLEALEAMA 177
++ L+ LCREGR E L LE +A
Sbjct: 379 FNVLLKGLCREGRFDEALRMLENLA 403
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G + TF +N L+S G + A FE +E DY KPDT +YN +I +
Sbjct: 478 KMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELE-DSDY-KPDTCSYNSLINCLGK 535
Query: 80 A----ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
E++ + +++ E K L P+V TY+ L+ECF K V A R F
Sbjct: 536 NGHLDEAHMKFKEMCE---------KGLNPDVVTYSTLIECFGKTDKVEMACRLF 581
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ +AG A++I E+E + T +N L++C G + A F+ M E
Sbjct: 494 LISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEM--CE 551
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ +I+ + + D+V+ L M+ + PN+ TY +L++C +
Sbjct: 552 KGLNPDVVTYSTLIECFGKT---DKVEMACRLFDEMLAEG--CYPNIVTYNILLDCLERS 606
Query: 121 CAVTEAIRHFRALQ 134
EA+ + L+
Sbjct: 607 GRTAEAVDLYAKLK 620
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + ++E G T FN +++ + G + A FE M+ E KP T+N +I
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK--ESGCKPTASTFNTLI 431
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ Y + ++++ + LL MM+ D + LQPN +T +LV+ + + EA +Q
Sbjct: 432 KGYGK---IGKLEESSRLLDMMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 487
Query: 135 NY 136
+Y
Sbjct: 488 SY 489
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 40 QATCG---IPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMM 96
QA C I E ++ YG +KPD T+N + +AY R S +D+ ++ M
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYG---VKPDVVTFNTLAKAYARIGSTCTAEDM--IIPRM 522
Query: 97 VEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ H +++PNV+T +V + + + EA+R F ++
Sbjct: 523 L--HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMK 558
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + ++E G T FN +++ + G + A FE M+ E KP T+N +I
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK--ESGCKPTASTFNTLI 431
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ Y + ++++ + LL MM+ D + LQPN +T +LV+ + + EA +Q
Sbjct: 432 KGYGK---IGKLEESSRLLDMMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 487
Query: 135 NY 136
+Y
Sbjct: 488 SY 489
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 40 QATCG---IPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMM 96
QA C I E ++ YG +KPD T+N + +AY R S +D+ ++ M
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYG---VKPDVVTFNTLAKAYARIGSTCTAEDM--IIPRM 522
Query: 97 VEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ H +++PNV+T +V + + + EA+R F ++
Sbjct: 523 L--HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMK 558
>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
CCMP2712]
Length = 363
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
+AG+ S ALE+ ME AG + ++ A G + E M+ D ++PD
Sbjct: 250 RAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERMK--ADKLRPD 307
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
YN VI A +R +D LL M+ ED QPN+ TY +++
Sbjct: 308 AVAYNFVISALSRGGQWDAGLT---LLQMLEEDEA--QPNISTYCTVIK 351
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G H A E+ EMEAAG +N L++ A G+ + A A +++ + PD
Sbjct: 192 KGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLL--SKGLCPD 249
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHK-RLQPNVKTYALLVECFTKYCAVTE 125
TY +I A+ RAE Y++ L E K PN+ TY +L++ + + + +
Sbjct: 250 EFTYCTLISAFNRAERYEKA------LETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDD 303
Query: 126 AIRHFRALQ 134
++ F+ +Q
Sbjct: 304 MMKVFKFMQ 312
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 33 FNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAEL 92
FN ++S A G E A E + + +KPD TYNC++ Y R Y + ++V
Sbjct: 499 FNAMISMCAKRGWIERAVKLLEEIRKAQ--LKPDGVTYNCLMSMYGREGMYHKAEEV--- 553
Query: 93 LGMMVEDHKRL--QPNVKTYALLVECFTKYCAVTEAIRHF 130
+ + +R PN+ TY L+ +TK+ + +A R F
Sbjct: 554 ----MSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVF 589
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
+++ G +A TF +N LL GI A + + ME ++ PD TYN ++ AY RA
Sbjct: 306 LKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEME--KNNCPPDLVTYNELVAAYVRA 363
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ ++ A+ + M+ K + PN TY ++ + K +A+ FR ++
Sbjct: 364 GFH---EEGADFIDTMIR--KGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK 412
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI +G A++I +M+ G TT +N L+ G P + E M E
Sbjct: 136 MINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDE 195
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ +KP+ TYN +IQA+ + ++++ +L MV +QP+V TY + + +
Sbjct: 196 N-VKPNDRTYNILIQAWC---TKKKLEEAWNVLHKMVASG--IQPDVVTYNTMARAYAQN 249
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+A R +Q KV NE G +S Y C+EG + E L L M
Sbjct: 250 GETEKAERLILKMQY----NKVKPNERTCGIIISGY----CKEGNMTEALRFLYRM 297
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHL----LSCQATCGIPEVAFATFENM 56
+I+ CK G+ + AL Y M+ G FN L L T G+ E A E
Sbjct: 277 IISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDE-ALTLME-- 333
Query: 57 EYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVEC 116
E+G +KPD T++ ++ A++ A D + E+ MV+ ++P++ Y++L +
Sbjct: 334 EFG---IKPDVVTFSTIMNAWSSAGLMDNCE---EIFNDMVK--AGIEPDIHAYSILAKG 385
Query: 117 FTK 119
+ +
Sbjct: 386 YVR 388
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK G+ NA + +EM G T+ F L+S C +A A E E
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALIS--GLCHANRMAEANKLFGEMVE 523
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ P+ TYN +I+ + + + R ELL MVE K L P+ TY L+
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVR---AFELLDEMVE--KGLVPDTYTYRPLISGLCST 578
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
V+EA R N G + NE F S L C+EGR+ + L+A M
Sbjct: 579 GRVSEA----REFMNDLQGEQQKLNEMCF----SALLHGYCKEGRLDDALDACREM 626
>gi|224089785|ref|XP_002308813.1| predicted protein [Populus trichocarpa]
gi|222854789|gb|EEE92336.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 557 WEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLY 616
W+V+ Q +I+ G +P+ A ++ A RA KI ++ G LY
Sbjct: 66 WQVKKFYQ---DIIDNGLSPSFVTFAALLHAYGRARYGDDAFKIYREMKEKGLGLNVVLY 122
Query: 617 DEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDRVIT 656
+ I+++C DLG +D AV I DM+++GI T +IT
Sbjct: 123 NSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMIT 162
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 13 NALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNC 72
+A +I EM+ G +N +L+ A G + A FE+M+ +KPD+ T++
Sbjct: 102 DAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMK--SSGIKPDSWTFSS 159
Query: 73 VIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
+I ++ +V +V L M E QPN+ L++C+ K + + ++ F
Sbjct: 160 MITIFSCC---GKVSEVENTLNEMFE--AGFQPNIFILTSLIQCYGKAQRIDDVVKTF 212
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 17 IAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQA 76
I ++E G + FN +++ + G E A TF M+ E+ MKP T TYN +I+
Sbjct: 70 IISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQ--ENGMKPTTSTYNTLIKG 127
Query: 77 YTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
Y A + ++ +LL +M ++ ++PN++TY +LV + +TEA
Sbjct: 128 YGIA---GKPEESVKLLELMSQEGN-VKPNLRTYNVLVRAWCNKKRITEA 173
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
+++ G +A TF +N LL GI A + + ME ++ PD TYN ++ AY RA
Sbjct: 306 LKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEME--KNNCPPDLVTYNELVAAYVRA 363
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ ++ A+ + M+ K + PN TY ++ + K +A+ FR ++
Sbjct: 364 GFH---EEGADFIDTMIR--KGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK 412
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 31 FHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVA 90
F FN L++ A PE F NM+ + PD TY +IQ ++R+ + ++
Sbjct: 134 FSFNALIAAYAMSRKPERGLQVFSNMKAAG--VLPDIVTYTTLIQMFSRSSMH---KEAI 188
Query: 91 ELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
E+ MV + + QP+ Y+LLV + K V +A+ F LQ
Sbjct: 189 EMFEEMVVN--KCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQ 230
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YGEDYMKP 65
KAG ++AL I + ++ G + L+S G+ E + F ME YG +
Sbjct: 215 KAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYG---CRA 271
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D N +I AY +A V D A LL + + + PN +YA++VE F V E
Sbjct: 272 DVHLLNTMIDAYAKA---GMVNDAANLLHRLTA--QGVCPNRASYAIIVEGFLHAGHVEE 326
Query: 126 AIRHFRALQN 135
A+ + ++
Sbjct: 327 ALAAYASMSG 336
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 23/129 (17%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK- 64
C+ GD + A+ ME+ G + FN L+ F + M+ E+++K
Sbjct: 397 CRIGDMNKAILTIERMESFGLRPNSITFNSLID----------KFCDMKEMDKAEEWVKK 446
Query: 65 -------PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
P ETYN +I Y + ++DR + E + + ++PNV +Y L+ C
Sbjct: 447 MAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM-----EEIGVKPNVVSYGSLINCL 501
Query: 118 TKYCAVTEA 126
K + EA
Sbjct: 502 CKDGKILEA 510
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEV--AFATFENMEYGEDYM 63
CK GD A + +MEAA A FN ++ + C V A F+ ME +
Sbjct: 161 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTII--DSLCKYRHVDDALNLFKEME--TKGI 216
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
+P+ TY+ +I SY R D ++LL M+E K++ PN+ T+ L++ F K
Sbjct: 217 RPNVVTYSSLISCLC---SYGRWSDASQLLSDMIE--KKINPNLVTFNALIDAFVKEGKF 271
Query: 124 TEA 126
EA
Sbjct: 272 VEA 274
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 52/257 (20%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAG-RMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
++ C+ GD +A E+ EM + ++ L+ G + AF FE M
Sbjct: 279 LVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEM-VS 337
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELL-------------------------- 93
+D + PD TYN +I + R DR ++V E +
Sbjct: 338 KDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQ 397
Query: 94 ---GMMVE-DHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNF 149
G++ E L+P+ TY L+ F++ + EAI ++ + +
Sbjct: 398 DAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTV------ 451
Query: 150 GDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRAMILSR-KYRTLVSSWIEPLQEE 208
++ L LCREGR E L+ +E + P + + L++ YR +++S L +
Sbjct: 452 --TFNVILGGLCREGRFDEALDMIEKL-------PQQGVYLNKGSYRIVLNS----LTQN 498
Query: 209 AELGYEIDYIARYISEG 225
EL + +S G
Sbjct: 499 CELRKANKLLGLMLSRG 515
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 27/186 (14%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAG-RMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
++ CK GD +A E+ EM+ + ++ L++ G + A FE M
Sbjct: 206 LVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEM-VS 264
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+D + PD TYN +I + E DR + E + PNV Y+ L+ F K
Sbjct: 265 KDQILPDALTYNALINGFCHGEKVDRALKIMEFM-----KKNGCNPNVFNYSALMNGFCK 319
Query: 120 YCAVTEAIRHFRALQNYE------GGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEAL 173
+ EA F +++ G T ++ NF CR GR+ E +E L
Sbjct: 320 EGRLEEAKEVFDEMKSLGLKPDTVGYTTLI----NF----------FCRAGRVDEAMELL 365
Query: 174 EAMAKD 179
+ M ++
Sbjct: 366 KDMREN 371
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 71/180 (39%), Gaps = 24/180 (13%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMAT--TFHFNHLLSCQATCGIPEVAFATFENMEYGEDYM 63
CKAG +AL Y AG T FN L+ G E AF FE+M +
Sbjct: 76 CKAGRFGDAL--GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCL 133
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
P+ TY VI + DR ELL +M E PNV TY++LVE C
Sbjct: 134 -PNVVTYTTVINGLCKDGKLDRA---IELLDLMNETG--CCPNVITYSVLVE---GLCKA 184
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLY---LRALCREGRIIELLEALEAMAKDN 180
+ F LQ F + +Y L LC+ R+ E LE ++ M +
Sbjct: 185 GRTDKGFTLLQEM--------TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 71/180 (39%), Gaps = 24/180 (13%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMAT--TFHFNHLLSCQATCGIPEVAFATFENMEYGEDYM 63
CKAG +AL Y AG T FN L+ G E AF FE+M +
Sbjct: 76 CKAGRFGDAL--GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCL 133
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
P+ TY VI + DR ELL +M E PNV TY++LVE C
Sbjct: 134 -PNVVTYTTVINGLCKDGKLDRA---IELLDLMNETG--CCPNVITYSVLVE---GLCKA 184
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLY---LRALCREGRIIELLEALEAMAKDN 180
+ F LQ F + +Y L LC+ R+ E LE ++ M +
Sbjct: 185 GRTDKGFTLLQEM--------TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 31 FHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVA 90
F FN L++ A PE F NM+ + PD TY +IQ ++R+ + ++
Sbjct: 134 FSFNALIAAYAMSRKPERGLQVFSNMKAAG--VLPDIVTYTTLIQMFSRSAMH---KEAI 188
Query: 91 ELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
E+ MV + + QP+ Y+LLV + K V +A+ F LQ
Sbjct: 189 EMFEEMVVN--KCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQ 230
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YGEDYMKP 65
KAG ++AL I + ++ G + L+S G+ E + F ME YG +
Sbjct: 215 KAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYG---CRA 271
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D N +I AY +A V D A LL + + + PN +YA++VE F V E
Sbjct: 272 DVHLLNTMIDAYAKA---GMVNDAANLLHRLTA--QGVCPNRASYAIIVEGFLHAGHVDE 326
Query: 126 AIRHFRALQNYEGGTK 141
A+ + ++ E G K
Sbjct: 327 ALAAYASMS--EAGFK 340
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 5 DC--KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDY 62
DC KAG A E+ +M+ G A T +N L++ G + A A ME E+
Sbjct: 315 DCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEME--ENG 372
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR-LQPNVKTYALLVECFTKYC 121
P+ TYN +I SY + +++ + +E +R + PNV +Y+ L+E F K
Sbjct: 373 CAPNIITYNTLI------SSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAG 426
Query: 122 AVTEAIRHFRALQ---------NYEGGTKVLHNEGNFGDPLSLYLR----ALCREGRIIE 168
AI FR ++ Y L G FG + YLR A C+ G++ +
Sbjct: 427 RTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAME-YLREMRDAGCQMGKVTK 485
Query: 169 LL 170
L
Sbjct: 486 SL 487
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
+GD AL + +M + G +N L+SC G+ + A +M G +P+
Sbjct: 338 SGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGR--FQPNI 395
Query: 68 ETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
+Y V+ +A R+ D E+L M+E+ QPN TY LL+E
Sbjct: 396 VSYKTVLLGLCKAH---RIDDAIEVLAAMIENG--CQPNETTYTLLIE 438
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 37/259 (14%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA C+ G A+E M G + ++N +++ G + A F ++ E
Sbjct: 261 LIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLD--E 318
Query: 61 DYMKPDTETYNCVIQA-YTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
P+ +YN ++ A ++ + Y + ++++L K + P+V TY L+ C +
Sbjct: 319 VGCPPNVSSYNTMLSALWSSGDRYRALGMISQML------SKGIDPDVITYNSLISCLCR 372
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLY---LRALCREGRIIELLEALEAM 176
V EAI + + G F + Y L LC+ RI + +E L AM
Sbjct: 373 DGMVDEAIGLLADMLS-----------GRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAM 421
Query: 177 AKDN-QPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERKRWV 235
++ QP +L + + EL + YI ISE K +
Sbjct: 422 IENGCQPNETTYTLLIEGI-----GFSGSRTQAMELANSL-YIMNAISEDSFKRLNKTF- 474
Query: 236 PRRGKTPLDPDAVGFIYSN 254
PL GFIYSN
Sbjct: 475 ------PLLDVYKGFIYSN 487
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 17/172 (9%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G AL++ EM + G TF +N + G + AF + KPD
Sbjct: 129 GGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLN--SRGCKPDVI 186
Query: 69 TYNCVIQAYTRAESYDRVQD-VAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAI 127
TYN +++A +D + ++E+ + +PNV TY++L+ + + E++
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIF------SRGCEPNVVTYSILISSLCRDGKIEESV 240
Query: 128 RHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ ++ K L + DPL + A CREG++ +E L+ M D
Sbjct: 241 NLVKVMKE-----KGLTPDAYCYDPL---IAAFCREGKLDMAIEFLDCMICD 284
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 36/161 (22%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD + A + EM G + L+ T G E FA FE M G ++P
Sbjct: 49 CKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGG--VEP 106
Query: 66 DTETYNCVIQAYTRAESYDRVQ--------------------------------DVAELL 93
+ TYNC+I + R ++R + D A+LL
Sbjct: 107 NLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLL 166
Query: 94 GMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
MM + R P++ T+ LLV+ + K ++ A+ F ++
Sbjct: 167 DMMRTEGTR--PSIITFNLLVDGYGKAGKMSNALPFFNQMK 205
>gi|357116849|ref|XP_003560189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Brachypodium distachyon]
Length = 737
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C G AL I EME G + T +N +++ C E A F M+ E
Sbjct: 360 LIKMFCDEGLKKEALIIQSEMERRGIPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMK--E 417
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQ-DVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP TYN ++ AY+R R+Q +V E L + + D LQPN ++Y L+ + +
Sbjct: 418 KGLKPTIVTYNILMDAYSR-----RLQPEVVESLLLEMHDLG-LQPNARSYNCLISAYGR 471
Query: 120 YCAVTE 125
++E
Sbjct: 472 QKKMSE 477
>gi|295830913|gb|ADG39125.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + ++E G T FN +++ + G + A FE M+ E KP T T+N +I
Sbjct: 30 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK--ESGCKPTTSTFNTLI 87
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ Y + ++++ + LL +M+ D + LQPN +T +LV+ + + EA +Q
Sbjct: 88 KGYGK---JGKLEESSRLLELMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 143
Query: 135 NY 136
+Y
Sbjct: 144 SY 145
>gi|295830915|gb|ADG39126.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + ++E G T FN +++ + G + A FE M+ E KP T T+N +I
Sbjct: 30 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK--ESGCKPTTSTFNTLI 87
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ Y + ++++ + LL +M+ D + LQPN +T +LV+ + + EA +Q
Sbjct: 88 KGYGKI---GKLEESSRLLELMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 143
Query: 135 NY 136
+Y
Sbjct: 144 SY 145
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 65/161 (40%), Gaps = 17/161 (10%)
Query: 6 CKAGD-HSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK 64
CK G H A ++ EM+AAG +N LL P+ A M +
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVL--NGFS 346
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P TYN +I AY R D + EL M E K +P+V TY L+ F + V
Sbjct: 347 PSIVTYNSLISAYARDGMLD---EAMELKNQMAE--KGTKPDVFTYTTLLSGFERAGKVE 401
Query: 125 EAIRHFRALQN---------YEGGTKVLHNEGNFGDPLSLY 156
A+ F ++N + K+ N G F + + ++
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
EM+ AG + FN L+S + CG E A + M + + PD TYN V+ A R
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML--DAGVTPDLSTYNTVLAALAR 536
Query: 80 AESYDRVQDV-AELLGMMVEDHKRLQPNVKTYALLVECF 117
+++ + V AE+ ED R +PN TY L+ +
Sbjct: 537 GGMWEQSEKVLAEM-----ED-GRCKPNELTYCSLLHAY 569
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 13 NALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNC 72
+AL + EM+ G + +N LL+ A G E A A FE+M+ + M PD+ T++
Sbjct: 369 DALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCM-PDSWTFSS 427
Query: 73 VIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
+I Y+ + +V + +L M+E +PN+ L++C+ K E +R F
Sbjct: 428 LITIYSCS---GKVSEAEAMLNAMLE--AGFEPNIFVLTSLIQCYGKANRTDEVVRTF 480
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 573 GGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAA 632
G P+ G A ++RA RA L + ++ G LY+ ++++C D+G + A
Sbjct: 346 GLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEA 405
Query: 633 VAIVADMETTGIAVPDQ-TLDRVIT 656
AI DM+++G +PD T +IT
Sbjct: 406 AAIFEDMKSSGNCMPDSWTFSSLIT 430
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM A TF +N L+ A G A + M+ G +KP
Sbjct: 702 CKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGG--VKP 759
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TY I A +A R + E + + ++PNVKTY L+ + + +
Sbjct: 760 DIHTYTSFINACCKAGDMLRASKMMEEM-----ETSGVKPNVKTYTTLIHGWARASLPEK 814
Query: 126 AIRHFRALQ 134
A+R F+ ++
Sbjct: 815 ALRCFQEMK 823
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAGD A ++ EME +G + L+ A +PE A F+ M+ +KP
Sbjct: 772 CKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAG--LKP 829
Query: 66 DTETYNCVIQAY----TRAESYDR 85
D Y+C++ A T E+Y R
Sbjct: 830 DKAVYHCLMTALLSRATVTEAYVR 853
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G S ALE++ ME+AG ++ L++ AFA FE++ +D +KPD
Sbjct: 493 KVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVV--KDGLKPD 550
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHK-RLQPNVKTYALLVECFTKYCAVTE 125
YN +I+A+ + DR + M+ E K R +P +T+ ++ F + +
Sbjct: 551 VVLYNNIIRAFCGMGTMDRA------ICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKR 604
Query: 126 AIRHF 130
A+ F
Sbjct: 605 ALDVF 609
>gi|115465970|ref|NP_001056584.1| Os06g0111300 [Oryza sativa Japonica Group]
gi|113594624|dbj|BAF18498.1| Os06g0111300 [Oryza sativa Japonica Group]
Length = 978
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M++ KAG H A + M+ G FN +++ AT G+ A F+ M+ +
Sbjct: 757 MLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQ--K 814
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD+ TY +I+AYT + Y + + E + MM+ + + P+ + L+ F K
Sbjct: 815 NNHVPDSHTYLALIRAYTEGKCYSKAE---EAIQMMLRSN--MTPSCTHFNHLISAFLKE 869
Query: 121 CAVTEAIRHFRALQNYEGGTKV----------LHNEGNFGDPLSLYLRALCR 162
+ EA R + ++ E G +H + + D L+ CR
Sbjct: 870 GQIDEAQRMYNQME--EAGIPADLACCRTMMRMHLDHGYVDDGILFFETACR 919
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
EM A+G + +N LL A C E A + F++M G+D +PD +Y ++ AY
Sbjct: 305 EMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSM--GQDRCRPDIRSYTTLLAAYAN 362
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ + + LL M L+PNV TY L++ +T + ++ F LQ
Sbjct: 363 TGNMKKAE---RLLKRM--KQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQ 412
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ KAG S + +M+ AG T FN L++ Q T E A +M+ +
Sbjct: 219 MLHTYGKAGKFSEQQALFRQMKGAGVPMTVVTFNSLMAFQKTVADAE---ACLRHMQAAK 275
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KPD TY +I AY++A RV++ + MV L+P+ Y L++ + K
Sbjct: 276 --IKPDVITYTGLINAYSKAR---RVEEAHVVFREMVASG--LRPSRIAYNTLLDAYAKC 328
Query: 121 CAVTEAIRHFRAL 133
V A F+++
Sbjct: 329 KEVEGAESLFKSM 341
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK G + EI + M+ R + ++ L+ CG + AT E E
Sbjct: 236 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLI--HGLCGSGNLDGATRVYKEMAE 293
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ + PD YN ++ Y RA R+++ EL +M ++ R V +Y +L+ +
Sbjct: 294 NGVSPDVVVYNTMLNGYLRA---GRIEECLELWKVMEKEGCR---TVVSYNILIRGLFEN 347
Query: 121 CAVTEAIRHFRAL---------QNYEGGTKVLHNEGNFGDPLSLY--------------- 156
V EAI + L Y L G LS+
Sbjct: 348 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 407
Query: 157 ---LRALCREGRIIELLEALEAMAKDN-QPVP 184
+ LCREGR+ E+ L+ M K +P P
Sbjct: 408 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 439
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 34/210 (16%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
++ C+ G A + M+ G T +N L+S A G + A E+M YG
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308
Query: 60 EDYMKPDTETYNCVIQAYTRAESYD---RVQDVAELLGMMVEDHKRLQPNVKTYALLVE- 115
+PD TYN + +A D R++D E LG + P+V TY LV+
Sbjct: 309 ---FEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTAL-------PDVVTYNTLVDA 358
Query: 116 CFTKYCAVTEAIRHFRALQNYEG--GTKVLHNEGNFGDPLSLYLRALCREGRIIELLEAL 173
CF C+ ++A+R +++ +G T V HN + +++LC+EG++ E L L
Sbjct: 359 CFKWRCS-SDALRLLEEMRD-KGVKPTLVTHN---------IVVKSLCKEGKLEEALGKL 407
Query: 174 EAMAKDNQPVPPRAMILSRKYRTLVSSWIE 203
E +A++ + P + Y TL+ ++ +
Sbjct: 408 EKIAEEG--LAPDVIT----YNTLIDAYCK 431
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 107/266 (40%), Gaps = 47/266 (17%)
Query: 37 LSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMM 96
LS A +P +A ++ ++P + N V+ A +R+ S Q ++ +
Sbjct: 142 LSAYARLRLPHLAAQLLHSLRRRRG-VRPSLQAANAVLSALSRSPS-TLPQASLDVFRSL 199
Query: 97 VEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYE-GGTKVLHNEGNFGDPLSL 155
+E RL PN T+ LLV + +A+ +Q + V +N
Sbjct: 200 IE--LRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNT--------- 248
Query: 156 YLRALCREGRIIELLEALEAMAKDN-QPVPPRAMILSRKYRTLVSS-----WIEPLQEEA 209
L A CR+G + E L M +D P P Y TLVS+ WI+ +
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQP-------TYNTLVSAFARLGWIKQATKVV 301
Query: 210 E----LGYEIDY-----IARYISEGGLTGERKRW---VPRRGKTPLDPDAVGFIYSNPME 257
E G+E D +A + + G E R + R G T L PD V Y+ ++
Sbjct: 302 ESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG-TAL-PDVV--TYNTLVD 357
Query: 258 TSFKQRCLEDGKKYHRKLLRTLQNEG 283
FK RC D +LL ++++G
Sbjct: 358 ACFKWRCSSDA----LRLLEEMRDKG 379
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 36/161 (22%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD + A + EM G + L+ T G E FA FE M G ++P
Sbjct: 49 CKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGG--VEP 106
Query: 66 DTETYNCVIQAYTRAESYDRVQ--------------------------------DVAELL 93
+ TYNC+I + R ++R + D A+LL
Sbjct: 107 NLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLL 166
Query: 94 GMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
MM + R P++ T+ LLV+ + K ++ A+ F ++
Sbjct: 167 DMMRTEGTR--PSIITFNLLVDGYGKAGKMSNALPFFNQMK 205
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ CK G A+ + +M + G TTF ++ L+ E A ATF +ME +
Sbjct: 248 MVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDME--K 305
Query: 61 DYMKPDTETYNCVIQAYTRAESYD---RVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
D + PD YN ++ A+ + + +D RV D E G + PN +T+ +++
Sbjct: 306 DGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHG--------ISPNSRTWNIILNTL 357
Query: 118 TKYCAVTEAIRHFRAL 133
EA R FR +
Sbjct: 358 ISLGKDDEAYRVFRNM 373
>gi|295830911|gb|ADG39124.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + ++E G T FN +++ + G + A FE M+ E KP T T+N +I
Sbjct: 30 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK--ESGCKPTTSTFNTLI 87
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ Y + ++++ + LL +M+ D + LQPN +T +LV+ + + EA +Q
Sbjct: 88 KGYGKI---GKLEESSRLLELMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 143
Query: 135 NY 136
+Y
Sbjct: 144 SY 145
>gi|295830909|gb|ADG39123.1| AT5G21222-like protein [Capsella grandiflora]
gi|295830919|gb|ADG39128.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + ++E G T FN +++ + G + A FE M+ E KP T T+N +I
Sbjct: 30 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK--ESGCKPTTSTFNTLI 87
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ Y + ++++ + LL +M+ D + LQPN +T +LV+ + + EA +Q
Sbjct: 88 KGYGK---JGKLEESSRLLELMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 143
Query: 135 NY 136
+Y
Sbjct: 144 SY 145
>gi|218197431|gb|EEC79858.1| hypothetical protein OsI_21342 [Oryza sativa Indica Group]
Length = 1013
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M++ KAG H A + M+ G FN +++ AT G+ A F+ M+ +
Sbjct: 792 MLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQ--K 849
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD+ TY +I+AYT + Y + + E + MM+ + + P+ + L+ F K
Sbjct: 850 NNHVPDSHTYLALIRAYTEGKCYSKAE---EAIQMMLRSN--MTPSCTHFNHLISAFLKE 904
Query: 121 CAVTEAIRHFRALQNYEGGTKV----------LHNEGNFGDPLSLYLRALCR 162
+ EA R + ++ E G +H + + D L+ CR
Sbjct: 905 GQIDEAQRMYNQME--EAGIPADLACCRTMMRMHLDHGYVDDGILFFETACR 954
>gi|345293243|gb|AEN83113.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293245|gb|AEN83114.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293247|gb|AEN83115.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293249|gb|AEN83116.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293251|gb|AEN83117.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293253|gb|AEN83118.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293255|gb|AEN83119.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293257|gb|AEN83120.1| AT5G21222-like protein, partial [Capsella rubella]
Length = 160
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + ++E G T FN +++ + G + A FE M+ E KP T T+N +I
Sbjct: 24 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK--ESGCKPTTSTFNTLI 81
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ Y + ++++ + LL +M+ D + LQPN +T +LV+ + + EA +Q
Sbjct: 82 KGYGKI---GKLEESSRLLELMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 137
Query: 135 NY 136
+Y
Sbjct: 138 SY 139
>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
Length = 701
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 13 NALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNC 72
+AL + EM+ G + +N LL+ A G E A A FE+M+ + M PD+ T++
Sbjct: 369 DALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCM-PDSWTFSS 427
Query: 73 VIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
+I Y+ + +V + +L M+E +PN+ L++C+ K E +R F
Sbjct: 428 LITIYSCS---GKVSEAEAMLNAMLE--AGFEPNIFVLTSLIQCYGKANRTDEVVRTF 480
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 579 GDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIISLCLDLGELDAAVAIVAD 638
G A ++RA RA L + ++ G LY+ ++++C D+G + A AI D
Sbjct: 352 GTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFED 411
Query: 639 METTGIAVPDQ-TLDRVIT 656
M+++G +PD T +IT
Sbjct: 412 MKSSGNCMPDSWTFSSLIT 430
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK G + EI + M+ R + ++ L+ CG + AT E E
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLI--HGLCGSGNLDGATRVYKEMAE 318
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ + PD YN ++ Y RA R+++ EL +M ++ R V +Y +L+ +
Sbjct: 319 NGVSPDVVVYNTMLNGYLRA---GRIEECLELWKVMEKEGCR---TVVSYNILIRGLFEN 372
Query: 121 CAVTEAIRHFRAL---------QNYEGGTKVLHNEGNFGDPLSLY--------------- 156
V EAI + L Y L G LS+
Sbjct: 373 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 432
Query: 157 ---LRALCREGRIIELLEALEAMAKDN-QPVP 184
+ LCREGR+ E+ L+ M K +P P
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464
>gi|295830917|gb|ADG39127.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + ++E G T FN +++ + G + A FE M+ E KP T T+N +I
Sbjct: 30 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK--ESGCKPTTSTFNTLI 87
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ Y + ++++ + LL +M+ D + LQPN +T +LV+ + + EA +Q
Sbjct: 88 KGYGKI---GKLEESSRLLELMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 143
Query: 135 NY 136
+Y
Sbjct: 144 SY 145
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G + A+E + EA+G T + + +++ G A F+ ME E
Sbjct: 171 LINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKME--E 228
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+P+ TYN +I + + + + D+ + KR+ P++ TY L++ +
Sbjct: 229 AGCQPNVVTYNILIDSLCKDKLVNEALDIFSYM-----KAKRISPDIFTYNSLIQGLCNF 283
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
EA AL N ++ N F ++ + A+C+EG++ E + M
Sbjct: 284 RRWKEA----SALLNEMTSLNIMPNIFTF----NVLVDAICKEGKVSEAQGVFKTM 331
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 27/188 (14%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKA A ++ EM G ++N L+ G A F+NM
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ ++ + + E Y + L +M + L+P++ Y +L++ K+
Sbjct: 441 NL--PDLFTYSMLLDGFCK-EGY--LGKAFRLFRVMQSTY--LKPDIAMYNILIDAMCKF 493
Query: 121 CAVTEAIRHFR------ALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALE 174
+ +A + F L N + T +++N LC+EG + E LEA
Sbjct: 494 GNLKDARKLFSELFVQGLLPNVQIYTTIINN--------------LCKEGLLDEALEAFR 539
Query: 175 AMAKDNQP 182
M D P
Sbjct: 540 NMEGDGCP 547
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CKAG +A+ + +M A+G M T +N L++ G A ++ M
Sbjct: 326 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMT--R 383
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD T++ +I Y R D D + M + R+QPNV T+++++ K
Sbjct: 384 LRCPPDVVTFSSLIDGYCRCGQLD---DALRIWSDMAQ--HRIQPNVYTFSIIIHSLCKQ 438
Query: 121 CAVTEAIR 128
EAIR
Sbjct: 439 NRSDEAIR 446
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 76/205 (37%), Gaps = 34/205 (16%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK GD A + +M+ G +N L+ G+ + + FE M++
Sbjct: 138 MIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMG 197
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD TYN +I ++ + + R + + K L+PNV +Y+ L++ K
Sbjct: 198 --CEPDVITYNALINSFCKFKGMLRAFEFFREM-----KDKDLKPNVISYSTLIDALCKE 250
Query: 121 CAVTEAIRHFRALQ---------NYEGGTKVLHNEGNFGDPLSL---------------- 155
+ AI+ F + Y GN G+ L
Sbjct: 251 GMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTY 310
Query: 156 --YLRALCREGRIIELLEALEAMAK 178
L LC EG + E E AM K
Sbjct: 311 TTLLDGLCEEGMMNEAEELFRAMGK 335
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG+ + + +M AG T F +N ++ G A + FE M+ + + PD
Sbjct: 109 KAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMK--KMGLTPD 166
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN +I Y + D + E + M +P+V TY L+ F K+ + A
Sbjct: 167 IVTYNTLIDGYGKIGLLDESVCLFEEMKFM-----GCEPDVITYNALINSFCKFKGMLRA 221
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
FR +++ + V+ S + ALC+EG +
Sbjct: 222 FEFFREMKDKDLKPNVI--------SYSTLIDALCKEGMM 253
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAG NA+ + EM AG + FN LL A G A+ + M ++ P
Sbjct: 522 CKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMR--QEGFTP 579
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
D +Y + A +A + + E + + LQPN++TY +L+ +T
Sbjct: 580 DIHSYTSFVNACCKAGDMQKATETIEEM-----KQQDLQPNLQTYTILIHGWT 627
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 20/180 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKAG+ A + +ME G AT +N L+ A C I F ++
Sbjct: 234 IIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARI 293
Query: 61 DY-MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D + P TY C+I YT+ ++ E M L N TY++LV+ + +
Sbjct: 294 DTGLSPTAVTYGCLINLYTK---LGKMMKALEFCKEMKAQGITLNRN--TYSMLVDGYVQ 348
Query: 120 YCAVTEAIRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
A F + E G + V +N + L+A C+ ++ ++ L M
Sbjct: 349 LGDFANAFSVFEDMS--EAGIEPDWVTYN---------ILLKAFCKSRQMTRAIQLLGRM 397
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 33/204 (16%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+ + A+++ M+ G T + ++ G +A+ T M+ +P
Sbjct: 382 CKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAG--CRP 439
Query: 66 DTETYNCVIQAYTRAESYDR---VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
+ TYN ++ + DR V D EL G +QPN ++Y L++ F +
Sbjct: 440 NATTYNVIMHNLVQLGQIDRAASVIDEMELAG--------VQPNFRSYTTLMQGFA---S 488
Query: 123 VTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLY---LRALCREGRIIELLEALEAMAKD 179
+ E F+ L+ NE P+ Y L+A C+ GR+ + E MA
Sbjct: 489 IGEIGLAFKCLKRV--------NEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFA 540
Query: 180 NQPVPPRAMILSRKYRTLVSSWIE 203
P+ + + TL+ W +
Sbjct: 541 GVPMN------NYIFNTLLDGWAQ 558
>gi|55295905|dbj|BAD67773.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 1013
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M++ KAG H A + M+ G FN +++ AT G+ A F+ M+ +
Sbjct: 792 MLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQ--K 849
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD+ TY +I+AYT + Y + + E + MM+ + + P+ + L+ F K
Sbjct: 850 NNHVPDSHTYLALIRAYTEGKCYSKAE---EAIQMMLRSN--MTPSCTHFNHLISAFLKE 904
Query: 121 CAVTEAIRHFRALQNYEGGTKV----------LHNEGNFGDPLSLYLRALCR 162
+ EA R + ++ E G +H + + D L+ CR
Sbjct: 905 GQIDEAQRMYNQME--EAGIPADLACCRTMMRMHLDHGYVDDGILFFETACR 954
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 15/177 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAG-RMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
I CK+GD +A + EM+ + ++ L+ G + A FE M
Sbjct: 196 FIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEM-VS 254
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+D + PD TYN +I ++ DR + + E + PNV Y+ L+ F K
Sbjct: 255 KDQILPDALTYNVLINGFSCWGKVDRAKKIMEFM-----KSNGCSPNVFNYSALMSGFCK 309
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ EA+ F ++ + G K + G ++ + CR GRI E + LE M
Sbjct: 310 EGRLEEAMDAFEEMKIF--GLK----QDTVG--YTILINYFCRFGRIDEAMALLEEM 358
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
+GD AL + EM + G +N ++SC G+ + AF +M E P
Sbjct: 447 SGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCE--FHPSV 504
Query: 68 ETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
TYN V+ + +A R++D ++L MV + R PN TY +L+E
Sbjct: 505 VTYNIVLLGFCKAH---RIEDAIDVLDSMVGNGCR--PNETTYTVLIE 547
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL++ EM + G F +N ++ G+ + AF N+E +PD +YN +
Sbjct: 243 ALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKG--CEPDVISYNIL 300
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
++A ++ + +L+ M + + PNV TY++L+ + + EA+ + +
Sbjct: 301 LRALLNQGKWEEGE---KLMTKMFSE--KCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 355
Query: 134 QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ K L + DPL + A CREGR+ +E LE M D
Sbjct: 356 KE-----KGLTPDAYSYDPL---IAAFCREGRLDVAIEFLETMISD 393
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A E E+++ G T +N LL G+ A + + ME E+ D+ TYN +
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME--ENSCPADSVTYNEL 357
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
+ AY RA V E++ K + PN TY +++ + K EA++ F ++
Sbjct: 358 VAAYVRAGFSKEAAGVIEMM-----TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 134 QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRA 187
+ E G + N + LSL L ++ R E+++ L M K N P RA
Sbjct: 413 K--EAG--CVPNTCTYNAVLSL----LGKKSRSNEMIKMLCDM-KSNGCSPNRA 457
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA + G+ A+ I E+E + +N L++C G + A F+ M+ E
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ--E 540
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ +++ + + E RV+ L M+ K QPN+ TY +L++C K
Sbjct: 541 KGLNPDVVTYSTLMECFGKTE---RVEMAYSLFEEMLV--KGCQPNIVTYNILLDCLEKN 595
Query: 121 CAVTEAI 127
EA+
Sbjct: 596 GRTAEAV 602
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ C AG A+E+ ++ G + T +N + S FE M+ +
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK--K 470
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D PD TYN +I ++ R D ++ E L + +P++ +Y L+ C K
Sbjct: 471 DGPSPDIFTYNILIASFGRVGEVDEAINIFEEL-----ERSDCKPDIISYNSLINCLGKN 525
Query: 121 CAVTEAIRHFRALQ 134
V EA F+ +Q
Sbjct: 526 GDVDEAHVRFKEMQ 539
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMA--TTFHFNHLLSCQATCGIPEVAFATFENMEY 58
++ C+ GD A E+ EM++A R++ ++ L+ G + A FE M
Sbjct: 196 LVKHHCRNGDLQAAFEVVKEMKSA-RVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEM-V 253
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
+D + PD TYN +I + + DR + + E + PNV Y++L+ +
Sbjct: 254 SKDNILPDALTYNILINGFCQRGKVDRARTILEFM-----KSNGCSPNVFNYSVLMNGYC 308
Query: 119 KYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAM 176
K + EA F +++ G D +S + LCR GR+ E E L+ M
Sbjct: 309 KEGRLQEAKEVFNEIKSL----------GMKPDTISYTTLINCLCRTGRVDEATELLQQM 358
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 32/142 (22%)
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
KPD TYN +++ Y E+ V + EL MV+ + L+P+V Y +L++ + K V
Sbjct: 297 KPDIVTYNALMEGYCSREN---VHEARELFNRMVK--RGLEPDVLNYNVLIDGYCKTKMV 351
Query: 124 TEAIRHFRALQN---------YEGGTKVLHNEGNFGD------------------PLSLY 156
EA+ F+ L N Y L N G ++
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411
Query: 157 LRALCREGRIIELLEALEAMAK 178
+ ALC+EGRI+E L L M K
Sbjct: 412 IDALCKEGRILEALGVLVMMMK 433
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 19/182 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAA-GRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
++ CK GD +A EI EM + ++ L+ G + AF FE M
Sbjct: 239 LVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEM-VS 297
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D++ PD TYN +I + R DR ++V + + PNV Y+ LV+
Sbjct: 298 RDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFM-----KSNGCYPNVYNYSALVD---G 349
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMA 177
C V + L++ +G + G D ++ + LCR G+ E +E LE M
Sbjct: 350 LCKVGK-------LEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMK 402
Query: 178 KD 179
++
Sbjct: 403 EN 404
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 32/142 (22%)
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
KPD TYN +++ Y E+ V + EL MV+ + L+P+V Y +L++ + K V
Sbjct: 297 KPDIVTYNALMEGYCSREN---VHEARELFNRMVK--RGLEPDVLNYNVLIDGYCKTKMV 351
Query: 124 TEAIRHFRALQN---------YEGGTKVLHNEGNFGD------------------PLSLY 156
EA+ F+ L N Y L N G ++
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411
Query: 157 LRALCREGRIIELLEALEAMAK 178
+ ALC+EGRI+E L L M K
Sbjct: 412 IDALCKEGRILEALGVLVMMMK 433
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK G + EI + M+ R + ++ L+ CG + AT E E
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLI--HGLCGSGNLDGATRVYKEMAE 318
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ + PD YN ++ Y RA R+++ EL +M ++ R V +Y +L+ +
Sbjct: 319 NGVSPDVVVYNTMLNGYLRA---GRIEECLELWKVMEKEGCR---TVVSYNILIRGLFEN 372
Query: 121 CAVTEAIRHFRAL---------QNYEGGTKVLHNEGNFGDPLSLY--------------- 156
V EAI + L Y L G LS+
Sbjct: 373 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 432
Query: 157 ---LRALCREGRIIELLEALEAMAKDN-QPVP 184
+ LCREGR+ E+ L+ M K +P P
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ +AG +A IA M+ AG +N L+ A FE M+
Sbjct: 353 MISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAG 412
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++PD TYN ++ +A + V ELLG M++D QP+V T+ LV + K
Sbjct: 413 --LQPDVYTYNTLLSCLCKAGDFSAVD---ELLGNMIDDG--CQPSVVTFGTLVHGYCKA 465
Query: 121 CAVTEAIRHFRAL 133
EA++ FR++
Sbjct: 466 GKTDEALKIFRSM 478
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ A ++ EM+ AG + +N LLSC G NM +
Sbjct: 388 LIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMI--D 445
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D +P T+ ++ Y +A D + +G R+QPN Y L++ K
Sbjct: 446 DGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMG-----EARIQPNTVIYNTLIDFLCKS 500
Query: 121 CAVTEAIRHF 130
V AI+ F
Sbjct: 501 REVDVAIKLF 510
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 71/175 (40%), Gaps = 18/175 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G A E+ EM G + L+ G E AF F + +
Sbjct: 304 LINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD 363
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+Y KP+ TY C+I Y + E +R AE+L + +++ L PN TY L++ +
Sbjct: 364 NY-KPNVYTYTCMINGYCKEEKLNR----AEMLLIRMKEQG-LVPNTNTYTCLID---GH 414
Query: 121 CAVTEAIRHFRA--LQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEAL 173
C R + L EG T + D LC++GR E + L
Sbjct: 415 CKAGNFGRAYELMDLMGKEGFTPNIFTYNAIID-------GLCKKGRFPEAYKLL 462
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 22/179 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ CK G A E+ EM G + L+ G E AF F + +
Sbjct: 907 MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSD 966
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFT 118
+Y KP+ TY +I Y + E R + M+ E K L PN TY L++
Sbjct: 967 NY-KPNVHTYTAMISGYCKEEKLSRAE-------MLFERMKEQGLVPNTNTYTTLID--- 1015
Query: 119 KYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEA 175
+C + + ++ ++ NEG F + + + LC+ GR E + L
Sbjct: 1016 GHCKAGNFSKAYELME-------LMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNT 1067
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATF-ENMEYG 59
+I CKAG A+ + EM+ G A + L+ CG + A F E +E G
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ P TYN +I+ + + R+++ +E+ M+E + ++PNV TY L++
Sbjct: 278 D---SPCAITYNTLIRGFCK---LGRLKEASEIFEFMME--RGVRPNVYTYTGLIDGLCG 329
Query: 120 YCAVTEAIRHFR-ALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
EA++ LQ E V +N + + LC++ + + LE +E M K
Sbjct: 330 VGKTKEALQLLNLMLQKDEEPNVVTYN---------IIINKLCKDSLVADALEIVELMKK 380
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK G + A + +M + + F +N LLS G + A+ FE M+ +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDD 559
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD ++N +I +A + + L+GM H L P++ TY+ L+ F K
Sbjct: 560 SF--PDVISFNIMIDGSLKAGDIKSAESL--LVGM---SHAGLSPDLFTYSKLINRFLKL 612
Query: 121 CAVTEAIRHF 130
+ EAI F
Sbjct: 613 GYLDEAISFF 622
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 24/180 (13%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK G A E+ EM G + L+ G E AF F + E
Sbjct: 278 MIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 337
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++ KP+ TY +I Y R E +R + LL M E + L PN TY L++
Sbjct: 338 NH-KPNVLTYTAMISGYCRDEKMNRAE---MLLSRMKE--QGLAPNTNTYTTLID----- 386
Query: 121 CAVTEAIRHFRALQNYEGGTKVLH--NEGNFGDPLSLY---LRALCREGRIIELLEALEA 175
H +A N+E ++++ NE F + Y + LC++GR+ E + L++
Sbjct: 387 -------GHCKA-GNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKS 438
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG+ + AL+I EM+ G + ++ A G AF +E+M +KPD
Sbjct: 318 KAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG--LKPD 375
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN ++ A+ +A D+ V E + RL P ++TY +++ + K + +A
Sbjct: 376 IVTYNILVHAFCKAGRMDKALGVLENI-----QANRLLPTIETYTSILDGYVKGGHIQKA 430
Query: 127 IRHF 130
+ F
Sbjct: 431 LEVF 434
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K GD +A + +M AAG + T + FN +++ C + V+ A + + + P
Sbjct: 513 KKGDCEHAFNMFDQMVAAGIVPTDYTFNSIIN--GLCKVGRVSEARDKLNTFIKQSFIPT 570
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ TYNC+I Y + + D + V + + PNV TY L+ F K
Sbjct: 571 SMTYNCIIDGYVKEGAIDSAESVYREMC-----RSEISPNVITYTSLINGFCK 618
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
+I+ K+ + + AL++ YE+ + T + L+ G E A FE M +YG
Sbjct: 872 IISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYG 931
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
P++ YN +I + ++ D EL MV++ R P++K+Y +LVEC
Sbjct: 932 ---CGPNSVIYNILINGFGKSGEIDFA---CELFKKMVKEGIR--PDLKSYTILVECLCI 983
Query: 120 YCAVTEAIRHFRALQ 134
+ EA+++F L+
Sbjct: 984 TGRIDEAVQYFEELK 998
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 83/216 (38%), Gaps = 48/216 (22%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEY-- 58
MI KA ALE+ ME+ G T F + + G P A TFE M+
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475
Query: 59 -----------------------GEDY--------MKPDTETYNCVIQAYTRAESYDRVQ 87
ED + PD+ TYN +++ Y++A D+
Sbjct: 476 IMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDK-- 533
Query: 88 DVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYE-GGTKVLHNE 146
+LL M+ K +P+V L+ K V A + F L+N + T V +N
Sbjct: 534 -ATQLLSEMIS--KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYN- 589
Query: 147 GNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP 182
+ L L +EG+I++ LE +M + P
Sbjct: 590 --------ILLTGLGKEGKILKALELFGSMTESGCP 617
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C++GD S AL++ +ME A F ++ ++ G + A + F+ ME +K
Sbjct: 194 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME--TKGIKS 251
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
TYN +++ +A ++ D A LL MV + + PNV T+ +L++ F K + E
Sbjct: 252 SVVTYNSLVRGLCKAGKWN---DGALLLKDMVS--REIVPNVITFNVLLDVFVKEGKLQE 306
Query: 126 A 126
A
Sbjct: 307 A 307
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G+ A + +EM G +N L+ + A A ++M + + M PD
Sbjct: 212 KEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM-FDKGVM-PD 269
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
T TYN +I+ Y S ++++ LL M LQP+V TY+LL++ + K EA
Sbjct: 270 TRTYNIMIRGYC---SLGQLEEAVRLLKKM--SGSGLQPDVVTYSLLIQYYCKIGRCAEA 324
Query: 127 IRHFRAL--QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
F ++ + + + + H + L +G +I++ + L+ M +D P
Sbjct: 325 RSVFDSMVRKGQKPNSTIYH----------ILLHGYATKGALIDVRDLLDLMIRDGIPFE 374
Query: 185 PRAM 188
RA
Sbjct: 375 HRAF 378
>gi|255569680|ref|XP_002525805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534892|gb|EEF36579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 182
Score = 47.4 bits (111), Expect = 0.026, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A E+ + A+G TT + LL G ++A A F M+ ++ +K D YN +
Sbjct: 9 AHELFKNLCASGHSPTTVIYITLLDGFCNQGHLDMALALFHEMQ--KNTLKLDCVAYNII 66
Query: 74 IQAYTRAESYDRVQDVAELLGMM-VEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRA 132
+ +A ++ D EL + +E LQP+V+TY +L++ F ++ EA + FR
Sbjct: 67 VDGMCKA---GKLNDAKELFSTLPIEG---LQPDVRTYNILIKVFCNEGSLEEAYQVFRE 120
Query: 133 LQNYEGGT 140
++ EGG+
Sbjct: 121 ME--EGGS 126
>gi|397646528|gb|EJK77308.1| hypothetical protein THAOC_00867, partial [Thalassiosira oceanica]
Length = 515
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 31 FHFNHLLSCQATCGIPEVAFAT---FENMEY----GEDYMKPDTETYNCVIQAYTRAESY 83
+ FN ++ A G E A +NM G +KPDT TYN VI AY ++
Sbjct: 57 YTFNTVIHAYAKSGAKESAAKAHRILDNMNQMYREGNSSVKPDTITYNVVINAYAKSCGK 116
Query: 84 DRVQDVAELLG--MMVEDHKRL--QPNVKTYALLVECFTK 119
Q+ LL M+ D L +PNV TY +++ F K
Sbjct: 117 GAAQEAENLLQRMHMMYDQGDLSVKPNVVTYGAVIDAFAK 156
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ +AG A++I E+E + FN L++C G + A F+ M E
Sbjct: 325 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMR--E 382
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ + PD TY+ +I+ + + D+V+ L M+ + PN+ TY +L++C +
Sbjct: 383 EGLSPDVVTYSTLIECFGKT---DKVEMACRLFDEMLAE--GCSPNIVTYNILLDCLERS 437
Query: 121 CAVTEAIRHFRALQ 134
EA+ + L+
Sbjct: 438 GRTAEAVDLYAKLK 451
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G F +N L+S G E A FE +E KPD ++N +I +
Sbjct: 309 KMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELE--NSSCKPDIISFNSLINCLGK 366
Query: 80 A----ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
E++ R +++ E + L P+V TY+ L+ECF K V A R F
Sbjct: 367 NGDIDEAHMRFKEMRE---------EGLSPDVVTYSTLIECFGKTDKVEMACRLF 412
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD +A E+ +EM G F +N +++ G E A E +
Sbjct: 890 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG--LNA 947
Query: 66 DTETYNCVIQAYTRAESYDRVQDV-AELLGMMVEDHKRLQPNVKTYALLVECF 117
DT TY ++ AY ++ D+ Q++ E+LG K LQP + T+ +L+ F
Sbjct: 948 DTVTYTTLMDAYCKSGEMDKAQEILTEMLG------KGLQPTIVTFNVLMNGF 994
>gi|224119538|ref|XP_002318099.1| predicted protein [Populus trichocarpa]
gi|222858772|gb|EEE96319.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M+ AG T++ + L+ + G E A+ TFENM+ + +KP ETY ++ A+ RA
Sbjct: 178 MKKAGIKPTSYSYTALIHAYSVSGWHEKAYITFENMQ--REGIKPSIETYTTLLDAFRRA 235
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK---YCAVTEAIRHFRAL 133
+ D+ +L MM E +++ T+ +L++ F K Y + I F+
Sbjct: 236 GDTKTLMDIWKL--MMRE---KVEGTRVTFNILLDGFAKQGHYMEARDVINEFKKF 286
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C G AL I EME G + +N L+ + E A + M+
Sbjct: 52 LIKSFCDEGLKKEALIIQTEMERRGISSNAIIYNTLMDSYSKSNQIEEAEGLYSEMQ--A 109
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQ-DVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP + T+N ++ AY+R R+Q D+ E L + ++D L PN K+Y L+ + +
Sbjct: 110 KGLKPTSATFNILMDAYSR-----RMQPDIIEKLLLEMQDAG-LAPNAKSYTCLISAYGR 163
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK + S AL++ EM++ G T +N L++ C ++ A E +KP
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVN--GLCNEGKLNEAKVLLDEMLSSNLKP 371
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TYN +I Y + + + +++ + +G + L PNV T+ L+ + K+ + E
Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIG-----KQGLTPNVITFNTLLHGYCKFGKMEE 426
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
A LQ L N + + + CREG++ E+ L M Q
Sbjct: 427 AF----LLQKVMLEKGFLPNASTY----NCLIVGFCREGKMEEVKNLLNEM----QCRGV 474
Query: 186 RAMILSRKYRTLVSSWIE 203
+A ++ Y L+S+W E
Sbjct: 475 KADTVT--YNILISAWCE 490
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 21/148 (14%)
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P+ TYN +I Y + ++ +L MVE+ ++ PN T+ +L++ F K ++
Sbjct: 263 PNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVEN--KVSPNSVTFNVLIDGFCKDENLS 320
Query: 125 EAIRHFRALQNYEG--GTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP 182
A++ F +Q+ +G T V +N + LC EG++ E L+ M N
Sbjct: 321 AALKVFEEMQS-QGLKPTVVTYNS---------LVNGLCNEGKLNEAKVLLDEMLSSN-- 368
Query: 183 VPPRAMILSRKYRTLVSSWI-EPLQEEA 209
+ P + Y L++ + + L EEA
Sbjct: 369 LKPNVI----TYNALINGYCKKKLLEEA 392
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++ C G AL I EME G + T +N L+ E F M +
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR--D 407
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQ-DVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP TYN ++ AY R R+Q D+ E L +ED L+PNVK+Y L+ + +
Sbjct: 408 KGLKPSAATYNILMDAYAR-----RMQPDIVETLLREMEDLG-LEPNVKSYTCLISAYGR 461
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 36/161 (22%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD + A + EM G + L+ T G E FA FE M G ++P
Sbjct: 49 CKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGG--VEP 106
Query: 66 DTETYNCVIQAYTRAESYDRVQ--------------------------------DVAELL 93
+ TYNC+I + R ++R + D A+LL
Sbjct: 107 NLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLL 166
Query: 94 GMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
MM + R P++ T+ LLV+ + K ++ A+ F ++
Sbjct: 167 DMMRTEGTR--PSIITFNLLVDGYGKAGKMSNALPFFNQMK 205
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG AL + EM +N LLS G E A M +K D
Sbjct: 421 KAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREM--ASVGIKKD 478
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN ++ Y + YD V+ V M +H + PN+ TY+ L++ ++K EA
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKV---FAEMKREH--VLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 127 IRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ FR ++ G + VL+ S + ALC+ G + + ++ M K+
Sbjct: 534 MEVFREFKS--AGLRADVVLY---------SALIDALCKNGLVGSAVSLIDEMTKE 578
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 2 IAEDCKAG--DHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
+ C G D L + EM G +N LL A G+ + A F M
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMN-- 269
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E + PD TY+ ++Q + + +R++ V+ELL M E L P++ +Y +L+E + +
Sbjct: 270 ESGIVPDINTYSYLVQTFGK---LNRLEKVSELLREM-ESGGNL-PDITSYNVLLEAYAE 324
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLY 156
++ EA+ FR +Q + N + L+LY
Sbjct: 325 LGSIKEAMDVFRQMQ----AAGCVANAATYSVLLNLY 357
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ + G+ A+ I E+E + +N L++C G + A F+ M+ E
Sbjct: 483 LISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ--E 540
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ +++ + + E RV+ L M+ K QPN+ TY +L++C K
Sbjct: 541 KGLNPDVVTYSTLMECFGKTE---RVEMAYSLFEEMLV--KGCQPNIVTYNILLDCLEKS 595
Query: 121 CAVTEAI 127
EA+
Sbjct: 596 GRTAEAV 602
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ C AG A+E+ ++ G + T +N + S FE M+ +
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK--K 470
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D PD TYN +I ++ R D ++ E L + +P++ +Y L+ C K
Sbjct: 471 DGPSPDIFTYNILISSFGRVGEVDEAINIFEEL-----ERSDCKPDIISYNSLINCLGKN 525
Query: 121 CAVTEAIRHFRALQ 134
V EA F+ +Q
Sbjct: 526 GDVDEAHVRFKEMQ 539
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
+GD ALE+ ++ G +N L+SC G+ + A +M+ G +P+
Sbjct: 431 SGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR--YRPNV 488
Query: 68 ETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
+YN ++ + +R D E+L M E K QPN TY LL+E
Sbjct: 489 VSYNIILLGLCKV---NRANDAIEVLAAMTE--KGCQPNETTYILLIE 531
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 78/209 (37%), Gaps = 40/209 (19%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI C G ALEI E+ T + L+ G +VA + M
Sbjct: 179 MIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEML--S 236
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELL----------------------GMMVE 98
++PDT TYN +I+ + D+ ++ L G E
Sbjct: 237 KGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSE 296
Query: 99 DHKRL--------QPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFG 150
K + +PNV T+++L+ + V EA+ R+++ K L +
Sbjct: 297 GEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKE-----KGLKPDAYCY 351
Query: 151 DPLSLYLRALCREGRIIELLEALEAMAKD 179
DPL + CREGR+ E LE M D
Sbjct: 352 DPL---IAGFCREGRLDLATEFLEYMISD 377
>gi|147789723|emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]
Length = 550
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 17/172 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPE-VAFATFENMEYGEDYMK 64
CK A+E+ +M G +N L++ G E A + + +G M
Sbjct: 281 CKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHG---MG 337
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P+T TYN ++ + +D V ++ ++ M + P V TY +L+ KY +
Sbjct: 338 PNTVTYNTLLHSLCTHGYWDEVDEILLIMNMTSQ-----PPTVVTYNILINGLCKYGLLD 392
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
AI F + ++ ++ + L ALC+EG + E L L ++
Sbjct: 393 RAINFFDQMVSHNCLPDII--------TYNTLLAALCKEGMVDEALHLLHSL 436
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 87/229 (37%), Gaps = 40/229 (17%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKA ALE+ +M+ A T +N L+ G E A A F+ M E
Sbjct: 346 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML--E 403
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
KPD TYN ++ + +A + D V + M H PNV TY L+ K
Sbjct: 404 AGCKPDVYTYNILVSGFCKAGNTDAACGVFD---DMSSSH--CSPNVVTYGTLISGLCKR 458
Query: 121 CAVTEAIRHFRALQN---------YEGGTKVLHNEGNFGDPLSLY--------------- 156
+T+A +F+ ++ Y L G L+
Sbjct: 459 RQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRT 518
Query: 157 --LRALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIE 203
+ LC+ R+ E + A+ K+ P P Y +++S+ I+
Sbjct: 519 RLIFHLCKANRVDEAVSLFNAIRKEGMPHP-------YAYNSIISTLIK 560
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM TF +N L+ A G A + M+ ED + P
Sbjct: 665 CKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMK--EDGVPP 722
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY I A +A R Q V E + + L+PN+KTY L++ + K
Sbjct: 723 NIHTYTSYINACCKAGDMQRAQKVIEEMADV-----GLKPNLKTYTTLIKGWAKASLPDR 777
Query: 126 AIRHFRALQ 134
A++ F ++
Sbjct: 778 ALKSFEEMK 786
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAGD A ++ EM G + L+ A +P+ A +FE M+ +KP
Sbjct: 735 CKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAG--LKP 792
Query: 66 DTETYNCVIQA 76
D Y+C++ +
Sbjct: 793 DEAAYHCLVTS 803
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 15/183 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMAT-TFHFNHLLSCQATCGIPEVAFATFENMEYG 59
MI CK G NAL + +M + F ++ L++ E A+ +E M
Sbjct: 281 MIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEML-- 338
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ PD TYN ++ ++ D+ ++ +G+ PNV TY +L++ F K
Sbjct: 339 DTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGV----GNVCDPNVITYTVLIDRFCK 394
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ +A++ + ++ G +L + F + ++ LC+E RI E E E++ K
Sbjct: 395 VDRLGDAVKLAKEME----GRSLLPDAVTF----TTVIQKLCKESRIDEAHELFESIGKT 446
Query: 180 NQP 182
+P
Sbjct: 447 CKP 449
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD +A E+ +EM G F +N +++ G E A E +
Sbjct: 910 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG--LNA 967
Query: 66 DTETYNCVIQAYTRAESYDRVQDV-AELLGMMVEDHKRLQPNVKTYALLVECF 117
DT TY ++ AY ++ D+ Q++ E+LG K LQP + T+ +L+ F
Sbjct: 968 DTVTYTTLMDAYCKSGEMDKAQEILKEMLG------KGLQPTIVTFNVLMNGF 1014
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I + G+ A EI E+++ G + + +N LL + G P A FE M E
Sbjct: 247 LINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETML--E 304
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+K D +YN +I A+ RA Q + + + +P +K++ LL+ F K
Sbjct: 305 AGVKADHVSYNILIDAFGRAGLISDAQAIYDSM-----KKVGFKPTMKSHILLLSAFVKA 359
Query: 121 CAVTEAIRHFRALQN 135
VT+A R L++
Sbjct: 360 GRVTDAENFVRRLES 374
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+++ KAG ++A +E+ G TF FN LL G + + +E+M+
Sbjct: 352 LLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQ--G 409
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
KPD T N +I Y + +R +++ L + K P+V ++ L+ ++K
Sbjct: 410 SVCKPDIITLNTLINVYAQGGYIERAEEIFNSL-----ESKGFTPDVMSWTSLMGAYSK 463
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G+ E+ +M G + +N L+ G E AF E M E +P
Sbjct: 512 CERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQE--FQP 569
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
DT TYN +++ ++ DV LL E PNV TYALL+E + K + +
Sbjct: 570 DTYTYNFLMKGLA---DMGKIDDVHRLLHEAKE--YGFVPNVYTYALLLEGYCKADRIED 624
Query: 126 AIRHFRALQNYEGG--TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
A++ F+ L +YE + V++N + + A CR G + E + +AM
Sbjct: 625 AVKFFKNL-DYEKVELSSVVYN---------ILIAAYCRIGNVTEAFKLRDAM 667
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
+GD AL + EM + G +N ++SC G+ + AF +M E P
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE--FHPSV 508
Query: 68 ETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
TYN V+ + +A R++D +L MV + R PN TY +L+E
Sbjct: 509 VTYNIVLLGFCKAH---RIEDAINVLESMVGNGCR--PNETTYTVLIE 551
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 24/182 (13%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK ++ EM AGR TF +N +++C G E A E M E P
Sbjct: 208 CKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI--EKKCGP 265
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAE-LLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
D TYN ++ + + D + + E ++G +R P V TY L+ F++ +
Sbjct: 266 DVVTYNSLMDGFCKVSKMDEAERLLEDMVG------RRCAPTVITYTTLIGGFSRADRLA 319
Query: 125 EAIRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA-KDN 180
+A R + ++ G V +N L LC+ G++ E E LE M KD
Sbjct: 320 DAYRVMEDM--FKAGISPDLVTYN---------CLLDGLCKAGKLEEAHELLEVMVEKDC 368
Query: 181 QP 182
P
Sbjct: 369 AP 370
>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 810
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G+ N + M A G +N L+ A G+ A + +++ ++ + PD
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK--QNGIIPDVV 391
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+Y C++ +Y R+ + ++V ++ +R +PNV TY L++ + + EA+
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEV-----FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 129 HFRALQ 134
FR ++
Sbjct: 447 IFRQME 452
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
+GD AL + EM + G +N ++SC G+ + AF +M E P
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE--FHPSV 508
Query: 68 ETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
TYN V+ + +A R++D +L MV + R PN TY +L+E
Sbjct: 509 VTYNIVLLGFCKAH---RIEDAINVLESMVGNGCR--PNETTYTVLIE 551
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL++ EM + G F +N ++ G+ + AF N+E +PD +YN +
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG--CEPDVISYNIL 304
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
++A ++ + +L+ M + + PNV TY++L+ + + EA+ + +
Sbjct: 305 LRALLNQGKWEEGE---KLMTKMFSE--KCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 134 QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
+ K L + DPL + A CREGR+ +E LE M D
Sbjct: 360 KE-----KGLTPDAYSYDPL---IAAFCREGRLDVAIEFLETMISD 397
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G +A EM G + +N ++ G + M +
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TYN +I Y + D++ D +LL MM + +++QP+V TY +L+ F+ +
Sbjct: 537 --VSPDLITYNTLIHGYIKE---DKMHDAFKLLNMM--EKEKVQPDVVTYNMLINGFSVH 589
Query: 121 CAVTEA 126
V EA
Sbjct: 590 GNVQEA 595
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ CKA + + EME N ++ + G E A A ++M
Sbjct: 162 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMV--S 219
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KP TYN V++ R+ +D+ +V + + D + P+V+++ +L+ F +
Sbjct: 220 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM-----DDFGVAPDVRSFTILIGGFCRV 274
Query: 121 CAVTEAIRHFRALQN 135
+ EA++ ++ +++
Sbjct: 275 GEIEEALKIYKEMRH 289
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 100/261 (38%), Gaps = 49/261 (18%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CKAG +A+ + +M A G +N L++ G A A ++ M
Sbjct: 311 VISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRR 370
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD T++ +I Y R D D ++ M + H +QPN T+ +++ F K
Sbjct: 371 --CLPDVVTFSSLIDGYCRCGQLD---DAMKIWTEMAQYH--IQPNAHTFCIIIHTFCKQ 423
Query: 121 CAVTEAIRHFRALQN-----------YEGGTKVLHNEGNFGDP----------------- 152
EA+ HF N Y VL G +
Sbjct: 424 NRSGEAL-HFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKY 482
Query: 153 -LSLYLRALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIEPLQEEAEL 211
++ + C +GRI E + M + P +++ V+S+I L +
Sbjct: 483 TYTILIIGHCMKGRIAEAVTFFHKMVETG--CSPDSIV--------VNSFISCLLKSGMP 532
Query: 212 GYEIDYIARYISEGGLTGERK 232
G E+D+I R I+ GG + K
Sbjct: 533 G-EVDHIMR-IAAGGASSSWK 551
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD + EME G F ++ L+S + G E F M + P
Sbjct: 210 CKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEML--RKNVTP 267
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY+C++ A + + + ++ A++L M +++P+V Y +L + +K ++
Sbjct: 268 NVVTYSCLMNALCKKQKW---KEAAQMLDTMTG--CKVRPDVVAYTVLADGLSKNGRASD 322
Query: 126 AIRHFRAL-QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQ 181
AI+ + + E V +N + LC+EGR+ + L LE MAK +
Sbjct: 323 AIKVLDLMVKRGEEPNNVTYNA---------IINGLCKEGRVDDALGILETMAKKGK 370
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ K+ + AL++ YE+ + T + L+ G E A FE M
Sbjct: 864 IISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP--- 920
Query: 61 DY-MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
DY KP+ YN +I + +A V +L M+++ R P++K+Y +LVEC
Sbjct: 921 DYQCKPNCAIYNILINGFGKA---GNVNIACDLFKRMIKEGIR--PDLKSYTILVECLFM 975
Query: 120 YCAVTEAIRHFRALQ 134
V +A+ +F L+
Sbjct: 976 TGRVDDAVHYFEELK 990
>gi|21537126|gb|AAM61467.1| unknown [Arabidopsis thaliana]
Length = 766
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C+ +A+ + +++ G +N L+ E + +ME +
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME--K 574
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ KPD+ TYN +I + + + ++ V+ + E M ED L P V TY +++ +
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMME---QMREDG--LDPTVTTYGAVIDAYCSV 629
Query: 121 CAVTEAIRHFR--ALQNYEGGTKVLHN--------EGNFGDPLSL 155
+ EA++ F+ L + V++N GNFG LSL
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C AGD ALE+ EM++AG F +++ A G + A +M G
Sbjct: 118 VISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM--GC 175
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D P+ TY +I A+ RA+ ++++ +LL M E + PN+ TY +LV+ K
Sbjct: 176 D---PNVVTYTALIAAFARAK---KLEEAMKLLEEMRE--RGCPPNLVTYNVLVDALCKL 227
Query: 121 CAVTEA 126
V A
Sbjct: 228 SMVGAA 233
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 35/232 (15%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI C G A E+ E+ G + + L+ G A F+ E
Sbjct: 172 MIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFD--ELVS 229
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++PD TYN +I+ + DR D L + P+V +Y +L
Sbjct: 230 RGLRPDLYTYNAIIRGICKEGMEDRALDFVRHL-----SARGCNPDVVSYNIL------- 277
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFG-DP----LSLYLRALCREGRIIELLEALEA 175
+R F +E G +++ + G +P S+ + + CREGR+ E + LE
Sbjct: 278 ------LRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEV 331
Query: 176 MAKDNQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGL 227
M K+ P S Y L+S++ +E L I+Y+ + +S+G L
Sbjct: 332 M-KEKGLTPD-----SYSYDPLISAFC----KEGRLDLAIEYLEKMVSDGCL 373
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK G A+E +M + G + ++N +L+ G ++A FE ++ E
Sbjct: 347 LISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLD--E 404
Query: 61 DYMKPDTETYNCVIQA-YTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
P YN + A ++ ++ ++E++ K + P+ TY L+ C +
Sbjct: 405 VGCPPTVRAYNTMFSALWSCGNKIKALEMISEMI------RKGIDPDEITYNSLISCLCR 458
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
V EAI ++ V+ ++ L +C+ R+ E +E L M
Sbjct: 459 DGLVDEAIGLLVDMEATRFQPTVIS--------FNIVLLGMCKAHRVFEGIELLITMV 508
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 21/175 (12%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMKP 65
K G +NA+ + M+ G T+ + +L+S + G E AF+ F M E+G + P
Sbjct: 459 KQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG---ISP 515
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TYN +I Y +V D L MVE P+ TY +++ F+K ++E
Sbjct: 516 NVVTYNAIINGYLTVA---KVDDALALFWKMVESGN--VPSSGTYNMMISGFSKTNRISE 570
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAK 178
A +N+ G + +G + ++ ++ LC+ GR + M K
Sbjct: 571 A-------ENFCGK---MVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKK 615
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 91/234 (38%), Gaps = 36/234 (15%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ + G +A + EM G +N +++ T + A A F M E
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMV--E 545
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P + TYN +I +++ +R+ + G MV+ + L PNV TY ++ K
Sbjct: 546 SGNVPSSGTYNMMISGFSKT---NRISEAENFCGKMVK--QGLLPNVITYTSFIDGLCKN 600
Query: 121 CAVTEAIR---------HFRALQNYEGGTKVLHNEGNF--------------GDPLSLYL 157
+ A + +F L Y L EG D + +
Sbjct: 601 GRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLV 660
Query: 158 RALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIEPLQEEAEL 211
R LC +GR E + +E+M K + + P I YR L+ + L+ E+ L
Sbjct: 661 RGLCGKGRCYEADQLVESMKK--KGLQPSEEI----YRALLVGQCKNLEVESAL 708
>gi|168023641|ref|XP_001764346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684498|gb|EDQ70900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 978
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ KAG +I +EME AG A F ++ A G AF + M
Sbjct: 336 LISACAKAGKVDLLFQIFHEMEVAGIEANVHTFGAMIDGCARAGQLPKAFGAYGIMI--S 393
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KPD +N +I A TRA + R DV L M + ++P+ TY L+ +
Sbjct: 394 KNVKPDRVIFNTLINACTRAGAVQRAFDV---LTDMKAEATPIKPDHVTYGALISACARA 450
Query: 121 CAVTEAIRHFRALQ--NYEGG----TKVLH---NEGNFGDPLSLY 156
V A+ ++ ++ N +G T V+H +GN L +Y
Sbjct: 451 GEVDRALEVYQNMRESNVKGSPACYTAVVHACSQKGNVDYALLVY 495
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI K G S A+++ EM+ G + +N L+S G+ A + ME E
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME--E 542
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ + D ++N ++ + R R ++ E + H ++P+ TY L+ CF
Sbjct: 543 NGCRADINSHNIILNGFARTGVPRRAIEMFETI-----KHSGIKPDGVTYNTLLGCFAHA 597
Query: 121 CAVTEAIRHFRALQN 135
EA R R +++
Sbjct: 598 GMFEEAARMMREMKD 612
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK+GD A ++ EME+ F +N L+S G+ A + ME G
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TYN +I + R R+++ L + PN TY L++ + +
Sbjct: 263 --VSPDIVTYNSLIYGFCRE---GRMREALRLF----REINGATPNHVTYTTLIDGYCRV 313
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
+ EA+R R + EG LH + + LR LC EG+I
Sbjct: 314 NDLEEALR-LREVMEVEG----LHPGVVTYNSI---LRKLCEEGKI 351
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G+ N + M A G +N L+ A G+ A + +++ ++ + PD
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK--QNGIIPDVV 391
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+Y C++ +Y R+ + ++V ++ +R +PNV TY L++ + + EA+
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEV-----FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 129 HFRALQ 134
FR ++
Sbjct: 447 IFRQME 452
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI K G S A+++ EM+ G + +N L+S G+ A + ME E
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME--E 542
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ + D ++N ++ + R R ++ E + H ++P+ TY L+ CF
Sbjct: 543 NGCRADINSHNIILNGFARTGVPRRAIEMFETI-----KHSGIKPDGVTYNTLLGCFAHA 597
Query: 121 CAVTEAIRHFRALQN 135
EA R R +++
Sbjct: 598 GMFEEAARMMREMKD 612
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK+GD A ++ EME+ F +N L+S G+ A + ME G
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TYN +I + R R+++ L + PN TY L++ + +
Sbjct: 263 --VSPDIVTYNSLIYGFCRE---GRMREALRLF----REINGATPNHVTYTTLIDGYCRV 313
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
+ EA+R R + EG LH + + LR LC EG+I
Sbjct: 314 NDLEEALR-LREVMEVEG----LHPGVVTYNSI---LRKLCEEGKI 351
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G + A+E+ +ME ++ ++ G + AF F ME K
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG--FKA 296
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I + A +D D A+LL M++ +++ PNV T+++L++ F K + E
Sbjct: 297 DIITYNTLIGGFCNAGRWD---DGAKLLRDMIK--RKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 126 AIRHFR-ALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
A + + +Q + +N + C+E R+ E ++ ++ M
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNS---------LIDGFCKENRLEEAIQMVDLM 394
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G A+++ +ME AG FN ++ CG + AF E M E M+P
Sbjct: 271 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV--ERGMEP 328
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
TY+ +++ TRA+ R+ D +L M + K PNV Y L++ F + ++ +
Sbjct: 329 TLITYSILVKGLTRAK---RIGDAYFVLKEMTK--KGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 126 AI 127
AI
Sbjct: 384 AI 385
>gi|293336971|ref|NP_001167873.1| uncharacterized protein LOC100381578 [Zea mays]
gi|223944573|gb|ACN26370.1| unknown [Zea mays]
gi|414585240|tpg|DAA35811.1| TPA: hypothetical protein ZEAMMB73_503732 [Zea mays]
Length = 640
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M AG + +N LL + + A F+ M E ++PD +YN +I+ Y RA
Sbjct: 195 MRLAGVEPSRLTYNCLLDGLVNADLLDTAINVFDAMS-TEHRVRPDVVSYNILIKGYCRA 253
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGT 140
R QD L M E H L P+ TY L++ + I F+ ++ G
Sbjct: 254 ---GRTQDAMARLADMRE-HAELAPDKVTYLTLMQRHYSEATFPQCIALFQEMEERGMGK 309
Query: 141 KVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP 182
++ + L + AL ++G+ E L E M+K P
Sbjct: 310 EIPQHA------YVLVIGALSKDGKPFEALAVFERMSKRGCP 345
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G A+++ +ME AG FN ++ CG + AF E M E M+P
Sbjct: 260 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV--ERGMEP 317
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
TY+ +++ TRA+ R+ D +L M + K PNV Y L++ F + ++ +
Sbjct: 318 TLITYSILVKGLTRAK---RIGDAYFVLKEMTK--KGFPPNVIVYNNLIDSFIEAGSLNK 372
Query: 126 AI 127
AI
Sbjct: 373 AI 374
>gi|15233137|ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183498|sp|Q9M316.1|PP292_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g61520, mitochondrial; Flags: Precursor
gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis thaliana]
gi|332646696|gb|AEE80217.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C+ +A+ + +++ G +N L+ E + +ME +
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME--K 574
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ KPD+ TYN +I + + + ++ V+ + E M ED L P V TY +++ +
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMME---QMREDG--LDPTVTTYGAVIDAYCSV 629
Query: 121 CAVTEAIRHFR--ALQNYEGGTKVLHN--------EGNFGDPLSL 155
+ EA++ F+ L + V++N GNFG LSL
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAA----GRM--ATTFHFNHLLSCQATCGIPEVAFATFE 54
+I CK+ ALE+ +M G + A + HFN L+ G + A
Sbjct: 335 LINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 55 NMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLV 114
M+ E+ P+ TYNC+I Y RA +++ E++ M ED ++PNV T +V
Sbjct: 395 RMKL-EERCAPNAVTYNCLIDGYCRA---GKLETAKEVVSRMKEDE--IKPNVVTVNTIV 448
Query: 115 ECFTKYCAVTEAIRHF 130
++ + A+ F
Sbjct: 449 GGMCRHHGLNMAVVFF 464
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 18/182 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK+ D LE+ E+ G ++ ++ G A FE M
Sbjct: 185 LIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS--- 241
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P TYN +I Y RA D + LLG MV+D + P+V TY L+ F K
Sbjct: 242 --CAPTAITYNSLIGGYCRAGDMD---EAIRLLGKMVDD--KCAPDVVTYTTLMSAFCKM 294
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+ +A F+ + + V+ + + LC EGR+ + LE LE + +
Sbjct: 295 GRLDDAYELFQQMVANKLSPDVV--------TFTSLVDGLCGEGRMEDALELLEEITRRG 346
Query: 181 QP 182
P
Sbjct: 347 CP 348
>gi|225425456|ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Vitis vinifera]
Length = 792
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C G +AL + E++ +G F + L+ + + A F M+Y + P
Sbjct: 283 CLVGKVKDALIVWEELKGSGHEPDAFTYRILIQGCSKSYRMDDAMRIFNEMQY--NGFCP 340
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
DT YN ++ +A +V + ++ MVED R C+T +
Sbjct: 341 DTIVYNTLLDGLFKAR---KVMEACQVFEKMVEDGVR-----------ASCWTHNIVICG 386
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRIIELLEALEAM 176
R+ RA Y L +G F D + S+ + LCREG++ E L+ +E M
Sbjct: 387 LFRNGRAAAGYTLFCD-LKKKGKFVDGITYSIVVLQLCREGQLEEALQLVEEM 438
>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C+ +A+ + +++ G +N L+ E + +ME +
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME--K 574
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ KPD+ TYN +I + + + ++ V+ + E M ED L P V TY +++ +
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMME---QMREDG--LDPTVTTYGAVIDAYCSV 629
Query: 121 CAVTEAIRHFR--ALQNYEGGTKVLHN--------EGNFGDPLSL 155
+ EA++ F+ L + V++N GNFG LSL
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAA----GRM--ATTFHFNHLLSCQATCGIPEVAFATFE 54
+I CK+ ALE+ +M G + A + HFN L+ G + A
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 55 NMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLV 114
M+ E+ P+ TYNC+I Y RA +++ E++ M ED ++PNV T +V
Sbjct: 395 RMKL-EERCVPNAVTYNCLIDGYCRA---GKLETAKEVVSRMKEDE--IKPNVVTVNTIV 448
Query: 115 ECFTKYCAVTEAIRHF 130
++ + A+ F
Sbjct: 449 GGMCRHHGLNMAVVFF 464
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 15/161 (9%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G T+ + L+ + G E A+A FENM+ + +KP ETY ++ A+ R
Sbjct: 462 KMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQ--REGIKPSIETYTALLDAFRR 519
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGG 139
A + + +L+ ++++ T+ LV+ F K+ EA N
Sbjct: 520 AGDTQTLMKIWKLM-----RREKVEGTRVTFNTLVDGFAKHGYYKEARDVISKFANVGLH 574
Query: 140 TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
V+ ++ + A R GR +L E LE MA N
Sbjct: 575 PTVM--------TYNMLMNAYARGGRHSKLPELLEEMAAHN 607
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C G S AL I E+E G + T +N L+ E A F M+
Sbjct: 337 LIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMK--T 394
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP T+N ++ AY+R + V+ +L+ M E L+PN K+Y ++ + K
Sbjct: 395 KGIKPTEATFNILMYAYSRKMQPEIVE---KLMAEMQET--GLKPNAKSYTCIISAYGK 448
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
+GD AL + EM + G +N L+S G+ + A +ME E +P
Sbjct: 436 SGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTE--WQPTV 493
Query: 68 ETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
+YN V+ +A R+ D E+L +MV++ QPN TY LLVE
Sbjct: 494 ISYNIVLLGLCKAH---RIVDAIEVLAVMVDNG--CQPNETTYTLLVE 536
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 16/184 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK G A+ +M +AG + ++N ++ G + A F+ +E E
Sbjct: 359 LISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLE--E 416
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P+ +YN + A S D+++ + +L M+ + P+ TY L+ +
Sbjct: 417 VGCPPNASSYNTMFGAL--WSSGDKIRALTMILEML---SNGVDPDRITYNSLISSLCRD 471
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
V EAI ++ E V+ ++ L LC+ RI++ +E L M DN
Sbjct: 472 GMVDEAIGLLVDMERTEWQPTVIS--------YNIVLLGLCKAHRIVDAIEVLAVMV-DN 522
Query: 181 QPVP 184
P
Sbjct: 523 GCQP 526
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G+ N + M A G +N L+ A G+ A + +++ ++ + PD
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK--QNGIIPDVV 391
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+Y C++ +Y R+ + ++V ++ +R +PNV TY L++ + + EA+
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEV-----FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 129 HFRALQ 134
FR ++
Sbjct: 447 IFRQME 452
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 23/134 (17%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G +A EM G + +N ++ G N+ G+
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG----------NVSKGQ 465
Query: 61 DYMK--------PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYAL 112
+++ PD TYN +I Y + D++ D +LL MM + +++QP+V TY +
Sbjct: 466 KFLQKMMVNKVSPDLITYNTLIHGYIKE---DKMHDAFKLLNMM--EKEKVQPDVVTYNM 520
Query: 113 LVECFTKYCAVTEA 126
L+ F+ + V EA
Sbjct: 521 LINGFSVHGNVQEA 534
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ CKA + + EME N ++ + G E A A ++M
Sbjct: 101 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMV--S 158
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KP TYN V++ R+ +D+ +V + + D + P+V+++ +L+ F +
Sbjct: 159 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM-----DDFGVAPDVRSFTILIGGFCRV 213
Query: 121 CAVTEAIRHFRALQN 135
+ EA++ ++ +++
Sbjct: 214 GEIEEALKIYKEMRH 228
>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
protein-like proteins; contains similarity to Pfam
family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C+ +A+ + +++ G +N L+ E + +ME +
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME--K 574
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ KPD+ TYN +I + + + ++ V+ + E M ED L P V TY +++ +
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMME---QMREDG--LDPTVTTYGAVIDAYCSV 629
Query: 121 CAVTEAIRHFR--ALQNYEGGTKVLHN--------EGNFGDPLSL 155
+ EA++ F+ L + V++N GNFG LSL
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAA----GRM--ATTFHFNHLLSCQATCGIPEVAFATFE 54
+I CK+ ALE+ +M G + A + HFN L+ G + A
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 55 NMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLV 114
M+ E+ P+ TYNC+I Y RA +++ E++ M ED ++PNV T +V
Sbjct: 395 RMKL-EERCVPNAVTYNCLIDGYCRA---GKLETAKEVVSRMKEDE--IKPNVVTVNTIV 448
Query: 115 ECFTKYCAVTEAIRHF 130
++ + A+ F
Sbjct: 449 GGMCRHHGLNMAVVFF 464
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ CK G A+ + +M + G TTF ++ L+ E A ATF +M+ +
Sbjct: 246 MVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQ--K 303
Query: 61 DYMKPDTETYNCVIQAYTRAESYD---RVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
D + PD YN ++ A+ + + +D RV D E G + PN +T+ +++
Sbjct: 304 DGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHG--------ITPNSRTWNIILNKL 355
Query: 118 TKYCAVTEAIRHFRAL 133
EA R FR +
Sbjct: 356 ISLGKDDEAYRVFRRM 371
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G A+++ +ME AG FN ++ CG + AF E M E M+P
Sbjct: 284 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV--ERGMEP 341
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
TY+ +++ TRA+ R+ D +L M + K PNV Y L++ F + ++ +
Sbjct: 342 TLITYSILVKGLTRAK---RIGDAYFVLKEMTK--KGFPPNVIVYNNLIDSFIEAGSLNK 396
Query: 126 AI 127
AI
Sbjct: 397 AI 398
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA CKAG A ++ EME +G A +N L++ ++ G A + M
Sbjct: 95 LIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMT--- 151
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFT 118
PDT+TYN +I + ++ DR G + E +R P+ TY++L+
Sbjct: 152 --TTPDTQTYNAIIHGFCKSGEIDRAY------GFLEEMKQRAGCSPDTFTYSILINGLC 203
Query: 119 K 119
K
Sbjct: 204 K 204
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A+E+ +M+ G M +N ++SC + + A +M KPDT ++N V
Sbjct: 375 AIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSM-----LCKPDTISFNAV 429
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
++ RAE R D AEL+ M+++ N T+ +L++ + V +AI F +
Sbjct: 430 LKCLCRAE---RWYDAAELMAKMLKED--CHTNEMTFNILIDSLCQNGQVKDAIEMFELM 484
Query: 134 QNY 136
Y
Sbjct: 485 PKY 487
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA CKAG A ++ EME +G A +N L++ ++ G A + M
Sbjct: 95 LIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMT--- 151
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFT 118
PDT+TYN +I + ++ DR G + E +R P+ TY++L+
Sbjct: 152 --TTPDTQTYNAIIHGFCKSGEIDRAY------GFLEEMKQRAGCSPDTFTYSILINGLC 203
Query: 119 K 119
K
Sbjct: 204 K 204
>gi|9755888|emb|CAC01941.1| RSP67.2 [Raphanus sativus]
Length = 700
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 562 AIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIIS 621
A I +I G P A +IRA RA L I ++ G LY+ ++S
Sbjct: 332 ATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKGMELTVLLYNTLLS 391
Query: 622 LCLDLGELDAAVAIVADMETTGIAVPDQ-TLDRVIT 656
+C D+G +D A I DM+++G PD T +IT
Sbjct: 392 MCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSLIT 427
>gi|413917008|gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
Length = 600
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KAGD++ A ++ +M G +T FN L+S + EV+ ++ M+
Sbjct: 254 MIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETE--YKEVS-NIYDQMQRAG 310
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KPD +Y+ +I+AY +A R ++ + M++ R P K+Y +L++ F
Sbjct: 311 --LKPDVVSYSLLIKAYGKAR---REEEALAVFEEMLDAGVR--PTRKSYNILLDAFAIS 363
Query: 121 CAVTEAIRHFRALQNY 136
V EA FRA++ +
Sbjct: 364 GLVEEANTVFRAMRRH 379
>gi|9755886|emb|CAC01940.1| 67kD chloroplastic RNA-binding protein, P67.1 [Raphanus sativus]
Length = 700
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 562 AIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLYDEIIS 621
A I +I G P A +IRA RA L I ++ G LY+ ++S
Sbjct: 332 ATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKGLELTVILYNTLLS 391
Query: 622 LCLDLGELDAAVAIVADMETTGIAVPDQ-TLDRVIT 656
+C D+G +D A I DM+++G PD T +IT
Sbjct: 392 MCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSLIT 427
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 18/177 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
I CK G S+A + +ME G + +N L+ GI F M E
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI---LGLGIKNQIFEIHGLMDEMK 621
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E + P+ TYN IQ E +V+D LL M++ K + PNV ++ L+E F K
Sbjct: 622 EKGISPNICTYNTAIQYLCEGE---KVEDATNLLDEMMQ--KNIAPNVFSFKYLIEAFCK 676
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
A F + G + L+ SL L G++++ E LEA+
Sbjct: 677 VPDFDMAQEVFETAVSICGQKEGLY---------SLMFNELLAAGQLLKATELLEAV 724
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAG LE+ ME+ G + +N ++S G + + E M E+ + P
Sbjct: 193 CKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR--EEGLVP 250
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLG-MMVEDHKRL-QPNVKTYALLVECFTKYCAV 123
D T+N I A + +V D + + M ++++ L +PN TY L+++ F K +
Sbjct: 251 DIVTFNSRISALCKE---GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+A F +++ + + +++L+ L R G+ IE L+ M
Sbjct: 308 EDAKTLFESIRENDDLASL--------QSYNIWLQGLVRHGKFIEAETVLKQM 352
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD A E+ +EM G +N L++ G E A T +M+ +KP
Sbjct: 477 CKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTA--CLKP 534
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
D TY +I A ++ DR LL M++ K ++P + TY +L+ F
Sbjct: 535 DVYTYTTLIDALCKSGDLDRAH---SLLQEMLD--KGIKPTIVTYNVLMNGF 581
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCG-IPEVAFATFENMEYG 59
+I C G +A+ + +M + + FN L+ G + E M+ G
Sbjct: 282 LINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 341
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KPD TYN ++ Y ++ + + + H+ + NV++Y++++ F K
Sbjct: 342 ---IKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMS-----HRGVTANVRSYSIMINRFCK 393
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
V +A++ F+ + + + V+ S + LC+ GRI LE + M
Sbjct: 394 IKMVDQAMKLFKEMHHKQIFPNVI--------TYSSLIDGLCKSGRISYALELNDEMHDR 445
Query: 180 NQPVPPRAMILSRKYR 195
Q P + L+R+ +
Sbjct: 446 GQ--QPDIITLTRQLK 459
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Query: 16 EIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
E+ EME+ G +N LL A G + A F M+ G + P+ TY+ ++
Sbjct: 308 ELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQ-GAGCV-PNAATYSILLN 365
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFR 131
Y R YD V+D+ L M V + +PN TY +L+ F + E + F
Sbjct: 366 LYGRHGRYDDVRDL--FLEMKVSN---TEPNAATYNILINVFGEGGYFKEVVTLFH 416
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ GD S AL + M + G +N L+SC G+ E A ++ME +
Sbjct: 423 MISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDME--Q 480
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
+P +YN V+ + R+ D + M+E K +PN TY LL+E
Sbjct: 481 SGFRPTVISYNIVLLGLCKVR---RIDDAIGMFAEMIE--KGCRPNETTYILLIE 530
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G + A+++ EM A G + + +N ++ G+ E A ++ KPD
Sbjct: 221 GGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT--SKGCKPDVI 278
Query: 69 TYNCVIQAYTRAESYDRVQD-VAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAI 127
+YN +++A+ +D + VAE+ + +PN TY++L+ ++ + EAI
Sbjct: 279 SYNILLRAFLNQGKWDEGEKLVAEMFS------RGCEPNKVTYSILISSLCRFGRIDEAI 332
Query: 128 RHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
+ + E L + DPL + ALC+EGR+
Sbjct: 333 SVLKVMIEKE-----LTPDTYSYDPL---ISALCKEGRL 363
>gi|357480587|ref|XP_003610579.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511634|gb|AES92776.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 706
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 13 NALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNC 72
+AL + EM T +N LL+ A G ++AF FE+M+ D PD+ T++
Sbjct: 374 DALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDLAFEIFEDMK-SSDTCSPDSWTFSS 432
Query: 73 VIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRA 132
+I Y+ + RV + ++ M+E +P + LV+C+ K + ++ F
Sbjct: 433 LITIYSCS---GRVSEAERMMNEMIESG--FEPTIFVLTSLVQCYGKAKRTDDVVKTFNQ 487
Query: 133 L 133
L
Sbjct: 488 L 488
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
E+++ G T +N LL G+ A + + ME E+ D+ TYN ++ AY R
Sbjct: 313 ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME--ENNCPADSVTYNELVAAYAR 370
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGG 139
A ++ A ++ MM + K + PN TY +++ + K EA++ F +++ E G
Sbjct: 371 A---GFSKEAAVVIEMMTQ--KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK--EAG 423
Query: 140 TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRA 187
+ N + LS+ L ++ R E+++ L M K N P RA
Sbjct: 424 --CVPNTCTYNAVLSM----LGKKSRSNEMIKMLCDM-KSNGCFPNRA 464
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ +AG A++I E+E + FN L++C G + A F+ M E
Sbjct: 542 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMR--E 599
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ + PD TY+ +I+ + + D+V+ L M+ + PN+ TY +L++C +
Sbjct: 600 EGLSPDVVTYSTLIECFGKT---DKVEMACRLFDEMLAE--GCSPNIVTYNILLDCLERS 654
Query: 121 CAVTEAIRHFRALQ 134
EA+ + L+
Sbjct: 655 GRTAEAVDLYAKLK 668
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G F +N L+S G E A FE +E KPD ++N +I +
Sbjct: 526 KMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSS--CKPDIISFNSLINCLGK 583
Query: 80 A----ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
E++ R +++ E + L P+V TY+ L+ECF K V A R F
Sbjct: 584 NGDIDEAHMRFKEMRE---------EGLSPDVVTYSTLIECFGKTDKVEMACRLF 629
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CKAG +A+ + +M A+G M T +N L++ G A ++ M
Sbjct: 159 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMT--R 216
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD T++ +I Y R D D + M + R+QPNV T+++++ K
Sbjct: 217 LRCPPDVVTFSSLIDGYCRCGQLD---DALRIWSDMAQ--HRIQPNVYTFSIIIHSLCKQ 271
Query: 121 CAVTEAI 127
EAI
Sbjct: 272 NRSDEAI 278
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ +AG A++I E+E + FN L++C G + A F+ M E
Sbjct: 478 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMR--E 535
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ + PD TY+ +I+ + + D+V+ L M+ + PN+ TY +L++C +
Sbjct: 536 EGLSPDVVTYSTLIECFGKT---DKVEMACRLFDEMLAEG--CSPNIVTYNILLDCLERS 590
Query: 121 CAVTEAIRHFRALQ 134
EA+ + L+
Sbjct: 591 GRTAEAVDLYAKLK 604
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G F +N L+S G E A FE +E KPD ++N +I +
Sbjct: 462 KMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELE--NSSCKPDIISFNSLINCLGK 519
Query: 80 A----ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
E++ R +++ E + L P+V TY+ L+ECF K V A R F
Sbjct: 520 NGDIDEAHMRFKEMRE---------EGLSPDVVTYSTLIECFGKTDKVEMACRLF 565
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G+ N + M A G +N L+ A G+ E A + F +++ + + PD
Sbjct: 334 GEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIK--RNGIVPDVV 391
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+Y ++ +Y R+ + ++V ++ +R +PNV TY L++ + + EA+
Sbjct: 392 SYTSLLNSYGRSRQPGKAKEV-----FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 129 HFRALQNYEGGTK 141
FR ++ + GTK
Sbjct: 447 IFRQME--QDGTK 457
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CKAG +A+ + +M A+G M T +N L++ G A ++ M
Sbjct: 328 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMT--R 385
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
PD T++ +I Y R D D + M + R+QPNV T+++++ K
Sbjct: 386 LRCPPDVVTFSSLIDGYCRCGQLD---DALRIWSDMAQ--HRIQPNVYTFSIIIHSLCK 439
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
+ GD A + EM A G F +N L+ G E A A M +KPD
Sbjct: 353 RQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG--IKPD 410
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
T+TYN +I+ Y + ++ RV+D LL M + + L P T +++ ++ ++ +A
Sbjct: 411 TQTYNNMIEGYLKEQNTSRVKD---LLSEMKKSN--LVPTAYTCGMIINGLCRHGSIEDA 465
Query: 127 IRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPV 183
R F + + G K V++ + ++ +EGR E + L+ M D + V
Sbjct: 466 SRVFEIMVSL--GVKPNAVIY---------TTLIKGHVQEGRFQEAVRILKVM--DKKGV 512
Query: 184 PPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIAR 220
P + Y +++ + + E Y ++ I R
Sbjct: 513 QPDVLC----YNSVIIGLCKSRKMEEAKDYLVEMIER 545
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
+ G A+E+ E G + F +N ++S G AF E M + + P+
Sbjct: 633 RNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYM--CQKGISPN 690
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN +I +A +R +++ + + K L N TYA +++ + K +++A
Sbjct: 691 IITYNALINGLCKAGEIERARELFDGI-----PGKGLAHNAVTYATIIDGYCKSGNLSKA 745
Query: 127 IRHFRALQ---------NYEGGTKVLHNEGNFGDPLSLYLRA-----------------L 160
R F + Y EGN LSL+L +
Sbjct: 746 FRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGF 805
Query: 161 CREGRIIELLEALEAMA 177
C+ G++IE + LE M
Sbjct: 806 CKSGKVIEANQLLEDMV 822
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 22/178 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ CK G A E+ EM G + L+ G E AF F + +
Sbjct: 320 MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSD 379
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFT 118
+Y KP+ TY +I Y + E R + M+ E K L PN TY L++
Sbjct: 380 NY-KPNVHTYTAMISGYCKEEKLSRAE-------MLFERMKEQGLVPNTNTYTTLID--- 428
Query: 119 KYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALE 174
+C + + ++ ++ NEG F + + + LC+ GR E + L
Sbjct: 429 GHCKAGNFSKAYELME-------LMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLN 479
>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
Length = 704
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 557 WEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPLY 616
W+++ I ++I+ G +P+ A ++RA RA L + ++ G LY
Sbjct: 336 WQIK---TIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILY 392
Query: 617 DEIISLCLDLGELDAAVAIVADMETTGIAVPDQ-TLDRVITSRQTG 661
+ ++++C D+G ++ AV I DM+++G PD T +IT G
Sbjct: 393 NTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCG 438
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Query: 13 NALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNC 72
+AL + EM+ G +N LL+ A G A F++M+ PD+ T++
Sbjct: 372 DALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK-SSGTCSPDSWTFSS 430
Query: 73 VIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRA 132
+I Y+ +V + E+L MVE PN+ L++C+ K V + +R F
Sbjct: 431 MITIYSCG---GKVSEAEEMLNDMVE--AGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQ 485
Query: 133 L 133
L
Sbjct: 486 L 486
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
M+PD TYN + +AY A RV ++ +L+ M + RL+PN++TYA+L+ C+ +
Sbjct: 201 MQPDAVTYNTLAKAYAAA---GRVAELEDLIADM--KNARLKPNLRTYAILISCYCQ 252
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G +E+ M G +++ FN L+ G+ E A ++M+ +
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ P++ TYN +I + R +S DR LL M E+ +L PN+ TY L+ K
Sbjct: 396 --VCPNSRTYNELICGFCRKKSMDRAM---ALLNKMYEN--KLSPNLVTYNTLIHGLCKA 448
Query: 121 CAVTEAIR 128
V A R
Sbjct: 449 RVVDSAWR 456
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK G A E+ EM G + L+ G E AF F + E
Sbjct: 281 MIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSE 340
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++ KP+ TY +I Y R + +R + LL M E + L PN TY L++ +
Sbjct: 341 NH-KPNVLTYTAMISGYCREDKLNRAE---MLLSRMKE--QGLVPNTNTYTTLID---GH 391
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLY---LRALCREGRIIELLEALE 174
C R + + ++ +EG F L Y + LC+ GR+ E + LE
Sbjct: 392 CKAGNFERAYDLMN-------LMSSEG-FSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440
>gi|302755512|ref|XP_002961180.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
gi|300172119|gb|EFJ38719.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
Length = 497
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
M+PD TYN + +AY A RV ++ +L+ M + RL+PN++TYA+L+ C+ +
Sbjct: 201 MQPDAVTYNTLAKAYAAA---GRVAELEDLIADM--KNARLKPNLRTYAILISCYCQ 252
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ A E+ +EM G + +N +++ G E E M+ Y P
Sbjct: 463 CKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFY--P 520
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
DT TY ++ AY + + ELL +M+ +KRLQP + T+ +L+ F
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAH---ELLRIML--NKRLQPTLVTFNVLMNGF 567
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C++GD S AL++ +ME A F ++ ++ G + A + F+ ME +K
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME--TKGIKS 261
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
TYN +++ +A ++ D A LL MV + + PNV T+ +L++ F K + E
Sbjct: 262 SVVTYNSLVRGLCKAGKWN---DGALLLKDMVS--REIVPNVITFNVLLDVFVKEGKLQE 316
Query: 126 A 126
A
Sbjct: 317 A 317
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C++G +E+ +ME G AT +N L++ G+ A +NM G++ ++P
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALK-LKNM-MGKNGLQP 306
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ T+N +I + RA ++Q+ +++ G M L PN TY L+ +++
Sbjct: 307 NVVTFNTLIHGFCRAV---KLQEASKVFGEM--KALNLPPNTVTYNTLINGYSQ 355
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLS--CQATCGIPEVAF--------ATFEN 55
CK G AL EM+ G +N +L+ C+ PE F F+
Sbjct: 211 CKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDE 270
Query: 56 MEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
M E ++PD +++ V+ Y+RA + Q V + LG+M E K + PNV TY +++
Sbjct: 271 MR--ESGIEPDVTSFSIVLHVYSRAH---KPQLVLDKLGLMKE--KGICPNVVTYTSVIK 323
Query: 116 CFTKYCAVTEA 126
C + EA
Sbjct: 324 CLCSCGRIEEA 334
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+GD A ++ EME F +N L+S G+ A + + ME + P
Sbjct: 217 CKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAG--ISP 274
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I + R R+++ +L D K + PN TY L++ + + + E
Sbjct: 275 DIFTYNSLIYGFCRE---GRMREAVQLF----RDIKDVTPNHVTYTSLIDGYCRVNDLDE 327
Query: 126 AIRHFRALQNYEG--GTKVLHNEGNFGDPLSLYLRALCREGRI 166
A+R + + + +G T + +N LR LC GR+
Sbjct: 328 ALR-LKEVMSEKGLYPTVITYNS---------ILRKLCEGGRL 360
>gi|242074484|ref|XP_002447178.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
gi|241938361|gb|EES11506.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
Length = 643
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M AG + +N LL G+ + A F+ M ED ++PD +YN +I+ Y RA
Sbjct: 198 MRLAGVEPSRLTYNCLLDGLVNAGLLDTAINVFDAMST-EDRVRPDVVSYNILIKGYCRA 256
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGT 140
R QD L + E L P+ TY L++ + I F+ ++ G
Sbjct: 257 ---GRTQDGMSRLADLRE-QAELAPDKVTYLTLMQRHYSEGTFPQCIALFQEMEERGMGK 312
Query: 141 KVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP 182
++ + L + AL ++G+ E L E M K P
Sbjct: 313 EIPQHA------YVLVIGALSKDGKPFEALAVFERMLKRGCP 348
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Query: 16 EIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
E+ EME+ G +N LL A G + A F M+ G + P+ TY+ ++
Sbjct: 66 ELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQ-GAGCV-PNAATYSILLN 123
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFR 131
Y R YD V+D+ L M V + +PN TY +L+ F + E + F
Sbjct: 124 LYGRHGRYDDVRDL--FLEMKVSN---TEPNAATYNILINVFGEGGYFKEVVTLFH 174
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
GD E +MEA G M F L+ + AFATF+ M + + P+
Sbjct: 346 GDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMR--KQGILPNLH 403
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
TYN +I RA R++D +LLG M + +QP TY + ++ F K +A+
Sbjct: 404 TYNTLICGLLRA---GRIEDALKLLGTM--ESVGVQPTAYTYNIFIDYFGKSGETGKAVE 458
Query: 129 HFRALQ 134
F ++
Sbjct: 459 TFEKMK 464
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
+I+ K+ + AL+ Y++ ++ T + L+ A G E A FE M +YG
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG 923
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
KP+ +N +I Y + + +L MV + R P++K+Y +LV+C
Sbjct: 924 ---CKPNCAIFNILINGYGKIGD---TETACQLFKRMVNEGIR--PDLKSYTILVDCLCL 975
Query: 120 YCAVTEAIRHFRALQN 135
V EA+ +F L++
Sbjct: 976 AGRVDEALYYFNELKS 991
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A ++ +M+ G F FN LL+ G F ++ M KPD TYN V
Sbjct: 807 AWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI--SRRCKPDAITYNIV 864
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
I + ++ + D+ D ++ D + P +TY L++ K + EA+R F +
Sbjct: 865 ISSLAKSNNLDKALDF--FYDLVSSDFR---PTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919
Query: 134 QNY 136
+Y
Sbjct: 920 SDY 922
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+G+ A+E +M+A G + N L A G A F + E+ + PD
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR--ENGLAPD 506
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
+ TYN +++ Y++ +V + LL M+ + +P+V L++ K V EA
Sbjct: 507 SVTYNMMMKCYSKV---GQVDEAVNLLSEMIRNG--CEPDVIVVNSLIDSLYKAGRVDEA 561
Query: 127 IRHFRALQNYE-GGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ F +++ + T V +N L L +EGR+ + +E E+M
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNT---------LLSGLGKEGRVQKAIELFESM 603
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL + EM G + + +N L+ G+ E A +E ++ ++PD TYN +
Sbjct: 1017 ALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG--LEPDVFTYNAL 1074
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALL 113
I+ Y+ +E+ + V + MMV+ PN+ TYA L
Sbjct: 1075 IRGYSLSENPEHAYTVYK--NMMVDG---CNPNIGTYAQL 1109
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAG-RMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
++ CK GD + A + EM+ +G + ++ L+ C + A FE+M
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM-IS 260
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
++ + PD T+N +I + RA +R + + + + PNV Y+ L+ F K
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFM-----KKNGCNPNVYNYSALMNGFCK 315
Query: 120 YCAVTEAIRHF 130
+ EA + F
Sbjct: 316 VGKIQEAKQTF 326
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G +A EM G + +N ++ G + M +
Sbjct: 162 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TYN +I Y + D++ D +LL MM + +++QP+V TY +L+ F+ +
Sbjct: 222 --VSPDLITYNTLIHGYIKE---DKMHDAFKLLNMM--EKEKVQPDVVTYNMLINGFSVH 274
Query: 121 CAVTEA 126
V EA
Sbjct: 275 GNVQEA 280
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 79/204 (38%), Gaps = 31/204 (15%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C +G+ ++AL I M G + + L+ E AF F M +
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV--D 693
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFT 118
D + P+ TY +I Y + E D ++E KR +PNV+TY +L+ T
Sbjct: 694 DGLCPNEVTYTALIDGYCKDEKLDTATS-------LLEHMKRSGCRPNVQTYNVLIHGLT 746
Query: 119 KYCAVTEAIRHFRALQNYEGG---TKVLHNEGNFGDPLSL--YLRALCREGRIIELLEAL 173
K N+ G KV+ EG F + ++ + LC+ G LE
Sbjct: 747 KQ-------------NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 793
Query: 174 EAMAKDNQPVPPRAMILSRKYRTL 197
M + Q P + S R L
Sbjct: 794 NKMIE--QGCLPNLLTYSSLIRAL 815
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ +AG +A++I E+E + +N L++C G + A F+ M+ E
Sbjct: 471 LISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQ--E 528
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ +I+ + + D+V+ L M+ + PN+ TY +L++C +
Sbjct: 529 KGLNPDVVTYSTLIECFGKT---DKVEMACSLFDEMIAE--GCSPNLVTYNILLDCLERS 583
Query: 121 CAVTEAIRHFRALQ 134
EA+ + L+
Sbjct: 584 GRTAEAVDLYAKLK 597
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G F +N L+S G + A FE +E +PD +YN +I +
Sbjct: 455 KMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSN--CQPDVISYNSLINCLGK 512
Query: 80 A----ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E++ R +++ E K L P+V TY+ L+ECF K
Sbjct: 513 NGDVDEAHMRFKEMQE---------KGLNPDVVTYSTLIECFGK 547
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G +NA+E+ +M G ++ L++ + G+ E A F++M
Sbjct: 457 LIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP--- 513
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
KPD YN V++ RA R +D EL+ M K PN T+ +L+ +
Sbjct: 514 --CKPDIFGYNAVLKGLCRAA---RWEDAGELISNMA--RKDCPPNEITFNILINSLCQK 566
Query: 121 CAVTEAIRHFRALQNY 136
V AI F + Y
Sbjct: 567 GLVDRAIEVFEQMPKY 582
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + +++ G T FN +++ + G + A FE M+ E KP T+N +I
Sbjct: 374 LSLISKVQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKMK--ESGCKPTASTFNTLI 431
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
+ Y + ++++ + LL MM+ D + LQPN +T +LV+ + + EA +Q
Sbjct: 432 KGYGK---IGKLEESSRLLEMMLRD-EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 487
Query: 135 NY 136
++
Sbjct: 488 SF 489
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C G AL EME G + T +N +++ C E A F M+ E +KP
Sbjct: 354 CDEGMKKEALIFQSEMEKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMK--EKGLKP 411
Query: 66 DTETYNCVIQAYTRAESYDRVQ-DVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
TYN ++ AY+R R+Q +V E L + + D QPN ++Y L+ + + ++
Sbjct: 412 TKVTYNILMDAYSR-----RLQPEVVESLLLEMHDLG-FQPNARSYNCLISAYGRQKKMS 465
Query: 125 E 125
E
Sbjct: 466 E 466
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
+AG+ + AL+I EM+ G + ++ A G AF +E+M +KPD
Sbjct: 302 QAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG--LKPD 359
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
YN ++ A+ +A D+ V E + + RL P ++TY +++ + K + +A
Sbjct: 360 IVIYNILVHAFCKAGRMDKALGVLENI-----EANRLLPTIETYTSILDGYVKGGNIQKA 414
Query: 127 IRHF 130
+ F
Sbjct: 415 LEVF 418
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ A + YEM G ++ ++ L+ G+ A F+ +E ED+ +P
Sbjct: 422 CKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLE--EDHYRP 479
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
D + +N +I + ++ D +V E MM+E K P+ TY +LVE
Sbjct: 480 DIDNFNALILGFCKSHRTDLSLEVFE---MMIE--KGYTPSETTYTILVE 524
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFEN-MEYG 59
++ CK G+ A+++ +ME +G A T +N L+ G + + M+ G
Sbjct: 138 LVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKG 197
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ P+ TY+ +++A + V + LL ++ K QPN+ +Y +L+ K
Sbjct: 198 ---LVPNAFTYSSLLEAAYKERG---VNEAMRLLDEIIA--KGGQPNLVSYNVLLTGLCK 249
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ EAIR F+ L + V+ ++ LR+LC EGR E E L M
Sbjct: 250 EGRIEEAIRLFKNLPSKGFSPNVV--------SYNILLRSLCYEGRWEEANELLAEM 298
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD +A E+ +EM G F +N +++ G E A E +
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG--LNA 524
Query: 66 DTETYNCVIQAYTRAESYDRVQDV-AELLGMMVEDHKRLQPNVKTYALLVECFT 118
DT TY ++ AY ++ D+ Q++ E+LG K LQP + T+ +L+ F
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLG------KGLQPTIVTFNVLMNGFC 572
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 16 EIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
E+ EM+ AG + +N L+ + G+P+ A F M++ +PD +YN ++
Sbjct: 479 EVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG--CEPDRASYNILVD 536
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQN 135
AY RA ++ + V E L + + P +K++ LL+ + T
Sbjct: 537 AYGRAGLHEDAEAVFEEL-----KQRGMSPTMKSHMLLLAAHARSGNATRC--------- 582
Query: 136 YEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAM 176
E LH G D +L L A R GR+ ++ L AM
Sbjct: 583 -EEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAM 624
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KA +++++ EM++ G + L++ A G+ E A FE M+
Sbjct: 429 MINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 488
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+PD YN +++AY+RA Q +E+ +M H +P+ +Y +LV+ + +
Sbjct: 489 H--EPDVYAYNALMEAYSRA---GLPQGASEIFSLM--QHMGCEPDRASYNILVDAYGR 540
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ GD S AL + M + G +N L+SC G+ E A ++ME +
Sbjct: 433 MISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDME--Q 490
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
+P +YN V+ + R+ D + M+E K +PN TY LL+E
Sbjct: 491 SGFRPTVISYNIVLLGLCKVR---RIDDAIGMFAEMIE--KGCRPNETTYILLIE 540
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G + A+++ EM A G + + +N ++ G+ E A ++ +PD
Sbjct: 231 GGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT--SKGCEPDVI 288
Query: 69 TYNCVIQAYTRAESYDRVQD-VAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAI 127
+YN +++A+ +D + VAE+ + +PN TY++L+ ++ + EAI
Sbjct: 289 SYNILLRAFLNQGKWDEGEKLVAEMFS------RGCEPNKVTYSILISSLCRFGRIDEAI 342
Query: 128 RHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
+ + E L + DPL + ALC+EGR+
Sbjct: 343 SVLKVMIEKE-----LTPDTYSYDPL---ISALCKEGRL 373
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CKAG +A+ + +M A+G M T +N L++ G A ++ M
Sbjct: 331 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMT--R 388
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
PD T++ +I Y R D D + M + R+QPNV T+++++ K
Sbjct: 389 LRCPPDVVTFSSLIDGYCRCGQLD---DALRIWSDMAQ--HRIQPNVYTFSIIIHSLCK 442
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 2 IAEDCKAG--DHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
+ C G D L + EM G +N LL A G+ + A F M
Sbjct: 210 VINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMN-- 267
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E + PD TY+ ++Q + + +R++ V+ELL M E L P++ +Y +L+E + +
Sbjct: 268 ESGIVPDINTYSYLVQTFGK---LNRLEKVSELLREM-ECGGNL-PDITSYNVLLEAYAE 322
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLY 156
++ EA+ FR +Q + N + L+LY
Sbjct: 323 LGSIKEAMGVFRQMQ----AAGCVANAATYSVLLNLY 355
>gi|384253024|gb|EIE26499.1| hypothetical protein COCSUDRAFT_59031 [Coccomyxa subellipsoidea
C-169]
Length = 431
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A EI +M G + +T H++ L+ CQA G E A TF+ M+ G + P T + N +
Sbjct: 52 AQEIFEDMVTNGIVPSTVHYHTLMDCQAKAGKAEEAIGTFKAMQQGG--LPPTTWSLNIL 109
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
+ A R R +++ E L + ++ +V T+ L+ F + + A + ++ +
Sbjct: 110 LSACARTRQPVRAKEIMEDL-----TSQGVKSDVMTWNTLLSAFARAKHIDGAYQVWQQM 164
Query: 134 QN 135
Q
Sbjct: 165 QQ 166
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMK 64
CK G S+A + + A G + F FN L+ + A + M +G +
Sbjct: 436 CKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG---VS 492
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TYN ++ +A Y +DV +M+E K PN+ TY +L E F K V
Sbjct: 493 PDVITYNSILNGLCKAGKY---EDVMGTFKLMME--KGCVPNIITYNILTESFCKARKVE 547
Query: 125 EAIRHFRALQN 135
EA+ +QN
Sbjct: 548 EALNLIEEMQN 558
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+A+G F +N ++S G+ + A FE ME KPD TYN +I +
Sbjct: 453 KMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASS--CKPDVITYNTLINCLGK 510
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
D A +L +++ K P+V TY+ L+ECF K V A F
Sbjct: 511 NGDLDE----AHILFKEMQE-KGYDPDVFTYSTLIECFGKSNKVDMACSLF 556
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ + G A + EMEA+ +N L++C G + A F+ M+ E
Sbjct: 469 MISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQ--E 526
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD TY+ +I+ + ++ ++V L M+ + PN+ TY +L++C +
Sbjct: 527 KGYDPDVFTYSTLIECFGKS---NKVDMACSLFDEMIAEG--CIPNIVTYNILLDCLERR 581
Query: 121 CAVTEAIRHFRALQ 134
EA +H+ ++
Sbjct: 582 GKTAEAHKHYETMK 595
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KAGD++ A ++ +M G +T FN L+S + EV+ + ++ M+
Sbjct: 256 MIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETN--YKEVS-SIYDQMQ--R 310
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KPD +Y+ +I+AY +A R ++ + M++ R P K+Y +L++ F
Sbjct: 311 TALKPDVVSYSLLIKAYGKAR---REEEALAVFEEMLDAGVR--PTRKSYNILIDAFAIS 365
Query: 121 CAVTEAIRHFRALQNY 136
V EA F+A++ +
Sbjct: 366 GLVEEAHTVFKAMRRH 381
>gi|340059641|emb|CCC54034.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 328
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 47 EVAFATFENMEYGEDYM--KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQ 104
E E ME G + KPD ETYN V++ + E+YD +V L + E +++++
Sbjct: 12 ETLLVILEEMELGINAFNSKPDVETYNIVLRYHVVKENYD---EVTRLFNSLYESYRQVR 68
Query: 105 PNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREG 164
PN TY ++ + + A R +++Q + H + + +YL A +
Sbjct: 69 PNADTYCWVLRAYCRMKDAEAATRLIQSMQKRRIPLVIQH----YHYLMQVYLEA--DDR 122
Query: 165 RIIELLEALEAMAKDN 180
RI+++ +L+ DN
Sbjct: 123 RIVDVFYSLQDGEVDN 138
>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 17/172 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPE-VAFATFENMEYGEDYMK 64
CK A+E+ +M G +N L++ G E A + + +G M
Sbjct: 281 CKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHG---MG 337
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P+T TYN ++ + +D V ++ +++ + P V TY +L+ KY +
Sbjct: 338 PNTVTYNTLLHSLCTHGYWDEVDEI-----LLIMNTTSQPPTVVTYNILINGLCKYGLLD 392
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
AI F + ++ ++ + L ALC+EG + E L L ++
Sbjct: 393 RAINFFDQMVSHNCLPDII--------TYNTLLAALCKEGMVDEALHLLHSL 436
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
++PD TYN ++ +A + V ELLG M++D QP+V T+ LV + K
Sbjct: 413 LQPDVYTYNTLLSGLCKAGDFSAVD---ELLGHMIDDG--CQPSVVTFGTLVHGYCKAGK 467
Query: 123 VTEAIRHFRAL 133
EA+R FR++
Sbjct: 468 TDEALRIFRSM 478
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
MEA G FN L+ Q G + A TF+ M + +KP TYN ++ +A
Sbjct: 279 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML--KRGVKPTVVTYNILVDGLCKA 336
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
R+++ L M+E + P+V TY+ L++ K + +A R A++
Sbjct: 337 RQEGRIKEAITLFDAMIEKGR--VPDVVTYSALIDGLGKAGKLDDARRLLGAME 388
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEV--AFATFENMEY 58
+++ C G S+A + M AG +N LL C + E+ A F+
Sbjct: 16 LLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLL--HGFCKVGELDEALKIFDGAV- 72
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
+ PD TYN +I + +A+ D Q +L MV ++ L P+V TY LV
Sbjct: 73 -KRGFVPDVVTYNALINGFCKADKLDEAQ---RILQRMVSEN--LVPDVVTYNSLVNGLC 126
Query: 119 KYCAVTEA 126
K V EA
Sbjct: 127 KNGRVDEA 134
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ CK G A+ + +M + G TTF ++ L+ E A ATF +ME +
Sbjct: 247 MVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDME--K 304
Query: 61 DYMKPDTETYNCVIQAYTRAESYD---RVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
D + PD YN ++ A+ + + ++ RV D E G + PN +T+ +++
Sbjct: 305 DGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHG--------IAPNSRTWNIILNKL 356
Query: 118 TKYCAVTEAIRHFRAL 133
EA R FR +
Sbjct: 357 ISLGKDDEAYRVFRRM 372
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD A E+ +EM G +N L++ G + A T +M+ +KP
Sbjct: 480 CKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAG--LKP 537
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
D TY +I A ++ DR D LL M+++ ++P + TY +L+ F
Sbjct: 538 DVYTYTTLIDALCKSGELDRAHD---LLQEMLDN--GIKPTIVTYNVLMNGF 584
>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Brachypodium distachyon]
Length = 795
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K GD SNA+ + ++ AG T N +L CG + A + F ++ + P
Sbjct: 496 KIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISS--LLPT 553
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TY ++ A + A +V + +L MVE K ++PN TY+++++ K +A
Sbjct: 554 MVTYTTLMDALSEA---GKVNTMLSILYEMVE--KGIKPNAITYSVVIKGLCKELRFHDA 608
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLS 154
I HF L N +H EG DP++
Sbjct: 609 I-HF--LDN-------MHGEGVNADPVT 626
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA C+ GD ++A+E+ EM G + F L+S G + A F+ M +
Sbjct: 446 LIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMI--D 503
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ P+ T+N +I+ Y R + V+ +L MV+ + L P+ TY L+
Sbjct: 504 SSVVPNEVTFNVMIEGYCRVGN---VRKAFQLYDQMVD--RGLTPDNYTYRSLISVL--- 555
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
C A++ + + E VL++ L+ + C+EGR+ E
Sbjct: 556 CLTLGAMKAKEFVDDLENNCVVLNSF-----SLTTLMYGFCKEGRLTE 598
>gi|356541205|ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Glycine max]
Length = 768
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLL-SCQATCGIPEVAFATFENMEYG 59
+I C+ G +A+ + E+ + F + +L+ +C T + E A F M+
Sbjct: 256 LITALCRLGKVDDAITVYEELNGSAHQPDRFTYTNLIQACSKTYRM-EDAIRIFNQMQ-- 312
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ +PDT YN ++ + +A +V + +L MV++ R P+ TY +L+
Sbjct: 313 SNGFRPDTLAYNSLLDGHFKAT---KVMEACQLFEKMVQEGVR--PSCWTYNILIHGL-- 365
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRIIELLEALEAM 176
R+ RA Y L +G F D + S+ + LC+EG++ E L+ +E M
Sbjct: 366 -------FRNGRAEAAYTMFCD-LKKKGQFVDGITYSIVVLQLCKEGQLEEALQLVEEM 416
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 22 EAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG-EDYMKPDTETYNCVIQAYTRA 80
E G T+ +N + G FA F+ M+ G + ++ PD TYN +I A R
Sbjct: 204 EKRGFSFDTWGYNVCIHAFGCWGDLATCFALFKEMKGGNKGFVAPDLCTYNSLITALCRL 263
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQN 135
D V E L QP+ TY L++ +K + +AIR F +Q+
Sbjct: 264 GKVDDAITVYEELNGSAH-----QPDRFTYTNLIQACSKTYRMEDAIRIFNQMQS 313
>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Vitis vinifera]
Length = 498
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 17/172 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPE-VAFATFENMEYGEDYMK 64
CK A+E+ +M G +N L++ G E A + + +G M
Sbjct: 190 CKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHG---MG 246
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P+T TYN ++ + +D V ++ +++ + P V TY +L+ KY +
Sbjct: 247 PNTVTYNTLLHSLCTHGYWDEVDEI-----LLIMNTTSQPPTVVTYNILINGLCKYGLLD 301
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
AI F + ++ ++ + L ALC+EG + E L L ++
Sbjct: 302 RAINFFDQMVSHNCLPDII--------TYNTLLAALCKEGMVDEALHLLHSL 345
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G A E+ + G + +N +++ G + A T E ME ++P
Sbjct: 253 CKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQME--SRGLRP 310
Query: 66 DTETYNCVIQAYTRAESYDRVQD-VAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
+ +N VI + + D+ ++ V +++G K + P+V+TY +L++ + + C +
Sbjct: 311 NCIAFNSVIDKFCEMQMIDKAEEWVKKMVG------KGIAPSVETYNILIDGYGRLCVFS 364
Query: 125 EAIRHFRALQNY-EGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPV 183
R F+ L+ E G K N ++G + LC++G+I+E L M + V
Sbjct: 365 ---RCFQILEEMEENGEK--PNVISYGS----LINCLCKDGKILEAEMVLRDMV--GRGV 413
Query: 184 PPRAMI 189
P A I
Sbjct: 414 LPNANI 419
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G+ N + M A G +N L+ A G+ A + +++ ++ + PD
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK--QNGIIPDVV 259
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+Y C++ +Y R+ + ++V ++ +R +PNV TY L++ + + EA+
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEV-----FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 314
Query: 129 HFRALQ 134
FR ++
Sbjct: 315 IFRQME 320
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 18/161 (11%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C A +A E+ M G + FN L+ G+ A F+ M + P
Sbjct: 388 CSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP--DKGCTP 445
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
++ TY+ +I +A D+ ++ +G HK P+ K Y LL EC + E
Sbjct: 446 NSITYSTIISGLAKATKLDQALELFNEMG-----HKGFNPD-KIYQLLAECLNDDDTIEE 499
Query: 126 AIRHFRALQNYE-GGTKVLHNEGNFGDPLSLYLRALCREGR 165
AI+ R LQ+ VL+N L LCR G+
Sbjct: 500 AIQTVRKLQDSGISPHTVLYNA---------ILLGLCRNGK 531
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ CK N + +ME G A +N L++ G+ E AF + +
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNS--FSS 320
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTY-ALLVE 115
M+P TYN ++ + YDR +DV L+ M+ L PN TY LLVE
Sbjct: 321 RGMEPGLLTYNAILYGLCKIGKYDRAKDV--LIEML---QLGLTPNAATYNTLLVE 371
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ CK N + +ME G A +N L++ G+ E AF + +
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNS--FSS 320
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTY-ALLVE 115
M+P TYN ++ + YDR +DV L+ M+ L PN TY LLVE
Sbjct: 321 RGMEPGLLTYNAILYGLCKIGKYDRAKDV--LIEML---QLGLTPNAATYNTLLVE 371
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G+ A+ + +M G + +N L+S G E F M +
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV--K 621
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR-LQPNVKTYALLVECFTK 119
++PDT TYN +I R D E + + E R L PNV TY ++++ + K
Sbjct: 622 QGIEPDTFTYNLLIHGMCRIGKLD------EAVNLWNECKSRDLVPNVYTYGVMIDGYCK 675
Query: 120 YCAVTEAIRHFRAL--QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+ E + F L QN E + V++N +RA CR G +E + + M
Sbjct: 676 ADKIEEGEKLFTELLTQNLELNS-VVYNT---------LIRAYCRNGNTVEAFKLHDDM- 724
Query: 178 KDNQPVPP 185
++ +PP
Sbjct: 725 -RSKGIPP 731
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 86/229 (37%), Gaps = 40/229 (17%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKA ALE+ +M+ A T +N L+ G A A F+ M E
Sbjct: 215 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEML--E 272
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
KPD TYN +I + +A + D V + + R PNV TY L+ K
Sbjct: 273 AGCKPDVYTYNILISGFCKAGNTDAACGVFDDM-----SSSRCSPNVVTYGTLISGLCKR 327
Query: 121 CAVTEAIRHFRALQN---------YEGGTKVLHNEGNFGDPLSLY--------------- 156
+T+A +++ ++ Y L G L+
Sbjct: 328 RQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRT 387
Query: 157 --LRALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIE 203
+ LC+ R+ E + A+ K+ P P Y +++S+ I+
Sbjct: 388 RLIFHLCKANRVDEAVSLFNAIRKEGMPHP-------YAYNSIISALIK 429
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+G +A+E +M+AAG ++ +N LL+ A G+ + A + F M +D +KP
Sbjct: 563 KSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMR--DDGLKPS 620
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYA------LLVECFTKY 120
N +I A+ + DR +DV + + L+P+V TY +LVE F K
Sbjct: 621 LLALNSLINAFGK----DR-RDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKV 675
Query: 121 CAVTE 125
+V E
Sbjct: 676 PSVYE 680
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I KAGD ALE ++ +G T ++ CG E A A FE M +
Sbjct: 277 IIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMR--D 334
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
+ ++P T YN +++ Y +A ++D ++ M + + PN +TY+LL++ +
Sbjct: 335 NGLQPRTRAYNALLRGYVKA---GLLRDAEFVVSEM--ERSGVLPNEQTYSLLIDAY 386
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C++GD S AL++ +ME A F ++ ++ G + A + F+ ME +K
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME--TKGIKS 261
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
TYN +++ +A ++ D A LL MV + + PNV T+ +L++ F K
Sbjct: 262 SVVTYNSLVRGLCKAGKWN---DGALLLKDMVS--REIVPNVITFNVLLDVFVK 310
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 26/203 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMK 64
CK G S+A + A G + F FN L+ + A ++M +G +
Sbjct: 409 CKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHG---VT 465
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TYN ++ +A + +DV E M++E K PN+ TY +L+E K VT
Sbjct: 466 PDVITYNSILNGLCKAA---KPEDVMETFKMIME--KGCLPNIITYNILIESLCKARKVT 520
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDNQP 182
EA+ ++ N G DP+S + C G + E + M + +
Sbjct: 521 EALDLLEEIR----------NRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRI 570
Query: 183 VPPRAMILSRKYRTLVSSWIEPL 205
A Y +++++ E L
Sbjct: 571 CHTVA-----TYNIMINAFSEKL 588
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G + A+E+ +ME ++ ++ G + AF F ME +
Sbjct: 337 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG--ITT 394
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TYN +I + A +D D A+LL M++ +++ PNV T+++L++ F K + E
Sbjct: 395 NIITYNILIGGFCNAGRWD---DGAKLLRDMIK--RKINPNVVTFSVLIDSFVKEGKLRE 449
Query: 126 A 126
A
Sbjct: 450 A 450
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ CK + A + EME N L+ + G + A A ++M
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM--AN 220
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KP TYN V++ + +D+ ++V + D + P+V+++ +L+ F +
Sbjct: 221 RGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM-----DQCSVAPDVRSFNILIGGFCRV 275
Query: 121 CAVTEAIRHFRALQN 135
V EA++ ++ +Q+
Sbjct: 276 GEVKEAVKFYKEMQH 290
>gi|293333002|ref|NP_001168049.1| uncharacterized protein LOC100381779 [Zea mays]
gi|223945693|gb|ACN26930.1| unknown [Zea mays]
gi|414871082|tpg|DAA49639.1| TPA: hypothetical protein ZEAMMB73_603879 [Zea mays]
Length = 582
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
KPD YN I + R D+ DV E MMV + + P++ TY L+ +K V
Sbjct: 365 KPDVTAYNIFINYFCRYGHLDQAIDVLE---MMVSE--KCFPDIVTYNTLLNAISKRGMV 419
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN-QP 182
EA+ F +++ E G +V+ N + AL + G II + + M D P
Sbjct: 420 QEALGIFHSIR--ENGCQVVRITYN------TLIDALAKRGDIINAMTLFDEMIVDGINP 471
Query: 183 --VPPRAMILSRKYRTLVSSWIEPLQEEAELGYEI 215
V ++I+ + + +E L + LG+E+
Sbjct: 472 DDVTYGSLIMGFCKKNMAKEALELLNQMLALGFEV 506
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
I CK G S+A + +ME G T +N L+ G F + + E
Sbjct: 474 FIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLI---MGLGSKNQIFEIYGLIDEMR 530
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
E + PD YN V+ + RV+D +L M++ K + PN+ ++++L++ F K
Sbjct: 531 ERGVSPDVSIYNNVLSSLCEG---GRVKDAPSVLDEMLQ--KGISPNISSFSILIKAFCK 585
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHN 145
C + F N G + L++
Sbjct: 586 ACDFSAVDEIFEIALNVCGHKEALYS 611
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 23/178 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+AG S LE+ EM G +N L+S G + A + M +D + P
Sbjct: 102 CRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMR--KDGLSP 159
Query: 66 DTETYNCVIQAYTR------AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D T+N I A A R + E+LG+ QPN+ TY L++ F K
Sbjct: 160 DVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLP-------QPNIITYNLMLGGFCK 212
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+ EA F ++ E L N ++ +++L L R G+++E L+ M
Sbjct: 213 EGMLEEARALFEKMKVSEN----LMNRESY----NIWLLGLVRIGKLLEAQLVLKEMV 262
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 109/254 (42%), Gaps = 35/254 (13%)
Query: 12 SNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYN 71
S+A E+ +M G FN L++ G E A E M E + PD TYN
Sbjct: 186 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERM-VSEFKVNPDNVTYN 244
Query: 72 CVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFR 131
+++A ++ R+ D+ ELL M ++ L PN TY LV + K ++ EA +
Sbjct: 245 TILKAMSKK---GRLSDLKELLLDMKKN--GLVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299
Query: 132 ALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRAMILS 191
++ T VL + + ++ + LC G + E LE ++AM + + P +
Sbjct: 300 LMKQ----TNVLPDLCTY----NILINGLCNAGSMREGLELMDAM--KSLKLQPDVVT-- 347
Query: 192 RKYRTLVSSWIE--------PLQEEAEL-GYEIDYIARYISEGGLTGERKR-WVPRRGKT 241
Y TL+ E L E+ E G + + + IS L E KR V R+ K
Sbjct: 348 --YNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKE 405
Query: 242 PLD-----PDAVGF 250
+D PD V +
Sbjct: 406 LVDMHGFSPDIVTY 419
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
+A H E+ EME AG +N L+ G A F+ M+ E PD
Sbjct: 227 QADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQ--EAGCTPD 284
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFTKYCAVT 124
T++ +++AY + YD V+ ++ D K +P+V TY L++ F +
Sbjct: 285 VVTFSTLLEAYGKHGCYDEVR-------LLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQ 337
Query: 125 EAIRHF 130
E+I F
Sbjct: 338 ESINLF 343
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 15 LEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVI 74
L + +M G +N LLS ++ G+ E A F M E + PD+ TYN ++
Sbjct: 165 LGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMN--EAGVVPDSITYNALV 222
Query: 75 QAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
Y +A DR + V ELL M + P+V Y +L+E + + A + F+ +Q
Sbjct: 223 DIYGQA---DRHEGVGELLREMEQAGN--APDVVAYNILIEAYGRAGKYRAAAKMFKQMQ 277
>gi|297736801|emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 29 TTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQD 88
TT +N+++ + G + TF+ M + MK DT+T+ C+I+ Y A + + +D
Sbjct: 355 TTSTYNNVIEAFSDVGDAKNMEYTFDQMR--AEGMKADTKTFCCLIRGYANAGLFHKAED 412
Query: 89 VAEL---LGMMVEDHKRLQPNVKTYALLVECFTK 119
+ E+ M + H QP+ TY+++VE + K
Sbjct: 413 LIEMERVFNRMKDKH--CQPDSTTYSIMVEAYKK 444
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 79/204 (38%), Gaps = 31/204 (15%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C +G+ ++AL I M G + + L+ E AF F M +
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV--D 523
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFT 118
D + P+ TY +I Y + E D ++E KR +PNV+TY +L+ T
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATS-------LLEHMKRSGCRPNVQTYNVLIHGLT 576
Query: 119 KYCAVTEAIRHFRALQNYEGG---TKVLHNEGNFGDPLSL--YLRALCREGRIIELLEAL 173
K N+ G KV+ EG F + ++ + LC+ G LE
Sbjct: 577 KQ-------------NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623
Query: 174 EAMAKDNQPVPPRAMILSRKYRTL 197
M + Q P + S R L
Sbjct: 624 NKMIE--QGCLPNLLTYSSLIRAL 645
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 14/174 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+AG A + EM+ G T +N L+ G PE A + M + KP
Sbjct: 71 CEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVNS-KP 129
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ T+N +I+A+ ++ ++ ++V ++ + P+V +Y L + F K +
Sbjct: 130 NDRTFNMLIKAWAHDKNPEKARNVISMM-----RAAGVGPDVVSYNTLAQLFAKLGKPWD 184
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
A +QN + NE +G ++ Y+ A G+I E L +E M D
Sbjct: 185 AENVITEMQN----VYLRPNERTYGIVINGYIAA----GQIDESLRLIERMKMD 230
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G S ALE++ ME AG ++ L++ AFA FE++ +D +KPD
Sbjct: 476 KIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVV--KDGLKPD 533
Query: 67 TETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
YN +I+A+ + DR ++ V E+ +R +P +T+ ++ F + +
Sbjct: 534 VVLYNNIIRAFCGMGNMDRAIRTVKEM------QKERHRPTTRTFMPIIHGFARSGDMRR 587
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEAL 173
A+ F ++ + G +H + L L L C+ + +E+L+ +
Sbjct: 588 ALEIFDMMR-WSGCIPTVHT----FNALILGLVEKCQMEKAVEILDEM 630
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM + TF +N L+ A G A + M+ ++ ++P
Sbjct: 685 CKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK--QEGVQP 742
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TY I A +A R + + ++ ++PN+KTY L+ + + +
Sbjct: 743 DIHTYTSFINACCKAGDMQRATKTIQEMEVV-----GVKPNIKTYTTLIHGWARASLPEK 797
Query: 126 AIRHFRALQN 135
A++ F+ +++
Sbjct: 798 ALKCFQEMKS 807
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
I CKAGD A + EME G + L+ A +PE A F+ M+
Sbjct: 750 FINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAG 809
Query: 61 DYMKPDTETYNCVIQA 76
+KPD Y+C++ +
Sbjct: 810 --LKPDKAVYHCLMTS 823
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 79/204 (38%), Gaps = 31/204 (15%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C +G+ ++AL I M G + + L+ E AF F M +
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV--D 523
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFT 118
D + P+ TY +I Y + E D ++E KR +PNV+TY +L+ T
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATS-------LLEHMKRSGCRPNVQTYNVLIHGLT 576
Query: 119 KYCAVTEAIRHFRALQNYEGG---TKVLHNEGNFGDPLSL--YLRALCREGRIIELLEAL 173
K N+ G KV+ EG F + ++ + LC+ G LE
Sbjct: 577 KQ-------------NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623
Query: 174 EAMAKDNQPVPPRAMILSRKYRTL 197
M + Q P + S R L
Sbjct: 624 NKMIE--QGCLPNLLTYSSLIRAL 645
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ + G A + +M A+ +N L++C G + A F+ M+ E
Sbjct: 469 MISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQ--E 526
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD TY+ +I+ + ++ D ++ L M+ E PNV TY +L++C ++
Sbjct: 527 KGYGPDVFTYSILIECFGKSNKVDMACNL--FLDMIAEG---CIPNVVTYNILLDCLERH 581
Query: 121 CAVTEAIRHFRALQ 134
EA +H+ ++
Sbjct: 582 GKTAEAHKHYETMK 595
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFAT--FENMEY 58
M+ C +G A+++ + M G +N + S A + +V+F T F+ M+
Sbjct: 399 MLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFS--ALGKLKQVSFITSLFDKMK- 455
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
+ + PD TYN +I +Y R D+ + E + + +P+V TY L+ C
Sbjct: 456 -ANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDM-----NASSCKPDVITYNSLINCLG 509
Query: 119 KYCAVTEAIRHFRALQ 134
K + EA F+ +Q
Sbjct: 510 KNGDLDEAHMLFKEMQ 525
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM--EY 58
+I CK G+ A+ I EMEAAG + + L+ G F NM E
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSG----EFDRAHNMLQEM 558
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
+ +KP TYN ++ + + RV+ +LL M+E K ++PNV TY L++
Sbjct: 559 LDKGIKPSIATYNVLMNGFCMS---GRVEGGKKLLEWMLE--KNVRPNVVTYNSLMK--- 610
Query: 119 KYC 121
+YC
Sbjct: 611 QYC 613
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
MEA G FN L+ Q G + A TF+ M + +KP TYN ++ +A
Sbjct: 389 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML--KRGVKPTVVTYNILVDGLCKA 446
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGT 140
R+++ L M+E + P+V TY+ L++ K + +A R A++
Sbjct: 447 RQEGRIKEAITLFDAMIEKGR--VPDVVTYSALIDGLGKAGKLDDARRLLGAME----AK 500
Query: 141 KVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+ N + +S LC ++ E LE AM
Sbjct: 501 GCIPNVYTYNSLIS----GLCGLDKVDEALELFVAMV 533
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 141/392 (35%), Gaps = 62/392 (15%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+++ C G S+A + M AG +N LL G + A F+ +
Sbjct: 91 LLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAV--K 148
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD TYN +I + +A+ D Q +L MV + L P+V TY LV K
Sbjct: 149 RGFVPDVVTYNALINGFCKADKLDEAQ---RILQRMVSES--LVPDVVTYNSLVNGLCKN 203
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLY---LRALCREGRIIE----LLEAL 173
V EA ++L + F + Y + LCRE R +E LLE +
Sbjct: 204 GRVDEA--------------RMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249
Query: 174 EAMAKDNQPVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYISEGGLTGERK- 232
V A+I VS ++ GYE + I GL E +
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309
Query: 233 ----RWVPRRGKTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEGPAVLG 288
K L+PDA+ + T F + G+ L+ +E V
Sbjct: 310 NEAFELFSGLVKHGLEPDAITY-------TVFIDGLCKAGRVEDALLMLKDMDEKGCVPD 362
Query: 289 DVSESDYV-------RVEERLKKLIKGPEQHVLKPKAAS--------------KMVVSEL 327
VS + + RV+E + L+ G E P A S K ++
Sbjct: 363 VVSHNAVINGLCKEKRVDEA-EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTF 421
Query: 328 KEELDAQGLPTDGTRNVLYQRVQKARRINRSR 359
KE L PT T N+L + KAR+ R +
Sbjct: 422 KEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453
>gi|384492050|gb|EIE83246.1| hypothetical protein RO3G_07951 [Rhizopus delemar RA 99-880]
Length = 731
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
GD +ALE+ +M + F ++ P+ A N+ Y E +KP+
Sbjct: 302 VGDLGSALEVIKDMFRLNQEPDIVTFTTFINSIFDTKTPKSA-EDMMNLLY-EMGVKPNI 359
Query: 68 ETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAI 127
T+N +I + R +++ + + L MM+ D+K L+P V T+ L++ + + + +A+
Sbjct: 360 YTFNSMINGWIRV---NKMSEAEKTLNMMMTDYKELKPTVHTFTNLIQGYIEQMNLNKAM 416
Query: 128 RHFRAL 133
+ F+ L
Sbjct: 417 KTFQTL 422
>gi|357110688|ref|XP_003557148.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Brachypodium distachyon]
Length = 1038
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M++ KAG H +A + M+ G M FN +++ AT G+ + A FE M+
Sbjct: 823 MLSFYGKAGRHQDASVLFTRMKEEGIMPGKISFNSMVNVYATSGLHDKAKFIFEEMQSSG 882
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELL 93
P++ TY +I+AYT SY + ++ +++
Sbjct: 883 QI--PESLTYLALIKAYTEGRSYSKAEEAIQMM 913
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+A G F +N ++S G+ + A FE M+ + KPD TYN +I +
Sbjct: 207 KMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMD--DSSCKPDVITYNSMINCLGK 264
Query: 80 AESYDRVQDVAELLGMMVED--HKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
D M+ +D K P+V TY++L+ECF K V A F
Sbjct: 265 NGDLDEAH-------MLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLF 310
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
MI+ + G A E+ EM+ + +N +++C G + A F++M E G
Sbjct: 223 MISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKG 282
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D PD TY+ +I+ + ++ ++V L M+ + PN+ TY +L++C +
Sbjct: 283 YD---PDVFTYSILIECFGKS---NKVDMACSLFDEMIA--QGCVPNIVTYNILLDCLER 334
Query: 120 YCAVTEAIRHFRALQ 134
+ EA + + L+
Sbjct: 335 HGKTREAHKLYETLK 349
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 30 TFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDV 89
T F+ L+ CG + A + F++M G Y+ P+ TYN ++ +A+ +R +
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAG-GYV-PNVITYNALVNGLCKADKMERAHAM 417
Query: 90 AELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNF 149
E MV+ K + P+V TY++LV+ F K V EA+ + + V+
Sbjct: 418 IE---SMVD--KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVV------ 466
Query: 150 GDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPR 186
+ + LC+ R E + + MA + VP +
Sbjct: 467 --TFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDK 501
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 15/165 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K GD S AL++ M + FN L++ G E A A FE M ++PD
Sbjct: 544 KLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV--AKNLQPD 601
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
T+ +I +A + +D+ +L+G + + PNV TY LV K + EA
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGNL-----GVPPNVVTYNALVHGLCKSGRIEEA 656
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLE 171
+ + + + + + +G + ALCR R + L+
Sbjct: 657 CQFLEEMVS----SGCVPDSITYGS----LVYALCRASRTDDALQ 693
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 30 TFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDV 89
T F+ L+ CG + A F++M G Y+ P+ TYN ++ + + +R +
Sbjct: 854 TVTFSTLIDGLCKCGQTDEACNVFDDMIAG-GYV-PNVVTYNVLMNGLCKTDKMERAHAM 911
Query: 90 AELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQN 135
E MV+ K + P+V TY++LV+ F K V EA+ + +
Sbjct: 912 IE---SMVD--KGVTPDVITYSVLVDAFCKASHVDEALELLHGMAS 952
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 24/145 (16%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+A +G ALE+ ME++G + FN LL+ + G E FE M
Sbjct: 281 MLAGFTASGCSERALELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMT-NS 339
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTY-ALLVECFTK 119
++PD Y C++ + RA +++ +++ +++ M +P+ + AL+ C
Sbjct: 340 SSIEPDIAHYGCMVDLFCRAGLFEKAEEMIQMMPM--------EPDAAVWKALVGAC--- 388
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLH 144
R N+E G K H
Sbjct: 389 -----------RTYSNFELGKKAGH 402
>gi|334188265|ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g48730, chloroplastic; Flags: Precursor
gi|332008334|gb|AED95717.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A E+ EM G + + L+S + G + AF E M+ + +PD TY+ +
Sbjct: 169 AHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHN-CQPDVHTYSIL 227
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFTK 119
I+++ + ++D+VQD ++ D +R ++PN TY L++ + K
Sbjct: 228 IKSFLQVFAFDKVQD-------LLSDMRRQGIRPNTITYNTLIDAYGK 268
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 15/180 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G+ A+++ +M +G TT N L+ G + A+ F M
Sbjct: 409 LIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKN 468
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ D TYN +IQ + R + D+ + L K LQP+ +YA L++ +
Sbjct: 469 --IVCDVITYNTLIQGFCREGKVLQSTDLLKEL-----QAKGLQPSTSSYAHLIQKLCQL 521
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+V EA + + N G ++ + + LC +G ++E +E L M K N
Sbjct: 522 GSVQEAKEMWNDMHN-RGLQPMVCTRDHI-------ISGLCEQGYVVEGMEWLITMLKSN 573
>gi|302821834|ref|XP_002992578.1| hypothetical protein SELMODRAFT_43484 [Selaginella moellendorffii]
gi|300139647|gb|EFJ06384.1| hypothetical protein SELMODRAFT_43484 [Selaginella moellendorffii]
Length = 427
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRM-ATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK 64
C AG A E+ EM+ G + A T ++ LL+ G + AF+ ++ M+ + +
Sbjct: 48 CDAGRIDEACEVFNEMQGRGGIEAKTAIYSVLLNGLLRSGKLDDAFSYYQMMQ---ETCQ 104
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD+ TY+ +I +R D VA+ MV+ K P++ + +E + V+
Sbjct: 105 PDSSTYSTMIYELSRQGRLDHATKVAQ---EMVDKDK--IPDMPCLGVALEILCRCGRVS 159
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNF---GDPLSLYLRALCREGRIIELLEALEAMAKDNQ 181
+A + R ++ E +F P + LR C GR+ E L+ E M + +
Sbjct: 160 DAWKLLRMMK-----------EKHFKPDAVPHTYVLRKFCEAGRLDEALKGFEEMTGNEK 208
Query: 182 PVP 184
P
Sbjct: 209 CEP 211
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C AGD ALE+ EM++AG F +++ A G + A +M G D P
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM--GCD---P 55
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY +I A+ RA+ ++++ +LL M E + PN+ TY +LV+ K V
Sbjct: 56 NVVTYTALIAAFARAK---KLEEAMKLLEEMRE--RGCPPNLVTYNVLVDALCKLSMVGA 110
Query: 126 A 126
A
Sbjct: 111 A 111
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 18/181 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C+ G A+E +M + G + +N +L+ G + A FE + GE
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKL--GE 419
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P+ +YN + A S D+++ + +L M+ + P+ TY L+ C +
Sbjct: 420 VGCPPNAGSYNTLFGAL--WSSGDKIRALGMILEML---SNGIDPDEITYNSLISCLCRD 474
Query: 121 CAVTEAIRHFRALQNYEGG--TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
V +AI + E T + +N L LC+ RII+ +E L AM
Sbjct: 475 GLVDQAIELLVDMFESEKCQPTVISYNT---------VLLGLCKVQRIIDAIEVLAAMVN 525
Query: 179 D 179
+
Sbjct: 526 E 526
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK GD A E+ EM ++G F FN L+ G A +E M
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD T+ +I Y R ++ + E + + + L PNV TYA+L+ K
Sbjct: 351 --CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKV-----RNLSPNVYTYAVLINALCKE 403
Query: 121 CAVTEAIRHFRALQNYE 137
+ EA R L++ E
Sbjct: 404 NRIREARNFLRHLKSSE 420
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G + A ++ EM AG FN L+ G E + M+
Sbjct: 328 CRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMK--RLGCPA 385
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
DT +YN +I+++ R E+ +++ A++L +MV+ K + PN T+ + C K V
Sbjct: 386 DTISYNFIIESHCRDEN---LEEAAKILNLMVK--KGVAPNASTFNFIFGCIAKLHDVNG 440
Query: 126 AIRHF 130
A R +
Sbjct: 441 AHRMY 445
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAGD + A + M+AAG F +N +++ G+ A + M+ ++ ++ D
Sbjct: 196 KAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMD--KEGIRAD 253
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
T T+N +I + Y RV++ A+L M + P+ TY L++ + + + EA
Sbjct: 254 TVTWNSLIHGLCK---YGRVKEAAQLFTEMAA--AQATPDNVTYTTLIDGYCRAGNIEEA 308
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
++ L+ T +L + + LR LC +G++ E+ + L M
Sbjct: 309 VK----LRGEMEATGMLPGVATY----NAILRKLCEDGKMKEVNQLLNEM 350
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK GD A E+ EM ++G F FN L+ G A +E M
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD T+ +I Y R ++ + E + + + L PNV TYA+L+ K
Sbjct: 351 --CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKV-----RNLSPNVYTYAVLINALCKE 403
Query: 121 CAVTEAIRHFRALQNYE 137
+ EA R L++ E
Sbjct: 404 NRIREARNFLRHLKSSE 420
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TYN V+ A +A + D+ + L MV +KR+ PN TY L+ ++
Sbjct: 218 PDLVTYNSVVHALCKARAMDKAE---AFLRQMV--NKRVLPNNWTYNNLIYGYSSTGQWK 272
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQ 181
EA+R F+ ++ + V+ LS+ + +LC+ G+I E + + MA Q
Sbjct: 273 EAVRVFKEMRRHSILPDVV--------TLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 321
>gi|242053243|ref|XP_002455767.1| hypothetical protein SORBIDRAFT_03g024580 [Sorghum bicolor]
gi|241927742|gb|EES00887.1| hypothetical protein SORBIDRAFT_03g024580 [Sorghum bicolor]
Length = 558
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 57 EYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVEC 116
E E +PD TYN ++ Y R R+QD L G+M ++R+ P++ ++ +L++
Sbjct: 233 ELEEQGFEPDVVTYNTLLAGYCRK---GRLQDALHLFGVM--PYRRVPPDLVSHTILMDG 287
Query: 117 FTKYCAVTEAIRHF-RALQNY--EGGTK-----VLHNEGNFGDPLSLYLRAL----CREG 164
K + EA R F R +Q Y EG K ++ G+ ++ LR + + G
Sbjct: 288 LCKAWRLNEARRMFDRMVQGYCNEGQLKEARSLLMEMAGSGLLDIAFALRVVIEGHVKFG 347
Query: 165 RIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIEPLQEEAELG 212
+++ L + + K +P S+ Y L+S+ E ++ A G
Sbjct: 348 KLLTCLNMVAPLRKYGIIIP------SQSYSCLISALCEDMRPNAARG 389
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 34/210 (16%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
++ C+ G A + M+ G T +N L+S A G + A E+M YG
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308
Query: 60 EDYMKPDTETYNCVIQAYTRAESYD---RVQDVAELLGMMVEDHKRLQPNVKTYALLVE- 115
+PD TYN + +A D R++D E L + P+V TY LV+
Sbjct: 309 ---FEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTAL-------PDVVTYNTLVDA 358
Query: 116 CFTKYCAVTEAIRHFRALQNYEG--GTKVLHNEGNFGDPLSLYLRALCREGRIIELLEAL 173
CF C+ ++A+R +++ +G T V HN + +++LC+EG++ E L L
Sbjct: 359 CFKWRCS-SDALRLLEEMRD-KGVKPTLVTHN---------IVVKSLCKEGKLEEALGKL 407
Query: 174 EAMAKDNQPVPPRAMILSRKYRTLVSSWIE 203
E +A++ + P + Y TL+ ++ +
Sbjct: 408 EKIAEEG--LAPDVIT----YNTLIDAYCK 431
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
++PD +Y I+A+ R + + V V L+ M +HK +PNV T+ +++ K
Sbjct: 365 LEPDVISYTAFIEAHCREKDFRNVDKV--LVQM---EHKGCKPNVITFTIIMHALGKAKQ 419
Query: 123 VTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP 182
+ EA++ + ++ EG + +F L + L + GR+ ++ E +E M K Q
Sbjct: 420 INEALKVYEKMKK-EGCVP----DSSFYSSL---IFILGKAGRLTDVKEIVEDMEK--QG 469
Query: 183 VPPRAMILSRKYRTLVSSWIEPLQEEAEL 211
V P + Y TL+S QEE L
Sbjct: 470 VTPDVLT----YNTLISCACAHSQEETAL 494
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG ++ EI +ME G +N L+SC E A ME E KPD
Sbjct: 451 KAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKME--EVSCKPD 508
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLV 114
+TY+ +++ + R + R++ + LL M ++ ++ TYA+LV
Sbjct: 509 LKTYHPLLKMFCRKK---RMKVLKFLLDHMFKNDVSIEAG--TYAILV 551
>gi|449469755|ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C G S AL + EME G + +N ++ + E A F M+
Sbjct: 335 LIKSFCDEGLKSQALILQLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMK--S 392
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQ-DVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP + ++N ++ AY+R R+Q ++ E L + ++D L+PNVK+Y L+ + +
Sbjct: 393 KGVKPTSASFNILMNAYSR-----RMQPEIVEKLLVEMKDMG-LEPNVKSYTCLISAYGR 446
>gi|356502612|ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 697
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G T+ + L+ + G+ E A+A FENM+ + +KP ETY ++ A+
Sbjct: 452 KMKKVGVKPTSQSYTALIHAYSVSGLHEKAYAAFENMQ--NEGIKPSIETYTTLLNAFRH 509
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
A Q + E+ +M+ + +++ T+ +LV+ F K EA
Sbjct: 510 A---GDAQTLMEIWKLMISE--KVEGTGATFNILVDGFAKQGLFMEA 551
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 29/184 (15%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEA-AGRMATTFHFNHLLSCQ-ATCGIPEVAFATFENMEY 58
+I AG H A+E ME G TTF +N +L A+ G +A A + M
Sbjct: 145 LIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVA 204
Query: 59 GEDYMKPDTETYNCVIQAYT-RAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
P+ TYN +I R D ++ E++ + + PNVKT+ +L+
Sbjct: 205 AG--CLPNRATYNVLIHGLCKRGTPVDALKLFDEMIS------RGITPNVKTHTILLSSM 256
Query: 118 TKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDP-----LSLYLRALCREGRIIELLEA 172
+ EA +LH+ + G P + +L LC+ GR+ E +E
Sbjct: 257 CNAGQLKEA-------------ENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIER 303
Query: 173 LEAM 176
LEA+
Sbjct: 304 LEAL 307
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG+++ AL + EME +G +N L A G E A + M + P+
Sbjct: 298 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT--SKGLLPN 355
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
T TYN V+ AY RV + L M ++ PNV TY L+ K
Sbjct: 356 TFTYNTVMTAYANV---GRVDEALALFDRMKKNG--YVPNVNTYNLIFGMLGK 403
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+A K G + M++ G + +N L+S CG AF ++ M
Sbjct: 432 MLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMI--S 489
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
P TYN ++ +R + Q + + M+++ +PN ++Y+LL++C+ K
Sbjct: 490 SGFTPCLTTYNALLNVLSRQGDWSTAQSI---VSKMLKNG--FKPNDQSYSLLLQCYAK 543
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 17/182 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+GD AL + EM+ G T F + L+ G E A++ F NM +D KPD
Sbjct: 249 KSGDEK-ALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNML--KDGCKPD 305
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVEC-FTKYCAVTE 125
N +I + +A R++D +L M + PNV TY +++ F +E
Sbjct: 306 VVLINNLINIFGKA---GRLEDALKLFDQM--RSLKCAPNVVTYNTVIKALFESKAPASE 360
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
A F ++ V + + S+ + C+ R+ + L LE M + P P
Sbjct: 361 AASWFEKMK----ANGVTPSSFTY----SILIDGFCKTNRVEKALLLLEEMDEKGFPPCP 412
Query: 186 RA 187
A
Sbjct: 413 AA 414
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG+++ AL + EME +G +N L A G E A + M + P+
Sbjct: 298 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT--SKGLLPN 355
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
T TYN V+ AY RV + L M ++ PNV TY L+ K
Sbjct: 356 TFTYNTVMTAYANV---GRVDEALALFDRMKKNG--YVPNVNTYNLIFGMLGK 403
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+A K G + M++ G + +N L+S CG AF ++ M
Sbjct: 432 MLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMI--S 489
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
P TYN ++ +R + Q + + M+++ +PN ++Y+LL++C+ K
Sbjct: 490 SGFTPCLTTYNALLNVLSRQGDWSTAQSI---VSKMLKNG--FKPNDQSYSLLLQCYAK 543
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 25/200 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK S A E+ EM G + F L++ + G A FE M + +KP
Sbjct: 318 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI--QRNLKP 375
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I + + ++V EL M+ +R+ PN +Y +L+ + V+E
Sbjct: 376 DVVTYNTLIDGFCKGSEMEKVN---ELWNDMIS--RRIYPNHISYGILINGYCNMGCVSE 430
Query: 126 AIRHFRAL--QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPV 183
A R + + + +E T + N ++ CR G ++ E L M + +
Sbjct: 431 AFRLWDEMVEKGFE-ATIITCNT---------IVKGYCRAGNAVKADEFLSNMLL--KGI 478
Query: 184 PPRAMILSRKYRTLVSSWIE 203
P + Y TL++ +I+
Sbjct: 479 VPDGI----TYNTLINGFIK 494
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C A NA + EM+ G + + + L+ C + GI + A + M
Sbjct: 495 VIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV--R 552
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D +P TY +I AY +A+ +V EL +M+ K PNV TY L++ + K
Sbjct: 553 DGCEPTVVTYTTLIHAYLKAK---KVSVANELFELMIA--KGCFPNVITYTALIDGYCK 606
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
++PD +Y I+A+ R + + V V L+ M +HK +PNV T+ +++ K
Sbjct: 342 LEPDVISYTAFIEAHCREKDFRNVDKV--LVQM---EHKGCKPNVITFTIIMHALGKAKQ 396
Query: 123 VTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP 182
+ EA++ + ++ EG + +F L + L + GR+ ++ E +E M K Q
Sbjct: 397 INEALKVYEKMKK-EGCVP----DSSFYSSL---IFILGKAGRLTDVKEIVEDMEK--QG 446
Query: 183 VPPRAMILSRKYRTLVSSWIEPLQEEAEL 211
V P + Y TL+S QEE L
Sbjct: 447 VTPDVLT----YNTLISCACAHSQEETAL 471
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG ++ EI +ME G +N L+SC E A ME E KPD
Sbjct: 428 KAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKME--EVSCKPD 485
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLV 114
+TY+ +++ + R + R++ + LL M ++ ++ TYA+LV
Sbjct: 486 LKTYHPLLKMFCRKK---RMKVLKFLLDHMFKNDVSIEAG--TYAILV 528
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 2 IAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YGE 60
+ +DCK + AL + Y + +G FN ++ G ++A ME
Sbjct: 248 LCKDCKLQE---ALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSA 304
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KP++ TYN +I + + +++ MM D ++PNV+TYA ++E +++
Sbjct: 305 GSIKPNSVTYNSLIDGFCKIGGITVAEELRN--EMMKID---IEPNVRTYATMIEGYSRA 359
Query: 121 CAVTEAIR---------------------HFRALQ-NYEGGTKVLHNEGNFGDPL----- 153
+ EA+R H+ ++ + +G + V + + PL
Sbjct: 360 GCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTC 419
Query: 154 SLYLRALCREGRIIELLEALEAMAKDN 180
S+ R LCR G I L+ L + ++N
Sbjct: 420 SILTRGLCRNGYITTALKFLNQVLENN 446
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
G AL + EM G +N L+SC G+ + A +ME KP
Sbjct: 419 TGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSV 478
Query: 68 ETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
+YN V+ + RV D E+L MV+ K +PN TY L+E
Sbjct: 479 VSYNIVLLGLCKVS---RVSDAIEVLAAMVD--KGCRPNETTYTFLIE 521
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 19/180 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA CK G A+E+ M + G + ++N +L+C + A + FE + GE
Sbjct: 342 LIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKL--GE 399
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVED-HKRLQPNVKTYALLVECFTK 119
P+ +YN + A R LGM++E K + P+ TY L+ C +
Sbjct: 400 VGCSPNASSYNSMFSALWSTGHKVRA------LGMILEMLDKGVDPDGITYNSLISCLCR 453
Query: 120 YCAVTEAIRHF--RALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
V EAI +++ E V+ ++ L LC+ R+ + +E L AM
Sbjct: 454 DGMVDEAIELLVDMEMESSECKPSVV--------SYNIVLLGLCKVSRVSDAIEVLAAMV 505
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 25/200 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK S A E+ EM G + F L++ + G A FE M + +KP
Sbjct: 475 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI--QRNLKP 532
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I + + ++V EL M+ +R+ PN +Y +L+ + V+E
Sbjct: 533 DVVTYNTLIDGFCKGSEMEKVN---ELWNDMIS--RRIYPNHISYGILINGYCNMGCVSE 587
Query: 126 AIRHFRAL--QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPV 183
A R + + + +E T + N ++ CR G ++ E L M + +
Sbjct: 588 AFRLWDEMVEKGFE-ATIITCNT---------IVKGYCRAGNAVKADEFLSNMLL--KGI 635
Query: 184 PPRAMILSRKYRTLVSSWIE 203
P + Y TL++ +I+
Sbjct: 636 VPDGI----TYNTLINGFIK 651
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 43/204 (21%)
Query: 30 TFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDV 89
T F+ L+ CG + A + F++M G Y+ P+ TYN ++ +A+ +R +
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAG-GYV-PNVITYNALVNGLCKADKMERAHAM 238
Query: 90 AELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGT-------KV 142
E MV+ K + P+V TY++LV+ F K V EA+ + + G T KV
Sbjct: 239 IE---SMVD--KGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS-RGCTPNVLVPDKV 292
Query: 143 LHN--------EGNFGDPLSLY------------------LRALCREGRIIELLEALEAM 176
N GNF +L+ + LC+ G++ + L+ M
Sbjct: 293 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 352
Query: 177 AKDNQPVPPRAMILSRKYRTLVSS 200
N VPP + + L S
Sbjct: 353 G--NLGVPPNVVTYNALVHGLCKS 374
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 23/192 (11%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTF-----HFNHLLSCQATCGIPEVAFATFENMEYGE 60
CKA ALE+ + M + G FN L++ G E A A FE M
Sbjct: 262 CKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMV--A 319
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++PD T+ +I +A + +D+ +L+G + + PNV TY LV K
Sbjct: 320 KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL-----GVPPNVVTYNALVHGLCKS 374
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI---IELLEALEAMA 177
+ EA + + + + + + +G + ALCR R ++L+ L++
Sbjct: 375 GRIEEACQFLEEMVS----SGCVPDSITYGS----LVYALCRASRTDDALQLVSELKSFG 426
Query: 178 KDNQPVPPRAMI 189
D V ++
Sbjct: 427 WDPDTVTYNILV 438
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 75/187 (40%), Gaps = 14/187 (7%)
Query: 6 CKAGDHSNALEIAY-EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK 64
C+AGD + ALEI EM G T +N +++ FE E E
Sbjct: 12 CRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFE--ELVERGHH 69
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TYN +I + +A +++ L G M + PNV TY++L+ K +
Sbjct: 70 PDVVTYNTLIDSLCKAGD---LEEARRLHGDM--SSRGCVPNVVTYSVLINGLCKVGRID 124
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
EA + + VL N + +L LC++ E E + ++ + V
Sbjct: 125 EARELIQEMTRKS--CDVLPNIITYNS----FLDGLCKQSMTAEACELMRSLRDGSLRVS 178
Query: 185 PRAMILS 191
P + S
Sbjct: 179 PDTVTFS 185
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
I CKAGD A + EMEAAG + L+ A +PE A + FE ++
Sbjct: 755 FINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAG 814
Query: 61 DYMKPDTETYNCVIQAY----TRAESY 83
+KPD Y+C++ + T AE+Y
Sbjct: 815 --LKPDKAVYHCLMTSLLSRATVAEAY 839
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM A TF +N L+ A G A + M ++ ++P
Sbjct: 690 CKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMN--QEGVQP 747
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TY I A +A R E + + ++PNVKTY L+ + +
Sbjct: 748 DIHTYTSFINACCKAGDMLRATKTMEEM-----EAAGVKPNVKTYTTLIHGWANASLPEK 802
Query: 126 AIRHFRALQ 134
A+ F L+
Sbjct: 803 ALSCFEELK 811
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 20/139 (14%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C G+H+ A ++ ++ME G T +F L+S G + A + M+ + +MKP
Sbjct: 249 CLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLHEMK--KRHMKP 306
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I + R D E+L M + N TY +LV+ F +
Sbjct: 307 DVVTYNILINYLCKE---GRAADAYEVLFEM--QVGGCEANAATYRMLVDGFCR------ 355
Query: 126 AIRHFRALQNYEGGTKVLH 144
+ ++EGG KVL+
Sbjct: 356 -------VGDFEGGLKVLN 367
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C A NA + EM+ G + + + L+ C + GI + A + M
Sbjct: 495 VIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV--R 552
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D +P TY +I AY +A+ +V EL +M+ K PNV TY L++ + K
Sbjct: 553 DGCEPTVVTYTTLIHAYLKAK---KVSVANELFELMIA--KGCFPNVITYTALIDGYCK 606
>gi|356569756|ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Glycine max]
Length = 1186
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 93/226 (41%), Gaps = 30/226 (13%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I++ C AG+ AL+++ EM G M + ++ CG + A + M GE
Sbjct: 943 VISKLCDAGNLKKALKLSQEMRLRGWMHDSSIQTSIVESLLLCGNIQGAETFLDRM--GE 1000
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ + PD Y+ +I+ + + + R+ L+ M++ H P +Y ++ F
Sbjct: 1001 ESLTPDDINYDYLIKCFCQ---HGRLNKAVHLMNTMLKKHN--IPVSTSYDFIIHGFCAQ 1055
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+ A+ + + ++ ++ D + + L C++G+ EL E
Sbjct: 1056 NKLDIALNFYSEMLSWNLKPRI--------DTVEMLLHRFCQDGK-TELAEQFLVDMSHG 1106
Query: 181 QPVPPRAMILSRKYRTLVSSW---------IEPLQEEAELGYEIDY 217
P R M Y T++ S+ E LQ E GY+ D+
Sbjct: 1107 GETPTRKM-----YCTVIKSYHMKKNLRKASELLQAMQENGYQPDF 1147
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+GD S AL++ +M+ A F ++ ++ G + A + F+ ME +K
Sbjct: 181 CKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME--TKGIKS 238
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
TYN ++ +A ++ D +LL M +++ PNV T+ +L++ F K + E
Sbjct: 239 SLVTYNSLVGGLCKAGKWN---DGVQLLKDMTS--RKIIPNVITFNVLIDVFVKEGKLQE 293
Query: 126 AIRHFRALQNYEGGTKVLH-NEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
A ++ E TK + N + + Y C + R+ E L+ M ++N
Sbjct: 294 ANELYK-----EMITKGISPNTITYNSLMDGY----CMQNRLSEANNMLDLMVRNN 340
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 15/180 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G+ A+++ +M +G TT N L+ G + A+ F M
Sbjct: 373 LIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKN 432
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ D TYN +IQ + R + D+ + L K LQP+ +YA L++ +
Sbjct: 433 --IVCDVITYNTLIQGFCREGKVLQSTDLLKEL-----QAKGLQPSTSSYAHLIQKLCQL 485
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+V EA + + N G ++ + + LC +G ++E +E L M K N
Sbjct: 486 GSVQEAKEMWNDMHN-RGLQPMVCTRDHI-------ISGLCEQGYVVEGMEWLITMLKSN 537
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G S ALE++ ME AG ++ L++ AFA FE++ +D +KPD
Sbjct: 455 KIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVV--KDGLKPD 512
Query: 67 TETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
YN +I+A+ + DR ++ V E+ +R +P +T+ ++ F + +
Sbjct: 513 VVLYNNIIRAFCGMGNMDRAIRTVKEM------QKERHRPTTRTFMPIIHGFARSGDMRR 566
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEAL 173
A+ F ++ + G +H + L L L C+ + +E+L+ +
Sbjct: 567 ALEIFDMMR-WSGCIPTVHT----FNALILGLVEKCQMEKAVEILDEM 609
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM + TF +N L+ A G A + M+ ++ ++P
Sbjct: 664 CKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK--QEGVQP 721
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TY I A +A R + + ++ ++PN+KTY L+ + + +
Sbjct: 722 DIHTYTSFINACCKAGDMQRATKTIQEMEVV-----GVKPNIKTYTTLIHGWARASLPEK 776
Query: 126 AIRHFRALQN 135
A++ F+ +++
Sbjct: 777 ALKCFQEMKS 786
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
I CKAGD A + EME G + L+ A +PE A F+ M+
Sbjct: 729 FINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAG 788
Query: 61 DYMKPDTETYNCVIQA 76
+KPD Y+C++ +
Sbjct: 789 --LKPDKAVYHCLMTS 802
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G T+ + L+ + G E A+A FENM+ + +KP ETY ++ A+ R
Sbjct: 470 KMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQ--REGIKPSIETYTALLDAFRR 527
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGG 139
A + + +L+ + R+ T+ LV+ F K+ EA N
Sbjct: 528 AGDTQTLMKIWKLMRRYKVEGTRV-----TFNTLVDGFAKHGHYKEARDVISKFANVGLH 582
Query: 140 TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
V+ ++ + A R G+ +L E LE MA N
Sbjct: 583 PTVM--------TYNMLMNAYARGGQHSKLPELLEEMAAHN 615
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ A E+ +EM G +N L++ G E A E M+ + P
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFF--P 530
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
DT TY ++ AY + + ELL +M++ K LQP + T+ +L+ F
Sbjct: 531 DTITYTTIMDAYCKMGEMAKAH---ELLRIMLD--KGLQPTIVTFNVLMNGF 577
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 79/204 (38%), Gaps = 31/204 (15%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C +G+ ++AL I M G + + L+ E AF F M +
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV--D 523
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFT 118
D + P+ TY +I Y + E D ++E KR +PNV+TY +L+ T
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATS-------LLEHMKRSGCRPNVQTYNVLIHGLT 576
Query: 119 KYCAVTEAIRHFRALQNYEGG---TKVLHNEGNFGDPLSL--YLRALCREGRIIELLEAL 173
K N+ G KV+ EG F + ++ + LC+ G LE
Sbjct: 577 KQ-------------NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623
Query: 174 EAMAKDNQPVPPRAMILSRKYRTL 197
M + Q P + S R L
Sbjct: 624 NKMIE--QGCLPNLLTYSSLIRAL 645
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ KA AL + EM AG T +N LL A G+ E A F++M+
Sbjct: 319 LISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMK--R 376
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D PD +Y ++ AY A + ++ L +PNV TY L++ + K
Sbjct: 377 DRCSPDICSYTTMLSAYVNASDMEGAENFFRRL-----KQDGFRPNVVTYGTLIKGYAKI 431
Query: 121 CAVTEAIRHFRALQ 134
+ + I+ + ++
Sbjct: 432 NNLEKMIKRYEEMK 445
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG++ A ++ EM A G TT +N L+S + EV+ ++ M+ ++PD
Sbjct: 258 KAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETN--YKEVS-KIYDQMQRAG--LQPD 312
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
+Y +I AY +A R ++ + M++ R P K Y +L++ F V +A
Sbjct: 313 VVSYALLISAYGKAR---REEEALAVFEEMLDAGIR--PTHKAYNILLDAFAISGMVEQA 367
Query: 127 IRHFRALQ 134
F++++
Sbjct: 368 KIVFKSMK 375
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TYN V+ A +A + D+ + L MV +KR+ PN TY L+ ++
Sbjct: 255 PDLVTYNSVVHALCKARAMDKAE---AFLRQMV--NKRVLPNNWTYNNLIYGYSSTGQWK 309
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQ 181
EA+R F+ ++ + V+ LS+ + +LC+ G+I E + + MA Q
Sbjct: 310 EAVRVFKEMRRHSILPDVV--------TLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 358
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 33/190 (17%)
Query: 31 FHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVA 90
+ FN L+ A CG+ + A F M + +KPD TY VI A R D D
Sbjct: 398 YTFNVLIKAYANCGMLDKAMIIFNEMR--DHGVKPDVVTYRTVIAALCRIGKMD---DAM 452
Query: 91 ELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFG 150
E M++ + + P+ Y L++ F + ++ +A + N +H + F
Sbjct: 453 EKFNQMID--QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN-----NGMHLDIVF- 504
Query: 151 DPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRAMILS----------------RKY 194
S + LC+ GR+++ + N + P A++ + R +
Sbjct: 505 --FSSIINNLCKLGRVMDAQNIFDLTV--NVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 560
Query: 195 RTLVSSWIEP 204
+VS+ IEP
Sbjct: 561 DAMVSAGIEP 570
>gi|302781494|ref|XP_002972521.1| hypothetical protein SELMODRAFT_52385 [Selaginella moellendorffii]
gi|300159988|gb|EFJ26607.1| hypothetical protein SELMODRAFT_52385 [Selaginella moellendorffii]
Length = 450
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRM-ATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK 64
C AG A E+ EM+ G + A T ++ LL+ G + AF+ ++ M+ + +
Sbjct: 51 CDAGRIDEACEVFNEMQGRGGIEAKTAIYSVLLNGLLRSGKLDDAFSYYQMMQ---ETCQ 107
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD+ TY+ +I +R D VA+ MV+ K P++ + +E + V+
Sbjct: 108 PDSSTYSTMIYELSRQGRLDHATKVAQ---EMVDKDK--IPDMPCLGVALEILCRCGRVS 162
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNF---GDPLSLYLRALCREGRIIELLEALEAMAKDNQ 181
+A + R ++ E +F P + LR C GR+ E L+ E M + +
Sbjct: 163 DAWKLLRMMK-----------EKHFKPDAVPHTYVLRKFCEAGRLDEALKGFEEMTGNEK 211
Query: 182 PVP 184
P
Sbjct: 212 CEP 214
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G F +N L+S G ++A FE +E + KPD +YN +I +
Sbjct: 463 KMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELENSD--CKPDVISYNSLINCLGK 520
Query: 80 A----ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
E++ R +++ E K L P+V TY+ L+ECF K V A R F
Sbjct: 521 NGDVDEAHMRFKEMQE---------KGLNPDVVTYSTLIECFGKTDKVEMACRLF 566
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ +AG A++ E+E + +N L++C G + A F+ M+ E
Sbjct: 479 LISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQ--E 536
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ +I+ + + D+V+ L M+ + PN+ TY +L++C +
Sbjct: 537 KGLNPDVVTYSTLIECFGKT---DKVEMACRLFDEMLAE--ECTPNLITYNILLDCLERS 591
Query: 121 CAVTEAIRHFRALQ 134
EA+ + L+
Sbjct: 592 GRTAEAVDLYAKLK 605
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ C AG + A+++ ++ G T +N + + +E M+ +
Sbjct: 409 MLESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMK--Q 466
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D PD TYN +I ++ RA D E L ++ +P+V +Y L+ C K
Sbjct: 467 DGPPPDIFTYNILISSFGRAGRVDIAVKFFEEL-----ENSDCKPDVISYNSLINCLGKN 521
Query: 121 CAVTEAIRHFRALQ 134
V EA F+ +Q
Sbjct: 522 GDVDEAHMRFKEMQ 535
>gi|27452908|gb|AAO15292.1| Putative callose synthase [Oryza sativa Japonica Group]
Length = 2055
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA CK GD A E+ EM +G + +N+LL C G A E ME E
Sbjct: 1846 LIAVKCKTGDFHGAREVFDEMRRSGFGPNSNSWNYLLGCLLKNGRVAEACELVEAMERSE 1905
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P++ TY I AY ++ R+ +L M + +L P + + ++ +
Sbjct: 1906 HNDIPNSLTYE--ILAYHACKA-GRMDSAMRILDQMFLE--KLTPRITIHTAFIKGYLYA 1960
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
+ +A R+ A+ + + SL + LC+ G I++
Sbjct: 1961 GRIDDACRYVSAMST--------RDRRSVNRNYSLLAKLLCKAGMIVD 2000
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C++G+ A E+ +EME G A ++ ++ + FE ++ E
Sbjct: 388 IIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLK--E 445
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVE-DHKRLQPNVKTYALLVECFTK 119
P +Y C+I Y ++ VA+ + + E + ++ N KTY++L+ F
Sbjct: 446 CCFTPSIISYGCLINLYV------KIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIH 499
Query: 120 YCAVTEAIRHF-RALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
T A R F L++ + ++N L + A C+ G + + LE M K
Sbjct: 500 LHDFTNAFRIFEEMLKSGLQPDRAIYN---------LLIEAFCKMGNMDRAIRILEKMQK 550
Query: 179 DNQPVPPRAM 188
+ RA
Sbjct: 551 ERMQPSNRAF 560
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM + TF +N L+ A G A + M+ ED + P
Sbjct: 673 CKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMK--EDGVPP 730
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY I A +A R Q V + + + L+PN+KTY L++ + +
Sbjct: 731 NIHTYTSYINACCKAGDMQRAQTVIDEMSDV-----GLKPNLKTYTTLIKGWARASLPDR 785
Query: 126 AIRHFRALQ 134
A++ F ++
Sbjct: 786 ALKCFEEMK 794
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ CK G A+ + +M + G TTF ++ L+ E A A F +ME +
Sbjct: 250 MVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDME--K 307
Query: 61 DYMKPDTETYNCVIQAYTRAESYD---RVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
D + PD YN +I A+ + + ++ RV D + G + PN +T+ +++
Sbjct: 308 DGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHG--------ISPNSRTWNIILNTL 359
Query: 118 TKYCAVTEAIRHFRAL 133
EA R FR++
Sbjct: 360 ISLGKDDEAYRVFRSM 375
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 10/134 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G + AL++ EM G + F N ++ G ++A TF M+
Sbjct: 644 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETF--MDMCR 701
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TYN +I Y +A D+ MM +P++ TY + + Y
Sbjct: 702 MGLSPDIVTYNTLIDGYCKAFDVGGADDL-----MMKMSDSGWEPDLTTYNIRIH---GY 753
Query: 121 CAVTEAIRHFRALQ 134
C V + R L+
Sbjct: 754 CTVRKINRAVMILE 767
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 27/203 (13%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G A+ +M AG T + +N L++ G A + F+ M +
Sbjct: 407 LIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMI--D 464
Query: 61 DYMKPDTETYNCVIQAYT-RAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP +Y +I Y + + ++ + E+ G K + PN T+ L+ +
Sbjct: 465 KGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG------KGIAPNTYTFTTLISALFR 518
Query: 120 YCAVTEAIRHFRAL--QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+T+A R F + QN ++ NE + ++ + C+EG ++ E L M
Sbjct: 519 ANRMTDAFRLFDEMLEQN------MMPNEVTY----NVMIEGHCKEGNTVKAFELLNQMV 568
Query: 178 KDNQPVPPRAMILSRKYRTLVSS 200
+ VP + YR L+SS
Sbjct: 569 QKGL-VPD-----TYTYRPLISS 585
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 70/178 (39%), Gaps = 15/178 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C G A + +EM G T+ F L+S AF F+ M E
Sbjct: 477 LISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEML--E 534
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
M P+ TYN +I+ + + + + ELL MV+ K L P+ TY L+
Sbjct: 535 QNMMPNEVTYNVMIEGHCKEGNTVKA---FELLNQMVQ--KGLVPDTYTYRPLISSLCST 589
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
V EA + L NE + S L C+EGR+ + L M K
Sbjct: 590 GRVCEAKKFIDDLHREHFKL----NEMCY----SALLHGYCKEGRLRDALGVCREMVK 639
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG+++ AL + EME +G +N L A G E A + M + P+
Sbjct: 207 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT--SKGLLPN 264
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
T TYN V+ AY RV + L M ++ PNV TY L+ K
Sbjct: 265 TFTYNTVMTAYANV---GRVDEALALFDRMKKNG--YVPNVNTYNLIFGMLGK 312
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+A K G + M++ G + +N L+S CG AF ++ M
Sbjct: 341 MLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMI--S 398
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
P TYN ++ +R + Q + + M+++ +PN ++Y+LL++C+ K
Sbjct: 399 SGFTPCLTTYNALLNVLSRQGDWSTAQSI---VSKMLKNG--FKPNDQSYSLLLQCYAK 452
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 119/313 (38%), Gaps = 56/313 (17%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYM-K 64
CK G A +I + M G +N L+ G A E++ ++ K
Sbjct: 67 CKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICK 126
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD ++N + +++ + D +V +G+M+ K PNV TY+ ++ F K +
Sbjct: 127 PDIVSFNSLFNGFSKMKMLD---EVFVYMGVML---KCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 125 EAIRHFRALQ------NYEGGTKVLHNEGNFGD---PLSLY------------------L 157
A++ F +++ N T ++ GD +SLY +
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 158 RALCREGRIIELLEALEAMAKDNQPVPPRAMILSRKYRTLVSSWIEP---------LQEE 208
C++G + E M +D V P +++ Y T++ + + L +
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDR--VEPNSLV----YTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 209 AELGYEIDYIARYISEGGLTGERK-----RWVPRRGKTPLDPDAVGFIYSNPMETSFKQR 263
G +D A + GL G K V K+ L PD V I++ M FK
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV--IFTTMMNAYFKSG 352
Query: 264 CLEDGKKYHRKLL 276
++ + KL+
Sbjct: 353 RMKAAVNMYHKLI 365
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATF-ENMEYG 59
+I CKAG A+ EM+ G A + L+ CG + A F E +E G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ P TYN +I+ + + ++++ +E+ M+E + ++PNV TY L++
Sbjct: 278 D---SPCAITYNTLIRGFCK---LGQLKEASEIFEFMIE--RGVRPNVYTYTGLIDGLCG 329
Query: 120 YCAVTEAIRHFR-ALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
EA++ ++ E V +N + + LC++G + + +E +E M K
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYN---------IIINKLCKDGLVADAVEIVELMKK 380
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK G + A + +M + + F +N LLS G + A+ FE M+
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++ PD ++N +I +A + + L+GM L P++ TY+ L+ F K
Sbjct: 560 NF--PDVVSFNIMIDGSLKAGDIKSAESL--LVGM---SRAGLSPDLFTYSKLINRFLKL 612
Query: 121 CAVTEAIRHF 130
+ EAI F
Sbjct: 613 GYLDEAISFF 622
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 12 SNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYN 71
S A + M G ++ N +L G + A + F M+ D + PD TYN
Sbjct: 94 SFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYN 153
Query: 72 CVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAI 127
++ + +A+ R+ + A +L ++ +PN+ TY++L++C+ K V E +
Sbjct: 154 TLVNGFCKAK---RLAE-ARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGL 205
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G+ L + EME G A F ++ L+S G E F+ M + P
Sbjct: 196 CKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEML--RRKVSP 253
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY+C++Q R R ++ +E+L M + ++P+V Y +L + K +
Sbjct: 254 NVVTYSCLMQGLGRT---GRWREASEMLKDMTA--RGVRPDVVAYTVLADGLCKNGRAGD 308
Query: 126 AIRHFRAL-QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQ 181
AI+ + Q E + +N + + LC+E R+ + +E M K +
Sbjct: 309 AIKVLDLMVQKGEEPGTLTYN---------VVVNGLCKEDRMDDAFGVVEMMVKKGK 356
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 12 SNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYN 71
S+ ++ +M+ G + F +N L+S G A FE +E + KPD +YN
Sbjct: 301 SHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSD--CKPDIISYN 358
Query: 72 CVIQAYTRA----ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAI 127
+I + E++ R +++ E K L P+V TY+ L+ECF K V A
Sbjct: 359 SLINCLGKNGDLDEAHIRFREMQE---------KGLNPDVVTYSTLIECFGKTDKVEMAC 409
Query: 128 RHF 130
R F
Sbjct: 410 RLF 412
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ +AG A++I E+E + +N L++C G + A F M+ E
Sbjct: 325 LISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQ--E 382
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ +I+ + + D+V+ L M+ + PN+ TY +L++C +
Sbjct: 383 KGLNPDVVTYSTLIECFGKT---DKVEMACRLFDEMLAEG--CFPNIVTYNILLDCLERS 437
Query: 121 CAVTEAIRHFRALQ 134
EA+ + L+
Sbjct: 438 GRTAEAVDLYAKLK 451
>gi|224101979|ref|XP_002312498.1| predicted protein [Populus trichocarpa]
gi|222852318|gb|EEE89865.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 76/184 (41%), Gaps = 15/184 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G +S A + +EMEA G ++ ++S G P A M+ +P
Sbjct: 220 CRVGLYSKAEVVFFEMEAKGFDKCVVAYSSIISMYGKTGRPRDAMRLVAKMKLKG--CQP 277
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+T YN ++ + RA+ RV+ + + + +++ P+ TY ++ ++K
Sbjct: 278 NTWIYNSLVDMHGRAKDLRRVEKLWKEM-----KRRKVAPDKVTYTSIISAYSKSKEYEM 332
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
+R F Y V+ G + + + RI ELL+ L M + P+
Sbjct: 333 CVRFF---HEYRINGGVID-----GAIAGIMVGVFSKISRIDELLKLLRDMKSEGAPIDE 384
Query: 186 RAMI 189
R +
Sbjct: 385 RLYV 388
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 19/165 (11%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A E+ EM+ AG + +N L+ + G+P+ A F M++ +PD +YN +
Sbjct: 334 AEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG--CEPDRASYNIL 391
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
+ AY RA ++ + V E L + + P +K++ LL+ + T
Sbjct: 392 VDAYGRAGLHEDAEAVFEEL-----KQRGMSPTMKSHMLLLAAHARSGNATRC------- 439
Query: 134 QNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAM 176
E LH G D +L L A R GR+ ++ AM
Sbjct: 440 ---EEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAM 481
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KA +++++ EM++ G + L++ A G+ E A FE M+
Sbjct: 286 MINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 345
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+PD YN +++AY+RA Q +E+ +M H +P+ +Y +LV+ + +
Sbjct: 346 H--EPDVYAYNALMEAYSRA---GLPQGASEIFSLM--QHMGCEPDRASYNILVDAYGR 397
>gi|224098475|ref|XP_002334555.1| predicted protein [Populus trichocarpa]
gi|222873072|gb|EEF10203.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G A ++ M G + F ++ LL G AF F M+
Sbjct: 70 LIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQ--S 127
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KPD YN ++ A ++ + ++D EL + K LQPNV+ Y ++ K
Sbjct: 128 SSLKPDLVMYNILVDAMCKSGN---LKDARELFSELFV--KGLQPNVQIYTTIINGLCKE 182
Query: 121 CAVTEAIRHFRALQ 134
+ EA+ FR ++
Sbjct: 183 GLLDEALEAFRNME 196
>gi|388851710|emb|CCF54706.1| uncharacterized protein [Ustilago hordei]
Length = 1372
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDY-MKPDTETYNCVIQAYTR 79
M AAG + LL+C G+ + A F M+ D ++P E N +++AY
Sbjct: 741 MIAAGVTPDRITYAALLNCYVESGLYDAAIRLFAWMKSHRDVRLRPTIEICNIILKAYVL 800
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE--CFTKYCAV-----TEAIRHFRA 132
S VQ V EL+G + E L PN TYAL+++ C + TEA R +
Sbjct: 801 --SSMPVQKVMELVGKVRE--MGLNPNTNTYALMLQSACDAGLMHLAEEIFTEAERALPS 856
Query: 133 LQ--NYEGGTKVLH 144
L YE G + H
Sbjct: 857 LTGVGYEQGANLYH 870
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 17/165 (10%)
Query: 2 IAEDCKAGD-HSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+ C+ G + A E+ EM+AAG +N LL P A + ME
Sbjct: 297 LISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEME--A 354
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P TYN +I AY R D + EL MV+ K ++P+V TY L+ F K
Sbjct: 355 SGFAPSIVTYNSLISAYARDGLLD---EAMELKSQMVK--KGIKPDVFTYTTLLSGFEKT 409
Query: 121 CAVTEAIRHFRALQ---------NYEGGTKVLHNEGNFGDPLSLY 156
A++ F ++ + K+ N GNF + + ++
Sbjct: 410 GKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVF 454
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
EM+ AG + FN L+S + CG + A A + M + + PD TYN V+ A R
Sbjct: 491 EMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML--DAGVTPDLSTYNAVLAALAR 548
Query: 80 AESYDRVQDV-AELLGMMVEDHKRLQPNVKTYALLVECF 117
+++ + V AE+ R +PN TY L+ +
Sbjct: 549 GGLWEQSEKVLAEM------KDGRCKPNELTYCSLLHAY 581
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TYN V+ A +A + D+ + L MV +KR+ PN TY L+ ++
Sbjct: 252 PDLVTYNSVVHALCKARAMDKAE---AFLRQMV--NKRVLPNNWTYNNLIYGYSSTGQWK 306
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQ 181
EA+R F+ ++ + V+ LS+ + +LC+ G+I E + + MA Q
Sbjct: 307 EAVRVFKEMRRHSILPDVV--------TLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 355
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 33/190 (17%)
Query: 31 FHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVA 90
+ FN L+ A CG+ + A F M + +KPD TY VI A R D D
Sbjct: 395 YTFNVLIKAYANCGMLDKAMIIFNEMR--DHGVKPDVVTYRTVIAALCRIGKMD---DAM 449
Query: 91 ELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFG 150
E M++ + + P+ Y L++ F + ++ +A + N +H + F
Sbjct: 450 EKFNQMID--QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN-----NGMHLDIVF- 501
Query: 151 DPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRAMILS----------------RKY 194
S + LC+ GR+++ + N + P A++ S R +
Sbjct: 502 --FSSIINNLCKLGRVMDAQNIFDLTV--NVGLHPDAVVYSMLMDGYCLVGKMEKALRVF 557
Query: 195 RTLVSSWIEP 204
+VS+ IEP
Sbjct: 558 DAMVSAGIEP 567
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 17/165 (10%)
Query: 2 IAEDCKAGD-HSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+ C+ G + A E+ EM+AAG +N LL P A + ME
Sbjct: 297 LISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASG 356
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P TYN +I AY R D + EL MV+ K ++P+V TY L+ F K
Sbjct: 357 --FAPSIVTYNSLISAYARDGLLD---EAMELKSQMVK--KGIKPDVFTYTTLLSGFEKT 409
Query: 121 CAVTEAIRHFRALQ---------NYEGGTKVLHNEGNFGDPLSLY 156
A++ F ++ + K+ N GNF + + ++
Sbjct: 410 GKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVF 454
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
EM+ AG + FN L+S + CG + A A + M + + PD TYN V+ A R
Sbjct: 491 EMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML--DAGVTPDLSTYNAVLAALAR 548
Query: 80 AESYDRVQDV-AELLGMMVEDHKRLQPNVKTYALLVECF 117
+++ + V AE+ R +PN TY L+ +
Sbjct: 549 GGLWEQSEKVLAEM------KDGRCKPNELTYCSLLHAY 581
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI C+ GD A ME G +N L+ + C + E+ A E +
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI--RRFCELGEMENAEKEVNKMKL 452
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ P ETYN +I Y R +D+ D+ + + ED+ + PNV +Y L+ C K
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEM----EDNGTM-PNVVSYGTLINCLCKG 507
Query: 121 CAVTEA 126
+ EA
Sbjct: 508 SKLLEA 513
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 7 KAGDHSNALEIAYEMEAAGRMA-TTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMK 64
KAG+ +AL++ Y++ + + T + L+ + G A FE M +YG +
Sbjct: 869 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYG---CR 925
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P+ YN +I + +A D L MV++ R P++KTY++LV+C V
Sbjct: 926 PNCAIYNILINGFGKAGEADAA---CALFKRMVKEGVR--PDLKTYSVLVDCLCMVGRVD 980
Query: 125 EAIRHFRALQ 134
E + +FR L+
Sbjct: 981 EGLHYFRELK 990
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATF-ENMEYG 59
+I CKAG A+ EM+ G A + L+ CG + A F E +E G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ P TYN +I+ + + ++++ +E+ M+E + ++PNV TY L++
Sbjct: 278 D---SPCAITYNTLIRGFCK---LGQLKEASEIFEFMIE--RGVRPNVYTYTGLIDGLCG 329
Query: 120 YCAVTEAIRHFR-ALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
EA++ ++ E V +N + + LC++G + + +E +E M K
Sbjct: 330 VGKTKEALQPLNLMIEKDEEPNAVTYN---------IIINKLCKDGLVADAVEIVELMKK 380
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK G + A + +M + + F +N LLS G + A+ FE M+
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++ PD ++N +I +A + + L+GM L P++ TY+ L+ F K
Sbjct: 560 NF--PDVVSFNIMIDGSLKAGDIKSAESL--LVGM---SRAGLSPDLFTYSKLINRFLKL 612
Query: 121 CAVTEAIRHF 130
+ EAI F
Sbjct: 613 GYLDEAISFF 622
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TYN V+ A +A + D+ + L MV +KR+ PN TY L+ ++
Sbjct: 265 PDLVTYNSVVHALCKARAMDKAE---AFLRQMV--NKRVLPNNWTYNNLIYGYSSTGQWK 319
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQ 181
EA+R F+ ++ + V+ LS+ + +LC+ G+I E + + MA Q
Sbjct: 320 EAVRVFKEMRRHSILPDVV--------TLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 368
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 33/190 (17%)
Query: 31 FHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVA 90
+ FN L+ A CG+ + A F M + +KPD TY VI A R D D
Sbjct: 408 YTFNVLIKAYANCGMLDKAMIIFNEMR--DHGVKPDVVTYRTVIAALCRIGKMD---DAM 462
Query: 91 ELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFG 150
E M++ + + P+ Y L++ F + ++ +A + N +H + F
Sbjct: 463 EKFNQMID--QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN-----NGMHLDIVF- 514
Query: 151 DPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRAMILS----------------RKY 194
S + LC+ GR+++ + N + P A++ S R +
Sbjct: 515 --FSSIINNLCKLGRVMDAQNIFDLTV--NVGLHPDAVVYSMLMDGYCLVGKMEKALRVF 570
Query: 195 RTLVSSWIEP 204
+VS+ IEP
Sbjct: 571 DAMVSAGIEP 580
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G + F +N ++S G+ + A FE ME KPD TYN +I +
Sbjct: 453 KMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASS--CKPDVVTYNSLINCLGK 510
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
D A +L +++ K P+V TY++L+ECF K V A F
Sbjct: 511 HGDLDE----AHMLFKEMQE-KGYDPDVFTYSILIECFGKSNKVEMACSLF 556
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFAT--FENMEY 58
M+ C A A+++ + M G + +N + S A + +V+F + F+ M+
Sbjct: 399 MLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFS--ALGKLKQVSFISNLFDKMK- 455
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
+ + PD TYN +I +Y R D+ ++ E++ + +P+V TY L+ C
Sbjct: 456 -TNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM-----EASSCKPDVVTYNSLINCLG 509
Query: 119 KYCAVTEAIRHFRALQ 134
K+ + EA F+ +Q
Sbjct: 510 KHGDLDEAHMLFKEMQ 525
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
MI+ + G A E+ MEA+ +N L++C G + A F+ M E G
Sbjct: 469 MISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKG 528
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D PD TY+ +I+ + ++ ++V+ L M+ + PN+ TY +L++C +
Sbjct: 529 YD---PDVFTYSILIECFGKS---NKVEMACSLFDEMISEG--CTPNIVTYNILLDCLER 580
Query: 120 YCAVTEAIRHFRALQ 134
EA + + ++
Sbjct: 581 RGKTEEAHKLYETMK 595
>gi|297839599|ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 459
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 22 EAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAE 81
E + TT L+ C G + A ATF M+ E + KPD YN +I A R
Sbjct: 157 ENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMK--EYHCKPDVYAYNTIINALCRVG 214
Query: 82 SYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++ + + LL M R P+ TY +L+ + +Y
Sbjct: 215 NFKKAR---FLLDQMQLPGFRYPPDTYTYTILISSYCRY 250
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 18/177 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEV--AFATFENMEYGEDYM 63
C+ G A E+ +ME+ G + +N L++ C EV F+ ++ D
Sbjct: 189 CRVGGVDRAFEVFKDMESFGCLPDVVTYNTLIN--GLCKANEVQRGCELFKEIQSRSD-C 245
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
PD TY +I + ++ ++++ + L M+ +QPNV T+ +L++ F K +
Sbjct: 246 SPDIVTYTSIISGFCKS---GKMKEASNLFEEMMRSG--IQPNVITFNVLIDGFGKIGNI 300
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
EA +R + ++ V+ + + CR G++ L+ M N
Sbjct: 301 AEAEAMYRKMAYFDCSADVV--------TFTSLIDGYCRAGQVNHGLKFWNVMKTRN 349
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMK 64
CK G S+A I + A G + F FN L+ + A + M +G +
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG---IT 493
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TYN ++ +A D V D + M+E K PN+ TY +L+E F K V+
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFK---AMLE--KGCTPNIITYNILIESFCKDRKVS 548
Query: 125 EAIRHFRALQ 134
EA+ F+ ++
Sbjct: 549 EAMELFKEMK 558
>gi|326507498|dbj|BAK03142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1043
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YGEDYMKP 65
KAG H +A + M+ G M FN +++ AT G+ + A F+ M +G+ P
Sbjct: 833 KAGRHQDASLLFNRMKEQGIMPGKISFNSMINAYATSGLHDDAEIVFQEMHSHGQ---VP 889
Query: 66 DTETYNCVIQAYTRAESYDRVQD-VAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
D+ TY +I+AY+ + Y + ++ + +LG + P+ ++ L+ F +
Sbjct: 890 DSMTYLALIRAYSESRCYSKAEETIQNMLG------SGITPSCPHFSHLIFAFLTEGQID 943
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
EA R +Q E G V + ++ +RA GR+ E + E +
Sbjct: 944 EAQRICSQMQ--EIGVAV-----DLACCRAM-MRAYLEHGRVEEGISLFET---TRGSLK 992
Query: 185 PRAMILSRKYRTLVSSWIEP 204
P + ILS + S EP
Sbjct: 993 PDSFILSAAFHLYEHSGREP 1012
>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
Length = 461
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 44 GIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRL 103
G P+ A+AT+ M + + PD TY+ +I A +A++ D+ E+L MV++ +
Sbjct: 206 GDPDKAYATYHEMF--DQGILPDVVTYSSIIAALCKAQAMDKAM---EVLNTMVKNG--V 258
Query: 104 QPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLS--LYLRALC 161
PN +TY +V + +TEAI G K++ ++G D ++ L + LC
Sbjct: 259 MPNCRTYNSIVHGYCSSGQLTEAI----------GFLKMMCSDGVEPDVVTCNLLMDYLC 308
Query: 162 REGRIIELLEALEAMAK 178
+ R E + +M K
Sbjct: 309 KNRRCTEARKIFNSMTK 325
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+++ C+ GD S A ++ EME G + + L+ A E A +ME E
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME--E 436
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ +I + ++ + + L MVE K L+PN Y ++ + K
Sbjct: 437 LGLVPDVHTYSVLIHGFCIK---GQMNEASRLFKSMVE--KMLEPNEVIYNTMILGYCKE 491
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ A+R FR ++ E V S +R LC+E ++ E + +E M
Sbjct: 492 GSSYRALRLFRDMEEKELAPNV--------ASYSYLIRVLCKERKLKEAEDLVEKM 539
>gi|297808589|ref|XP_002872178.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318015|gb|EFH48437.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 17 IAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQA 76
I E+E +G + FN +++ + G E A M+ E + P T TYN +I+
Sbjct: 96 IVSEVEQSGTKPDSIFFNAVINAFSESGNMEDAVQALLKMK--ELGLNPTTSTYNTLIKG 153
Query: 77 YTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
Y A +R + +L M+ E + ++PN++T+ +LV+ + K V EA
Sbjct: 154 YGIAGKPERSSALLDL--MLEESNVDVRPNIRTFNVLVQAWCKKKKVEEA 201
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMKPD 66
+G+ +A++ +M+ G TT +N L+ G PE + A + M E ++P+
Sbjct: 122 SGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSALLDLMLEESNVDVRPN 181
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
T+N ++QA+ + + +V++ E++ M E R P+ TY + C+ + A
Sbjct: 182 IRTFNVLVQAWCKKK---KVEEAWEVVHKMEECGVR--PDTVTYNTIATCYVQKGETVRA 236
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
++ K N G + + CREGR+
Sbjct: 237 --ESEVVEKMVMKEKAKPN----GRTCGIVVGGYCREGRV 270
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G+ A+ + +M G + +N L+S G E F M +
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV--K 554
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR-LQPNVKTYALLVECFTK 119
++PDT TYN +I R D E + + E R L PNV TY ++++ + K
Sbjct: 555 QGIEPDTFTYNLLIHGMCRIGKLD------EAVNLWNECKSRDLVPNVYTYGVMIDGYCK 608
Query: 120 YCAVTEAIRHFRAL--QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+ E + F L QN E + V++N +RA CR G +E + + M
Sbjct: 609 ADKIEEGEKLFTELLTQNLELNS-VVYNT---------LIRAYCRNGNTVEAFKLHDDM- 657
Query: 178 KDNQPVPP 185
++ +PP
Sbjct: 658 -RSKGIPP 664
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKA ALE+ +M+ A T +N L+ G E A A F+ M E KP
Sbjct: 453 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML--EAGCKP 510
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I + +A + D V + + R NV TY L+ K +T+
Sbjct: 511 DVYTYNILISGFCKAGNTDAACGVFDDM-----SSSRCSANVVTYGALISGLCKRRQLTK 565
Query: 126 AIRHFRALQ 134
A +F+ ++
Sbjct: 566 ASLYFQHMK 574
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 15/176 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G A+E+ +M A G + +++ C I E A + GE
Sbjct: 198 LINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIIN--GLCKIGETVAAAGLFRKMGE 255
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD TY+ +I + + RV + ++ M K + PN+ TY L++ +
Sbjct: 256 AGCQPDVVTYSTIIDSLCKDR---RVNEALDIFSYM--KAKGISPNIFTYNSLIQGLCNF 310
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
EA A+ N ++ N F SL + C+EG + E L+ M
Sbjct: 311 SRWREA----SAMLNEMMSLNIMPNIVTF----SLLINIFCKEGNVFEARGVLKTM 358
>gi|11079488|gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thaliana]
Length = 410
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 22 EAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAE 81
E + TT L+ C G + A ATF M+ E + KPD YN +I A R
Sbjct: 157 ENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMK--EYHCKPDVYAYNTIINALCRVG 214
Query: 82 SYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++ + + LL M R P+ TY +L+ + +Y
Sbjct: 215 NFKKARF---LLDQMQLPGFRYPPDTYTYTILISSYCRY 250
>gi|89257471|gb|ABD64962.1| PPR repeat containing protein [Brassica oleracea]
Length = 345
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGED--YM 63
C AG A ++A M G + T ++ +L CG E A ME ED ++
Sbjct: 79 CNAGKVDEAWKLAKGMSEHGCVLNTVTYSRILEGVCKCGEMERALELLTEMEKEEDGGFI 138
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
P+ TY VIQA+ + RVQ+ +L M + PN T ++L++
Sbjct: 139 SPNAVTYTLVIQAFVEKK---RVQEALMVLDRM--GDRGCSPNRVTASVLIQ 185
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ CK G + A+ + EME +N L++ G E F E ME G
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEME-GR 366
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
MKP++ TYN +++ + + D V + + P++ TY L+ + +
Sbjct: 367 G-MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKM-----EESGCLPDIVTYNTLI---SWH 417
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
C V + FR + E G K L + L+ LRALCRE ++ E
Sbjct: 418 CKVGKMDEAFRLMD--EMGRKGLKMD---DVTLNTMLRALCRERKLDE 460
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G + F +N ++S G+ + A FE ME KPD TYN +I +
Sbjct: 395 KMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASS--CKPDVVTYNSLINCLGK 452
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
D A +L +++ K P+V TY++L+ECF K V A F
Sbjct: 453 HGDLDE----AHMLFKEMQE-KGYDPDVFTYSILIECFGKSNKVEMACSLF 498
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFAT--FENMEY 58
M+ C A A+++ + M G + +N + S A + +V+F + F+ M+
Sbjct: 341 MLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFS--ALGKLKQVSFISNLFDKMK- 397
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
+ + PD TYN +I +Y R D+ ++ E++ + +P+V TY L+ C
Sbjct: 398 -TNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM-----EASSCKPDVVTYNSLINCLG 451
Query: 119 KYCAVTEAIRHFRALQ 134
K+ + EA F+ +Q
Sbjct: 452 KHGDLDEAHMLFKEMQ 467
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
MI+ + G A E+ MEA+ +N L++C G + A F+ M E G
Sbjct: 411 MISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKG 470
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D PD TY+ +I+ + ++ ++V+ L M+ + PN+ TY +L++C +
Sbjct: 471 YD---PDVFTYSILIECFGKS---NKVEMACSLFDEMISEG--CTPNIVTYNILLDCLER 522
Query: 120 YCAVTEAIRHFRALQ 134
EA + + ++
Sbjct: 523 RGKTEEAHKLYETMK 537
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K GD+ AL I EM G FN L+S E F ME E + D
Sbjct: 202 KGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEME--ERGIARD 259
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN +I Y R ++ A L+ M + ++P+V TY+ +++ + K EA
Sbjct: 260 DVTYNTLIATYCRG---GQMHLGAALMETMAKS-SGIEPSVITYSTMIDGYAKLGLAHEA 315
Query: 127 IRHFRALQN 135
I F+ ++N
Sbjct: 316 IALFQEMRN 324
>gi|334187948|ref|NP_001190400.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332006093|gb|AED93476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 17 IAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQA 76
I E+E +G + FN +++ + G E A M+ E + P T TYN +I+
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK--ELGLNPTTSTYNTLIKG 159
Query: 77 YTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
Y A +R ++ +L M+ E + + PN++T+ +LV+ + K V EA
Sbjct: 160 YGIAGKPERSSELLDL--MLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G + F +N ++S G+ + A FE ME KPD TYN +I +
Sbjct: 395 KMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASS--CKPDVVTYNSLINCLGK 452
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
D A +L +++ K P+V TY++L+ECF K V A F
Sbjct: 453 HGDLDE----AHMLFKEMQE-KGYDPDVFTYSILIECFGKSNKVEMACSLF 498
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFAT--FENMEY 58
M+ C A A+++ + M G + +N + S A + +V+F + F+ M+
Sbjct: 341 MLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFS--ALGKLKQVSFISNLFDKMK- 397
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
+ + PD TYN +I +Y R D+ ++ E++ + +P+V TY L+ C
Sbjct: 398 -TNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM-----EASSCKPDVVTYNSLINCLG 451
Query: 119 KYCAVTEAIRHFRALQ 134
K+ + EA F+ +Q
Sbjct: 452 KHGDLDEAHMLFKEMQ 467
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
MI+ + G A E+ MEA+ +N L++C G + A F+ M E G
Sbjct: 411 MISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKG 470
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D PD TY+ +I+ + ++ ++V+ L M+ + PN+ TY +L++C +
Sbjct: 471 YD---PDVFTYSILIECFGKS---NKVEMACSLFDEMISEG--CTPNIVTYNILLDCLER 522
Query: 120 YCAVTEAIRHFRALQ 134
EA + + ++
Sbjct: 523 RGKTEEAHKLYETMK 537
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K GD+ AL I EM G FN L+S E F ME E + D
Sbjct: 201 KGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEME--ERGIARD 258
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN +I Y R ++ A L+ M + ++P+V TY+ +++ + K EA
Sbjct: 259 DVTYNTLIATYCRG---GQMHLGAALMETMAKS-SGIEPSVITYSTMIDGYAKLGLAHEA 314
Query: 127 IRHFRALQN 135
I F+ ++N
Sbjct: 315 IALFQEMRN 323
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C A D A+E+ EM +G ++ LL G E FE M G ++P
Sbjct: 140 CDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMS-GRG-IEP 197
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D Y +I + R + +V+ A ++ MM E + L+PNV TY +L+ K +V E
Sbjct: 198 DVVMYTALIDSLCR---HGKVKKAARVMDMMTE--RGLEPNVVTYNVLINSMCKEGSVRE 252
Query: 126 AI 127
A+
Sbjct: 253 AL 254
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 42/198 (21%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G AL++ M G +N L++ ++ + A A E M GE
Sbjct: 240 LINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGE 299
Query: 61 DYMKPDTETYNCVIQAYTR--------------AESYDRVQDVA--ELLGMMVEDHK--- 101
++PD T+N VI + AE+ R VA L+G ++ HK
Sbjct: 300 TRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKK 359
Query: 102 -----------RLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFG 150
LQP+ TY++L+ F K R ++ E + ++G
Sbjct: 360 AMELMDEMASSGLQPDSFTYSILINGFCK----------MRQVERAESYLSEMRHQGMEP 409
Query: 151 DPLSL--YLRALCREGRI 166
+P+ L+A+C +G +
Sbjct: 410 EPVHYIPLLKAMCDQGMM 427
>gi|168052832|ref|XP_001778843.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669712|gb|EDQ56293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 953
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ K GD A + EM+ G A T +N L+ A G + A A +M+
Sbjct: 538 LISACVKIGDLERACSLFPEMKELGVEANTHCYNPLIQGFAMQGRFDRALAVMRSMDAAG 597
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KPD TY +I A + ++ D+ +L M E + ++P+ Y +++ ++K
Sbjct: 598 --VKPDVNTYRLLIFACSLSKDQDKAD---QLFAEMQE--REIRPDESIYTVMIIVYSKC 650
Query: 121 CAVTEAIRHFRALQ------NYEGGTKVLHN---EGNFGDPLSLY 156
V I R+L+ E + +LH G + L+LY
Sbjct: 651 GNVDRGIEMIRSLEKSGETAGIEAKSAILHGLAVTGRLEEALALY 695
>gi|26449475|dbj|BAC41864.1| unknown protein [Arabidopsis thaliana]
gi|29028966|gb|AAO64862.1| At5g25630 [Arabidopsis thaliana]
Length = 574
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 17 IAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQA 76
I E+E +G + FN +++ + G E A M+ E + P T TYN +I+
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK--ELGLNPTTSTYNTLIKG 159
Query: 77 YTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
Y A +R ++ +L M+ E + + PN++T+ +LV+ + K V EA
Sbjct: 160 YGIAGKPERSSELLDL--MLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
>gi|242050202|ref|XP_002462845.1| hypothetical protein SORBIDRAFT_02g033010 [Sorghum bicolor]
gi|241926222|gb|EER99366.1| hypothetical protein SORBIDRAFT_02g033010 [Sorghum bicolor]
Length = 798
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG NAL++ +M A G M T+ FN L++ G A F +M +KPD
Sbjct: 197 KAGRLKNALDMFLDMPAHGVMPDTYTFNTLINIFGLSGNSAQAEVLFASMMVRG--VKPD 254
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
T+TYN ++ + +RV +G L P+ +Y +L++
Sbjct: 255 TKTYNVMMTVFASIGDLERVLKYYYQIGKAC-----LHPDAVSYRILLQ 298
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL + EM+ G T F + L+ G + A++ F NM +D KPD N +
Sbjct: 284 ALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNML--KDGCKPDVVLINNL 341
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVEC-FTKYCAVTEAIRHFRA 132
I RA R++D +L G M D + PNV TY +++ F +EA F
Sbjct: 342 INILGRA---GRLEDALKLFGKM--DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEK 396
Query: 133 LQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRA 187
++ + + + ++ + C+ R+ + L LE M + P P A
Sbjct: 397 MK----ANGIAPSSFTY----AILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAA 443
>gi|30689969|ref|NP_197945.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|357528836|sp|Q8GZ63.2|PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630
gi|332006092|gb|AED93475.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 574
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 17 IAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQA 76
I E+E +G + FN +++ + G E A M+ E + P T TYN +I+
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK--ELGLNPTTSTYNTLIKG 159
Query: 77 YTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
Y A +R ++ +L M+ E + + PN++T+ +LV+ + K V EA
Sbjct: 160 YGIAGKPERSSELLDL--MLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
>gi|224068256|ref|XP_002302689.1| predicted protein [Populus trichocarpa]
gi|222844415|gb|EEE81962.1| predicted protein [Populus trichocarpa]
Length = 640
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFAT--FENMEYGEDYM 63
C AG +A+ + E++ +G F + L+ Q C ++ AT F M+Y +
Sbjct: 131 CLAGKVKDAVIVYEELKVSGHEPDAFTYRILI--QGCCKSYQMEDATKIFSEMQY--NGF 186
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
PDT YN ++ +A +V + +L MV+D R + TY +L++ K
Sbjct: 187 LPDTVVYNSLLDGMFKAR---KVMEACQLFEKMVQDGVR--ASCWTYNILIDGLCKNGRA 241
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRIIELLEALEAM 176
F L+ +G F D + S+ + LCR+G + E L +E M
Sbjct: 242 EAGYNLFCGLKK----------KGQFVDAVTYSIVVLLLCRKGHLEEALHLVEEM 286
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 21/183 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFEN-MEYG 59
+I CK G+ +NA+ + M+ G + + L+S + G E A + F ME+G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ P+ TY +I Y +V D L MVE P+ +TY +++ F+K
Sbjct: 513 ---ISPNHVTYTAIIDGYFNLA---KVDDALALFWKMVESGNL--PSSQTYNVMISGFSK 564
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMA 177
+++EA +N+ G + +G + ++ ++ LCR GR + M
Sbjct: 565 TNSISEA-------ENFCGK---MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614
Query: 178 KDN 180
K N
Sbjct: 615 KRN 617
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 33/182 (18%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLS--CQA--TCGIPEVAFATFENMEYGED 61
CKA ALE+ + M + G FN ++ C++ + ++A + M
Sbjct: 304 CKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM----- 358
Query: 62 YMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYC 121
+ PD T+N +I +A ++++ + E MV K +QP+V T+ L++ K
Sbjct: 359 -LVPDKVTFNILIAGACKAGNFEQASALFE---EMVA--KNMQPDVMTFGALIDGLCKAG 412
Query: 122 AVTEAIRHFRALQNYEGGTKVLHNEGNFGDP-----LSLYLRALCREGRIIELLEALEAM 176
V E +L GN G P ++ + LC+ GRI E E LE M
Sbjct: 413 QV-------------EAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEM 459
Query: 177 AK 178
Sbjct: 460 VS 461
>gi|357114648|ref|XP_003559110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Brachypodium distachyon]
Length = 875
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 13 NALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE--DYMKPDTETY 70
+AL++ +M A + N LLS A G+ A FE M+ E D KPD +Y
Sbjct: 367 DALQLWEQMRQKKIPADSILCNTLLSMCADVGLVAEAEQLFEEMKDPELSDVPKPDKWSY 426
Query: 71 NCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
+I Y + DR +Q AE+L +E PN+ +Y ++++C K + +A
Sbjct: 427 TAMINIYGSIKDADRALQLFAEMLAEGIE------PNIMSYTIVIQCLGKTNRIQDA 477
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 19/165 (11%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A E+ EM+ AG + +N L+ + G+P+ A F ME+ +PD +YN +
Sbjct: 324 AEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMG--CEPDRASYNIL 381
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
+ AY RA + + + L + ++P +K++ LL+ K V
Sbjct: 382 VDAYGRAGLHQEAEAAFQEL-----KQQGMRPTMKSHMLLLSAHAKSGNVARC------- 429
Query: 134 QNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAM 176
E LH G D +L L A R GR+ ++ L AM
Sbjct: 430 ---EEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAM 471
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KA ++L++ EM+ G + L++ A G+ E A FE M+
Sbjct: 276 MINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 335
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD YN +++AY+RA Q +E+ +M +H +P+ +Y +LV+ + +
Sbjct: 336 H--EPDVYAYNALMEAYSRA---GLPQGASEIFSLM--EHMGCEPDRASYNILVDAYGRA 388
Query: 121 CAVTEAIRHFRALQ 134
EA F+ L+
Sbjct: 389 GLHQEAEAAFQELK 402
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL + EM+ G T F + L+ G + A++ F NM +D KPD N +
Sbjct: 284 ALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNML--KDGCKPDVVLINNL 341
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVEC-FTKYCAVTEAIRHFRA 132
I RA R++D +L G M D + PNV TY +++ F +EA F
Sbjct: 342 INILGRA---GRLEDALKLFGKM--DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEK 396
Query: 133 LQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRA 187
++ + + + ++ + C+ R+ + L LE M + P P A
Sbjct: 397 MK----ANGIAPSSFTY----AILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAA 443
>gi|356532361|ref|XP_003534742.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 646
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+A + +AL + EM+ G+ +N L A G A FE+M+ +P
Sbjct: 307 CRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCANVGCEGEAVKIFEDMK-SSGTCRP 365
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D+ TY +I Y+ S ++ ++ + M+E +PN+ LV C+ K +
Sbjct: 366 DSFTYASLINMYS---SIGKISEMEAMFNEMMESG--FEPNIIVLTSLVHCYGKAKRTDD 420
Query: 126 AIRHFRALQN 135
++ F L +
Sbjct: 421 VVKIFNQLMD 430
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I + CK + A +I EM G T+ +N + + C EV A
Sbjct: 331 VIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYH--CDHSEVNSALNLVKRMDR 388
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D PD TYN V++ R +DR +V E +G + P+V TYA+++ F K
Sbjct: 389 DKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMG-----KRGFYPSVSTYAVMIHGFCK 442
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
GD +NA ++ EM G + +N LL G + A+ F +E + + PD
Sbjct: 233 VGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMF--LEMDSNGVDPDA 290
Query: 68 ETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
+TY+ I++ + V V E K L PNV TY +++ K V EA
Sbjct: 291 DTYSIFIRSSCQENDLHTVYRVLER-----TKRKNLLPNVFTYNCVIKKLCKDQNVEEA 344
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 13 NALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNC 72
+A++I EM++ G A + L++ A G+ E A FE M+ + +PD YN
Sbjct: 310 SAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQ--QAGHEPDVYAYNA 367
Query: 73 VIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRA 132
+++AY+RA Q +E+ +M H +P+ +Y +LV+ + + EA F +
Sbjct: 368 LMEAYSRA---GFPQGASEIFSLM--QHMGCEPDRASYNILVDAYGRAGLHREAEATFES 422
Query: 133 LQ 134
L+
Sbjct: 423 LK 424
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I KAGD S ALE ++ +G T ++ CG A A FE M +
Sbjct: 276 IIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMR--D 333
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
+ +KP T YN +++ Y +A ++D ++ M + + PN +TY+ L++ +
Sbjct: 334 NGLKPRTRAYNALLRGYVKA---GLLKDAEFVVSEM--ERSGVSPNEQTYSFLIDAY 385
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 33/118 (27%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME--------- 57
K+G ++A+E +M+AAG ++ +N L++ A G+ E A + F M
Sbjct: 562 KSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLL 621
Query: 58 --------YGED-----------YM-----KPDTETYNCVIQAYTRAESYDRVQDVAE 91
+GED YM KPD TY +++A R E +D+V V E
Sbjct: 622 ALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYE 679
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMK 64
CK G S+A I + A G + F FN L+ + A + M +G +
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG---IT 493
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TYN ++ +A D V D + M+E K PN+ TY +L+E F K V+
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFK---AMLE--KGCTPNIITYNILIESFCKDRKVS 548
Query: 125 EAIRHFRALQ 134
EA+ F+ ++
Sbjct: 549 EAMELFKEMK 558
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 25/200 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK S A E+ EM G + F L++ G A FE M + +KP
Sbjct: 579 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI--QRNLKP 636
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I + + ++V EL M+ +R+ PN +Y +L+ + V+E
Sbjct: 637 DVVTYNTLIDGFCKGSEMEKVN---ELWNDMIS--RRIYPNHISYGILINGYCNMGCVSE 691
Query: 126 AIRHFRAL--QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPV 183
A R + + + +E T + N ++ CR G ++ E L M + +
Sbjct: 692 AFRLWDEMVEKGFE-ATIITCNT---------IVKGYCRAGNAVKADEFLSNMLL--KGI 739
Query: 184 PPRAMILSRKYRTLVSSWIE 203
P + Y TL++ +I+
Sbjct: 740 VPDGI----TYNTLINGFIK 755
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I + CK + A +I EM G T+ +N + + C EV A
Sbjct: 331 VIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYH--CDHSEVNSALNLVKRMDR 388
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D PD TYN V++ R +DR +V E +G + P+V TYA+++ F K
Sbjct: 389 DKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMG-----KRGFYPSVSTYAVMIHGFCK 442
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 27/226 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++A AG H++A++ M+ T F +N +L G+ +A A + M
Sbjct: 143 LVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAG 202
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P+ TYN ++ + D ++ M++ + + PNVK Y +L+
Sbjct: 203 --CAPNRATYNVLMDGLCKQ---GMAGDALKMFDEMLD--RGIMPNVKIYTVLLSSLCNA 255
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAK 178
+ EA++ +++ ++G D ++ +L LC+ GR+ E + L M +
Sbjct: 256 GKIDEAVQLLGSMK----------DKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL-VMLQ 304
Query: 179 DNQPVPPRAMILSRK-YRTLVSSWIEPLQEEAELGYEIDYIARYIS 223
D L K Y L+ + + + GY + R IS
Sbjct: 305 DG------GFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNIS 344
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 21/183 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFEN-MEYG 59
+I CK G+ +NA+ + M+ G + + L+S + G E A + F ME+G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ P+ TY +I Y +V D L MVE P+ +TY +++ F+K
Sbjct: 513 ---ISPNHVTYTAIIDGYFNLA---KVDDALALFWKMVESGNL--PSSQTYNVMISGFSK 564
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMA 177
+++EA +N+ G + +G + ++ ++ LCR GR + M
Sbjct: 565 TNSISEA-------ENFCGK---MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614
Query: 178 KDN 180
K N
Sbjct: 615 KRN 617
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAGD + A I M+AAG F +N +++ G+ A + M+ ++ ++PD
Sbjct: 190 KAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMD--KEGIRPD 247
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
T T+N I + RV++ A+L MV + P+ TY L++ + + V EA
Sbjct: 248 TVTWNSSIHGLCKE---GRVKEAAQLFTEMVA--AQATPDNVTYTTLIDGYCRAGNVEEA 302
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
++ L+ +L + + LR LC +G + E+ L M
Sbjct: 303 VK----LRGRMEAAGMLPGVATY----NAILRKLCEDGNMKEVHRLLHEM 344
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK+G+ NAL++ M A + T +N +L G + A + E
Sbjct: 133 LISGYCKSGEIDNALQVLDRMNVAPDVVT---YNTILRTLCDSGKLKQAMEVLDRQLQKE 189
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
Y PD TY +I+A + V +LL M +K +P+V TY +L+ K
Sbjct: 190 CY--PDVITYTILIEATCKESG---VGQAMKLLDEM--RNKGSKPDVVTYNVLINGICKE 242
Query: 121 CAVTEAIRHFRALQNYEGGTKVL-HNEGNFGDPLSLYLRALCREGR 165
+ EAI+ + +Y V+ HN + LR++C GR
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHN---------IILRSMCSTGR 279
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 18/176 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G A + +E +G + +N L+S G + A + M
Sbjct: 98 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN--- 154
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TYN +++ + + +V + + K P+V TY +L+E K
Sbjct: 155 --VAPDVVTYNTILRTLCDSGKLKQAMEVLDR-----QLQKECYPDVITYTILIEATCKE 207
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
V +A++ ++N V+ ++ + +C+EGR+ E ++ L M
Sbjct: 208 SGVGQAMKLLDEMRNKGSKPDVV--------TYNVLINGICKEGRLDEAIKFLNNM 255
>gi|357135887|ref|XP_003569539.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Brachypodium distachyon]
Length = 476
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 21/164 (12%)
Query: 20 EMEAAGRMATTFHFNHLLS--CQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAY 77
+M A G TT +N LL C E A F N+ KPD +YN VI
Sbjct: 151 DMRAGGFAPTTATYNVLLKAHCSDASAPIEDAVRLFRNIP------KPDACSYNTVIDGL 204
Query: 78 TRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYE 137
R R D E+ MV + + P V TY ++ + + +A++ F +
Sbjct: 205 CR---RSRRADAQEIFSEMVANG--VAPTVVTYTTVINWLARDGCLDDALKMFDEM---- 255
Query: 138 GGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQ 181
G + N + S + LC+ GR LE L+ MAK+ +
Sbjct: 256 GRIGIAPNVVTY----SSLIDGLCKGGRAASALELLDRMAKEAK 295
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++ C G AL I EME G + T +N L+ E F E
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFA--EIKA 407
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQ-DVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP TYN ++ AY R R+Q D+ E L +ED L+PNVK++ L+ + +
Sbjct: 408 KGLKPTAATYNILMDAYAR-----RMQPDIVETLLREMEDLG-LEPNVKSFTCLISAYGR 461
>gi|384496023|gb|EIE86514.1| hypothetical protein RO3G_11225 [Rhizopus delemar RA 99-880]
Length = 661
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 8 AGDHSN---ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK 64
+G H AL + EM+ AG + +N LL+C G A A ++ M ++
Sbjct: 107 SGQHEGPERALGVMEEMKRAGVEPNLYTYNLLLNCFKKHGQVAAAEALWKRM----GPIE 162
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TYN ++Q + + DR+ D D ++ +V TY ++++ Y A
Sbjct: 163 PDAVTYNTLLQLWRQTNEGDRLFD-------FFRDQVKV-ADVYTYTIVLDAAMAYGAPE 214
Query: 125 EAIRHFRA------LQNYEGGTKVLHNEGNFGDPLSLYLRALCR 162
E R F A L T + + + L+LY R CR
Sbjct: 215 EGQRAFEALLKQPKLDTAAMNTMLRYKSADVEGCLALYRRLRCR 258
>gi|125575133|gb|EAZ16417.1| hypothetical protein OsJ_31886 [Oryza sativa Japonica Group]
Length = 678
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK ALE+ E+ G +N L+S A+C + A F + ++P
Sbjct: 367 CKNCGPQKALEVLDELSLEGCQPDVVTYNALIS--ASCKAGRLNDAKFILTRLAAEGLEP 424
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY ++ A +D V D+ E + + D P+V TY + + F KY + +
Sbjct: 425 NGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRD-----PDVTTYNIFINYFCKYGHLDQ 479
Query: 126 AI 127
AI
Sbjct: 480 AI 481
>gi|219115087|ref|XP_002178339.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410074|gb|EEC50004.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 576
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 29 TTFHFNHLLSCQATC---GIPEVAFATFENMEY----GEDYMKPDTETYNCVIQAYTRAE 81
F+FN L++ A C G + A E MEY G++ KP T ++N VI AY ++
Sbjct: 265 NAFNFNSLITAWANCCEEGSAQRAEEILERMEYLYKQGDEKCKPTTISFNAVIDAYAKSG 324
Query: 82 SYDRVQDVAELLGMMVEDHKRLQ-----PNVKTYALLVECFTK 119
Q E+L M + + Q PNV+++ ++ + K
Sbjct: 325 DEYAAQKAEEVLRHMEDLYGSGQNLDARPNVRSFNSVINAWAK 367
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G S+AL++ M G F +N +++C + G + A M + P
Sbjct: 311 CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMV--DRGCLP 368
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
DT T+N +I A + D+A L + K L P+V T+ +L+ K
Sbjct: 369 DTTTFNTLIVALCSQNRLEEALDLARELTV-----KGLSPDVYTFNILINALCKVGDPHL 423
Query: 126 AIRHFRALQNYEGG-TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
IR F +++ +V +N + + LC G+++ L+ L+ M +
Sbjct: 424 GIRLFEEMKSSGCAPDEVTYN---------ILIDHLCSMGKLVNALDLLKEMESNG---C 471
Query: 185 PRAMILSRKYRTLVSSWIEPLQ-EEAE 210
PR+ + Y T++ + + ++ EEAE
Sbjct: 472 PRSTV---TYNTIIDALCKQMRIEEAE 495
>gi|242063152|ref|XP_002452865.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
gi|241932696|gb|EES05841.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
Length = 551
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KA E+ +M + G M + L+ G + A+ E M G
Sbjct: 330 MIVALAKADRMEECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLDAAYRVLEEM--GR 387
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
PD TYNC + S + D EL M+E H +P+V TY +L+ F
Sbjct: 388 AGFPPDIVTYNCFLNVLC---SLRKADDALELCERMIEAH--CEPSVHTYNMLMVMF 439
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAG-RMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
++ CK GD +A + EM+ +G + ++ L+ C + A FE+M
Sbjct: 203 LVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDM-IS 261
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ + PD +N +I + R+ +R + + + + PNV Y+ L+ F K
Sbjct: 262 KRGISPDPVIFNVMINGFCRSGEVERAKMILDFM-----KKNGCNPNVYNYSALMNGFCK 316
Query: 120 YCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ EA + F ++ + G K L G + + LCR G I E ++ L M
Sbjct: 317 EGKIQEAKQVFDEVK--KTGLK-LDTVG-----YTTLMNCLCRNGEIDEAMKLLGEM 365
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KA ++L + EM++ G + L++ A G+ E A FE M+ +
Sbjct: 283 MINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ--Q 340
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD YN +++AY+RA Q +E+ +M +H +P+ +Y +LV+ F +
Sbjct: 341 AGHEPDVYAYNALMEAYSRA---GLPQGASEIFSLM--EHMGCEPDRASYNILVDAFGRA 395
Query: 121 CAVTEAIRHFRALQ 134
EA F+ L+
Sbjct: 396 GLHQEAEAAFQELK 409
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 92/230 (40%), Gaps = 30/230 (13%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A E+ EM+ AG + +N L+ + G+P+ A F ME+ +PD +YN +
Sbjct: 331 AEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMG--CEPDRASYNIL 388
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
+ A+ RA + + + L + ++P +K++ LL+ + V
Sbjct: 389 VDAFGRAGLHQEAEAAFQEL-----KQQGMRPTMKSHMLLLSAHARSGNVARC------- 436
Query: 134 QNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDNQPVPPRAMILS 191
E LH G D +L L A R GR+ ++ AM + + + +
Sbjct: 437 ---EEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIA--GAPDT 491
Query: 192 RKYRTLVSSWIEPLQEEAELGY--EIDYIARYISEGGLTGERKRWVPRRG 239
Y +V+++ GY ++ R ++ GL + W R G
Sbjct: 492 STYNVMVNAY-------GRAGYLDRMEAAFRSLAARGLAADVVTWTSRIG 534
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+++ ++G+ + E+ ++ +G TF N +L+ G + F ME G+
Sbjct: 423 LLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGD 482
Query: 61 DYMK--PDTETYNCVIQAYTRAESYDRVQ 87
+ PDT TYN ++ AY RA DR++
Sbjct: 483 GAIAGAPDTSTYNVMVNAYGRAGYLDRME 511
>gi|356557981|ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 706
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+A + +AL + EM+ G+ +N L A G + A FE+M+ P
Sbjct: 367 CRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCANVGCVDEAVKIFEHMK-SSGTCPP 425
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D+ TY +I Y+ S ++ ++ + M+E +PN+ LV C+ K +
Sbjct: 426 DSFTYASLINMYS---SIGKILEMEAMFNEMMESG--FEPNIIVLTSLVHCYGKAKRTDD 480
Query: 126 AIRHFRALQN 135
++ F L +
Sbjct: 481 VVKIFNQLMD 490
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 21/178 (11%)
Query: 16 EIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
+IA +M AG ++ L+SC C + A A F+ M + PD TY+ +I
Sbjct: 64 QIAEDMINAGIRPDNITYSTLISCANRCNYQDAAMAWFDRMHDAQ--CVPDAVTYSTMID 121
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ- 134
Y + YD + E + +P+ TY +V F + ++ A+ F ++
Sbjct: 122 VYGKVGKYDEAVALYESV-----KKSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKG 176
Query: 135 -NYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRAMILS 191
+ G+ V++N + + L R GR+ L+ + M + V P A+ LS
Sbjct: 177 SGIQPGS-VVYN---------IMISCLGRAGRMGHALKVFQEMKQAG--VKPNAVTLS 222
>gi|388500892|gb|AFK38512.1| unknown [Medicago truncatula]
Length = 249
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
+KP+ TYN +IQA+ + + +++ ++ MV + +QP++ TY L F +
Sbjct: 13 VKPNERTYNILIQAWC---TKNELEEAWNVMHKMV--NSGMQPDIVTYNTLARAFAQNGE 67
Query: 123 VTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
A R +Q Y KV NE G + +R C+EG + E L L M
Sbjct: 68 TDNAERLILKMQQYN--NKVKPNERTCG----IIIRGYCKEGNMTEALRFLYKM 115
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 15/118 (12%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHL----LSCQATCGIPEVAFATFENMEYGED 61
CK G+ + AL Y+M+ G FN L L T G+ E A E E+G
Sbjct: 100 CKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEE-ALTLME--EFG-- 154
Query: 62 YMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KPD TY+ ++ A++ + D + E+ MV+ ++P+++ Y++L + + +
Sbjct: 155 -IKPDVVTYSTIMNAWSSSGLMDNCE---EIFDDMVK--AEIEPDIQAYSILAKGYVR 206
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
I CKAGD A + EMEA G + L+ A +PE A FE M+
Sbjct: 734 FINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAG 793
Query: 61 DYMKPDTETYNCVIQAY----TRAESY 83
+KPD Y+C++ + T AE+Y
Sbjct: 794 --LKPDKAVYHCLMTSLLSRATVAEAY 818
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G S ALE++ ME+AG ++ L++ AF FE++ +D +KPD
Sbjct: 460 KMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVI--KDGLKPD 517
Query: 67 TETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
YN +I+A+ + DR + V E+ KR +P +T+ ++ F + +
Sbjct: 518 VVLYNNIIKAFCGMGNMDRAIHMVKEM------QKKRHRPTSRTFMPIIHGFARAGEMRR 571
Query: 126 AIRHF 130
A+ F
Sbjct: 572 ALEIF 576
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM A TF +N L+ A G A + M+ ++ ++P
Sbjct: 669 CKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK--QEGVQP 726
Query: 66 DTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
D TY I A +A R + + E+ + V +PNVKTY L+ +
Sbjct: 727 DIHTYTSFINACCKAGDMLRATKTIQEMEALGV------KPNVKTYTTLIHGWACASLPE 780
Query: 125 EAIRHFRALQ 134
+A+R F ++
Sbjct: 781 KALRCFEEMK 790
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KAGD++ A ++ +M G +T FN L+S + EV+ ++ M+
Sbjct: 256 MIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETD--YKEVS-NIYDQMQ--R 310
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KPD +Y+ +I+AY +A R ++ + M++ R P K+Y +L++ F
Sbjct: 311 TALKPDVVSYSLLIKAYGKAR---REEEALAVFEEMLDAGVR--PTRKSYNILIDAFAIS 365
Query: 121 CAVTEAIRHFRALQNY 136
V EA F+A++ +
Sbjct: 366 GLVEEAHTVFKAMRRH 381
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+++ CK GD S A ++ EME G + + L+ A E A +ME E
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSME--E 436
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ +I + R+ + + L MVE K+ +PN Y +V + K
Sbjct: 437 LGLTPDVHTYSVLIHGFCIK---GRMNEASRLFKSMVE--KKFEPNEVIYNTMVLGYCKE 491
Query: 121 CAVTEAIRHFRALQNYE 137
+ A+R FR ++ E
Sbjct: 492 GSSYRALRLFREMEEKE 508
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G+ A ++ +EM G +A + + L+ GI + F +E M+ E
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ--E 261
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLV 114
+ P+ TYNCV+ + R +D ++ M E + + N+ TY L+
Sbjct: 262 HGVFPNLHTYNCVMNQLCKD---GRTKDAFKVFDEMRE--RGVSCNIVTYNTLI 310
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 27/226 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++A AG H++A++ M+ T F +N +L G+ +A A + M
Sbjct: 143 LVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAG 202
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P+ TYN ++ + D ++ M++ + + PNVK Y +L+
Sbjct: 203 --CAPNRATYNVLMDGLCKQ---GMAGDALKMFDEMLD--RGIMPNVKIYTVLLSSLCNA 255
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAK 178
+ EA++ +++ ++G D ++ +L LC+ GR+ E + L M +
Sbjct: 256 GKIDEAVQLLGSMK----------DKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL-VMLQ 304
Query: 179 DNQPVPPRAMILSRK-YRTLVSSWIEPLQEEAELGYEIDYIARYIS 223
D L K Y L+ + + + GY + R IS
Sbjct: 305 DG------GFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNIS 344
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
KAGD + AL ++A+G T F ++S G E A A FE M+ G +KP
Sbjct: 292 AKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGG--LKP 349
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ +N +++ Y R S + + + + L P+ TY LLV+ + E
Sbjct: 350 RIKAFNALLKGYARKGSLKEAESIISEM-----EKSGLSPDEHTYGLLVDAYAN-VGRWE 403
Query: 126 AIRHF 130
+ RH
Sbjct: 404 SARHL 408
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK+G+ NAL++ M A + T +N +L G + A + E
Sbjct: 190 LISGYCKSGEIDNALQVLDRMNVAPDVVT---YNTILRTLCDSGKLKQAMEVLDRQLQKE 246
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
Y PD TY +I+A + V +LL M +K +P+V TY +L+ K
Sbjct: 247 CY--PDVITYTILIEATCKESG---VGQAMKLLDEM--RNKGSKPDVVTYNVLINGICKE 299
Query: 121 CAVTEAIRHFRALQNYEGGTKVL-HNEGNFGDPLSLYLRALCREGR 165
+ EAI+ + +Y V+ HN + LR++C GR
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHN---------IILRSMCSTGR 336
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G A + +E +G + +N L+S G + A + M
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN--- 211
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TYN +++ + +++ E+L ++ K P+V TY +L+E K
Sbjct: 212 --VAPDVVTYNTILRTLCDS---GKLKQAMEVLDRQLQ--KECYPDVITYTILIEATCKE 264
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
V +A++ ++N V+ ++ + +C+EGR+ E ++ L M
Sbjct: 265 SGVGQAMKLLDEMRNKGSKPDVV--------TYNVLINGICKEGRLDEAIKFLNNM 312
>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
gi|223943161|gb|ACN25664.1| unknown [Zea mays]
gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
Length = 535
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G+ AL++ +M A + FN + G A +E M E KP+
Sbjct: 361 GNLDAALKVLDKMTAKKCVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMR--ELQCKPNVV 418
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
TYNC+++ + + +S D V + + + D + ++PN+ TYA L+E F
Sbjct: 419 TYNCLLRLFNKEKSMDMVLRMKKDM-----DAEGIEPNMHTYAALIEAF 462
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KA ++L + EM++ G + L++ A G+ E A FE M+ +
Sbjct: 283 MINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ--Q 340
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD YN +++AY+RA Q +E+ +M +H +P+ +Y +LV+ F +
Sbjct: 341 AGHEPDVYAYNALMEAYSRA---GLPQGASEIFSLM--EHMGCEPDRASYNILVDAFGRA 395
Query: 121 CAVTEAIRHFRALQ 134
EA F+ L+
Sbjct: 396 GLHQEAEAAFQELK 409
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 19/167 (11%)
Query: 16 EIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
E+ EM+ AG + +N L+ + G+P+ A F ME+ +PD +YN ++
Sbjct: 333 EVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMG--CEPDRASYNILVD 390
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQN 135
A+ RA + + + L + ++P +K++ LL+ + V
Sbjct: 391 AFGRAGLHQEAEAAFQEL-----KQQGMRPTMKSHMLLLSAHARSGNVARC--------- 436
Query: 136 YEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDN 180
E LH G D +L L A R GR+ ++ AM + +
Sbjct: 437 -EEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGD 482
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+++ ++G+ + E+ ++ +G TF N +L+ G + F ME G+
Sbjct: 423 LLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGD 482
Query: 61 DYMK--PDTETYNCVIQAYTRAESYDRVQ 87
PDT TYN ++ AY RA DR++
Sbjct: 483 GASAGAPDTSTYNVLVNAYGRAGYLDRME 511
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 34/246 (13%)
Query: 1 MIAEDCKAGDHSNALEIAYEM---EAAGRMA--TTFHFNHLLSCQATCGIPEVAFATFEN 55
+I CK ALE+ +M E+ G + +N L+ G E E
Sbjct: 346 LINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVER 405
Query: 56 MEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
M M P+T TYNC+I Y +A ++ EL M +D + PNV T LV+
Sbjct: 406 MRSQPRCM-PNTVTYNCLIDGYCKAS---MIEAARELFDQMNKDG--VPPNVVTLNTLVD 459
Query: 116 CFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEA 175
K+ + A+ F +Q G K GN +L +RA C I + +E +
Sbjct: 460 GMCKHGRINGAVEFFNEMQG--KGLK-----GNAVTYTAL-IRAFCNVNNIEKAMELFDE 511
Query: 176 MAKDNQPVPPRAMILSRKYRTLVSSWIEP---------LQEEAELGYEIDYIARYISEGG 226
M + P A++ Y TL+S + L + E G+ D ++ + G
Sbjct: 512 MLEAG--CSPDAIV----YYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLING 565
Query: 227 LTGERK 232
+ K
Sbjct: 566 FCRKNK 571
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 26/245 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ +AG A + +M+ AG FN L++ + A+ + ME
Sbjct: 527 LISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAG 586
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KPD TYN +I +++ + L+ MV++ L P V TY L+ +
Sbjct: 587 --IKPDGVTYNTLISHFSKTGDFSTAH---RLMKKMVKEG--LVPTVVTYGALIHAYCLN 639
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+ EA++ FR + + +KV N + ++ + +LCR+ ++ L ++ M
Sbjct: 640 GNLDEAMKIFRDMSST---SKVPPNTVIY----NILINSLCRKNQVDLALSLMDDMKV-- 690
Query: 181 QPVPPRAMILSRKYRTL-----VSSWIEPLQEEAELGYEIDYI-----ARYISEGGLTGE 230
+ V P + ++ L +S E + E DYI ++S G T +
Sbjct: 691 KGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAK 750
Query: 231 RKRWV 235
K +V
Sbjct: 751 LKSFV 755
>gi|356528278|ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Glycine max]
Length = 1079
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I KAG A ++ +M+ G +N +++ A G+ F M+ +
Sbjct: 863 LIGYYGKAGLMLEASQLFSKMQEGGIKPGKVSYNIMINVYANAGVLHETEKLFHTMQ-RQ 921
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
Y+ PD+ TY ++QAYTR+ +Y + ++ + K + P+ + +L+ F K
Sbjct: 922 GYL-PDSFTYLSLVQAYTRSLNYSKAEETIHAM-----QSKGIPPSCVHFNILLHAFIKA 975
Query: 121 CAVTEAIRHFRALQNY 136
+ EA R + L +
Sbjct: 976 GLIHEAKRVYEDLSTF 991
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C G + AL I EME G + +N L+ + E A F M+
Sbjct: 319 LIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMK--A 376
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQ-DVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ P + TYN ++ AY+R R+Q ++ E L + ++D L+PNVK+Y L+ + +
Sbjct: 377 KGVMPTSATYNILMDAYSR-----RMQPEIIENLLLEMQDMG-LEPNVKSYTCLISAYGR 430
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M+ G T+ + L+ + G E A+ FENM+ + +KP ETY ++ A+ RA
Sbjct: 445 MKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMK--REGIKPSIETYTALLDAFRRA 502
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
Q + ++ +M+ D +++ T+ +L++ F K EA
Sbjct: 503 GD---TQTLMKIWKLMLSD--KIEGTRVTFNILLDGFAKQGHYMEA 543
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ A E+ Y+M + + F+ L++ + G+ AF ++ M+ E +KP
Sbjct: 515 CKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMK--EKGIKP 572
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
T N +I+ Y RA + + D L M+ + + P+ TY L+ F K
Sbjct: 573 TLVTCNTIIKGYLRAGNLSKAND---FLNTMISEG--VPPDCITYNTLINSFVK 621
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+ CK G N EME G A +N L++ G+ AF + M G+
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMA-GK 288
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVA-ELLGMMVEDHKRLQPNVKTYA-LLVE 115
+KP TYN +I + SY+R + V E+LG+ L PN T+ +LVE
Sbjct: 289 G-LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGV------GLCPNAATFNPMLVE 338
>gi|242091740|ref|XP_002436360.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
gi|241914583|gb|EER87727.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
Length = 999
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++A K D+S AL + EME + + + L+ G+ E A TFE +E
Sbjct: 355 LLALYYKNEDYSKALSLLSEMENSKVIPDEVIYGILIRIYGKLGLYEEAEQTFEKIEKAG 414
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ D +TY + Q + A YDR +V E + M + ++P+ +Y+ ++ C+
Sbjct: 415 --LLSDEQTYVAMAQVHLNAGDYDRALEVLESMMM-----RNVKPSHFSYSAILRCYVAK 467
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLR 158
+ A FRAL + L + D L LY+R
Sbjct: 468 EDIVAAEDTFRALSQHG-----LPDVFCCNDLLRLYMR 500
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M++ KAG H A + M+ G FN +++ AT G+ A +TF M+ +
Sbjct: 788 MLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLCSEAKSTFHEMQ--D 845
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD+ +Y +I+AYT A+ Y + E + MM+ P+ ++ L+ F K
Sbjct: 846 CGHAPDSFSYLALIRAYTEAKLY---MEAEEAIRMMLNSST--TPSCPHFSHLIFAFLKE 900
Query: 121 CAVTEAIRHFRALQ 134
+ EA R + ++
Sbjct: 901 GQIGEAQRIYNQMK 914
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM A +F +N L+ A G A + M+ ++ +KP
Sbjct: 702 CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK--KEGVKP 759
Query: 66 DTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D TY I A ++A +R Q + E+ + V +PN+KTY L++ + +
Sbjct: 760 DIHTYTSFISACSKAGDMNRATQTIEEMEALGV------KPNIKTYTTLIKGWAR 808
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 24/201 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C G+ A++ EM+ TT F ++ A G + F+ M
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR--R 617
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P T+N +I + D L G+ +H TY +++ +
Sbjct: 618 CGCVPTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEH--------TYTKIMQGYASV 669
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+A +F LQN + E L+A C+ GR+ L + M+ N
Sbjct: 670 GDTGKAFEYFTRLQNEGLDVDIFTYEA--------LLKACCKSGRMQSALAVTKEMSARN 721
Query: 181 QPVPPRAMILSRKYRTLVSSW 201
+P + + Y L+ W
Sbjct: 722 --IPRNSFV----YNILIDGW 736
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 10/134 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G + AL++ EM G + F N ++ G ++A TF M+
Sbjct: 613 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETF--MDMCR 670
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TYN +I Y +A D+ MM +P++ TY + + Y
Sbjct: 671 MGLSPDIVTYNTLIDGYCKAFDVGGADDL-----MMKMSDSGWEPDLTTYNIRIH---GY 722
Query: 121 CAVTEAIRHFRALQ 134
C V + R L+
Sbjct: 723 CTVRKINRAVMILE 736
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
+I+ K+ + AL+ Y++ ++ T + L+ A G E A FE M +YG
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG 923
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
KP+ +N +I Y + + +L MV + R P++K+Y +LV+C
Sbjct: 924 ---CKPNCAIFNILINGYGKIGD---TETACQLFKRMVNEGIR--PDLKSYTILVDCLCL 975
Query: 120 YCAVTEAIRHFRALQN 135
V EA+ +F L++
Sbjct: 976 AGRVDEALYYFNELKS 991
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
GD E +MEA G M F L+ + AFATF+ M + + P+
Sbjct: 346 GDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMR--KQGILPNLH 403
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
TYN +I RA R++D +LL M + +QP TY ++ F K +A+
Sbjct: 404 TYNTLICGLLRA---GRIEDALKLLDTM--ESVGVQPTAYTYITFIDYFGKSGETGKAVE 458
Query: 129 HFRALQ 134
F ++
Sbjct: 459 TFEKMK 464
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A ++ +M+ G F FN LL+ G F ++ M KPD TYN V
Sbjct: 807 AWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI--SRRCKPDAITYNIV 864
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
I + ++ + D+ D ++ D + P +TY L++ K + EA+R F +
Sbjct: 865 ISSLAKSNNLDKALDF--FYDLVSSDFR---PTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919
Query: 134 QNY 136
+Y
Sbjct: 920 SDY 922
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+G+ A+E +M+A G + N L A G A F + E+ + PD
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR--ENGLAPD 506
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
+ TYN +++ Y++ +V + LL M+ + +P+V L++ K V EA
Sbjct: 507 SVTYNMMMKCYSKV---GQVDEAVNLLSEMIRNG--CEPDVIVVNSLIDSLYKAGRVDEA 561
Query: 127 IRHFRALQNYE-GGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ F +++ + T V +N L L +EGR+ + +E E+M
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNT---------LLSGLGKEGRVQKAIELFESM 603
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL + EM G + + +N L+ G+ E A +E ++ ++PD TYN +
Sbjct: 1017 ALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG--LEPDVFTYNAL 1074
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALL 113
I+ Y+ +E+ + V + MMV+ PN+ TYA L
Sbjct: 1075 IRGYSLSENPEHAYTVYK--NMMVDG---CNPNIGTYAQL 1109
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM TF +N L+ A G A + M+ ED + P
Sbjct: 638 CKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK--EDGVPP 695
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY I A +A R + V E MV+ L+PNVKTY L++ + +
Sbjct: 696 NIHTYTSYINACCKAGDMQRAEKVIE---EMVDVG--LKPNVKTYTTLIKGWARVSLPDR 750
Query: 126 AIRHFRALQ 134
A++ F ++
Sbjct: 751 ALKCFEEMK 759
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM A +F +N L+ A G A + M+ ++ +KP
Sbjct: 706 CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK--KEGVKP 763
Query: 66 DTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D TY I A ++A +R Q + E+ + V +PN+KTY L++ + +
Sbjct: 764 DIHTYTSFISACSKAGDMNRATQTIEEMEALGV------KPNIKTYTTLIKGWAR 812
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 89/258 (34%), Gaps = 77/258 (29%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G S ALE++ M+ G ++ +++ AFA FE+M ++ MKPD
Sbjct: 497 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV--KEGMKPD 554
Query: 67 TETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY----- 120
YN +I A+ + DR +Q V E+ + R +P +T+ ++ F K
Sbjct: 555 VILYNNIIAAFCGMGNMDRAIQTVKEMQKL------RHRPTTRTFMPIINGFAKSGDMRR 608
Query: 121 ----------CAVTEAIRHFRAL--------------------------QNYEGGTKVLH 144
C + F AL N TK++
Sbjct: 609 SLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 668
Query: 145 NEGNFGDPLSLY---------------------LRALCREGRIIELLEALEAMAKDNQPV 183
+ GD + L+A C+ GR+ L + M+ N +
Sbjct: 669 GYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARN--I 726
Query: 184 PPRAMILSRKYRTLVSSW 201
P + + Y L+ W
Sbjct: 727 PRNSFV----YNILIDGW 740
>gi|242059647|ref|XP_002458969.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
gi|241930944|gb|EES04089.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
Length = 530
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA CK G NA E+ +M + +A T N A G P+ A A F ++E
Sbjct: 217 LIAGYCKGGLVQNARELFDKMPSKNLVARTAMIN----GYAQTGQPKAALALFRDLEAAG 272
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++PD T VI A ++ S ++A +G V D K+++ NVK LV+ K
Sbjct: 273 --IEPDGATMVGVISAVSQIGS----TELAGWVGAYV-DRKKIERNVKVLTALVDMHAKC 325
Query: 121 CAVTEAIRHFR 131
+ +A+ FR
Sbjct: 326 GNIEQALSAFR 336
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++ CK G+ +A+++ +ME G T +N L+ G + + + +
Sbjct: 26 LVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKG 85
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ P+ TY+ +++A + V + +LL ++ K QPN+ +Y +L+ K
Sbjct: 86 --LVPNEFTYSFLLEAAYKERG---VNEAMKLLDEIIA--KGWQPNLVSYNVLLTGLCKE 138
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGR 165
EAIR FR L + V+ ++ LR+LC EGR
Sbjct: 139 GRTEEAIRFFRDLPSKGFNPNVV--------SYNIILRSLCHEGR 175
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C+AG A ++ + A G + LL G E AFA F+ M+
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQ--R 335
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KP+ Y +I + + +++D EL ++++ L+PNV TY LV K
Sbjct: 336 STVKPNLVIYTILIDSLCKC---GKIKDGKELFSRLIDE--GLKPNVYTYTALVGALCKE 390
Query: 121 CAVTEAIRHFRALQ 134
+ EA + FR ++
Sbjct: 391 GLIIEAHKLFRKME 404
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A+++ +M A G + FN +L G E A +E M+ E KP+ TYN +
Sbjct: 370 AMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQ--ELQCKPNVVTYNLL 427
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
++ + + +S D V + + + D + ++PNV TY L+E F
Sbjct: 428 MKLFNKEKSMDMVLRIKKDM-----DAQGVEPNVNTYGALIESF 466
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCG-IPEVAFATFENMEYGEDYMK 64
C+AG A ++ EM+ AG M + + ++ G +P + ME G
Sbjct: 255 CRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETG---CP 311
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
P+T T+N +++A+ +A ++V V + + D P++ TY L+E
Sbjct: 312 PNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCD-----PDIITYNFLME 357
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ A ++ +EM G +A + + L+ GI + F +E M+ ED + P
Sbjct: 209 CKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ--EDGVFP 266
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLV 114
+ TYNCV+ + + R +D +L M E + + N+ TY L+
Sbjct: 267 NLYTYNCVMNQHCKD---GRTKDAFKLFDEMRE--RGVSCNIVTYNTLI 310
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 23/142 (16%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG- 59
+++ CK GD S A ++ EME G + + L+ FA +NME
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILID----------TFARMDNMEKAI 428
Query: 60 -------EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYAL 112
E + PD TY+ +I + ++ + + L +MV K+L+PN Y
Sbjct: 429 QLRSPMEELGLTPDVHTYSVLIHGFCIK---GQMNEASRLFKLMVA--KKLEPNKVIYNT 483
Query: 113 LVECFTKYCAVTEAIRHFRALQ 134
+V + K + A+R FR ++
Sbjct: 484 MVLGYCKEGSSYRALRLFREME 505
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 21/168 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK+GD A + EME+ F +N L+S G+ A + + ME
Sbjct: 206 LIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRME--R 263
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ +KPD TYN +I + + R+++ L ++ + PN TY L++ + +
Sbjct: 264 EGIKPDIVTYNSLIHGFCKE---GRMREAMRLF----KEIRDATPNHVTYTTLIDGYCRL 316
Query: 121 CAVTEAIRHFRALQNYEG--GTKVLHNEGNFGDPLSLYLRALCREGRI 166
+ +A+R R +G T V +N LR LC GRI
Sbjct: 317 NDLDQALR-LREEMEAQGLYPTVVTYNS---------ILRKLCEIGRI 354
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 14/169 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G A E+ EM G + L+ G E AF F + + Y KP
Sbjct: 899 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY-KP 957
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY +I Y + + +R AE+L +++ L PNV TY L+ +C
Sbjct: 958 NVHTYTSMIGGYCKEDKLNR----AEMLFSRMKEQG-LFPNVNTYTTLI---NGHCKAGS 1009
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALE 174
R + L N G + N + + +LC++ R E E L
Sbjct: 1010 FGRAYE-LMNLMGDEGFMPNIYTYNAAID----SLCKKSRAPEAYELLN 1053
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG AL++ +EM + + L++ A G+ E A FE M+ E ++PD
Sbjct: 272 KAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQ--EAGLEPD 329
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
YN +++AY+RA AE+ +M H +P+ +Y +LV+ + K
Sbjct: 330 VYAYNALMEAYSRA---GYPYGAAEIFSLM--QHMGCEPDRASYNILVDAYGK 377
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 35/193 (18%)
Query: 1 MIAEDCKA---------------GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGI 45
M++ DCK G A E+ +M+ AG + +N L+ + G
Sbjct: 286 MMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGY 345
Query: 46 PEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--L 103
P A F M++ +PD +YN ++ AY +A QD AE + +D KR +
Sbjct: 346 PYGAAEIFSLMQHMG--CEPDRASYNILVDAYGKAG----FQDDAE---AVFKDMKRVGI 396
Query: 104 QPNVKTYALLVECFTKYCAVT--EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALC 161
P +K++ +L+ ++K +V E I + + T VL++ L+LY R L
Sbjct: 397 TPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSM------LNLYGR-LG 449
Query: 162 REGRIIELLEALE 174
+ G++ E+L +E
Sbjct: 450 QFGKMEEVLRVME 462
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 25 GRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYD 84
G + F +N L A ++A+ F+ M+ PD TY+ V++ +A D
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQ--RRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 85 RVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLH 144
+ + ELLG + E +L NV TY+++++ K V +A+ F+ + + GG
Sbjct: 91 KAK---ELLGQLRESGVKL--NVITYSVVIDGCCKASRVDDALEIFKTMSS--GG----- 138
Query: 145 NEGNFGDPLSL--YLRALCREGRIIELLEALEAMAK 178
G D ++ L+ LC R+ E E MAK
Sbjct: 139 --GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAK 172
>gi|218194139|gb|EEC76566.1| hypothetical protein OsI_14394 [Oryza sativa Indica Group]
Length = 701
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 13 NALEIAYEMEAAGRMATTFHFNHLLSCQATCGI---PEVAFATFENMEYGEDYMKPDTET 69
+AL++ +M A N LLS A G+ E F+ ++ + G D KPD +
Sbjct: 369 DALQLWEQMREKKLPADNILCNTLLSMCADVGLVGEAEQLFSEMKDPDLG-DVPKPDKWS 427
Query: 70 YNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAI 127
Y +I Y + DR +L MVE ++PN+ +Y ++++C K + EA+
Sbjct: 428 YTAMINIYGSSGDADRA---LQLFAEMVESG--IEPNIMSYTIVIQCLGKAGRIQEAV 480
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A E+ +M G +T +N L++ G + A+ F+ M D +PD TYN +
Sbjct: 172 AHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMP--ADGCRPDRFTYNSL 229
Query: 74 IQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+ R D V+ V ++ G + ++PNV TY +LV+ F V EA R
Sbjct: 230 VHGVCRRGIVDEAVRLVRQMEG------EGIRPNVFTYTMLVDGFCNAGRVEEAFR 279
>gi|384253364|gb|EIE26839.1| hypothetical protein COCSUDRAFT_59346 [Coccomyxa subellipsoidea
C-169]
Length = 529
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 318 AASKMVVSELKEELDAQGLPTDGTRNVLYQRVQKAR 353
+ASK+ V +L+ EL A+GL TDG R LY+RVQ AR
Sbjct: 284 SASKLTVGQLRGELAARGLSTDGRRQELYRRVQAAR 319
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM A +F +N L+ A G A + M+ ++ +KP
Sbjct: 705 CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK--KEGVKP 762
Query: 66 DTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D TY I A ++A +R Q + E+ + V +PN+KTY L++ + +
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGV------KPNIKTYTTLIKGWAR 811
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 38/187 (20%)
Query: 33 FNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDR-VQDVAE 91
+N LL+ A G E A FE ++ + PD +Y+C+I + RA ++ ++ VAE
Sbjct: 12 YNSLLNALAKAGQCEEAQLLFEELKAAK--WTPDVVSYSCLINSLGRAGKWEAALEVVAE 69
Query: 92 LLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQN---------YEGGTKV 142
+ K +PN+ TY LV+C K EA+R +++ Y
Sbjct: 70 M------QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIST 123
Query: 143 LHNEGNFGDPLSLY------------------LRALCREGRIIELLEALEAMAKDNQPVP 184
L G + +L+ + L + GR + +E LE M + P
Sbjct: 124 LGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM--ERHGCP 181
Query: 185 PRAMILS 191
P M S
Sbjct: 182 PDVMTYS 188
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G A+E+ EME G ++ L++ G AF F+ M+ KPD
Sbjct: 161 KVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK--RRGRKPD 218
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
+ T+ ++ A +A RV D ELL M E + ++P V TY L+ F K + EA
Sbjct: 219 SITFTALMDALGKA---GRVDDALELLDEMKE--RGVKPGVVTYNALIAGFGKVGDLVEA 273
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
+AG ALE+ EM+A G + +N L+ C G + A M ++ PD
Sbjct: 56 RAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR--DNGCVPD 113
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLV 114
TYNC+I +A R+ + L M E + P+ TY L+
Sbjct: 114 VRTYNCLISTLGKA---GRLSEAFTLFAEMRE--RGCVPDTFTYNSLI 156
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 80/211 (37%), Gaps = 40/211 (18%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG +A + EM G +N L+ G + A FE+M+ E + PD
Sbjct: 406 KAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMK--ESGLLPD 463
Query: 67 TETYNCVIQAYTRAESYD-------------------RVQDVAELL---GMMVEDHKRLQ 104
TY+ ++ ++ + D + + E+L G + E H+ LQ
Sbjct: 464 VATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQ 523
Query: 105 --------PNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLY 156
P +Y L++ K V+EA L+ G ++ S
Sbjct: 524 FANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVS--------YSSL 575
Query: 157 LRALCREGRIIELLEALEAMAKDNQPVPPRA 187
+ AL + G+I E LE M+K + PR+
Sbjct: 576 ISALGQTGQIDTAFELLEEMSKRGLKLSPRS 606
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM A +F +N L+ A G A + M+ ++ +KP
Sbjct: 702 CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK--KEGVKP 759
Query: 66 DTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D TY I A ++A +R Q + E+ + V +PN+KTY L++ + +
Sbjct: 760 DIHTYTSFISACSKAGDMNRATQTIEEMEALGV------KPNIKTYTTLIKGWAR 808
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 24/201 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C G+ A++ EM+ TT F ++ A G + F+ M
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR--R 617
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P T+N +I + D L G+ +H TY +++ +
Sbjct: 618 CGCVPTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEH--------TYTKIMQGYASV 669
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+A +F LQN + E L+A C+ GR+ L + M+ N
Sbjct: 670 GDTGKAFEYFTRLQNEGLDVDIFTYEA--------LLKACCKSGRMQSALAVTKEMSARN 721
Query: 181 QPVPPRAMILSRKYRTLVSSW 201
+P + + Y L+ W
Sbjct: 722 --IPRNSFV----YNILIDGW 736
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A E+ +M G +T +N L++ G + A+ F+ M D +PD TYN +
Sbjct: 172 AHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMP--ADGCRPDHFTYNSL 229
Query: 74 IQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+ R D V+ V ++ G + ++PNV TY +LV+ F V EA R
Sbjct: 230 VHGVCRRGIVDEAVRLVRQMEG------EGIRPNVFTYTMLVDGFCNAGRVEEAFR 279
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 17/192 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI ++G A++I +M+ G TT +N L+ G P + E M E
Sbjct: 98 MINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDE 157
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ +KP+ TYN +IQA+ + ++++ +L MV +QP+V TY + + +
Sbjct: 158 N-VKPNDRTYNILIQAWC---TKKKLEEAWNVLHKMVASG--IQPDVVTYNTMARAYAQN 211
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK-- 178
A R + V NE G +S Y C+EG + E L L M +
Sbjct: 212 GETERAERLILKMPY----NIVKPNERTCGIIISGY----CKEGNMPEALRFLYRMKELG 263
Query: 179 -DNQPVPPRAMI 189
D PV ++I
Sbjct: 264 VDPNPVVFNSLI 275
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 23/142 (16%)
Query: 37 LSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMM 96
C+A G+ E AF + Y KPD +N ++ ++R +DR ++ L+
Sbjct: 606 FKCRALAGM-ERAFQALQKHGY-----KPDLVVFNSMLSMFSRKNMHDRAHEIMHLI--- 656
Query: 97 VEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL- 155
LQP++ TY L++ + + +A R LQ N G+ D +S
Sbjct: 657 --QECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQ----------NSGDKSDLISYN 704
Query: 156 -YLRALCREGRIIELLEALEAM 176
++ CR+G + E L L M
Sbjct: 705 TVIKGFCRQGLMHEALRTLSEM 726
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG +S AL I EME +N L++ G E A + M E+ +KP+
Sbjct: 327 KAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMT--ENGIKPN 384
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
TY +I AY RA D+ + + + PNV TY ++ K
Sbjct: 385 AVTYTTMINAYGRAAQVDKALSLYDQM-----KESGCAPNVCTYNAILGMLGK 432
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFTKYCA 122
PD T+N +I Y + D V+ +VE+ +R + +V TY L+ CF K+
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQ-------LVEEMRRSGCKADVVTYNALINCFCKFGR 273
Query: 123 VTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ A +F A++ EG V+ N F S ++ A C+EG + E ++ M
Sbjct: 274 METAYGYFAAMKR-EG---VMANVVTF----STFVDAFCKEGLVREAMKLFAQM 319
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFTKYCA 122
PD T+N +I Y + D V+ +VE+ +R + +V TY L+ CF K+
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQ-------LVEEMRRSGCKADVVTYNALINCFCKFGR 273
Query: 123 VTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ A +F A++ EG V+ N F S ++ A C+EG + E ++ M
Sbjct: 274 METAYGYFAAMKR-EG---VMANVVTF----STFVDAFCKEGLVREAMKLFAQM 319
>gi|302791145|ref|XP_002977339.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
gi|300154709|gb|EFJ21343.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
Length = 336
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 85/220 (38%), Gaps = 56/220 (25%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCG-IPEVAFATFENMEYGE---D 61
C + L + EM A G + +N L+ G +PE N +GE
Sbjct: 78 CMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEA------NRLFGEMKAK 131
Query: 62 YMKPDTETYNCVIQAYTRAESYDRVQDVAELL------------------------GMMV 97
+ PD TY+C+I + + DR+ L +V
Sbjct: 132 FCNPDVITYSCLIGGFCK---LDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLV 188
Query: 98 EDHKRL---------QPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGN 148
+D +RL P+V TY LV+ F K + EA R + + +GG+ N+
Sbjct: 189 DDAERLLEEMVASDCSPDVYTYTSLVDDFCKVKRMVEAHRVLKRMA--KGGS----NKNC 242
Query: 149 FGDPLS--LYLRALCREGRIIELLEALEAMAKDNQPVPPR 186
D + + + LCR GR+ LE LEA+ + PPR
Sbjct: 243 KADMFAYRMMMDGLCRTGRMSAALELLEAIKQSG--TPPR 280
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL +++ M+++G T +N L++ G A F +E + + + TYN +
Sbjct: 308 ALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFR-VEMPMNGVSHNLATYNTM 366
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
I + Y R D +L M + + +P++++Y L+ F + +RH +
Sbjct: 367 ISIFC---YYGRDDDALNVLKEM--EAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLS- 420
Query: 134 QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRA----MI 189
E +K HN G D +L + LCR G + + + M + + PR+ M+
Sbjct: 421 ---ELTSK--HNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMV--SSEIAPRSKTCVML 473
Query: 190 LSRKYRTLVSSWIE 203
L RT + +++E
Sbjct: 474 LDEAQRTNMETYVE 487
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFTKYCA 122
PD T+N +I Y + D V+ +VE+ +R + +V TY L+ CF K+
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQ-------LVEEMRRSGCKADVVTYNALINCFCKFGR 273
Query: 123 VTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ A +F A++ EG V+ N F S ++ A C+EG + E ++ M
Sbjct: 274 METAYGYFAAMKR-EG---VMANVVTF----STFVDAFCKEGLVREAMKLFAQM 319
>gi|357138018|ref|XP_003570595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Brachypodium distachyon]
Length = 548
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KA + E+ +M G M F L+ + C + ++ A F E G+
Sbjct: 327 MIVALVKADRMDDCFELISDMIKLGCMPDVSTFKDLI--EGMCLVDKIDTAYFVLEEMGK 384
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
PD TYNC ++ + D D +L M+E H +P+V TY +L+ F
Sbjct: 385 AGFPPDIVTYNCFLEVLCNLQKAD---DALKLCERMIEAH--CEPSVHTYNMLMVMF 436
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 17/161 (10%)
Query: 6 CKAGD-HSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK 64
C+ G + A ++ EM+ +G FN LL P+ A + ME+
Sbjct: 298 CRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSG--FS 355
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P TYN +I AY R +++ EL MVE K ++P+V TY L+ F K
Sbjct: 356 PSIVTYNSLISAYARD---GLLREAMELKDQMVE--KGIKPDVFTYTTLLSGFEKAGMDE 410
Query: 125 EAIRHFRALQ---------NYEGGTKVLHNEGNFGDPLSLY 156
A+R F ++ + K+ N G F + + ++
Sbjct: 411 PAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVF 451
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 27/201 (13%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
EM+ AG + FN L+S + CG + A A ++ M E + PD +YN V+ A R
Sbjct: 488 EMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRML--EAGVTPDLSSYNAVLAALAR 545
Query: 80 AESYDRVQDV-AELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEG 138
+++ + V AE+ R +PN TY L+ + + H A + Y G
Sbjct: 546 GGLWEQSEKVFAEM------KDGRCKPNELTYCSLLHAYANSKEIERM--HTLAEEIYSG 597
Query: 139 GTKVLHNEGNFGDPLSLYLRALCREGRIIELL----EALEAMAKDNQP--VPPRAMILSR 192
T +P+ + L+ L +LL A E + K P AMI
Sbjct: 598 LT----------EPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIY 647
Query: 193 KYRTLVSSWIEPLQEEAELGY 213
R +V+ E L E G+
Sbjct: 648 GRRQMVAKANEILNFMNESGF 668
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 22/163 (13%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C A +A E+ M G + FN L+ G+ A F+ M + P
Sbjct: 228 CSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP--DKGCTP 285
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
++ TY+ +I +A D+ ++ +G HK P+ K Y LL EC + E
Sbjct: 286 NSITYSTIISGLAKATKLDQALELFNEMG-----HKGFNPD-KIYQLLAECLNDDDTIEE 339
Query: 126 AIRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGR 165
AI+ R LQ + G VL+N L LCR G+
Sbjct: 340 AIQTVRKLQ--DSGISPHTVLYNA---------ILLGLCRNGK 371
>gi|357144696|ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Brachypodium distachyon]
Length = 606
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI K+GD++ A ++ +M G +T FN L+S + EV+ + ++ M+
Sbjct: 255 MIYMYKKSGDYAQARKLFAQMSERGIPQSTVTFNSLMSFEGD--YKEVS-SIYDQMQRAG 311
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KPD +Y+ +I+AY +A R ++ + + M++ ++P K+Y +L++ F
Sbjct: 312 --LKPDVVSYSLLIKAYGKAR---REEEASAVFEEMLDAG--IRPTRKSYNILLDAFAIS 364
Query: 121 CAVTEAIRHFRALQNY 136
V EA F+ ++ +
Sbjct: 365 GLVEEAQTVFKTMRRH 380
>gi|356536414|ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 553
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+++ KA AL + EM AG T +N LL + G+ E A F++M
Sbjct: 316 LVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQAQTVFKSMR--R 373
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D PD +Y ++ AY A D ++ + +++D +PNV TY L++ + K
Sbjct: 374 DRYFPDLCSYTTMLSAYVNA---DDMEGAEKFFKRLIQDD--FEPNVVTYGTLIKGYAK 427
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G N + M A G +N L+ A+ G+ + A + F ++ ++PD
Sbjct: 326 GQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIK--NSGLRPDVV 383
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+Y ++ +Y R++ + ++V E MM D +L+PN+ +Y +++ + + EA+
Sbjct: 384 SYTSLLNSYGRSQQPKKAREVFE---MMKRD--KLKPNIVSYNAMIDAYGSNGLLAEAVE 438
Query: 129 HFRALQ 134
R ++
Sbjct: 439 VLREME 444
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 11/181 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA C +G +A E+ +M G F F L+ G+ A + M G
Sbjct: 157 LIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGM--GS 214
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++P+ YN +I ++ R R ++ L+ M ED L P+V T+ +
Sbjct: 215 FGVQPNKVIYNTLISSFCRE---GRNEEAERLVERMREDG--LFPDVVTFNSRISALCSA 269
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDN 180
+ EA R FR +Q E N F +L L C+EG + E +E+M ++
Sbjct: 270 GKILEASRIFRDMQIDEELGLPRPNITTF----NLMLEGFCKEGMLEEAKTLVESMKRNG 325
Query: 181 Q 181
Sbjct: 326 N 326
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 19/176 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+AG ALE+ M + G +N L+S G E A E M ED + P
Sbjct: 197 CRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMR--EDGLFP 254
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELL-GMMVEDHKRL-QPNVKTYALLVECFTKYCAV 123
D T+N I A A ++ + + + M +++ L +PN+ T+ L++E F K +
Sbjct: 255 DVVTFNSRISALCSA---GKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGML 311
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFG--DPLSLYLRALCREGRIIELLEALEAMA 177
EA +++ GN + +++L L R G+++E AL+ M
Sbjct: 312 EEAKTLVESMK----------RNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMV 357
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK- 64
C GD A EM G +A+ F +N L+ A + +E ED +K
Sbjct: 333 CNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIH----------ALFLEKRIEEAEDMIKE 382
Query: 65 -------PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
PD TYN I Y R + L MVE K ++P V+TY L++ F
Sbjct: 383 MREKGVEPDVVTYNIQINGYCRC---GNAKKALSLFDEMVE--KNIRPTVETYTSLIDVF 437
Query: 118 TKYCAVTEAIRHFR 131
K ++EA F+
Sbjct: 438 GKRNRMSEAEEKFK 451
>gi|125579703|gb|EAZ20849.1| hypothetical protein OsJ_36487 [Oryza sativa Japonica Group]
Length = 607
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A E+ +M G +T +N L++ G + A+ F+ M D +PD TYN +
Sbjct: 172 AHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMP--ADGCRPDHFTYNSL 229
Query: 74 IQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
+ R D V+ V ++ G + ++PNV TY +LV+ F V EA R
Sbjct: 230 VHGVCRRGIVDEAVRLVRQMEG------EGIRPNVFTYTMLVDGFCNAGRVEEAFR 279
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G + A+E+ +ME ++ ++ G + AF F ME +
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG--ITT 296
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TYN +I + A +D D A+LL M++ +++ PNV T+++L++ F K + E
Sbjct: 297 NIITYNILIGGFCNAGRWD---DGAKLLRDMIK--RKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 126 A 126
A
Sbjct: 352 A 352
>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13800-like [Brachypodium distachyon]
Length = 821
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ A+++ EM G H+ L+ G + A FE M +KP
Sbjct: 411 CKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKAN--VKP 468
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN + ++ V +V +L+G M ED + LQPN TY ++++ F + ++E
Sbjct: 469 DVVTYNILASGLSKR---GLVMEVFDLIGHM-ED-RGLQPNSLTYGVVIDGFCRGDNLSE 523
Query: 126 A 126
A
Sbjct: 524 A 524
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C++GD S A ++ +ME A F ++ ++ G + A + F+ ME +K
Sbjct: 204 CRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME--TKGIKS 261
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
TYN +++ +A ++ D A LL MV + + PNV T+ +L++ F K
Sbjct: 262 SVVTYNSLVRGLCKAGKWN---DGALLLKDMVS--REIVPNVITFNVLLDVFVK 310
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM TF +N L+ A G A + M+ ED + P
Sbjct: 664 CKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK--EDGVPP 721
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY I A +A R + V E MV+ L+PNVKTY L++ + +
Sbjct: 722 NIHTYTSYINACCKAGDMQRAEKVIE---EMVD--VGLKPNVKTYTTLIKGWARVSLPDR 776
Query: 126 AIRHFRALQ 134
A++ F ++
Sbjct: 777 ALKCFEEMK 785
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
+KPD TYN ++ Y + Q V + +M + P+V TY +L+ F K
Sbjct: 548 VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLM-----GVTPDVHTYTILINGFCKSKM 602
Query: 123 VTEAIRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRIIELLEALEAMAKDN 180
V EA+ F+ +H + D + S + LC+ GRI + + ++ M
Sbjct: 603 VDEALNLFKE----------MHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRG 652
Query: 181 QP 182
QP
Sbjct: 653 QP 654
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLS--CQATCGIPEVAFATFENMEY 58
+IA CKAG +A+++ EME G AT +N L+ C+ G+ A F +E
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV-YTAVDLFNKLEG 342
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
+ P TYN +IQ + A + ++E + E + PNV TY++L++
Sbjct: 343 AG--LTPTIVTYNSLIQGFCDA------RRLSEAMQYFDEMEGKCAPNVITYSILIDGLC 394
Query: 119 K 119
K
Sbjct: 395 K 395
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLS--CQATCGIPEVAFATFENMEY 58
+I CK G+ +AL +M+ AG T FN L+ C+A + + E
Sbjct: 424 LINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEG 483
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLV 114
KPD TYNC+I A +RV+D L D PNV T+ L+
Sbjct: 484 ----CKPDVITYNCLISGLCSA---NRVEDAQRLF-----DGMACAPNVTTFNFLI 527
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM TF +N L+ A G A + M+ ED + P
Sbjct: 660 CKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK--EDGVPP 717
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY I A +A R + V E MV+ L+PNVKTY L++ + +
Sbjct: 718 NIHTYTSYINACCKAGDMQRAEKVIE---EMVD--VGLKPNVKTYTTLIKGWARVSLPDR 772
Query: 126 AIRHFRALQ 134
A++ F ++
Sbjct: 773 ALKCFEEMK 781
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 11 HSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETY 70
+ A ++ ME G + F +N L+ A+ +P A F M+ E + D Y
Sbjct: 549 YEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKA--KFYLMKMQETQLVSDCIPY 606
Query: 71 NCVIQAYTRAESYDRVQDV-AELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRH 129
VI ++ + + + + E++G V QP+V Y +L+ F V EA+ +
Sbjct: 607 CAVISSFIKLGQLEMAEGLFKEMIGYNV------QPDVVVYGILINAFADVGNVREAVNY 660
Query: 130 FRALQN 135
AL+N
Sbjct: 661 VNALRN 666
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 15/163 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G+ I EM G + L++ A G E + E M E + P
Sbjct: 427 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR--EQGILP 484
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D YN +I + +A+ R+++ L M+E +RL+PN TY ++ ++K +
Sbjct: 485 DVFCYNSLIIGFCKAK---RMEEARTYLMEMLE--RRLRPNAHTYGAFIDGYSKAGEMEI 539
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
A R+F + + VL N G + + + C+EG + E
Sbjct: 540 ADRYFNEMLS----CGVLPNVGIY----TALIEGHCKEGNVTE 574
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
+ GD A I EM A G A +N LL+ G E A + M E ++PD
Sbjct: 323 RQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM--EKGVEPD 380
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
++TY+ +I+ + R ++ R ELL M ++L P V TY++++
Sbjct: 381 SQTYSLLIEGHCRGQNMAR---AFELLDEM--KKRKLAPTVLTYSVIIN 424
>gi|115441777|ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|20161377|dbj|BAB90301.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534699|dbj|BAF07082.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|125573076|gb|EAZ14591.1| hypothetical protein OsJ_04514 [Oryza sativa Japonica Group]
Length = 533
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G +A E+ M A +A T N A G+P+ + A F ME
Sbjct: 216 LIVGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGY----AQSGVPKESLALFREMEAAG 271
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++PD T VI A ++ S ++A +G V D KR++ N K LV+ K
Sbjct: 272 --IEPDAATMVGVISAASQIGS----TELAGWVGSYV-DKKRIERNDKVLTALVDMHAKC 324
Query: 121 CAVTEAIRHFR 131
V EA+ FR
Sbjct: 325 GNVDEALSAFR 335
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 21/209 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C G NAL++ + G+ +N ++S G E AF ME E + P
Sbjct: 310 CTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEME--EKKLGP 367
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN ++ A AE +V+ + MVE K +P++ T +L+ +
Sbjct: 368 DCYTYNAILCALADAEG--QVEKAFQFRNKMVE--KSFKPDLFTCNILLRGLCTEGMLDN 423
Query: 126 AIRHFRA-LQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
A++ F + + V +N + LC+EGR E + L M + N VP
Sbjct: 424 ALKLFNTWISKGKAIDAVTYNT---------IISGLCKEGRFEEAFDLLAEMEEKNGLVP 474
Query: 185 PRAMILSRKYRTLVSSWIEPLQEEAELGY 213
+ Y T++ + Q E +
Sbjct: 475 DQT-----TYNTIILGYCREGQVEKAFQF 498
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 556 EWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYVFGSPL 615
E +VE A Q K++E P + C +++R + LK+ S G +
Sbjct: 383 EGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVT 442
Query: 616 YDEIISLCLDLGELDAAVAIVADMETTGIAVPDQTLDRVITSRQTGETSVDDA 668
Y+ IIS G + A ++A+ME VPDQT I E V+ A
Sbjct: 443 YNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKA 495
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 16/172 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C G NAL++ + G+ +N ++S G E AF ME ++ + P
Sbjct: 416 CTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEME-EKNGLVP 474
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I Y R +V+ + MVE K +P++ T +L+ + + +
Sbjct: 475 DQTTYNTIILGYCRE---GQVEKAFQFRNKMVE--KSFKPDLFTCNILLRGLCREGMLVK 529
Query: 126 AIRHFRA-LQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
A++ F + + V +N + LC+EGR E + L M
Sbjct: 530 ALKLFNTWISKGKAIDAVTYNT---------IISGLCKEGRFEEAFDLLAEM 572
>gi|226533082|ref|NP_001141414.1| uncharacterized protein LOC100273524 [Zea mays]
gi|194704512|gb|ACF86340.1| unknown [Zea mays]
Length = 637
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A+ ++M+ +G TT FN L+ G PE + F+ M E ++P+ TYN +
Sbjct: 156 AINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGV-EGSVRPNLTTYNIL 214
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
++A+ + +++ ++G M +P++ TY + + A +
Sbjct: 215 VKAWC---DHRNLEEAWGVVGKM--QAGGFEPDIVTYNTIASAYANNDETWRAEELIVEI 269
Query: 134 QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
Q T+V +E +G + + CREGR+ E L ++ M KD VP
Sbjct: 270 Q-----TRVRTSERTWG----IIIGGYCREGRLEEALRCVQQM-KDAGSVP 310
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEA-AGRMATTFHFNHLLSCQ-ATCGIPEVAFATFENMEY 58
+I AG H A++ ME G TTF +N +L A+ G+ +A A + M
Sbjct: 143 LIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVA 202
Query: 59 GEDYMKPDTETYNCVIQAYT-RAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
P+ TYN ++ R + D ++ E+L + + PNVKT+ +L+
Sbjct: 203 AG--CLPNRATYNVLMDGLCKRGTAVDALKLFDEML------QRGITPNVKTHTILLSSM 254
Query: 118 TKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEA 175
+ EA E + ++G D ++ +L LC+ GR+ E +E LEA
Sbjct: 255 CNAGQLKEA----------ENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEA 304
Query: 176 MAKDNQPV 183
+ + V
Sbjct: 305 LRRTGTFV 312
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM A +F +N L+ A G A + M+ ++ +KP
Sbjct: 703 CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK--KEGVKP 760
Query: 66 DTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D TY I A ++A +R Q + E+ + V +PN+KTY L++ + +
Sbjct: 761 DIHTYTSFISACSKAGDMNRATQTIEEMEALGV------KPNIKTYTTLIKGWAR 809
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 29/197 (14%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFAT--FENMEY 58
+I CK ++A++ EM G +N ++ C + ++ AT F+ ME
Sbjct: 239 IIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIV--HGLCCLGQLNEATRLFKRME- 295
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
++ KPD TYN +I + + DR V D A+ L MV+ + + P+V TY ++
Sbjct: 296 -QNGCKPDVVTYNIIIDSLYK----DRLVNDAADFLSEMVD--QGIPPDVVTYTTILHGL 348
Query: 118 TKYCAVTEAIRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALE 174
+ EAIR F+ ++ + G K V +N + +LC++ + + +E L
Sbjct: 349 CYLGQLNEAIRLFKKME--QKGCKPDVVAYNT---------IIDSLCKDRLVNDAMEFLS 397
Query: 175 AMAKDNQPVPPRAMILS 191
M ++ +PP A+ S
Sbjct: 398 EMV--DRGIPPNAVTYS 412
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI C+ G +A + EM AG F +N +++ G E + ME +
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME--D 387
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
M+PD +YN +I Y R S ++ E+ MMV + L TY L++ F
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGS---MRKAFEMCRMMVRNG--LAATTLTYNTLLKGFCSL 442
Query: 121 CAVTEAIR 128
A+ +A+R
Sbjct: 443 HAIDDALR 450
>gi|218191977|gb|EEC74404.1| hypothetical protein OsI_09760 [Oryza sativa Indica Group]
Length = 407
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA CK GD A E+ EM +G + +N+LL C G A E ME E
Sbjct: 198 LIAVKCKTGDFHGAREVFDEMRRSGFGPNSNSWNYLLGCLLKNGRVAEACELVEAMERSE 257
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P++ TY I AY ++ R+ +L M + +L P + + ++ +
Sbjct: 258 HNDIPNSLTYE--ILAYHACKA-GRMDSAMRILDQMFLE--KLTPRITIHTAFIKGYLYA 312
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
+ +A R+ A+ + + SL + LC+ G I++
Sbjct: 313 GRIDDACRYVSAMST--------RDRRSVNRNYSLLAKLLCKAGMIVD 352
>gi|356510096|ref|XP_003523776.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g18475-like [Glycine max]
Length = 640
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 45/205 (21%)
Query: 49 AFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVK 108
AF FE M D++ PD TYN +I + R DR ++V E + R PNV
Sbjct: 382 AFELFEEM-VSRDHIVPDPLTYNVLINEFCRRGKPDRARNVIEFM-----KSNRCYPNVY 435
Query: 109 TYALLVECFTKYCAVTEAIRHFRALQ---------NYEGGTKVLHNEGNFGDPLSLY--- 156
Y+ LV+ K + +A ++ Y L G G+ + L
Sbjct: 436 NYSALVDGLCKVGKLEDAKGVLAEMKGSGLKPDTVTYTSLINFLCRNGQIGEAMGLLKEI 495
Query: 157 ---------------LRALCREGRIIELLEALEAMAKDNQPVPPRAMILSR-KYRTLVSS 200
L LCRE R E L+ LE + P + + L++ YR +++S
Sbjct: 496 KENTCQADTVTFNVILGGLCREDRFEEALDMLEKL-------PQQGVYLNKGSYRIVLNS 548
Query: 201 WIEPLQEEAELGYEIDYIARYISEG 225
L ++ EL + + +S G
Sbjct: 549 ----LTQKCELKKAKELLGLMLSRG 569
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G S A ++ +M +G FN+L+ G PE + M+ + +P
Sbjct: 301 CRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMK--KLGCEP 358
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTY 110
DT TYN +I+ + R E+ +++ ++L M++ K+ + N T+
Sbjct: 359 DTITYNFLIETHCRDEN---LENAVKVLNTMIK--KKCEVNASTF 398
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 11 HSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETY 70
+ A ++ ME G + F +N L+ A+ +P A F M+ E + D Y
Sbjct: 530 YEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKA--KFYLMKMQETQLVSDCIPY 587
Query: 71 NCVIQAYTRAESYDRVQDV-AELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRH 129
VI ++ + + + + E++G V QP+V Y +L+ F V EA+ +
Sbjct: 588 CAVISSFIKLGQLEMAEGLFKEMIGYNV------QPDVVVYGILINAFADVGNVREAVNY 641
Query: 130 FRALQN 135
AL+N
Sbjct: 642 VNALRN 647
>gi|108705884|gb|ABF93679.1| expressed protein [Oryza sativa Japonica Group]
gi|215740500|dbj|BAG97156.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 424
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA CK GD A E+ EM +G + +N+LL C G A E ME E
Sbjct: 215 LIAVKCKTGDFHGAREVFDEMRRSGFGPNSNSWNYLLGCLLKNGRVAEACELVEAMERSE 274
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P++ TY I AY ++ R+ +L M + +L P + + ++ +
Sbjct: 275 HNDIPNSLTYE--ILAYHACKA-GRMDSAMRILDQMFLE--KLTPRITIHTAFIKGYLYA 329
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
+ +A R+ A+ + + SL + LC+ G I++
Sbjct: 330 GRIDDACRYVSAMST--------RDRRSVNRNYSLLAKLLCKAGMIVD 369
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 15/163 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G+ I EM G + L++ A G E + E M E + P
Sbjct: 436 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR--EQGILP 493
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D YN +I + +A+ R+++ L M+E +RL+PN TY ++ ++K +
Sbjct: 494 DVFCYNSLIIGFCKAK---RMEEARTYLMEMLE--RRLRPNAHTYGAFIDGYSKAGEMEI 548
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
A R+F + + VL N G + + + C+EG + E
Sbjct: 549 ADRYFNEMLS----CGVLPNVGIY----TALIEGHCKEGNVTE 583
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
+ GD A I EM A G A +N LL+ G E A + M E ++PD
Sbjct: 332 RQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM--EKGVEPD 389
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
++TY+ +I+ + R ++ R ELL M ++L P V TY++++
Sbjct: 390 SQTYSLLIEGHCRGQNMAR---AFELLDEM--KKRKLAPTVLTYSVIIN 433
>gi|195613918|gb|ACG28789.1| leaf protein [Zea mays]
Length = 637
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A+ ++M+ +G TT FN L+ G PE + F+ M E ++P+ TYN +
Sbjct: 156 AINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGV-EGSVRPNLTTYNIL 214
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
++A+ + +++ ++G M +P++ TY + + A +
Sbjct: 215 VKAWC---DHRNLEEAWGVVGKM--QAGGFEPDIVTYNTIASAYANNDETWRAEELIVEI 269
Query: 134 QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
Q T+V +E +G + Y CREGR+ E L ++ M KD VP
Sbjct: 270 Q-----TRVRTSERTWGIIIGGY----CREGRLEEALRCVQQM-KDAGSVP 310
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM TF +N L+ A G A + M+ ED + P
Sbjct: 659 CKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK--EDGVPP 716
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY I A +A R + V E MV+ L+PNVKTY L++ + +
Sbjct: 717 NIHTYTSYINACCKAGDMQRAEKVIE---EMVD--VGLKPNVKTYTTLIKGWARVSLPDR 771
Query: 126 AIRHFRALQ 134
A++ F ++
Sbjct: 772 ALKCFEEMK 780
>gi|414885834|tpg|DAA61848.1| TPA: leaf protein [Zea mays]
Length = 637
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A+ ++M+ +G TT FN L+ G PE + F+ M E ++P+ TYN +
Sbjct: 156 AINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGV-EGSVRPNLTTYNIL 214
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
++A+ + +++ ++G M +P++ TY + + A +
Sbjct: 215 VKAWC---DHRNLEEAWGVVGKM--QAGGFEPDIVTYNTIASAYANNDETWRAEELIVEI 269
Query: 134 QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
Q T+V +E +G + Y CREGR+ E L ++ M KD VP
Sbjct: 270 Q-----TRVRTSERTWGIIIGGY----CREGRLEEALRCVQQM-KDAGSVP 310
>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 567
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 80/198 (40%), Gaps = 17/198 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD S ALE +M +N +L G+ A F E G ++P
Sbjct: 164 CKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFY--EMGVVNVEP 221
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TYNC+IQ E + V M+ E K + P+V+T+++LV F K +
Sbjct: 222 NVVTYNCLIQGLC-GEVGGWREGVGLFNEMVAE--KGIVPDVQTFSILVNGFCKEGLLLR 278
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
A ++ + V N + +S Y C R+ E + + M ++ + P
Sbjct: 279 A----ESMVGFMIRIGVELNVVTYNSLISGY----CLRNRMEEAVRVFDLMVREGEGCLP 330
Query: 186 RAMILSRKYRTLVSSWIE 203
+ Y +L+ W +
Sbjct: 331 SVV----TYNSLIHGWCK 344
>gi|222624094|gb|EEE58226.1| hypothetical protein OsJ_09197 [Oryza sativa Japonica Group]
Length = 424
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA CK GD A E+ EM +G + +N+LL C G A E ME E
Sbjct: 215 LIAVKCKTGDFHGAREVFDEMRRSGFGPNSNSWNYLLGCLLKNGRVAEACELVEAMERSE 274
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P++ TY I AY ++ R+ +L M + +L P + + ++ +
Sbjct: 275 HNDIPNSLTYE--ILAYHACKA-GRMDSAMRILDQMFLE--KLTPRITIHTAFIKGYLYA 329
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
+ +A R+ A+ + + SL + LC+ G I++
Sbjct: 330 GRIDDACRYVSAMST--------RDRRSVNRNYSLLAKLLCKAGMIVD 369
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G S ALE++ EME AG ++ L++ AFA FE++ +D +KPD
Sbjct: 498 KLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI--KDGIKPD 555
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
YN +I A+ DR V + M + HK P +T+ ++ F + + +A
Sbjct: 556 VVLYNNIITAFCGMGKMDRA--VCTVKEMQKQRHK---PTTRTFMPIIHGFARKGEMKKA 610
Query: 127 IRHF 130
+ F
Sbjct: 611 LDVF 614
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM A TF +N L+ A G A + M+ + ++P
Sbjct: 707 CKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMK--REGVQP 764
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TY I A ++A R E + + ++PNVKTY L+ + + +
Sbjct: 765 DIHTYTSFINACSKAGDMQRATKTIEEMKSV-----GVKPNVKTYTTLINGWARASLPEK 819
Query: 126 AIRHFRALQ 134
A+ F ++
Sbjct: 820 ALSCFEEMK 828
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFAT--FENMEY 58
+I CK G+ + A+E+ +M A G + +N +++ C I E A A + ME
Sbjct: 169 LINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIIN--GLCKIGETAAAAGLLKKME- 225
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
E +P+ TY+ +I + R + D+ + K + P++ TY L++
Sbjct: 226 -EAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM-----KAKGISPDIFTYTSLIQGLC 279
Query: 119 KYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
K+ EA AL N ++ + F ++ + C+EG++ E L L+ M
Sbjct: 280 KFSRWKEA----SALLNEMTSLNIMPDIVTF----NVLVDTFCKEGKVSEALGVLKTM 329
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 32/147 (21%)
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
+ P+ +YN +I + + QD L M + P++ TY++L++ F K
Sbjct: 404 LTPNNVSYNTLIHGFCQLGKLREAQD---LFRNMCTNGNL--PDLFTYSILLDGFCKQGY 458
Query: 123 VTEAIRHFRALQ------NYEGGTKVLH---NEGNFGDPLSLY----------------- 156
+ +A R FRA+Q N T ++H GN D L+
Sbjct: 459 LGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTT 518
Query: 157 -LRALCREGRIIELLEALEAMAKDNQP 182
+ LC+EG + E LEA M D P
Sbjct: 519 IINGLCKEGLLDEALEAFRNMEADGCP 545
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MIA KAG E+ EM G M + L+ + A+ + M +
Sbjct: 334 MIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEM--AK 391
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
PD TYNC ++ + D D EL M+E H +P+V TY +L+ F
Sbjct: 392 AGFPPDIVTYNCFLKVLCGLQKAD---DALELCERMIEAH--CEPSVHTYNMLMVMF 443
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MIA KAG E+ EM G M + L+ + A+ + M +
Sbjct: 334 MIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEM--AK 391
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
PD TYNC ++ + D D EL M+E H +P+V TY +L+ F
Sbjct: 392 AGFPPDIVTYNCFLKVLCGLQKAD---DALELCERMIEAH--CEPSVHTYNMLMVMF 443
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ A E+ +EM G + +N L++ G + A ++ME P
Sbjct: 374 CKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG--FHP 431
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
D TY ++ AY ++ R ELL M++ + LQP V T+ +L+ F
Sbjct: 432 DAVTYTTLMDAYCKSREMVRAH---ELLRQMLD--RELQPTVVTFNVLMNGFC 479
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C G + AL I EME G + +N L+ + E A F M+
Sbjct: 319 LIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMK--A 376
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQ-DVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ P + TYN ++ AY+R R+Q ++ E L + ++D L+PNVK+Y L+ + +
Sbjct: 377 KGVMPTSATYNILMDAYSR-----RMQPEIIENLLLEMQDMG-LEPNVKSYTCLISAYGR 430
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M+ G T+ + L+ + G E A+ FENM+ + +KP ETY ++ A+ RA
Sbjct: 445 MKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMK--REGIKPSIETYTALLDAFRRA 502
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
Q + ++ +M+ D +++ T+ +L++ F K EA
Sbjct: 503 GD---TQTLMKIWKLMLSD--KIEGTRVTFNILLDGFAKQGHYMEA 543
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A+++ +M A G FN +L G + A +E M+ E KP+ TYN +
Sbjct: 365 AMKLLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQ--ELQCKPNVITYNLL 422
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
++ + + +S D V + + + D + ++PNV TY L+E F
Sbjct: 423 MKLFGKDKSMDMVLRIKKDM-----DAQGVEPNVNTYGALIETF 461
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL +++ M+++G T +N L++ G A F +E + + + TYN +
Sbjct: 274 ALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFR-VEMPMNGVSHNLATYNTM 332
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
I + Y R D +L M + + +P++++Y L+ F + +RH +
Sbjct: 333 ISIFC---YYGRDDDALNVLKEM--EAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLS- 386
Query: 134 QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRA----MI 189
E +K HN G D +L + LCR G + + + M + + PR+ M+
Sbjct: 387 ---ELTSK--HNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMV--SSEIAPRSKTCVML 439
Query: 190 LSRKYRTLVSSWIE 203
L RT + +++E
Sbjct: 440 LDEAQRTNMETYVE 453
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 18/156 (11%)
Query: 25 GRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYD 84
G + F +N L A ++A+ F+ M+ PD TY+ V++ +A D
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQ--RRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 85 RVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLH 144
+ + ELLG + E +L NV TY+++++ K V +A+ F+ + GG
Sbjct: 91 KAK---ELLGQLRESGVKL--NVITYSVVIDGCCKASRVDDALEIFKTMS--AGG----- 138
Query: 145 NEGNFGDPLSL--YLRALCREGRIIELLEALEAMAK 178
G D ++ L+ LC R+ E E MAK
Sbjct: 139 --GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAK 172
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM TF +N L+ A G A + M+ ED + P
Sbjct: 649 CKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMK--EDGIPP 706
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ T+ I A +A R ++V + + + L+PNVKT+ L++ + K
Sbjct: 707 NIHTFTSYINACCKAGDMQRAENVIQEMADV-----GLKPNVKTFTTLIKGWAKVSLPDR 761
Query: 126 AIRHFRALQN 135
A++ F +++
Sbjct: 762 ALKCFEEMKS 771
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAGD A + EM G F L+ A +P+ A FE M+ +KP
Sbjct: 719 CKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAG--LKP 776
Query: 66 DTETYNCVIQA 76
D Y+C++ +
Sbjct: 777 DEAAYHCLVTS 787
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G+ ++AL+I M G + +N L+S G E A + M E P
Sbjct: 274 CRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE--CSP 331
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE--CFTKYCAV 123
+T TYN +I A + + D+A +L K L P+V T+ L++ C +K +
Sbjct: 332 NTVTYNTLISALCKENEIEAATDLARIL-----VSKGLLPDVCTFNTLIQGLCLSKNQDI 386
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
A+ F ++N G K +E + S+ + +LC E R+ E L L+ M
Sbjct: 387 --AMEMFEEMKN--KGCK--PDEFTY----SILIDSLCYERRLKEALMLLKEM 429
>gi|242050034|ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
gi|241926138|gb|EER99282.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
Length = 535
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G+ AL++ +M A + FN + G A +E M E KP+
Sbjct: 361 GNLDAALKVLDKMIAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMR--ELQCKPNVV 418
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
TYNC+++ + + +S D V + + M VE ++PN+ TYA L+E F
Sbjct: 419 TYNCLLKLFNKEKSMDMVLRMKK--NMDVEG---IEPNMHTYAALIEAFC 463
>gi|255540497|ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550428|gb|EEF51915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 627
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 17/177 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKA A E+ EMEA G + + L+ Q C EV A + E + P
Sbjct: 416 CKARRLEEACEVLDEMEAHGCLPDIKTWTILI--QGHCVANEVGKALMCLAKMMEKHCDP 473
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D + +I A+ S R+ D A L M + D RL+P TY LL+E + + E
Sbjct: 474 DADLLAVLINAFL---SQKRI-DGAYTLFMDMVDKARLRPWQATYKLLIEKLLEVRKLEE 529
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP 182
A+ R ++ HN F +P Y+ R G + + + L+A++ P
Sbjct: 530 ALNLLRLMKQ--------HNHPPFPEPFVQYIS---RFGTVDDAADFLKALSVKEYP 575
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I + CK G +A ++ +EM G + +N +L+ C EV AT +
Sbjct: 328 IIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYH--CEHSEVNRATKLISIMVK 385
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D PD +YN +++ R +DR ++ E +G + P+V TY++++ K
Sbjct: 386 DNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMG-----ERGFYPSVSTYSVMIHGLCKK 440
Query: 121 CA-VTEAIRHFRAL 133
+ EA R+F +
Sbjct: 441 KGKLEEACRYFETM 454
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 6 CKAGDHSNALEIAYEM--EAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYM 63
C ALE+ + M + G + ++ ++ G P+ A+AT+ M + +
Sbjct: 172 CHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREML--DRRI 229
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
P+ Y+ +I A + ++ D+ +V + MV++ + PN TY LV F +
Sbjct: 230 LPNVVIYSSIIAALCKGQAMDKAMEVHD---RMVKNG--VTPNCFTYTSLVHGFCSSGQL 284
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
TEAI+ + + V+ S ++ LC+ GR E + ++M K
Sbjct: 285 TEAIKFLEKMCSNGVEPNVV--------TYSSFMDYLCKNGRCTEARKIFDSMVK 331
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 19/162 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+G + +A +A M + F FN ++ G ++A+ F+ M + PD
Sbjct: 353 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT--DRGCLPD 410
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN +I RA +R+ D +LL M E P+V TY +V K V EA
Sbjct: 411 IYTYNIMISGACRA---NRIDDARQLLERMTE--AGCPPDVVTYNSIVSGLCKASQVDEA 465
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRI 166
+ +VL N G F D + S + LC+ R+
Sbjct: 466 YEVY----------EVLRNGGYFLDVVTCSTLIDGLCKSRRL 497
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+ S+A I +M AG +N L++ G + A F M E+ P
Sbjct: 247 CKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQML--ENSCSP 304
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D TYN +I Y + E R QD A+LL MV+ +PN TY L++ K
Sbjct: 305 DVFTYNILIDGYCKQE---RPQDGAKLLQEMVK--YGCEPNFITYNTLMDSLVK 353
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 27/180 (15%)
Query: 7 KAGDHSNALEIAYEMEAAG-RMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
K GD +A E+ EM+ + ++ L++ G + A FE M +D + P
Sbjct: 255 KNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEM-VSKDQILP 313
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN +I + DR + E + PNV Y+ L+ F K + E
Sbjct: 314 DALTYNALINGFCHGXKVDRALKIMEFM-----KKNGCNPNVFNYSALMNGFCKEGRLEE 368
Query: 126 AIRHFRALQNYE------GGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKD 179
A F +++ G T ++ NF CR GR+ E +E L+ M ++
Sbjct: 369 AKEVFDEMKSLGLKPDTVGYTTLI----NF----------FCRAGRVDEAMELLKDMXEN 414
>gi|115450361|ref|NP_001048781.1| Os03g0119700 [Oryza sativa Japonica Group]
gi|113547252|dbj|BAF10695.1| Os03g0119700, partial [Oryza sativa Japonica Group]
Length = 436
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA CK GD A E+ EM +G + +N+LL C G A E ME E
Sbjct: 227 LIAVKCKTGDFHGAREVFDEMRRSGFGPNSNSWNYLLGCLLKNGRVAEACELVEAMERSE 286
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P++ TY I AY ++ R+ +L M + +L P + + ++ +
Sbjct: 287 HNDIPNSLTYE--ILAYHACKA-GRMDSAMRILDQMFLE--KLTPRITIHTAFIKGYLYA 341
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
+ +A R+ A+ + + SL + LC+ G I++
Sbjct: 342 GRIDDACRYVSAMST--------RDRRSVNRNYSLLAKLLCKAGMIVD 381
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ + G A E+ EME +N +++C G + A F++M+ E
Sbjct: 466 MISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQ--E 523
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD TY+ +I+ + ++ ++V L MV + PN+ TY +L++C +
Sbjct: 524 KGYDPDVFTYSILIECFGKS---NKVDMACSLFDEMVA--QGCIPNIVTYNILLDCLERR 578
Query: 121 CAVTEAIRHFRALQ 134
TEA + + L+
Sbjct: 579 GKTTEAHKFYETLK 592
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 16/170 (9%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
+G+ A+EI +ME +G TT FN L+ PE + E M + +KP+
Sbjct: 140 SGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTN-LKPNN 198
Query: 68 ETYNCVIQAYTRAESYDRVQDVA-ELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN ++ A + +S +V ++L V QP+V TY L + + +A
Sbjct: 199 RTYNILVGALCKKKSIKEAWNVVHQMLASGV------QPDVVTYNTLARAYAQDGETNKA 252
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ N KV NE G + Y C +G + E L + M
Sbjct: 253 ESIIVDMLN----KKVNPNERTCGIIVGGY----CEQGNLAEALRVVYRM 294
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI K G A+ + ++M+ +G +N L+ A G + A ++ME
Sbjct: 381 MIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDME--R 438
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+K D TYN +I AY + Y +D A L M + L PNV TY+ L++ ++K
Sbjct: 439 VGLKADVVTYNALIDAYGKQGKY---KDAAGLFDKMKAEG--LVPNVLTYSALIDAYSK 492
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG H +A I E + AG ++ L+ CG+ E A + M + ++P+
Sbjct: 492 KAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMT--QAGIQPN 549
Query: 67 TETYNCVIQAYTRAESYDRVQ 87
TYN +I AY R D V+
Sbjct: 550 IVTYNSLIDAYGRNGQVDNVE 570
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ A E+ +EM G + +N L++ G + A ++ME P
Sbjct: 474 CKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG--FHP 531
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
D TY ++ AY ++ R ELL M++ + LQP V T+ +L+ F
Sbjct: 532 DAVTYTTLMDAYCKSREMVRAH---ELLRQMLD--RELQPTVVTFNVLMNGFC 579
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I K+GD S AL++ +A G A T ++S A G A A FE E +
Sbjct: 277 IIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFE--ELRQ 334
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR-LQPNVKTYALLVECFTK 119
+KP T+ YN +++ Y + ++D AEL M+ E KR + P+ TY+LL++ +
Sbjct: 335 SGIKPRTKAYNALLKGYVKTGP---LKD-AEL--MVSEMEKRGVSPDEHTYSLLIDAYVN 388
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 15/176 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKAG+ + ALE+ +M A G + + +++ C + E A A + GE
Sbjct: 167 LINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIIN--GLCKMGETAAAAGLIKKMGE 224
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+PD TY+ +I + + + D+ + K + P V +Y L++ +
Sbjct: 225 VGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYM-----KAKGISPTVVSYTSLIQGLCSF 279
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
EA A+ N ++ + F SL + C+EG ++E L+ M
Sbjct: 280 SRWKEA----SAMLNEMTSLNIMPDIVTF----SLLIDIFCKEGNVLEAQGVLKTM 327
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 23/179 (12%)
Query: 16 EIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
+IA +M A ++ L+SC C + A A F+ M E PD TY+ +I
Sbjct: 64 QIAEDMANADVRPDNITYSTLISCANRCNYQDAAMAWFDRMH--EAGCVPDVVTYSTMID 121
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQN 135
Y + YD + E + +P+ TY +V F + + A+ F ++
Sbjct: 122 VYGKMGKYDEAIALYERV-----KQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKG 176
Query: 136 YEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRAMILS 191
G + +++N + + L R GR+ L+ E M ++ V P A+ LS
Sbjct: 177 --SGVQPDAIVYN---------IMIACLGRAGRMGHALKVFEEMEREG--VKPNAVTLS 222
>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+ + AL+IA M++AG T +N L+ G A FE +E + P+
Sbjct: 292 KSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFE-VEMPSKSVLPN 350
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKT-YALLVECF 117
T TYN +I Y R ++ + E M +H +P+V+T Y LL CF
Sbjct: 351 TSTYNSMIAMYCRRAREEKAMKLLE--EMQKSEH--CKPDVQTYYPLLKSCF 398
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 6 CKAGD-HSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK 64
C+AG + AL++ E++ AG +N LL P+ A + ME + +
Sbjct: 260 CRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQME--SNSFR 317
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
P TYN ++ AY R ++D L MV+ K ++P+V TY L+ F
Sbjct: 318 PSVVTYNSLVSAYVRG---GLLEDALVLKRKMVD--KGIKPDVYTYTTLLSGFVN 367
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
EM A G M +N LLS A+ G+ E+A M++ + PD TYN + +
Sbjct: 309 EMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDH--RCIVPDVFTYNTYLDTLCK 366
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQ 134
A D + V E + KR+ PNV TY+ +++ + K + +A+ + ++
Sbjct: 367 AGQIDLARRVFEEM-----SSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMK 416
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G+ A+E EME +G +N LLS G+ + FE M+ Y P+
Sbjct: 436 KLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIY--PN 493
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
T TY+ +I YT+ E + DV M RL+ +V Y+ +++ K + +
Sbjct: 494 TLTYSTMIDMYTKGEMFQEAMDVYREFKM-----ARLEIDVVFYSAIIDTLCKNGLMESS 548
Query: 127 IRHFRALQNYEGGTK 141
I A+ E G K
Sbjct: 549 IMLLMAMM--EKGIK 561
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 20/185 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ C G +A+++ +M + + + F+ L+ G + A M +
Sbjct: 374 LISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMM--K 431
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KPD TY+ ++ Y ++ + + + H+ + NV++Y +++ F K
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMS-----HRGVTANVQSYNIMINGFCKI 486
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRIIELLEALEAMA- 177
V EA++ F+ +H++ F D + S + LC+ GRI LE ++ M
Sbjct: 487 KMVDEAMKLFKE----------MHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHY 536
Query: 178 KDNQP 182
+ QP
Sbjct: 537 RGQQP 541
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
+KPD TYN +I A +A + D+ + V L M D QP+ TY+ ++ +
Sbjct: 296 VKPDVVTYNLIIDALCKARAMDKAELV---LRQMTTDGA--QPDTVTYSCMIHGYATLGR 350
Query: 123 VTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM-AKDNQ 181
+ EA + FR ++ ++ +L +LC+ GR E E ++M AK ++
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNS--------FLASLCKHGRSKEAAEFFDSMTAKGHK 402
Query: 182 P 182
P
Sbjct: 403 P 403
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G ++ + + M++ G A F L+ A G+ + A F M+ + + PD
Sbjct: 419 GCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQ--QQGVSPDVV 476
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
TY+ VI ++R R+ D E MV + +QPN Y+ +++ F + + +A
Sbjct: 477 TYSTVISTFSR---MGRLTDAMEKFNQMVA--RGIQPNTAVYSSIIQGFCMHGGLVKA-- 529
Query: 129 HFRALQNYEGGTKVLHNEGNFGDP------LSLYLRALCREGRIIE 168
+++ N G P S + +LC++GR+++
Sbjct: 530 -----------KELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMD 564
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDY-MKP 65
K G A+ + Y G FN ++ G ++A ME +KP
Sbjct: 175 KEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKP 234
Query: 66 DTETYNCVIQAYTRAESYDRVQDVA-ELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
D+ TYN + + + + ++ E+LG K ++PNV+TYA LV+ +T+ ++
Sbjct: 235 DSVTYNSFVNGFCKIGNLAVAEEFKKEMLG------KEIEPNVRTYATLVDGYTRVGSLE 288
Query: 125 EAIR 128
A R
Sbjct: 289 NAFR 292
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 33 FNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAEL 92
+N L+ CG + AFA F M + TYN +I + +A V EL
Sbjct: 483 YNTLIHGYCNCGKIDQAFALFSEMR--NSGILASHVTYNTLINSLCKA---GHVLQAKEL 537
Query: 93 LGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAI 127
+ MMV + L P+ TY +L+ F+K C+ E I
Sbjct: 538 MKMMVL--RGLIPDYVTYTILITSFSKKCSPEEVI 570
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 19/178 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKAG+ A+ + +M G F L+ G + A E M +
Sbjct: 157 LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR--K 214
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++P YN +I Y + D + EL+ M + KR++P+V TY+ ++ + Y
Sbjct: 215 CGIQPSVVCYNALINGYCKLGRMDLAR---ELIREM--EAKRVKPDVVTYSTII---SGY 266
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRIIELLEALEAM 176
C V F+ Q + +G D + S +R LC E R+ + E E M
Sbjct: 267 CKVGNLDSAFQLNQK-------MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 317
>gi|125528817|gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indica Group]
Length = 565
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G +A E+ M A +A T N A G+P+ + A F ME
Sbjct: 216 LIVGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGY----AQSGVPKESLALFREMEAAG 271
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++PD T VI A ++ S ++A +G V D KR++ N K LV+ K
Sbjct: 272 --IEPDAATMVGVISAASQIGS----TELAGWVGSYV-DKKRIERNDKVLTALVDMHAKC 324
Query: 121 CAVTEAIRHFR 131
V EA+ FR
Sbjct: 325 GNVDEALSAFR 335
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 17/174 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C G L + +M G + L++ G A +ME G +P
Sbjct: 140 CVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN--CQP 197
Query: 66 DTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
D Y +I + + DR V L M+ H+ + P++ TY L+ C
Sbjct: 198 DVVVYTSIIDSLCK----DRQVTQAFNLFSEMI--HQGISPSIFTYNSLIHALCNLCE-- 249
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
+H AL N +K++ N F S + ALC+EG+++E + ++ M K
Sbjct: 250 --WKHVTALLNEMVNSKIMPNVVIF----STVVDALCKEGKVMEAHDVVDMMIK 297
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G + AL++ +M+AAG A +N L+ G E A A E M+ + ++P
Sbjct: 338 KCGQYKLALDVYRDMQAAGCPANVVTYNTLIDVYGKSGQWEEALAVLEQMK--RERIQPV 395
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
T T+N ++ A + + V E M H PN TY L+ +K
Sbjct: 396 TRTFNTLMIACNTSNQWQEALRVYE--QMAASSHP---PNTTTYNALISAHSK 443
>gi|242034189|ref|XP_002464489.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
gi|241918343|gb|EER91487.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
Length = 585
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
KPD YN I + R D+ DV E+ MV + + P++ TY L+ +K V
Sbjct: 365 KPDVTAYNIFINYFCRYGYLDQAIDVLEV---MVNE--KCFPDIVTYNTLLNAISKRGMV 419
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP- 182
EA+ F +++ E G +V+ N + AL ++G +I + + M D
Sbjct: 420 EEALGIFHSIR--ENGCQVVRITYN------TLIDALAKKGEVINAMTLFDEMTVDGISP 471
Query: 183 --VPPRAMILSRKYRTLVSSWIEPLQEEAELGYEI 215
V ++++ + + +E L + LG+E+
Sbjct: 472 DDVTYGSLVMGFCKKNMAKEALELLNQMLALGFEV 506
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I KA AL + EM AG T +N LL A G+ E A F++M
Sbjct: 321 LINAYGKARREDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQARTVFKSMR--R 378
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D PD +Y ++ AY A ++ L L+PNV TY L++ + K
Sbjct: 379 DRYTPDLCSYTTMLSAYVNASDMAGAENFFNRL-----KQDGLEPNVVTYGALIKGYAKT 433
Query: 121 CAVTEAIRHFRALQ 134
+ + + + +Q
Sbjct: 434 NNLDKMMEKYEEMQ 447
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 17/174 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C G L + +M G + L++ G A +ME G +P
Sbjct: 149 CVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN--CQP 206
Query: 66 DTETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
D Y +I + + DR V L M+ H+ + P++ TY L+ C
Sbjct: 207 DVVVYTSIIDSLCK----DRQVTQAFNLFSEMI--HQGISPSIFTYNSLIHALCNLCE-- 258
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
+H AL N +K++ N F S + ALC+EG+++E + ++ M K
Sbjct: 259 --WKHVTALLNEMVNSKIMPNVVIF----STVVDALCKEGKVMEAHDVVDMMIK 306
>gi|147832566|emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
Length = 457
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 2 IAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGED 61
IA CK G A + + G + +N LLS + + A++ M+ E
Sbjct: 14 IASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMK--EA 71
Query: 62 YMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFTK 119
+ PD TYN +I A T+ R D + E+ R ++P+V +Y L+ CF K
Sbjct: 72 GISPDVITYNSLIAAATKRCLLSRSLD-------LFEEMLRTGIRPDVWSYNSLMHCFFK 124
Query: 120 YCAVTEAIRHFRAL---------QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELL 170
EA R F+ + + L N G G LSLY R L R+G + EL+
Sbjct: 125 LGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLY-RYLQRQGFVPELV 183
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD A + +MEAA A ++ ++ + A F ME ++P
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME--NKGVRP 293
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY+ +I +Y+R D + LL M+E +++ PNV T+ L++ F K + E
Sbjct: 294 NVITYSSLISCLC---NYERWSDASRLLSDMIE--RKINPNVVTFNALIDAFVKEGKLVE 348
Query: 126 A 126
A
Sbjct: 349 A 349
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ CKAG+ +NAL + M + + T +N +L G + A + M +
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVT---YNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR-LQPNVKTYALLVECFTK 119
Y PD TY +I+A R V + + ++ E R P+V TY +LV K
Sbjct: 235 CY--PDVITYTILIEATCRDSG------VGQAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 120 YCAVTEAIRHFRALQNYEGGTKVL-HNEGNFGDPLSLYLRALCREGR 165
+ EAI+ + + V+ HN + LR++C GR
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHN---------IILRSMCSTGR 324
>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+ + AL+IA M++AG T +N L+ G A FE +E + P+
Sbjct: 323 KSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFE-VEMPSKSVLPN 381
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKT-YALLVECF 117
T TYN +I Y R ++ + E + + + +P+V+T Y LL CF
Sbjct: 382 TSTYNSMIAMYCRRAREEKAMKLLEEM----QKSEHCKPDVQTYYPLLKSCF 429
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++A + G S I EM+ AG +A FN L+S + CG + A A +++M E
Sbjct: 445 LLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSML--E 502
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDV-AELLGMMVEDHKRLQPNVKTYALLVECF 117
+ PD TYN V+ A R +++ + V AE+ ED R +PN +Y+ L+ +
Sbjct: 503 AGVVPDLSTYNAVLAALARGGLWEQSEKVLAEM-----ED-GRCKPNELSYSSLLHAY 554
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 17/161 (10%)
Query: 6 CKAGD-HSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMK 64
C+ G + A+ + +M+ G +N LL P+ A + ME +
Sbjct: 274 CRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEME--ANGFS 331
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P + TYN +I AY + +++ +L MV HK ++P+V TY L+ F K
Sbjct: 332 PTSVTYNSLISAYAKG---GLLEEALDLKTQMV--HKGIKPDVFTYTTLLSGFEKAGKDD 386
Query: 125 EAIRHFRALQ---------NYEGGTKVLHNEGNFGDPLSLY 156
AI+ F ++ + K+ N G F + + ++
Sbjct: 387 FAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVF 427
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL +++ M+++G T +N L++ G A F +E + + + TYN +
Sbjct: 262 ALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFR-VEMPMNGVSHNLATYNTM 320
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
I + Y R D +L M + + +P++++Y L+ F + +RH +
Sbjct: 321 ISIFC---YYGRDDDALNVLKEM--EAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLS- 374
Query: 134 QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPRA----MI 189
E +K HN G D +L + LCR G + + + M + + PR+ M+
Sbjct: 375 ---ELTSK--HNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMV--SSEIAPRSKTCVML 427
Query: 190 LSRKYRTLVSSWIE 203
L RT + +++E
Sbjct: 428 LDEAQRTNMETYVE 441
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G + A+EI EME G +F +N L++ E+ + + M+ P
Sbjct: 102 CKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQ--ARGFSP 159
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
TY +I + A D D+ + + +H+ + PN TY L++
Sbjct: 160 TVVTYTTLIHGFCTAGRVDAAMDILDEM-----EHRGITPNTVTYTALIQ 204
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 50/120 (41%), Gaps = 9/120 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G A + EM A G +N L+ C + E+ FA + E
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLI--DGLCKMGELDFAREMQILMVE 331
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDH-KRLQPNVKTYALLVECFTK 119
+ PD TY +IQ A D E LG+M E K + PN TY L+ FT+
Sbjct: 332 KGVAPDVFTYTSLIQGLCDAGLLD------EALGLMQEMRAKGIVPNSVTYTTLINGFTQ 385
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI K G A+ + ++M+ +G +N L+ A G + A ++ME
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDME--R 439
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+K D TYN +I AY + Y +D A L M + L PNV TY+ L++ ++K
Sbjct: 440 VGLKADVVTYNALIDAYGKQGKY---KDAACLFDKM--KGEGLVPNVLTYSALIDSYSK 493
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G F +N L+S G + A FE +E + KPD +YN +I +
Sbjct: 501 KMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSD--CKPDIISYNSLINCLGK 558
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D A + + ++D K L P+V TY+ L+ECF K
Sbjct: 559 NGDVDE----AHMRFLEMQD-KGLNPDVVTYSTLIECFGK 593
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ + G A+E+ E+E++ +N L++C G + A F M+ +
Sbjct: 517 LISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQ--D 574
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ +I+ + + D+V+ L M+ + PN+ TY +L++C +
Sbjct: 575 KGLNPDVVTYSTLIECFGKT---DKVEMARSLFDRMIT--QGCCPNIVTYNILLDCLERA 629
Query: 121 CAVTEAIRHFRALQ 134
E + + L+
Sbjct: 630 GRTAETVDLYAKLR 643
>gi|219129522|ref|XP_002184936.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403721|gb|EEC43672.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 886
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-----EYGED 61
+A D N + Y A T +N +++ A PE A A + M + G
Sbjct: 669 RAEDLLNEMNHRYGQGQASVRPNTISYNAVMNGWARAKNPEKAAAVLQKMYADVKKEGNI 728
Query: 62 YMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHK----RLQPNVKTYALLVECF 117
PD +T+N +I+A+ ++ + E+L MVE ++ +++P V TY ++ C+
Sbjct: 729 NALPDDKTFNTLIKAFALSQDPGAPEKAEEILRHMVEQYELGASKVKPTVVTYTTVILCY 788
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G A + EM G ++ ++SC + G F+ M+ ++ ++PD +
Sbjct: 230 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMK--KESIEPDRK 287
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
YN VI A +A V + L+ M E+ K ++PNV TY L++ K EA +
Sbjct: 288 VYNAVIHALAKASF---VSEARNLMKTM-EEEKGMEPNVVTYNSLIKPLCKARKTEEAKQ 343
Query: 129 HF 130
F
Sbjct: 344 VF 345
>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
Length = 594
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
ALE+ EM G +N L++ G E A +N+ + M PD TYN +
Sbjct: 296 ALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHG--MVPDAVTYNTL 353
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
+ + +R +D V ++ +++ + ++ P V T +L+ K + AI +
Sbjct: 354 LHSLSRRGHWDEVDEILKIMSISLQ-----PPTVVTCNVLINGLCKNGLLDSAINFLNQM 408
Query: 134 QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+Y ++ + L ALC+EG + E + L +
Sbjct: 409 FSYNCLPDII--------TYNTLLGALCKEGMVDEAFQLLHLLT 444
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M+ G F +N L+S G + A FE +E + KPD +YN +I +
Sbjct: 506 KMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSD--CKPDIISYNSLINCLGK 563
Query: 80 AESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D A + + ++D K L P+V TY+ L+ECF K
Sbjct: 564 NGDVDE----AHMRFLEMQD-KGLNPDVVTYSTLIECFGK 598
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ + G A+E+ E+E++ +N L++C G + A F M+ +
Sbjct: 522 LISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQ--D 579
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY+ +I+ + + D+V+ L M+ + PN+ TY +L++C +
Sbjct: 580 KGLNPDVVTYSTLIECFGKT---DKVEMARSLFDRMIT--QGCCPNIVTYNILLDCLERA 634
Query: 121 CAVTEAIRHFRALQ 134
E + + L+
Sbjct: 635 GRTAETVDLYAKLR 648
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK+G A+++ YEMEA+G M + + L++ + + A FE +Y +
Sbjct: 311 LISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFE--QYKK 368
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHK--RLQPNVKTYALLVECFT 118
+ T N V+ AY RA ++ MV++ + ++ PN +TY +++
Sbjct: 369 SGFPMEVPTCNAVVGAYCRASKFEHAFK-------MVDEMRECKIGPNSRTYDVILHYLI 421
Query: 119 KYCAVTEAIRHFRAL 133
K EA F+ +
Sbjct: 422 KSQKFEEAYNVFQRM 436
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 28/186 (15%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
++ C+ G A + M+ G + T +N L+S A G + A E M +G
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309
Query: 60 EDYMKPDTETYNCVIQAYTRAESYD---RVQDVAELLGMMVEDHKRLQPNVKTYALLVEC 116
+PD TYN + +A D +++D E LG+ + P+V TY LV+
Sbjct: 310 ---FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGI-------VSPDVVTYNTLVDA 359
Query: 117 FTKYCAVTEAIRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEAL 173
K ++A+ ++ E G K V HN + ++ LCREG++ E L L
Sbjct: 360 CFKCQRSSDALNLLEEMR--EKGVKSSLVTHN---------IIVKGLCREGQLEEALGRL 408
Query: 174 EAMAKD 179
E M ++
Sbjct: 409 EMMTEE 414
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A+++ M A G + FN +L G A +E M+ E KP+ TYN +
Sbjct: 375 AMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQ--ELQCKPNVVTYNLL 432
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
++ + +S D V + + + D + ++PNV TYA L+E F
Sbjct: 433 MRLFNLEKSMDMVLRIKKDM-----DAQGVEPNVNTYAALIEAF 471
>gi|145356823|ref|XP_001422624.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582867|gb|ABP00941.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 744
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 18 AYEM--EAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
AYEM + G T F+ L++ + AF F+ M + ++P+ TY+ ++
Sbjct: 100 AYEMMTKLHGAKPNTITFSALINALGKAKQCDRAFQIFDEMN--DRGIEPNIFTYSALLG 157
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF-RALQ 134
A RA+ Y R D+ + L +E+H+ ++ + TY ++C + +AI F R L
Sbjct: 158 ACARAKQYQRAMDIFQDL---IENHRDVEVDRITYGAAIQCCVQGRRADKAIEIFERMLA 214
Query: 135 NYEGGTKVLHN 145
+ G + +N
Sbjct: 215 SGIKGNIITYN 225
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK A ++ EM G + + +N L+ G+ + AF + ME + P
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME--SNSCGP 402
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+T TYN +I + +V LL M+E ++L P++ TY L+ C V +
Sbjct: 403 NTRTYNELICGLCKKR---KVHKAMALLNKMLE--RKLSPSLITYNSLIH---GQCKVND 454
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGD--PLSLYLRALCREGRI 166
+R L +++ G D S+++ LC+EGR+
Sbjct: 455 LESAYRLLS-------LMNENGLVPDQWTYSVFIDTLCKEGRV 490
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 17/175 (9%)
Query: 6 CKAGDHSNALEIAYEM--EAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYM 63
C ALE+ + M + G + ++ + G P+ A+AT+ M + +
Sbjct: 172 CHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREML--DRRI 229
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
P+ TY+ +I A + ++ D+ +V + MV++ + PN TY LV F +
Sbjct: 230 LPNVVTYSSIIAALCKGQAMDKAMEVHD---RMVKNG--VTPNCFTYTSLVHGFCSSGQL 284
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
TEAI+ + + V+ S ++ LC+ GR E + +M K
Sbjct: 285 TEAIKFLEKMCSNGVEPNVV--------TYSSFMDYLCKNGRCTEARKIFYSMVK 331
>gi|242054089|ref|XP_002456190.1| hypothetical protein SORBIDRAFT_03g031900 [Sorghum bicolor]
gi|241928165|gb|EES01310.1| hypothetical protein SORBIDRAFT_03g031900 [Sorghum bicolor]
Length = 731
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 10 DHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTET 69
D + AL EM + G +T + L+ A G P+VA FE ME + + D
Sbjct: 504 DSAGALAFFNEMRSRGIAPSTVSYTTLMKAFAVSGQPKVAHKVFEEMER-DPRVTVDRAA 562
Query: 70 YNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
+N +++ Y R + + V E + + +QP+V TY L +
Sbjct: 563 WNMLVEGYCRLGQVETAKQVVERM-----KERGVQPDVATYGSLAK 603
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK G A ++ +EM G T F L+ C I ++A A+ E E
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALIC--GLCQINKMAEASKLFDEMVE 533
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ P+ TYN +I+ + R + R ELL M++ K L P+ TY L+
Sbjct: 534 LKILPNEVTYNVLIEGHCREGNTTRA---FELLDEMIK--KGLSPDTYTYRPLIAGLCST 588
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRIIELLEALEAMA 177
V+EA + F LH++ D L + L+ C+EGRI E L A + M
Sbjct: 589 GRVSEA-KEF---------INDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMV 637
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ + A+++ EM+ G H+ L++ G + A FE M ++P
Sbjct: 116 CKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKAN--IEP 173
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN + + ++ V +V +LL M + + L+PN TY + + F + ++E
Sbjct: 174 DIVTYNILASGFCKS---GLVMEVFDLLDRMAD--QGLEPNSLTYGIAIVGFCRGGNLSE 228
Query: 126 A 126
A
Sbjct: 229 A 229
>gi|225454807|ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Vitis vinifera]
Length = 457
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 2 IAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGED 61
IA CK G A + + G + +N LLS + + A++ M+ E
Sbjct: 14 IASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMK--EA 71
Query: 62 YMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLVECFTK 119
+ PD TYN +I A T+ R D + E+ R ++P+V +Y L+ CF K
Sbjct: 72 GISPDVITYNSLIAAATKRCLLSRSLD-------LFEEMLRTGIRPDVWSYNSLMHCFFK 124
Query: 120 YCAVTEAIRHFRAL---------QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELL 170
EA R F+ + + L N G G LSLY R L R+G + EL+
Sbjct: 125 LGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLY-RYLQRQGFVPELV 183
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFA--TFENMEY 58
+I CKA A E+ EM G + T +N L+ C ++ A F+ M
Sbjct: 85 LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID--GFCKKKDLVAAKDVFDKMVR 142
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
P+ TY +I +++ +VQ AE+L MV+ K + PNV TY+ L++ F
Sbjct: 143 SN--CVPNVVTYTTLIDGLSKS---GKVQAAAEVLDGMVK--KGVTPNVATYSCLIDGFC 195
Query: 119 KYCAVTEAIRHFRALQNYE-GGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
K V EA + + T V +N + L +LCR ++ + + MA
Sbjct: 196 KVRRVDEAHKLLEQMVTQGIAPTVVTYN---------ILLNSLCRADKLEDAFKLFRGMA 246
Query: 178 K 178
+
Sbjct: 247 Q 247
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P+T TYN +I+ Y S ++++ LL M LQP+V TY LL++ + K
Sbjct: 271 PNTRTYNIMIRGYC---SLGQLEEAVRLLKKM--SGSGLQPDVVTYILLIQYYCKIGRCA 325
Query: 125 EAIRHFRAL--QNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP 182
EA F ++ + + + + H + L +G +I++ + L+ M +D P
Sbjct: 326 EARSVFDSMVRKGQKPNSTIYH----------ILLHGYATKGALIDVRDLLDLMIRDGIP 375
Query: 183 VPPRAM 188
RA
Sbjct: 376 FEHRAF 381
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G S AL + EM G F F ++ G + A++ ++ M+ + + P+
Sbjct: 553 KRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMK--RNNVTPN 610
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR--LQPNVKTYALLV 114
+TY C++ + + + D + M+++D KR + P+VKTY L+
Sbjct: 611 VKTYTCLVDGFCKLKRLD-------MATMLIDDMKRNSVTPDVKTYTALI 653
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 49 AFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVK 108
A FE M P TYN +I Y RA D + LLG MV+D+ P+V
Sbjct: 274 AVDIFEEMS-----CAPTAITYNSLIGGYCRAGDMD---EAIRLLGKMVDDN--CAPDVI 323
Query: 109 TYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
TY L+ F K + +A F+ + + V+ + + LC EGR+ +
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV--------TFTSLVDGLCGEGRMED 375
Query: 169 LLEALEAMAKDNQP 182
LE LE + + P
Sbjct: 376 ALELLEEITRRGCP 389
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 35/199 (17%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL++ M+A G + + L+ G ++A FE M+ E +PD TY C+
Sbjct: 387 ALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQ--EARCQPDVATYTCL 444
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
+ Y A+ DRV V E + K P+ +TY L++ T +A R ++ +
Sbjct: 445 LVGYGNAKRMDRVTAVLEEM-----TQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKM 499
Query: 134 -----------------------QNYEGGTKV---LHNEGNFGD--PLSLYLRALCREGR 165
+NY G V +H G D ++++ R GR
Sbjct: 500 IKKGLEPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFINGHIRHGR 559
Query: 166 IIELLEALEAMAKDNQPVP 184
E + +E M P
Sbjct: 560 PEEAYKYIEEMINKGMTAP 578
>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK+GD A ++ EME + +N L+S + + A + ME
Sbjct: 196 LIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAG 255
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TYN +I + + ++++ +L + K + PN TY L++ + +
Sbjct: 256 --VSPDIVTYNSLIYGFCKE---GKMREAVKLF----REIKDVSPNHVTYTTLIDGYCRV 306
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
EA+R + ++ K LH + + LR LC EGRI
Sbjct: 307 NDFEEALRLCKVME-----AKGLHLGVATYNSV---LRKLCEEGRI 344
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 23/205 (11%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G +A + +M G +N L+ A G+ AF+TFE M G+ + KP
Sbjct: 468 CEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVM-VGKGW-KP 525
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAEL-----LGMMVED--HKRLQPNVKTYALLVECFT 118
+ ++Y +++ + S D D+ ++ L +++ED ++L Y+ + C
Sbjct: 526 NEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLC 585
Query: 119 KYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
+ + EA F +QN N D + + CR + + L L++M K
Sbjct: 586 RVDRLEEAKHFFMGMQN--------ANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTK 637
Query: 179 DNQPVPPRAMILSRKYRTLVSSWIE 203
+P YR ++SS E
Sbjct: 638 SGY-LPHL-----ESYRIIISSLCE 656
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Query: 16 EIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
EI +++ AG + +N L+ + G P A F M++ +PD +YN ++
Sbjct: 367 EIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMG--CEPDRASYNIMVD 424
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRL--QPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
AY RA ++ Q V E++ KRL P +K++ LL+ +++ V +
Sbjct: 425 AYGRAGLHEDAQAVFEVM-------KRLGITPTMKSHMLLLSAYSRAGKVAKC------- 470
Query: 134 QNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDNQP 182
E +H G D L L R G+ ++ E L AM K P
Sbjct: 471 ---EEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYP 518
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KA AL++ +EM + F L++ A G+ E A FE ++ E ++PD
Sbjct: 323 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ--EAGLEPD 380
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
YN +++AY+RA AE+ +M H +P+ +Y ++V+ + + +A
Sbjct: 381 VYAYNALMEAYSRA---GFPYGAAEIFSLM--QHMGCEPDRASYNIMVDAYGRAGLHEDA 435
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPR 186
F ++ G T + + L L A R G++ + E + M K + P
Sbjct: 436 QAVFEVMKRL-GITPTMKSH-------MLLLSAYSRAGKVAKCEEIVNQMHKSG--IKPD 485
Query: 187 AMILS 191
+L+
Sbjct: 486 TFVLN 490
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
+KP TY +I Y A Y + L G MV + + QPNVKT+ L+ K
Sbjct: 148 IKPTVVTYTSLITVYANAGIYSSPNQLCPLFGEMVAE--KCQPNVKTFTSLINSCRKGGH 205
Query: 123 VTEAIRHFRALQNY 136
V EA F A++ Y
Sbjct: 206 VEEAQTIFEAMKEY 219
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 16 EIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
E+ EM+ AG + +N L+ + G+P+ A F M++ +PD +YN ++
Sbjct: 138 EVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG--CEPDRASYNILVD 195
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQN 135
AY RA ++ + V E L + + P +K++ LL+ + T
Sbjct: 196 AYGRAGLHEDAEAVFEEL-----KQRGMSPTMKSHMLLLAAHARSGNATRC--------- 241
Query: 136 YEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAM 176
E LH G D +L L A R GR+ ++ AM
Sbjct: 242 -EEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAM 283
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAG+ S AL + E+E + F ++ L+ + CG+ + A E + P
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILI--KGLCGVDRMEEADGLLQEMKKKGFLP 401
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ TYN +I Y + + ++ +V M E K ++PN+ T++ L++ + K
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCS---QMTE--KGIEPNIITFSTLIDGYCK 450
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK ALE+ EM G + F L+ C E+ A ++ + P
Sbjct: 274 CKIAHVKKALELYXEMLGDGLLPNVVTFGILI--DGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMM--VEDHKRLQPNVKTYALLVECFTKYCAV 123
+ YNC+I Y +A +++E L + +E H+ L P+V TY++L++ C V
Sbjct: 332 NIFVYNCLIDGYCKA------GNLSEALSLHSEIEKHEIL-PDVFTYSILIK---GLCGV 381
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDNQ 181
++ +G + + +G + ++ + C+EG + + +E M + +
Sbjct: 382 DR-------MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE--K 432
Query: 182 PVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIAR 220
+ P + S TL+ + + + EA +G + + +
Sbjct: 433 GIEPNIITFS----TLIDGYCKAGKMEAAMGLYTEMVIK 467
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M+A + G H+ ++ EM+ G FN L+S A CG EV A YGE
Sbjct: 467 MLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCG-SEVDSAKM----YGE 521
Query: 61 ---DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
P TYN ++ A R + + V + + K +PN +Y+LL+ C+
Sbjct: 522 MVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDM-----RTKGFKPNENSYSLLLHCY 576
Query: 118 TK 119
+K
Sbjct: 577 SK 578
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
E++ G T +N +L GI A + + ME ++ PD+ TYN + Y R
Sbjct: 311 ELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEME--DNNCPPDSVTYNELAATYVR 368
Query: 80 AESYDRVQDVAELLGMMVED---HKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQN 135
A D GM V D K + PN TY +++ + K +A+R F +++
Sbjct: 369 AGFLDE--------GMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKD 419
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 71/192 (36%), Gaps = 35/192 (18%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M+A G + + L+ G ++A FE M+ E +PD TY C++ Y A
Sbjct: 392 MKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQ--EAKCQPDVATYTCLLVGYGNA 449
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL------- 133
+ DRV V E + K P+ +TY L++ T +A R ++ +
Sbjct: 450 KQMDRVTAVLEEM-----TQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEP 504
Query: 134 ----------------QNYEGGTKV---LHNEGNFGD--PLSLYLRALCREGRIIELLEA 172
NY G V +H G D ++++ R GR E +
Sbjct: 505 TIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKY 564
Query: 173 LEAMAKDNQPVP 184
+E M P
Sbjct: 565 IEEMINKGMKAP 576
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ CKAG+ +NAL + M + + T +N +L G + A + M +
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVT---YNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
Y PD TY +I+A R V +LL M + + P+V TY +LV K
Sbjct: 235 CY--PDVITYTILIEATCRDSG---VGHAMKLLDEMRD--RGCTPDVVTYNVLVNGICKE 287
Query: 121 CAVTEAIRHFRALQNYEGGTKVL-HNEGNFGDPLSLYLRALCREGR 165
+ EAI+ + + V+ HN + LR++C GR
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHN---------IILRSMCSTGR 324
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KA H A+E+ EME G + +N L+S G+ E A A + ME MKPD
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG--MKPD 347
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
TY +I RA D + E M+ K PN+ TY L++
Sbjct: 348 VVTYTTLISGLDRAGKIDAA--IVEYDEMVRNGCK---PNLCTYNALIK 391
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATF--ENMEYGEDYM 63
C+ G A ++ EM + + L+ + C + A F ENM+ +
Sbjct: 300 CRLGRIEEAKQLFKEMATKSCLPDRITYTCLV--RGFCNASRLEEARFLLENMKTAAG-I 356
Query: 64 KPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAV 123
PD TY+ V+ Y+RA+ R + AE + M+ + + PN TY+ L++ K V
Sbjct: 357 DPDVVTYSIVVAGYSRAK---RFVEAAEFIQEMIA--RNVAPNAVTYSSLIDGLCKAGRV 411
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
A+ + + N +V + G F + ALCR G + E + L AMA
Sbjct: 412 DHAMEVLKNMVN----KRVEPSVGTFNSVIG----ALCRLGDMDEAWKLLVAMA 457
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 16/186 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAGD AL++ M + G + + L+ C +V A E P
Sbjct: 230 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLI--HGLCAAHKVDAARLLMDEMTATCCPP 287
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
DT +YN ++ Y R R+++ +L M K P+ TY LV F + E
Sbjct: 288 DTVSYNALLDGYCR---LGRIEEAKQLFKEMAT--KSCLPDRITYTCLVRGFCNASRLEE 342
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
A R L+N + + + + ++ Y RA R +E E ++ M N V P
Sbjct: 343 A-RFL--LENMKTAAGIDPDVVTYSIVVAGYSRA----KRFVEAAEFIQEMIARN--VAP 393
Query: 186 RAMILS 191
A+ S
Sbjct: 394 NAVTYS 399
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G A E+ EM+ G F F+ L++ + A ++ + + KP
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW-KP 182
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TY +I + ++ + ++ ++LG+M + ++ PNV TY+ L+ K + +
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAM---KMLGVM--EGRKCVPNVVTYSSLLHGLCKAGDLDQ 237
Query: 126 AIRHFRALQN 135
A+ FR + +
Sbjct: 238 ALDLFRRMTS 247
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I +AG +LE+ +M G ++ L++ + AF E ME
Sbjct: 305 LINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAG 364
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P+ TYN V+ ++ D V V E MM++ R P+V TY++++ +K
Sbjct: 365 S--PPNVVTYNSVMDGLCKSGKMDEVHRVYE---MMLKS--RCSPDVVTYSIIMNGLSKA 417
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
+ A++ F +++ EG S+ + +LCR G++
Sbjct: 418 GMLDSAVKLFELIKS--------SREGPDAAAYSMVITSLCRAGKL 455
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKAG+ A+ + +M G F L+ G + A E M +
Sbjct: 299 LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR--K 356
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++P YN +I Y + D + EL+ M + KR++P+V TY+ ++ + Y
Sbjct: 357 CGIQPSVVCYNALINGYCKLGRMDLAR---ELIREM--EAKRVKPDVVTYSTII---SGY 408
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRIIELLEALEAM 176
C V F+ Q K+L +G D + S +R LC E R+ + E E M
Sbjct: 409 CKVGNLDSAFQLNQ------KML-KKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
>gi|413953500|gb|AFW86149.1| hypothetical protein ZEAMMB73_846563 [Zea mays]
Length = 1039
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
M++ KAG H A + M+ G FN +++ AT G+ A + F+ M+ +
Sbjct: 822 MLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLFSEAKSVFQEMQ--D 879
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
PD+ +Y +I+AYT A+ Y + E + M P+ ++ L+ F K
Sbjct: 880 CGHAPDSFSYLALIRAYTEAKLYTEAE---EAIRTMTLSSSNTTPSCPHFSHLILAFLKE 936
Query: 121 CAVTEAIRHF 130
V EA R +
Sbjct: 937 GRVGEARRIY 946
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++A CK D+ AL + +ME++ + + L+ G+ E A TF +E +
Sbjct: 354 LLALHCKNEDYPKALALFSDMESSKVIPDEVIYGILIRIYGKLGLYEEARQTFGEIE--K 411
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ D +TY + Q + A DR +V E + + ++P+ +Y+ L+ C
Sbjct: 412 AGLLNDEQTYVAMAQVHLNAGDCDRALEVLESM-----KTRGVKPSRFSYSALLRCHVAK 466
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLR 158
V A FRAL + G L + D L LY+R
Sbjct: 467 EDVVAAEDTFRALSQSQHG---LPDAFCCNDMLRLYMR 501
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 33 FNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAEL 92
+NH++S + G A F+ M+ E PD T+N +I Y+R + VQ+ L
Sbjct: 813 YNHMISLYSKLGSYRKAALVFKGMQ--EIGCSPDATTFNTLIMLYSRNQ---MVQEAQAL 867
Query: 93 LGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTK 141
L M++ PN+ TY L+ + + A +A F+++ E G K
Sbjct: 868 LREMIKTGN--APNISTYTTLISAYGRLQAYEDAELVFKSIA--ETGCK 912
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 12 SNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYN 71
S+A+ I EM+ G + +N ++S G E A + F M+ E PD TYN
Sbjct: 202 SDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQ--EQGFTPDAVTYN 259
Query: 72 CVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
V+ A+ R R+++V + GMM + R + TY ++ + K
Sbjct: 260 SVLHAFARD---GRIEEVERIRGMMRD--ARCSSDEITYNTMIHMYGK 302
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I +AG +LE+ +M G ++ L++ + AF E ME
Sbjct: 305 LINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAG 364
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
P+ TYN V+ ++ D V V E MM++ R P+V TY++++ +K
Sbjct: 365 S--PPNVVTYNSVMDGLCKSGKMDEVHRVYE---MMLKS--RCSPDVVTYSIIMNGLSKA 417
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
+ A++ F +++ EG S+ + +LCR G++
Sbjct: 418 GMLDSAVKLFELIKS--------SREGPDAAAYSMVITSLCRAGKL 455
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 20 EMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTR 79
+M + G T FN ++ G E A FE+M+ E + PD TYN +I Y R
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE--ISPDVITYNTMINGYYR 197
Query: 80 AESYDRVQD-VAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNY 136
+ + + E+ G K ++PNV TY L++ + V +A+R ++ Y
Sbjct: 198 VKKMEEAEKYFVEMKG------KNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGY 249
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 34/210 (16%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
++ C+ G A + M+ G T +N L+S A G + A E M +G
Sbjct: 251 LLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFG 310
Query: 60 EDYMKPDTETYNCVIQAYTRAESYD---RVQDVAELLGMMVEDHKRLQPNVKTYALLVEC 116
+PD TYN + +A D +++D E L ++ P+V TY LV+
Sbjct: 311 ---FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIV-------SPDVVTYNTLVDA 360
Query: 117 FTKYCAVTEAIRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEAL 173
KY ++A+ ++ + G K V HN + ++ LCREG++ E L L
Sbjct: 361 CFKYQRSSDALNLLEEMR--DKGVKSSLVTHN---------IVVKGLCREGQLEEALGRL 409
Query: 174 EAMAKDNQPVPPRAMILSRKYRTLVSSWIE 203
+ M ++ + P + Y TL+ ++ +
Sbjct: 410 KMMTEEG--LAPDVIT----YNTLIDAYCK 433
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKAG+ A+ + +M G F L+ G + A E M +
Sbjct: 299 LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR--K 356
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++P YN +I Y + D + EL+ M + KR++P+V TY+ ++ + Y
Sbjct: 357 CGIQPSVVCYNALINGYCKLGRMDLAR---ELIREM--EAKRVKPDVVTYSTII---SGY 408
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRIIELLEALEAM 176
C V F+ Q K+L +G D + S +R LC E R+ + E E M
Sbjct: 409 CKVGNLDSAFQLNQ------KML-KKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Query: 16 EIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
EI +++ AG + +N L+ + G P A F M++ +PD +YN ++
Sbjct: 329 EIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMG--CEPDRASYNIMVD 386
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRL--QPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
AY RA ++ Q V E++ KRL P +K++ LL+ +++ V +
Sbjct: 387 AYGRAGLHEDAQAVFEVM-------KRLGITPTMKSHMLLLSAYSRAGKVAKC------- 432
Query: 134 QNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDNQP 182
E +H G D L L R G+ ++ E L AM K P
Sbjct: 433 ---EEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYP 480
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KA AL++ +EM + F L++ A G+ E A FE ++ E ++PD
Sbjct: 285 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ--EAGLEPD 342
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
YN +++AY+RA AE+ +M H +P+ +Y ++V+ + + +A
Sbjct: 343 VYAYNALMEAYSRA---GFPYGAAEIFSLM--QHMGCEPDRASYNIMVDAYGRAGLHEDA 397
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPR 186
F ++ G T + + L L A R G++ + E + M K + P
Sbjct: 398 QAVFEVMKRL-GITPTMKSH-------MLLLSAYSRAGKVAKCEEIVNQMHKSG--IKPD 447
Query: 187 AMILS 191
+L+
Sbjct: 448 TFVLN 452
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 33 FNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAEL 92
+NH++S + G A F+ M+ E PD T+N +I Y+R + VQ+ L
Sbjct: 824 YNHMISLYSKLGSYRNAALVFKGMQ--EIGCSPDATTFNTLIMLYSRNQ---MVQEAQAL 878
Query: 93 LGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTK 141
L M++ PN+ TY L+ + + A +A F+++ E G K
Sbjct: 879 LREMIKTGN--APNISTYTTLISAYGRLQAYEDAELVFKSIA--ETGCK 923
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 32/155 (20%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM---- 56
MI KAG H A E+ +M+ GR + F L+ G A A FE+M
Sbjct: 307 MIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQ 366
Query: 57 -------------EYGEDYMKPDTE-TYNCVIQAYTRAE--SYDRVQDVAELLGM----- 95
Y + M D E TY+C+++A R + +Y + DV GM
Sbjct: 367 VRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCI 426
Query: 96 -----MVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
MV L+P + YA++V F + +V E
Sbjct: 427 ILYKAMVGSG--LKPELSVYAIMVRVFYQKSSVAE 459
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 12 SNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYN 71
S+A+ I EM+ G + +N ++S G E A + F M+ E PD TYN
Sbjct: 213 SDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQ--EQGFTPDAVTYN 270
Query: 72 CVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
V+ A+ R R+++V + GMM + R + TY ++ + K
Sbjct: 271 SVLHAFARD---GRIEEVERIRGMMRD--ARCSSDEITYNTMIHMYGK 313
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 16 EIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
E+ EM+ AG + +N L+ + G P+ A F M++ +PD +YN ++
Sbjct: 140 EVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMG--CEPDRASYNILVD 197
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQN 135
AY RA + + V E L + + P +K++ LL+ + V
Sbjct: 198 AYGRAGLHREAEAVFESL-----KRQGMAPTMKSHMLLLAAHARSGNVARC--------- 243
Query: 136 YEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAM 176
E LH G D ++L L A R GR+ ++ L AM
Sbjct: 244 -EEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAM 285
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 13 NALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNC 72
+A+++ EM++ G A + L++ A G+ E A FE M+ +PD YN
Sbjct: 102 SAMKVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQAGH--EPDVYAYNA 159
Query: 73 VIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+++AY+RA Q +E+ +M H +P+ +Y +LV+ + +
Sbjct: 160 LMEAYSRA---GFPQAASEIFSLM--QHMGCEPDRASYNILVDAYGR 201
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 74/187 (39%), Gaps = 31/187 (16%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTF-HFNHLLSCQATCGIPEVAFATFENMEYGEDYMK 64
CK GD + ALE+ EME GR+A +N LL+ G A +M + +
Sbjct: 181 CKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMT--KRRIN 238
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVED------------------HKRLQPN 106
PD T+ +I A+ + + D Q EL M++ H RL
Sbjct: 239 PDVFTFTALIDAFVKQGNLDEAQ---ELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHA 295
Query: 107 VKTYALLVE--CFTKYCAVTEAIRHFRALQNYEGGTKV---LHNEGNFGDPLSL--YLRA 159
KT+ L+ CF I F + E G K+ ++ EG GD + +
Sbjct: 296 KKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHG 355
Query: 160 LCREGRI 166
C+ G++
Sbjct: 356 YCQVGKL 362
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KAG H NA+++ +M+ AG TF ++ ++ C G A FE M E P
Sbjct: 149 KAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMV--ERGFAPS 206
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR---LQPNVKTYALLVECFTKYCAV 123
TYN +I ++ +Y ++ M + + + P+ TY++++E + +
Sbjct: 207 LVTYNIIIDLQAKSGNY--------VMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHL 258
Query: 124 TEA 126
EA
Sbjct: 259 QEA 261
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 157/421 (37%), Gaps = 66/421 (15%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMK 64
C+ G A+++ +M G A T N +++ G + AF NM YG
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG---CS 352
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PDT +Y V++ RAE R +D ELL MV K PN T+ + + +
Sbjct: 353 PDTISYTTVLKGLCRAE---RWEDAKELLKEMV--RKNCPPNEVTFNTFICILCQKGLIE 407
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
+A + + ++ + C +GR+ LE +M P
Sbjct: 408 QATMLIEQMSEHGCEVNIVTYNA--------LVNGFCVQGRVDSALELFYSM-----PCK 454
Query: 185 PRAMILSRKYRTLVSSWI--EPLQEEAELGYEI------------DYIARYISEGGLTGE 230
P + Y TL++ E L AEL E+ + + + + GL E
Sbjct: 455 PNTI----TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510
Query: 231 RKRWVPRRGKTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEG------- 283
V + + P+ + + N + C + +LL L + G
Sbjct: 511 AIELVEQMMEHGCTPNLITY---NTLLDGITNDC---NSEEALELLHGLVSNGVSPDIVT 564
Query: 284 -PAVLGDVSESDYVRVEERLKKLIKGPEQHVLKPKAA--SKMVVSELKEELDAQGLPTDG 340
+++G +S D RVEE + K+ + ++PKA +K++++ K TDG
Sbjct: 565 YSSIIGVLSRED--RVEEAI-KMFHIVQDLGMRPKAVIYNKILLALCKR------CNTDG 615
Query: 341 TRNVLYQRVQKARRINRSRGRPLWVPPVEEE-EEEVDEEVDELISRIKLEEGNTEFWKRR 399
+ V N L E+ +E + + EL SR L + E W+ +
Sbjct: 616 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEEWRPK 675
Query: 400 F 400
F
Sbjct: 676 F 676
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD +AL + +M+ + A ++ ++ G A F M E + P
Sbjct: 56 CKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMH--EKGIFP 113
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TYNC+I Y SY + D +LL M+E + + P+V T++ L+ F K V+
Sbjct: 114 NVLTYNCMIDGYC---SYGKWSDAEQLLRDMIE--RNIDPDVVTFSALINAFVKEGKVSG 168
Query: 126 AIRHFRAL 133
A +R +
Sbjct: 169 AEELYREM 176
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KA H A+E+ EME G + +N L+S G+ E A A + ME MKPD
Sbjct: 272 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG--MKPD 329
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
TY +I RA D + E M+ K PN+ TY L++
Sbjct: 330 VVTYTTLISGLDRAGKIDAA--IVEYDEMVRNGCK---PNLCTYNALIK 373
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK GD AL + +MEAA A ++ ++ + A F ME ++P
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME--NKGVRP 286
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ TY+ +I +Y R D + LL M+E +++ PN+ T++ L++ F K
Sbjct: 287 NVITYSSLISCLC---NYGRWSDASRLLSDMIE--RKINPNLVTFSALIDAFVK 335
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M+A G + + L+ G ++A FE M+ E +PD TY C++ Y A
Sbjct: 390 MKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQ--EARCQPDVATYTCLLVGYGNA 447
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ DRV V E + K P+ +TY L++ T
Sbjct: 448 KRMDRVTAVLEEM-----TQKGCPPDARTYNALIKLLTN 481
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 158/421 (37%), Gaps = 66/421 (15%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMK 64
C+ G A+++ +M G A T N +++ G + AF NM YG
Sbjct: 327 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG---CS 383
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PDT +Y V++ RAE R +D ELL MV K PN T+ + + +
Sbjct: 384 PDTISYTTVLKGLCRAE---RWEDAKELLKEMV--RKNCPPNEVTFNTFICILCQKGLIE 438
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
+A + + ++ + C +GR+ LE +M P
Sbjct: 439 QATMLIEQMSEHGCEVNIVTYNA--------LVNGFCVQGRVDSALELFYSM-----PCK 485
Query: 185 PRAMILSRKYRTLVSSWI--EPLQEEAELGYEI------------DYIARYISEGGLTGE 230
P + Y TL++ E L AEL E+ + + + + GL E
Sbjct: 486 PNTI----TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 541
Query: 231 RKRWVPRRGKTPLDPDAVGFIYSNPMETSFKQRCLEDGKKYHRKLLRTLQNEG------- 283
V + + P+ + + N + + C + +LL L + G
Sbjct: 542 AIELVEQMMEHGCTPNLITY---NTLLDGITKDC---NSEEALELLHGLVSNGVSPDIVT 595
Query: 284 -PAVLGDVSESDYVRVEERLKKLIKGPEQHVLKPKAA--SKMVVSELKEELDAQGLPTDG 340
+++G +S D RVEE + K+ + ++PKA +K++++ K TDG
Sbjct: 596 YSSIIGVLSRED--RVEEAI-KMFHIVQDLGMRPKAVIYNKILLALCKR------CNTDG 646
Query: 341 TRNVLYQRVQKARRINRSRGRPLWVPPVEEE-EEEVDEEVDELISRIKLEEGNTEFWKRR 399
+ V N L E+ +E + + EL SR L + E W+ +
Sbjct: 647 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEEWRPK 706
Query: 400 F 400
F
Sbjct: 707 F 707
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 22/180 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G S+A + E +G F +N L++ G + A +M
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--- 171
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY +I+ RV + LL M+ H+ QP+V TY +L+E K
Sbjct: 172 --VAPDAYTYTPIIRGLC---DRGRVGEALSLLDDML--HRGCQPSVVTYTVLLEAVCKS 224
Query: 121 CAVTEAIRHFRALQNYEGGTK--VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
+A+ ++ +G T V +N + + +CREGR+ + E L ++
Sbjct: 225 TGFGQAMEVLDEMR-AKGCTPNIVTYN---------VIINGMCREGRVDDAREFLNRLSS 274
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK +A ++ +ME G F +N L+SC G A +M E + P
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML--EKNINP 318
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D +N +I A+ + ++ + +L MV+ K P+V Y L++ F KY V E
Sbjct: 319 DLVFFNALIDAFVKE---GKLVEAEKLYDEMVKS-KHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 126 AIRHFRALQ 134
+ FR +
Sbjct: 375 GMEVFREMS 383
>gi|357503345|ref|XP_003621961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496976|gb|AES78179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 24/169 (14%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
AL + +M + G + +N L+ C + G+ E A FE + KPD T+ +
Sbjct: 268 ALRLEQKMNSVGIVPDLVFYNMLIDCLSKSGMHEEAIRVFEQKNF-----KPDKYTFTSL 322
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
+ A R+E +D LL +V+ K + + LV C + +A RAL
Sbjct: 323 LSAICRSEQFD-------LLPKLVQHCKHISRD------LVFCNALLISYVKAGYSSRAL 369
Query: 134 QNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDN 180
+ YE + +EG D + L ALC E R E ++ A+ D+
Sbjct: 370 ELYER----MISEGFKPDKYTFAGLLSALCAENRNDEAVKVWRAVTMDH 414
>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G+ + A+++ EM+ G H+ L++ G + A FE M ++P
Sbjct: 116 CKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKAN--IEP 173
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN + + ++ V +V +LL M DH L+PN TY + + F + ++E
Sbjct: 174 DIVTYNILASGFCKS---GLVMEVFDLLDRMA-DHG-LEPNSLTYGIAIVGFCRGGNLSE 228
Query: 126 A 126
A
Sbjct: 229 A 229
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 15/177 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+IA C+ GD S A+E+ +M G T+ F L++ + A F M E
Sbjct: 448 VIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMT--E 505
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
++P+ T+N VI+ Y ++ +L M+ + L P+ TY L+ +
Sbjct: 506 SNLEPNEVTFNAVIEGYCLVGD---IRKAFQLYDQMM--CRGLTPDNYTYRSLI---SGL 557
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
C A + + + E VL+ L+ L CREGR+ E MA
Sbjct: 558 CLTDGASKAKEFVADLENNCSVLNKFS-----LTALLHGFCREGRLTEAYHVWNEMA 609
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFA--TFENMEY 58
+I CKA A E+ EM G + T +N L+ C ++ A F+ M
Sbjct: 190 LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID--GFCKKKDLVAAKDVFDKMV- 246
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
P+ TY +I +++ +VQ AE+L MV+ K + PNV TY+ L++ F
Sbjct: 247 -RSNCVPNVVTYTTLIDGLSKS---GKVQAAAEVLDGMVK--KGVTPNVATYSCLIDGFC 300
Query: 119 KYCAVTEAIRHF-RALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
K V EA + + + T V +N + L +LCR ++ + + MA
Sbjct: 301 KVRRVDEAHKLLEQMVTQGIAPTVVTYN---------ILLNSLCRADKLEDAFKLFRGMA 351
Query: 178 K 178
+
Sbjct: 352 Q 352
>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 2 IAED--CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
IA D CK G+ + A+++ EM+ G H+ L+S G + A FE M
Sbjct: 522 IAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKA 581
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
++PD TYN + + ++ V +V +LL M + + L+PN TY + + F +
Sbjct: 582 N--IEPDIVTYNILASGFCKS---GLVMEVFDLLDRMAD--QGLEPNSLTYGIAIVGFCR 634
Query: 120 YCAVTEA 126
++EA
Sbjct: 635 GGNLSEA 641
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G AL++ ++ G TT +N L+ G + FA E ME
Sbjct: 372 LINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEME--R 429
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ + PD TYNC+I R + + + + + L +K L P++ T+ +L+E Y
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL-----TNKGL-PDLVTFHILME---GY 480
Query: 121 CAVTEAIRHFRALQNY-EGGTKVLHNEGNFGDPLSLYLRALCREGRI 166
C+ E+ + L+ + G K H N + ++ C+EG +
Sbjct: 481 CSRGESRKAAMLLKEMSKMGLKPRHLTYN------IMMKGYCKEGNL 521
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
M+A G + + L+ G ++A FE M+ E +PD TY C++ Y A
Sbjct: 392 MKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQ--EAKCQPDVATYTCLLVGYGNA 449
Query: 81 ESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
+ DRV V E + K P+ +TY L++ T +A R ++ +
Sbjct: 450 KQMDRVTAVLEEM-----TQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKM 497
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMK 64
CK G ++A+++ M G + +N LLS G+ AF M E G+ K
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK---K 240
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
D TYN +++ +V + +L M ++ L+PNV T+ +L+ K +T
Sbjct: 241 ADVVTYNTLMKGLC---DKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 297
Query: 125 EAIR-HFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLE 171
+A++ H + ++ G V +N + L + G+I E +E
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYN---------MLLGGCLKAGKIKEAME 336
>gi|212275500|ref|NP_001130935.1| uncharacterized protein LOC100192040 [Zea mays]
gi|194690482|gb|ACF79325.1| unknown [Zea mays]
Length = 380
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KA E+ +M + G M + L+ G + A+ + M G
Sbjct: 159 MIVALAKADRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLDAAYRVLDEM--GR 216
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTY 110
PD TYNC + + S+ + D EL M+E H +P+V TY
Sbjct: 217 AGFPPDIVTYNCFLNVFC---SHRKADDALELCERMIEAH--CEPSVHTY 261
>gi|413932624|gb|AFW67175.1| hypothetical protein ZEAMMB73_588183 [Zea mays]
Length = 520
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI KA E+ +M + G M + L+ G + A+ + M G
Sbjct: 299 MIVALAKADRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLDAAYRVLDEM--GR 356
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTY 110
PD TYNC + + S+ + D EL M+E H +P+V TY
Sbjct: 357 AGFPPDIVTYNCFLNVFC---SHRKADDALELCERMIEAH--CEPSVHTY 401
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Query: 16 EIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQ 75
EI +++ AG + +N L+ + G P A F M++ +PD +YN ++
Sbjct: 259 EIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMG--CEPDRASYNIMVD 316
Query: 76 AYTRAESYDRVQDVAELLGMMVEDHKRL--QPNVKTYALLVECFTKYCAVTEAIRHFRAL 133
AY RA ++ Q V E++ KRL P +K++ LL+ +++ V +
Sbjct: 317 AYGRAGLHEDAQAVFEVM-------KRLGITPTMKSHMLLLSAYSRAGKVAKC------- 362
Query: 134 QNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDNQP 182
E +H G D L L R G+ ++ E L AM K P
Sbjct: 363 ---EEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYP 410
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KA AL++ +EM + F L++ A G+ E A FE ++ E ++PD
Sbjct: 215 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ--EAGLEPD 272
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
YN +++AY+RA AE+ +M H +P+ +Y ++V+ + + +A
Sbjct: 273 VYAYNALMEAYSRA---GFPYGAAEIFSLM--QHMGCEPDRASYNIMVDAYGRAGLHEDA 327
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPPR 186
F ++ G T + + L L A R G++ + E + M K + P
Sbjct: 328 QAVFEVMKRL-GITPTMKSH-------MLLLSAYSRAGKVAKCEEIVNQMHKSG--IKPD 377
Query: 187 AMILS 191
+L+
Sbjct: 378 TFVLN 382
>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 34/211 (16%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C G +A+E+ EM++ H+ L++ G AF F+ M+ E +KP
Sbjct: 416 CMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMK--EKGLKP 473
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN + +R ++ +LL M + + ++PN T+ +++E V E
Sbjct: 474 DIVTYNVLAAGLSRN---GHARETVKLLDFM--ESQGMKPNSTTHKMIIEGLCSGGKVLE 528
Query: 126 AIRHFRAL----------------------QNYEGGTKVLHNEGNFGDPLSLY--LRALC 161
A +F +L ++YE K+L N+G+ S + L LC
Sbjct: 529 AEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLL-NQGDMAKKASCFKLLSKLC 587
Query: 162 REGRIIELLEALEAMAKDNQPVPPRAMILSR 192
G I + ++ L+ M N V P ++ S+
Sbjct: 588 MTGDIEKAVKLLDRMLLSN--VEPSKIMYSK 616
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHL-LSCQATCGIPEVAFATFENMEYGEDYMK 64
CK G S+A + +ME G T +N L L + I E+ E E G +
Sbjct: 571 CKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKG---IS 627
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
PD TYN +I + +D LL M++ K + PNV ++ +L++ F+K
Sbjct: 628 PDICTYNNIITCLCEG---GKAKDAISLLHEMLD--KGISPNVSSFKILIKAFSKSSDFK 682
Query: 125 EAIRHFRALQNYEGGTKVLHN 145
A F N G + L++
Sbjct: 683 VACELFEVALNICGRKEALYS 703
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLS--CQATCGIPEVAFATFENM-E 57
++ CK + A+++ EM G +N +L+ CQ G E A +N+
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE--GRVEDAMEFLKNLPS 264
Query: 58 YGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECF 117
YG +P+T +YN V++ AE ++ + + E + HK PNV T+ +L+
Sbjct: 265 YG---CEPNTVSYNIVLKGLFTAERWEDAEKLMEEMA-----HKGCPPNVVTFNMLISFL 316
Query: 118 TKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
+ V A+ + Y G T N ++ +PL L A C++ +I + +E +E M
Sbjct: 317 CRRGLVEPAMEVLEQMPQY-GCTP---NSLSY-NPL---LHAFCKQKKIHKAMEFVELM 367
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 28/177 (15%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+GD A ++ EME G F +N L+S + A + + ME + PD
Sbjct: 215 KSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME--RSGVAPD 272
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELL----GMMVEDHKRLQPNVKTYALLVECFTKYCA 122
TYN +I ++R R+++ L G+++ +H TY L++ + +
Sbjct: 273 IVTYNSLIHGFSRE---GRMREATRLFRKIKGVVMANH-------VTYTTLIDGYCRMND 322
Query: 123 VTEAIRHFRALQNYEGGTK--VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+ EA+R R + G V +N LR LC +GRI E L M+
Sbjct: 323 IDEALR-LREVMESRGFCPGVVTYNS---------ILRKLCEDGRIREANRLLTEMS 369
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK+GD A ++ EME+ F +N L+S G+ A + ME G
Sbjct: 228 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 287
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMM-VEDHKRLQPNVKTY 110
+ PD TYN +I + R V D+ E L + V + + L P V TY
Sbjct: 288 --VSPDIVTYNSLIYGFCR-----EVNDLEEALRLREVMEVEGLHPGVVTY 331
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+ S+A I +M AG +N L++ G + A F M E+ P
Sbjct: 113 CKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQML--ENSCSP 170
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
D TYN +I Y + E R QD A+LL MV+ +PN TY L++ K
Sbjct: 171 DVFTYNILIDGYCKQE---RPQDGAKLLQEMVK--YGCEPNFITYNTLMDSLVK 219
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 19/162 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+G + +A +A M + F FN ++ G ++A+ F+ M + PD
Sbjct: 219 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT--DRGCLPD 276
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN +I RA +R+ D +LL M E P+V TY +V K V EA
Sbjct: 277 IYTYNIMISGACRA---NRIDDARQLLERMTE--AGCPPDVVTYNSIVSGLCKASQVDEA 331
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRI 166
+ +VL N G F D + S + LC+ R+
Sbjct: 332 YEVY----------EVLRNGGYFLDVVTCSTLIDGLCKSRRL 363
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ +A+++ +ME G +N ++ G+ A F+ ME
Sbjct: 145 LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME--R 202
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D ++ D TYN ++ + R D A L+ MV + + PNV T+ +++ F K
Sbjct: 203 DGVRADAVTYNSLVAGLCCS---GRWSDAARLMRDMV--MRDIVPNVITFTAVIDVFVKE 257
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+EA++ YE T+ + F + + LC GR+ E + L+ M
Sbjct: 258 GKFSEAMKL------YEEMTRRCVDPDVF--TYNSLINGLCMHGRVDEAKQMLDLMV 306
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 22/167 (13%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK+G+ ALE+ M A + T +N +L G + A + E
Sbjct: 182 LIGGYCKSGEIDKALEVLERMSVAPDVVT---YNTILRSLCDSGKLKEAMEVLDRQLQRE 238
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKR-LQPNVKTYALLVECFTK 119
Y PD TY +I+A V + + ++ E K+ +P+V TY +L+ K
Sbjct: 239 CY--PDVITYTILIEATCNDSG------VGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 290
Query: 120 YCAVTEAIRHFRALQNYEGGTKVL-HNEGNFGDPLSLYLRALCREGR 165
+ EAI+ + +Y V+ HN + LR++C GR
Sbjct: 291 EGRLDEAIKFLNNMPSYGCKPNVITHN---------IILRSMCSTGR 328
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G A E+ EM G + L+ G E AF F + +
Sbjct: 300 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSD 359
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
Y KP+ TY +I Y + + +R + LL M E + L PN TY L++ +
Sbjct: 360 GY-KPNVHTYTAMINGYCKEDKLNRAE---MLLSRMQE--QGLVPNTNTYTTLID---GH 410
Query: 121 CAVTEAIRHF 130
C V +R +
Sbjct: 411 CKVGNFVRAY 420
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ +A+++ +ME G +N ++ G+ A F+ ME
Sbjct: 86 LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME--R 143
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D ++ D TYN ++ + R D A L+ MV + + PNV T+ +++ F K
Sbjct: 144 DGVRADAVTYNSLVAGLCCS---GRWSDAARLMRDMV--MRDIVPNVITFTAVIDVFVKE 198
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+EA++ YE T+ + F + + LC GR+ E + L+ M
Sbjct: 199 GKFSEAMKL------YEEMTRRCVDPDVF--TYNSLINGLCMHGRVDEAKQMLDLMV 247
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAG+ S AL + E+E + F ++ L+ + CG+ + A E + P
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILI--KGLCGVDRMEEADGLLQEMKKKGFLP 401
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ TYN +I Y + + ++ +V M E K ++PN+ T++ L++ + K
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCS---QMTE--KGIEPNIITFSTLIDGYCK 450
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK ALE+ EM G + F L+ C E+ A ++ + P
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVVTFGILI--DGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMM--VEDHKRLQPNVKTYALLVECFTKYCAV 123
+ YNC+I Y +A +++E L + +E H+ L P+V TY++L++ C V
Sbjct: 332 NIFVYNCLIDGYCKA------GNLSEALSLHSEIEKHEIL-PDVFTYSILIK---GLCGV 381
Query: 124 TEAIRHFRALQNYEGGTKVLHNEGNFGDPLSL--YLRALCREGRIIELLEALEAMAKDNQ 181
++ +G + + +G + ++ + C+EG + + +E M + +
Sbjct: 382 DR-------MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE--K 432
Query: 182 PVPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIAR 220
+ P + S TL+ + + + EA +G + + +
Sbjct: 433 GIEPNIITFS----TLIDGYCKAGKMEAAMGLYTEMVIK 467
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I K+GD S AL++ +A G A T ++S A G A A FE E +
Sbjct: 246 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFE--ELRQ 303
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP T YN +++ Y + ++D ++ M + + + P+ TY+LL++ +
Sbjct: 304 SGIKPRTRAYNALLKGYVKTGP---LKDAESMVSEM--EKRGVSPDEHTYSLLIDAYVN 357
>gi|449444598|ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Cucumis sativus]
Length = 1062
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 33 FNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAEL 92
+ +L+SC G A F+ M E+ +KP +YN ++ Y A ++ ++ L
Sbjct: 846 YTNLISCYGKAGKTHEASLLFKEML--EEGVKPGMVSYNIMVNVYANAGLHEETEN---L 900
Query: 93 LGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDP 152
L M +D + P+ TY L+ +T+ C +EA + ++Q T H +
Sbjct: 901 LKAMEQD--AIVPDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTTCAHYD------ 952
Query: 153 LSLYLRALCREGRI 166
L L AL + G I
Sbjct: 953 --LLLSALAKAGMI 964
>gi|224132330|ref|XP_002328242.1| predicted protein [Populus trichocarpa]
gi|222837757|gb|EEE76122.1| predicted protein [Populus trichocarpa]
Length = 893
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 2 IAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENME-YGE 60
++ C+ G +AL+ M AG + F FN L+ G+ E + E M+ +G
Sbjct: 487 VSALCEGGKTESALDCLENMVNAGCVPLLFTFNSLIKRLFQDGLSEDVKSLIEIMQNWG- 545
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVE-DHKRLQPNVKTYALLVECFTK 119
+ P+ ETY ++ Y + E D+A G++ + D L+P+V Y ++ C ++
Sbjct: 546 --ISPNLETYLIMVNEYCKQE------DLALAFGILEQMDEMGLKPSVAIYDCIIACLSQ 597
Query: 120 YCAVTEAIRHF-RALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
++EA F R L+N +V + + A R G+ ++ L E M K
Sbjct: 598 QRRISEAETLFCRMLENGVDPDEVAYMT---------MINAYARNGKGVKALHLFEMMIK 648
Query: 179 D 179
+
Sbjct: 649 N 649
>gi|116789832|gb|ABK25404.1| unknown [Picea sitchensis]
Length = 278
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI+ KA + NA++I ++ +G +++++SC G + A F M+ +
Sbjct: 16 MISVYGKARELQNAVQIFNSLQKSGLSVDEKTYSNMISCYGKAGFFQDAAKLFSRMQ--Q 73
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ +KP TYN ++ AY R+ + R ++V M E + P+ TY L+
Sbjct: 74 EGIKPGKVTYNTMLDAYARSGLHTRAEEVFN--DMQDEGY---SPDSYTYLSLI------ 122
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEG 147
CA T R Q E K +H +G
Sbjct: 123 CAYTNCQR----FQEAEDLLKRMHRQG 145
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 2 IAEDCKAG--DHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
+ + C G D + A EI EM G FN LL+ G+ E A F M Y
Sbjct: 261 VIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLY- 319
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
++ D TYN ++ A + D + M K + PNV TY+ +++ + K
Sbjct: 320 -RGIEQDIFTYNTLLDAVCKGGQMDLAFQI-----MSEMPRKHIMPNVVTYSTVIDGYAK 373
Query: 120 YCAVTEAIRHFRALQ 134
+ EA+ F ++
Sbjct: 374 AGRLDEALNLFNEMK 388
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK A ++ EM G + + +N L+ G+ + AF + ME + P
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME--SNSCGP 402
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+T TYN +I + +V LL M+E ++L P++ TY L+ C V +
Sbjct: 403 NTRTYNELICGLCKKR---KVHKAMALLNKMLE--RKLSPSLITYNSLIH---GQCKVND 454
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGD--PLSLYLRALCREGRI 166
+R L +++ G D S+++ LC+EGR+
Sbjct: 455 LESAYRLLS-------LMNENGLVPDQWTYSVFIDTLCKEGRV 490
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I K+GD S AL++ +A G A T ++S A G A A FE E +
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFE--ELRQ 332
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+KP T YN +++ Y + ++D ++ M + + + P+ TY+LL++ +
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGP---LKDAESMVSEM--EKRGVSPDEHTYSLLIDAYVN 386
>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 2 IAED--CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYG 59
IA D CK G+ + A+++ EM+ G H+ L+S G + A FE M
Sbjct: 404 IAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKA 463
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
++PD TYN + + ++ V +V +LL M + + L+PN TY + + F +
Sbjct: 464 N--IEPDIVTYNILASGFCKS---GLVMEVFDLLDRMAD--QGLEPNSLTYGIAIVGFCR 516
Query: 120 YCAVTEA 126
++EA
Sbjct: 517 GGNLSEA 523
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CK G A E+ EM G + L+ G E AF F + +
Sbjct: 300 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSD 359
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
Y KP+ TY +I Y + + +R + LL M E + L PN TY L++ +
Sbjct: 360 GY-KPNVHTYTAMINGYCKEDKLNRAE---MLLSRMQE--QGLVPNTNTYTTLID---GH 410
Query: 121 CAVTEAIRHF 130
C V +R +
Sbjct: 411 CKVGNFVRAY 420
>gi|293334337|ref|NP_001169631.1| uncharacterized protein LOC100383512 [Zea mays]
gi|224030539|gb|ACN34345.1| unknown [Zea mays]
gi|413953501|gb|AFW86150.1| hypothetical protein ZEAMMB73_846563 [Zea mays]
Length = 790
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 10/158 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
++A CK D+ AL + +ME++ + + L+ G+ E A TF +E
Sbjct: 354 LLALHCKNEDYPKALALFSDMESSKVIPDEVIYGILIRIYGKLGLYEEARQTFGEIEKAG 413
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ D +TY + Q + A DR +V E + + ++P+ +Y+ L+ C
Sbjct: 414 --LLNDEQTYVAMAQVHLNAGDCDRALEVLESM-----KTRGVKPSRFSYSALLRCHVAK 466
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLR 158
V A FRAL + G L + D L LY+R
Sbjct: 467 EDVVAAEDTFRALSQSQHG---LPDAFCCNDMLRLYMR 501
>gi|224287051|gb|ACN41226.1| unknown [Picea sitchensis]
Length = 243
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 36/248 (14%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAG LE +M + L+S G + A F +M P
Sbjct: 11 CKAGRMQEGLEYLEKMGERNLSPNAASYAILMSGYIELGELQEAERLFGSMV--AKGCVP 68
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D YN ++ Y R + D LL MV + R P+V TYA+L++ F+K +
Sbjct: 69 DAVMYNTLLNKYFRE---GMIADAERLLDEMVVE--RRDPDVDTYAMLIDEFSKLGKLEG 123
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLY---LRALCREGRIIELLEALEAMAKDNQP 182
A++ F + E F + +Y LC+EG++ E + ++AM Q
Sbjct: 124 ALKIFGRMM-----------EVGFKPEVGVYNKWFGVLCKEGKLDEAQKLVQAMVDGGQ- 171
Query: 183 VPPRAMILSRKYRTLVSSW-IEPLQEEAELGYEIDYIARYISEGGLTGERKRWVPRRGKT 241
+A + + Y L+ + E EEA+ ++ +G LT E + R G
Sbjct: 172 ---KADVAT--YDVLIEGFGNEGRAEEAK-----SLFLEFLQKGCLTEEPE---ARLGGK 218
Query: 242 PLDPDAVG 249
P +P+ G
Sbjct: 219 PQEPNVAG 226
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CKAG +A+ + +M +G T +N L++ E A + +
Sbjct: 292 VISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLIL-- 349
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD T++ +I Y R D + + + +G+ +QPNV T+++++ K
Sbjct: 350 RHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGL-----HHIQPNVYTFSIIIHSLCKQ 404
Query: 121 CAVTEAIRHFRALQ 134
EA+ R L
Sbjct: 405 NRSAEALDILRELN 418
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 15/178 (8%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C G+ A+ + EM G ++ +++ G +A ME E
Sbjct: 168 LINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKME--E 225
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
KP+ Y +I + + V D +LL MV+ + + P+V TY+ ++ F
Sbjct: 226 KGCKPNLVAYTTIIDSLCKDT---LVNDAMDLLSEMVD--RGIPPDVVTYSTILHGFCSL 280
Query: 121 CAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
+ EA F + G V+ N F ++ + LC+EG + E EAM K
Sbjct: 281 GHLNEATILFNEMV----GRNVMPNTVTF----TILVDGLCKEGMVSEARCVFEAMTK 330
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 16/152 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK AL + +M+ +T+ FN+L+S G PE+ + M+ + + P
Sbjct: 155 CKEKMEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMK--KRSISP 212
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
DT TYN ++Q+Y R + + V E + ED +T Y +
Sbjct: 213 DTFTYNILMQSYARLNDIEGAERVLEEIKRENEDKL--------------SWTTYSNLAA 258
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYL 157
+ R + E K L E F D L+ +
Sbjct: 259 VYVNARLFEKAELALKKLEEEMGFHDRLAYHF 290
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 20/173 (11%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K+GD A ++ EME G F +N L+S + A + + ME + P+
Sbjct: 215 KSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME--RSGVAPN 272
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN I ++R R+++ L + +D + N TY L++ + + + EA
Sbjct: 273 IVTYNSFIHGFSRE---GRMREATRLFREIKDD---VTANHVTYTTLIDGYCRMNDIDEA 326
Query: 127 IRHFRALQNYEGGTK--VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
+R R + G + V +N LR LC +GRI E L M+
Sbjct: 327 LR-LREVMESRGFSPGVVTYNS---------ILRKLCEDGRIREANRLLTEMS 369
>gi|326527465|dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 23/168 (13%)
Query: 14 ALEIAYEMEAAGRMATTFHFN---HLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETY 70
A+E Y M G +T FN H+L C+ + +++ + ++ DT +
Sbjct: 126 AMETLYAMSEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRLG-----VELDTCCF 180
Query: 71 NCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHF 130
N +I+ + + R + LL M + R PN TY+ L+ + C V EA F
Sbjct: 181 NILIKGLCQ---FGRFNEALSLLDEMPKQDCR--PNAMTYSTLMHFLCRNCRVDEAFELF 235
Query: 131 RALQNYE-GGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMA 177
++ E V++N + + LCREGR+ + ++M+
Sbjct: 236 ERMRKEEIDADTVVYN---------ILVSGLCREGRVTSAYDLFKSMS 274
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMK 64
CK G ++A+++ M G + +N LLS G+ AF M E G+ K
Sbjct: 330 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK---K 386
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
D TYN +++ +V + +L M ++ L+PNV T+ +L+ K +T
Sbjct: 387 ADVVTYNTLMKGLCDK---GKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 443
Query: 125 EAIR-HFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLE 171
+A++ H + ++ G V +N + L + G+I E +E
Sbjct: 444 KAVKIHRKMVKKGSCGNLVTYN---------MLLGGCLKAGKIKEAME 482
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
K G S ALE++ EME AG ++ L++ AFA FE++ +D +KPD
Sbjct: 100 KLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI--KDGIKPD 157
Query: 67 TETYNCVIQAYTRAESYDR-VQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
YN +I A+ DR V V E+ +R +P +T+ ++ F + + +
Sbjct: 158 VVLYNNIITAFCGMGKMDRAVCTVKEM------QKQRHKPTTRTFMPIIHGFARKGEMKK 211
Query: 126 AIRHF 130
A+ F
Sbjct: 212 ALDVF 216
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK+G +AL + EM A TF +N L+ A G A + M+ + ++P
Sbjct: 309 CKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMK--REGVQP 366
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TY I A ++A R E + + ++PNVKTY L+ + + +
Sbjct: 367 DIHTYTSFINACSKAGDMQRATKTIEEMKSV-----GVKPNVKTYTTLINGWARASLPEK 421
Query: 126 AIRHFRALQ 134
A+ F ++
Sbjct: 422 ALSCFEEMK 430
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G A + EM G ++ ++SC + G F+ M+ ++ ++PD +
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMK--KECIEPDRK 338
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIR 128
YN V+ A +A V + L+ M E+ K ++PNV TY L++ K EA +
Sbjct: 339 VYNAVVHALAKASF---VSEARNLMKTM-EEEKGIEPNVVTYNSLIKPLCKARKTEEAKQ 394
Query: 129 HF 130
F
Sbjct: 395 VF 396
>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
Length = 341
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 551 QKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYV 610
+K + + VE A ++ ++++ G TPT V+I A +R + K+L H G
Sbjct: 121 RKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCA 180
Query: 611 FGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPD 648
F Y+ +I+ G +D A+ + +M T G +PD
Sbjct: 181 FDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRG-CIPD 217
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKAG+ S AL + E+E + F ++ L+ + CG+ + A E + P
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILI--KGLCGVDRMEEADGLLQEMKKKGFLP 401
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ TYN +I Y + + ++ +V M E K ++PN+ T++ L++ + K
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCS---QMTE--KGIEPNIITFSTLIDGYCK 450
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
MI CK G A I +EM G T+ +N L+ G+ AF T+ M
Sbjct: 390 MINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTML--R 447
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+ T TYN +++ + S D D L +M++ K + PN + + L++ F K
Sbjct: 448 NGFAATTLTYNALLKGFCSLGSID---DALRLWFLMLK--KGIAPNEISCSTLLDGFFK 501
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 23/198 (11%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYGEDYMK 64
CK G +A + +++ G +A F ++ L+ + G +VAF + M G +
Sbjct: 736 CKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVG---LT 792
Query: 65 PDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVT 124
P+ TYN +I ++ R + + L K + PN TY L++ K +T
Sbjct: 793 PNIVTYNSLIYGLCKSGELSRAVSLFKKLWT-----KGISPNAITYNTLIDKHCKDGYIT 847
Query: 125 EAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVP 184
EA + + EG + S+ + LC +G + E ++ L+ M ++N V
Sbjct: 848 EAFK-LKQRMIEEGIHPTVFT-------YSILINGLCTQGYMEEAIKLLDQMIENN--VD 897
Query: 185 PRAMILSRKYRTLVSSWI 202
P + Y TL+ ++
Sbjct: 898 PNYV----TYWTLIQGYV 911
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 23/178 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLS--CQATCGIPEVAFATFENMEY 58
+IA CKAG +A+++ EME G AT +N L+ C+ G+ A F +E
Sbjct: 235 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV-YTAVDLFNKLEG 293
Query: 59 GEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFT 118
+ P TYN +IQ ++ +R D LL M + +P+V TY L+
Sbjct: 294 AG--LTPTIVTYNSLIQGFS-----ERANDGLRLLCHM--HAEGCKPDVITYNCLISGLC 344
Query: 119 KYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
V +A R F G N F + +R LC + ++ E L+ M
Sbjct: 345 SANRVEDAQRLFN-------GMACAPNVTTF----NFLIRGLCAQKKVEEARNILDRM 391
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK G+ NA + +EM G T+ F L+S C +A A E E
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALIS--GLCHANRMAEANKLFGEMVE 523
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ P+ TYN +I+ + + + R ELL MVE K L P+ TY L+
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVR---AFELLDEMVE--KGLVPDTYTYRPLISGLCST 578
Query: 121 CAVTEAIRHFRALQ 134
V+EA LQ
Sbjct: 579 GRVSEAREFMNDLQ 592
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENM-EYG 59
+IA K+ AL++ Y++ + T + LL G E A FE M +YG
Sbjct: 866 IIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG 925
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+P+ YN +I + + V EL MV + R P++K+Y LV C +
Sbjct: 926 ---CRPNNAIYNILINGFGKTGD---VNTACELFKRMVREGIR--PDLKSYTSLVGCLCE 977
Query: 120 YCAVTEAIRHFRALQ 134
V +A+ +F L+
Sbjct: 978 AGRVDDALHYFEKLK 992
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C A A ++ EM+ G + + L+ G E A F+ ME
Sbjct: 228 VIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEME--R 285
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D P+ TY +I AY ++ + +V E MM+ K PN+ TY L++ K
Sbjct: 286 DGCAPNVVTYTALIHAYLKSRKVSKANEVYE---MMLS--KGCTPNIVTYTALIDGLCKA 340
Query: 121 CAVTEAIRHFRALQ 134
+ +A + ++ ++
Sbjct: 341 GKIEKASQIYKIMK 354
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 8 AGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDT 67
+G+ A+++ +M+ +G TT FN L+ G E A E ++ G +KP+
Sbjct: 96 SGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGG--VKPNQ 153
Query: 68 ETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAI 127
TYN +++A+ E+ +++ ++ MV +QP+ TY L + + A
Sbjct: 154 RTYNILVRAWCNKEN---MEEAWNMVYKMVASG--MQPDAVTYNTLARAYAEKGETIRAE 208
Query: 128 RHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
+ N +V NE S+ + C+EG +++
Sbjct: 209 EMILEMLN----RRVTPNE----RTCSIIVNGYCKEGNMVD 241
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C+ G +A + +M G +N L+ A G+ AF+TFE M G+ + KP
Sbjct: 468 CEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVM-VGKGW-KP 525
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAEL-----LGMMVED--HKRLQPNVKTYALLVECFT 118
+ ++Y +++ + S D D+ ++ L +++ED ++L Y+ + C
Sbjct: 526 NEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLC 585
Query: 119 KYCAVTEAIRHFRALQN 135
+ + EA F +QN
Sbjct: 586 RVDRLEEAKHFFMGMQN 602
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
+AGD A +I +M + G ++ LL G E A FE ++ + M+PD
Sbjct: 426 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ--KSKMEPD 483
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN +I+ +A +V+D +L + K ++PNV Y ++ F + EA
Sbjct: 484 IYTYNIMIEGMCKA---GKVEDGWDLFCSL--SLKGVKPNVIIYTTMISGFCRKGLKEEA 538
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREG 164
FR ++ E GT L N G + + +RA R+G
Sbjct: 539 DALFREMK--EDGT--LPNSGTY----NTLIRARLRDG 568
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 15/157 (9%)
Query: 12 SNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYN 71
S A+ + M A G F + +++ G ++A + + ME G+ ++ D Y
Sbjct: 186 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK--IEADVVIYT 243
Query: 72 CVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFR 131
+I A +Y V D L M D+K ++PNV TY L+ C Y ++A R
Sbjct: 244 TIIDALC---NYKNVNDALNLFTEM--DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 298
Query: 132 ALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
+ + V+ S + A +EG+++E
Sbjct: 299 DMIERKINPNVV--------TFSALIDAFVKEGKLVE 327
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQAT-CGIPEVAFATFENMEYG 59
+I + CK A ++ EM + G T+ +N + QA C EV A
Sbjct: 327 IIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYN---AIQAYHCDHCEVNRALRLMFRME 383
Query: 60 EDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
+D PD TYN V++ R +D+V +V E MV+ K+ P+V TY++++ F K
Sbjct: 384 KDICLPDRHTYNMVLKLLIRIGRFDKVTEVWE---NMVD--KKFYPSVSTYSVMIHGFCK 438
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
KA H A+E+ EME G + +N L+S G+ E A A + ME +KPD
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG--IKPD 347
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE 115
TY +I RA D + E M+ K PN+ TY L++
Sbjct: 348 VVTYTTLISGLDRAGKIDAA--IVEYDEMVRNGCK---PNLCTYNALIK 391
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 7 KAGDHSNALEIAYEM-EAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
K G +A+ + EM + G FN LL A CG A TF+ M GE M P
Sbjct: 241 KLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFD-MMIGEG-MAP 298
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTK 119
T+N ++ AY Y + +++G++V+ + +P+V +Y+ L+ F K
Sbjct: 299 TIVTFNTLLGAYASQGMY---TEALQVVGLLVK--AKFEPDVVSYSSLLNAFGK 347
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 9 GDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTE 68
G ++ AL++ + A ++ LL+ G PE A F+ M+ + KP+
Sbjct: 314 GMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMK--QRSRKPNLV 371
Query: 69 TYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTY-ALLVECFTKYC 121
T+N ++ AY A Y+R + ELL M E R++PNV T +L C C
Sbjct: 372 TFNGLMDAYASAGKYERAR---ELLHDMAE--ARIEPNVVTICSLFAACARARC 420
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 32/225 (14%)
Query: 6 CKAGDHSNALEIAYEMEAAG-RMATTFHFNHLLSCQATC--GIPEVAFATFENMEYGEDY 62
CKAG A E+ EM+ G +M H + Q C G + A F++M GE+
Sbjct: 10 CKAGQVDQAFELLDEMKERGVKMDVLLHSTLI---QGLCRKGRIDEALEQFKSM--GEE- 63
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
P+ TYN V+ +A D ++ + + E +P+V +Y+ +++ K
Sbjct: 64 CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 123
Query: 123 VTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQP 182
V +A +F+ ++ V+ S + LC+ R+ E L M +
Sbjct: 124 VDKAYEYFKRMRAVGCAPNVV--------TYSSLIDGLCKVDRVDEAYSLL--MQLKGED 173
Query: 183 VPPRAMILSRKYRTLVSSW---------IEPLQEEAELGYEIDYI 218
+ PRAM Y +V+ + +E L E G+ I+ I
Sbjct: 174 MVPRAMY----YNAVVNGFKRQGKPSECLELLLHMKEKGFGINII 214
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I+ CK G+ +AL++ M + + T +N +L G + A + E
Sbjct: 186 LISGYCKTGEIGSALQLLDRMSVSPDVVT---YNTILRTLCDSGKLKEAMEVLDRQMQRE 242
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
Y PD TY +I+A + V +LL M + K +P+V TY +L+ K
Sbjct: 243 CY--PDVITYTILIEATCKESG---VGQAMKLLDEMRD--KGCKPDVVTYNVLINGICKE 295
Query: 121 CAVTEAIRHFRALQNYEGGTKVL-HNEGNFGDPLSLYLRALCREGR 165
+ EAIR + +Y V+ HN + LR++C GR
Sbjct: 296 GRLDEAIRFLNHMPSYGCQPNVITHN---------IILRSMCSTGR 332
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 83/213 (38%), Gaps = 24/213 (11%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK A+E M + G +N LL+ G +VA + G P
Sbjct: 398 CKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL--GSKGCSP 455
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
TYN VI ++ D D +LL M K L+P++ TY+ LV ++ V E
Sbjct: 456 VLITYNTVIDGLSKVGKTD---DAIKLLDEM--KGKGLKPDIITYSTLVGGLSREGKVDE 510
Query: 126 AIRHFRALQNYEGGTK---VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM-AKDNQ 181
AI F L+ E G K + +N G LC+ + + ++ L M A+ +
Sbjct: 511 AIAFFHDLE--EMGVKPNAITYNSIMLG---------LCKARQTVRAIDFLAYMVARGCK 559
Query: 182 PVPPRAMIL--SRKYRTLVSSWIEPLQEEAELG 212
P MIL Y L +E L E G
Sbjct: 560 PTETSYMILIEGLAYEGLAKEALELLNELCSRG 592
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
+AGD A +I +M + G ++ LL G E A FE ++ + M+PD
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ--KSKMEPD 499
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN +I+ +A +V+D +L + K ++PNV Y ++ F + EA
Sbjct: 500 IYTYNIMIEGMCKA---GKVEDGWDLFCSL--SLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 127 IRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREG 164
FR ++ E GT L N G + + +RA R+G
Sbjct: 555 DALFREMK--EDGT--LPNSGTY----NTLIRARLRDG 584
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 15/157 (9%)
Query: 12 SNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYN 71
S A+ + M A G F + +++ G ++A + + ME G+ ++ D Y
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK--IEADVVIYT 259
Query: 72 CVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFR 131
+I A +Y V D L M D+K ++PNV TY L+ C Y ++A R
Sbjct: 260 TIIDALC---NYKNVNDALNLFTEM--DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 132 ALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIE 168
+ + V+ S + A +EG+++E
Sbjct: 315 DMIERKINPNVV--------TFSALIDAFVKEGKLVE 343
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 23/230 (10%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CKA A EI EME G + +N L+ E A + M + KP
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM--EGQKP 538
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
D TYN ++ + R + D+ + + +P++ TY L+ K V
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAM-----TSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAKDNQPVPP 185
A + R++Q K ++ + +P+ ++ L R+ + E + M + N+ PP
Sbjct: 594 ASKLLRSIQ-----MKGINLTPHAYNPV---IQGLFRKRKTTEAINLFREMLEQNE-APP 644
Query: 186 RAMILSRKYRTLVSSW------IEPLQEEAELGYEIDYIARY-ISEGGLT 228
A+ +R L + ++ L E E G+ ++ + Y ++EG LT
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLT 694
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 551 QKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGYV 610
+K + + VE A ++ ++++ G TPT V+I A +R + K+L H G
Sbjct: 1814 RKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCA 1873
Query: 611 FGSPLYDEIISLCLDLGELDAAVAIVADMETTGIAVPD 648
F Y+ +I+ G +D A+ + +M T G +PD
Sbjct: 1874 FDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRG-CIPD 1910
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I CKAG+ A+ + +M G F L+ G + A M+ +
Sbjct: 336 LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK--Q 393
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+KP YN +I Y R+ + ELL M + K L+P+V TY+ ++ + K
Sbjct: 394 CRIKPSVVCYNALINGYCMV---GRMDEARELLHEM--EAKGLKPDVVTYSTIISAYCKN 448
Query: 121 C 121
C
Sbjct: 449 C 449
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 14 ALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCV 73
A E+ ++ G +T +N +++ G + A+ F+ M D +PD TYN +
Sbjct: 164 AHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMP--ADGCRPDCFTYNTL 221
Query: 74 IQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAI 127
+ R D + + + + ++PNV TY +LV+ F V EA+
Sbjct: 222 VHGVCRRGIVDEALRLVKQM-----ERAGIRPNVVTYTMLVDGFCNASRVEEAV 270
>gi|384253709|gb|EIE27183.1| hypothetical protein COCSUDRAFT_38919 [Coccomyxa subellipsoidea
C-169]
Length = 675
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Query: 550 PQKWSQEWEVELAIQIMLKVIELGGTPTIGDCAVIIRAAIRAPLPSAFLKILQKTHSLGY 609
PQ + +VE A+ + ++ G TPT+ +C ++ A I L I + LG
Sbjct: 327 PQPFGMARQVESALGLWRQMAASGTTPTVDNCNALLTACIDCDQGERALDIYRSMKDLGV 386
Query: 610 VFGSPLYDEIISLC-------LDLGELDAAVAIVADMETTGIAVPDQTLDRVIT 656
Y+ + C L +LD A ++ADM G+A QT+ ++
Sbjct: 387 EPDLVTYNLAVRACGGQSGSKLRSAQLDQAFQLLADMRAAGVAPDQQTVTSMLA 440
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK AL + +M+ +T+ FN+L+S G PE+ + M+ + + P
Sbjct: 194 CKEKMEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMK--KRSISP 251
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAE 91
DT TYN ++Q+Y R + + V E
Sbjct: 252 DTFTYNILMQSYARLNDIEGAERVLE 277
>gi|307203568|gb|EFN82601.1| Nuclear protein Hcc-1 [Harpegnathos saltator]
Length = 249
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 12/114 (10%)
Query: 320 SKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSRGRPLWVPPVEEE---EEEV- 375
SKM V++L+ EL +GLP+ G +N L +R+Q A + + L + EE E+EV
Sbjct: 14 SKMKVADLRAELKQRGLPSTGNKNELVERLQLAMHGDST----LSLDETAEEILDEDEVL 69
Query: 376 -DEEVDELISRIKLEEGNTEFWKRRFLGEGLNGRHDKAVEMDESELSDVLDDDV 428
DEE++EL S+ +E KR+ + NG K V +S L ++ +D V
Sbjct: 70 GDEEIEELSSKPDSQELP---EKRKLSTDSNNGNAKKIVLNRKSVLEEIKNDQV 120
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 27/191 (14%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
C A + A + EM G + F+ L+ G + A F+ M + Y++P
Sbjct: 299 CSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMV--QRYVEP 356
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
T TYN +I+ Y A D + + L M+ +KR Q + +Y++L++ + K V
Sbjct: 357 STRTYNILIEGYCLAGMVDEGKKI--FLSMV---NKRCQHDAGSYSILMKAYCKDSEVHG 411
Query: 126 AIRHFRALQN---------YE--GGTKVLHNEGNFGDPL---------SLYLRALCREGR 165
A+ +R + + Y G + L E F D + ++YL LC+ G
Sbjct: 412 AMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGC 471
Query: 166 IIELLEALEAM 176
+ E L+ +
Sbjct: 472 VSEALDVFYGL 482
>gi|146182801|ref|XP_001025271.2| hypothetical protein TTHERM_00837970 [Tetrahymena thermophila]
gi|146143712|gb|EAS05026.2| hypothetical protein TTHERM_00837970 [Tetrahymena thermophila
SB210]
Length = 1080
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
+KP+T Y +++ YT+ E+ + ++ E++ + K L+PN+ +Y L+EC + C
Sbjct: 486 IKPNTIIYTTLLKGYTKQENMKKALEIFEIM----KKDKDLEPNIVSYNSLMECAVQ-CK 540
Query: 123 VTEAIRH-FRALQNYEGGTKVLHNEGNFGDPL--SLYLRALCREGRIIELLEALEAMAKD 179
E ++ F + + E D + S Y++ L ++G I E LE E + K
Sbjct: 541 DKEQMKKIFNEIMEQKE-------ENKRADLITYSTYIKGLFKQGDIEEALEIFEDLRKQ 593
Query: 180 NQ 181
Q
Sbjct: 594 EQ 595
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 39/258 (15%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C+ G S+A + EA+G F +N L++ G + A +M
Sbjct: 80 LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP--- 136
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
+ PD TY +I+ RV D LL M++ + QP+V TY +L+E K
Sbjct: 137 --VPPDAYTYTPIIRGLC---DRGRVGDALALLDDMLQ--RGCQPSVVTYTVLLEAVCKS 189
Query: 121 CAVTEAIRHFRALQNYEGGTK--VLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
EA+ ++ +G T V +N + + +CREGR+ + E L ++
Sbjct: 190 SGFGEAMNVLDEMRA-KGCTPNIVTYN---------VIINGMCREGRVDDAKEILNRLSS 239
Query: 179 DN-QP------VPPRAMILSRKY---RTLVSSWIEPLQEEAELGYEIDYIARYISEGGLT 228
QP + + +R++ + L + ++ E+ + D + R+ GG+
Sbjct: 240 YGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF--DMLVRFFCRGGMV 297
Query: 229 GERKRWV----PRRGKTP 242
ER V + G TP
Sbjct: 298 -ERAIQVLQQMSQHGCTP 314
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 14/169 (8%)
Query: 6 CKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKP 65
CK G A E+ EM G + L+ G E AF F + + Y KP
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY-KP 356
Query: 66 DTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTE 125
+ TY +I Y + + +R AE+L +++ L PNV TY L+ +C
Sbjct: 357 NVHTYTSMIGGYCKEDKLNR----AEMLFSRMKEQG-LFPNVNTYTTLIN---GHCKAGS 408
Query: 126 AIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALE 174
R + L N G + N + + +LC++ R E E L
Sbjct: 409 FGRAYE-LMNLMGDEGFMPNIYTYNAAID----SLCKKSRAPEAYELLN 452
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 17/159 (10%)
Query: 21 MEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPDTETYNCVIQAYTRA 80
ME G AT + L+ +T G A + M+ + D Y VI AY RA
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMK--AKNVAGDVYLYTAVINAYCRA 250
Query: 81 ESYDRVQDVA-ELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEAIRHFRALQNYEGG 139
+ R +V E +G +E PN +TY +L+ F K + A +Q G
Sbjct: 251 GNVRRASEVFDECVGNGIE------PNERTYGVLINGFCKIGQMEAAEMLLADMQ----G 300
Query: 140 TKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAMAK 178
V HN+ F + Y CR+G + L+ AM K
Sbjct: 301 RGVGHNQIIFNTMIDGY----CRQGMVDNALKVKAAMEK 335
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 40/215 (18%)
Query: 54 ENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALL 113
E + +++ KPD TYN +I +++ +D D +L MV+ K+++P T+ L
Sbjct: 139 ERLSSIDEFGKPDACTYNILIHGCSQSGCFD---DALKLFDEMVK--KKVKPTGVTFGTL 193
Query: 114 VECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELL--- 170
+ K V EA++ + G +H + ++ALC+ G +
Sbjct: 194 IHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASL-------IKALCQIGELSFAFKLK 246
Query: 171 -EALEAMAKDNQPVPPRAMILSRKYRTLVSSWIEP---------LQEEAELGYEIDYIAR 220
EA E K + + Y TL+SS I+ L+E +E G + D +
Sbjct: 247 DEAYEGKIKVDAAI----------YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTY 296
Query: 221 YISEGGLTGER-----KRWVPRRGKTPLDPDAVGF 250
+ G E R + + L PD + +
Sbjct: 297 NVLINGFCVENDSESANRVLDEMVEKGLKPDVISY 331
>gi|328780739|ref|XP_623549.2| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 1
[Apis mellifera]
gi|380028407|ref|XP_003697894.1| PREDICTED: LOW QUALITY PROTEIN: SAP domain-containing
ribonucleoprotein-like [Apis florea]
Length = 248
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 15/81 (18%)
Query: 320 SKMVVSELKEELDAQGLPTDGTRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEEV---- 375
SKM V++LK EL +GLPT G +N L +R+Q A I+ L +E EE+
Sbjct: 14 SKMKVADLKIELKHRGLPTTGNKNELVERLQLA--IHGDSALSL-----DETTEEILDED 66
Query: 376 ----DEEVDELISRIKLEEGN 392
DEE++EL S+ +EGN
Sbjct: 67 AVLGDEEIEELSSKPDSQEGN 87
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 17/174 (9%)
Query: 6 CKAGDHSNALEIAYEMEAAG-RMATTFHFNHLLSCQATC--GIPEVAFATFENMEYGEDY 62
CKAG A E+ EM+ G +M H + Q C G + A F++M GE+
Sbjct: 122 CKAGQVDQAFELLDEMKERGVKMDVLLHSTLI---QGLCRKGRIDEALEQFKSM--GEE- 175
Query: 63 MKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCA 122
P+ TYN V+ +A D ++ + + E +P+V +Y+ +++ K
Sbjct: 176 CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 235
Query: 123 VTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEALEAM 176
V +A +F+ ++ V+ S + LC+ R E LE L M
Sbjct: 236 VDKAYEYFKRMRAVGCAPNVV--------TYSSLIDGLCKVDRPSECLELLLHM 281
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C A A ++ EM+ G + + LL G+ E A F+ M+ +
Sbjct: 128 VIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQ--Q 185
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKY 120
D P+ TY +I AY + R ++ E MM+ + PN+ TY L++ K
Sbjct: 186 DGCAPNVVTYTALIHAYLKTRKLSRANEIFE---MMLSNG--CVPNIVTYTALIDGHCKA 240
Query: 121 CAVTEAIRHFRALQN 135
+A + + ++N
Sbjct: 241 GETEKACQIYARMKN 255
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 19/187 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C A NA + EM++ + F + L+ G+ + A F+ M
Sbjct: 486 VIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV--R 543
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE--C-- 116
D P+ TY +I AY +A ++ EL MM+ + PNV TY L++ C
Sbjct: 544 DGCAPNVVTYTALIHAYLKAR---KMSSANELFEMMLSEG--CIPNVVTYTALIDGHCKS 598
Query: 117 --FTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDP----LSLYLRALCREGRIIELL 170
K C + +R + + + K+ ++GN DP + LC+ ++ E
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKI--DDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656
Query: 171 EALEAMA 177
+ L+ M+
Sbjct: 657 DLLDVMS 663
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 19/187 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C A NA + EM++ + F + L+ G+ + A F+ M
Sbjct: 486 VIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV--R 543
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE--C-- 116
D P+ TY +I AY +A ++ EL MM+ + PNV TY L++ C
Sbjct: 544 DGCAPNVVTYTALIHAYLKAR---KMSSANELFEMMLSEG--CIPNVVTYTALIDGHCKS 598
Query: 117 --FTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDP----LSLYLRALCREGRIIELL 170
K C + +R + + + K+ ++GN DP + LC+ ++ E
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKI--DDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656
Query: 171 EALEAMA 177
+ L+ M+
Sbjct: 657 DLLDVMS 663
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 7 KAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGEDYMKPD 66
+ G A E+ ++ G +T +N +++ G + A+ F+ M D +PD
Sbjct: 157 RLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMP--ADGCRPD 214
Query: 67 TETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECFTKYCAVTEA 126
TYN ++ R D + + + + ++PNV TY +LV+ F V EA
Sbjct: 215 CFTYNTLVHGVCRRGIVDEALRLVKQM-----ERAGIRPNVVTYTMLVDGFCNASRVEEA 269
Query: 127 I 127
+
Sbjct: 270 V 270
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 19/187 (10%)
Query: 1 MIAEDCKAGDHSNALEIAYEMEAAGRMATTFHFNHLLSCQATCGIPEVAFATFENMEYGE 60
+I C A NA + EM++ + F + L+ G+ + A F+ M
Sbjct: 486 VIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV--R 543
Query: 61 DYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVE--C-- 116
D P+ TY +I AY +A ++ EL MM+ + PNV TY L++ C
Sbjct: 544 DGCAPNVVTYTALIHAYLKAR---KMSSANELFEMMLSEG--CIPNVVTYTALIDGHCKS 598
Query: 117 --FTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDP----LSLYLRALCREGRIIELL 170
K C + +R + + + K+ ++GN DP + LC+ ++ E
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKI--DDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656
Query: 171 EALEAMA 177
+ L+ M+
Sbjct: 657 DLLDVMS 663
>gi|297847728|ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337587|gb|EFH68004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 54 ENMEYGEDYMKPDTETYNCVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALL 113
E + +++ KPD TYN +I ++ +D D +L MV+ K+++P T+ L
Sbjct: 139 ERLSSIDEFGKPDACTYNILIHGCSQRGCFD---DALKLFDEMVK--KKVKPTGVTFGTL 193
Query: 114 VECFTKYCAVTEAIRHFRALQNYEGGTKVLHNEGNFGDPLSLYLRALCREGRIIELLEAL 173
+ K V EA++ + + G +H + ++ALC+ G E
Sbjct: 194 IHGLCKNLRVKEALKMKQDMLKVYGVRPTVHIYASL-------VKALCQIG------ELS 240
Query: 174 EAMAKDNQPVPPRAMILSRKYRTLVSSWIEP---------LQEEAELGYEIDYIARYISE 224
A ++ + + S Y TL+SS I+ L+E +E G + D + +
Sbjct: 241 FAFKLKDEAYEGKIKVDSAIYSTLISSLIKAGRSNEVSRILEEMSEKGCKPDTVTYNVLI 300
Query: 225 GGLTGE 230
G E
Sbjct: 301 NGFCVE 306
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,785,476,128
Number of Sequences: 23463169
Number of extensions: 473393634
Number of successful extensions: 2454861
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 7020
Number of HSP's that attempted gapping in prelim test: 2346078
Number of HSP's gapped (non-prelim): 57091
length of query: 670
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 520
effective length of database: 8,839,720,017
effective search space: 4596654408840
effective search space used: 4596654408840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)