Query 005915
Match_columns 670
No_of_seqs 436 out of 2485
Neff 7.6
Searched_HMMs 46136
Date Thu Mar 28 15:38:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005915.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005915hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2413 Xaa-Pro aminopeptidase 100.0 6E-102 1E-106 830.4 37.7 548 83-666 10-561 (606)
2 PRK09795 aminopeptidase; Provi 100.0 1.4E-62 3E-67 531.7 37.7 346 254-663 2-357 (361)
3 COG0006 PepP Xaa-Pro aminopept 100.0 1.4E-60 3E-65 520.4 37.4 366 245-664 3-383 (384)
4 TIGR02993 ectoine_eutD ectoine 100.0 1.1E-60 2.4E-65 521.0 36.4 362 245-663 4-389 (391)
5 PRK14575 putative peptidase; P 100.0 1E-57 2.2E-62 499.4 36.7 357 255-663 12-404 (406)
6 PRK14576 putative endopeptidas 100.0 2.2E-56 4.7E-61 488.8 37.1 356 255-662 12-402 (405)
7 PRK10879 proline aminopeptidas 100.0 2.6E-51 5.6E-56 452.1 37.8 364 248-668 2-432 (438)
8 PRK15173 peptidase; Provisiona 100.0 1.6E-50 3.5E-55 429.5 29.8 275 338-663 45-321 (323)
9 PRK13607 proline dipeptidase; 100.0 2.4E-45 5.3E-50 403.7 30.4 233 398-656 147-438 (443)
10 PRK12897 methionine aminopepti 100.0 8.4E-45 1.8E-49 372.9 26.5 222 411-657 3-248 (248)
11 PRK07281 methionine aminopepti 100.0 2.3E-44 5E-49 374.0 26.6 227 410-661 2-284 (286)
12 PRK12318 methionine aminopepti 100.0 8.4E-44 1.8E-48 372.0 27.8 231 404-659 34-291 (291)
13 KOG2414 Putative Xaa-Pro amino 100.0 7.7E-43 1.7E-47 357.7 27.4 377 232-668 43-484 (488)
14 TIGR00500 met_pdase_I methioni 100.0 6.5E-43 1.4E-47 359.0 27.0 221 411-656 2-246 (247)
15 PRK05716 methionine aminopepti 100.0 7.7E-43 1.7E-47 359.5 27.1 227 409-660 2-252 (252)
16 cd01085 APP X-Prolyl Aminopept 100.0 3.3E-42 7.1E-47 347.3 26.4 216 421-640 2-220 (224)
17 cd01090 Creatinase Creatine am 100.0 6.3E-42 1.4E-46 346.8 25.6 214 418-656 1-228 (228)
18 PRK12896 methionine aminopepti 100.0 9.3E-42 2E-46 352.1 26.8 224 408-656 6-254 (255)
19 PLN03158 methionine aminopepti 100.0 2.4E-41 5.2E-46 364.2 27.4 233 405-662 130-387 (396)
20 cd01087 Prolidase Prolidase. E 100.0 2E-41 4.4E-46 347.1 24.8 212 418-656 1-243 (243)
21 KOG2737 Putative metallopeptid 100.0 2.6E-41 5.6E-46 342.8 22.4 242 404-669 177-479 (492)
22 cd01092 APP-like Similar to Pr 100.0 4.3E-39 9.3E-44 321.7 25.5 205 418-638 1-207 (208)
23 cd01086 MetAP1 Methionine Amin 100.0 5.8E-39 1.2E-43 327.9 25.7 214 418-656 1-238 (238)
24 cd01091 CDC68-like Related to 100.0 5E-39 1.1E-43 327.7 23.9 215 418-656 1-243 (243)
25 PF00557 Peptidase_M24: Metall 100.0 1.9E-37 4.1E-42 309.8 22.1 203 419-636 1-207 (207)
26 cd01066 APP_MetAP A family inc 100.0 2.5E-35 5.4E-40 292.7 25.0 204 418-638 1-206 (207)
27 cd01089 PA2G4-like Related to 100.0 4.9E-35 1.1E-39 296.8 22.8 208 418-656 1-228 (228)
28 COG0024 Map Methionine aminope 100.0 9.9E-32 2.1E-36 270.1 26.1 222 412-658 5-253 (255)
29 PRK08671 methionine aminopepti 100.0 5.6E-30 1.2E-34 268.4 25.9 193 417-626 1-195 (291)
30 PTZ00053 methionine aminopepti 100.0 7.6E-30 1.7E-34 277.0 23.8 196 410-619 150-360 (470)
31 TIGR00495 crvDNA_42K 42K curve 100.0 2.3E-29 4.9E-34 272.1 27.0 199 410-619 11-232 (389)
32 KOG2738 Putative methionine am 100.0 1E-29 2.3E-34 251.4 20.7 224 410-657 114-360 (369)
33 TIGR00501 met_pdase_II methion 100.0 3.8E-29 8.1E-34 262.3 22.7 200 415-630 2-202 (295)
34 cd01088 MetAP2 Methionine Amin 100.0 2.1E-28 4.6E-33 256.5 22.2 195 418-628 1-196 (291)
35 KOG1189 Global transcriptional 99.9 8.4E-25 1.8E-29 238.4 25.4 328 279-660 20-381 (960)
36 COG5406 Nucleosome binding fac 99.8 8E-19 1.7E-23 188.2 19.3 231 397-637 155-410 (1001)
37 PRK09795 aminopeptidase; Provi 99.7 5.9E-15 1.3E-19 160.1 27.9 122 83-228 2-125 (361)
38 PF01321 Creatinase_N: Creatin 99.6 2.6E-15 5.7E-20 138.3 8.7 125 84-228 1-130 (132)
39 PF01321 Creatinase_N: Creatin 99.5 2E-14 4.3E-19 132.5 7.0 128 255-412 1-132 (132)
40 TIGR02993 ectoine_eutD ectoine 99.3 2.1E-11 4.5E-16 133.7 16.1 133 79-229 9-157 (391)
41 KOG2775 Metallopeptidase [Gene 99.3 2.9E-11 6.4E-16 120.9 15.5 237 417-668 84-343 (397)
42 KOG2776 Metallopeptidase [Gene 99.2 9.1E-10 2E-14 113.3 17.2 155 410-573 13-182 (398)
43 PRK14575 putative peptidase; P 99.2 7.8E-09 1.7E-13 113.9 26.1 129 83-229 11-177 (406)
44 COG0006 PepP Xaa-Pro aminopept 98.9 3E-07 6.6E-12 100.8 26.7 131 80-229 9-153 (384)
45 PRK14576 putative endopeptidas 98.9 2.3E-08 5E-13 110.2 16.9 126 85-228 13-175 (405)
46 KOG2413 Xaa-Pro aminopeptidase 98.1 8E-06 1.7E-10 90.1 7.7 108 254-370 10-132 (606)
47 PLN03158 methionine aminopepti 96.9 0.0055 1.2E-07 67.1 10.5 112 515-636 127-247 (396)
48 cd01086 MetAP1 Methionine Amin 96.5 0.023 4.9E-07 57.9 11.2 98 530-636 2-105 (238)
49 COG0024 Map Methionine aminope 95.7 0.051 1.1E-06 55.7 9.2 99 531-635 13-115 (255)
50 cd01088 MetAP2 Methionine Amin 95.7 0.097 2.1E-06 55.2 11.6 97 530-634 2-98 (291)
51 PF05195 AMP_N: Aminopeptidase 95.4 0.077 1.7E-06 49.2 8.3 98 248-355 2-127 (134)
52 PRK05716 methionine aminopepti 95.3 0.15 3.3E-06 52.3 11.2 96 531-635 13-114 (252)
53 PRK12896 methionine aminopepti 94.7 0.19 4.2E-06 51.6 10.2 108 520-636 5-120 (255)
54 KOG2738 Putative methionine am 94.4 0.16 3.5E-06 52.2 8.3 96 531-637 124-227 (369)
55 TIGR00495 crvDNA_42K 42K curve 91.6 1.7 3.8E-05 47.7 11.8 102 532-636 22-130 (389)
56 PRK08671 methionine aminopepti 91.2 2.5 5.3E-05 44.6 12.1 96 530-635 3-100 (291)
57 TIGR00501 met_pdase_II methion 90.9 2.5 5.3E-05 44.7 11.7 95 531-635 7-103 (295)
58 PF14826 FACT-Spt16_Nlob: FACT 90.8 0.4 8.7E-06 46.0 5.1 136 82-218 7-159 (163)
59 cd01092 APP-like Similar to Pr 89.9 2.7 5.8E-05 41.4 10.5 97 531-636 3-100 (208)
60 cd01087 Prolidase Prolidase. E 89.4 1.9 4.2E-05 43.9 9.3 94 531-634 3-97 (243)
61 PF00557 Peptidase_M24: Metall 88.6 2.3 5.1E-05 41.9 9.0 95 531-635 2-99 (207)
62 PRK12897 methionine aminopepti 87.7 5.5 0.00012 40.8 11.3 95 532-635 13-113 (248)
63 PTZ00053 methionine aminopepti 87.7 5.5 0.00012 44.6 11.9 90 533-635 162-262 (470)
64 TIGR00500 met_pdase_I methioni 85.9 6.9 0.00015 39.9 10.9 96 532-636 12-113 (247)
65 cd01066 APP_MetAP A family inc 85.9 5.8 0.00013 38.5 10.0 97 531-636 3-99 (207)
66 cd01090 Creatinase Creatine am 85.6 7.8 0.00017 39.2 10.9 96 531-635 3-105 (228)
67 PRK07281 methionine aminopepti 85.2 6.8 0.00015 41.2 10.6 81 532-618 13-101 (286)
68 cd01089 PA2G4-like Related to 85.0 11 0.00023 38.2 11.6 100 531-636 3-112 (228)
69 PRK12318 methionine aminopepti 85.0 9.2 0.0002 40.3 11.5 95 533-635 53-154 (291)
70 PRK15173 peptidase; Provisiona 77.1 4.2 9E-05 43.6 5.6 54 172-229 37-94 (323)
71 cd01091 CDC68-like Related to 76.4 19 0.00041 36.9 10.0 97 421-527 121-234 (243)
72 PF05195 AMP_N: Aminopeptidase 75.6 2 4.4E-05 39.7 2.4 64 82-149 7-77 (134)
73 PF14826 FACT-Spt16_Nlob: FACT 74.6 6.6 0.00014 37.7 5.7 57 249-313 3-77 (163)
74 cd01085 APP X-Prolyl Aminopept 73.5 17 0.00038 36.6 8.8 97 531-635 5-107 (224)
75 PRK10879 proline aminopeptidas 70.6 38 0.00083 37.9 11.4 93 533-634 183-276 (438)
76 KOG2775 Metallopeptidase [Gene 69.9 23 0.00049 37.0 8.4 82 533-622 89-177 (397)
77 PF00486 Trans_reg_C: Transcri 57.9 17 0.00038 29.3 4.4 58 196-269 6-63 (77)
78 KOG2776 Metallopeptidase [Gene 52.0 92 0.002 33.5 9.3 95 532-637 24-133 (398)
79 cd00383 trans_reg_C Effector d 37.4 58 0.0013 27.3 4.6 58 196-269 24-81 (95)
80 smart00862 Trans_reg_C Transcr 36.0 66 0.0014 25.8 4.5 58 196-268 6-63 (78)
81 KOG2414 Putative Xaa-Pro amino 35.7 79 0.0017 34.6 5.9 68 79-150 65-141 (488)
82 KOG1189 Global transcriptional 32.2 2.4E+02 0.0051 33.5 9.3 105 123-229 21-136 (960)
83 TIGR00035 asp_race aspartate r 30.5 4.7E+02 0.01 26.2 10.6 25 80-106 59-83 (229)
84 COG2861 Uncharacterized protei 27.4 1.7E+02 0.0037 29.9 6.4 124 68-218 92-240 (250)
85 PRK00865 glutamate racemase; P 27.1 1.4E+02 0.0031 30.8 6.2 70 187-276 6-76 (261)
86 COG0194 Gmk Guanylate kinase [ 26.8 6.2E+02 0.013 25.0 10.0 120 139-276 47-168 (191)
87 TIGR03241 arg_catab_astB succi 26.0 2.1E+02 0.0045 31.4 7.1 52 403-456 365-416 (443)
88 PF07385 DUF1498: Protein of u 25.5 66 0.0014 32.3 3.1 44 600-643 152-198 (225)
89 COG1139 Uncharacterized conser 23.9 4E+02 0.0087 29.7 8.9 67 172-243 87-157 (459)
90 PRK13607 proline dipeptidase; 22.2 3.4E+02 0.0073 30.5 8.4 93 532-633 170-263 (443)
91 PF14503 YhfZ_C: YhfZ C-termin 21.8 2.9E+02 0.0064 28.1 7.0 33 184-218 112-144 (232)
92 PF02602 HEM4: Uroporphyrinoge 20.1 28 0.00061 34.7 -0.6 32 255-286 156-187 (231)
93 COG0159 TrpA Tryptophan syntha 20.1 3.1E+02 0.0068 28.5 6.9 112 152-276 9-131 (265)
No 1
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-102 Score=830.38 Aligned_cols=548 Identities=55% Similarity=0.907 Sum_probs=509.8
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCceEEEEeCCCcEEEEccccHHHHHhhccCce
Q 005915 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLSSSW 162 (670)
Q Consensus 83 ~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g~lvv~~~~~~L~td~ry~~qa~~~~~~~~ 162 (670)
.++.++|+.|+. .+++||||++.|+|||||++.++++++|||||+||+|++|||.++|.||||+||+.||.+|++.+|
T Consensus 10 ~~~~~~~~~~~~--~~i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsag~Avit~~~a~lwtD~RY~~QA~~qld~~W 87 (606)
T KOG2413|consen 10 FELMRLRELMKS--PPIDAYILPSTDAHQSEYIADRDERRAFLSGFSGSAGTAVITEEEAALWTDGRYFQQAEQQLDSNW 87 (606)
T ss_pred HHHHHHHHHhcC--CCceEEEccCCchhhhhhhcchhhhhhhhcccCCCcceEEEecCcceEEEccHHHHHHHhhhcccc
Confidence 478999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCccccc
Q 005915 163 ILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRV 242 (670)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~ 242 (670)
++++.+.+ ++++.+||.+.++.+++||||+..+|+..++++.+.|..+++++|++ .+|+||.+|+ +||++|.++++.
T Consensus 88 ~l~k~~~~-~~~v~~wl~~~l~~~~~vG~Dp~Lis~~~~~~~~~~l~s~~~~Lv~i-~~nLVD~iW~-~rP~~~~~~v~~ 164 (606)
T KOG2413|consen 88 TLMKMGED-VPTVEEWLAKVLPEGSRVGIDPTLISFDAWKQLEKSLTSKGLELVPI-PGNLVDEIWG-DRPERPGNPVIV 164 (606)
T ss_pred eeeeccCC-CccHHHHHHHhCCCccccccCcceechhHHHhHHHHHhhCCCeEeec-cccchhhhhc-cCCccCCCceEE
Confidence 99999865 89999999999999999999999999999999999999999999999 7999999997 999999999999
Q ss_pred ccccccchhHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCCceEEEEeCCCCCHHHHh
Q 005915 243 HALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMD 322 (670)
Q Consensus 243 ~~~~~s~~e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~~ 322 (670)
++..|+|.....|+..||+.|++.+.+++|+++.++|+||.|+||+|+||+|++++|++|+.++..||+|+.++..+...
T Consensus 165 l~~~~~G~~~~~Kv~~LR~~l~~~~~~a~Vvs~LdeIaWllNLRGsDipynPv~~sY~~it~dei~lfvd~~k~~~~~~~ 244 (606)
T KOG2413|consen 165 LDLEFAGLSVDDKVDNLRKKLKEKKCDAFVVTALDEIAWLLNLRGSDIPYNPVFYSYAIITMDEIFLFVDNSKLSDESKK 244 (606)
T ss_pred eeccccCcchhHHHHHHHHHHhhcCCcEEehhhHHHHHHHHhcccCcCCCCchhhhhhhhhhhhhheeecCcccCchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred hhhcCCeEEEecccHHHHHHHHHhc--CCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcce
Q 005915 323 HLKNAGVELRPYNSILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGV 400 (670)
Q Consensus 323 ~l~~~~v~i~~y~~~~~~l~~l~~~--~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 400 (670)
++...+|++.+|.++...++.+... ..+|++.. ..++.+...+. ....+
T Consensus 245 ~~~~~~v~i~pY~~i~~~i~~~~~~~~~~~i~ia~-~~~~~i~~~i~----------------------------~~~~~ 295 (606)
T KOG2413|consen 245 HLREDGVEIRPYDQIWSDIKNWASAFADKKIWISP-ETNYGIGELIG----------------------------EDHSM 295 (606)
T ss_pred HHhhCceeeeeHHHHHHHHHHHhcccCceeEeecc-cceeeeccccc----------------------------ccccc
Confidence 8888889999999999998888643 34555554 33333222221 12235
Q ss_pred ecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEee-
Q 005915 401 FRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGS- 479 (670)
Q Consensus 401 d~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~s- 479 (670)
...++|..++++|++.|++.||.|+..+++|+.+++.|++..+.++.-+||.+++.++++++.++.++.++||+||+++
T Consensus 296 ~~~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmglSFeTIS~s~ 375 (606)
T KOG2413|consen 296 IDPSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMGLSFETISSSV 375 (606)
T ss_pred cccCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccCcCcceeeccC
Confidence 5578899999999999999999999999999999999999998544449999999999999999999999999999977
Q ss_pred CCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhH
Q 005915 480 GANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFV 559 (670)
Q Consensus 480 G~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~e 559 (670)
|+|+|++||.|...+++++.+..++++|+|++|..+++|+|||+++|+|++++++.|+.|++++.++.++++|.|+.+..
T Consensus 376 G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~ 455 (606)
T KOG2413|consen 376 GPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSV 455 (606)
T ss_pred CCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcch
Confidence 99999999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccCcccccccCCccccCCCcccccC-CCCccccCCCEEEECceeeecCcceEEEEEEEEEecCC
Q 005915 560 LDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRY-GNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVG 638 (670)
Q Consensus 560 v~~~a~~~l~~~G~~~~h~~GHgiG~~l~~hE~P~~i~~~~-~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~g 638 (670)
+|..+|..+|+.|++|.|++|||||+||++||+|..+++++ .+...|++||++++|||+|.+|.||+||||.++|.+.+
T Consensus 456 lD~laR~~LW~~gLDy~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~dg~fGIRienv~~vvd~~ 535 (606)
T KOG2413|consen 456 LDALARSALWKAGLDYGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYKDGEFGIRIENVVEVVDAG 535 (606)
T ss_pred hHHHHHHHHHhhccccCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccccCcceEEEeeEEEEEecc
Confidence 99999999999999999999999999999999999888874 46788999999999999999999999999999999998
Q ss_pred CCCCCCCccccceeEccCCCcchhHhhh
Q 005915 639 TPNRFGGVSYLGFEKLTFVPIQVCHENR 666 (670)
Q Consensus 639 ~~~~~~~~~~lG~E~LT~~P~~~~~i~~ 666 (670)
.+++| ..||+||+||.+|+++.+|+.
T Consensus 536 ~~~~~--~~~L~fe~lT~vP~q~klid~ 561 (606)
T KOG2413|consen 536 TKHNF--RGFLTFEPLTLVPYQTKLIDK 561 (606)
T ss_pred ccccc--cceeeeccceecceecccCCh
Confidence 88888 789999999999999888763
No 2
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=1.4e-62 Score=531.68 Aligned_cols=346 Identities=26% Similarity=0.341 Sum_probs=298.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCCceEEEEeCCCCCHHHHhhhhcCCeEEEe
Q 005915 254 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVELRP 333 (670)
Q Consensus 254 ~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~~~l~~~~v~i~~ 333 (670)
+|+++|++.|+++++|++||++++|++|||||+|+. ++++|++++++||+|. ++.++++.......+.+..
T Consensus 2 ~Rl~~l~~~m~~~~lDa~lI~~~~n~~YLTGf~g~~--------g~llIt~~~~~l~td~-ry~~qa~~~~~~~~v~~~~ 72 (361)
T PRK09795 2 TLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGS--------GYVVISRESAHILVDS-RYYADVEARAQGYQLHLLD 72 (361)
T ss_pred cHHHHHHHHHHHCCCCEEEECCccccccccCccCCC--------eEEEEECCCCEEEcCc-chHHHHHhhCCCceEEEec
Confidence 589999999999999999999999999999999864 6788999999999994 6776766655433333322
Q ss_pred cc-cHHHHHHHHHh--cCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCcccccc
Q 005915 334 YN-SILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSK 410 (670)
Q Consensus 334 y~-~~~~~l~~l~~--~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR 410 (670)
.. .+.+.+.++.. +.++||+|...+++..++.|++.+ +..+++. .+..+|
T Consensus 73 ~~~~~~~~L~~~L~~~~~~~Ig~e~~~~s~~~~~~L~~~l-------------------------~~~~~~~--~~~~lR 125 (361)
T PRK09795 73 ATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSEL-------------------------NAKLVSA--TPDVLR 125 (361)
T ss_pred CCccHHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhc-------------------------Ccccccc--cHHHHh
Confidence 22 23455555543 246899999999999998887642 1234444 379999
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccC
Q 005915 411 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKP 490 (670)
Q Consensus 411 ~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p 490 (670)
+|||++||+.||+|+++++.++..+.+.+ +||+||.|+++.++... ...|+...+|++++++|+|++.||+.|
T Consensus 126 ~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i------~~G~tE~e~~~~~~~~~-~~~G~~~~~f~~iv~sG~~~~~ph~~~ 198 (361)
T PRK09795 126 QIKTPEEVEKIRLACGIADRGAEHIRRFI------QAGMSEREIAAELEWFM-RQQGAEKASFDTIVASGWRGALPHGKA 198 (361)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHH-HHCCCCcCCCCeEEEEeccccccCCCC
Confidence 99999999999999999999999887777 99999999999998764 457888899999999999999999999
Q ss_pred CCCCCcccCCCCeEEEecceeECCeecceEEEEEcCC--CCH---HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHH
Q 005915 491 EPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGE--PTA---REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (670)
Q Consensus 491 ~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~--p~~---e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~ 565 (670)
++ ++|++||+|++|+|+.|+||++|+||||++|. +++ +++++|+++++++.++++++|| |++++||+++++
T Consensus 199 ~~---~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rp-G~~~~~v~~~~~ 274 (361)
T PRK09795 199 SD---KIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRP-GVRCQQVDDAAR 274 (361)
T ss_pred CC---ceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHH
Confidence 76 89999999999999999999999999999963 233 3789999999999999999999 999999999999
Q ss_pred HHHHHcCC--CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecCCCCCCC
Q 005915 566 SSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRF 643 (670)
Q Consensus 566 ~~l~~~G~--~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~g~~~~~ 643 (670)
+++++.|+ .|.|++||||| +++||.|. ++ ++++.+|++||||+||||+|.|+++|+|+||+|+||++
T Consensus 275 ~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~--~~~~~~l~~gmv~~iEpgiy~~~~~gvriEd~v~vt~~------ 343 (361)
T PRK09795 275 RVITEAGYGDYFGHNTGHAIG--IEVHEDPR-FS--PRDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVTPQ------ 343 (361)
T ss_pred HHHHHcCCCccCCCCCCccCC--ccccCCCC-cC--CCCCCCcCCCCEEEECCEEEeCCCCEEEEeeEEEECCC------
Confidence 99999999 48899999999 99999997 54 45889999999999999999999999999999999999
Q ss_pred CCccccceeEccCCCcchhH
Q 005915 644 GGVSYLGFEKLTFVPIQVCH 663 (670)
Q Consensus 644 ~~~~~lG~E~LT~~P~~~~~ 663 (670)
|+|+||..|+++.+
T Consensus 344 ------G~e~Lt~~~~~l~~ 357 (361)
T PRK09795 344 ------GAEVLYAMPKTVLL 357 (361)
T ss_pred ------CcEeCcCCCceEEE
Confidence 89999999998754
No 3
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-60 Score=520.44 Aligned_cols=366 Identities=30% Similarity=0.398 Sum_probs=306.9
Q ss_pred ccccchhHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEe-CCceEEEEeCCCCCHHHHhh
Q 005915 245 LKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVE-MDRAKLFVDDSKVTPDVMDH 323 (670)
Q Consensus 245 ~~~s~~e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt-~~~~~Lfvd~~~~~~~~~~~ 323 (670)
..++..++..|+.+++..|+++++|+++++++.|++||||+... .+.. ...+++. .++++||++..+.. .+...
T Consensus 3 ~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~n~~yltg~~~~--~~~~--~~~~~~~~~~~~~l~~~~~~~~-~~~~~ 77 (384)
T COG0006 3 LRFADEEYRARLARLRELMEEAGLDALLLTSPSNFYYLTGFDAF--GFER--LQALLVPAEGEPVLFVRGRDEE-AAKET 77 (384)
T ss_pred cccchHHHHHHHHHHHHHHHHcCCcEEEecCCCceEEEeCCCCC--cccc--eEEEEEcCCCceEEEEcchhHH-HHHhh
Confidence 45667788999999999999999999999999999999999851 1111 1234444 45689999855432 33332
Q ss_pred hhc--CCeEEEecc--------cHHHHHHHHHhcCCEEEEeCCC--chHHHHHHHHHHHHHhhhcccccccccccccCCC
Q 005915 324 LKN--AGVELRPYN--------SILSEIKSLAAQGAQLWLDPSS--VNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTT 391 (670)
Q Consensus 324 l~~--~~v~i~~y~--------~~~~~l~~l~~~~~rIgve~~~--~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (670)
... ..+...... .+.+.++.......++|++... +++..+..++..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~--------------------- 136 (384)
T COG0006 78 SWIKLENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQAAL--------------------- 136 (384)
T ss_pred cccccCceEEEecCCccccHHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHhhC---------------------
Confidence 211 122221111 1223333332336789999886 6788888887754
Q ss_pred CCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCC
Q 005915 392 GQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDT 471 (670)
Q Consensus 392 ~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~ 471 (670)
+..+++++++++..+|+|||+.||+.||+|+.++++|+.++++++ ++|+||.|++++++..+. ..|+..+
T Consensus 137 ---~~~~~~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~------~~g~tE~ev~a~l~~~~~-~~G~~~~ 206 (384)
T COG0006 137 ---PRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAI------RPGMTEAEIAAELEYALR-KGGAEGP 206 (384)
T ss_pred ---CCCEEeccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHH-HcCCCcc
Confidence 334789999999999999999999999999999999999999988 899999999999998654 4677778
Q ss_pred CCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhC
Q 005915 472 SFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIF 551 (670)
Q Consensus 472 ~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~ 551 (670)
+|++|+++|+|+++||+.|++ +.+++||+|+||+|++|+|||+|+||||++|+|+++|+++|+.|++||+++++++|
T Consensus 207 sf~~iv~~G~n~a~pH~~~~~---~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~r 283 (384)
T COG0006 207 SFDTIVASGENAALPHYTPSD---RKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIR 283 (384)
T ss_pred CcCcEEeccccccCcCCCCCc---ccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999987 88999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHcCC--CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEE
Q 005915 552 PQSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIE 629 (670)
Q Consensus 552 P~G~~~~ev~~~a~~~l~~~G~--~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriE 629 (670)
| |+++.+||.++|+++++.|+ +|.|++|||||+++++||.|..++ +++..+|+|||||++|||+|.++.+|||||
T Consensus 284 p-G~~~~~vd~~ar~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~--~~~~~~L~~GMv~t~Epg~y~~g~~GirIE 360 (384)
T COG0006 284 P-GVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLS--PGSDTTLEPGMVFSIEPGIYIPGGGGVRIE 360 (384)
T ss_pred C-CCcHHHHHHHHHHHHHhcCCcccccCCccccCCCCcccCcCccccC--CCCCccccCCcEEEeccccccCCCceEEEE
Confidence 9 99999999999999999766 699999999999999999995243 468999999999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCccccceeEccCCCcchhHh
Q 005915 630 NLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVCHE 664 (670)
Q Consensus 630 D~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~~i 664 (670)
|+|+||++ |+|+||..|+++..+
T Consensus 361 d~vlVte~------------G~e~LT~~~~~~~~~ 383 (384)
T COG0006 361 DTVLVTED------------GFEVLTRVPKELLVI 383 (384)
T ss_pred EEEEEcCC------------CceecccCCcceeec
Confidence 99999998 899999888887654
No 4
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=1.1e-60 Score=521.02 Aligned_cols=362 Identities=16% Similarity=0.184 Sum_probs=298.1
Q ss_pred ccccchhHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEe-CCceEEEEeCCCCCHHHHhh
Q 005915 245 LKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVE-MDRAKLFVDDSKVTPDVMDH 323 (670)
Q Consensus 245 ~~~s~~e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt-~~~~~Lfvd~~~~~~~~~~~ 323 (670)
+.|+..||++|++|+|+.|+++|+|++|++++.|++|||||.+.. ..+ ..+++|+ +++++++++..... .+...
T Consensus 4 ~~f~~~E~~~Rl~rl~~~m~~~~lDalli~~~~ni~YltG~~~~~-~~~---~~~l~v~~~~~~~l~~~~~~~~-~~~~~ 78 (391)
T TIGR02993 4 LFFTRAEYQARLDKTRAAMEARGIDLLIVTDPSNMAWLTGYDGWS-FYV---HQCVLLPPEGEPIWYGRGQDAN-GAKRT 78 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCcccceeeccCCCCc-eEE---EEEEEEcCCCceEEEehhhhhh-hHhhe
Confidence 569999999999999999999999999999999999999998643 111 2456666 56788888643222 12211
Q ss_pred hhcCCeEEEecc-------------cHHHHHHHHHhcCCEEEEeCCC--chHHHHHHHHHHHHHhhhccccccccccccc
Q 005915 324 LKNAGVELRPYN-------------SILSEIKSLAAQGAQLWLDPSS--VNAAIMNTYEIAIEKYLTSNNNKKSKTKMHT 388 (670)
Q Consensus 324 l~~~~v~i~~y~-------------~~~~~l~~l~~~~~rIgve~~~--~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 388 (670)
.......+..|. .+.+.+++.+...++||+|.+. +++..++.|++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l------------------ 140 (391)
T TIGR02993 79 AFMDHDNIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHL------------------ 140 (391)
T ss_pred eeccccceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhC------------------
Confidence 000001122221 2333344433234589999875 7899999988754
Q ss_pred CCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHh---h
Q 005915 389 DTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---Q 465 (670)
Q Consensus 389 ~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~---~ 465 (670)
++++++|+++++..+|+|||++||+.||+|++++++++.++.+.+ +||+||.|+++.+...... .
T Consensus 141 ------~~~~~~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i------~pG~tE~ei~~~~~~~~~~~~~~ 208 (391)
T TIGR02993 141 ------PNARFVDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERI------EPGMRKCDLVADIYDAGIRGVDG 208 (391)
T ss_pred ------CCCEEEehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHhhhhcccC
Confidence 567899999999999999999999999999999999999988777 9999999999988643222 1
Q ss_pred CCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 005915 466 SGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIA 545 (670)
Q Consensus 466 ~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a 545 (670)
.|...++|.+++++|+|++.+|+.|++ ++|++||+|++|+|+.|+||++|+||||++|+|+++++++|+.+++++.+
T Consensus 209 ~g~~~~~~~~iv~sG~~~a~pH~~~~~---~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~ 285 (391)
T TIGR02993 209 FGGDYPAIVPLLPSGADASAPHLTWDD---SPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEA 285 (391)
T ss_pred cCCCcCCcccccccCccccCCCCCCCC---CcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 244456777899999999999999876 89999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCChhHHHHHHHHHHHHcCCCCccCcccccccCCccccC-----CCcccccCCCCccccCCCEEEECceeee
Q 005915 546 LDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEG-----PQSISFRYGNMTPLVEGMIVSNEPGYYE 620 (670)
Q Consensus 546 ~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~~h~~GHgiG~~l~~hE~-----P~~i~~~~~~~~~L~~GMV~siEPgiy~ 620 (670)
+++++|| |++++||++++++++++.|+...|++||||| ++.|+. |. ++ ++++.+|++||||++|||+|.
T Consensus 286 ~i~~ikp-G~~~~dv~~~~~~~~~~~G~~~~h~~GhgiG--l~~~~~~~e~~~~-l~--~~~~~~L~~GMv~tvEpgiy~ 359 (391)
T TIGR02993 286 GLEAAKP-GNTCEDIANAFFAVLKKYGIHKDSRTGYPIG--LSYPPDWGERTMS-LR--PGDNTVLKPGMTFHFMTGLWM 359 (391)
T ss_pred HHHHcCC-CCcHHHHHHHHHHHHHHcCCccCCCceeeec--cCcCCCCCCcccc-cc--CCCCceecCCCEEEEcceeEe
Confidence 9999999 9999999999999999999987899999999 888742 33 43 458899999999999999999
Q ss_pred cCcceEEEEEEEEEecCCCCCCCCCccccceeEccCCCcchhH
Q 005915 621 DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVCH 663 (670)
Q Consensus 621 ~~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~~ 663 (670)
++ +|+|+||+|+||++ |+|.||..|+++.+
T Consensus 360 ~~-~Gvried~v~VT~~------------G~e~Lt~~p~~l~~ 389 (391)
T TIGR02993 360 ED-WGLEITESILITET------------GVECLSSVPRKLFV 389 (391)
T ss_pred CC-CCeEEeeEEEECCC------------cceecccCCcccEe
Confidence 87 59999999999999 89999999998754
No 5
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=1e-57 Score=499.44 Aligned_cols=357 Identities=17% Similarity=0.182 Sum_probs=293.5
Q ss_pred HHHHHHHHHHHcCCCEEEEcCcccccccccccccCC-CCCceeeEEEEEeCC-c-eE-EEEeCCCCCHHHH-hhh--hcC
Q 005915 255 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDV-PHSPVMYAYLIVEMD-R-AK-LFVDDSKVTPDVM-DHL--KNA 327 (670)
Q Consensus 255 Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~-~~~P~~~~~llvt~~-~-~~-Lfvd~~~~~~~~~-~~l--~~~ 327 (670)
-++|+|+.|+++|+|++||++++|++|||||.+... .++|...+.++|+.+ + |. +++++.+... ++ +.. ...
T Consensus 12 ~~~rlr~~m~~~glD~lvl~~p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E~~~-~~~~~~~~~~~ 90 (406)
T PRK14575 12 VSRKLRTIMERDNIDAVIVTTCDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFEAAS-LTLDMPNAELK 90 (406)
T ss_pred HHHHHHHHHHHcCCCEEeecCcchheeecccccccceecccCCceEEEEEcCCCCCceEEechhhhhh-hcccccccccc
Confidence 478999999999999999999999999999987542 334544456778765 3 56 6666443331 22 110 000
Q ss_pred Ce--EE---Eecc----------------------cHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhccccc
Q 005915 328 GV--EL---RPYN----------------------SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNK 380 (670)
Q Consensus 328 ~v--~i---~~y~----------------------~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~ 380 (670)
.+ .. .+|. .+.+.|++.+..+++||+|.+.++...++.|+..+
T Consensus 91 ~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~l---------- 160 (406)
T PRK14575 91 TFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVIDAVM---------- 160 (406)
T ss_pred cCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccCCCCHHHHHHHHHhC----------
Confidence 11 11 1332 12233433333468999999999999999988753
Q ss_pred ccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHH
Q 005915 381 KSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLE 460 (670)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~ 460 (670)
|+++++|++.++..+|+|||++||+.||+|++++++++.++++.+ +||+||.|+++.+..
T Consensus 161 --------------p~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i------~pG~tE~elaa~~~~ 220 (406)
T PRK14575 161 --------------PNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLI------RVGCTSAELTAAYKA 220 (406)
T ss_pred --------------CCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHH
Confidence 578899999999999999999999999999999999999988777 999999999999976
Q ss_pred HHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHH
Q 005915 461 FRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVL 540 (670)
Q Consensus 461 ~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~ 540 (670)
.... .|....++.+++++|++ +.+|+.|++ +++++||+|++|+|+.|+||++|+||||++|+|+++|+++|++++
T Consensus 221 ~~~~-~g~~~~~~~~~v~~G~~-~~~h~~~~~---~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~ 295 (406)
T PRK14575 221 AVMS-KSETHFSRFHLISVGAD-FSPKLIPSN---TKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIR 295 (406)
T ss_pred HHHH-cCCCcCCcCceEEECCC-cccCCCCCC---CcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHH
Confidence 5443 34434444478889987 568998876 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--CccCcccccccCCccccCCCcccccCCCCccccCCCEEEECcee
Q 005915 541 QGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGY 618 (670)
Q Consensus 541 ~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgi 618 (670)
++++++++++|| |+++++|++++++++++.|+. +.|++|||||+.+.+||.|+ +. .+++.+|++||||++|||+
T Consensus 296 ~a~~~~~~~~rp-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~-i~--~~~~~~Le~GMv~tiEpgi 371 (406)
T PRK14575 296 TGHEHMLSMVAP-GVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPF-VS--THATESFTSGMVLSLETPY 371 (406)
T ss_pred HHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCCCCccCCC-CC--CCCCCCcCCCCEEEECCee
Confidence 999999999999 999999999999999999993 67999999996668999998 44 3578999999999999999
Q ss_pred eecCcceEEEEEEEEEecCCCCCCCCCccccceeEccCCCcchhH
Q 005915 619 YEDHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVCH 663 (670)
Q Consensus 619 y~~~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~~ 663 (670)
|.++.+|+|+||+|+||++ |+|+||..|+++..
T Consensus 372 y~~g~gGvriEDtvlVT~~------------G~e~LT~~p~~l~~ 404 (406)
T PRK14575 372 YGYNLGSIMIEDMILINKE------------GIEFLSKLPRDLVS 404 (406)
T ss_pred ecCCCcEEEEEeEEEEcCC------------CcccCCCCCccccc
Confidence 9999999999999999999 89999999998753
No 6
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=2.2e-56 Score=488.83 Aligned_cols=356 Identities=17% Similarity=0.169 Sum_probs=290.6
Q ss_pred HHHHHHHHHHHcCCCEEEEcCcccccccccccccCC-CCCceeeEEEEEeCC--ce-EEEEeCCCCCHHHH-----hhhh
Q 005915 255 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDV-PHSPVMYAYLIVEMD--RA-KLFVDDSKVTPDVM-----DHLK 325 (670)
Q Consensus 255 Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~-~~~P~~~~~llvt~~--~~-~Lfvd~~~~~~~~~-----~~l~ 325 (670)
-.+|+|+.|+++|+|++|+++|+||+||||+....+ .+.+....+++++.+ ++ .++++..+... ++ ..+.
T Consensus 12 ~~~r~r~~M~~~gldalll~~p~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~~~-~~~~~~~~~~~ 90 (405)
T PRK14576 12 VSRKARVVMEREGIDALVVTVCDNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEAAS-THFDMPNSVLK 90 (405)
T ss_pred HHHHHHHHHHHcCCCEEEeccccceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhhhh-hhccccccccc
Confidence 346899999999999999999999999999987532 223433345555544 35 66776443221 11 0111
Q ss_pred cCCeEEE---e---c------------------ccHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccc
Q 005915 326 NAGVELR---P---Y------------------NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKK 381 (670)
Q Consensus 326 ~~~v~i~---~---y------------------~~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~ 381 (670)
...+... + | +.+.+.|++++..+++||+|.+.++...+..|...+
T Consensus 91 ~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~~----------- 159 (405)
T PRK14576 91 TFPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQAMSNGGKGVLDKVA----------- 159 (405)
T ss_pred cCCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCCCCHHHHHHHHhhC-----------
Confidence 1101111 1 1 122244555444568999999988888888887643
Q ss_pred cccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHH
Q 005915 382 SKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEF 461 (670)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~ 461 (670)
|+.+++|++.++.++|+|||++||+.||+|+++++.++.++++.+ +||+||.|+++.++..
T Consensus 160 -------------~~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i------~pG~tE~elaa~~~~~ 220 (405)
T PRK14576 160 -------------PGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKI------RVGCTAAELTAAFKAA 220 (405)
T ss_pred -------------CCCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHH
Confidence 678899999999999999999999999999999999999988777 9999999999999875
Q ss_pred HHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHH
Q 005915 462 RSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQ 541 (670)
Q Consensus 462 ~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~ 541 (670)
... .|....++.+++++|++ +.+|+.|++ +++++||+|++|+|+.|+||++|+||||++|+|+++|+++|+++++
T Consensus 221 ~~~-~g~~~~~~~~~v~~G~~-~~~h~~~~~---~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~ 295 (405)
T PRK14576 221 VMS-FPETNFSRFNLISVGDN-FSPKIIADT---TPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRT 295 (405)
T ss_pred HHH-cCCCcCCCCCEEEECCc-ccCCCCCCC---cccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHH
Confidence 443 45333444478999999 568998876 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--CccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceee
Q 005915 542 GHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY 619 (670)
Q Consensus 542 a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy 619 (670)
+++++++++|| |++++||++++++++++.|+. +.|++|||+|+++..||.|. +. ++++.+|++||||++||++|
T Consensus 296 a~~a~~~~~rP-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P~-i~--~~~~~~Le~GMv~~vEp~~y 371 (405)
T PRK14576 296 GHEHMLSMVAP-GVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEVPF-VS--TQATETFCPGMVLSLETPYY 371 (405)
T ss_pred HHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcCCC-cC--CCCCCccCCCCEEEECCcee
Confidence 99999999999 999999999999999999983 66899999997788999997 54 45789999999999999999
Q ss_pred ecCcceEEEEEEEEEecCCCCCCCCCccccceeEccCCCcchh
Q 005915 620 EDHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVC 662 (670)
Q Consensus 620 ~~~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~ 662 (670)
.+|.+|+|+||+|+||++ |+|.||..|+++.
T Consensus 372 ~~g~ggvriEDtvlVTe~------------G~e~LT~~p~~l~ 402 (405)
T PRK14576 372 GIGVGSIMLEDMILITDS------------GFEFLSKLDRDLR 402 (405)
T ss_pred ecCCCEEEEeeEEEECCC------------ccccCCCCCcccc
Confidence 999999999999999999 8999999999864
No 7
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=2.6e-51 Score=452.09 Aligned_cols=364 Identities=20% Similarity=0.238 Sum_probs=286.6
Q ss_pred cchhHHHHHHHHHHHHHHcCCCEEEEcCc----------------ccccccccccccCCCCCceeeEEEEEeC-C----c
Q 005915 248 AGLDVASKLSSLRSDLVDAGSSAIVISML----------------DEIAWLLNLRGSDVPHSPVMYAYLIVEM-D----R 306 (670)
Q Consensus 248 s~~e~~~Rl~rlr~~M~e~glDallis~~----------------~ni~YLtGf~g~~~~~~P~~~~~llvt~-~----~ 306 (670)
+..+|..|+++|.+.|.+.+ .+|+.+. .|++||||+.-.+ +++++.+ + .
T Consensus 2 ~~~~~~~rR~~l~~~~~~~~--~~v~~~~~~~~~~~d~~y~Frq~s~F~YltG~~ep~--------~~lv~~~~~~~~~~ 71 (438)
T PRK10879 2 TQQEFQRRRQALLAKMQPGS--AALIFAAPEATRSADSEYPYRQNSDFWYFTGFNEPE--------AVLVLIKSDDTHNH 71 (438)
T ss_pred ChHHHHHHHHHHHhhCCCCc--EEEEeCCCccccCCCCCCCccCCCceeeeeCCCCCC--------eEEEEecCCCCCCe
Confidence 45689999999999997643 4444332 4699999987433 5555532 2 3
Q ss_pred eEEEEeCCCCCHH--------HHhhhhcCCe-EEEecccHHHHHHHHHhcCCEEEEeCCCch------HHHHHHHHHHHH
Q 005915 307 AKLFVDDSKVTPD--------VMDHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVN------AAIMNTYEIAIE 371 (670)
Q Consensus 307 ~~Lfvd~~~~~~~--------~~~~l~~~~v-~i~~y~~~~~~l~~l~~~~~rIgve~~~~s------~~~~~~L~~~~~ 371 (670)
.+||++......+ ..+.....++ ++.+++++.+.|.++..+...+..+....+ ...++.+.....
T Consensus 72 ~~Lf~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (438)
T PRK10879 72 SVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLNGLDVVYHAQGEYAYADEIVFSALEKLRKGSR 151 (438)
T ss_pred EEEEeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhcCCceEEecCCccccchhHHHHHHHHHHhhhc
Confidence 5899864432111 1111122455 478889999999887655555665544321 112222222110
Q ss_pred HhhhcccccccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCH
Q 005915 372 KYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTE 451 (670)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE 451 (670)
....+...++|+..++.++|+|||++||+.||+|+++++.++.++++.+ +||+||
T Consensus 152 -------------------~~~~~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~------~pG~tE 206 (438)
T PRK10879 152 -------------------QNLTAPATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKC------RPGMFE 206 (438)
T ss_pred -------------------cccCCcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCcH
Confidence 0112446788999999999999999999999999999999999988776 899999
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEc-CCCCH
Q 005915 452 VDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTA 530 (670)
Q Consensus 452 ~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~v-G~p~~ 530 (670)
.|+++.+.... ...|....+|++++++|.|++.+||.|++ +.|++||+|++|+|+.|+||++|+||||++ |++++
T Consensus 207 ~ei~a~~~~~~-~~~G~~~~~~~~iv~~G~na~~~H~~~~~---~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~ 282 (438)
T PRK10879 207 YQLEGEIHHEF-NRHGARYPSYNTIVGSGENGCILHYTENE---SEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTP 282 (438)
T ss_pred HHHHHHHHHHH-HHCCCCCCCCCcEEEEcCccccccCCCCc---cccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCH
Confidence 99999987653 45677778999999999999999999876 899999999999999999999999999998 89999
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHH------------------HcCC--CCccCcccccccCCccc
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLW------------------KIGL--DYRHGTGHGVGAALNVH 590 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~------------------~~G~--~~~h~~GHgiG~~l~~h 590 (670)
+|+++|++++++++++++++|| |+++++|+.++.+++. +.|+ .|.|++||+|| |++|
T Consensus 283 ~q~~~y~~vl~a~~aai~~~kp-G~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iG--ldvH 359 (438)
T PRK10879 283 AQREIYDIVLESLETSLRLYRP-GTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLG--LDVH 359 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccC--cCcC
Confidence 9999999999999999999999 9999999999986643 2343 47899999999 9999
Q ss_pred cCCCcccccCCCCccccCCCEEEECceeeecC---------cceEEEEEEEEEecCCCCCCCCCccccceeEccC-CCcc
Q 005915 591 EGPQSISFRYGNMTPLVEGMIVSNEPGYYEDH---------AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQ 660 (670)
Q Consensus 591 E~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~---------~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~-~P~~ 660 (670)
|.|. +. ++++.+|+|||||+||||+|.+. .+|+||||+|+||++ |+|+||. +|++
T Consensus 360 d~~~-~~--~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~~------------G~e~LT~~~pk~ 424 (438)
T PRK10879 360 DVGV-YG--QDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITET------------GNENLTASVVKK 424 (438)
T ss_pred cCCC-cC--CCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECCC------------cCeEcCccCCCC
Confidence 9986 33 34678999999999999999863 369999999999999 8999996 9999
Q ss_pred hhHhhhhh
Q 005915 661 VCHENRIA 668 (670)
Q Consensus 661 ~~~i~~~~ 668 (670)
...|+.++
T Consensus 425 ~~~iE~~m 432 (438)
T PRK10879 425 PDEIEALM 432 (438)
T ss_pred HHHHHHHH
Confidence 99998775
No 8
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=1.6e-50 Score=429.55 Aligned_cols=275 Identities=18% Similarity=0.188 Sum_probs=242.7
Q ss_pred HHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCccccccccCCHHH
Q 005915 338 LSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAE 417 (670)
Q Consensus 338 ~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~E 417 (670)
.+.|++++...++||+|.+.++...++.|++.+ |+++++|+++++..+|+|||++|
T Consensus 45 ~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~l------------------------~~~~~~d~~~~i~~lR~iKs~~E 100 (323)
T PRK15173 45 KDALNDARVLNKKIAIDLNIMSNGGKRVIDAVM------------------------PNVDFVDSSSIFNELRVIKSPWE 100 (323)
T ss_pred HHHHHHcCccCCEEEEecCccCHHHHHHHHhhC------------------------CCCeEEEhHHHHHHHHccCCHHH
Confidence 334444544568999999999999999998754 56789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcc
Q 005915 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (670)
Q Consensus 418 Ie~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~ 497 (670)
|+.||+|++++++++.++.+.+ ++|+||.|+++.+...... .|....++.+++++|++ ..+|+.|++ +.
T Consensus 101 I~~mr~A~~i~~~~~~~~~~~i------~~G~tE~el~a~~~~~~~~-~g~~~~~~~~~i~~G~~-~~~h~~~~~---~~ 169 (323)
T PRK15173 101 IKRLRKSAEITEYGITEASKLI------RVGCTSAELTAAYKAAVMS-KSETHFSRFHLISVGAD-FSPKLIPSN---TK 169 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHH-cCCCCCCCCcEEEECCC-CccCCCCCC---Cc
Confidence 9999999999999999887776 8999999999999765443 44434444467888987 467888875 89
Q ss_pred cCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--C
Q 005915 498 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--Y 575 (670)
Q Consensus 498 i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~ 575 (670)
+++||+|++|+|+.|+||++|+||||++|+|+++|+++|++++++++++++++|| |+++++|++++++++++.|+. +
T Consensus 170 l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irP-G~~~~dv~~a~~~~~~~~G~~~~~ 248 (323)
T PRK15173 170 ACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAP-GVKMKDVFDSTMEVIKKSGLPNYN 248 (323)
T ss_pred cCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999993 6
Q ss_pred ccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecCCCCCCCCCccccceeEcc
Q 005915 576 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLT 655 (670)
Q Consensus 576 ~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT 655 (670)
.|++|||||+++++||.|. +. ++++.+|++||||++|||+|.++.+|+|+||+|+||++ |+|+||
T Consensus 249 ~~~~GHGiG~~lg~~E~P~-i~--~~~~~~Le~GMV~tiEPgiy~~g~ggvriEDtvlVTe~------------G~e~LT 313 (323)
T PRK15173 249 RGHLGHGNGVFLGLEESPF-VS--THATESFTSGMVLSLETPYYGYNLGSIMIEDMILINKE------------GIEFLS 313 (323)
T ss_pred CCCCCCcCCCCCCcCCCCC-CC--CCCCCccCCCCEEEECCEEEcCCCcEEEEeeEEEEcCC------------cceeCC
Confidence 6899999997779999998 44 24778999999999999999999999999999999999 899999
Q ss_pred CCCcchhH
Q 005915 656 FVPIQVCH 663 (670)
Q Consensus 656 ~~P~~~~~ 663 (670)
..|+++..
T Consensus 314 ~~p~~l~~ 321 (323)
T PRK15173 314 KLPRDLVS 321 (323)
T ss_pred CCCcccee
Confidence 99998754
No 9
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=2.4e-45 Score=403.71 Aligned_cols=233 Identities=25% Similarity=0.282 Sum_probs=200.2
Q ss_pred cceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeE
Q 005915 398 AGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTIS 477 (670)
Q Consensus 398 ~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv 477 (670)
+..+....|..+|+|||++||+.||+|++++++++.++++.+ ++|+||.|+.+.+... ...+....+|++|+
T Consensus 147 ~~~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~pG~tE~ei~~~~~~~--~~~~~~~~~y~~iv 218 (443)
T PRK13607 147 NPKGVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAF------RAGMSEFDINLAYLTA--TGQRDNDVPYGNIV 218 (443)
T ss_pred ChHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHh------hcCCCHHHHHHHHHHH--hCCCCcCCCCCcEE
Confidence 344567788999999999999999999999999999988777 8999999999876532 23445568999999
Q ss_pred eeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCh
Q 005915 478 GSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPG 557 (670)
Q Consensus 478 ~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~ 557 (670)
++|+|++++||.+++ .+.+++||+|++|+|+.|+||++|+||||+ |+++++++++|++++++++++++++|| |+++
T Consensus 219 a~G~naa~~H~~~~~--~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikP-G~~~ 294 (443)
T PRK13607 219 ALNEHAAVLHYTKLD--HQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKP-GVSY 294 (443)
T ss_pred EecCcceEecCCccC--CCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccC-CCCH
Confidence 999999999999875 246899999999999999999999999999 889999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHH----Hc--------------CC---CCccCcccccccCCccccCCCccc-------------ccCCCC
Q 005915 558 FVLDAFARSSLW----KI--------------GL---DYRHGTGHGVGAALNVHEGPQSIS-------------FRYGNM 603 (670)
Q Consensus 558 ~ev~~~a~~~l~----~~--------------G~---~~~h~~GHgiG~~l~~hE~P~~i~-------------~~~~~~ 603 (670)
.||+.++++++. +. |+ .|.|++||+|| |++||.+.... +.....
T Consensus 295 ~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iG--ldvHd~~~~~~~~~~~~~~~~~~~~~l~~~ 372 (443)
T PRK13607 295 VDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLG--LQVHDVAGFMQDDRGTHLAAPEKHPYLRCT 372 (443)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccC--cccccCCCcccccccccccccccccccccC
Confidence 999999987663 23 33 47899999999 99999753100 000245
Q ss_pred ccccCCCEEEECceeeecC-------------------------cceEEEEEEEEEecCCCCCCCCCccccceeEccC
Q 005915 604 TPLVEGMIVSNEPGYYEDH-------------------------AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (670)
Q Consensus 604 ~~L~~GMV~siEPgiy~~~-------------------------~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~ 656 (670)
.+|+||||||||||+|+++ .|||||||+|+||++ |+|+||.
T Consensus 373 ~~L~~GmV~TvEPGiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~------------G~e~Lt~ 438 (443)
T PRK13607 373 RVLEPGMVLTIEPGLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHEN------------GVENMTR 438 (443)
T ss_pred CcCCCCcEEEECCeeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCC------------CCeECCh
Confidence 8999999999999999974 579999999999999 8999985
No 10
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=8.4e-45 Score=372.90 Aligned_cols=222 Identities=18% Similarity=0.183 Sum_probs=200.8
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCC-----CCCCceeEeeCCCCcc
Q 005915 411 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGANGAI 485 (670)
Q Consensus 411 ~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~-----~~~f~~iv~sG~~~a~ 485 (670)
.||||+||+.||+|+++++.++..+++.+ +||+||.|+++.++.... ..|+. ..+|++++++|+|++.
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~------~~G~tE~el~~~~~~~~~-~~G~~~~~~~~~~~~~~i~~g~n~~~ 75 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIM------KPGITTKEINTFVEAYLE-KHGATSEQKGYNGYPYAICASVNDEM 75 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCcHHHHHHHHHHHHH-HcCCcccccccCCCCcceEeccCCEe
Confidence 68999999999999999999999888777 999999999999987643 45654 2478888899999999
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHH
Q 005915 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (670)
Q Consensus 486 ~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~ 565 (670)
+|+.|++ ++|++||+|++|+|+.|+||++|++|||++|+|+++|+++|+++++++++++++++| |++++||+.+++
T Consensus 76 ~H~~p~~---~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kp-G~~~~dv~~a~~ 151 (248)
T PRK12897 76 CHAFPAD---VPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVI-GNRVGDIGYAIE 151 (248)
T ss_pred ecCCCCC---cccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcC-CCccchHHHHHH
Confidence 9999986 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CccCcccccccCCccccCCCcccc-cCCCCccccCCCEEEECceee-----------------ecCcceE
Q 005915 566 SSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYY-----------------EDHAFGI 626 (670)
Q Consensus 566 ~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy-----------------~~~~~Gv 626 (670)
+++++.|+. +.|++||||| +++||.|.+... .+++..+|++||||++||++| .+|.+|+
T Consensus 152 ~~~~~~g~~~~~~~~GHgiG--l~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~ 229 (248)
T PRK12897 152 SYVANEGFSVARDFTGHGIG--KEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSA 229 (248)
T ss_pred HHHHHcCCccCCCeEECccC--CcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEe
Confidence 999999995 6799999999 999999984322 235678999999999999999 3566899
Q ss_pred EEEEEEEEecCCCCCCCCCccccceeEccCC
Q 005915 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTFV 657 (670)
Q Consensus 627 riED~v~Vte~g~~~~~~~~~~lG~E~LT~~ 657 (670)
|+||||+||++ |+|.||.+
T Consensus 230 r~edtv~Vt~~------------G~e~lt~~ 248 (248)
T PRK12897 230 QYEHTIAITKD------------GPIILTKL 248 (248)
T ss_pred ecceEEEEeCC------------ccEEeecC
Confidence 99999999999 89999963
No 11
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.3e-44 Score=374.00 Aligned_cols=227 Identities=18% Similarity=0.157 Sum_probs=202.6
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCC-------C--CCCCceeEeeC
Q 005915 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGF-------L--DTSFDTISGSG 480 (670)
Q Consensus 410 R~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~-------~--~~~f~~iv~sG 480 (670)
..+||++||+.||+|++++++++.++.+.+ +||+||.||++.++....+ .|+ . ..+|++++++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i------~pG~te~ei~~~~~~~~~~-~g~~~~~~G~~~~~~~f~~~v~~G 74 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLI------KPGVDMWEVEEYVRRRCKE-ENVLPLQIGVDGAMMDYPYATCCG 74 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHC------cCCCcHHHHHHHHHHHHHH-cCCcccccCCCCcccCCCcceEEe
Confidence 368999999999999999999998877666 9999999999999875433 332 2 26799999999
Q ss_pred CCCccccccCCCCCCcccCCCCeEEEecce---------------------------eECCeecceEEEEEcCCCCHHHH
Q 005915 481 ANGAIIHYKPEPGKCSVVDSKKLFLLDSGA---------------------------QYVDGTTDITRTVHFGEPTAREK 533 (670)
Q Consensus 481 ~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~---------------------------~~~gY~sD~tRT~~vG~p~~e~~ 533 (670)
.|++.+|+.|++ ++|++||+|++|+|+ .|+||++|++|||++|+|+++|+
T Consensus 75 ~n~~~~H~~p~~---~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~ 151 (286)
T PRK07281 75 LNDEVAHAFPRH---YILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVK 151 (286)
T ss_pred ccccccCCCCCC---cCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHH
Confidence 999999999986 899999999999997 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-CccCcccccccCCccccCCCcccc-cCCCCccccCCCE
Q 005915 534 ECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMI 611 (670)
Q Consensus 534 ~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~-~~~~~~~L~~GMV 611 (670)
++|+++++++.++++++|| |++++||++++++++++.|+. +.|++||||| +++||.|.+... .++++.+|+||||
T Consensus 152 ~l~~~~~ea~~~ai~~~kp-G~~~~di~~a~~~~~~~~G~~~~~~~~GHGIG--l~~hE~P~i~~~~~~~~~~~Le~GMV 228 (286)
T PRK07281 152 NLMDVTKEAMYRGIEQAVV-GNRIGDIGAAIQEYAESRGYGVVRDLVGHGVG--PTMHEEPMVPNYGTAGRGLRLREGMV 228 (286)
T ss_pred HHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCccCCCeeeeeCC--CccCCCCcCCCcccCCCCCEECCCCE
Confidence 9999999999999999999 999999999999999999995 7799999999 999999973222 2457789999999
Q ss_pred EEECceeee------------------cCcceEEEEEEEEEecCCCCCCCCCccccceeEccCCCcch
Q 005915 612 VSNEPGYYE------------------DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQV 661 (670)
Q Consensus 612 ~siEPgiy~------------------~~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~ 661 (670)
|+|||++|. |+.+|+|+||+|+||++ |+|.||..+.++
T Consensus 229 ~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~------------G~e~LT~~~~~~ 284 (286)
T PRK07281 229 LTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKD------------GPVILTSQGEER 284 (286)
T ss_pred EEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEeCC------------cceECCCCCccc
Confidence 999999985 45668999999999999 899999988765
No 12
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=8.4e-44 Score=371.97 Aligned_cols=231 Identities=20% Similarity=0.237 Sum_probs=203.4
Q ss_pred Cccccccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCC-------CCCCce
Q 005915 404 SPIAFSKA-VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-------DTSFDT 475 (670)
Q Consensus 404 ~~i~~lR~-vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~-------~~~f~~ 475 (670)
+.++.+|. |||++||+.||+|+++++.++.++++.+ ++|+||.||++.++... ...|.. ..+|++
T Consensus 34 ~~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~i------rpG~tE~Eiaa~~~~~~-~~~G~~~~~~~~~~~~f~~ 106 (291)
T PRK12318 34 LYASQYDIIIKTPEQIEKIRKACQVTARILDALCEAA------KEGVTTNELDELSRELH-KEYNAIPAPLNYGSPPFPK 106 (291)
T ss_pred hccCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHH-HHcCCCccccccCCCCCCc
Confidence 33455665 9999999999999999999999888777 99999999998877653 334432 347888
Q ss_pred eEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 005915 476 ISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQST 555 (670)
Q Consensus 476 iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~ 555 (670)
++++|.|++++|+.|++ ++|++||+|++|+|+.|+||++|++|||++|+|+++|+++|++++++++++++++|| |+
T Consensus 107 ~v~~g~n~~~~H~~p~~---~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rp-G~ 182 (291)
T PRK12318 107 TICTSLNEVICHGIPND---IPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKP-GI 182 (291)
T ss_pred ceEeeccceeecCCCCC---CccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 99999999999999976 899999999999999999999999999999999999999999999999999999999 99
Q ss_pred ChhHHHHHHHHHHHHcCCC-CccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcc---------e
Q 005915 556 PGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAF---------G 625 (670)
Q Consensus 556 ~~~ev~~~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~---------G 625 (670)
++++|++++++++++.|+. ..|++||||| +++||.|++....++++.+|++||||+|||++|.++.+ |
T Consensus 183 ~~~dv~~a~~~~~~~~G~~~~~~~~GHgIG--l~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~ 260 (291)
T PRK12318 183 PLYEIGEVIENCADKYGFSVVDQFVGHGVG--IKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWE 260 (291)
T ss_pred CHHHHHHHHHHHHHHcCCccCCCcccCCcC--ccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcE
Confidence 9999999999999999995 5689999999 99999998444334567899999999999999987433 2
Q ss_pred ---------EEEEEEEEEecCCCCCCCCCccccceeEccCCCc
Q 005915 626 ---------IRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPI 659 (670)
Q Consensus 626 ---------vriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~ 659 (670)
+++||||+||++ |+|.||.+|+
T Consensus 261 ~~~~~g~~~~~~edtv~VTe~------------G~e~LT~~~~ 291 (291)
T PRK12318 261 ARTCDNQPSAQWEHTILITET------------GYEILTLLDK 291 (291)
T ss_pred EEecCCCeeeeeeeEEEEcCC------------cceeCCCCCC
Confidence 347999999999 8999999885
No 13
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.7e-43 Score=357.72 Aligned_cols=377 Identities=22% Similarity=0.302 Sum_probs=277.9
Q ss_pred CCCCCCcccccccc----cccchhHHHHHHHHHHHHHHcCCCEEEEcCc----------------ccccccccccccCCC
Q 005915 232 RPKPPNKPIRVHAL----KYAGLDVASKLSSLRSDLVDAGSSAIVISML----------------DEIAWLLNLRGSDVP 291 (670)
Q Consensus 232 rp~~~~~~~~~~~~----~~s~~e~~~Rl~rlr~~M~e~glDallis~~----------------~ni~YLtGf~g~~~~ 291 (670)
+|-+.+.|-..-+- ..+..||..|+.||.+.|.++. .+|+++. .|++||||+...+
T Consensus 43 Qpt~~thPhli~pgEltPgis~~Ey~~RR~rl~~ll~~~a--~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP~-- 118 (488)
T KOG2414|consen 43 QPTSVTHPHLIQPGELTPGISATEYKERRSRLMSLLPANA--MVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEPD-- 118 (488)
T ss_pred CCCCCCCccccCCCCcCCCccHHHHHHHHHHHHHhCCccc--EEEEccCchhhhcCccceeeecCCCeEEEeccCCCC--
Confidence 35555544443332 3567899999999999999865 3444332 4688888876544
Q ss_pred CCceeeEEEEEe--CC---ceEEEEeCCCCCHHHHhhhhcCCe----------EEEecccHHHHHHHHHhcCCEEEEeCC
Q 005915 292 HSPVMYAYLIVE--MD---RAKLFVDDSKVTPDVMDHLKNAGV----------ELRPYNSILSEIKSLAAQGAQLWLDPS 356 (670)
Q Consensus 292 ~~P~~~~~llvt--~~---~~~Lfvd~~~~~~~~~~~l~~~~v----------~i~~y~~~~~~l~~l~~~~~rIgve~~ 356 (670)
+.+++. +. ...+|++...-.++..+-.. .++ +-.+.+++..+|.+......+++++..
T Consensus 119 ------~vl~l~~~d~~s~~~~lf~p~kdP~~e~WeG~r-tG~~~a~~if~v~ea~~~s~l~~~L~k~~~~~~~i~~d~~ 191 (488)
T KOG2414|consen 119 ------AVLLLLKGDERSVAYDLFMPPKDPTAELWEGPR-TGTDGASEIFGVDEAYPLSGLAVFLPKMSALLYKIWQDKA 191 (488)
T ss_pred ------eeEEEeecccccceeeEecCCCCccHHhhcCcc-ccchhhhhhhcchhhcchhhHHHHHHHHHhhhhhhhhhhc
Confidence 455553 22 24577764433333322111 111 111222333333333222345666644
Q ss_pred CchH-HHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHH
Q 005915 357 SVNA-AIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQF 435 (670)
Q Consensus 357 ~~s~-~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~ 435 (670)
.... ..++.++...+ .++.+-++..+..++.++|.||||+|++.||+|+.|+..++...
T Consensus 192 ss~a~s~~~~~~dl~~--------------------~~~~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~ 251 (488)
T KOG2414|consen 192 SSKASSALKNMQDLLG--------------------FQSKSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFSET 251 (488)
T ss_pred cchhhhHHHHHHhhhh--------------------hcccCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHH
Confidence 3221 12222222211 11122357788999999999999999999999999999877544
Q ss_pred HHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCe
Q 005915 436 WVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDG 515 (670)
Q Consensus 436 ~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY 515 (670)
+ ..+++...|..+.+.++. .....|+...+|+|+|+.|.|+..+||..++ ..++++|+|++|.||.+.||
T Consensus 252 m------~~sr~~~~E~~l~a~~ey-e~r~rGad~~AYpPVVAgG~na~tIHY~~Nn---q~l~d~emVLvDaGcelgGY 321 (488)
T KOG2414|consen 252 M------FGSRDFHNEAALSALLEY-ECRRRGADRLAYPPVVAGGKNANTIHYVRNN---QLLKDDEMVLVDAGCELGGY 321 (488)
T ss_pred H------hhccCCcchhhHhhhhhh-heeecCccccccCCeeecCcccceEEEeecc---cccCCCcEEEEecCcccCce
Confidence 3 334789999999999984 3456799899999999999999999999876 89999999999999999999
Q ss_pred ecceEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhhCC-CCCChhHHHHHHHH----HHHHcCC-------------CCc
Q 005915 516 TTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFP-QSTPGFVLDAFARS----SLWKIGL-------------DYR 576 (670)
Q Consensus 516 ~sD~tRT~~v-G~p~~e~~~~~~~v~~a~~a~~~~~~P-~G~~~~ev~~~a~~----~l~~~G~-------------~~~ 576 (670)
++|+||||.+ |..++-|+++|+++++.|+.+++.++| .|++..+|+..... .+++.|+ .++
T Consensus 322 vSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcP 401 (488)
T KOG2414|consen 322 VSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCP 401 (488)
T ss_pred EccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCC
Confidence 9999999998 999999999999999999999999987 58999999887654 4456675 268
Q ss_pred cCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCc---------ceEEEEEEEEEecCCCCCCCCCcc
Q 005915 577 HGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHA---------FGIRIENLLYVKEVGTPNRFGGVS 647 (670)
Q Consensus 577 h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~---------~GvriED~v~Vte~g~~~~~~~~~ 647 (670)
|++||-+| |++|+-|- ++ .+.+|+|||||+||||+|+|.. -|+||||.|+|+++
T Consensus 402 HhVgHyLG--mDVHD~p~-v~----r~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGIGiRIEDDV~i~ed---------- 464 (488)
T KOG2414|consen 402 HHVGHYLG--MDVHDCPT-VS----RDIPLQPGMVITIEPGVYIPEDDDPPEEFRGIGIRIEDDVAIGED---------- 464 (488)
T ss_pred cccchhcC--cccccCCC-CC----CCccCCCCceEEecCceecCccCCCchHhcCceEEeecceEeccC----------
Confidence 99999999 99999997 43 4689999999999999998642 39999999999999
Q ss_pred ccceeEccC-CCcchhHhhhhh
Q 005915 648 YLGFEKLTF-VPIQVCHENRIA 668 (670)
Q Consensus 648 ~lG~E~LT~-~P~~~~~i~~~~ 668 (670)
|.|+||. +|+|++.|++++
T Consensus 465 --g~evLT~a~pKei~~ie~l~ 484 (488)
T KOG2414|consen 465 --GPEVLTAACPKEIIEIERLM 484 (488)
T ss_pred --CceeehhcccCCHHHHHHHH
Confidence 7899996 999999999875
No 14
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=6.5e-43 Score=359.02 Aligned_cols=221 Identities=19% Similarity=0.221 Sum_probs=198.1
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCCCcc
Q 005915 411 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGANGAI 485 (670)
Q Consensus 411 ~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~-----~~f~~iv~sG~~~a~ 485 (670)
+|||++||+.||+|++++++++.++.+.+ +||+||.|+++.++... ...|... .+|++++++|.|++.
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~tE~el~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~n~~~ 74 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREV------KPGVSTKELDRIAKDFI-EKHGAKPAFLGYYGFPGSVCISVNEVV 74 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHH-HHCCCCccccCCCCCCceeEeccccEE
Confidence 68999999999999999999999888766 99999999999998754 3455432 357788899999999
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHH
Q 005915 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (670)
Q Consensus 486 ~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~ 565 (670)
+|+.|++ ++|++||+|++|+|+.|+||++|++|||++|+|+++|+++|++++++++++++++|| |+++++|+++++
T Consensus 75 ~H~~~~~---~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~~~~ 150 (247)
T TIGR00500 75 IHGIPDK---KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKP-GNRIGEIGAAIQ 150 (247)
T ss_pred EecCCCC---cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHH
Confidence 9999986 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CccCcccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeeec-----------------CcceE
Q 005915 566 SSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYED-----------------HAFGI 626 (670)
Q Consensus 566 ~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~~-----------------~~~Gv 626 (670)
+++.+.|+. +.|.+||||| +++||.|.+.+. .++++.+|++||||++||++|.+ +.+|+
T Consensus 151 ~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ 228 (247)
T TIGR00500 151 KYAEAKGFSVVREYCGHGIG--RKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSA 228 (247)
T ss_pred HHHHHcCCEeccCccCCccC--cccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEE
Confidence 999999995 6788999999 999999963322 13468999999999999999973 46799
Q ss_pred EEEEEEEEecCCCCCCCCCccccceeEccC
Q 005915 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (670)
Q Consensus 627 riED~v~Vte~g~~~~~~~~~~lG~E~LT~ 656 (670)
|+||+|+||++ |+|.||.
T Consensus 229 ried~v~Vt~~------------G~e~Lt~ 246 (247)
T TIGR00500 229 QFEHTIVITDN------------GPEILTE 246 (247)
T ss_pred EEeEEEEEcCC------------ccEEccC
Confidence 99999999999 8999984
No 15
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=7.7e-43 Score=359.54 Aligned_cols=227 Identities=22% Similarity=0.219 Sum_probs=203.6
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCC-----CCCCceeEeeCCCC
Q 005915 409 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGANG 483 (670)
Q Consensus 409 lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~-----~~~f~~iv~sG~~~ 483 (670)
+-+|||++||+.||+|+++++.++.++++.+ +||+||.|+++.+..... ..|.. ..+|++++++|.|+
T Consensus 2 ~~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i------~pG~se~ela~~~~~~~~-~~G~~~~~~~~~~~~~~~~~g~~~ 74 (252)
T PRK05716 2 AITIKTPEEIEKMRVAGRLAAEVLDEIEPHV------KPGVTTKELDRIAEEYIR-DQGAIPAPLGYHGFPKSICTSVNE 74 (252)
T ss_pred ceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHH-HCCCEecccCCCCCCcCeEecccc
Confidence 3479999999999999999999999888777 999999999999877543 34542 24677788899999
Q ss_pred ccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHH
Q 005915 484 AIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAF 563 (670)
Q Consensus 484 a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~ 563 (670)
..+|+.|++ ++|++||+|++|+|+.|+||++|++||+++|+|+++|+++|++++++++++++++|| |++++||+++
T Consensus 75 ~~~h~~~~~---~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~dv~~~ 150 (252)
T PRK05716 75 VVCHGIPSD---KVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKP-GARLGDIGHA 150 (252)
T ss_pred eeecCCCCC---cccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHH
Confidence 999999876 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCCC-CccCcccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeee-----------------cCcc
Q 005915 564 ARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYE-----------------DHAF 624 (670)
Q Consensus 564 a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~-----------------~~~~ 624 (670)
+++.+++.|+. ..|++||||| +.+||.|.+.++ .++++.+|+|||||++||++|. ++.+
T Consensus 151 ~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~ 228 (252)
T PRK05716 151 IQKYAEAEGFSVVREYCGHGIG--RKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSL 228 (252)
T ss_pred HHHHHHHcCCeeecCccccccC--CccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCc
Confidence 99999999995 5688999999 999999974332 3457899999999999999986 5678
Q ss_pred eEEEEEEEEEecCCCCCCCCCccccceeEccCCCcc
Q 005915 625 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 660 (670)
Q Consensus 625 GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~ 660 (670)
|+|+||+|+||++ |+|.||..|++
T Consensus 229 g~~~ed~v~Vt~~------------G~e~Lt~~~~~ 252 (252)
T PRK05716 229 SAQYEHTVAVTED------------GPEILTLRPEE 252 (252)
T ss_pred EEeeeeEEEEcCC------------ccEEeeCCCCC
Confidence 9999999999999 89999999875
No 16
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=3.3e-42 Score=347.33 Aligned_cols=216 Identities=58% Similarity=0.945 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC--cCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCccc
Q 005915 421 MLNSHLRDAAALAQFWVWLEEEIHNGAK--LTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVV 498 (670)
Q Consensus 421 ~R~A~~i~~~a~~~~~~~l~~~i~~~~G--~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~i 498 (670)
||.|+..+..++.++++++.+.+ +|| +||.||++.+++++....++.+.+|++++++|+|++.+|+.|++.++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~i--~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~~~~H~~p~~~~~r~l 79 (224)
T cd01085 2 MRAAHIRDGVALVEFLAWLEQEV--PKGETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNGAIVHYSPTEESNRKI 79 (224)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHh--ccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCccCcCCCCcCcccCccc
Confidence 67777777777777888888877 999 99999999998765444445567899999999999999999983334899
Q ss_pred CCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhC-CCCCChhHHHHHHHHHHHHcCCCCcc
Q 005915 499 DSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIF-PQSTPGFVLDAFARSSLWKIGLDYRH 577 (670)
Q Consensus 499 ~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~-P~G~~~~ev~~~a~~~l~~~G~~~~h 577 (670)
++||+|++|+|+.|+||++|++|||++|+|+++|+++|+.++++++++++.++ | |+++.+|++++++.+.+.|+.|.|
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~v~~~~~~~~~~~g~~~~h 158 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPK-GTTGSQLDALARQPLWKAGLDYGH 158 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999998885 6 999999999999999999999999
Q ss_pred CcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecCCCC
Q 005915 578 GTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTP 640 (670)
Q Consensus 578 ~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~g~~ 640 (670)
++|||||.+|++||.|.++ ..++++.+|++||||+|||++|.++.+|+|+||+|+||++|++
T Consensus 159 ~~GHgIG~~l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~g~~gvried~v~Vt~~G~~ 220 (224)
T cd01085 159 GTGHGVGSFLNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKEGKYGIRIENLVLVVEAETT 220 (224)
T ss_pred CCCCCCCCCCcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeCCCeEEEeeEEEEEeeCCcC
Confidence 9999999555889999844 1245778999999999999999999999999999999999765
No 17
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=6.3e-42 Score=346.75 Aligned_cols=214 Identities=20% Similarity=0.066 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCC------ceeEeeCCCCccccccCC
Q 005915 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSF------DTISGSGANGAIIHYKPE 491 (670)
Q Consensus 418 Ie~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f------~~iv~sG~~~a~~h~~p~ 491 (670)
|+.||+|+++++.++.++++.+ +||+||.||++.+..... ..|+...++ .+++++|+|++.+|+.|+
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i------~pG~tE~ei~a~~~~~~~-~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~ 73 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAI------REGVPEYEVALAGTQAMV-REIAKTFPEVELMDTWTWFQSGINTDGAHNPVT 73 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHHHH-HcCCccCCcccccCcceEEEeeccccccCCCCC
Confidence 6899999999999999888777 999999999999876543 345433222 268899999999999887
Q ss_pred CCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHc
Q 005915 492 PGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI 571 (670)
Q Consensus 492 ~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~ 571 (670)
+ ++|++||+|++|+|+.|+||++|++|||++|+|+++|+++|+++.++++++++++|| |+++++|+++++++++++
T Consensus 74 ~---r~l~~GD~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rp-G~~~~~v~~a~~~~~~~~ 149 (228)
T cd01090 74 N---RKVQRGDILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKP-GARCKDIAAELNEMYREH 149 (228)
T ss_pred C---cccCCCCEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHc
Confidence 6 899999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CCC--CccCcccccccCCccccCCCcc--cccCCCCccccCCCEEEECceeeec----CcceEEEEEEEEEecCCCCCCC
Q 005915 572 GLD--YRHGTGHGVGAALNVHEGPQSI--SFRYGNMTPLVEGMIVSNEPGYYED----HAFGIRIENLLYVKEVGTPNRF 643 (670)
Q Consensus 572 G~~--~~h~~GHgiG~~l~~hE~P~~i--~~~~~~~~~L~~GMV~siEPgiy~~----~~~GvriED~v~Vte~g~~~~~ 643 (670)
|+. +.|++||||| +.+||.|... ....+++.+|+|||||++||++|.+ +.+|+|+||+|+||++
T Consensus 150 G~~~~~~~~~GHgiG--l~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~~------ 221 (228)
T cd01090 150 DLLRYRTFGYGHSFG--VLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGQPGAGGYREHDILVINEN------ 221 (228)
T ss_pred CCCcccccccCcccc--cccccCCCccccccCCCCCCccCCCCEEEECCEEeecccCCCCcEEEeeeEEEECCC------
Confidence 983 6899999999 9999987421 2223567999999999999999984 7899999999999999
Q ss_pred CCccccceeEccC
Q 005915 644 GGVSYLGFEKLTF 656 (670)
Q Consensus 644 ~~~~~lG~E~LT~ 656 (670)
|+|.||.
T Consensus 222 ------G~e~Lt~ 228 (228)
T cd01090 222 ------GAENITG 228 (228)
T ss_pred ------ccccCcC
Confidence 8899983
No 18
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=9.3e-42 Score=352.08 Aligned_cols=224 Identities=22% Similarity=0.161 Sum_probs=200.5
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCC-----CCCCceeEeeCCC
Q 005915 408 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGAN 482 (670)
Q Consensus 408 ~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~-----~~~f~~iv~sG~~ 482 (670)
++++|||++||+.||+|+++++.++.++++.+ +||+||.|+++.+.... ...|.. ...|++++++|.|
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i------~pG~te~el~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~n 78 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAV------EPGMTTKELDRIAEKRL-EEHGAIPSPEGYYGFPGSTCISVN 78 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhc------cCCCCHHHHHHHHHHHH-HHCCCEeCcccCCCCCcceEecCC
Confidence 35689999999999999999999999888776 99999999999998754 345543 2457778888999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHH
Q 005915 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (670)
Q Consensus 483 ~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~ 562 (670)
...+|+.|++ ++|++||+|++|+|+.|+||++|++|||++|+|+++++++|++++++++++++++|| |+++++|++
T Consensus 79 ~~~~h~~p~~---~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~ 154 (255)
T PRK12896 79 EEVAHGIPGP---RVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKA-GRPLNDIGR 154 (255)
T ss_pred CeeEecCCCC---ccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence 9999999876 899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CccCcccccccCCccccCCCcccc--cCCCCccccCCCEEEECceee-----------------ecC
Q 005915 563 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF--RYGNMTPLVEGMIVSNEPGYY-----------------EDH 622 (670)
Q Consensus 563 ~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~--~~~~~~~L~~GMV~siEPgiy-----------------~~~ 622 (670)
++++++.+.|+. +.|.+||||| +.+||.|..+.. .++++.+|++||||+|||++| .++
T Consensus 155 ~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~ 232 (255)
T PRK12896 155 AIEDFAKKNGYSVVRDLTGHGVG--RSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDK 232 (255)
T ss_pred HHHHHHHHcCCEeccCcccCCcC--cccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCC
Confidence 999999999994 6789999999 999999964432 245688999999999999998 367
Q ss_pred cceEEEEEEEEEecCCCCCCCCCccccceeEccC
Q 005915 623 AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (670)
Q Consensus 623 ~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~ 656 (670)
.+|+|+||||+||++ |+|.||.
T Consensus 233 ~~~~~~edtv~vt~~------------G~e~Lt~ 254 (255)
T PRK12896 233 SLSAQFEHTVVVTRD------------GPEILTD 254 (255)
T ss_pred CeEEEEEEEEEEcCC------------cceecCC
Confidence 789999999999999 8999985
No 19
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2.4e-41 Score=364.15 Aligned_cols=233 Identities=17% Similarity=0.171 Sum_probs=204.9
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCceeEee
Q 005915 405 PIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGS 479 (670)
Q Consensus 405 ~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~-----~~f~~iv~s 479 (670)
.++..|+|||++||+.||+|++++.++++.+.+.+ +||+||.||++.++....+ .|+.. ..|+.++++
T Consensus 130 ~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~i------rpGvTe~EI~~~v~~~~~~-~Ga~ps~l~y~~fp~svct 202 (396)
T PLN03158 130 DLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAI------KPGVTTDEIDRVVHEATIA-AGGYPSPLNYHFFPKSCCT 202 (396)
T ss_pred ccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHH-cCCccccccccCCCceeee
Confidence 35678999999999999999999999999988777 9999999999999876544 34322 357888999
Q ss_pred CCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhH
Q 005915 480 GANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFV 559 (670)
Q Consensus 480 G~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~e 559 (670)
|.|..++|+.|++ ++|++||+|.+|+|+.|+||++|++|||++|+++++++++|+++.++++++++++|| |++++|
T Consensus 203 s~N~~i~Hgip~~---r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~~~eal~~aI~~vkP-Gv~~~d 278 (396)
T PLN03158 203 SVNEVICHGIPDA---RKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTYECLEKAIAIVKP-GVRYRE 278 (396)
T ss_pred cccccccCCCCCC---ccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCCHHH
Confidence 9999999999976 899999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHcCCC-CccCcccccccCCccccCCCcccccC-CCCccccCCCEEEECceeee-----------------
Q 005915 560 LDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRY-GNMTPLVEGMIVSNEPGYYE----------------- 620 (670)
Q Consensus 560 v~~~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~~~-~~~~~L~~GMV~siEPgiy~----------------- 620 (670)
|++++++++.+.|+. +.|.+||||| +.+||.|.+..+.. ....+|+|||||+|||++|.
T Consensus 279 I~~~i~~~~~~~G~~~v~~~~GHGIG--~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t~ 356 (396)
T PLN03158 279 VGEVINRHATMSGLSVVKSYCGHGIG--ELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVTA 356 (396)
T ss_pred HHHHHHHHHHHcCCCccCCccCCccc--cccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcccceecCCCceEEec
Confidence 999999999999996 6788999999 99999998432211 13479999999999999984
Q ss_pred cCcceEEEEEEEEEecCCCCCCCCCccccceeEccC-CCcchh
Q 005915 621 DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQVC 662 (670)
Q Consensus 621 ~~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~-~P~~~~ 662 (670)
+|.+|+|+||+|+||++ |+|.||. .|....
T Consensus 357 dG~~~aq~E~tvlVTe~------------G~EiLT~~~~~~~~ 387 (396)
T PLN03158 357 DGKRSAQFEHTLLVTET------------GVEVLTARLPSSPD 387 (396)
T ss_pred CCceeeEeeeEEEEeCC------------cceECCCCCCCCcc
Confidence 34457899999999999 9999997 666544
No 20
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=2e-41 Score=347.05 Aligned_cols=212 Identities=29% Similarity=0.320 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcc
Q 005915 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (670)
Q Consensus 418 Ie~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~ 497 (670)
|+.||+|++++++++.++.+.+ +||+||.|+++.++.... ..|.. .+|++++++|+|++.+|+.|++ ++
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i------~pG~tE~ei~~~~~~~~~-~~G~~-~~~~~~v~~g~~~~~~H~~~~~---~~ 69 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKAS------RPGMSEYELEAEFEYEFR-SRGAR-LAYSYIVAAGSNAAILHYVHND---QP 69 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCcHHHHHHHHHHHHH-HcCCC-cCCCCeEEECCCccccCCCcCC---Cc
Confidence 6899999999999999888777 999999999999987644 45655 6788999999999999999875 89
Q ss_pred cCCCCeEEEecceeECCeecceEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCC---
Q 005915 498 VDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--- 573 (670)
Q Consensus 498 i~~Gd~v~iD~g~~~~gY~sD~tRT~~v-G~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~--- 573 (670)
|++||+|++|+|+.|+||++|++|||++ |+|+++++++|++++++++++++++|| |++++||++++++++++.|+
T Consensus 70 l~~Gd~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~~~~v~~a~~~~~~~~~~~~g 148 (243)
T cd01087 70 LKDGDLVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKP-GVSYEDIHLLAHRVLAEGLKELG 148 (243)
T ss_pred CCCCCEEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999 689999999999999999999999999 99999999999999976531
Q ss_pred -----------------CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecC----------cceE
Q 005915 574 -----------------DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDH----------AFGI 626 (670)
Q Consensus 574 -----------------~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~----------~~Gv 626 (670)
.+.|++||||| +++||.|.++ ..++++.+|++||||++||++|.++ .+|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~h~~GhgiG--l~~~e~p~~~-~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~ 225 (243)
T cd01087 149 ILKGDVDEIVESGAYAKFFPHGLGHYLG--LDVHDVGGYL-RYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGI 225 (243)
T ss_pred cccCchHhhhhhhhhhhhcCCCCccccC--cccccCcccc-ccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEE
Confidence 46899999999 9999999731 1245789999999999999999987 7899
Q ss_pred EEEEEEEEecCCCCCCCCCccccceeEccC
Q 005915 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (670)
Q Consensus 627 riED~v~Vte~g~~~~~~~~~~lG~E~LT~ 656 (670)
|+||+|+||++ |+|.||.
T Consensus 226 ~ied~v~Vt~~------------G~e~Lt~ 243 (243)
T cd01087 226 RIEDDVLVTED------------GPENLTR 243 (243)
T ss_pred EeeeEEEEcCC------------cceeCcC
Confidence 99999999999 8999984
No 21
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=2.6e-41 Score=342.76 Aligned_cols=242 Identities=29% Similarity=0.364 Sum_probs=212.1
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCC
Q 005915 404 SPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANG 483 (670)
Q Consensus 404 ~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~ 483 (670)
+.+.+.|.|||+.||+.||.|++|+..|+.++++.+ +||+.|+++...++...-..+|.+..+|.+|++||+|+
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~------~pg~~Eyq~eslF~hh~y~~GGcRh~sYtcIc~sG~ns 250 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAV------RPGMKEYQLESLFLHHSYSYGGCRHLSYTCICASGDNS 250 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhC------CchHhHHhHHHHHHHhhhccCCccccccceeeecCCCc
Confidence 457889999999999999999999999999999988 99999999999998654455777889999999999999
Q ss_pred ccccc----cCCCCCCcccCCCCeEEEecceeECCeecceEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChh
Q 005915 484 AIIHY----KPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFPQSTPGF 558 (670)
Q Consensus 484 a~~h~----~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~v-G~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ 558 (670)
++.|| .|++ +.|+.||+.++|+|+.|.+|.+|+|++|.. |+.+++|+.+|++|+.++.++++++|| |+.+.
T Consensus 251 ~vLHYgha~apNd---~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~Kp-Gv~W~ 326 (492)
T KOG2737|consen 251 AVLHYGHAGAPND---RTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKP-GVWWV 326 (492)
T ss_pred ceeeccccCCCCC---cccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCC-CCccc
Confidence 99999 5654 999999999999999999999999999998 899999999999999999999999999 99999
Q ss_pred HHHHHHHHHH----HHcCC----------------CCccCcccccccCCccccCCCcc-c-ccC---C-----CCccccC
Q 005915 559 VLDAFARSSL----WKIGL----------------DYRHGTGHGVGAALNVHEGPQSI-S-FRY---G-----NMTPLVE 608 (670)
Q Consensus 559 ev~~~a~~~l----~~~G~----------------~~~h~~GHgiG~~l~~hE~P~~i-~-~~~---~-----~~~~L~~ 608 (670)
|++..+.+++ .+.|+ .++|++||-+| |++|+---.. + .+| + ..+.|++
T Consensus 327 Dmh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lG--lDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e 404 (492)
T KOG2737|consen 327 DMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLG--LDVHDVGGYPEGVERPDEPGLRSLRTARHLKE 404 (492)
T ss_pred cHHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeecccccccccc--ccccccCCCCCCCCCCCcchhhhhhhhhhhhc
Confidence 9998876554 44554 37899999999 9999821101 1 111 1 4578999
Q ss_pred CCEEEECceeeec--------------------------CcceEEEEEEEEEecCCCCCCCCCccccceeEccCCCcchh
Q 005915 609 GMIVSNEPGYYED--------------------------HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVC 662 (670)
Q Consensus 609 GMV~siEPgiy~~--------------------------~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~ 662 (670)
|||+++|||.|+- +.||+||||.|+||++ |+|+||.+|++..
T Consensus 405 ~MviTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~------------G~enlt~vprtve 472 (492)
T KOG2737|consen 405 GMVITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKS------------GIENLTCVPRTVE 472 (492)
T ss_pred CcEEEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEecc------------ccccccCCCCCHH
Confidence 9999999999941 5789999999999999 9999999999999
Q ss_pred Hhhhhhc
Q 005915 663 HENRIAY 669 (670)
Q Consensus 663 ~i~~~~~ 669 (670)
.|+.++=
T Consensus 473 eIEa~ma 479 (492)
T KOG2737|consen 473 EIEACMA 479 (492)
T ss_pred HHHHHHh
Confidence 9998764
No 22
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=4.3e-39 Score=321.66 Aligned_cols=205 Identities=37% Similarity=0.502 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcc
Q 005915 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (670)
Q Consensus 418 Ie~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~ 497 (670)
|+.||+|+++++.++.++.+.+ +||+||.|+++.++... ...|..+.+|++++++|+|+..+|+.|++ ++
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~-~~~g~~~~~~~~~v~~g~~~~~~h~~~~~---~~ 70 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFI------KPGMTEREVAAELEYFM-RKLGAEGPSFDTIVASGPNSALPHGVPSD---RK 70 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHH-HHcCCCCCCCCcEEEECccccccCCCCCC---cC
Confidence 6799999999999999887766 99999999999998764 45677778999999999999999999876 89
Q ss_pred cCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCC--CC
Q 005915 498 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DY 575 (670)
Q Consensus 498 i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~--~~ 575 (670)
|++||+|.+|+|++|+||++|++||+++|+|+++++++|+.+.++++++++++|| |++++||++++++++++.|+ ++
T Consensus 71 l~~gd~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~di~~~~~~~~~~~g~~~~~ 149 (208)
T cd01092 71 IEEGDLVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKP-GVTAKEVDKAARDVIEEAGYGEYF 149 (208)
T ss_pred cCCCCEEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCccccC
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999998 58
Q ss_pred ccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecCC
Q 005915 576 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVG 638 (670)
Q Consensus 576 ~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~g 638 (670)
.|++||+|| +..||.|. +. ++++.+|++||||+|||++|.++.+|+|+||+|+||++|
T Consensus 150 ~~~~Gh~iG--~~~~e~p~-i~--~~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~~g 207 (208)
T cd01092 150 IHRTGHGVG--LEVHEAPY-IS--PGSDDVLEEGMVFTIEPGIYIPGKGGVRIEDDVLVTEDG 207 (208)
T ss_pred CCCCccccC--cccCcCCC-cC--CCCCCCcCCCCEEEECCeEEecCCCEEEeeeEEEECCCC
Confidence 899999999 99999997 54 457899999999999999999999999999999999984
No 23
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=5.8e-39 Score=327.89 Aligned_cols=214 Identities=23% Similarity=0.234 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCCCccccccCCC
Q 005915 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGANGAIIHYKPEP 492 (670)
Q Consensus 418 Ie~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~-----~~f~~iv~sG~~~a~~h~~p~~ 492 (670)
|+.||+|+++++.+++++++.+ +||+||.|+++.+..... ..|... ..|+..+.+|.|++.+|+.|++
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~------~pG~tE~ev~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 73 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAI------KPGVTTKELDQIAHEFIE-EHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDD 73 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHH-HcCCCcccccCCCCCcceecCCCCceeCCCCCC
Confidence 6899999999999999888777 999999999999987543 445432 3466778889999999999876
Q ss_pred CCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcC
Q 005915 493 GKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIG 572 (670)
Q Consensus 493 ~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G 572 (670)
++|++||+|++|+|+.|+||++|++|||++|+|+++|+++|+.++++++++++++|| |++++||++++++++++.|
T Consensus 74 ---~~l~~Gd~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~G 149 (238)
T cd01086 74 ---RVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKP-GNRIGDIGHAIEKYAEKNG 149 (238)
T ss_pred ---cccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CC-CccCcccccccCCccccCCCccc-ccCCCCccccCCCEEEECceeee-----------------cCcceEEEEEEEE
Q 005915 573 LD-YRHGTGHGVGAALNVHEGPQSIS-FRYGNMTPLVEGMIVSNEPGYYE-----------------DHAFGIRIENLLY 633 (670)
Q Consensus 573 ~~-~~h~~GHgiG~~l~~hE~P~~i~-~~~~~~~~L~~GMV~siEPgiy~-----------------~~~~GvriED~v~ 633 (670)
+. +.|.+||||| +.+||.|.... ..++++.+|++||||++||++|. ++.+|+|+||+|+
T Consensus 150 ~~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~ 227 (238)
T cd01086 150 YSVVREFGGHGIG--RKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVL 227 (238)
T ss_pred cceecCccccCCC--CccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEE
Confidence 95 5788999999 99999997441 22457899999999999999996 5678999999999
Q ss_pred EecCCCCCCCCCccccceeEccC
Q 005915 634 VKEVGTPNRFGGVSYLGFEKLTF 656 (670)
Q Consensus 634 Vte~g~~~~~~~~~~lG~E~LT~ 656 (670)
||++ |+|.||.
T Consensus 228 Vte~------------G~e~Lt~ 238 (238)
T cd01086 228 ITED------------GPEILTL 238 (238)
T ss_pred EcCC------------cceeCCC
Confidence 9999 8999984
No 24
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=5e-39 Score=327.71 Aligned_cols=215 Identities=19% Similarity=0.217 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCC--cCHHHHHHHHHHHHHhhCCCC---------CCCCceeEeeCCCC-c
Q 005915 418 LEGMLNSHLRDAAALAQF-WVWLEEEIHNGAK--LTEVDVADKLLEFRSKQSGFL---------DTSFDTISGSGANG-A 484 (670)
Q Consensus 418 Ie~~R~A~~i~~~a~~~~-~~~l~~~i~~~~G--~TE~eia~~~~~~~~~~~G~~---------~~~f~~iv~sG~~~-a 484 (670)
++.+|+|++++..+|..+ ...+++.+ .+| +|+.+++..++..+. ..+.. +++|++|++||+|+ .
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~i--d~~~~~t~~~l~~~~e~~~~-~~~~~~~~~~~~~~~~~y~~iv~sG~~~~~ 77 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEII--DQEKKVTHSKLSDKVEKAIE-DKKKYKAKLDPEQLDWCYPPIIQSGGNYDL 77 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHH--hccccccHHHHHHHHHHHHh-CchhhhcCCCHHHcCcccCCeEeECcCccc
Confidence 468999999999999755 45777777 556 999999999998643 34433 68999999999999 8
Q ss_pred cccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHH
Q 005915 485 IIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 564 (670)
Q Consensus 485 ~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a 564 (670)
++|+.+++ +.+..|++|++|+|+.|+|||+|+||||++| |+++|+++|++++++++++++++|| |+++++|++++
T Consensus 78 l~h~~~s~---~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkp-G~~~~dv~~~a 152 (243)
T cd01091 78 LKSSSSSD---KLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKP-GAKLSDVYQKT 152 (243)
T ss_pred CCCCCCCc---cccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHH
Confidence 99998875 8899999999999999999999999999998 7999999999999999999999999 99999999999
Q ss_pred HHHHHHcCC----CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceee-ecC---------cceEEEEE
Q 005915 565 RSSLWKIGL----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY-EDH---------AFGIRIEN 630 (670)
Q Consensus 565 ~~~l~~~G~----~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy-~~~---------~~GvriED 630 (670)
++++++.|. .|.|++||||| |++||.|..++ ++++.+|++||||++|||+| .++ .+|+||||
T Consensus 153 ~~~i~~~~~~~~~~~~~~~GHgiG--le~hE~~~~l~--~~~~~~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieD 228 (243)
T cd01091 153 LDYIKKKKPELEPNFTKNLGFGIG--LEFRESSLIIN--AKNDRKLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSD 228 (243)
T ss_pred HHHHHHhChhHHHhCcCCcccccC--cccccCccccC--CCCCCCcCCCCEEEEeCCcccccCccccCccCCeeEEEEEE
Confidence 999999873 47899999999 99999886454 45789999999999999999 443 68999999
Q ss_pred EEEEecCCCCCCCCCccccce-eEccC
Q 005915 631 LLYVKEVGTPNRFGGVSYLGF-EKLTF 656 (670)
Q Consensus 631 ~v~Vte~g~~~~~~~~~~lG~-E~LT~ 656 (670)
+|+||++ |+ |.||.
T Consensus 229 tV~Vt~~------------G~~~~LT~ 243 (243)
T cd01091 229 TILVTED------------EPAIVLTN 243 (243)
T ss_pred EEEEcCC------------CCceecCC
Confidence 9999999 77 88884
No 25
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.9e-37 Score=309.81 Aligned_cols=203 Identities=31% Similarity=0.460 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCccc
Q 005915 419 EGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVV 498 (670)
Q Consensus 419 e~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~i 498 (670)
|.||+|++++++++.++++.+ +||+||.|+++.+...+....|....+|++++++|+|+..+|+.|++ ++|
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~---~~l 71 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEAL------RPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYTPTD---RRL 71 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------STTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTBCCS---SBE
T ss_pred CHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceecceeccc---eee
Confidence 689999999999999998887 99999999999999864456677788999999999999999998865 899
Q ss_pred CCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCC--CCc
Q 005915 499 DSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DYR 576 (670)
Q Consensus 499 ~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~--~~~ 576 (670)
++||+|.+|+|++|+||++|++||+++| |+++|+++|+.++++++++++++|| |++++||++++++.+.+.|+ .+.
T Consensus 72 ~~gd~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~~~~~~ 149 (207)
T PF00557_consen 72 QEGDIVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRP-GVTGSDVYEAVREVLEEYGLEEPYP 149 (207)
T ss_dssp STTEEEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-ST-TSBHHHHHHHHHHHHHHTTEGEEBT
T ss_pred ecCCcceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhccc-ccccchhhHHHHHHHHhhcccceee
Confidence 9999999999999999999999999999 9999999999999999999999999 99999999999999999998 588
Q ss_pred cCcccccccCCccccC-CCcccccCCCCccccCCCEEEECceee-ecCcceEEEEEEEEEec
Q 005915 577 HGTGHGVGAALNVHEG-PQSISFRYGNMTPLVEGMIVSNEPGYY-EDHAFGIRIENLLYVKE 636 (670)
Q Consensus 577 h~~GHgiG~~l~~hE~-P~~i~~~~~~~~~L~~GMV~siEPgiy-~~~~~GvriED~v~Vte 636 (670)
|.+||||| +++||. |+ +. +.+++.+|++||||++||+++ .++++|+++||+|+|||
T Consensus 150 ~~~GH~iG--~~~~~~~P~-i~-~~~~~~~l~~gmv~~iep~~~~~~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 150 HGLGHGIG--LEFHEPGPN-IA-RPGDDTVLEPGMVFAIEPGLYFIPGWGGVRFEDTVLVTE 207 (207)
T ss_dssp SSSEEEES--SSSSEEEEE-ES-STTTSSB--TTBEEEEEEEEEEETTSEEEEEBEEEEEES
T ss_pred eccccccc--cccccccee-ee-cccccceecCCCceeEeeeEEccCCCcEEEEEEEEEECc
Confidence 99999999 999997 97 43 135889999999999999999 67889999999999996
No 26
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=2.5e-35 Score=292.73 Aligned_cols=204 Identities=33% Similarity=0.469 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcc
Q 005915 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (670)
Q Consensus 418 Ie~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~ 497 (670)
|+.||+|+++++.++..+++.+ +||+||.|+++.+..... ..|. ..++++++++|+++..+|+.|++ ++
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~~-~~g~-~~~~~~~v~~g~~~~~~h~~~~~---~~ 69 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAI------RPGVTEAEVAAAIEQALR-AAGG-YPAGPTIVGSGARTALPHYRPDD---RR 69 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHHH-HcCC-CCCCCcEEEECccccCcCCCCCC---CC
Confidence 5789999999999999988777 999999999999987643 4555 67788999999999999999875 89
Q ss_pred cCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCC--CC
Q 005915 498 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DY 575 (670)
Q Consensus 498 i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~--~~ 575 (670)
+++||+|++|+|+.|+||++|++||+++|+|+++++++|+.+.++++++++.++| |+++.|+++++++.+++.|+ .+
T Consensus 70 i~~gd~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~p-G~~~~ei~~~~~~~~~~~g~~~~~ 148 (207)
T cd01066 70 LQEGDLVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRP-GVTAEEVDAAAREVLEEHGLGPNF 148 (207)
T ss_pred cCCCCEEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCccccC
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999998 48
Q ss_pred ccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecCC
Q 005915 576 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVG 638 (670)
Q Consensus 576 ~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~g 638 (670)
.|++||+|| +..||.|. +. ++++.+|++||||++||++|.++.+|+++||+|+||++|
T Consensus 149 ~~~~Gh~iG--~~~~e~~~-~~--~~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~~g 206 (207)
T cd01066 149 GHRTGHGIG--LEIHEPPV-LK--AGDDTVLEPGMVFAVEPGLYLPGGGGVRIEDTVLVTEDG 206 (207)
T ss_pred CCCCccccC--cccCCCCC-cC--CCCCCCcCCCCEEEECCEEEECCCcEEEeeeEEEEeCCC
Confidence 899999999 99999997 43 457889999999999999999988999999999999984
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=4.9e-35 Score=296.82 Aligned_cols=208 Identities=12% Similarity=0.092 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHh---------hCCCCCCCCceeEeeCCCCccccc
Q 005915 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---------QSGFLDTSFDTISGSGANGAIIHY 488 (670)
Q Consensus 418 Ie~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~---------~~G~~~~~f~~iv~sG~~~a~~h~ 488 (670)
++.||+|+++++.++.++.+.+ +||+||.|++..++..+.. ..|..+.+|+++++ .|++.+|+
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i------~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~ 72 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLC------VPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHF 72 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecC
Confidence 4689999999999999988777 9999999998776554332 15566788888876 47889999
Q ss_pred cCCC-CCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCH-----HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHH
Q 005915 489 KPEP-GKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTA-----REKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (670)
Q Consensus 489 ~p~~-~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~-----e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~ 562 (670)
.|.+ .++++|++||+|++|+|+.|+||++|+||||++|+|++ +++++|++++++++++++++|| |++++||++
T Consensus 73 ~p~~~~~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kp-G~~~~dv~~ 151 (228)
T cd01089 73 SPLKSDATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRP-GNQNSDITE 151 (228)
T ss_pred CCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHH
Confidence 9753 24589999999999999999999999999999999874 8999999999999999999999 999999999
Q ss_pred HHHHHHHHcCC-----CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecC
Q 005915 563 FARSSLWKIGL-----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (670)
Q Consensus 563 ~a~~~l~~~G~-----~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~ 637 (670)
++++++.+.|+ .+.|++||+ +..++++.. -..+|++||||++||+++.++.+|+++||||+||++
T Consensus 152 a~~~~~~~~G~~~~~~~~~h~~g~~----~~~~~~~~~------~~~~l~~gmvf~~ep~~~~~g~~~~~~~~Tv~vt~~ 221 (228)
T cd01089 152 AIQKVIVDYGCTPVEGVLSHQLKRV----VSSGEGKAK------LVECVKHGLLFPYPVLYEKEGEVVAQFKLTVLLTPN 221 (228)
T ss_pred HHHHHHHHcCCEEecCccccCcCce----EecCCCCcc------chhhccCCcccccceeEccCCCeEEEEEEEEEEcCC
Confidence 99999999996 245666664 446665521 257899999999999999999999999999999999
Q ss_pred CCCCCCCCccccceeEccC
Q 005915 638 GTPNRFGGVSYLGFEKLTF 656 (670)
Q Consensus 638 g~~~~~~~~~~lG~E~LT~ 656 (670)
|+|.||.
T Consensus 222 ------------G~e~lt~ 228 (228)
T cd01089 222 ------------GVTVLTG 228 (228)
T ss_pred ------------CCeeCCC
Confidence 8899983
No 28
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.9e-32 Score=270.07 Aligned_cols=222 Identities=24% Similarity=0.275 Sum_probs=191.7
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHh------hCCCCCCCCceeEeeCCCCcc
Q 005915 412 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK------QSGFLDTSFDTISGSGANGAI 485 (670)
Q Consensus 412 vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~------~~G~~~~~f~~iv~sG~~~a~ 485 (670)
+|+++||+.||+|++++..++..+...+ +||+|-.||....+++... ..|..+ |+--++..-|...
T Consensus 5 ikt~~eiek~r~Ag~i~a~~l~~~~~~v------~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g--~~~~~ciSvNe~v 76 (255)
T COG0024 5 IKTPEEIEKMREAGKIAAKALKEVASLV------KPGVTTLELDEIAEEFIREKGAYPAFLGYKG--FPFPTCISVNEVV 76 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHc------CCCCCHHHHHHHHHHHHHHcCceehhccCcC--CCcceEeehhhee
Confidence 8999999999999999999988877655 9999999999999987653 234444 4444566688889
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCC-HHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHH
Q 005915 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPT-AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 564 (670)
Q Consensus 486 ~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~-~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a 564 (670)
.||.|+ ++++|++||+|.||+|+.++||++|.++|+.||+.+ +..+++.+++.++..+++++++| |++.++|-+++
T Consensus 77 ~HgiP~--d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkp-G~~l~~Ig~aI 153 (255)
T COG0024 77 AHGIPG--DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKP-GARLGDIGRAI 153 (255)
T ss_pred eecCCC--CCcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHH
Confidence 999998 468999999999999999999999999999999755 57777999999999999999999 99999999999
Q ss_pred HHHHHHcCCC-CccCcccccccCCccccCCCcccccC-CCCccccCCCEEEECceeee------------------cCcc
Q 005915 565 RSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRY-GNMTPLVEGMIVSNEPGYYE------------------DHAF 624 (670)
Q Consensus 565 ~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~~~-~~~~~L~~GMV~siEPgiy~------------------~~~~ 624 (670)
.+++++.||. ....+||||| ...||.|++.++.. +...+|+|||||+|||.+.. ++..
T Consensus 154 q~~~~~~G~~vVr~~~GHgig--~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~ 231 (255)
T COG0024 154 QEYAESRGFSVVRNLTGHGIG--RELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSL 231 (255)
T ss_pred HHHHHHcCCEEeecccCCccC--cccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCE
Confidence 9999999995 6678999999 89999999766432 24579999999999998752 2334
Q ss_pred eEEEEEEEEEecCCCCCCCCCccccceeEccCCC
Q 005915 625 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 658 (670)
Q Consensus 625 GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P 658 (670)
..+.|.||+||++ |+|.||..+
T Consensus 232 ~aq~EHTv~Vt~~------------g~eilT~~~ 253 (255)
T COG0024 232 SAQFEHTVIVTED------------GCEILTLRP 253 (255)
T ss_pred EeEEEEEEEEeCC------------CcEEeeCCC
Confidence 6889999999999 899999865
No 29
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.97 E-value=5.6e-30 Score=268.38 Aligned_cols=193 Identities=21% Similarity=0.231 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCc
Q 005915 417 ELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCS 496 (670)
Q Consensus 417 EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~ 496 (670)
+|+.||+|++++..++..+.+.+ +||+||.|+++.++.... ..|. +++|++.++.|.+ .+||.|.+.+++
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i------~pG~se~ei~~~~~~~i~-~~g~-~~afp~~vs~n~~--~~H~~p~~~d~~ 70 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLI------KPGAKLLDVAEFVENRIR-ELGA-KPAFPCNISINEV--AAHYTPSPGDER 70 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHH-HcCC-ccCCCCEEeeCCC--ccCCCCCCCCCc
Confidence 58999999999999999887766 999999999999988654 4454 5889988887655 479999755568
Q ss_pred ccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-C
Q 005915 497 VVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-Y 575 (670)
Q Consensus 497 ~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~-~ 575 (670)
.|++||+|.+|+|++|+||++|++||+++| ++++++++++.++++++++++|| |++++||++++++++++.|+. +
T Consensus 71 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikp-G~~~~dv~~~i~~vi~~~G~~~~ 146 (291)
T PRK08671 71 VFPEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRP-GVSVGEIGRVIEETIRSYGFKPI 146 (291)
T ss_pred ccCCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccc
Confidence 899999999999999999999999999999 47899999999999999999999 999999999999999999994 6
Q ss_pred ccCcccccccCC-ccccCCCcccccCCCCccccCCCEEEECceeeecCcceE
Q 005915 576 RHGTGHGVGAAL-NVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGI 626 (670)
Q Consensus 576 ~h~~GHgiG~~l-~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~Gv 626 (670)
.|.+||||| + .+||+|.+.....+++.+|++||||+|||.+. .|.+.+
T Consensus 147 ~~~~GHgiG--~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t-~G~G~v 195 (291)
T PRK08671 147 RNLTGHGLE--RYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFAT-DGEGKV 195 (291)
T ss_pred CCCcccCcC--CCcccCCCccCccCCCCCceeCCCCEEEEcceEE-CCCCeE
Confidence 789999999 6 78999874433455789999999999999753 444433
No 30
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.97 E-value=7.6e-30 Score=276.98 Aligned_cols=196 Identities=15% Similarity=0.128 Sum_probs=169.6
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHh---hCCC-CCCCCceeEeeCCCCcc
Q 005915 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---QSGF-LDTSFDTISGSGANGAI 485 (670)
Q Consensus 410 R~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~---~~G~-~~~~f~~iv~sG~~~a~ 485 (670)
+..+|++||+.||+|++++..++..+.+.+ +||+|+.||+..++....+ ..|. .+.+|++.+ +.|.+.
T Consensus 150 ~~~~s~~EI~~~R~AaeIa~~vl~~~~~~I------kpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt~v--S~N~~a 221 (470)
T PTZ00053 150 LEKLSEEQYQDLRRAAEVHRQVRRYAQSVI------KPGVKLIDICERIESKSRELIEADGLKCGWAFPTGC--SLNHCA 221 (470)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHh------hCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCCcee--ecCccc
Confidence 344799999999999999999998887777 9999999999998864322 2344 368898865 578888
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHH
Q 005915 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (670)
Q Consensus 486 ~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~ 565 (670)
+|+.|+.+++++|+.||+|.||+|++|+||++|++||+++| ++++++++++.+|+.+++++++| |++++||+++++
T Consensus 222 aH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kp-Gv~~~dI~~AIq 297 (470)
T PTZ00053 222 AHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGI-DVRLSDIGAAIQ 297 (470)
T ss_pred cCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHH
Confidence 99999854568999999999999999999999999999998 58899999999999999999999 999999999999
Q ss_pred HHHHHcCCC----------CccCcccccccCC-ccccCCCcccccCCCCccccCCCEEEECceee
Q 005915 566 SSLWKIGLD----------YRHGTGHGVGAAL-NVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY 619 (670)
Q Consensus 566 ~~l~~~G~~----------~~h~~GHgiG~~l-~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy 619 (670)
++++++|+. +.|.+||||| + .+||+|.+.....++..+|++||||+|||.+.
T Consensus 298 evies~G~e~~Gk~f~~k~I~nltGHgIG--~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~s 360 (470)
T PTZ00053 298 EVIESYEVEIKGKTYPIKSIRNLNGHSIG--PYIIHGGKSVPIVKGGENTRMEEGELFAIETFAS 360 (470)
T ss_pred HHHHHcCCcccCcccccccccCCcccCCC--CccccCCCcCCeeCCCCCCEecCCCEEEEcceee
Confidence 999999972 3799999999 7 89997654433456788999999999999765
No 31
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.97 E-value=2.3e-29 Score=272.10 Aligned_cols=199 Identities=13% Similarity=0.051 Sum_probs=170.2
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhh---------CCCCCCCCceeEeeC
Q 005915 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQ---------SGFLDTSFDTISGSG 480 (670)
Q Consensus 410 R~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~---------~G~~~~~f~~iv~sG 480 (670)
-.+|+++||+.||+|++++..++..+.+.+ +||+|+.||+...+.++... .+..+.+|+++++
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~i------kpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS-- 82 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEAC------SPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS-- 82 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe--
Confidence 468999999999999999999999888777 99999999999877654331 2346788988776
Q ss_pred CCCccccccCCCC-CCcccCCCCeEEEecceeECCeecceEEEEEcCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCC
Q 005915 481 ANGAIIHYKPEPG-KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGE-----PTAREKECFTRVLQGHIALDQAIFPQS 554 (670)
Q Consensus 481 ~~~a~~h~~p~~~-~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~-----p~~e~~~~~~~v~~a~~a~~~~~~P~G 554 (670)
.|...+|+.|... +++.|++||+|.||+|++++||++|++||+++|+ ++++++++++++.+|+++++++++| |
T Consensus 83 vN~~v~H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkP-G 161 (389)
T TIGR00495 83 VNNCVGHFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKP-G 161 (389)
T ss_pred cCCeeeCCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 7888999999542 2478999999999999999999999999999995 4678999999999999999999999 9
Q ss_pred CChhHHHHHHHHHHHHcCCC-CccCcccccccCCcccc-CCCcccc-cC-----CCCccccCCCEEEECceee
Q 005915 555 TPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHE-GPQSISF-RY-----GNMTPLVEGMIVSNEPGYY 619 (670)
Q Consensus 555 ~~~~ev~~~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE-~P~~i~~-~~-----~~~~~L~~GMV~siEPgiy 619 (670)
++++||+.+++++++++|+. ..+.+||||| ..+|| .|.++.. .. +....|++||||+|||.+.
T Consensus 162 ~~~~dI~~ai~~v~~~~G~~~v~~~~gH~ig--r~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs 232 (389)
T TIGR00495 162 NTNTQVTEAINKVAHSYGCTPVEGMLSHQLK--QHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVS 232 (389)
T ss_pred CcHHHHHHHHHHHHHHcCCeecCCceeeccc--ceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeec
Confidence 99999999999999999995 7788999999 77888 7763322 11 2357899999999999753
No 32
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1e-29 Score=251.38 Aligned_cols=224 Identities=17% Similarity=0.149 Sum_probs=196.6
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCC----CCCCceeEeeCCCCcc
Q 005915 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL----DTSFDTISGSGANGAI 485 (670)
Q Consensus 410 R~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~----~~~f~~iv~sG~~~a~ 485 (670)
-.|.+++||+.||+|++++.+.+..+...+ +||+|..||...+++...+...+- ...||-.+++.-|..+
T Consensus 114 i~i~~~e~ie~mR~ac~LarevLd~Aa~~v------~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEvi 187 (369)
T KOG2738|consen 114 IKILDPEGIEGMRKACRLAREVLDYAATLV------RPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVI 187 (369)
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHhhhc------CCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhhee
Confidence 357899999999999999999988877666 999999999999998765543332 2467888899999999
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHH
Q 005915 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (670)
Q Consensus 486 ~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~ 565 (670)
.|+.|+. |+|++||++.||+...++||+.|+.+||++|+.+++.+++-+...++++.+++.+|| |++..+|...+.
T Consensus 188 CHGIPD~---RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kp-Gv~freiG~iI~ 263 (369)
T KOG2738|consen 188 CHGIPDS---RPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKP-GVSFREIGNIIQ 263 (369)
T ss_pred ecCCCCc---CcCCCCCEEeEEEEEEeccccCccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHHHH
Confidence 9999987 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CccCcccccccCCccccCCCcccccCC-CCccccCCCEEEECceeee-----------------cCcceE
Q 005915 566 SSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYG-NMTPLVEGMIVSNEPGYYE-----------------DHAFGI 626 (670)
Q Consensus 566 ~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~~~~-~~~~L~~GMV~siEPgiy~-----------------~~~~Gv 626 (670)
+...+.||. .+..+||||| --.|-.|.+.-+..+ ...++.+||+|+|||++.. +|....
T Consensus 264 kha~~~g~sVVr~ycGHGig--~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sA 341 (369)
T KOG2738|consen 264 KHATKNGYSVVRSYCGHGIG--RVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSA 341 (369)
T ss_pred HHhhhcCceeehhhhccccc--cccccCCCchhhcccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCceec
Confidence 999999997 6678999999 668999975444322 4579999999999999863 234468
Q ss_pred EEEEEEEEecCCCCCCCCCccccceeEccCC
Q 005915 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTFV 657 (670)
Q Consensus 627 riED~v~Vte~g~~~~~~~~~~lG~E~LT~~ 657 (670)
+.|.|++||++ |+|.||..
T Consensus 342 QFEhTlLVT~t------------G~EILT~r 360 (369)
T KOG2738|consen 342 QFEHTLLVTET------------GCEILTKR 360 (369)
T ss_pred ceeeEEEEecc------------cceehhcc
Confidence 89999999999 99999974
No 33
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.97 E-value=3.8e-29 Score=262.32 Aligned_cols=200 Identities=17% Similarity=0.130 Sum_probs=169.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCC
Q 005915 415 SAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGK 494 (670)
Q Consensus 415 ~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~ 494 (670)
-+||+.||+|++++..++..+.+.+ +||+||.|+++.++.... ..|+. ++|+++++ .|...+||.|...+
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i------~~G~se~el~~~~e~~~~-~~g~~-~aFp~~vs--~n~~~~H~~p~~~d 71 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRI------VPGVKLLEVAEFVENRIR-ELGAE-PAFPCNIS--INECAAHFTPKAGD 71 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHHH-HcCCC-CCCCccee--cCCEeeCCCCCCCc
Confidence 3789999999999999999888777 999999999999987654 45653 78998876 46677899997545
Q ss_pred CcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC
Q 005915 495 CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD 574 (670)
Q Consensus 495 ~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~ 574 (670)
++.|++||+|.+|+|++++||++|++||+++|+ .++++|+++.+|+++++++++| |++++||++++++++.+.|+.
T Consensus 72 ~~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kP-Gv~~~dV~~ai~~vi~~~G~~ 147 (295)
T TIGR00501 72 KTVFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRA-GVRVGEIGKAIQEVIESYGVK 147 (295)
T ss_pred CccCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCe
Confidence 678999999999999999999999999999995 3789999999999999999999 999999999999999999994
Q ss_pred -CccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEE
Q 005915 575 -YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIEN 630 (670)
Q Consensus 575 -~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED 630 (670)
+.|.+|||+|.+ ..|++|.+.+..++++.+|++||||+|||. +..|.|.++-++
T Consensus 148 ~i~~~~GHgig~~-~~h~g~~ip~i~~~~~~~le~GmV~aIEP~-~~~G~G~v~~~~ 202 (295)
T TIGR00501 148 PISNLTGHSMAPY-RLHGGKSIPNVKERDTTKLEEGDVVAIEPF-ATDGVGYVTDGG 202 (295)
T ss_pred eecCCCCcceecc-cccCCCccCeecCCCCCEeCCCCEEEEcee-EECCcCeEecCC
Confidence 789999999952 678876432333457789999999999995 566666555444
No 34
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.96 E-value=2.1e-28 Score=256.50 Aligned_cols=195 Identities=18% Similarity=0.150 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcc
Q 005915 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (670)
Q Consensus 418 Ie~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~ 497 (670)
++.||+|++++..++.++.+.+ +||+||.|+++.++.... ..|. +++|++.+ +.|...+||.|+..+++.
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i------~pG~te~ei~~~~~~~i~-~~G~-~~afp~~i--s~n~~~~H~~p~~~d~~~ 70 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLI------KPGMTLLEIAEFVENRIR-ELGA-GPAFPVNL--SINECAAHYTPNAGDDTV 70 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHH-HcCC-CCCCCcee--ccCCEeeCCCCCCCCCcc
Confidence 3689999999999999988777 999999999999987643 4554 57888654 567788999997656689
Q ss_pred cCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-Cc
Q 005915 498 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YR 576 (670)
Q Consensus 498 i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~-~~ 576 (670)
|++||+|.+|+|++++||++|++||+++|+ +++++|+++++|+++++++++| |++++||++++++++.+.|+. +.
T Consensus 71 l~~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikP-G~~~~dV~~ai~~~i~~~G~~~~~ 146 (291)
T cd01088 71 LKEGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGP-DVRLGEIGEAIEEVIESYGFKPIR 146 (291)
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCEEee
Confidence 999999999999999999999999999995 7889999999999999999999 999999999999999999994 77
Q ss_pred cCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEE
Q 005915 577 HGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRI 628 (670)
Q Consensus 577 h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~Gvri 628 (670)
|.+|||||. +..|++|.+.+...+++.+|++||||+|||. +..|.+.++-
T Consensus 147 ~~~GHgig~-~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~-~s~G~G~v~~ 196 (291)
T cd01088 147 NLTGHSIER-YRLHAGKSIPNVKGGEGTRLEEGDVYAIEPF-ATTGKGYVHD 196 (291)
T ss_pred cCCccCccC-ccccCCCccCccCCCCCCEeCCCCEEEEcee-EECCCCeeec
Confidence 999999993 2688887643333457889999999999995 4566666654
No 35
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.93 E-value=8.4e-25 Score=238.39 Aligned_cols=328 Identities=20% Similarity=0.262 Sum_probs=244.6
Q ss_pred ccccccccccCCCCCceeeEEEEEeCCceEEEEeCCCCCHHHHhhh---h---c--CCeE--EEecc-----cHHHHHHH
Q 005915 279 IAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHL---K---N--AGVE--LRPYN-----SILSEIKS 343 (670)
Q Consensus 279 i~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~~~l---~---~--~~v~--i~~y~-----~~~~~l~~ 343 (670)
..||+|+.-.+ ..+++.++..++++...+. +..... . + ..|. +++-. -+...++.
T Consensus 20 ~~WLlGYEfpd--------Tilv~~~~~i~iltSkkKa--~~l~~~~~~~~~~~~~~~v~llvR~k~d~n~~~fdkii~~ 89 (960)
T KOG1189|consen 20 FTWLLGYEFPD--------TILVLCKDKIYILTSKKKA--EFLQKVTNLAQSSEGKPTVNLLVRDKNDDNKGLFDKIIKA 89 (960)
T ss_pred HHHHhccccCc--------eEEEEecCcEEEEecchhH--HHHHhhcccccCcccCcceEEEecccCccccccHHHHHHH
Confidence 46999986433 4566677777777754332 121111 0 0 1122 22111 13333444
Q ss_pred HHhcCCEEEEeCC-CchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHH
Q 005915 344 LAAQGAQLWLDPS-SVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGML 422 (670)
Q Consensus 344 l~~~~~rIgve~~-~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R 422 (670)
+...++++|+-.. ..+-.+.+.....+. ..+.+.+|.+..+..+-+||++.||+.+|
T Consensus 90 ik~~gk~vGvf~ke~~~G~F~~~W~~~l~----------------------~~~fn~vDis~~ls~l~avKDd~Ei~~ir 147 (960)
T KOG1189|consen 90 IKSAGKKVGVFAKEKFQGEFMESWNKRLE----------------------AGGFNKVDISLGLSKLFAVKDDEEIANIR 147 (960)
T ss_pred HHhcCCeeeeecccccchhHHHHHHHHhh----------------------hcCCceeehhhhhhhheeeccHHHHHHHH
Confidence 4335788887643 344455555555442 13677899999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHhcCCCcCHHHHHHHHHHHHHh---hCCC----CCCCCceeEeeCCCCccccccCCCCC
Q 005915 423 NSHLRDAAALAQF-WVWLEEEIHNGAKLTEVDVADKLLEFRSK---QSGF----LDTSFDTISGSGANGAIIHYKPEPGK 494 (670)
Q Consensus 423 ~A~~i~~~a~~~~-~~~l~~~i~~~~G~TE~eia~~~~~~~~~---~~G~----~~~~f~~iv~sG~~~a~~h~~p~~~~ 494 (670)
.|+.++.+.|..+ ...+.+.+++...+|+.-+...++..+.. ..|. ..+.|+||++||.+..+-...-++
T Consensus 148 ksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d~cY~PIiqSGg~ydlk~sa~s~-- 225 (960)
T KOG1189|consen 148 KSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLDMCYPPIIQSGGKYDLKPSAVSD-- 225 (960)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccccccChhhhcCCccccccccccc--
Confidence 9999999999854 45666777777788999998888865432 1221 357899999999988763222222
Q ss_pred CcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCC-
Q 005915 495 CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL- 573 (670)
Q Consensus 495 ~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~- 573 (670)
+..| + +|++.+|++|++||++++||+.+. |+.+|++.|+.++.+|++++.++|| |+..++||.++.+++++.+.
T Consensus 226 ~~~L--~-~I~cs~G~RynsYCSNv~RT~Lid-pssemq~nY~fLl~aqe~il~~lrp-G~ki~dVY~~~l~~v~k~~Pe 300 (960)
T KOG1189|consen 226 DNHL--H-VILCSLGIRYNSYCSNVSRTYLID-PSSEMQENYEFLLAAQEEILKLLRP-GTKIGDVYEKALDYVEKNKPE 300 (960)
T ss_pred cccc--c-eEEeeccchhhhhhccccceeeec-chHHHHHHHHHHHHHHHHHHHhhcC-CCchhHHHHHHHHHHHhcCcc
Confidence 3566 4 999999999999999999999998 8999999999999999999999999 99999999999999999987
Q ss_pred ---CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeee------cCcceEEEEEEEEEecCCCCCCCC
Q 005915 574 ---DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYE------DHAFGIRIENLLYVKEVGTPNRFG 644 (670)
Q Consensus 574 ---~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~------~~~~GvriED~v~Vte~g~~~~~~ 644 (670)
.+....|.||| |+..|.-..++. .++.+|++||||.|..|+-. .+.+.+-+.|||+|+++++
T Consensus 301 l~~~~~k~lG~~iG--lEFREssl~ina--Knd~~lk~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e~~p----- 371 (960)
T KOG1189|consen 301 LVPNFTKNLGFGIG--LEFRESSLVINA--KNDRVLKKGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGEDPP----- 371 (960)
T ss_pred hhhhhhhhcccccc--eeeecccccccc--cchhhhccCcEEEEeeccccccCcccccchhhhccceeeecCCCc-----
Confidence 36677999999 999999877764 48899999999999988752 2457888999999999953
Q ss_pred CccccceeEccCCCcc
Q 005915 645 GVSYLGFEKLTFVPIQ 660 (670)
Q Consensus 645 ~~~~lG~E~LT~~P~~ 660 (670)
.+.||.++..
T Consensus 372 ------~~vLT~~~K~ 381 (960)
T KOG1189|consen 372 ------AEVLTDSAKA 381 (960)
T ss_pred ------chhhcccchh
Confidence 3889987764
No 36
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.81 E-value=8e-19 Score=188.17 Aligned_cols=231 Identities=14% Similarity=0.147 Sum_probs=182.2
Q ss_pred CcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHh---------hCC
Q 005915 397 PAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---------QSG 467 (670)
Q Consensus 397 ~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~---------~~G 467 (670)
...+|++.-+..+-.+|+.+||+.+|.+++.....|..+.+.++..++..-.+|...+...++...-. ..|
T Consensus 155 fN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~ 234 (1001)
T COG5406 155 FNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLG 234 (1001)
T ss_pred cchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCcccc
Confidence 45678888899999999999999999999988888886666665555434456666666666542110 111
Q ss_pred -----CCCCCCceeEeeCCCCcc-ccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHH
Q 005915 468 -----FLDTSFDTISGSGANGAI-IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQ 541 (670)
Q Consensus 468 -----~~~~~f~~iv~sG~~~a~-~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~ 541 (670)
-..+.|.||++||....+ |.....+ ..+ .||+|++.+|.+|+|||++++||+++. |+.+|++-|+.++.
T Consensus 235 ~~~~d~lew~ytpiiqsg~~~Dl~psa~s~~---~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~d-p~~e~~~Ny~fl~~ 309 (1001)
T COG5406 235 DIDLDQLEWCYTPIIQSGGSIDLTPSAFSFP---MEL-TGDVVLLSIGIRYNGYCSNMSRTILTD-PDSEQQKNYEFLYM 309 (1001)
T ss_pred ccchhhhhhhcchhhccCceeecccccccCc---hhh-cCceEEEEeeeeeccccccccceEEeC-CchHhhhhHHHHHH
Confidence 124788999999976544 2222222 444 588999999999999999999999998 89999999999999
Q ss_pred HHHHHHHhhCCCCCChhHHHHHHHHHHHHcCC----CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECce
Q 005915 542 GHIALDQAIFPQSTPGFVLDAFARSSLWKIGL----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPG 617 (670)
Q Consensus 542 a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~----~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPg 617 (670)
+|..++..+|| |+..++|+..+.+++.+.|. +|...+|-+|| ++.++...+++. .+..+|+.||+|.|.-|
T Consensus 310 lQk~i~~~~rp-G~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~ig--iefR~s~~~~nv--kn~r~lq~g~~fnis~g 384 (1001)
T COG5406 310 LQKYILGLVRP-GTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIG--IEFRSSQKPFNV--KNGRVLQAGCIFNISLG 384 (1001)
T ss_pred HHHHHHhhcCC-CCCchhHHHHHHHHHHhcCCccCchHhhhhhhhcc--ccccccccceec--cCCceeccccEEEEeec
Confidence 99999999999 99999999999999999987 46677899999 998887654554 37799999999999887
Q ss_pred eee------cCcceEEEEEEEEEecC
Q 005915 618 YYE------DHAFGIRIENLLYVKEV 637 (670)
Q Consensus 618 iy~------~~~~GvriED~v~Vte~ 637 (670)
+-. ...+.+.+-||+-|+-+
T Consensus 385 f~nl~~~~~~Nnyal~l~dt~qi~ls 410 (1001)
T COG5406 385 FGNLINPHPKNNYALLLIDTEQISLS 410 (1001)
T ss_pred ccccCCCCcccchhhhhccceEeecC
Confidence 642 23567788888888876
No 37
>PRK09795 aminopeptidase; Provisional
Probab=99.70 E-value=5.9e-15 Score=160.07 Aligned_cols=122 Identities=20% Similarity=0.322 Sum_probs=98.8
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCceEEEEeCCCcEEEEccccHHHHHhhccCce
Q 005915 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLSSSW 162 (670)
Q Consensus 83 ~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g~lvv~~~~~~L~td~ry~~qa~~~~~~~~ 162 (670)
+||++||++|++ +++||+||+++ .|++|||||+|+.|++||+.++++||||+||.+||+++.+. .
T Consensus 2 ~Rl~~l~~~m~~--~~lDa~lI~~~------------~n~~YLTGf~g~~g~llIt~~~~~l~td~ry~~qa~~~~~~-~ 66 (361)
T PRK09795 2 TLLASLRDWLKA--QQLDAVLLSSR------------QNKQPHLGISTGSGYVVISRESAHILVDSRYYADVEARAQG-Y 66 (361)
T ss_pred cHHHHHHHHHHH--CCCCEEEECCc------------cccccccCccCCCeEEEEECCCCEEEcCcchHHHHHhhCCC-c
Confidence 589999999999 99999999998 59999999999999999999999999999999999888753 3
Q ss_pred EEEEcCCCCCCCHHHHHHhhcC--CCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhh
Q 005915 163 ILMRSGNHGVPTTFEWLNDVLA--PGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~~~~--~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw 228 (670)
++.... +.+.+.++|.+.+. +.++||||.+.+++..+++|++.+. .++++. .++.++
T Consensus 67 ~v~~~~--~~~~~~~~L~~~L~~~~~~~Ig~e~~~~s~~~~~~L~~~l~---~~~~~~----~~~~lR 125 (361)
T PRK09795 67 QLHLLD--ATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSELN---AKLVSA----TPDVLR 125 (361)
T ss_pred eEEEec--CCccHHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhcC---cccccc----cHHHHh
Confidence 333322 23456677877664 3478999999999999999988752 355553 367775
No 38
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.59 E-value=2.6e-15 Score=138.33 Aligned_cols=125 Identities=26% Similarity=0.386 Sum_probs=101.3
Q ss_pred HHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCC---cCCceEEE-EeCCCcEEEEc-cccHHHHHhhc
Q 005915 84 KLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGF---TGSAGTAV-VTKDKAALWTD-GRYFLQAEKQL 158 (670)
Q Consensus 84 Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF---~gs~g~lv-v~~~~~~L~td-~ry~~qa~~~~ 158 (670)
|++++|+.|++ .++|+++|+++ .|++||||| +++.++++ ++.++++||+| ++|..+++...
T Consensus 1 Rl~rl~~~m~~--~gid~lll~~~------------~ni~YltG~~~~~~~~~~~l~i~~~~~~l~~~~~~~~~~~~~~~ 66 (132)
T PF01321_consen 1 RLERLRAAMAE--AGIDALLLTSP------------ENIRYLTGFRWQPGERPVLLVITADGAVLFVPKGEYERAAEESA 66 (132)
T ss_dssp HHHHHHHHHHH--TT-SEEEEESH------------HHHHHHHS--ST-TSSEEEEEEESSSEEEEEEGGGHHHHHHHHT
T ss_pred CHHHHHHHHHH--CCCCEEEEcCh------------hhceEecCCCcCCCcceEEEEecccCcEEEeccccHHHHHHhhc
Confidence 89999999999 99999999998 699999999 88888777 88888899999 77777766661
Q ss_pred cCceEEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhh
Q 005915 159 SSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw 228 (670)
. ..++..... ..+++.++|++.+...++||+|.+.+|+..+++|++.+++ .+++++ +++|++++
T Consensus 67 ~-~~~v~~~~~-~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~~~~--~~~v~~--~~~i~~~R 130 (132)
T PF01321_consen 67 P-DDEVVEYED-PYEAIAEALKKLGPEGKRIGVEPDSLSAAEYQRLQEALPG--AEFVDA--SPLIEELR 130 (132)
T ss_dssp T-SSEEEEEST-HHHHHHHHHHHHTTTTSEEEEETTTSBHHHHHHHHHHSTT--SEEEEE--HHHHHHHH
T ss_pred C-CceEEEEec-ccchHHHHHHHhCCCCCEEEEcCCcChHHHHHHHHHhCCC--CEEEEc--HHHHHHcC
Confidence 2 234433321 1467888999987777999999999999999999999976 599999 99999886
No 39
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.51 E-value=2e-14 Score=132.48 Aligned_cols=128 Identities=23% Similarity=0.377 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCCceEEEEeCCCCCHHHHhhhhcCCeEEEec
Q 005915 255 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVELRPY 334 (670)
Q Consensus 255 Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~~~l~~~~v~i~~y 334 (670)
|++|+|+.|+++|+|++|+++++|++|||||+... ...| .++++++++.++|++..++.....+. ....++..|
T Consensus 1 Rl~rl~~~m~~~gid~lll~~~~ni~YltG~~~~~-~~~~---~~l~i~~~~~~l~~~~~~~~~~~~~~--~~~~~v~~~ 74 (132)
T PF01321_consen 1 RLERLRAAMAEAGIDALLLTSPENIRYLTGFRWQP-GERP---VLLVITADGAVLFVPKGEYERAAEES--APDDEVVEY 74 (132)
T ss_dssp HHHHHHHHHHHTT-SEEEEESHHHHHHHHS--ST--TSSE---EEEEEESSSEEEEEEGGGHHHHHHHH--TTSSEEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEcChhhceEecCCCcCC-Ccce---EEEEecccCcEEEeccccHHHHHHhh--cCCceEEEE
Confidence 89999999999999999999999999999996221 1122 34448888889999966655444433 133466666
Q ss_pred cc----HHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCcccccc
Q 005915 335 NS----ILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSK 410 (670)
Q Consensus 335 ~~----~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR 410 (670)
.+ +.+.+++++.+.++||+|.+.+++..++.|++.+ |+.+++|+++++..+|
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~~------------------------~~~~~v~~~~~i~~~R 130 (132)
T PF01321_consen 75 EDPYEAIAEALKKLGPEGKRIGVEPDSLSAAEYQRLQEAL------------------------PGAEFVDASPLIEELR 130 (132)
T ss_dssp STHHHHHHHHHHHHTTTTSEEEEETTTSBHHHHHHHHHHS------------------------TTSEEEEEHHHHHHHH
T ss_pred ecccchHHHHHHHhCCCCCEEEEcCCcChHHHHHHHHHhC------------------------CCCEEEEcHHHHHHcC
Confidence 55 4556677665569999999999999999999864 5789999999999999
Q ss_pred cc
Q 005915 411 AV 412 (670)
Q Consensus 411 ~v 412 (670)
+|
T Consensus 131 ~I 132 (132)
T PF01321_consen 131 MI 132 (132)
T ss_dssp TS
T ss_pred cC
Confidence 86
No 40
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=99.33 E-value=2.1e-11 Score=133.68 Aligned_cols=133 Identities=15% Similarity=0.220 Sum_probs=96.3
Q ss_pred CCHHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCc----eEEEEe-CCCcEEEEccccHHH
Q 005915 79 DAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSA----GTAVVT-KDKAALWTDGRYFLQ 153 (670)
Q Consensus 79 ~~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~----g~lvv~-~~~~~L~td~ry~~q 153 (670)
..+..|+++||+.|++ +++|++||+++ .|++|||||++.. .++||+ +++++|+++.++..+
T Consensus 9 ~E~~~Rl~rl~~~m~~--~~lDalli~~~------------~ni~YltG~~~~~~~~~~~l~v~~~~~~~l~~~~~~~~~ 74 (391)
T TIGR02993 9 AEYQARLDKTRAAMEA--RGIDLLIVTDP------------SNMAWLTGYDGWSFYVHQCVLLPPEGEPIWYGRGQDANG 74 (391)
T ss_pred HHHHHHHHHHHHHHHH--cCCCEEEEcCc------------ccceeeccCCCCceEEEEEEEEcCCCceEEEehhhhhhh
Confidence 3456899999999999 99999999998 6999999999764 345555 567889898888877
Q ss_pred HHhhccCc-eEEEEcCC----CCCCCHHHHHHhhcC----CCCeEEEcCCc--ccHHHHHHHHHHHhcCCcEEEEcccch
Q 005915 154 AEKQLSSS-WILMRSGN----HGVPTTFEWLNDVLA----PGGRVGIDPFL--FSSDAAEELKEAIAKKNHELVYLYDLN 222 (670)
Q Consensus 154 a~~~~~~~-~~~~~~~~----~~~~~~~~~l~~~~~----~~~~vg~e~~~--~s~~~~~~L~~~l~~~~~~lv~~~~~~ 222 (670)
++.+.... -.+..... ...+++++++.+.+. ..++||||.+. +|+..++.|++.++. ++++++ +.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l~~--~~~~d~--~~ 150 (391)
T TIGR02993 75 AKRTAFMDHDNIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHLPN--ARFVDA--TA 150 (391)
T ss_pred HhheeeccccceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhCCC--CEEEeh--HH
Confidence 76553110 01111100 011345555655442 23589999885 899999999999865 689998 99
Q ss_pred hHHHhhh
Q 005915 223 LVDVIWK 229 (670)
Q Consensus 223 lv~~lw~ 229 (670)
+|++++.
T Consensus 151 ~~~~lR~ 157 (391)
T TIGR02993 151 LVNWQRA 157 (391)
T ss_pred HHHHHHc
Confidence 9999873
No 41
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.33 E-value=2.9e-11 Score=120.91 Aligned_cols=237 Identities=14% Similarity=0.138 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHH---hhCC-CCCCCCceeEeeCCCCccccccCCC
Q 005915 417 ELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRS---KQSG-FLDTSFDTISGSGANGAIIHYKPEP 492 (670)
Q Consensus 417 EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~---~~~G-~~~~~f~~iv~sG~~~a~~h~~p~~ 492 (670)
...-+|+|+.+..++-..+.+++ +||||-.||+..++.... ...| ..+.+||+=++ -|.+-.||.|+.
T Consensus 84 i~~d~rraAE~HRqvR~yv~s~i------kPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~S--lN~cAAHyTpNa 155 (397)
T KOG2775|consen 84 IYQDLRRAAEAHRQVRKYVQSII------KPGMTMIEICETIENTTRKLILENGLNAGIGFPTGCS--LNHCAAHYTPNA 155 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc------cCcccHHHHHHHHHHHHHHHHHhccccccccCCCccc--ccchhhhcCCCC
Confidence 34455665544444444444444 999999999999986422 1223 23578876443 566668999998
Q ss_pred CCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcC
Q 005915 493 GKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIG 572 (670)
Q Consensus 493 ~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G 572 (670)
++..+|+.+|+..||+|.+.+|-..|.+.|+.|.+ ....+..++.+|...+++..-- -++.+||.+++++++..+-
T Consensus 156 Gd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F~p---~~d~Ll~AvreaT~tGIkeaGi-DvRlcdiG~aiqEVmeSyE 231 (397)
T KOG2775|consen 156 GDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAFNP---KYDPLLAAVREATNTGIKEAGI-DVRLCDIGEAIQEVMESYE 231 (397)
T ss_pred CCceeeeecceEEEeccccccCeEeeeeeEEeeCc---cccHHHHHHHHHHhhhhhhcCc-eeeehhhhHHHHHHhhheE
Confidence 88889999999999999999999999999999863 5677899999999999998775 7899999999999999875
Q ss_pred C----------CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEE-----EecC
Q 005915 573 L----------DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLY-----VKEV 637 (670)
Q Consensus 573 ~----------~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~-----Vte~ 637 (670)
. ..+.-.||+|+.| .+|-+-.+-....+..+.+++|.+++||. +....-|+-.+|+=. ..+.
T Consensus 232 vEi~Gk~~~VKpIrnLnGHSI~~y-rIH~gksVPiVkgge~trmee~e~yAIET--FgSTGkG~v~ddmecSHymkn~~~ 308 (397)
T KOG2775|consen 232 VEINGKTYQVKPIRNLNGHSIAQY-RIHGGKSVPIVKGGEQTRMEEGEIYAIET--FGSTGKGYVHDDMECSHYMKNFEL 308 (397)
T ss_pred EEeCCceecceeccccCCCcccce-EeecCcccceecCCcceeecCCeeEEEEe--eccCCcceecCCcccchhhhhccc
Confidence 4 1345679999965 46665321112345889999999999995 222222433333211 1111
Q ss_pred CC--CCCCCCccccce--eEccCCCcchhHhhhhh
Q 005915 638 GT--PNRFGGVSYLGF--EKLTFVPIQVCHENRIA 668 (670)
Q Consensus 638 g~--~~~~~~~~~lG~--E~LT~~P~~~~~i~~~~ 668 (670)
+. .+.-..+++|.. .++..+|++++.|+|+|
T Consensus 309 ~~vplrl~~~K~ll~~I~knfgTLaFcrR~lDrlG 343 (397)
T KOG2775|consen 309 GHVPLRLQRSKGLLNTIDKNFGTLAFCRRWLDRLG 343 (397)
T ss_pred cccccccHHHHHHHHHHhhccccccccHHHHHHhh
Confidence 10 000111223333 56667899999998886
No 42
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.17 E-value=9.1e-10 Score=113.28 Aligned_cols=155 Identities=11% Similarity=0.060 Sum_probs=131.1
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhh---------CCCCCCCCceeEeeC
Q 005915 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQ---------SGFLDTSFDTISGSG 480 (670)
Q Consensus 410 R~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~---------~G~~~~~f~~iv~sG 480 (670)
..+-++.-+..+|.|+.|+..++..+.+.+ .+|.+-.||+..-..++.+. .--.+.+||+-++
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~------~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Is-- 84 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELC------QPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSIS-- 84 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHh------cCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceec--
Confidence 345678889999999999999999988877 89999999998877654432 2234689998765
Q ss_pred CCCccccccCCCCC-CcccCCCCeEEEecceeECCeecceEEEEEcCCCC-----HHHHHHHHHHHHHHHHHHHhhCCCC
Q 005915 481 ANGAIIHYKPEPGK-CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPT-----AREKECFTRVLQGHIALDQAIFPQS 554 (670)
Q Consensus 481 ~~~a~~h~~p~~~~-~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~-----~e~~~~~~~v~~a~~a~~~~~~P~G 554 (670)
.|-+..|+.|...+ +..|+.||+|.||+|++++||.+.++.|++||+++ ....++..++..|.+++++.++| |
T Consensus 85 vnncv~h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkp-g 163 (398)
T KOG2776|consen 85 VNNCVCHFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKP-G 163 (398)
T ss_pred ccceeeccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCC-C
Confidence 57778899997543 67899999999999999999999999999998643 56778888889999999999999 9
Q ss_pred CChhHHHHHHHHHHHHcCC
Q 005915 555 TPGFVLDAFARSSLWKIGL 573 (670)
Q Consensus 555 ~~~~ev~~~a~~~l~~~G~ 573 (670)
.+-.+|-+++.+.+...|.
T Consensus 164 n~n~~vT~~i~k~aas~~c 182 (398)
T KOG2776|consen 164 NTNTQVTRAIVKTAASYGC 182 (398)
T ss_pred CCCchhhHHHHHHHHHhCC
Confidence 9999999999999999887
No 43
>PRK14575 putative peptidase; Provisional
Probab=99.17 E-value=7.8e-09 Score=113.89 Aligned_cols=129 Identities=17% Similarity=0.208 Sum_probs=93.3
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCc---------eEEEEeCC-C-cE-EEEcccc
Q 005915 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSA---------GTAVVTKD-K-AA-LWTDGRY 150 (670)
Q Consensus 83 ~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~---------g~lvv~~~-~-~~-L~td~ry 150 (670)
.-++++|+.|++ +++|+++|+++ +|++|||||.+.. +.+||+.+ + ++ |+++..+
T Consensus 11 ~~~~rlr~~m~~--~glD~lvl~~p------------~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E 76 (406)
T PRK14575 11 TVSRKLRTIMER--DNIDAVIVTTC------------DNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFE 76 (406)
T ss_pred HHHHHHHHHHHH--cCCCEEeecCc------------chheeecccccccceecccCCceEEEEEcCCCCCceEEechhh
Confidence 358899999999 99999999999 6999999998753 34677765 3 45 8999999
Q ss_pred HHHHHhhccC----ceEEEEcCCCCC------------------CCHHHHHHhhc----CCCCeEEEcCCcccHHHHHHH
Q 005915 151 FLQAEKQLSS----SWILMRSGNHGV------------------PTTFEWLNDVL----APGGRVGIDPFLFSSDAAEEL 204 (670)
Q Consensus 151 ~~qa~~~~~~----~~~~~~~~~~~~------------------~~~~~~l~~~~----~~~~~vg~e~~~~s~~~~~~L 204 (670)
...++.+... .+.+........ +...+.+++.+ ..+++||+|.+.++...++.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l 156 (406)
T PRK14575 77 AASLTLDMPNAELKTFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVI 156 (406)
T ss_pred hhhhcccccccccccCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccCCCCHHHHHHH
Confidence 9998865321 122222211111 11112343332 355899999999999999999
Q ss_pred HHHHhcCCcEEEEcccchhHHHhhh
Q 005915 205 KEAIAKKNHELVYLYDLNLVDVIWK 229 (670)
Q Consensus 205 ~~~l~~~~~~lv~~~~~~lv~~lw~ 229 (670)
+..++. ++++++ +++|++++.
T Consensus 157 ~~~lp~--~~~~d~--~~~l~~lR~ 177 (406)
T PRK14575 157 DAVMPN--VDFVDS--SSIFNELRV 177 (406)
T ss_pred HHhCCC--CeEEEc--HHHHHHHHh
Confidence 998876 589998 999999973
No 44
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=98.95 E-value=3e-07 Score=100.77 Aligned_cols=131 Identities=24% Similarity=0.347 Sum_probs=98.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcC--Cc--eEEEEeC-CCcEEEEccccHHHH
Q 005915 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTG--SA--GTAVVTK-DKAALWTDGRYFLQA 154 (670)
Q Consensus 80 ~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~g--s~--g~lvv~~-~~~~L~td~ry~~qa 154 (670)
.+..|+.+++..|++ +++|+++++++ .|++|+|||+. .. ..++++. ++++|+++++|.+++
T Consensus 9 ~~~~rl~~~~~~~~~--~~~~~~~~~~~------------~n~~yltg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 74 (384)
T COG0006 9 EYRARLARLRELMEE--AGLDALLLTSP------------SNFYYLTGFDAFGFERLQALLVPAEGEPVLFVRGRDEEAA 74 (384)
T ss_pred HHHHHHHHHHHHHHH--cCCcEEEecCC------------CceEEEeCCCCCcccceEEEEEcCCCceEEEEcchhHHHH
Confidence 345799999999999 99999999998 69999999994 33 2344544 459999999999999
Q ss_pred HhhccC---ceEEEEcCCCCCCCHHHHHHhhc----CCCCeEEEcCCc--ccHHHHHHHHHHHhcCCcEEEEcccchhHH
Q 005915 155 EKQLSS---SWILMRSGNHGVPTTFEWLNDVL----APGGRVGIDPFL--FSSDAAEELKEAIAKKNHELVYLYDLNLVD 225 (670)
Q Consensus 155 ~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~----~~~~~vg~e~~~--~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~ 225 (670)
...... ++..+........ +.+.+.+.+ .....+|+|... +++..++.|++.++.. ++++. .++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~--~~~~~--~~~i~ 149 (384)
T COG0006 75 KETSWIKLENVEVYEDDEDPAA-PLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQAALPRA--ELVDA--SDLVD 149 (384)
T ss_pred HhhcccccCceEEEecCCcccc-HHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHhhCCCC--EEecc--HHHHH
Confidence 988742 3444444332111 334444333 235789999985 8999999999998763 89998 99999
Q ss_pred Hhhh
Q 005915 226 VIWK 229 (670)
Q Consensus 226 ~lw~ 229 (670)
.++.
T Consensus 150 ~lR~ 153 (384)
T COG0006 150 RLRL 153 (384)
T ss_pred HHHh
Confidence 9974
No 45
>PRK14576 putative endopeptidase; Provisional
Probab=98.93 E-value=2.3e-08 Score=110.17 Aligned_cols=126 Identities=17% Similarity=0.199 Sum_probs=86.1
Q ss_pred HHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCC-------ceEE--EEeCC--Cc-EEEEccccHH
Q 005915 85 LRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGS-------AGTA--VVTKD--KA-ALWTDGRYFL 152 (670)
Q Consensus 85 l~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs-------~g~l--vv~~~--~~-~L~td~ry~~ 152 (670)
-+++|+.|++ +++|++++++| .|++|||||... .+++ |++.+ ++ .++++..+..
T Consensus 13 ~~r~r~~M~~--~gldalll~~p------------~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~~ 78 (405)
T PRK14576 13 SRKARVVMER--EGIDALVVTVC------------DNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEAA 78 (405)
T ss_pred HHHHHHHHHH--cCCCEEEeccc------------cceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhhh
Confidence 4589999999 99999999999 599999999965 1322 23334 24 7899988888
Q ss_pred HHHhhccC----ceEEEEcCCCCC-----------------CCHHH----HHHhhcCCCCeEEEcCCcccHHHHHHHHHH
Q 005915 153 QAEKQLSS----SWILMRSGNHGV-----------------PTTFE----WLNDVLAPGGRVGIDPFLFSSDAAEELKEA 207 (670)
Q Consensus 153 qa~~~~~~----~~~~~~~~~~~~-----------------~~~~~----~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~ 207 (670)
.++..... .+.......... +.+.+ .|.+....+++||+|.+.++...+..|.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~ 158 (405)
T PRK14576 79 STHFDMPNSVLKTFPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQAMSNGGKGVLDKV 158 (405)
T ss_pred hhhccccccccccCCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCCCCHHHHHHHHhh
Confidence 87633110 111111111111 11112 333333355899999999999999999988
Q ss_pred HhcCCcEEEEcccchhHHHhh
Q 005915 208 IAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 208 l~~~~~~lv~~~~~~lv~~lw 228 (670)
++. .++++. +++|++++
T Consensus 159 ~~~--~~~vd~--~~~l~~lR 175 (405)
T PRK14576 159 APG--LKLVDS--TALFNEIR 175 (405)
T ss_pred CCC--CeEEEc--HHHHHHHH
Confidence 865 689998 99999987
No 46
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=98.06 E-value=8e-06 Score=90.13 Aligned_cols=108 Identities=16% Similarity=0.245 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCccc------------ccccccccccCCCCCceeeEEEEEeCCceEEEEeCCCCCHHHH
Q 005915 254 SKLSSLRSDLVDAGSSAIVISMLDE------------IAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVM 321 (670)
Q Consensus 254 ~Rl~rlr~~M~e~glDallis~~~n------------i~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~ 321 (670)
.++.++|+.|++.+++|+|+.+.|. ++|++||.|+. |+++||..++.|||| +||-.++.
T Consensus 10 ~~~~~~~~~~~~~~i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsa--------g~Avit~~~a~lwtD-~RY~~QA~ 80 (606)
T KOG2413|consen 10 FELMRLRELMKSPPIDAYILPSTDAHQSEYIADRDERRAFLSGFSGSA--------GTAVITEEEAALWTD-GRYFQQAE 80 (606)
T ss_pred HHHHHHHHHhcCCCceEEEccCCchhhhhhhcchhhhhhhhcccCCCc--------ceEEEecCcceEEEc-cHHHHHHH
Confidence 3788999999999999999988764 89999999987 899999999999999 46666888
Q ss_pred hhhhcCCeEEEecc---cHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHH
Q 005915 322 DHLKNAGVELRPYN---SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAI 370 (670)
Q Consensus 322 ~~l~~~~v~i~~y~---~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~ 370 (670)
.+++....-.+... .+.+.|.+....+++||+|+..+++..+..+.+.+
T Consensus 81 ~qld~~W~l~k~~~~~~~v~~wl~~~l~~~~~vG~Dp~Lis~~~~~~~~~~l 132 (606)
T KOG2413|consen 81 QQLDSNWTLMKMGEDVPTVEEWLAKVLPEGSRVGIDPTLISFDAWKQLEKSL 132 (606)
T ss_pred hhhcccceeeeccCCCccHHHHHHHhCCCccccccCcceechhHHHhHHHHH
Confidence 88875322233332 46677888777789999999999999998888765
No 47
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.88 E-value=0.0055 Score=67.13 Aligned_cols=112 Identities=20% Similarity=0.187 Sum_probs=80.5
Q ss_pred eecceEEEEEcCCCC--HHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-Cc---cCcc--cccccC
Q 005915 515 GTTDITRTVHFGEPT--AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YR---HGTG--HGVGAA 586 (670)
Q Consensus 515 Y~sD~tRT~~vG~p~--~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~-~~---h~~G--HgiG~~ 586 (670)
..+++.|+..+..|. +..|++-+.+.++++++.++++| |++-.||++++.+.+.+.|.. .. +... ...|
T Consensus 127 ~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irp-GvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts-- 203 (396)
T PLN03158 127 PNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKP-GVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTS-- 203 (396)
T ss_pred cccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCccccccccCCCceeeec--
Confidence 356777888888665 56678888888999999999999 999999999999998887742 11 1111 1123
Q ss_pred Ccccc-CCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEec
Q 005915 587 LNVHE-GPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (670)
Q Consensus 587 l~~hE-~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte 636 (670)
++ + -++.+ .++.+|++|+++.++.+.+..|..+ -+..|++|++
T Consensus 204 ~N--~~i~Hgi----p~~r~L~~GDiV~iDvg~~~~GY~a-D~tRT~~VG~ 247 (396)
T PLN03158 204 VN--EVICHGI----PDARKLEDGDIVNVDVTVYYKGCHG-DLNETFFVGN 247 (396)
T ss_pred cc--ccccCCC----CCCccCCCCCEEEEEEeEEECCEEE-eEEeEEEcCC
Confidence 22 2 11111 1567899999999999999877544 8899999854
No 48
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.47 E-value=0.023 Score=57.91 Aligned_cols=98 Identities=21% Similarity=0.057 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-Cc---cCc--ccccccCCccccCCCcccccCCCC
Q 005915 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YR---HGT--GHGVGAALNVHEGPQSISFRYGNM 603 (670)
Q Consensus 530 ~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~-~~---h~~--GHgiG~~l~~hE~P~~i~~~~~~~ 603 (670)
+..|++.+.+.+++.++.++++| |++..||..++++.+.+.|.. .. +.. ....| .+. ..|+.. + ++
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~p-G~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~~~-~~~h~~---~-~~ 73 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKP-GVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTS--VNE-VVCHGI---P-DD 73 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecC--CCC-ceeCCC---C-CC
Confidence 45789999999999999999999 999999999999999999873 11 111 11122 110 011101 1 46
Q ss_pred ccccCCCEEEECceeeecCcceEEEEEEEEEec
Q 005915 604 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (670)
Q Consensus 604 ~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte 636 (670)
.+|++|+++.++++....+. ...++.|++|.+
T Consensus 74 ~~l~~Gd~v~id~g~~~~GY-~ad~~RT~~~G~ 105 (238)
T cd01086 74 RVLKDGDIVNIDVGVELDGY-HGDSARTFIVGE 105 (238)
T ss_pred cccCCCCEEEEEEEEEECCE-EEEEEEEEECCC
Confidence 89999999999999876654 558999999865
No 49
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=95.73 E-value=0.051 Score=55.68 Aligned_cols=99 Identities=19% Similarity=0.133 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--C--ccCcccccccCCccccCCCcccccCCCCccc
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--Y--RHGTGHGVGAALNVHEGPQSISFRYGNMTPL 606 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~--~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L 606 (670)
..|++-+.+.++++.+...++| |++..||+..+.+++.+.|.. + .+++.-.+. +.+.|-- ...-|+++.+|
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~p-Gvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~c--iSvNe~v--~HgiP~d~~vl 87 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKP-GVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTC--ISVNEVV--AHGIPGDKKVL 87 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHcCceehhccCcCCCcceE--eehhhee--eecCCCCCccc
Confidence 4566667777888888899999 999999999999999987752 1 122233333 3333311 00112367899
Q ss_pred cCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 607 VEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 607 ~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
++|.++.|..|...+|+.|= ..-|+.|.
T Consensus 88 k~GDiv~IDvg~~~dG~~~D-sa~T~~vg 115 (255)
T COG0024 88 KEGDIVKIDVGAHIDGYIGD-TAITFVVG 115 (255)
T ss_pred CCCCEEEEEEEEEECCeeee-EEEEEECC
Confidence 99999999999999876432 23344454
No 50
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=95.69 E-value=0.097 Score=55.21 Aligned_cols=97 Identities=15% Similarity=0.063 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCCccCcccccccCCccccCCCcccccCCCCccccCC
Q 005915 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 609 (670)
Q Consensus 530 ~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~G 609 (670)
+..+++-+.+.++++++.+.++| |++..||.+.+.+.+.+.|......++ ++ .+. ..++ ..+..+++.+|++|
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~p-G~te~ei~~~~~~~i~~~G~~~afp~~--is--~n~-~~~H-~~p~~~d~~~l~~G 74 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKP-GMTLLEIAEFVENRIRELGAGPAFPVN--LS--INE-CAAH-YTPNAGDDTVLKEG 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHcCCCCCCCce--ec--cCC-EeeC-CCCCCCCCcccCCC
Confidence 35788889999999999999999 999999999999999998853222221 22 211 1122 11112356789999
Q ss_pred CEEEECceeeecCcceEEEEEEEEE
Q 005915 610 MIVSNEPGYYEDHAFGIRIENLLYV 634 (670)
Q Consensus 610 MV~siEPgiy~~~~~GvriED~v~V 634 (670)
+++.++.|...+|. -.-+.-|+.+
T Consensus 75 DvV~iD~G~~~dGY-~sD~arT~~v 98 (291)
T cd01088 75 DVVKLDFGAHVDGY-IADSAFTVDF 98 (291)
T ss_pred CEEEEEEEEEECCE-EEEEEEEEec
Confidence 99999999877653 3333444444
No 51
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=95.37 E-value=0.077 Score=49.25 Aligned_cols=98 Identities=16% Similarity=0.252 Sum_probs=57.9
Q ss_pred cchhHHHHHHHHHHHHHHcCCCEEEEcCc----------------ccccccccccccCCCCCceeeEEEEE-eC--CceE
Q 005915 248 AGLDVASKLSSLRSDLVDAGSSAIVISML----------------DEIAWLLNLRGSDVPHSPVMYAYLIV-EM--DRAK 308 (670)
Q Consensus 248 s~~e~~~Rl~rlr~~M~e~glDallis~~----------------~ni~YLtGf~g~~~~~~P~~~~~llv-t~--~~~~ 308 (670)
+.++|.+|+++|.+.|.+.+ ++||.+. .|+.||||+.-.+ +++++ .. ++.+
T Consensus 2 ~~~~~~~RR~~l~~~l~~~~--~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~--------~~lvl~~~~~~~~~ 71 (134)
T PF05195_consen 2 PAEEYAERRKKLAEKLPDNS--IVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPD--------AVLVLKDGESGKST 71 (134)
T ss_dssp EHHHHHHHHHHHHHHSHSSE--EEEEE----EEEETTEEE-----HHHHHHH---STT---------EEEEEECTTEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCc--EEEEECCCeeeecCCCccccccCCcEEEEeCCCCCC--------EEEEEecCCCCeEE
Confidence 45789999999999999732 2333221 4699999987544 66777 32 4789
Q ss_pred EEEeCCCCCHH--------HHhhhhcCCe-EEEecccHHHHHHHHHhcCCEEEEeC
Q 005915 309 LFVDDSKVTPD--------VMDHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDP 355 (670)
Q Consensus 309 Lfvd~~~~~~~--------~~~~l~~~~v-~i~~y~~~~~~l~~l~~~~~rIgve~ 355 (670)
||++......+ ..+.....++ ++.+.+++.+.|.++......+.++.
T Consensus 72 LF~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~~~~~~~~~~~ 127 (134)
T PF05195_consen 72 LFVPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELLKRSRTVYYDL 127 (134)
T ss_dssp EEE----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHHTTTSCEEE-T
T ss_pred EEeCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHHcCCCEEEEEC
Confidence 99975433221 1222222456 67888899999998876666676664
No 52
>PRK05716 methionine aminopeptidase; Validated
Probab=95.29 E-value=0.15 Score=52.32 Aligned_cols=96 Identities=15% Similarity=-0.004 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--CccCccc----ccccCCccccCCCcccccCCCCc
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGH----GVGAALNVHEGPQSISFRYGNMT 604 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~h~~GH----giG~~l~~hE~P~~i~~~~~~~~ 604 (670)
..|++.+.+.+++.++.++++| |++..||..++++.+.+.|.. +.+..++ ..| .+. -.+. . ..++.
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~p-G~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g--~~~-~~~h---~-~~~~~ 84 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKP-GVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTS--VNE-VVCH---G-IPSDK 84 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEec--ccc-eeec---C-CCCCc
Confidence 4567888888899999999999 999999999999999998863 1111111 112 110 0111 1 12568
Q ss_pred cccCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 605 ~L~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
+|++||++.++.|....+ +..-+.-|+.|.
T Consensus 85 ~l~~Gd~v~id~g~~~~g-Y~~d~~RT~~vG 114 (252)
T PRK05716 85 VLKEGDIVNIDVTVIKDG-YHGDTSRTFGVG 114 (252)
T ss_pred ccCCCCEEEEEEEEEECC-EEEEeEEEEECC
Confidence 999999999999987643 466788888874
No 53
>PRK12896 methionine aminopeptidase; Reviewed
Probab=94.73 E-value=0.19 Score=51.63 Aligned_cols=108 Identities=18% Similarity=0.138 Sum_probs=72.7
Q ss_pred EEEEEcCCCCH--HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--Cc--cCcc--cccccCCcccc
Q 005915 520 TRTVHFGEPTA--REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YR--HGTG--HGVGAALNVHE 591 (670)
Q Consensus 520 tRT~~vG~p~~--e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~--h~~G--HgiG~~l~~hE 591 (670)
.|++.+-.+.+ ..|++.+.+.+++.++.+.++| |++-.||...++..+.+.|.. +. .... -..| .+ ..
T Consensus 5 ~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~n-~~ 80 (255)
T PRK12896 5 GRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEP-GMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCIS--VN-EE 80 (255)
T ss_pred CCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEec--CC-Ce
Confidence 57777765443 4567777777888888899999 999999999999999998863 11 1111 1122 22 11
Q ss_pred CCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEec
Q 005915 592 GPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (670)
Q Consensus 592 ~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte 636 (670)
.++.. + ++.+|++|.++.++.|....+ +..-+.-|+++.+
T Consensus 81 ~~h~~---p-~~~~l~~Gd~v~iD~g~~~~g-Y~aD~~RT~~vG~ 120 (255)
T PRK12896 81 VAHGI---P-GPRVIKDGDLVNIDVSAYLDG-YHGDTGITFAVGP 120 (255)
T ss_pred eEecC---C-CCccCCCCCEEEEEEeEEECc-EEEeeEEEEECCC
Confidence 11101 1 457899999999999987654 4556677777743
No 54
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.44 E-value=0.16 Score=52.19 Aligned_cols=96 Identities=16% Similarity=0.164 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--------CccCcccccccCCccccCCCcccccCCC
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--------YRHGTGHGVGAALNVHEGPQSISFRYGN 602 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--------~~h~~GHgiG~~l~~hE~P~~i~~~~~~ 602 (670)
.+|++.....+..+++..+++| |++..|||.++-+..-+.|.+ |+.++= -.+.|- |--.-.+
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~P-gvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~C------TSVNEv---iCHGIPD 193 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRP-GVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVC------TSVNEV---ICHGIPD 193 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCC-CccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhh------cchhhe---eecCCCC
Confidence 4466777778889999999999 999999999999887777641 232221 122221 0000016
Q ss_pred CccccCCCEEEECceeeecCcceEEEEEEEEEecC
Q 005915 603 MTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (670)
Q Consensus 603 ~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~ 637 (670)
.++||.|.++.|...+|..|..|= +.+|++|.+-
T Consensus 194 ~RpLedGDIvNiDVtvY~~GyHGD-lneTffvG~V 227 (369)
T KOG2738|consen 194 SRPLEDGDIVNIDVTVYLNGYHGD-LNETFFVGNV 227 (369)
T ss_pred cCcCCCCCEEeEEEEEEeccccCc-cccceEeecc
Confidence 789999999999999998876553 5677888763
No 55
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=91.57 E-value=1.7 Score=47.70 Aligned_cols=102 Identities=13% Similarity=0.005 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-Ccc--Cccccccc--CCcccc-CCCcccccCC-CCc
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH--GTGHGVGA--ALNVHE-GPQSISFRYG-NMT 604 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~-~~h--~~GHgiG~--~l~~hE-~P~~i~~~~~-~~~ 604 (670)
.+++-+++.+++.++.+.++| |++..||++.+.+.+++.+-. |.. ...+|++. ++.+.+ -++.+ +.++ ++.
T Consensus 22 ~r~Aa~Ia~~~l~~~~~~ikp-G~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~~-P~~~d~~~ 99 (389)
T TIGR00495 22 YKMAGEIANNVLKSVVEACSP-GAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHFS-PLKSDQDY 99 (389)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCCC-CCCCCCCc
Confidence 455666667778888999999 999999999998888875421 111 11122220 021111 11111 1112 347
Q ss_pred cccCCCEEEECceeeecCcceEEEEEEEEEec
Q 005915 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (670)
Q Consensus 605 ~L~~GMV~siEPgiy~~~~~GvriED~v~Vte 636 (670)
+|++|.++.|..|...+| |..-+..|++|.+
T Consensus 100 ~Lk~GDvVkIDlG~~idG-Y~aD~arTv~vG~ 130 (389)
T TIGR00495 100 ILKEGDVVKIDLGCHIDG-FIALVAHTFVVGV 130 (389)
T ss_pred CcCCCCEEEEEEEEEECC-EEEEEEEEEEECC
Confidence 899999999999998876 4666888999864
No 56
>PRK08671 methionine aminopeptidase; Provisional
Probab=91.16 E-value=2.5 Score=44.62 Aligned_cols=96 Identities=14% Similarity=0.115 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--CccCcccccccCCccccCCCcccccCCCCcccc
Q 005915 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLV 607 (670)
Q Consensus 530 ~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~ 607 (670)
+..+++-+.+.++.+.+.+.++| |++..||.+.+.+.+.+.|.. |+..+ ++|.. ..|-.|. ++++.+|+
T Consensus 3 ~~~r~A~~I~~~~~~~~~~~i~p-G~se~ei~~~~~~~i~~~g~~~afp~~v--s~n~~-~~H~~p~-----~~d~~~l~ 73 (291)
T PRK08671 3 EKYLEAGKIASKVREEAAKLIKP-GAKLLDVAEFVENRIRELGAKPAFPCNI--SINEV-AAHYTPS-----PGDERVFP 73 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCccCCCCEE--eeCCC-ccCCCCC-----CCCCcccC
Confidence 35677888888999999999999 999999999999999988753 32211 12210 1232332 23467899
Q ss_pred CCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 608 EGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 608 ~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
+|.++.++.|...+|. -.-+.-|+++.
T Consensus 74 ~GDvV~iD~G~~~dGY-~aD~arT~~vG 100 (291)
T PRK08671 74 EGDVVKLDLGAHVDGY-IADTAVTVDLG 100 (291)
T ss_pred CCCEEEEEEeEEECCE-EEEEEEEEEeC
Confidence 9999999999877653 44556677664
No 57
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=90.88 E-value=2.5 Score=44.73 Aligned_cols=95 Identities=14% Similarity=0.156 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--CccCcccccccCCccccCCCcccccCCCCccccC
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVE 608 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~ 608 (670)
..+++-+.+.++++.+.+.++| |++..||.+.+...+.+.|.. |+..+. ++. ...|-.|. ++++.+|++
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~-G~se~el~~~~e~~~~~~g~~~aFp~~vs--~n~-~~~H~~p~-----~~d~~~l~~ 77 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVP-GVKLLEVAEFVENRIRELGAEPAFPCNIS--INE-CAAHFTPK-----AGDKTVFKD 77 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCccee--cCC-EeeCCCCC-----CCcCccCCC
Confidence 4566777777888888999999 999999999999999998864 322211 111 01233332 234678999
Q ss_pred CCEEEECceeeecCcceEEEEEEEEEe
Q 005915 609 GMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 609 GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
|.++.++.|...+| +-.-+.-|+.+.
T Consensus 78 GDvV~iD~G~~~dG-Y~aD~arT~~vG 103 (295)
T TIGR00501 78 GDVVKLDLGAHVDG-YIADTAITVDLG 103 (295)
T ss_pred CCEEEEEEeEEECC-EEEEEEEEEEeC
Confidence 99999999988766 355566677664
No 58
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=90.76 E-value=0.4 Score=46.04 Aligned_cols=136 Identities=21% Similarity=0.270 Sum_probs=77.3
Q ss_pred HHHHHHHHHHhcCCC----CCccEEEEcCCC-CCCccccccccccceEecCCcCCceEEEEeCCCcEEEEccc---cHHH
Q 005915 82 DEKLRALRELFSRPG----VNIDAYIIPSQD-AHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGR---YFLQ 153 (670)
Q Consensus 82 ~~Rl~~lr~~m~~~~----~~lDa~lI~~~d-~h~se~~~~~~~ni~YlTGF~gs~g~lvv~~~~~~L~td~r---y~~q 153 (670)
.+||.+|.+..+++. .++|+++|.... ..-+.|.-.. .=-.||.||.=...++|+++++-+++|... +.++
T Consensus 7 ~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~~e~~~Y~Ks~-aLq~WLlGYEfpdTiiv~tk~~i~~ltS~KKa~~L~~ 85 (163)
T PF14826_consen 7 HKRLKRLYSSWKEHKDDLWGGADALVIAVGKADEDNPYSKST-ALQTWLLGYEFPDTIIVFTKKKIHFLTSKKKAKFLEP 85 (163)
T ss_dssp HHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S--TTSTT-HHH-HHHHHHHSS--SSEEEEEETTEEEEEEEHHHHHCCCC
T ss_pred HHHHHHHHHHHhccCccccCCCCEEEEEeCCcccCccchhHH-HHHHHHhcccHhhhhhhhcCCEEEEEeCHHHHHHHHH
Confidence 479999999999832 249999887652 1111111000 012589999988888999999988888754 4445
Q ss_pred HHhh----ccCceEEEEcCCCC---CCCHHHHHHhhcC-CCCeEEEcC-CcccHHHHHHHHHHHhcCCcEEEEc
Q 005915 154 AEKQ----LSSSWILMRSGNHG---VPTTFEWLNDVLA-PGGRVGIDP-FLFSSDAAEELKEAIAKKNHELVYL 218 (670)
Q Consensus 154 a~~~----~~~~~~~~~~~~~~---~~~~~~~l~~~~~-~~~~vg~e~-~~~s~~~~~~L~~~l~~~~~~lv~~ 218 (670)
+++. ....+++......| .....+-|.+.+. .+++||+=. +...-...+.+.+.+.+.+.+.||+
T Consensus 86 l~~~~~~~~~~~v~ll~R~k~d~~~~~~~f~kl~~~ik~~g~~vG~~~Kd~~~G~f~~~w~~~l~~~~~~~vDv 159 (163)
T PF14826_consen 86 LKKPAKEGGSIPVELLVRNKKDPEKNKANFEKLIEAIKKAGKKVGVLAKDKFEGKFVDEWKEALKKSGFEKVDV 159 (163)
T ss_dssp HCCCTTTT-SSEEEEEEE-TT-HHHHHHHHHHHHHHHHCCTSEEEE-TT----SHHHHHHHHHHCHHCSEEEE-
T ss_pred HhhccccCCCceEEEEEeCCCCccchHHHHHHHHHHHHhcCCeEeEecCCCCCCchHHHHHHHHhhcCCceeec
Confidence 5532 12235555544222 1222233333333 678899644 5566678888888888777889987
No 59
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=89.91 E-value=2.7 Score=41.44 Aligned_cols=97 Identities=19% Similarity=0.052 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-CccCcccccccCCccccCCCcccccCCCCccccCC
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 609 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~G 609 (670)
..|++-+.+.++..++.+.++| |++-.||...+...+.+.|.. +.+.+--+.| .+ ...|. ..+ ++.+|++|
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~g~~~~~~~~~v~~g--~~-~~~~h---~~~-~~~~l~~g 74 (208)
T cd01092 3 LLRKAARIADKAFEELLEFIKP-GMTEREVAAELEYFMRKLGAEGPSFDTIVASG--PN-SALPH---GVP-SDRKIEEG 74 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCCcEEEEC--cc-ccccC---CCC-CCcCcCCC
Confidence 4677888888888889999999 999999999999999888863 3333323333 11 11222 111 46789999
Q ss_pred CEEEECceeeecCcceEEEEEEEEEec
Q 005915 610 MIVSNEPGYYEDHAFGIRIENLLYVKE 636 (670)
Q Consensus 610 MV~siEPgiy~~~~~GvriED~v~Vte 636 (670)
.++.++.|....+ +-.-+..|++|.+
T Consensus 75 d~v~id~g~~~~g-y~~d~~RT~~~g~ 100 (208)
T cd01092 75 DLVLIDFGAIYDG-YCSDITRTVAVGE 100 (208)
T ss_pred CEEEEEeeeeECC-EeccceeEEECCC
Confidence 9999998875443 3555678888864
No 60
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=89.42 E-value=1.9 Score=43.92 Aligned_cols=94 Identities=17% Similarity=0.113 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCCccCcccccccCCccc-cCCCcccccCCCCccccCC
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVH-EGPQSISFRYGNMTPLVEG 609 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~~h~~GHgiG~~l~~h-E~P~~i~~~~~~~~~L~~G 609 (670)
..+++-+.+.++..++.+.++| |++-.||...+...+.+.|... ..+..|+ ...+ ..|. ..+ ++.+|++|
T Consensus 3 ~lr~A~~i~~~~~~~~~~~i~p-G~tE~ei~~~~~~~~~~~G~~~--~~~~~v~--~g~~~~~~H---~~~-~~~~l~~G 73 (243)
T cd01087 3 LMRKACDISAEAHRAAMKASRP-GMSEYELEAEFEYEFRSRGARL--AYSYIVA--AGSNAAILH---YVH-NDQPLKDG 73 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHHcCCCc--CCCCeEE--ECCCccccC---CCc-CCCcCCCC
Confidence 4678888889999999999999 9999999999999999988651 1122222 1111 1222 111 46789999
Q ss_pred CEEEECceeeecCcceEEEEEEEEE
Q 005915 610 MIVSNEPGYYEDHAFGIRIENLLYV 634 (670)
Q Consensus 610 MV~siEPgiy~~~~~GvriED~v~V 634 (670)
.++.++.+....+ +-.-+.-|+.|
T Consensus 74 d~v~vD~g~~~~G-Y~ad~~Rt~~v 97 (243)
T cd01087 74 DLVLIDAGAEYGG-YASDITRTFPV 97 (243)
T ss_pred CEEEEEeCceECC-EeeeeeEEEEe
Confidence 9999998876553 34556677766
No 61
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=88.60 E-value=2.3 Score=41.95 Aligned_cols=95 Identities=19% Similarity=0.141 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHH-HHHcCCC-CccCcccccccCCccccC-CCcccccCCCCcccc
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSS-LWKIGLD-YRHGTGHGVGAALNVHEG-PQSISFRYGNMTPLV 607 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~-l~~~G~~-~~h~~GHgiG~~l~~hE~-P~~i~~~~~~~~~L~ 607 (670)
..|++.+.+.++..++.+.++| |++-.||.+.+.+. +.+.|.. ..+..-=+.| .+.. |. +.+ ++..|+
T Consensus 2 ~~R~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g----~~~~~~~---~~~-~~~~l~ 72 (207)
T PF00557_consen 2 CMRKAARIADAAMEAAMEALRP-GMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSG----PNTDLPH---YTP-TDRRLQ 72 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHST-TCBHHHHHHHHHHHHHHHTTTTEESSESEEEEC----CCCGETT---TBC-CSSBES
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHHcCCCcccCCceEecC----Ccceecc---eec-cceeee
Confidence 4688889999999999999999 99999999999987 6777742 2222111222 1111 22 112 577899
Q ss_pred CCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 608 EGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 608 ~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
+|+++.++-+....+ +-.-+.-|+++.
T Consensus 73 ~gd~v~id~~~~~~g-y~~d~~Rt~~~G 99 (207)
T PF00557_consen 73 EGDIVIIDFGPRYDG-YHADIARTFVVG 99 (207)
T ss_dssp TTEEEEEEEEEEETT-EEEEEEEEEESS
T ss_pred cCCcceeeccceeee-eEeeeeeEEEEe
Confidence 999999998876554 455677777663
No 62
>PRK12897 methionine aminopeptidase; Reviewed
Probab=87.69 E-value=5.5 Score=40.83 Aligned_cols=95 Identities=17% Similarity=0.014 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCC-----ccC-cccccccCCccccCCCcccccCCCCcc
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY-----RHG-TGHGVGAALNVHEGPQSISFRYGNMTP 605 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~-----~h~-~GHgiG~~l~~hE~P~~i~~~~~~~~~ 605 (670)
.|++-+.+.+++.++.+.++| |++-.||...+...+.+.|... ... .....| .+. ..|+.. + ++.+
T Consensus 13 ~r~A~~i~~~~~~~~~~~~~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g--~n~-~~~H~~---p-~~~~ 84 (248)
T PRK12897 13 MHESGKLLASCHREIAKIMKP-GITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICAS--VND-EMCHAF---P-ADVP 84 (248)
T ss_pred HHHHHHHHHHHHHHHHhhcCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEec--cCC-EeecCC---C-CCcc
Confidence 345666667778888889999 9999999999999999988641 110 111122 110 012111 1 4678
Q ss_pred ccCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 606 LVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 606 L~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
|++|.++.++-|.-..+ +..-+.-|+.|.
T Consensus 85 l~~Gd~V~iD~g~~~~G-Y~sD~tRT~~vG 113 (248)
T PRK12897 85 LTEGDIVTIDMVVNLNG-GLSDSAWTYRVG 113 (248)
T ss_pred cCCCCEEEEEeeEEECC-EEEEEEEEEEcC
Confidence 99999999998865443 345667777774
No 63
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=87.66 E-value=5.5 Score=44.65 Aligned_cols=90 Identities=18% Similarity=0.070 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHH----HHcCC----CCccCcccccccCCc---cccCCCcccccCC
Q 005915 533 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSL----WKIGL----DYRHGTGHGVGAALN---VHEGPQSISFRYG 601 (670)
Q Consensus 533 ~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l----~~~G~----~~~h~~GHgiG~~l~---~hE~P~~i~~~~~ 601 (670)
+++-+++.++..++.+.++| |++..||...+...+ .+.|. .|+. +++ ++ .|-.|. ++
T Consensus 162 R~AaeIa~~vl~~~~~~Ikp-G~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt----~vS--~N~~aaH~tP~-----~g 229 (470)
T PTZ00053 162 RRAAEVHRQVRRYAQSVIKP-GVKLIDICERIESKSRELIEADGLKCGWAFPT----GCS--LNHCAAHYTPN-----TG 229 (470)
T ss_pred HHHHHHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHHHHHhcCCcccCCCCc----eee--cCccccCCCCC-----CC
Confidence 44444555667777888999 999998887665544 33344 2322 333 32 233332 23
Q ss_pred CCccccCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 602 NMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 602 ~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
++.+|+.|.++.|..|....|. -.-+.-|+.+.
T Consensus 230 d~~vLk~GDvVkID~G~~vdGY-iaD~ArTv~vg 262 (470)
T PTZ00053 230 DKTVLTYDDVCKLDFGTHVNGR-IIDCAFTVAFN 262 (470)
T ss_pred CCcEecCCCeEEEEEeEEECCE-EEeEEEEEEeC
Confidence 5689999999999999887764 34445566653
No 64
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=85.92 E-value=6.9 Score=39.93 Aligned_cols=96 Identities=17% Similarity=0.067 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-Ccc-Ccc----cccccCCccccCCCcccccCCCCcc
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH-GTG----HGVGAALNVHEGPQSISFRYGNMTP 605 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~-~~h-~~G----HgiG~~l~~hE~P~~i~~~~~~~~~ 605 (670)
.|++.+.+.++..++.++++| |++-.||...++..+.+.|.. ..+ ..+ .+.| .+ ...|+ ..+ ++.+
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~n-~~~~H---~~~-~~~~ 83 (247)
T TIGR00500 12 IRKAGRLAAEVLEELEREVKP-GVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCIS--VN-EVVIH---GIP-DKKV 83 (247)
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEec--cc-cEEEe---cCC-CCcc
Confidence 345666666777788888999 999999999999999998853 111 111 1222 11 11121 111 5678
Q ss_pred ccCCCEEEECceeeecCcceEEEEEEEEEec
Q 005915 606 LVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (670)
Q Consensus 606 L~~GMV~siEPgiy~~~~~GvriED~v~Vte 636 (670)
|++|.++.++.|....+ +-.-+.-|++|.+
T Consensus 84 l~~Gd~v~iD~g~~~~g-Y~aD~~RT~~vG~ 113 (247)
T TIGR00500 84 LKDGDIVNIDVGVIYDG-YHGDTAKTFLVGK 113 (247)
T ss_pred cCCCCEEEEEEEEEECC-EEEEEEEEEEcCC
Confidence 99999999998865433 4566777787753
No 65
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=85.86 E-value=5.8 Score=38.50 Aligned_cols=97 Identities=21% Similarity=0.151 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCCccCcccccccCCccccCCCcccccCCCCccccCCC
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGM 610 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GM 610 (670)
..++.-+.+.++..++.+.++| |++-.|+...++..+.+.|..+.+.+-=+.| -+ ...|. ..+ ++.++++|.
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~g~~~~~~~~v~~g--~~-~~~~h---~~~-~~~~i~~gd 74 (207)
T cd01066 3 RLRKAAEIAEAAMAAAAEAIRP-GVTEAEVAAAIEQALRAAGGYPAGPTIVGSG--AR-TALPH---YRP-DDRRLQEGD 74 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCcEEEEC--cc-ccCcC---CCC-CCCCcCCCC
Confidence 4677888888999999999999 9999999999999999988733332222223 10 01121 111 357999999
Q ss_pred EEEECceeeecCcceEEEEEEEEEec
Q 005915 611 IVSNEPGYYEDHAFGIRIENLLYVKE 636 (670)
Q Consensus 611 V~siEPgiy~~~~~GvriED~v~Vte 636 (670)
++.++.|....+ +-.-+..++++.+
T Consensus 75 ~v~~d~g~~~~g-y~~d~~rt~~~g~ 99 (207)
T cd01066 75 LVLVDLGGVYDG-YHADLTRTFVIGE 99 (207)
T ss_pred EEEEEeceeECC-CccceeceeEcCC
Confidence 999998876553 3455677777754
No 66
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=85.59 E-value=7.8 Score=39.23 Aligned_cols=96 Identities=14% Similarity=0.054 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCC---CCccCccc----ccccCCccccCCCcccccCCCC
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL---DYRHGTGH----GVGAALNVHEGPQSISFRYGNM 603 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~---~~~h~~GH----giG~~l~~hE~P~~i~~~~~~~ 603 (670)
..|++-+.+.+++.++.+.++| |++-.||.+.+...+.+.|- .+.+..+. ..| .+ ...|+.. .++
T Consensus 3 ~ir~Aa~i~d~~~~~~~~~i~p-G~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G--~~-~~~~H~~----~~~ 74 (228)
T cd01090 3 LIRHGARIADIGGAAVVEAIRE-GVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSG--IN-TDGAHNP----VTN 74 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEee--cc-ccccCCC----CCC
Confidence 4677888888999999999999 99999999999888888763 22221110 223 21 1122211 156
Q ss_pred ccccCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 604 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 604 ~~L~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
..|++|.++.++.+....+ +-.-++-|++|.
T Consensus 75 r~l~~GD~v~~d~g~~~~G-Y~ad~~RT~~vG 105 (228)
T cd01090 75 RKVQRGDILSLNCFPMIAG-YYTALERTLFLD 105 (228)
T ss_pred cccCCCCEEEEEEeEEECC-EeeeeEEEEECC
Confidence 7999999999998865554 345566777764
No 67
>PRK07281 methionine aminopeptidase; Reviewed
Probab=85.23 E-value=6.8 Score=41.21 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCC-ccC-cc------cccccCCccccCCCcccccCCCC
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY-RHG-TG------HGVGAALNVHEGPQSISFRYGNM 603 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~-~h~-~G------HgiG~~l~~hE~P~~i~~~~~~~ 603 (670)
.|++-+.+.+++.++.+.++| |++-.||.+.++..+.+.|... .++ .| +-++.-.+ ..-|+.+ + ++
T Consensus 13 mr~A~~i~~~~~~~~~~~i~p-G~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n-~~~~H~~---p-~~ 86 (286)
T PRK07281 13 MDRAGDFLASIHIGLRDLIKP-GVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLN-DEVAHAF---P-RH 86 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEecc-ccccCCC---C-CC
Confidence 355666667788888889999 9999999999999999887521 111 11 11110011 1122211 1 56
Q ss_pred ccccCCCEEEECcee
Q 005915 604 TPLVEGMIVSNEPGY 618 (670)
Q Consensus 604 ~~L~~GMV~siEPgi 618 (670)
..|++|.++.++-|.
T Consensus 87 ~~l~~Gd~v~iD~g~ 101 (286)
T PRK07281 87 YILKEGDLLKVDMVL 101 (286)
T ss_pred cCcCCCCEEEEEecc
Confidence 799999999999875
No 68
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=85.02 E-value=11 Score=38.18 Aligned_cols=100 Identities=13% Similarity=0.037 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-Ccc--Cccccccc--CCc-----cccCCCcccccC
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH--GTGHGVGA--ALN-----VHEGPQSISFRY 600 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~-~~h--~~GHgiG~--~l~-----~hE~P~~i~~~~ 600 (670)
..|++-+.+.++++++.+.++| |++-.||...+.+.+.+..-. +.. ....+++. .+. .|-.|. . .
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~p-G~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~-~---~ 77 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVP-GAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPL-K---S 77 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCC-C---C
Confidence 5678888899999999999999 999999988877777763221 111 11112220 011 122221 0 0
Q ss_pred CCCccccCCCEEEECceeeecCcceEEEEEEEEEec
Q 005915 601 GNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (670)
Q Consensus 601 ~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte 636 (670)
.++.+|++|.++.++.|....|. -.-+.-|++|.+
T Consensus 78 ~~~~~l~~Gd~v~iD~g~~~~GY-~sD~tRT~~vG~ 112 (228)
T cd01089 78 DATYTLKDGDVVKIDLGCHIDGY-IAVVAHTIVVGA 112 (228)
T ss_pred CCCcccCCCCEEEEEEEEEECCE-EEEEEEEEEeCC
Confidence 25678999999999999877654 566788888864
No 69
>PRK12318 methionine aminopeptidase; Provisional
Probab=84.98 E-value=9.2 Score=40.34 Aligned_cols=95 Identities=15% Similarity=0.037 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-----Ccc-CcccccccCCcccc-CCCcccccCCCCcc
Q 005915 533 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-----YRH-GTGHGVGAALNVHE-GPQSISFRYGNMTP 605 (670)
Q Consensus 533 ~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~-----~~h-~~GHgiG~~l~~hE-~P~~i~~~~~~~~~ 605 (670)
|++-+.+.+++.++.++++| |++-.||..+++..+.+.|.. +.. .....+. ...++ -|+ . ..++.+
T Consensus 53 R~Aa~I~~~a~~a~~~~irp-G~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~--~g~n~~~~H---~-~p~~~~ 125 (291)
T PRK12318 53 RKACQVTARILDALCEAAKE-GVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTIC--TSLNEVICH---G-IPNDIP 125 (291)
T ss_pred HHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceE--eeccceeec---C-CCCCCc
Confidence 45666666778888899999 999999999888888877742 110 0111111 11111 111 0 115679
Q ss_pred ccCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 606 LVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 606 L~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
|++|.++.++.|....| +..-+.-|++|.
T Consensus 126 l~~GD~V~vD~g~~~~G-Y~aDitRT~~vG 154 (291)
T PRK12318 126 LKNGDIMNIDVSCIVDG-YYGDCSRMVMIG 154 (291)
T ss_pred cCCCCEEEEEEeEEECc-EEEEEEEEEECC
Confidence 99999999999876543 456677888774
No 70
>PRK15173 peptidase; Provisional
Probab=77.10 E-value=4.2 Score=43.60 Aligned_cols=54 Identities=13% Similarity=0.240 Sum_probs=42.4
Q ss_pred CCCHHHHHHhhc----CCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhh
Q 005915 172 VPTTFEWLNDVL----APGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWK 229 (670)
Q Consensus 172 ~~~~~~~l~~~~----~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~ 229 (670)
.+.+.+.|++.+ ...++||+|.+.+|+..++.|++.++. +++++. .+++++++.
T Consensus 37 ~~~~~~~l~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~l~~--~~~~d~--~~~i~~lR~ 94 (323)
T PRK15173 37 IESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVIDAVMPN--VDFVDS--SSIFNELRV 94 (323)
T ss_pred HHHHHHHHHHHHHHcCccCCEEEEecCccCHHHHHHHHhhCCC--CeEEEh--HHHHHHHHc
Confidence 444555555533 244799999999999999999999875 689998 999999973
No 71
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=76.45 E-value=19 Score=36.88 Aligned_cols=97 Identities=16% Similarity=0.084 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCC-CCCCCceeEe--eCCCCccccccC---CCCC
Q 005915 421 MLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGF-LDTSFDTISG--SGANGAIIHYKP---EPGK 494 (670)
Q Consensus 421 ~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~-~~~~f~~iv~--sG~~~a~~h~~p---~~~~ 494 (670)
.|++..+..++..++++.+ +||++-.|+...+.++..+ .|. ....|..-++ .|-. .|-.| ++.+
T Consensus 121 ~~~~y~~~~~a~~~~i~~l------kpG~~~~dv~~~a~~~i~~-~~~~~~~~~~~~~GHgiGle---~hE~~~~l~~~~ 190 (243)
T cd01091 121 QQKNYNFLLALQEEILKEL------KPGAKLSDVYQKTLDYIKK-KKPELEPNFTKNLGFGIGLE---FRESSLIINAKN 190 (243)
T ss_pred HHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHHHH-hChhHHHhCcCCcccccCcc---cccCccccCCCC
Confidence 4445555566666666666 9999999999988876543 221 1111211111 1211 11111 1223
Q ss_pred CcccCCCCeEEEeccee-E----------CCeecceEEEEEcCC
Q 005915 495 CSVVDSKKLFLLDSGAQ-Y----------VDGTTDITRTVHFGE 527 (670)
Q Consensus 495 ~~~i~~Gd~v~iD~g~~-~----------~gY~sD~tRT~~vG~ 527 (670)
+.+|++|.++.+..|.. + ..|..-++-|++|.+
T Consensus 191 ~~~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 191 DRKLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CCCcCCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 57899999999999975 2 246677888998854
No 72
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=75.65 E-value=2 Score=39.75 Aligned_cols=64 Identities=19% Similarity=0.302 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhcCCCCCccEEEEcCCCCC-C---ccccccccccceEecCCcCCceEEEE-eC--CCcEEEEccc
Q 005915 82 DEKLRALRELFSRPGVNIDAYIIPSQDAH-Q---SEFIAECYMRRAYISGFTGSAGTAVV-TK--DKAALWTDGR 149 (670)
Q Consensus 82 ~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h-~---se~~~~~~~ni~YlTGF~gs~g~lvv-~~--~~~~L~td~r 149 (670)
.+|.++|.+.|.+ .+ ++||.+.++. . .+|.=.++.|-+||||+.-..+++|+ .. ++.+||++.+
T Consensus 7 ~~RR~~l~~~l~~--~~--~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~~~lvl~~~~~~~~~LF~~~~ 77 (134)
T PF05195_consen 7 AERRKKLAEKLPD--NS--IVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPDAVLVLKDGESGKSTLFVPPK 77 (134)
T ss_dssp HHHHHHHHHHSHS--SE--EEEEE----EEEETTEEE-----HHHHHHH---STT-EEEEEECTTEEEEEEE---
T ss_pred HHHHHHHHHhcCC--Cc--EEEEECCCeeeecCCCccccccCCcEEEEeCCCCCCEEEEEecCCCCeEEEEeCCC
Confidence 5789999999986 32 5555554322 1 25666777899999999988888887 32 3788998744
No 73
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=74.63 E-value=6.6 Score=37.69 Aligned_cols=57 Identities=18% Similarity=0.313 Sum_probs=42.6
Q ss_pred chhHHHHHHHHHHHHHHcC------CCEEEEcCcc----c--------ccccccccccCCCCCceeeEEEEEeCCceEEE
Q 005915 249 GLDVASKLSSLRSDLVDAG------SSAIVISMLD----E--------IAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLF 310 (670)
Q Consensus 249 ~~e~~~Rl~rlr~~M~e~g------lDallis~~~----n--------i~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lf 310 (670)
...|.+|+++|.+..++.. +|+++|..+. + -.||+||.-.+ ..+++++++.+++
T Consensus 3 ~~~F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~~e~~~Y~Ks~aLq~WLlGYEfpd--------Tiiv~tk~~i~~l 74 (163)
T PF14826_consen 3 KETFHKRLKRLYSSWKEHKDDLWGGADALVIAVGKADEDNPYSKSTALQTWLLGYEFPD--------TIIVFTKKKIHFL 74 (163)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S--TTSTT-HHHHHHHHHHSS--SS--------EEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHhccCccccCCCCEEEEEeCCcccCccchhHHHHHHHHhcccHhh--------hhhhhcCCEEEEE
Confidence 4568899999999999886 8999986653 2 46999986433 6778899999999
Q ss_pred EeC
Q 005915 311 VDD 313 (670)
Q Consensus 311 vd~ 313 (670)
+..
T Consensus 75 tS~ 77 (163)
T PF14826_consen 75 TSK 77 (163)
T ss_dssp EEH
T ss_pred eCH
Confidence 864
No 74
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=73.53 E-value=17 Score=36.64 Aligned_cols=97 Identities=9% Similarity=-0.049 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCC--CChhHHHHHHHHHHHHcC-C---CCccCcccccccCCccccCCCcccccCCCCc
Q 005915 531 REKECFTRVLQGHIALDQAIFPQS--TPGFVLDAFARSSLWKIG-L---DYRHGTGHGVGAALNVHEGPQSISFRYGNMT 604 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G--~~~~ev~~~a~~~l~~~G-~---~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~ 604 (670)
.+.+.-..+.++++.+.+.++| | ++-.||.+.+.+.+...| + .|...+.=|.-. ...|-.|. +.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~-G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~-~~~H~~p~-----~~~~r 77 (224)
T cd01085 5 AHIRDGVALVEFLAWLEQEVPK-GETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNG-AIVHYSPT-----EESNR 77 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCcc-CcCCCCcC-----cccCc
Confidence 3445555666888888899999 9 899999999988776654 2 122111111110 01222221 11378
Q ss_pred cccCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 605 ~L~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
+|++|.++.++.|....+ +-.-+.-|++|.
T Consensus 78 ~l~~GD~V~iD~g~~~~g-Y~aD~~RT~~vG 107 (224)
T cd01085 78 KISPDGLYLIDSGGQYLD-GTTDITRTVHLG 107 (224)
T ss_pred ccCCCCEEEEEeCccCCC-cccccEEeecCC
Confidence 999999999999876654 344556666664
No 75
>PRK10879 proline aminopeptidase P II; Provisional
Probab=70.58 E-value=38 Score=37.91 Aligned_cols=93 Identities=16% Similarity=0.091 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCCcc-CcccccccCCccccCCCcccccCCCCccccCCCE
Q 005915 533 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRH-GTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMI 611 (670)
Q Consensus 533 ~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~~h-~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV 611 (670)
|++.+.+.+++.++++.++| |++-.+|.+.+...+.+.|..... .+--+.| -+. -.|+.. .++..|++|.+
T Consensus 183 r~A~~i~~~a~~~~~~~~~p-G~tE~ei~a~~~~~~~~~G~~~~~~~~iv~~G--~na-~~~H~~----~~~~~l~~GDl 254 (438)
T PRK10879 183 RRAGEISALAHTRAMEKCRP-GMFEYQLEGEIHHEFNRHGARYPSYNTIVGSG--ENG-CILHYT----ENESEMRDGDL 254 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHHHCCCCCCCCCcEEEEc--Ccc-ccccCC----CCccccCCCCE
Confidence 45555666778888889999 999999999988888888864221 1111222 110 112211 15678999999
Q ss_pred EEECceeeecCcceEEEEEEEEE
Q 005915 612 VSNEPGYYEDHAFGIRIENLLYV 634 (670)
Q Consensus 612 ~siEPgiy~~~~~GvriED~v~V 634 (670)
+.++.|....+ +..-+.-|+.|
T Consensus 255 VliD~G~~~~G-Y~sDitRT~~v 276 (438)
T PRK10879 255 VLIDAGCEYKG-YAGDITRTFPV 276 (438)
T ss_pred EEEEeCeEECC-EEEEeEEEEEE
Confidence 99999876654 45667777777
No 76
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=69.93 E-value=23 Score=36.97 Aligned_cols=82 Identities=22% Similarity=0.227 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCChhHHHH----HHHHHHHHcCCCCccCcccccccCCc---cccCCCcccccCCCCcc
Q 005915 533 KECFTRVLQGHIALDQAIFPQSTPGFVLDA----FARSSLWKIGLDYRHGTGHGVGAALN---VHEGPQSISFRYGNMTP 605 (670)
Q Consensus 533 ~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~----~a~~~l~~~G~~~~h~~GHgiG~~l~---~hE~P~~i~~~~~~~~~ 605 (670)
++..++-+++...+.+-++| |++.-||-. ..|..+.+.|+. .++|...|+.|+ .|-.|. +|+.++
T Consensus 89 rraAE~HRqvR~yv~s~ikP-Gmtm~ei~e~iEnttR~li~e~gl~--aGi~FPtG~SlN~cAAHyTpN-----aGd~tV 160 (397)
T KOG2775|consen 89 RRAAEAHRQVRKYVQSIIKP-GMTMIEICETIENTTRKLILENGLN--AGIGFPTGCSLNHCAAHYTPN-----AGDKTV 160 (397)
T ss_pred HHHHHHHHHHHHHHHHhccC-cccHHHHHHHHHHHHHHHHHhcccc--ccccCCCcccccchhhhcCCC-----CCCcee
Confidence 44444445556677788999 999877655 456666666653 233333332233 243443 568899
Q ss_pred ccCCCEEEECceeeecC
Q 005915 606 LVEGMIVSNEPGYYEDH 622 (670)
Q Consensus 606 L~~GMV~siEPgiy~~~ 622 (670)
|+.+.|.-|.-|....|
T Consensus 161 LqydDV~KiDfGthi~G 177 (397)
T KOG2775|consen 161 LKYDDVMKIDFGTHIDG 177 (397)
T ss_pred eeecceEEEeccccccC
Confidence 99999999998877654
No 77
>PF00486 Trans_reg_C: Transcriptional regulatory protein, C terminal; InterPro: IPR001867 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain that is almost always found associated with the response regulator receiver domain (see IPR001789 from INTERPRO). It may play a role in DNA binding [].; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2K4J_A 2JPB_A 1ODD_A 1OPC_A 1KGS_A 2PMU_E 2JZY_A 1GXP_B 1QQI_A 2Z33_A ....
Probab=57.85 E-value=17 Score=29.32 Aligned_cols=58 Identities=19% Similarity=0.345 Sum_probs=40.6
Q ss_pred ccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcCCC
Q 005915 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSS 269 (670)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~glD 269 (670)
+|..+++-|.-.+... -+.++- +.+++.+|+++ + ..+...+...+.+||+.|++.+.+
T Consensus 6 Lt~~e~~lL~~L~~~~-~~~vs~--~~l~~~~w~~~-~------------~~~~~~l~~~I~rLR~kL~~~~~~ 63 (77)
T PF00486_consen 6 LTPKEFRLLELLLRNP-GRVVSR--EELIEALWGDE-E------------DVSDNSLDVHISRLRKKLEDAGGD 63 (77)
T ss_dssp SSHHHHHHHHHHHHTT-TSEEEH--HHHHHHHTSSS-S------------TTCTHHHHHHHHHHHHHHHSSTTS
T ss_pred cCHHHHHHHHHHHhCC-CCCCCH--HHhCChhhhcc-c------------ccchhhHHHHHHHHHHHHhhcCCC
Confidence 4556666665555443 367787 99999999622 1 345667788999999999987543
No 78
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=51.96 E-value=92 Score=33.54 Aligned_cols=95 Identities=19% Similarity=0.079 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHH--------HH-----cCCCCccC--cccccccCCccccCCCcc
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSL--------WK-----IGLDYRHG--TGHGVGAALNVHEGPQSI 596 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l--------~~-----~G~~~~h~--~GHgiG~~l~~hE~P~~i 596 (670)
.+..-+.+..+....++.+.| |++..||-......+ ++ .|+-|+.. .--.+| |=.|. .
T Consensus 24 Yk~AgeI~n~~lk~V~~~~~~-gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isvnncv~-----h~sPl-k 96 (398)
T KOG2776|consen 24 YKMAGEIVNKVLKSVVELCQP-GASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISVNNCVC-----HFSPL-K 96 (398)
T ss_pred hhhHHHHHHHHHHHHHHHhcC-CchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecccceee-----ccCcC-C
Confidence 455556777788888899999 999988866544433 22 23333321 122222 22343 2
Q ss_pred cccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecC
Q 005915 597 SFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (670)
Q Consensus 597 ~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~ 637 (670)
+ ..+..|++|.|+-|..|..++| |-.-+..|++|++.
T Consensus 97 s---d~~~~Lk~GDvVKIdLG~HiDG-fiA~vaHT~VV~~~ 133 (398)
T KOG2776|consen 97 S---DADYTLKEGDVVKIDLGVHIDG-FIALVAHTIVVGPA 133 (398)
T ss_pred C---CCcccccCCCEEEEEeeeeecc-ceeeeeeeEEeccC
Confidence 1 2478999999999999999886 46668999999875
No 79
>cd00383 trans_reg_C Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and a response regulator. The former autophosphorylates in a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. The C-terminal effector domain contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunite of RNA polymerase.
Probab=37.41 E-value=58 Score=27.30 Aligned_cols=58 Identities=19% Similarity=0.249 Sum_probs=37.4
Q ss_pred ccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcCCC
Q 005915 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSS 269 (670)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~glD 269 (670)
+|-.+++-|.-.+... .+.++- ..+++.+|+ +.+. .+...+...+.+||+.|.+.+..
T Consensus 24 Lt~~e~~lL~~L~~~~-~~~vs~--~~l~~~lw~-~~~~------------~~~~~l~~~I~rLRkkl~~~~~~ 81 (95)
T cd00383 24 LTPKEFELLELLARNP-GRVLSR--EQLLEAVWG-DDYD------------VDDRTVDVHISRLRKKLEDDPSN 81 (95)
T ss_pred eCHHHHHHHHHHHhCC-CCcCCH--HHHHHHhcC-CCCC------------CCcccHHHHHHHHHHHhccCCCC
Confidence 4555565555444443 367776 999999995 2221 12244677899999999876643
No 80
>smart00862 Trans_reg_C Transcriptional regulatory protein, C terminal. This domain is almost always found associated with the response regulator receiver domain. It may play a role in DNA binding.
Probab=36.00 E-value=66 Score=25.78 Aligned_cols=58 Identities=17% Similarity=0.274 Sum_probs=36.4
Q ss_pred ccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcCC
Q 005915 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (670)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~gl 268 (670)
+|...++-|.-.+... .+.++- +.+++.+|+ .++ ..-+...+...+.+||+.|.+.+.
T Consensus 6 Lt~~e~~lL~~L~~~~-~~~vs~--~~l~~~lw~-~~~-----------~~~~~~~l~~~i~~LR~~l~~~~~ 63 (78)
T smart00862 6 LTPKEFRLLELLLRNP-GRVVSR--EELLEAVWG-DDD-----------DDVDDNTLDVHISRLRKKLEDDGA 63 (78)
T ss_pred cCHHHHHHHHHHHhCC-CCccCH--HHHHHHHcC-CCC-----------CCCccchHHHHHHHHHHHHhcCCC
Confidence 4556666443333333 356676 899999995 222 011235577899999999987654
No 81
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=35.69 E-value=79 Score=34.65 Aligned_cols=68 Identities=16% Similarity=0.118 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHhcCCCCCccEEEEcC-CCCCCc---cccccccccceEecCCcCCceEEEEeC-C----CcEEEEccc
Q 005915 79 DAPDEKLRALRELFSRPGVNIDAYIIPS-QDAHQS---EFIAECYMRRAYISGFTGSAGTAVVTK-D----KAALWTDGR 149 (670)
Q Consensus 79 ~~~~~Rl~~lr~~m~~~~~~lDa~lI~~-~d~h~s---e~~~~~~~ni~YlTGF~gs~g~lvv~~-~----~~~L~td~r 149 (670)
....+|..+|-+.+.+ +. .+||.+ |--|+| -|.=.++.|.+||||+.-.++++++.. + ...||.++.
T Consensus 65 ~Ey~~RR~rl~~ll~~--~a--~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP~~vl~l~~~d~~s~~~~lf~p~k 140 (488)
T KOG2414|consen 65 TEYKERRSRLMSLLPA--NA--MVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEPDAVLLLLKGDERSVAYDLFMPPK 140 (488)
T ss_pred HHHHHHHHHHHHhCCc--cc--EEEEccCchhhhcCccceeeecCCCeEEEeccCCCCeeEEEeecccccceeeEecCCC
Confidence 4567899999999998 53 444444 333444 355567789999999998888887742 2 245677665
Q ss_pred c
Q 005915 150 Y 150 (670)
Q Consensus 150 y 150 (670)
.
T Consensus 141 d 141 (488)
T KOG2414|consen 141 D 141 (488)
T ss_pred C
Confidence 4
No 82
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=32.23 E-value=2.4e+02 Score=33.53 Aligned_cols=105 Identities=15% Similarity=0.178 Sum_probs=67.7
Q ss_pred eEecCCcCCceEEEEeCCCcEEEEccccHHHHHh--------hccCceEEEEc-CCCCCCCHHHHHHhhcC-CCCeEEE-
Q 005915 123 AYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEK--------QLSSSWILMRS-GNHGVPTTFEWLNDVLA-PGGRVGI- 191 (670)
Q Consensus 123 ~YlTGF~gs~g~lvv~~~~~~L~td~ry~~qa~~--------~~~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~vg~- 191 (670)
-||-||--.+.++|+.+++-+++|-..=.+-.++ +....+.+... ...+.....+-|-+.+. .+++||+
T Consensus 21 ~WLlGYEfpdTilv~~~~~i~iltSkkKa~~l~~~~~~~~~~~~~~~v~llvR~k~d~n~~~fdkii~~ik~~gk~vGvf 100 (960)
T KOG1189|consen 21 TWLLGYEFPDTILVLCKDKIYILTSKKKAEFLQKVTNLAQSSEGKPTVNLLVRDKNDDNKGLFDKIIKAIKSAGKKVGVF 100 (960)
T ss_pred HHHhccccCceEEEEecCcEEEEecchhHHHHHhhcccccCcccCcceEEEecccCccccccHHHHHHHHHhcCCeeeee
Confidence 4888988777778888888888886553322222 11112444333 22223343444444443 5688884
Q ss_pred cCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhh
Q 005915 192 DPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWK 229 (670)
Q Consensus 192 e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~ 229 (670)
..+.+.-.+.+.+.+.|...+.+.+++ +.-+..+|.
T Consensus 101 ~ke~~~G~F~~~W~~~l~~~~fn~vDi--s~~ls~l~a 136 (960)
T KOG1189|consen 101 AKEKFQGEFMESWNKRLEAGGFNKVDI--SLGLSKLFA 136 (960)
T ss_pred cccccchhHHHHHHHHhhhcCCceeeh--hhhhhhhee
Confidence 557788889999999998877888998 777888885
No 83
>TIGR00035 asp_race aspartate racemase.
Probab=30.51 E-value=4.7e+02 Score=26.17 Aligned_cols=25 Identities=20% Similarity=0.291 Sum_probs=19.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcC
Q 005915 80 APDEKLRALRELFSRPGVNIDAYIIPS 106 (670)
Q Consensus 80 ~~~~Rl~~lr~~m~~~~~~lDa~lI~~ 106 (670)
+....+.+.-+.|++ .++|+++|+-
T Consensus 59 ~~~~~l~~~~~~L~~--~g~d~iviaC 83 (229)
T TIGR00035 59 RPRPILIDIAVKLEN--AGADFIIMPC 83 (229)
T ss_pred hHHHHHHHHHHHHHH--cCCCEEEECC
Confidence 455677777888888 8999999964
No 84
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.38 E-value=1.7e+02 Score=29.89 Aligned_cols=124 Identities=19% Similarity=0.214 Sum_probs=69.2
Q ss_pred CCCcccccCCCCCHHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCceEE---------EEe
Q 005915 68 PSSEFNRNRTQDAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTA---------VVT 138 (670)
Q Consensus 68 ~~~~~~~~~~~~~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g~l---------vv~ 138 (670)
|..+..+-...|...+...+|++.|++ - .+..++.++.||--+. =..
T Consensus 92 ~~~e~gtL~~~~s~~e~~~rl~~a~~~--v----------------------~~~~GlnNhmGs~~tsn~~aM~~~m~~L 147 (250)
T COG2861 92 PKIEPGTLRPGMSAEEILRRLRKAMNK--V----------------------PDAVGLNNHMGSRFTSNEDAMEKLMEAL 147 (250)
T ss_pred CCCCCCCcccCCCHHHHHHHHHHHHhh--C----------------------ccceeehhhhhhhhcCcHHHHHHHHHHH
Confidence 444444444468888889999999998 1 1345555555652100 011
Q ss_pred CCCcEEEEccccHHH-----HHhhccCce---EEEEcCCCCCCCHHHHHHhh------c-CCCCeEEEcC-CcccHHHHH
Q 005915 139 KDKAALWTDGRYFLQ-----AEKQLSSSW---ILMRSGNHGVPTTFEWLNDV------L-APGGRVGIDP-FLFSSDAAE 202 (670)
Q Consensus 139 ~~~~~L~td~ry~~q-----a~~~~~~~~---~~~~~~~~~~~~~~~~l~~~------~-~~~~~vg~e~-~~~s~~~~~ 202 (670)
+..-.+|.|++=--+ ..++....+ .+..+ +..+..+.+++. . ..+..||+=. .--|++..+
T Consensus 148 k~r~l~flDs~T~a~S~a~~iAk~~gVp~~~rdvfLD---~e~~~~~V~kql~~~~~~Ark~G~ai~IGh~~~~Tv~vl~ 224 (250)
T COG2861 148 KERGLYFLDSGTIANSLAGKIAKEIGVPVIKRDVFLD---DEDTEAAVLKQLDAAEKLARKNGSAIGIGHPHKNTVAVLQ 224 (250)
T ss_pred HHCCeEEEcccccccchhhhhHhhcCCceeeeeeeec---CcCCHHHHHHHHHHHHHHHHhcCceEEecCCchhHHHHHH
Confidence 334567777775443 222222211 22222 233433333321 1 2455566543 446899999
Q ss_pred HHHHHHhcCCcEEEEc
Q 005915 203 ELKEAIAKKNHELVYL 218 (670)
Q Consensus 203 ~L~~~l~~~~~~lv~~ 218 (670)
+....|+..+++||++
T Consensus 225 ~~~~~l~~~gIelV~~ 240 (250)
T COG2861 225 QWLDELPARGIELVPV 240 (250)
T ss_pred HHHHhCCCCCeEEecH
Confidence 9999998778999997
No 85
>PRK00865 glutamate racemase; Provisional
Probab=27.12 E-value=1.4e+02 Score=30.76 Aligned_cols=70 Identities=11% Similarity=0.225 Sum_probs=48.8
Q ss_pred CeEE-EcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHH
Q 005915 187 GRVG-IDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVD 265 (670)
Q Consensus 187 ~~vg-~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e 265 (670)
..|| ||+-.=-...+++|++.+|+. .++.+ .+.-.--+| .-+.++..++..++.+.|.+
T Consensus 6 ~~IgvfDSGiGGLtvl~~i~~~lp~~--~~iY~--~D~~~~PYG----------------~ks~~~i~~~~~~~~~~L~~ 65 (261)
T PRK00865 6 APIGVFDSGVGGLTVLREIRRLLPDE--HIIYV--GDTARFPYG----------------EKSEEEIRERTLEIVEFLLE 65 (261)
T ss_pred CeEEEEECCccHHHHHHHHHHHCCCC--CEEEE--ecCCCCCCC----------------CCCHHHHHHHHHHHHHHHHh
Confidence 3476 788776778899999999874 66665 322111111 12556777888889999999
Q ss_pred cCCCEEEEcCc
Q 005915 266 AGSSAIVISML 276 (670)
Q Consensus 266 ~glDallis~~ 276 (670)
.|+|+++|.-.
T Consensus 66 ~g~d~iVIaCN 76 (261)
T PRK00865 66 YGVKMLVIACN 76 (261)
T ss_pred CCCCEEEEeCc
Confidence 99999888653
No 86
>COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism]
Probab=26.78 E-value=6.2e+02 Score=24.98 Aligned_cols=120 Identities=13% Similarity=0.135 Sum_probs=73.4
Q ss_pred CCCcEEEEccccHHHHHhhccC-ceEEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEE
Q 005915 139 KDKAALWTDGRYFLQAEKQLSS-SWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVY 217 (670)
Q Consensus 139 ~~~~~L~td~ry~~qa~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~ 217 (670)
++..+.|++...+++.-++-.- .|.-+... .+.+..+++.+.+..|+.|=+| +.+.-+.++++..++. ..+=
T Consensus 47 ~G~dY~Fvs~~EF~~~i~~~~fLE~a~~~gn--yYGT~~~~ve~~~~~G~~vild---Id~qGa~qvk~~~p~~--v~IF 119 (191)
T COG0194 47 DGVDYFFVTEEEFEELIERDEFLEWAEYHGN--YYGTSREPVEQALAEGKDVILD---IDVQGALQVKKKMPNA--VSIF 119 (191)
T ss_pred CCceeEeCCHHHHHHHHhcCCcEEEEEEcCC--cccCcHHHHHHHHhcCCeEEEE---EehHHHHHHHHhCCCe--EEEE
Confidence 3456888888888887655321 14333333 3566778888877778888888 6789999999998753 3322
Q ss_pred cccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcC-CCEEEEcCc
Q 005915 218 LYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAG-SSAIVISML 276 (670)
Q Consensus 218 ~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~g-lDallis~~ 276 (670)
+ ..+-.++|-. |-..- -.=+.+..+.|+++.++.|.... .|-+++.+.
T Consensus 120 i-~pPs~eeL~~--RL~~R--------gtds~e~I~~Rl~~a~~Ei~~~~~fdyvivNdd 168 (191)
T COG0194 120 I-LPPSLEELER--RLKGR--------GTDSEEVIARRLENAKKEISHADEFDYVIVNDD 168 (191)
T ss_pred E-cCCCHHHHHH--HHHcc--------CCCCHHHHHHHHHHHHHHHHHHHhCCEEEECcc
Confidence 2 1333344411 11100 11244567889999999887643 666665543
No 87
>TIGR03241 arg_catab_astB succinylarginine dihydrolase. Members of this family are succinylarginine dihydrolase (EC 3.5.3.23), the second of five enzymes in the arginine succinyltransferase (AST) pathway.
Probab=25.96 E-value=2.1e+02 Score=31.40 Aligned_cols=52 Identities=23% Similarity=0.349 Sum_probs=42.5
Q ss_pred CCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHH
Q 005915 403 TSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVAD 456 (670)
Q Consensus 403 ~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~ 456 (670)
.+..-++|.+-+++|++.+-.+..++++-+...-.|++..- +.-++..|++.
T Consensus 365 GPACLRLRVvl~~~E~~Avnp~~lm~~~l~~~L~~wV~~hY--RdrL~~~DLaD 416 (443)
T TIGR03241 365 GPACLRLRVVLNDAELAAVNPAVMMNDALFATLNAWVDRHY--RDRLSAADLAD 416 (443)
T ss_pred CceeeeeeeeCCHHHHhhcCcceecCHHHHHHHHHHHHHhc--cccCChhhccC
Confidence 34467899999999999999999999988888888987766 56677777763
No 88
>PF07385 DUF1498: Protein of unknown function (DUF1498); InterPro: IPR010864 This family consists of several hypothetical bacterial proteins of around 225 residues in length. The function of this family is unknown.; PDB: 3MPB_B 3KMH_A.
Probab=25.51 E-value=66 Score=32.31 Aligned_cols=44 Identities=27% Similarity=0.372 Sum_probs=26.9
Q ss_pred CCCCccccCCCEEEECceeee---cCcceEEEEEEEEEecCCCCCCC
Q 005915 600 YGNMTPLVEGMIVSNEPGYYE---DHAFGIRIENLLYVKEVGTPNRF 643 (670)
Q Consensus 600 ~~~~~~L~~GMV~siEPgiy~---~~~~GvriED~v~Vte~g~~~~~ 643 (670)
++...+|.||.-+|+.|++|- .+.+++-+.+.=.|.+|.+.|.|
T Consensus 152 aG~~l~L~PGESiTL~Pg~yH~Fw~e~g~vLigEVStvNDD~tDN~F 198 (225)
T PF07385_consen 152 AGTQLRLNPGESITLPPGIYHWFWGEGGDVLIGEVSTVNDDNTDNRF 198 (225)
T ss_dssp TT-EEEE-TT-EEEE-TTEEEEEEE-TTSEEEEEEEE---TTTSEEE
T ss_pred CCceEEeCCCCeEeeCCCCeeeEEecCCCEEEEeeecccCCCccccc
Confidence 457789999999999999984 23455777887777777666544
No 89
>COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]
Probab=23.93 E-value=4e+02 Score=29.66 Aligned_cols=67 Identities=16% Similarity=0.163 Sum_probs=41.2
Q ss_pred CCCHHHHHHhhcC--CCCeEEEcCCcccHHHHHHHHHHHhcCCcEE--EEcccchhHHHhhhcCCCCCCCcccccc
Q 005915 172 VPTTFEWLNDVLA--PGGRVGIDPFLFSSDAAEELKEAIAKKNHEL--VYLYDLNLVDVIWKESRPKPPNKPIRVH 243 (670)
Q Consensus 172 ~~~~~~~l~~~~~--~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~l--v~~~~~~lv~~lw~~~rp~~~~~~~~~~ 243 (670)
.++..+++.+.+. .+++|-..++.+|.. -.|.+.|.+.|++. .|+ +.+|=++= .+.|...=.|...+
T Consensus 87 aedA~~ii~~iv~~k~~k~vVKsKSmvseE--Igln~~Le~~G~ev~ETDL--GE~IlQl~-~~~PsHIV~PAlH~ 157 (459)
T COG1139 87 AEDAREIIGEIVGEKNGKKVVKSKSMVSEE--IGLNHYLEEKGIEVWETDL--GELILQLA-GEPPSHIVAPALHK 157 (459)
T ss_pred HHHHHHHHHHHHhhccCcEEEEecchhHHH--hhhHHHHHHcCCeEEEccH--HHHHHHhc-CCCCcceecccccc
Confidence 4566777777665 567887777654443 35677777777775 455 66776664 34454444444443
No 90
>PRK13607 proline dipeptidase; Provisional
Probab=22.21 E-value=3.4e+02 Score=30.47 Aligned_cols=93 Identities=15% Similarity=0.066 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCCccCcccccccCCccc-cCCCcccccCCCCccccCCC
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVH-EGPQSISFRYGNMTPLVEGM 610 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~~h~~GHgiG~~l~~h-E~P~~i~~~~~~~~~L~~GM 610 (670)
.+++-+++.+++.++.++++| |++-.||........ ..|.. ....+.-|+ .+.+ .-|+ +.+.+..++++|.
T Consensus 170 mr~A~~i~~~a~~~~~~~i~p-G~tE~ei~~~~~~~~-~~~~~-~~~y~~iva--~G~naa~~H---~~~~~~~~~~~Gd 241 (443)
T PRK13607 170 MREAQKIAVAGHRAAKEAFRA-GMSEFDINLAYLTAT-GQRDN-DVPYGNIVA--LNEHAAVLH---YTKLDHQAPAEMR 241 (443)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHh-CCCCc-CCCCCcEEE--ecCcceEec---CCccCCCCCCCCC
Confidence 356666677788889999999 999888876543221 11110 001111121 1111 0111 1112334688999
Q ss_pred EEEECceeeecCcceEEEEEEEE
Q 005915 611 IVSNEPGYYEDHAFGIRIENLLY 633 (670)
Q Consensus 611 V~siEPgiy~~~~~GvriED~v~ 633 (670)
++.+.-|....| +..-+.-|+.
T Consensus 242 ~vliD~Ga~~~G-Y~sDiTRTf~ 263 (443)
T PRK13607 242 SFLIDAGAEYNG-YAADITRTYA 263 (443)
T ss_pred EEEEEeeEEECC-EEecceEEEe
Confidence 999998865544 4445566665
No 91
>PF14503 YhfZ_C: YhfZ C-terminal domain; PDB: 2OZZ_B.
Probab=21.84 E-value=2.9e+02 Score=28.12 Aligned_cols=33 Identities=39% Similarity=0.440 Sum_probs=18.6
Q ss_pred CCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEc
Q 005915 184 APGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYL 218 (670)
Q Consensus 184 ~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~ 218 (670)
..+.|||+|++ |.+...--+..++++++++|++
T Consensus 112 ~dGmRVGiD~~--S~Dq~~LT~~~~~gk~Ve~Vei 144 (232)
T PF14503_consen 112 EDGMRVGIDPS--SIDQKILTEAEFEGKNVEFVEI 144 (232)
T ss_dssp ----EEEE-TT---HHHHHHHHHHHTTS--EEEE-
T ss_pred eeeeEeecCCC--CccHHHHHHHHhCCCceEEEEe
Confidence 45689999986 6666665666777777888887
No 92
>PF02602 HEM4: Uroporphyrinogen-III synthase HemD; InterPro: IPR003754 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents uroporphyrinogen III synthase (4.2.1.75 from EC) which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses the inversion of the final pyrrole unit (ring D) of the linear tetrapyrrole molecule, linking it to the first pyrrole unit (ring A), thereby generating a large macrocyclic structure called uroporphyrinogen III []. The enzyme folds into two alpha/beta domains connected by a beta-ladder, the active site being located between the two domains []. Congenital erythropoietic porphyria (CEP) is an autosomal recessive inborn error of metabolism that results from the markedly deficient activity of uroporphyrinogen III synthase []. ; GO: 0004852 uroporphyrinogen-III synthase activity, 0033014 tetrapyrrole biosynthetic process; PDB: 1WD7_B 1WCX_A 1WCW_A 3D8R_A 3D8T_B 3D8S_A 3D8N_A 3RE1_A 3MW8_A 3P9Z_A ....
Probab=20.15 E-value=28 Score=34.73 Aligned_cols=32 Identities=19% Similarity=0.189 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHcCCCEEEEcCccccccccccc
Q 005915 255 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLR 286 (670)
Q Consensus 255 Rl~rlr~~M~e~glDallis~~~ni~YLtGf~ 286 (670)
....+.+.+...++|+++++++..+..|...-
T Consensus 156 ~~~~~~~~l~~~~~~~v~ftS~~~~~~~~~~~ 187 (231)
T PF02602_consen 156 LSPELKEALDRGEIDAVVFTSPSAVRAFLELL 187 (231)
T ss_dssp HHHHHHHHHHHTTTSEEEESSHHHHHHHHHHS
T ss_pred chHHHHHHHHcCCCCEEEECCHHHHHHHHHHh
Confidence 45567788888899999999999988877543
No 93
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=20.12 E-value=3.1e+02 Score=28.48 Aligned_cols=112 Identities=17% Similarity=0.244 Sum_probs=68.1
Q ss_pred HHHHhhccCce-EEEEcCCCCCCCHHHHHHhhcCCCC---eEEEcCC-------cccHHHHHHHHHHHhcCCcEEEEccc
Q 005915 152 LQAEKQLSSSW-ILMRSGNHGVPTTFEWLNDVLAPGG---RVGIDPF-------LFSSDAAEELKEAIAKKNHELVYLYD 220 (670)
Q Consensus 152 ~qa~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~---~vg~e~~-------~~s~~~~~~L~~~l~~~~~~lv~~~~ 220 (670)
.+.+++....+ -.+-.++++.++..+.+.....++. -+||-.+ .|-.+..++|++ |..+..+
T Consensus 9 ~~l~~~~~~a~i~yit~GdP~~e~s~e~i~~L~~~GaD~iELGvPfSDPvADGP~Iq~A~~rAL~~-----g~t~~~~-- 81 (265)
T COG0159 9 AQLKAENRGALIPYVTAGDPDLETSLEIIKTLVEAGADILELGVPFSDPVADGPTIQAAHLRALAA-----GVTLEDT-- 81 (265)
T ss_pred HHHHHhCCCCeEEEEeCCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCcCccCHHHHHHHHHHHHC-----CCCHHHH--
Confidence 34444433333 3355566666666677765444432 2565432 233334444432 3455555
Q ss_pred chhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcCCCEEEEcCc
Q 005915 221 LNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISML 276 (670)
Q Consensus 221 ~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~glDallis~~ 276 (670)
-.+++++| .+.+..|+.. +.|--.-+..=++++-+..++.|+|++|+-+.
T Consensus 82 lel~~~~r----~~~~~~Pivl--m~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDL 131 (265)
T COG0159 82 LELVEEIR----AKGVKVPIVL--MTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDL 131 (265)
T ss_pred HHHHHHHH----hcCCCCCEEE--EEeccHHHHhhHHHHHHHHHHcCCCEEEeCCC
Confidence 67788887 3445566665 45666667778888999999999999999875
Done!