Query 005915
Match_columns 670
No_of_seqs 436 out of 2485
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 10:55:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005915.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005915hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ctz_A XAA-Pro aminopeptidase 100.0 2E-105 8E-110 917.5 48.9 555 79-666 4-574 (623)
2 3q6d_A Proline dipeptidase; st 100.0 1E-67 3.5E-72 570.0 30.7 350 250-663 1-355 (356)
3 4ege_A Dipeptidase PEPE; struc 100.0 9.7E-67 3.3E-71 565.6 33.2 366 239-664 2-376 (378)
4 4fkc_A XAA-Pro aminopeptidase; 100.0 4.5E-66 1.5E-70 561.4 30.1 361 243-663 6-376 (377)
5 2zsg_A Aminopeptidase P, putat 100.0 2.3E-64 8E-69 544.4 32.1 346 254-663 2-358 (359)
6 1wn1_A Dipeptidase; prolidase, 100.0 1.2E-63 4.3E-68 537.7 27.7 345 254-663 1-355 (356)
7 1wy2_A XAA-Pro dipeptidase; st 100.0 8.2E-63 2.8E-67 530.3 32.2 342 253-661 5-350 (351)
8 1kp0_A Creatine amidinohydrola 100.0 1.1E-61 3.8E-66 531.3 32.0 366 244-663 16-397 (402)
9 3biq_A FACT complex subunit SP 100.0 4.9E-60 1.7E-64 528.0 33.3 375 245-666 6-447 (467)
10 4b28_A Metallopeptidase, famil 100.0 8.7E-61 3E-65 530.2 24.8 362 244-665 71-468 (470)
11 1chm_A Creatine amidinohydrola 100.0 2.6E-59 9E-64 512.1 35.0 370 242-663 13-397 (401)
12 3cb6_A FACT complex subunit SP 100.0 1.5E-59 5E-64 521.0 31.8 371 245-667 6-440 (444)
13 2v3z_A XAA-Pro aminopeptidase; 100.0 2.1E-58 7.1E-63 510.1 33.1 369 247-668 3-434 (440)
14 3ig4_A XAA-Pro aminopeptidase; 100.0 2.2E-57 7.7E-62 497.6 33.4 356 248-668 2-412 (427)
15 2iw2_A XAA-Pro dipeptidase; me 100.0 2.3E-53 7.9E-58 475.6 29.2 365 245-668 17-480 (494)
16 3rva_A Organophosphorus acid a 100.0 7.9E-52 2.7E-56 456.2 27.3 351 251-659 11-441 (451)
17 3l24_A XAA-Pro dipeptidase; PI 100.0 4E-50 1.4E-54 446.4 26.9 351 251-660 11-440 (517)
18 3tb5_A Methionine aminopeptida 100.0 5.8E-48 2E-52 398.9 23.1 233 409-666 1-257 (264)
19 3tav_A Methionine aminopeptida 100.0 1.2E-47 4.1E-52 400.7 24.0 235 400-658 20-286 (286)
20 3mx6_A Methionine aminopeptida 100.0 8.9E-48 3.1E-52 396.9 22.7 229 408-662 4-258 (262)
21 3pka_A Methionine aminopeptida 100.0 1E-46 3.4E-51 393.4 23.4 224 408-656 37-284 (285)
22 2gg2_A Methionine aminopeptida 100.0 1.6E-46 5.3E-51 387.9 22.9 231 409-662 1-255 (263)
23 1o0x_A Methionine aminopeptida 100.0 5.4E-46 1.8E-50 383.6 22.7 225 407-656 11-260 (262)
24 3s6b_A Methionine aminopeptida 100.0 4.2E-46 1.4E-50 397.3 22.2 231 408-663 99-357 (368)
25 4fuk_A Methionine aminopeptida 100.0 7.8E-46 2.7E-50 395.3 22.4 242 401-667 52-321 (337)
26 1qxy_A Methionyl aminopeptidas 100.0 1.2E-45 4E-50 379.0 21.0 223 412-660 3-251 (252)
27 2b3h_A Methionine aminopeptida 100.0 3.5E-45 1.2E-49 387.6 23.1 229 408-661 71-325 (329)
28 2q8k_A Proliferation-associate 100.0 1.2E-38 4E-43 346.3 24.6 203 406-619 13-238 (401)
29 1xgs_A Methionine aminopeptida 100.0 2.8E-37 9.6E-42 323.0 21.6 201 416-632 1-203 (295)
30 1b6a_A Methionine aminopeptida 100.0 9.4E-36 3.2E-40 326.5 20.5 199 407-619 153-368 (478)
31 2nw5_A Methionine aminopeptida 100.0 2.2E-35 7.4E-40 315.2 18.7 210 403-628 33-257 (360)
32 3fm3_A Methionine aminopeptida 100.0 1.5E-30 5.3E-35 278.6 21.2 202 405-619 32-247 (358)
33 3qoc_A Putative metallopeptida 99.9 3.7E-23 1.3E-27 191.3 9.1 127 79-228 8-135 (135)
34 3ovk_A Aminopeptidase P, XAA-P 99.8 3.9E-21 1.3E-25 176.9 10.0 123 81-228 8-132 (132)
35 3il0_A Aminopeptidase P; XAA-P 99.8 4E-21 1.4E-25 176.3 9.4 124 80-228 3-128 (131)
36 3ooo_A Proline dipeptidase; st 99.8 1.1E-19 3.6E-24 167.2 10.7 123 83-228 3-132 (132)
37 3i7m_A XAA-Pro dipeptidase; st 99.8 4.2E-20 1.4E-24 171.7 7.6 125 83-228 4-138 (140)
38 3o5v_A X-Pro dipeptidase; crea 99.8 1.5E-19 5.2E-24 166.2 9.4 123 83-228 3-132 (132)
39 3pn9_A Proline dipeptidase; st 99.8 4.7E-19 1.6E-23 163.9 9.4 125 82-228 4-135 (138)
40 3il0_A Aminopeptidase P; XAA-P 99.7 1.1E-17 3.7E-22 153.3 11.0 126 252-413 4-131 (131)
41 3qoc_A Putative metallopeptida 99.7 2.9E-17 1E-21 151.6 9.7 132 244-410 2-135 (135)
42 3q6d_A Proline dipeptidase; st 99.7 1.3E-15 4.3E-20 163.5 20.6 126 80-229 2-129 (356)
43 3ovk_A Aminopeptidase P, XAA-P 99.6 1.3E-15 4.5E-20 139.8 13.0 124 251-410 7-132 (132)
44 3pn9_A Proline dipeptidase; st 99.6 3.1E-16 1.1E-20 144.8 6.3 129 253-413 4-138 (138)
45 2zsg_A Aminopeptidase P, putat 99.5 4.4E-13 1.5E-17 143.8 22.5 124 83-229 2-132 (359)
46 3biq_A FACT complex subunit SP 99.5 3.2E-13 1.1E-17 150.1 21.8 144 81-229 13-176 (467)
47 3i7m_A XAA-Pro dipeptidase; st 99.5 9.5E-15 3.2E-19 135.4 7.4 126 255-411 5-139 (140)
48 3ooo_A Proline dipeptidase; st 99.5 1.7E-14 6E-19 132.2 8.7 124 254-410 3-132 (132)
49 4b6a_t Probable metalloproteas 99.5 2.2E-13 7.4E-18 150.5 18.2 178 406-586 34-271 (614)
50 3o5v_A X-Pro dipeptidase; crea 99.5 1.6E-14 5.4E-19 132.5 7.1 124 254-410 3-132 (132)
51 4ege_A Dipeptidase PEPE; struc 99.5 3.3E-12 1.1E-16 138.0 21.2 128 80-229 14-149 (378)
52 3ctz_A XAA-Pro aminopeptidase 99.4 2.2E-14 7.4E-19 164.4 1.9 157 253-443 7-189 (623)
53 1kp0_A Creatine amidinohydrola 99.4 1.8E-12 6.1E-17 141.2 11.7 129 80-228 23-155 (402)
54 4fkc_A XAA-Pro aminopeptidase; 99.3 8.8E-11 3E-15 126.7 22.2 129 78-229 12-149 (377)
55 1wy2_A XAA-Pro dipeptidase; st 99.2 2.6E-10 9E-15 121.8 20.3 120 82-229 5-126 (351)
56 3cb6_A FACT complex subunit SP 99.0 1.9E-08 6.7E-13 110.7 21.9 145 81-229 13-176 (444)
57 1chm_A Creatine amidinohydrola 98.9 3.5E-09 1.2E-13 115.2 11.3 131 80-229 22-156 (401)
58 1wn1_A Dipeptidase; prolidase, 98.9 1.4E-09 4.8E-14 116.4 6.1 119 83-228 1-129 (356)
59 4b28_A Metallopeptidase, famil 98.8 2.4E-09 8.2E-14 118.4 7.3 126 81-229 79-228 (470)
60 2v3z_A XAA-Pro aminopeptidase; 98.5 1.2E-05 3.9E-10 88.4 23.0 138 81-229 8-174 (440)
61 3ig4_A XAA-Pro aminopeptidase; 98.4 1.2E-05 4E-10 87.8 20.7 135 81-229 6-170 (427)
62 2iw2_A XAA-Pro dipeptidase; me 94.4 0.03 1E-06 62.0 5.1 70 80-151 23-103 (494)
63 3fm3_A Methionine aminopeptida 94.2 0.097 3.3E-06 55.4 8.3 97 531-635 47-149 (358)
64 4fuk_A Methionine aminopeptida 90.5 0.84 2.9E-05 47.6 9.5 98 530-635 70-172 (337)
65 1xgs_A Methionine aminopeptida 89.1 1.2 4.1E-05 45.6 9.1 96 530-635 4-101 (295)
66 3tb5_A Methionine aminopeptida 87.5 2.1 7.3E-05 42.7 9.7 95 532-634 13-112 (264)
67 2b3h_A Methionine aminopeptida 87.3 2.8 9.6E-05 43.5 10.7 96 533-636 85-185 (329)
68 1qxy_A Methionyl aminopeptidas 85.5 5 0.00017 39.6 11.1 96 532-635 12-112 (252)
69 3s6b_A Methionine aminopeptida 85.4 2.5 8.5E-05 44.6 9.2 95 533-635 113-212 (368)
70 2q8k_A Proliferation-associate 84.1 1.6 5.3E-05 46.8 7.0 99 532-635 28-135 (401)
71 2nw5_A Methionine aminopeptida 83.9 4.8 0.00016 42.3 10.5 95 532-635 50-151 (360)
72 3mx6_A Methionine aminopeptida 83.1 6.8 0.00023 38.9 10.9 96 532-635 17-117 (262)
73 3pka_A Methionine aminopeptida 82.9 7.8 0.00027 39.1 11.4 96 532-635 50-150 (285)
74 3tav_A Methionine aminopeptida 81.9 6.4 0.00022 39.8 10.3 97 532-635 43-144 (286)
75 1o0x_A Methionine aminopeptida 80.6 7.3 0.00025 38.7 10.1 95 533-635 26-126 (262)
76 2gg2_A Methionine aminopeptida 80.4 7.5 0.00026 38.6 10.1 97 532-635 13-115 (263)
77 3rva_A Organophosphorus acid a 75.5 2 6.8E-05 46.7 4.3 134 80-228 11-157 (451)
78 1b6a_A Methionine aminopeptida 75.1 4.7 0.00016 44.0 7.1 95 533-634 170-269 (478)
79 4b6a_t Probable metalloproteas 75.0 6.9 0.00023 43.6 8.4 102 531-637 48-184 (614)
80 3l24_A XAA-Pro dipeptidase; PI 62.9 7.2 0.00024 43.0 5.3 134 80-228 11-157 (517)
81 3q9v_A DNA-binding response re 44.0 29 0.00099 30.6 5.2 59 195-269 60-118 (133)
82 2k4j_A Putative transcriptiona 42.6 20 0.0007 30.7 3.9 57 196-268 42-98 (115)
83 2z9m_A Response regulator YYCF 41.9 21 0.00072 30.7 3.9 57 196-268 37-93 (120)
84 3zq7_A KDP operon transcriptio 36.5 33 0.0011 28.3 4.2 57 196-268 29-85 (102)
85 1gxq_A PHOB, phosphate regulon 33.5 38 0.0013 28.2 4.1 58 195-268 31-88 (106)
86 3kmh_A D-lyxose isomerase; cup 27.1 41 0.0014 32.8 3.4 44 600-643 170-218 (246)
87 1opc_A OMPR, OMPRC; transcript 26.9 42 0.0014 28.1 3.2 58 195-268 31-88 (110)
88 2hwv_A DNA-binding response re 23.9 42 0.0015 28.9 2.7 57 196-268 44-100 (121)
89 2zxj_A Transcriptional regulat 22.5 47 0.0016 28.7 2.7 57 195-267 36-92 (120)
90 3rjp_A COVR; winged helix-turn 21.6 36 0.0012 27.7 1.7 56 196-267 23-78 (96)
91 2hqn_A Putative transcriptiona 20.4 89 0.003 25.9 4.0 52 199-266 33-84 (109)
No 1
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-105 Score=917.49 Aligned_cols=555 Identities=49% Similarity=0.837 Sum_probs=504.0
Q ss_pred CCHHHHHHHHHHHhcCCCCC-----ccEEEEcCCCCCCccccccccccceEecCCcCCceEEEEeCCCcEEEEccccHHH
Q 005915 79 DAPDEKLRALRELFSRPGVN-----IDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQ 153 (670)
Q Consensus 79 ~~~~~Rl~~lr~~m~~~~~~-----lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g~lvv~~~~~~L~td~ry~~q 153 (670)
+++.+||++||++|++ ++ +||+|||+.|+|||||++++++|++||||||||+|++|||.++++||||+||++|
T Consensus 4 ~~~~~Rl~~LR~~m~~--~~~~~~~lda~lv~~~D~h~sey~~~~~~~~~ylsGFtGSaG~~vVt~~~a~l~tDgRY~~Q 81 (623)
T 3ctz_A 4 KVTSELLRQLRQAMRN--SEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGRYFLQ 81 (623)
T ss_dssp BCCHHHHHHHHHHTTC--TTTCSSCCSEEEECSCCTTCCSSCCGGGCHHHHHHSCCSSCCEEEEESSCEEEEECGGGHHH
T ss_pred CCHHHHHHHHHHHHHh--cCCCCCceeEEEECCCCccccccccchhccceeccCcCCCceEEEEecCeeEEEECcHHHHH
Confidence 3456899999999999 99 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCceEEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCC
Q 005915 154 AEKQLSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRP 233 (670)
Q Consensus 154 a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp 233 (670)
|++|++.+|++++.+..+.+.+.+||.+.+..+++||||++++|++.+++|++.|++.+++|+++ ..|+||.+| ++||
T Consensus 82 A~~ql~~~~~l~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~l~~~l~~~~~~lv~~-~~~lvd~iw-~~Rp 159 (623)
T 3ctz_A 82 AAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLIPV-KENLVDKIW-TDRP 159 (623)
T ss_dssp HHHHBCTTEEEEETTSTTCCCHHHHHHHHCCTTCEEEECGGGSBHHHHHHHHHHHHHTTCEEEEC-SSCHHHHHC-TTCC
T ss_pred HHHhcCCceEEEEecCCCCccHHHHHHHhCcCCCEEEECcccccHHHHHHHHHHHHhcCCEEEec-CCCcHHHHh-hcCC
Confidence 99999767999987765688999999998888899999999999999999999998777899998 459999999 7999
Q ss_pred CCCCcccccccccccchhHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCCceEEEEeC
Q 005915 234 KPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDD 313 (670)
Q Consensus 234 ~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~ 313 (670)
..|..|++.++.+|++.++.+|++++|+.|+++++|++||++++|++||+|++|++++++|+++++++|+.++++||++.
T Consensus 160 ~k~~~e~~~~~~~~ag~~~~~rl~~lr~~m~e~~~dallit~~~~i~yl~~~~G~dv~~~pi~~~~llv~~~~~~l~v~~ 239 (623)
T 3ctz_A 160 ERPCKPLLTLGLDYTGISWKDKVADLRLKMAERNVMWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDG 239 (623)
T ss_dssp CCCCCCCEECCHHHHSSCHHHHHHHHHHHHHTTTEEEEEECCHHHHHHHHTEECCSSSSSCCCSCEEEEESSCEEEECCS
T ss_pred CCCchhhhhcchhhcChhHHHHHHHHHHHHHHcCCCEEEECCHHHHHHHhCCCCccCCCCcceeEEEEEecCCcEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCH-HHHhhhh-------cCCeEEEecccHHHHHHHHHhc---CCEEEEeCCCchHHHHHHHHHHHHHhhhccccccc
Q 005915 314 SKVTP-DVMDHLK-------NAGVELRPYNSILSEIKSLAAQ---GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKS 382 (670)
Q Consensus 314 ~~~~~-~~~~~l~-------~~~v~i~~y~~~~~~l~~l~~~---~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~ 382 (670)
.++.. ++.+++. ..++++++|.++.+.++++... .++|++|.. .++.+++.|..
T Consensus 240 ~~~~~~~~~~~l~~~~~~p~~~~v~v~~y~~~~~~l~~l~~~~~~~~~i~id~~-~~~~l~~~l~~-------------- 304 (623)
T 3ctz_A 240 DRIDAPSVKEHLLLDLGLEAEYRIQVHPYKSILSELKALCADLSPREKVWVSDK-ASYAVSETIPK-------------- 304 (623)
T ss_dssp GGGGSHHHHHHTTTTSCCCGGGCEEEECGGGHHHHHHHHHHTCCTTCEEEEETT-SBHHHHHHSCG--------------
T ss_pred hhcCHHHHHHHHhhccccccCCceEEEEhHHHHHHHHHHHhcccCCeEEEECch-hhHHHHHhccc--------------
Confidence 65554 5666663 2458899999998888887642 379999987 45555544421
Q ss_pred ccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHH
Q 005915 383 KTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFR 462 (670)
Q Consensus 383 ~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~ 462 (670)
..++++..+++..+|+|||++||+.||+|++++++|+.++++++++.+ .++|+||.|+++.++.++
T Consensus 305 -------------~~~~v~~~~~i~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i-~~~g~tE~el~~~l~~~~ 370 (623)
T 3ctz_A 305 -------------DHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEV-PKGGVTEISAADKAEEFR 370 (623)
T ss_dssp -------------GGEEEESSCHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTCCBHHHHHHHHHHHH
T ss_pred -------------cceEEecccHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcHHHHHHHHHHHH
Confidence 125778899999999999999999999999999999999999987776 579999999999998876
Q ss_pred HhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHH
Q 005915 463 SKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQG 542 (670)
Q Consensus 463 ~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a 542 (670)
....|+.+.+|++|+++|+|++++||.|++.++++|++||+|++|+|++|+||++|+|||+++|+|+++|+++|++++++
T Consensus 371 ~~~~g~~~~sf~~iv~~G~n~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a 450 (623)
T 3ctz_A 371 RQQADFVDLSFPTISSTGPTGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKG 450 (623)
T ss_dssp HTSTTEEEESSCCEEEEGGGGGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred HhcCCCcCCCCCceeeecCccccccCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHH
Confidence 55567777999999999999999999997445699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecC
Q 005915 543 HIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDH 622 (670)
Q Consensus 543 ~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~ 622 (670)
+++++++++|.|+++.+|+.++++++++.|++|.|++|||||++|++||+|..++.+.+++.+|+|||||++|||+|.++
T Consensus 451 ~~~~~~~~~p~G~~~~~id~~ar~~l~~~G~~~~h~~GHgvG~~l~vHE~P~~i~~~~~~~~~L~~GMv~tiEPGiy~~g 530 (623)
T 3ctz_A 451 HIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDG 530 (623)
T ss_dssp HHHHHTCCEETTCBGGGGGGGGTHHHHHTTCCCSSCSEEBCCSSSCSSCCSCEECTTCSCSCBCCTTCEEEECCEEEETT
T ss_pred HHHHHHHhCcCCCcHHHHHHHHHHHHHHhCCCCCCCccccCCCCCCCCCCCccCCCCCCCCCccCCCeEEEEeCcEEECC
Confidence 99999999987999999999999999999999999999999999999999975664323678999999999999999999
Q ss_pred cceEEEEEEEEEecCCCCCCCCCccccceeEccCCCcchhHhhh
Q 005915 623 AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVCHENR 666 (670)
Q Consensus 623 ~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~~i~~ 666 (670)
.+|+||||+|+||++++.++||+.+|||||+||.+|++++.|+.
T Consensus 531 ~~GiRiEd~vlVt~~~~~~~~~~~~~lg~e~LT~~P~~~~~i~~ 574 (623)
T 3ctz_A 531 AFGIRIENVVLVVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDV 574 (623)
T ss_dssp TEEEECBEEEEEEEECCSSCCSSSCEEEEEECCCCCCCGGGSCG
T ss_pred ceEEEEeeEEEEecCCcccccccccccCCceeeeCCccHHHHHH
Confidence 99999999999999988888999999999999999999887764
No 2
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=1e-67 Score=570.01 Aligned_cols=350 Identities=25% Similarity=0.382 Sum_probs=312.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCCceEEEEeCCCCCHHHHhhhhcCCe
Q 005915 250 LDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGV 329 (670)
Q Consensus 250 ~e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~~~l~~~~v 329 (670)
+++.+|+++||+.|+++|+|++||++++|++|||||++++ ++++|+.++++||+|. ++.+++...+. ++
T Consensus 1 ~~~~~Rl~~lr~~m~~~giDa~lI~~~~ni~YLtGf~g~~--------~~llvt~~~~~l~~d~-r~~~~a~~~~~--~~ 69 (356)
T 3q6d_A 1 SNAMEKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTA--------GVVLISKKRAQFITDF-RYVEQASKQAV--GY 69 (356)
T ss_dssp -CHHHHHHHHHTTHHHHTCSEEEECCHHHHHHHHCCCSSS--------CEEEEESSCEEEEECG-GGHHHHHHHST--TS
T ss_pred CcHHHHHHHHHHHHHHcCCCEEEECChhhceEccCCCCCC--------eEEEEECCCeEEEECh-hhHHHHHhhCC--CC
Confidence 3688999999999999999999999999999999999876 7899999999999994 56556665554 35
Q ss_pred EEEec-ccHHHHHHHHHh--cCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCcc
Q 005915 330 ELRPY-NSILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPI 406 (670)
Q Consensus 330 ~i~~y-~~~~~~l~~l~~--~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i 406 (670)
++..| .+..+.+.++.. +.++||+|.+.+++..++.|++.+ ++ +++|+++++
T Consensus 70 ~v~~~~~~~~~~l~~~l~~~~~~~igve~~~~~~~~~~~l~~~~------------------------~~-~~~~~~~~~ 124 (356)
T 3q6d_A 70 EIVQHAGLIIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAI------------------------DA-EFIPTSGLV 124 (356)
T ss_dssp EEEECSSCHHHHHHHHHHHHTCSEEEEETTTSBHHHHHHHHHHC------------------------CS-EEEEECSHH
T ss_pred EEEEeCCCHHHHHHHHHHhcCCceEEEcCccCCHHHHHHHhhhc------------------------cc-ceecchhhh
Confidence 55554 334444444332 368999999999999999998853 35 789999999
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccc
Q 005915 407 AFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAII 486 (670)
Q Consensus 407 ~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~ 486 (670)
..+|++||++||+.||+|+++++.++..+++++ +||+||.|+++.++..+ ...|+.+.+|++++++|+|++.+
T Consensus 125 ~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~te~e~~~~~~~~~-~~~g~~~~~f~~iv~~g~n~~~~ 197 (356)
T 3q6d_A 125 EKLRLIKTDSEIKILKEAAQIADAAFEHILSFI------RPGVSEIEVSNELEFFM-RKQGATSSSFDIIVASGLRSALP 197 (356)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTC------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEEGGGGGCT
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHH-HHCCCCcCCCCCEEEEcCccccC
Confidence 999999999999999999999999998887766 89999999999999764 45788888999999999999999
Q ss_pred cccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHH
Q 005915 487 HYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARS 566 (670)
Q Consensus 487 h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~ 566 (670)
|+.|++ ++|++||+|++|+|++|+||++|+|||+++|+|+++|+++|+++++++++++++++| |+++++|++++++
T Consensus 198 H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~~~~~ 273 (356)
T 3q6d_A 198 HGVASE---KVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKA-GLTGREADALTRD 273 (356)
T ss_dssp TCBCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHH
T ss_pred CCCCCC---cccCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHH
Confidence 999976 899999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHcCC--CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecCCCCCCCC
Q 005915 567 SLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFG 644 (670)
Q Consensus 567 ~l~~~G~--~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~g~~~~~~ 644 (670)
++++.|+ .|.|++||||| +++||.|. ++ ++++.+|+|||||++|||+|.++++|+|+||+|+||++
T Consensus 274 ~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~--~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~vt~~------- 341 (356)
T 3q6d_A 274 YITEKGYGEYFGHSTGHGIG--LEIHEAPG-LA--FRSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSE------- 341 (356)
T ss_dssp HHHHTTCGGGCCSCSEEECS--SSSSEEEE-ES--TTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEECSS-------
T ss_pred HHHHcCCcccCCCCCcccCC--CCcCcCCC-CC--CCCCCCcCCCCEEEECCEEEECCCCeEEEccEEEEeCC-------
Confidence 9999999 58999999999 99999997 55 34788999999999999999999999999999999999
Q ss_pred CccccceeEccCCCcchhH
Q 005915 645 GVSYLGFEKLTFVPIQVCH 663 (670)
Q Consensus 645 ~~~~lG~E~LT~~P~~~~~ 663 (670)
|+|+||..|+++.+
T Consensus 342 -----G~e~Lt~~p~~l~~ 355 (356)
T 3q6d_A 342 -----GNEVITKSPKELII 355 (356)
T ss_dssp -----SEEECCCSCCSCCB
T ss_pred -----cceeCCCCCcceEe
Confidence 99999999998754
No 3
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=100.00 E-value=9.7e-67 Score=565.65 Aligned_cols=366 Identities=25% Similarity=0.318 Sum_probs=315.8
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeC-CceEEEEeCCCCC
Q 005915 239 PIRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEM-DRAKLFVDDSKVT 317 (670)
Q Consensus 239 ~~~~~~~~~s~~e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~-~~~~Lfvd~~~~~ 317 (670)
|++.|+..|++.++++|++++|+.|+++|+|++||++++|++|||||++.+. .++ ++++|+. ++++||++.. ..
T Consensus 2 ~~~~~~~~~~~~e~~~R~~~l~~~m~~~g~da~li~~~~ni~YltG~~~~~~-~r~---~~l~v~~~g~~~l~~~~~-~~ 76 (378)
T 4ege_A 2 PGSMDSGRFDTAVYARRLAAAAAATEQAGLAGLVITPGYDLRYLIGSRADTF-ERL---TALVLPASGVPTIVLPRL-EL 76 (378)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCCCS-SSC---CEEEEESSSCCEEEEEGG-GG
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEECCcchhHHhhCCCCCCC-cce---EEEEEEeCCcEEEEEChh-hH
Confidence 7889999999999999999999999999999999999999999999998642 222 5777875 4799999853 33
Q ss_pred HHHHhh-hhcCCeEEEeccc---HHHHHHHHHhc-CCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCC
Q 005915 318 PDVMDH-LKNAGVELRPYNS---ILSEIKSLAAQ-GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTG 392 (670)
Q Consensus 318 ~~~~~~-l~~~~v~i~~y~~---~~~~l~~l~~~-~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (670)
.+++.. +...++.+.+|.+ ..+.+.++... .++||+| +.+++..+..|++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~igve-~~~~~~~~~~l~~~~---------------------- 133 (378)
T 4ege_A 77 ASLKESAASDLGVCVRDWVDGDDPYQLVAVALGGAPAATAVT-DSMPALHLLPLADAL---------------------- 133 (378)
T ss_dssp GGGGTSSTTTTTCEEEEECTTSCHHHHHHHHTTSSSCCEEEC-TTCCHHHHHHHHHHH----------------------
T ss_pred HHHHhcccCCCCeEEEEecCCCCHHHHHHHHHhcCCCEEEEc-CCCcHHHHHHHHHHc----------------------
Confidence 233332 3234567777743 34455554433 3699999 678999999998864
Q ss_pred CCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCC
Q 005915 393 QSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTS 472 (670)
Q Consensus 393 ~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~ 472 (670)
+.+++|+++++..+|++||++||+.||+|++++++++..+++++ +||+||.|+++.++..+ ...|+...+
T Consensus 134 ---~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~tE~el~~~~~~~~-~~~G~~~~~ 203 (378)
T 4ege_A 134 ---GVLPVLATDVLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAFL------VPGRTEAQVAADIAEAI-VAEGHSAVA 203 (378)
T ss_dssp ---TSCCEESHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHH-HHTTCSEEE
T ss_pred ---CCeEEEcHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHH-HHcCCCCCC
Confidence 45789999999999999999999999999999999999988877 99999999999999865 456777778
Q ss_pred CceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeE-CCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhC
Q 005915 473 FDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQY-VDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIF 551 (670)
Q Consensus 473 f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~-~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~ 551 (670)
| +|+++|+|++.+|+.|++ ++|++||+|++|+|++| +||++|+|||+++|+|+++|+++|++++++++++++++|
T Consensus 204 f-~iv~sG~n~~~~H~~~~~---~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~ 279 (378)
T 4ege_A 204 F-VIVGSGPHGADPHHGYSD---RKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQRAAVDAVR 279 (378)
T ss_dssp E-EEEEEGGGGGCTTCCCCS---CBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred e-eEEEeeCCCCccCCCCCC---CCcCCCCEEEEEEEEEECCeEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 9 999999999999999976 89999999999999999 999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHcCC--CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEE
Q 005915 552 PQSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIE 629 (670)
Q Consensus 552 P~G~~~~ev~~~a~~~l~~~G~--~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriE 629 (670)
| |+++++|++++++++++.|+ .|.|++||||| +++||.|. +. ++++.+|+|||||+||||+|.++.+|+|+|
T Consensus 280 p-G~~~~~v~~~~~~~~~~~G~~~~~~h~~GHgiG--l~~hE~P~-i~--~~~~~~L~~Gmv~tiEPgiy~~g~~gvriE 353 (378)
T 4ege_A 280 P-GVTAAQVDAAARDVLADAGLAEYFVHRTGHGIG--LCVHEEPY-IV--AGNELPLVAGMAFSIEPGIYFPGRWGARIE 353 (378)
T ss_dssp T-TCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEE-EC--TTCCCBCCTTBEEEECCEEEETTTEEEECB
T ss_pred C-CCcHHHHHHHHHHHHHHcCCCCcCCCCCcccCC--CCcCCCCc-cC--CCCCCccCCCCEEEECCEEEeCCccEEEEe
Confidence 9 99999999999999999999 58999999999 99999997 43 357899999999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCccccceeEccCCCcchhHh
Q 005915 630 NLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVCHE 664 (670)
Q Consensus 630 D~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~~i 664 (670)
|+|+||++ |+|+||..|+++.+|
T Consensus 354 d~v~Vt~~------------G~e~Lt~~p~~l~~~ 376 (378)
T 4ege_A 354 DIVVVTEN------------GALSVNNRPHELMVV 376 (378)
T ss_dssp EEEEEETT------------EEEESCCSCCSCEEE
T ss_pred eEEEEeCC------------cCeECCCCCCccEEc
Confidence 99999999 999999999998765
No 4
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=100.00 E-value=4.5e-66 Score=561.44 Aligned_cols=361 Identities=22% Similarity=0.305 Sum_probs=312.2
Q ss_pred ccccccchhHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCC-ceEEEEeCCCCCHHHH
Q 005915 243 HALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVM 321 (670)
Q Consensus 243 ~~~~~s~~e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~-~~~Lfvd~~~~~~~~~ 321 (670)
.++.|...||++|++|||+.|+++|+|++||++++|++|||||++.+....| .+++++.+ .++++++. +.....
T Consensus 6 ~~~~~~~~Ey~~Rl~rlr~~m~~~glDalli~~~~ni~YLTG~~~~~~~~~~---~~lvv~~~g~~~~~~~~--~~~~~~ 80 (377)
T 4fkc_A 6 HHHHHGSMDYKRRIHKFQAHFGKKGFEGALVAPGSNFYYLTGFNPLGTLERL---FVLILPSEGLLTAIAPR--LYEKEL 80 (377)
T ss_dssp --CCSSSSCHHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHSCCCCCCSSSC---CEEEEESSSCCEEEEEG--GGHHHH
T ss_pred cCCCcchHHHHHHHHHHHHHHHHCCCCEEEECCChhheeecCCCCCCCCcce---EEEEEcCCCcEEEEecc--chHHHH
Confidence 4678999999999999999999999999999999999999999987644444 34666654 56666652 222222
Q ss_pred hhhhcCCeEEEecc-------cHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCC
Q 005915 322 DHLKNAGVELRPYN-------SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQS 394 (670)
Q Consensus 322 ~~l~~~~v~i~~y~-------~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (670)
+.+ ..++..|. .+.+.++++....+++++|. .++...+..|++.+
T Consensus 81 ~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~d~-~~~~~~~~~l~~~~------------------------ 132 (377)
T 4fkc_A 81 EEF---NGEVVLWSDSENPYKIFATKIKETFKEGEKLLIDD-TMPVGVFLKAKDIF------------------------ 132 (377)
T ss_dssp TTC---SSEEEEECTTSCHHHHHHHHHHHHSCSSCEEEECT-TSCHHHHHHTHHHH------------------------
T ss_pred Hhc---CCCEEEeccccCHHHHHHHHHHHhhhccceeeeec-cccHHHHHHHHhhC------------------------
Confidence 222 23333332 34445555555678999984 57888898888765
Q ss_pred CCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCc
Q 005915 395 GGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFD 474 (670)
Q Consensus 395 ~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~ 474 (670)
++.+++|+++++..+|+|||++||+.||+|+++++.++.++++++ ++|+||.|+++.++..+.++.|+.+.+|+
T Consensus 133 ~~~~~~d~~~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~------~~G~tE~el~~~~~~~~~~~~g~~~~~f~ 206 (377)
T 4fkc_A 133 DKYSLHPISPVISELREIKDKDEIKAHKKAAEIVDKVFYRFIEGK------LEGKSERELANRIEYMIKNEFGADDVSFE 206 (377)
T ss_dssp TTSEEEESHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSC------CTTCBHHHHHHHHHHHHHTSTTCCEESSC
T ss_pred CCCeEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhhcc------CCCccHHHHHHHHhhhhhhccCCCCcccC
Confidence 467899999999999999999999999999999999999888776 89999999999998776666688889999
Q ss_pred eeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCC
Q 005915 475 TISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQS 554 (670)
Q Consensus 475 ~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G 554 (670)
+|+++|+|++.+|+.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++++++++++++| |
T Consensus 207 ~iv~~G~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G 282 (377)
T 4fkc_A 207 PIVASGPNGANPHHRPSH---RKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVAE-G 282 (377)
T ss_dssp CEEEEGGGGGCTTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHHHHHHHHHHHHHCBT-T
T ss_pred cccccccccccccccccc---ccccccccccccccccccCcccccceeEEEecCCHHHHHhhhhhHHHHHHHHHhhcC-C
Confidence 999999999999999976 899999999999999999999999999999999999999999999999999999999 9
Q ss_pred CChhHHHHHHHHHHHHcCC--CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEE
Q 005915 555 TPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLL 632 (670)
Q Consensus 555 ~~~~ev~~~a~~~l~~~G~--~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v 632 (670)
++++++++++++++++.|+ .|.|++||||| +++||.|+ ++ ++++.+|+|||||+||||+|.++.+|+||||+|
T Consensus 283 ~~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~hE~P~-i~--~~~~~~L~~Gmv~tiEPgiy~~g~~GvriEd~v 357 (377)
T 4fkc_A 283 IPAEVVDATARGIISKYGYGEYFIHRTGHGLG--IDVHEEPY-IS--PGNKKILKDGMVFTIEPGIYLQGKFGVRIEDDV 357 (377)
T ss_dssp CBHHHHHHHHHHHHHHTTCTTTCCSCSEEECS--SSSSEEEE-EC--SSCCCBCCTTCEEEECCEEEETTTEEEECBEEE
T ss_pred cchhhhHHHHHHHHHHhcccccCCCCCeEeCC--CccccCCc-cc--CCCCCEeCCCCEEEECCeeEECCccEEEEccEE
Confidence 9999999999999999999 48999999999 99999997 54 458899999999999999999999999999999
Q ss_pred EEecCCCCCCCCCccccceeEccCCCcchhH
Q 005915 633 YVKEVGTPNRFGGVSYLGFEKLTFVPIQVCH 663 (670)
Q Consensus 633 ~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~~ 663 (670)
+||++ |+|+||..|+++..
T Consensus 358 ~Vt~~------------g~e~Lt~~p~eli~ 376 (377)
T 4fkc_A 358 ALVDK------------KGIRLTNADRELIT 376 (377)
T ss_dssp EEETT------------EEEESCCSCCSCCB
T ss_pred EEECC------------CcEECCCCCCCeEe
Confidence 99999 99999999998754
No 5
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=2.3e-64 Score=544.44 Aligned_cols=346 Identities=27% Similarity=0.397 Sum_probs=307.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCcccc-----cccccccccCCCCCceeeEEEEEeCCceEEEEeCCCCCHHHHhhhhcCC
Q 005915 254 SKLSSLRSDLVDAGSSAIVISMLDEI-----AWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAG 328 (670)
Q Consensus 254 ~Rl~rlr~~M~e~glDallis~~~ni-----~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~~~l~~~~ 328 (670)
+|+++||+.|+++++|++|+++++|+ +|||||++++ ++++|+.++++||+|. ++..++... .+
T Consensus 2 ~Rl~~Lr~~m~~~~lDa~li~~~~ni~~~~~~YLtGf~~~~--------~~llI~~~~~~L~~d~-r~~~~a~~~---~~ 69 (359)
T 2zsg_A 2 DRSERLIQLISEEGIDAFLIMNIENSARASSVYFSGFTGSF--------SIILISENTRLLITDS-RYTVQAKQE---TD 69 (359)
T ss_dssp CCHHHHHHHHHTTTCCEEEEEESTTTTHHHHHHHHCCCSSC--------EEEEEETTEEEEEECT-TTHHHHHHH---CC
T ss_pred hHHHHHHHHHHHCCCcEEEEEChhHcccccCeeEeccCCCC--------EEEEEECCCCEEEECc-ccHHHHHhC---CC
Confidence 48999999999999999999999999 9999998765 7899999999999995 444455444 24
Q ss_pred eEEEec-cc-HHHHHHHHHh--cCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCC
Q 005915 329 VELRPY-NS-ILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTS 404 (670)
Q Consensus 329 v~i~~y-~~-~~~~l~~l~~--~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 404 (670)
+++..| .+ ..+.+.++.. +.++||+|...+++..++.|++.+ ++.+++++++
T Consensus 70 ~~v~~~~~~~~~~~l~~~L~~~~~~~vgvd~~~~~~~~~~~l~~~l------------------------~~~~~v~~~~ 125 (359)
T 2zsg_A 70 FEVREVKGGDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAF------------------------GDRKFIGIDD 125 (359)
T ss_dssp SEEEEC---CCHHHHHHHHHHTTCCEEEECGGGSBHHHHHHHHHHT------------------------TTCEEEECHH
T ss_pred CEEEEecCcchHHHHHHHHHhcCCCEEEEeCCcCCHHHHHHHHhhC------------------------CCcEEEEChh
Confidence 677766 33 3344444432 357999999889999999988753 2367889999
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCc
Q 005915 405 PIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGA 484 (670)
Q Consensus 405 ~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a 484 (670)
++..+|++||++||+.||+|+++++.++..+++++ +||+||.|+++.++... ...|+.+.+|++++++|+|++
T Consensus 126 ~i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~------~~G~te~e~~~~~~~~~-~~~g~~~~~f~~iv~~g~~~~ 198 (359)
T 2zsg_A 126 EVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQI------RAGMTEKEIAALLEYTM-RKEGAEGVAFDTIVASGCRSA 198 (359)
T ss_dssp HHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTC------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEEGGGGG
T ss_pred hhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHH-HHcCCCCCCCCCEEEEccccc
Confidence 99999999999999999999999999999888777 89999999999998764 557887889999999999999
Q ss_pred cccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHH
Q 005915 485 IIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 564 (670)
Q Consensus 485 ~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a 564 (670)
.+|+.|++ ++|++||+|++|+|++|+||++|+|||+++|+|+++|+++|+++++++++++++++| |+++++|++++
T Consensus 199 ~~h~~~~~---~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~p-G~~~~~v~~~~ 274 (359)
T 2zsg_A 199 LPHGKASD---KVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKA-GVTGKLLDSVA 274 (359)
T ss_dssp STTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHH
T ss_pred cccCCCCC---cccCCCCEEEEEEeEEECCEEEeeeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHH
Confidence 99999875 899999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHcCC--CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecCCCCCC
Q 005915 565 RSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNR 642 (670)
Q Consensus 565 ~~~l~~~G~--~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~g~~~~ 642 (670)
++++++.|+ .|.|++||||| +++||.|. ++ ++++.+|+|||||+||||+|.++++|+|+||+|+||++
T Consensus 275 ~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~--~~~~~~l~~gmv~tiEPgiy~~~~~gvriEd~v~vt~~----- 344 (359)
T 2zsg_A 275 REFIREKGYGEFFGHSLGHGIG--LEVHEGPA-IS--FRNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQ----- 344 (359)
T ss_dssp HHHHHHTTCGGGBCSCSEEECS--SSSSEEEE-ES--TTCCCBCCTTBEEEECCEEEETTTEEEECBEEEEEETT-----
T ss_pred HHHHHHcCCcccCCCCCccccC--cccCCCCC-cC--CCCCCCcCCCCEEEECCEEEECCCcEEEEeeEEEEcCC-----
Confidence 999999999 58899999999 99999996 65 34788999999999999999999999999999999999
Q ss_pred CCCccccceeEccCCCcchhH
Q 005915 643 FGGVSYLGFEKLTFVPIQVCH 663 (670)
Q Consensus 643 ~~~~~~lG~E~LT~~P~~~~~ 663 (670)
|+|+||..|+++.+
T Consensus 345 -------g~e~Lt~~~~~l~~ 358 (359)
T 2zsg_A 345 -------GCEILTTLPRSIFV 358 (359)
T ss_dssp -------EEEECCCSCCSCEE
T ss_pred -------cceECCCCCcccee
Confidence 99999999998753
No 6
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=100.00 E-value=1.2e-63 Score=537.65 Aligned_cols=345 Identities=23% Similarity=0.250 Sum_probs=299.1
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCCc-eEEEEeCCCCCHHHHhhhhcCCeEEE
Q 005915 254 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDR-AKLFVDDSKVTPDVMDHLKNAGVELR 332 (670)
Q Consensus 254 ~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~~-~~Lfvd~~~~~~~~~~~l~~~~v~i~ 332 (670)
+|++++|+.|+++|+|++|+++++|++|||||++. +++.+ .++++++.++ ++||++..+.. +++. +++.
T Consensus 1 ~R~~~l~~~m~~~~~d~~li~~~~n~~yltG~~~~-~~~~~--~~~l~i~~~~~~~l~~~~~~~~-~~~~------~~v~ 70 (356)
T 1wn1_A 1 MRLEKFIHLLGERGFDGALISPGTNLYYLTGLRLH-EVGER--LAILAVSAEGDYRFLAPSLYEN-VVNN------FPAT 70 (356)
T ss_dssp CHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCS-CCTTS--CCEEEEETTSCEEEEEEGGGTT-TTTT------SCEE
T ss_pred CHHHHHHHHHHHCCCcEEEECCCccceeecCCcCC-CCCCc--eEEEEEeCCCcEEEEECcccHH-HhhC------CeEE
Confidence 38999999999999999999999999999999874 34443 2678888765 99999865433 2211 3444
Q ss_pred ecc-------cHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCc
Q 005915 333 PYN-------SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSP 405 (670)
Q Consensus 333 ~y~-------~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 405 (670)
+|. .+.+.+++++.+.++||+| +.++...++.|++. ++.++++++++
T Consensus 71 ~~~~~~~~~~~l~~~l~~~~~~~~~i~~~-~~~~~~~~~~l~~~-------------------------~~~~~~~~~~~ 124 (356)
T 1wn1_A 71 FWHDGENPYAKLREILEELGISKGRILIE-DTMRADWLIGIMKL-------------------------GKFTFQPLSSL 124 (356)
T ss_dssp EECTTSCHHHHHHHHHHHTTCSSEEEEEC-TTSBHHHHHHHGGG-------------------------SCEEEEETHHH
T ss_pred EEcCCCCHHHHHHHHHHHhcCCCCEEEEe-CCcCHHHHHHHHcC-------------------------CCCeEEEcHHH
Confidence 442 2333333332246799999 77888888777542 24578899999
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCcc
Q 005915 406 IAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAI 485 (670)
Q Consensus 406 i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~ 485 (670)
+..+|++||++||+.||+|+++++.++.++++++ +||+||.|+++.++..+.+. +.+.+|++++++|+|++.
T Consensus 125 i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~~~~--~~~~~f~~iv~~g~n~~~ 196 (356)
T 1wn1_A 125 IKELRMIKDKEEVKMMEHASRIADKVFEEILTWD------LIGMKERELALKIELLIREL--SDGIAFEPIVASGENAAN 196 (356)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSC------CTTCBHHHHHHHHHHHHHHH--SSEESSCCEEEEGGGGGC
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHHHh--CcCCCCCcEEEEeccccc
Confidence 9999999999999999999999999999988877 89999999999999876554 567899999999999999
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHH
Q 005915 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (670)
Q Consensus 486 ~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~ 565 (670)
+|+.|++ ++|++||+|++|+|++|+||++|+|||+++|+|+++|+++|+++++++++++++++| |+++++|+++++
T Consensus 197 ~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~~~~ 272 (356)
T 1wn1_A 197 PHHEPGE---RKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVRE-GIKAKDVDSRAR 272 (356)
T ss_dssp TTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCBT-TSBHHHHHHHHH
T ss_pred ccCCCCC---CeecCCCEEEEEEEEEECCEEeccEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHH
Confidence 9999975 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCC--CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecCCCCCCC
Q 005915 566 SSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRF 643 (670)
Q Consensus 566 ~~l~~~G~--~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~g~~~~~ 643 (670)
+++++.|+ +|.|++||||| +++||.|. ++ ++++.+|+|||||+||||+|.++.+|+|+||+|+||++
T Consensus 273 ~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~--~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt~~------ 341 (356)
T 1wn1_A 273 EVISKAGYGEYFIHRTGHGLG--LDVHEEPY-IG--PDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEG------ 341 (356)
T ss_dssp HHHHTTTCGGGCCSCSEEECS--SSSSEEEE-ES--TTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEETT------
T ss_pred HHHHHcCCcccCCCCCcccCC--CccCCCcc-cC--CCCCCCcCCCCEEEECCeeEeCCCcEEEEeeEEEEeCC------
Confidence 99999999 58999999999 99999997 54 35788999999999999999999999999999999999
Q ss_pred CCccccceeEccCCCcchhH
Q 005915 644 GGVSYLGFEKLTFVPIQVCH 663 (670)
Q Consensus 644 ~~~~~lG~E~LT~~P~~~~~ 663 (670)
|+|+||.+|+++.+
T Consensus 342 ------g~e~Lt~~p~~l~~ 355 (356)
T 1wn1_A 342 ------KGRRLTKAERELII 355 (356)
T ss_dssp ------EEEESCCCCCSCCB
T ss_pred ------ccEECCCCCCccee
Confidence 99999999998753
No 7
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=100.00 E-value=8.2e-63 Score=530.31 Aligned_cols=342 Identities=23% Similarity=0.273 Sum_probs=301.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEE-EEEeCCceEEEEeCCCCCHHHHhhhhcCCeEE
Q 005915 253 ASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAY-LIVEMDRAKLFVDDSKVTPDVMDHLKNAGVEL 331 (670)
Q Consensus 253 ~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~-llvt~~~~~Lfvd~~~~~~~~~~~l~~~~v~i 331 (670)
.+|++++|+.|+++|+|++|+++++|++|||||++.+ .++ ++++.++..+|++.. + .++ ... ..+++
T Consensus 5 ~~R~~~l~~~m~~~~~da~li~~~~n~~yltg~~~~~-------~~~~llv~~~~~~l~~~~~-~-~~~-~~~--~~~~v 72 (351)
T 1wy2_A 5 NEKVKKIIEFMDKNSIDAVLIAKNPNVYYISGASPLA-------GGYILITGESATLYVPELE-Y-EMA-KEE--SNIPV 72 (351)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCCSS-------CCEEEEETTEEEEEEEHHH-H-HHH-HHH--CSSCE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCceEecCCCCCC-------CcEEEEEECCCcEEEECch-H-HHH-hhc--CCCeE
Confidence 5799999999999999999999999999999998754 135 788888888898853 3 444 222 24556
Q ss_pred EecccHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCccccccc
Q 005915 332 RPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKA 411 (670)
Q Consensus 332 ~~y~~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~ 411 (670)
..|..+ +.+.++..+.++||+| +.+++..++.|++.+ +..+++++++++..+|+
T Consensus 73 ~~~~~~-~~l~~~l~~~~~ig~e-~~~~~~~~~~l~~~~------------------------~~~~~~~~~~~i~~~r~ 126 (351)
T 1wy2_A 73 EKFKKM-DEFYKALEGIKSLGIE-SSLPYGFIEELKKKA------------------------NIKEFKKVDDVIRDMRI 126 (351)
T ss_dssp EEESSH-HHHHHHHTTCSEEEEC-TTCBHHHHHHHHHHS------------------------CCCEEEECHHHHHHHHT
T ss_pred EEeCcH-HHHHHHHccCCEEEEc-CcCCHHHHHHHHhhC------------------------CCCeEEEcHHHHHHHHh
Confidence 666553 3344443346799999 889999999988753 33478999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCC
Q 005915 412 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPE 491 (670)
Q Consensus 412 vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~ 491 (670)
+||++||+.||+|+++++.++..+++++ +||+||.|+++.++..+ ...|+.+.+|++++++|+|++.+|+.|+
T Consensus 127 iK~~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~-~~~g~~~~~f~~iv~~g~n~~~~H~~~~ 199 (351)
T 1wy2_A 127 IKSEKEIKIIEKACEIADKAVMAAIEEI------TEGKKEREVAAKVEYLM-KMNGAEKPAFDTIIASGYRSALPHGVAS 199 (351)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEEGGGGGSTTCBCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHH-HHcCCCCCCCCCEEEEccccccccCCCC
Confidence 9999999999999999999999888777 89999999999998764 5578878899999999999999999997
Q ss_pred CCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHc
Q 005915 492 PGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI 571 (670)
Q Consensus 492 ~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~ 571 (670)
+ ++|++||+|++|+|++|+||++|+|||+++|+|+++|+++|+++++++++++++++| |+++++|++++++++++.
T Consensus 200 ~---~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~~~~~ 275 (351)
T 1wy2_A 200 D---KRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKP-GITAKELDSIARNIIAEY 275 (351)
T ss_dssp S---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHT
T ss_pred C---cccCCCCEEEEEEEEEECCEEecceEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHc
Confidence 6 899999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CC--CCccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecCCCCCCCCCcccc
Q 005915 572 GL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFGGVSYL 649 (670)
Q Consensus 572 G~--~~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~g~~~~~~~~~~l 649 (670)
|+ .|.|++||||| +++||.|. ++ ++++.+|+|||||+||||+|.++++|+|+||+|+|| +
T Consensus 276 g~~~~~~h~~GHgiG--l~~hE~p~-i~--~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt-~------------ 337 (351)
T 1wy2_A 276 GYGEYFNHSLGHGVG--LEVHEWPR-VS--QYDETVLREGMVITIEPGIYIPKIGGVRIEDTILIT-K------------ 337 (351)
T ss_dssp TCGGGCCSCSEEECS--SSSSEEEE-ES--TTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEE-T------------
T ss_pred CCcccCCCCcccccC--CCcCCCCc-cC--CCCCCCcCCCCEEEECCEEEeCCCCeEEEeeEEEEC-C------------
Confidence 98 48899999999 99999996 54 357889999999999999999999999999999999 9
Q ss_pred cee-EccCCCcch
Q 005915 650 GFE-KLTFVPIQV 661 (670)
Q Consensus 650 G~E-~LT~~P~~~ 661 (670)
|+| +||..|+++
T Consensus 338 G~e~~Lt~~p~~l 350 (351)
T 1wy2_A 338 NGSKRLTKTEREL 350 (351)
T ss_dssp TEEEESCCSCSCC
T ss_pred CceecCCCCCccc
Confidence 899 999999875
No 8
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=1.1e-61 Score=531.32 Aligned_cols=366 Identities=16% Similarity=0.108 Sum_probs=312.2
Q ss_pred cccccchhHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCCceEEEEeCCCCCHHHHhh
Q 005915 244 ALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDH 323 (670)
Q Consensus 244 ~~~~s~~e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~~~ 323 (670)
+..|+..++.+|+++||+.|+++++|++|+++++|++|||||++++. ..| ++++|+.++++||+|..+.. ++...
T Consensus 16 ~~~~~~~e~~~Rl~~Lr~~m~~~~lDa~li~~~~ni~yltgf~~s~~-~~p---~~llV~~~~~~l~~~~~~~~-~a~~~ 90 (402)
T 1kp0_A 16 YTPFSZAEMTRRZBRLRAWMAKSBIDAVLFTSYHNINYYSGWLYCYF-GRK---YAZVIBZVKAVTISKGIDGG-MPWRR 90 (402)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCCCT-TCC---CEEEECSSCEEEEEEGGGTT-HHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEcCCCCceEecCCCCCCC-Cce---EEEEEeCCCCEEEeccchhh-hhHHh
Confidence 44688999999999999999999999999999999999999998643 344 68889988999999965544 33333
Q ss_pred hhcCCeEEEec--ccHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCccee
Q 005915 324 LKNAGVELRPY--NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVF 401 (670)
Q Consensus 324 l~~~~v~i~~y--~~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd 401 (670)
+....+.+..| ....+.|.++..+.++||+|.+.+++..++.|++.+ ++.++++
T Consensus 91 ~~~~~v~~~~~~~~~~~~~l~~~l~~~~~igvd~~~~~~~~~~~l~~~l------------------------~~~~~v~ 146 (402)
T 1kp0_A 91 SFGBNIVYTDWKRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZKAL------------------------PGTEFVD 146 (402)
T ss_dssp CSSEEEEECSSSTTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHHHS------------------------TTCEEEE
T ss_pred ccCcceEeccccccCHHHHHHHHhccCCEEEEecCCCCHHHHHHHHHhC------------------------CCCEEEE
Confidence 32222333344 234566666654578999999999999999988753 3567899
Q ss_pred cCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCC----C--CCCce
Q 005915 402 RTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL----D--TSFDT 475 (670)
Q Consensus 402 ~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~----~--~~f~~ 475 (670)
+.+++..+|++||++||+.||+|+++++.++..+++++ +||+||.|+++.++..+.+. |.. . ..+++
T Consensus 147 ~~~~i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~~~~-g~~~~~~~~~~~~~~ 219 (402)
T 1kp0_A 147 VGZPVMWZRVIKSSEEZBLIRZGARISDIGGAATAAAI------SAGVPEYEVAIATTBAMVRZ-IARBFPYVELMDTWI 219 (402)
T ss_dssp CHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHH-HHHHSSSCEEEEEEE
T ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCcHHHHHHHHHHHHHHh-cccccCcccccCccc
Confidence 99999999999999999999999999999999988777 89999999999988764432 211 1 12345
Q ss_pred eEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 005915 476 ISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQST 555 (670)
Q Consensus 476 iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~ 555 (670)
++++|+|++.+|+.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|++++++++++++++|| |+
T Consensus 220 iv~~g~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~ 295 (402)
T 1kp0_A 220 WFQSGINTDGAHNPVTB---RVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIKP-GA 295 (402)
T ss_dssp EEEEGGGGGSTTCCEEC---CBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCT-TC
T ss_pred eeecccccccccCCCCC---cccCCCCEEEEEEEeeECCEeeecEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CC
Confidence 89999999999999875 899999999999999999999999999999999999999999999999999999999 99
Q ss_pred ChhHHHHHHHHHHHHcCCC--CccCcccccccCCccccCCCcccc--cCCCCccccCCCEEEECceeeec----CcceEE
Q 005915 556 PGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISF--RYGNMTPLVEGMIVSNEPGYYED----HAFGIR 627 (670)
Q Consensus 556 ~~~ev~~~a~~~l~~~G~~--~~h~~GHgiG~~l~~hE~P~~i~~--~~~~~~~L~~GMV~siEPgiy~~----~~~Gvr 627 (670)
++++|++++++++++.|+. +.|++||||| +++||.|..++. .++++.+|+|||||+||||+|.+ +.+|+|
T Consensus 296 ~~~~i~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~He~~~~~g~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~~~~~G~r 373 (402)
T 1kp0_A 296 RCKDIASELNBMYRZWDLLRYRTFGYGHSFG--VLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMBPEGEPGAGGYR 373 (402)
T ss_dssp BHHHHHHHHHHHHHHTTCGGGBCSCSCBBCE--EEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEECTTSTTCEEEE
T ss_pred cHHHHHHHHHHHHHHcCCCeecCCCcccccC--CccccCCcccCcccCCCCCCccCCCcEEEECCceeecCccCCCCcEE
Confidence 9999999999999999995 7899999999 999998864332 23477899999999999999998 889999
Q ss_pred EEEEEEEecCCCCCCCCCccccceeEccCCCcchhH
Q 005915 628 IENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVCH 663 (670)
Q Consensus 628 iED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~~ 663 (670)
+||+|+||++ |+|+||.+|+++..
T Consensus 374 ied~v~Vt~~------------g~e~Lt~~p~~~~~ 397 (402)
T 1kp0_A 374 EHDILVIKEN------------BTENITGFPFGPEH 397 (402)
T ss_dssp CBEEEEEETT------------EEEECCCSCCSTTT
T ss_pred EEEEEEEcCC------------cceECCCCCCchHH
Confidence 9999999999 99999999998764
No 9
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=4.9e-60 Score=527.99 Aligned_cols=375 Identities=13% Similarity=0.142 Sum_probs=312.9
Q ss_pred ccccchhHHHHHHHHHHHHH--HcCCCEEEEcCcc----cc--------cccccccccCCCCCceeeEEEEEeCCceEEE
Q 005915 245 LKYAGLDVASKLSSLRSDLV--DAGSSAIVISMLD----EI--------AWLLNLRGSDVPHSPVMYAYLIVEMDRAKLF 310 (670)
Q Consensus 245 ~~~s~~e~~~Rl~rlr~~M~--e~glDallis~~~----ni--------~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lf 310 (670)
..+++.++.+|+++||+.|+ ++|+|++||++++ |+ +|||||++.. ++++|+.++++||
T Consensus 6 ~~~~~~~~~~Rl~~Lr~~m~~~~~giDa~li~~~~~~~~~~y~~~~~~~~yLtGf~~~~--------~~lvVt~d~~~L~ 77 (467)
T 3biq_A 6 LNIDFDVFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEFPA--------TLIALVPGKVIII 77 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHGGGSTTCCSEEEEEECSCCTTSTTCHHHHHHHHHHSSCCSS--------EEEEEETTEEEEE
T ss_pred cccCHHHHHHHHHHHHHHHHhhhcCCCEEEEEcCCCCCCCCCccchhhhhHhhCCCCCC--------EEEEEECCeEEEE
Confidence 56899999999999999999 9999999999998 99 5999998643 7899999999999
Q ss_pred EeCCC--CCHHHHh--hhh--cCCeEEEec--c------cHHHHHHHHHhc-CCEEEEe-CCCchHHHHHHHHHHHHHhh
Q 005915 311 VDDSK--VTPDVMD--HLK--NAGVELRPY--N------SILSEIKSLAAQ-GAQLWLD-PSSVNAAIMNTYEIAIEKYL 374 (670)
Q Consensus 311 vd~~~--~~~~~~~--~l~--~~~v~i~~y--~------~~~~~l~~l~~~-~~rIgve-~~~~s~~~~~~L~~~~~~~~ 374 (670)
+|..+ +..++.+ ++. ...+++..| . ...+.|.++... +++||++ .+.++...++.|++.+....
T Consensus 78 ~d~~~~~y~~~a~~~~e~~~~~~~v~v~~~~~~~~~~~~~~~~~L~~~L~~~~~~Igv~~~~~~s~~~~~~L~~~l~~~~ 157 (467)
T 3biq_A 78 TSSAKAKHLQKAIDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAV 157 (467)
T ss_dssp EEHHHHHHHHHHHGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHH
T ss_pred ECCcchHHHHHHhhhcccccCCCCeEEEEecccccccchhhHHHHHHHHHhhCCEEEEecCcccchhHHHHHHHHHHhhc
Confidence 99543 2234443 222 113666666 3 133445544321 6799996 56778899988887652100
Q ss_pred hcccccccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHH
Q 005915 375 TSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDV 454 (670)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~ei 454 (670)
+ .++.+++++.+++..+|+|||++||+.||+|+++++.++..++++++..+..+.|+||.|+
T Consensus 158 ~------------------~~~~~lv~~~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~g~g~te~el 219 (467)
T 3biq_A 158 K------------------ENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKL 219 (467)
T ss_dssp H------------------HHTCEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHH
T ss_pred c------------------cCCceeechHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCccHHHH
Confidence 0 0145788999999999999999999999999999999999999999766533338999999
Q ss_pred HHHHHHHHHhh----CC-------------C----CCCCCceeEeeCCCCc-cccccCCCCCCcccCCCCeEEEecceeE
Q 005915 455 ADKLLEFRSKQ----SG-------------F----LDTSFDTISGSGANGA-IIHYKPEPGKCSVVDSKKLFLLDSGAQY 512 (670)
Q Consensus 455 a~~~~~~~~~~----~G-------------~----~~~~f~~iv~sG~~~a-~~h~~p~~~~~~~i~~Gd~v~iD~g~~~ 512 (670)
++.++..+.+. .| + .+.+|++|+++|+|++ .+|+.|++ ++|++||+|++|+|++|
T Consensus 220 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~iv~~G~n~~~~~H~~~~~---~~l~~gd~v~iD~g~~~ 296 (467)
T 3biq_A 220 SDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTN---DQLYGNGCILASCGIRY 296 (467)
T ss_dssp HHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCEEECTTCCCCSTTCCCCS---SBCCCSEEEEEEECEEE
T ss_pred HHHHHHHHHhhhhhhcCCccccccccccccCCcccccCCCCCeEEecCCcceeeccCCCC---CccCCCCEEEEEEeEEE
Confidence 99998754330 23 2 2578999999999999 99999975 89999999999999999
Q ss_pred CCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh-hCCCCCChhHHHHHHHHHHHHcC--C--CCccCcccccccCC
Q 005915 513 VDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQA-IFPQSTPGFVLDAFARSSLWKIG--L--DYRHGTGHGVGAAL 587 (670)
Q Consensus 513 ~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~-~~P~G~~~~ev~~~a~~~l~~~G--~--~~~h~~GHgiG~~l 587 (670)
+||++|+||||++| |+++|+++|+++++++++++++ ++| |+++++|++++++++++.| + +|.|++||||| +
T Consensus 297 ~gy~sD~tRT~~~g-~~~~~~~~~~~v~~a~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~g~~~~~~h~~GHgiG--l 372 (467)
T 3biq_A 297 NNYCSNITRTFLID-PSEEMANNYDFLLTLQKEIVTNILKP-GRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIG--L 372 (467)
T ss_dssp TTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHTCCT-TCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS--S
T ss_pred CCEEeeeeEEEEeC-CCHHHHHHHHHHHHHHHHHHHhCCcC-CCcHHHHHHHHHHHHHHhCcchhhcCCCCcccccc--c
Confidence 99999999999999 8999999999999999999999 999 9999999999999999997 4 58999999999 9
Q ss_pred ccccCCCcccccCCC-CccccCCCEEEECceee-e-----cCcceEEEEEEEEEe--cCCCCCCCCCccccceeEcc-CC
Q 005915 588 NVHEGPQSISFRYGN-MTPLVEGMIVSNEPGYY-E-----DHAFGIRIENLLYVK--EVGTPNRFGGVSYLGFEKLT-FV 657 (670)
Q Consensus 588 ~~hE~P~~i~~~~~~-~~~L~~GMV~siEPgiy-~-----~~~~GvriED~v~Vt--e~g~~~~~~~~~~lG~E~LT-~~ 657 (670)
++||.|.+++ +++ +.+|++||||+||||+| . ++.+|+||||+|+|| ++ |+|+|| .+
T Consensus 373 ~~hE~p~~~~--~~~~~~~l~~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt~~~~------------G~e~Lt~~~ 438 (467)
T 3biq_A 373 EFRDSNFILN--VKNDYRKIQRGDCFNISFGFNNLKDSQSANNYALQLADTVQIPLDET------------EPPRFLTNY 438 (467)
T ss_dssp SSCCGGGBSS--TTCCSCCCCTTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECCSSTT------------SCCEESCCS
T ss_pred ccccCCccCC--CCCCCCccCCCCEEEEeCeEEeeecCCCCCccEEEEEEEEEEecCCC------------CcEEecccC
Confidence 9999996565 346 88999999999999999 7 889999999999999 87 899999 99
Q ss_pred CcchhHhhh
Q 005915 658 PIQVCHENR 666 (670)
Q Consensus 658 P~~~~~i~~ 666 (670)
|+++..|+.
T Consensus 439 p~~~~~i~~ 447 (467)
T 3biq_A 439 TKAKSQISF 447 (467)
T ss_dssp CCCHHHHEE
T ss_pred CCCHHHHHH
Confidence 999887753
No 10
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=8.7e-61 Score=530.17 Aligned_cols=362 Identities=18% Similarity=0.125 Sum_probs=301.5
Q ss_pred cccccchhHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccC--CCCCceeeEEEEEeCCceEEEEeCCCCCHHHH
Q 005915 244 ALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSD--VPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVM 321 (670)
Q Consensus 244 ~~~~s~~e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~--~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~ 321 (670)
.+++...++.+|+++||+.|+++|+|++||++++|++|||||++.+ .+++|. ++++|+.++..+|+|.. +...+.
T Consensus 71 ~~p~~~~~~~~Rl~rlr~~m~~~glDalli~~~~ni~YlTGf~g~~~~~~~~~~--~~llV~~dg~~~l~d~r-~~~~l~ 147 (470)
T 4b28_A 71 DLPDLAAMRRFRHRRLTDHVVARGYAGLLMFDPLNIRYATDSTNMQLWNTHNPF--RATLLCADGYMVMWDYK-NSPFLS 147 (470)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHCCCSSHHHHHHSCC--CEEEEETTSCEEEECCT-TCGGGG
T ss_pred CCCChHHHHHHHHHHHHHHHHHcCCCEEEEcCCCcceeecCCCCCcccccCCCC--EEEEEECCCCEEEEecc-hhhhhh
Confidence 4566788999999999999999999999999999999999999853 233443 67889888777888743 321111
Q ss_pred hhhhcCCeEEEec--------------------ccHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccc
Q 005915 322 DHLKNAGVELRPY--------------------NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKK 381 (670)
Q Consensus 322 ~~l~~~~v~i~~y--------------------~~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~ 381 (670)
.... ..-++..+ ..+.+.|++++...++||+|.. ++..++.|++
T Consensus 148 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~igve~~--~~~~~~~L~~------------- 211 (470)
T 4b28_A 148 EFNP-LVREQRAGADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAVDKV--MLHGLRALQA------------- 211 (470)
T ss_dssp TTCT-TSCEEECCCCCSHHHHGGGHHHHHHHHHHHHHHHHHHHSTTCCEEEESSC--CHHHHHHHHH-------------
T ss_pred hhhh-HHHHHHhcCCeeeeccCccccccchhHHHHHHHHHHHhCccCceeeeCcc--hHHHHHHHHc-------------
Confidence 1110 00122221 1223344444334689999975 4566777665
Q ss_pred cccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-----CHHHHHH
Q 005915 382 SKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKL-----TEVDVAD 456 (670)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~-----TE~eia~ 456 (670)
++++++|+++++..+|+|||++||+.||+|+++++.++..+++++ +||+ ||.|+++
T Consensus 212 -------------~~~~~vd~~~~v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~pG~~~~~~tE~el~~ 272 (470)
T 4b28_A 212 -------------QGFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFA------RSKVGDGVTCENDIWA 272 (470)
T ss_dssp -------------TTCEEEEHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHHTTSSCCBHHHHHH
T ss_pred -------------CCCEEEEcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCHHHHHH
Confidence 257899999999999999999999999999999999999999888 7888 9999999
Q ss_pred HHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEeccee-ECCeecceEEEEEcC--CCCHHHH
Q 005915 457 KLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQ-YVDGTTDITRTVHFG--EPTAREK 533 (670)
Q Consensus 457 ~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~-~~gY~sD~tRT~~vG--~p~~e~~ 533 (670)
.++.... ..|.. .+|.+|+++|+|++.+|+.|++ ++|++||+|++|+|+. |+||++|+||||++| +|+++|+
T Consensus 273 ~l~~~~~-~~G~~-~~~~~ivasG~n~~~~H~~~~~---~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~ 347 (470)
T 4b28_A 273 ILHSENV-RRGGE-WIETRLLASGPRSNPWFQECGP---RVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMI 347 (470)
T ss_dssp HHHHHHH-TTTCC-EESCCCEEEGGGGSSTTCCCCS---CBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHH
T ss_pred HHHHHHH-HcCCC-cCCCceeEEcCccccCCCCCCC---ccccCCCEEEEEecccccCeEEEeeEEEEEECCCCCCHHHH
Confidence 9987644 45654 5678899999999999999875 8999999999999998 899999999999999 6999999
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCCccCcccccccCCccccCCCccccc-----CCCCccccC
Q 005915 534 ECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFR-----YGNMTPLVE 608 (670)
Q Consensus 534 ~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~~h~~GHgiG~~l~~hE~P~~i~~~-----~~~~~~L~~ 608 (670)
++|++++++++++++++|| |+++++|++++++++++.|..+.|++||||| + +||.|. ++.. ++++.+|+|
T Consensus 348 ~~y~~v~~a~~a~i~~ikp-G~~~~di~~~ar~~i~~~~~~~~~~~GHGIG--l-~HE~P~-i~~~~~~~~~~~~~~L~~ 422 (470)
T 4b28_A 348 YAMQHGVEHIRTNMEMLKP-GVMIPELSANTHVLDAKFQKQKYGCLMHGVG--L-CDEWPL-VAYPDHAVAGAYDYPLEP 422 (470)
T ss_dssp HHHHHHHHHHHHHHHTCCT-TCBHHHHHHTCCCCCHHHHTTCCSCSEEEES--S-SEEEEE-ECCTTTCCTTSSCCBCCT
T ss_pred HHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHhhhcCCCCccCCCC--c-CCCCCc-ccCccccccCCCCCEECC
Confidence 9999999999999999999 9999999999999999988777799999999 8 699997 6532 347889999
Q ss_pred CCEEEECceeee-cCcceEEEEEEEEEecCCCCCCCCCccccceeEccCCCcchhHhh
Q 005915 609 GMIVSNEPGYYE-DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVCHEN 665 (670)
Q Consensus 609 GMV~siEPgiy~-~~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~~i~ 665 (670)
||||+|||++|. ++.+|+||||+|+||++ |+|+||.+|+++.+|+
T Consensus 423 GMV~tiEPgiy~~~g~~GvriEd~vlVte~------------G~e~LT~~p~~l~li~ 468 (470)
T 4b28_A 423 GMTLCVEALISEEGGDFSIKLEDQVLITED------------GYENLTKYPFDPALMG 468 (470)
T ss_dssp TCEEEEEEEEECTTCSCEEEEEEEEEECSS------------SEEECCCCCCCHHHHC
T ss_pred CCEEEEcCeeecCCCcEEEEEeeEEEEeCC------------cCeECCCCCCcHHhcc
Confidence 999999999998 89999999999999999 9999999999998874
No 11
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=2.6e-59 Score=512.05 Aligned_cols=370 Identities=16% Similarity=0.106 Sum_probs=306.4
Q ss_pred cccccccchhHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCCceEEEEeCCCCCHHHH
Q 005915 242 VHALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVM 321 (670)
Q Consensus 242 ~~~~~~s~~e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~ 321 (670)
..+.+|++.++.+|+++||+.|+++|+|++|+++++|++|||||..+.. ..| .+++|+.+++++|++..+......
T Consensus 13 ~~~~~~~~~e~~~R~~~l~~~m~~~~~da~li~~~~ni~yltg~~~~~~-~~~---~~llv~~~~~~l~~~~~~~~~~~~ 88 (401)
T 1chm_A 13 KVRSTFSAQEYANRQARLRAHLAAENIDAAIFTSYHNINYYSDFLYCSF-GRP---YALVVTEDDVISISANIDGGQPWR 88 (401)
T ss_dssp CCCCSSCHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCCCCT-TCC---CEEEECSSCEEEEEEGGGTTHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcccceeeCCCCcCCC-CCe---EEEEEecCCCEEEecccchhhHHH
Confidence 4466899999999999999999999999999999999999999865321 122 246678888899998544433222
Q ss_pred hhhhcCCeEEEec--ccHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcc
Q 005915 322 DHLKNAGVELRPY--NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAG 399 (670)
Q Consensus 322 ~~l~~~~v~i~~y--~~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (670)
+.+....+.+.+| .++.+.++++..+.++||+|.+.+++..++.|++.+ ++.++
T Consensus 89 ~~~~~~~v~~~~~~~~~~~~~l~~~l~~~~~i~ve~~~~~~~~~~~l~~~~------------------------~~~~~ 144 (401)
T 1chm_A 89 RTVGTDNIVYTDWQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARY------------------------PDAEL 144 (401)
T ss_dssp HCCSSEEEEECTTSTTHHHHHHHHHCSCCSEEEECTTTCBHHHHHHHHHHC------------------------TTCEE
T ss_pred hhcccceeeeccccccCHHHHHHHHhccCCeEEEecCCCCHHHHHHHHhhC------------------------CCCEE
Confidence 2221012223333 345666777654467999999989999999988753 46688
Q ss_pred eecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhh---CCCCCCCCce-
Q 005915 400 VFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQ---SGFLDTSFDT- 475 (670)
Q Consensus 400 vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~---~G~~~~~f~~- 475 (670)
+++.+++..+|+|||++||+.||+|+++++.++..+.+.+ +||+||.|+++.++...... ......+|++
T Consensus 145 ~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~tE~el~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (401)
T 1chm_A 145 VDVAAACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEAL------GDQVPEYEVALHATQAMVRAIADTFEDVELMDTW 218 (401)
T ss_dssp EECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHHHHHCSSCCBCCCE
T ss_pred EEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHHHhccccCCCccccCcc
Confidence 9999999999999999999999999999999998877665 89999999999887643321 1111234665
Q ss_pred -eEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCC
Q 005915 476 -ISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQS 554 (670)
Q Consensus 476 -iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G 554 (670)
++++|.|++.+|+.|++ ++|++||+|++|+|+.|+||++|+||||++|+|+++|+++|++++++++++++++|| |
T Consensus 219 ~~~~~g~n~~~~H~~~~~---~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~~~~~~~~~y~~v~~a~~~~i~~~~p-G 294 (401)
T 1chm_A 219 TWFQSGINTDGAHNPVTT---RKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKP-G 294 (401)
T ss_dssp EEEEEGGGGGSTTCCEES---CBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCT-T
T ss_pred eeeeecccccccccCCCC---CccCCCCEEEEEEEEeeCCEeecceEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-C
Confidence 47999999999999875 899999999999999999999999999999999999999999999999999999999 9
Q ss_pred CChhHHHHHHHHHHHHcCCC--CccCcccccccCCccccCCCcc--cccCCCCccccCCCEEEECceeeec----CcceE
Q 005915 555 TPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSI--SFRYGNMTPLVEGMIVSNEPGYYED----HAFGI 626 (670)
Q Consensus 555 ~~~~ev~~~a~~~l~~~G~~--~~h~~GHgiG~~l~~hE~P~~i--~~~~~~~~~L~~GMV~siEPgiy~~----~~~Gv 626 (670)
+++++|++++++++++.|+. +.|++||||| +.+||.|..+ ...++++.+|+|||||+||||+|.+ +.+|+
T Consensus 295 ~~~~~v~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~h~~~~~~g~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~g~~Gv 372 (401)
T 1chm_A 295 ARCSDIARELNEIFLKHDVLQYRTFGYGHSFG--TLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGLPGAGGY 372 (401)
T ss_dssp CBHHHHHHHHHHHHHHHTCGGGBCSCSCBBCS--BEETTEECCTTSBCCTTCCCBCCTTCEEEECCEEEECTTSTTCEEE
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCCCCCcccC--ccCCccccccCccccCCCCCccCCCCEEEEcCeeeeccccCCCCeE
Confidence 99999999999999999993 6799999999 9999976422 2234577899999999999999998 88999
Q ss_pred EEEEEEEEecCCCCCCCCCccccceeEccCCCcchhH
Q 005915 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVCH 663 (670)
Q Consensus 627 riED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~~ 663 (670)
|+||+|+||++ |+|+||.+|+++..
T Consensus 373 riEd~vlVt~~------------G~e~LT~~p~~~~~ 397 (401)
T 1chm_A 373 REHDILIVNEN------------GAENITKFPYGPEK 397 (401)
T ss_dssp ECBEEEEEETT------------EEEECCCSCCSHHH
T ss_pred EEeeeEEECCC------------cceECCCCCCChhh
Confidence 99999999999 99999999998764
No 12
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=1.5e-59 Score=521.03 Aligned_cols=371 Identities=14% Similarity=0.175 Sum_probs=306.3
Q ss_pred ccccchhHHHHHHHHHHHHHH--------cCCCEEEEcCcc----c--------ccccccccccCCCCCceeeEEEEEeC
Q 005915 245 LKYAGLDVASKLSSLRSDLVD--------AGSSAIVISMLD----E--------IAWLLNLRGSDVPHSPVMYAYLIVEM 304 (670)
Q Consensus 245 ~~~s~~e~~~Rl~rlr~~M~e--------~glDallis~~~----n--------i~YLtGf~g~~~~~~P~~~~~llvt~ 304 (670)
..|++.++.+|+++||+.|++ +|+|++||++++ | ++|||||++.+ ++++++.
T Consensus 6 ~~~~~~~~~~Rl~~L~~~m~~~~~~~~~~~g~Dalli~~~~~d~~~~y~q~~~~~~yLtG~~~~~--------~~lvi~~ 77 (444)
T 3cb6_A 6 YEIDEITFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQKSTALHTWLLGYEFPS--------TLILLEK 77 (444)
T ss_dssp CCCCHHHHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTTCCCCHHHHHHHHHHSSCCSS--------EEEEEET
T ss_pred CCcCHHHHHHHHHHHHHHhhhcCcccccccCCCEEEEEeCCCCCCCCcccchhhhHHHhCCCCCC--------EEEEEeC
Confidence 569999999999999999998 999999999986 6 89999998765 7899999
Q ss_pred CceEEEEeCCC--CCHHHH-hhhhcCCeEEEec-cc------HHHHHHH-HHhcCCEEEEeC-CCchHHHHHHHHHHHHH
Q 005915 305 DRAKLFVDDSK--VTPDVM-DHLKNAGVELRPY-NS------ILSEIKS-LAAQGAQLWLDP-SSVNAAIMNTYEIAIEK 372 (670)
Q Consensus 305 ~~~~Lfvd~~~--~~~~~~-~~l~~~~v~i~~y-~~------~~~~l~~-l~~~~~rIgve~-~~~s~~~~~~L~~~~~~ 372 (670)
++++||++..+ +.+++. ..+....+.+..| .+ ..+.+.+ +....++||++. +..+...+..+...+..
T Consensus 78 ~~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~ig~~~~~~~~~~~~~~l~~~l~~ 157 (444)
T 3cb6_A 78 HRITILTSVNKANMLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDSIFEP 157 (444)
T ss_dssp TEEEEEEEHHHHTTTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTT
T ss_pred CcEEEEEcCchHHHHhhhhccccCCccEEEEecccccccCHHHHHHHHHHHHhcCCEEEEeccccchhHHHHHHHHHHhh
Confidence 99999998542 344444 3332223555555 31 1222222 222357999986 55666666666554311
Q ss_pred hhhcccccccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCC--c
Q 005915 373 YLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALA-QFWVWLEEEIHNGAK--L 449 (670)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~-~~~~~l~~~i~~~~G--~ 449 (670)
. .++.+++++++++..+|+|||++||+.||+|+++++.++. .++.++.+.+ +|| +
T Consensus 158 ~--------------------~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i--~~G~~~ 215 (444)
T 3cb6_A 158 V--------------------KSEFNLVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYI--DQGKKI 215 (444)
T ss_dssp T--------------------GGGSEEEECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH--HHTCCC
T ss_pred c--------------------cCCceEeecHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccc
Confidence 0 0245789999999999999999999999999999999999 7877777777 778 9
Q ss_pred CHHHHHHHHHHHHHhh-------CC---C----CCCCCceeEeeCCCCc-cccccCCCCCCcccCCCCeEEEecceeECC
Q 005915 450 TEVDVADKLLEFRSKQ-------SG---F----LDTSFDTISGSGANGA-IIHYKPEPGKCSVVDSKKLFLLDSGAQYVD 514 (670)
Q Consensus 450 TE~eia~~~~~~~~~~-------~G---~----~~~~f~~iv~sG~~~a-~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~g 514 (670)
||.|+++.++..+... .| + .+.+|++|+++|+|++ .+|+.|++ ++|+ ||+|++|+|++|+|
T Consensus 216 te~el~~~~~~~~~~~~~~~g~~~ga~~~~~~~~~~~f~~iv~~g~n~~~~~H~~~~~---~~l~-gd~v~iD~g~~~~g 291 (444)
T 3cb6_A 216 THSKFSDQMESLIDNEAFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITDD---RNLH-GDVVLCSLGFRYKS 291 (444)
T ss_dssp BHHHHHHHHHGGGGCHHHHTCGGGCCTTCCGGGEEESSCCEEECTTCCCCSTTCCCCS---SBCC-SSEEEEEECEEETT
T ss_pred CHHHHHHHHHHHHHHhccccccccccccccccccccccCceEeccCCcCceeccCCCC---Cccc-CCEEEEEEeEeeCC
Confidence 9999999998753321 22 2 2578999999999999 99999875 8998 99999999999999
Q ss_pred eecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHc--CC--CCccCcccccccCCccc
Q 005915 515 GTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI--GL--DYRHGTGHGVGAALNVH 590 (670)
Q Consensus 515 Y~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~--G~--~~~h~~GHgiG~~l~~h 590 (670)
|++|+||||++| |+++|+++|+++++++++++++++| |+++++|++++++++++. |+ .|.|++||||| +++|
T Consensus 292 y~sD~tRT~~v~-~~~~~~~~y~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~h 367 (444)
T 3cb6_A 292 YCSNVGRTYLFD-PDSEQQKNYSFLVALQKKLFEYCRD-GAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIG--IEFR 367 (444)
T ss_dssp EECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS--SSSC
T ss_pred EeeeeeEEEEec-CCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHhhhhhhHhhcccccccccC--cccc
Confidence 999999999998 8999999999999999999999999 999999999999999998 46 48999999999 9999
Q ss_pred cCCCcccccCCCCccccCCCEEEECceee-e---------cCcceEEEEEEEEEecCCCCCCCCCccccceeEccCCCcc
Q 005915 591 EGPQSISFRYGNMTPLVEGMIVSNEPGYY-E---------DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 660 (670)
Q Consensus 591 E~P~~i~~~~~~~~~L~~GMV~siEPgiy-~---------~~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~ 660 (670)
|.|..++ ++++.+|+|||||+||||+| . ++.+|+||||+|+||++ |+|+||.+|++
T Consensus 368 e~p~~~~--~~~~~~l~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt~~------------g~e~Lt~~p~~ 433 (444)
T 3cb6_A 368 ESSLLVN--AKNPRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQITRS------------DPIVFTDSPKA 433 (444)
T ss_dssp BGGGCCS--TTCCCBCCTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECCSS------------SCEETTCCCCS
T ss_pred CCccccC--CCCCcccCCCCEEEEEeccccccCcccccccCCceEEEEEEEEEECCC------------CceecccCCCc
Confidence 9885455 35789999999999999999 5 78899999999999999 89999999999
Q ss_pred hhHhhhh
Q 005915 661 VCHENRI 667 (670)
Q Consensus 661 ~~~i~~~ 667 (670)
+..|+.+
T Consensus 434 l~~Ie~~ 440 (444)
T 3cb6_A 434 QGDISYF 440 (444)
T ss_dssp HHHHEEC
T ss_pred HHHHHhh
Confidence 8887643
No 13
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=2.1e-58 Score=510.14 Aligned_cols=369 Identities=19% Similarity=0.247 Sum_probs=302.1
Q ss_pred ccchhHHHHHHHHHHHHHHcCCCEEEEcCc---------------ccccccccccccCCCCCceeeEEEEEeC-----Cc
Q 005915 247 YAGLDVASKLSSLRSDLVDAGSSAIVISML---------------DEIAWLLNLRGSDVPHSPVMYAYLIVEM-----DR 306 (670)
Q Consensus 247 ~s~~e~~~Rl~rlr~~M~e~glDallis~~---------------~ni~YLtGf~g~~~~~~P~~~~~llvt~-----~~ 306 (670)
++..++.+|+++|++.|++++ +++|++.+ .|++|||||...+ ++++++. ++
T Consensus 3 ~~~~e~~~R~~~l~~~m~~~~-~~ll~~~~~~~r~~D~~y~frq~~n~~YltG~~~~~--------~~lvi~~~~~~~~~ 73 (440)
T 2v3z_A 3 ISRQEFQRRRQALVEQMQPGS-AALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPE--------AVLVLIKSDDTHNH 73 (440)
T ss_dssp CCHHHHHHHHHHHHHHSCSSE-EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCCSS--------CEEEEEECSSSCEE
T ss_pred CCHHHHHHHHHHHHHhcccCC-EEEEECCCccccCCCCCCcccCCCCEEEecCCCCCC--------EEEEEEecCCCCce
Confidence 467899999999999999888 79999876 8999999996433 5777754 47
Q ss_pred eEEEEeCCCCCHHH--------HhhhhcCCe-EEEecccHHHHHHHHHhcCCEEEEeCCCchH---HHHHHHHHHHHHhh
Q 005915 307 AKLFVDDSKVTPDV--------MDHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVNA---AIMNTYEIAIEKYL 374 (670)
Q Consensus 307 ~~Lfvd~~~~~~~~--------~~~l~~~~v-~i~~y~~~~~~l~~l~~~~~rIgve~~~~s~---~~~~~L~~~~~~~~ 374 (670)
++||++..+...+. .......++ .+.+++++.+.|+++..+.++|+++....+. .....+......
T Consensus 74 ~~Lf~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~-- 151 (440)
T 2v3z_A 74 SVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKG-- 151 (440)
T ss_dssp EEEEECCCCHHHHHHHCCCCHHHHHHHHHTCSEEEEGGGHHHHHHHHHTTCSEEECCTTSCHHHHHHHHHHHHHHHTC--
T ss_pred EEEEecCCCcccceecCCCCCHHHHHHhcCCCEEeeHHHHHHHHHHHHcCCCEEEEeCCcccchhHHHHHHHHHHhhh--
Confidence 89999865432111 000111123 5678899988888876556799998764221 111222211000
Q ss_pred hcccccccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHH
Q 005915 375 TSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDV 454 (670)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~ei 454 (670)
. + ....++.+++++.+++..+|+|||++||+.||+|+++++.++.++++++ +||+||.|+
T Consensus 152 --~------~------~~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~tE~el 211 (440)
T 2v3z_A 152 --S------R------QNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKC------RPGMFEYHL 211 (440)
T ss_dssp --G------G------GTCCCCSEEECCHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHH
T ss_pred --c------c------cccCCcceeeeHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHH
Confidence 0 0 0011456789999999999999999999999999999999999998887 899999999
Q ss_pred HHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEc-CCCCHHHH
Q 005915 455 ADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAREK 533 (670)
Q Consensus 455 a~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~v-G~p~~e~~ 533 (670)
++.++... ...|+.+.+|++|+++|+|++.+|+.|++ ++|++||+|++|+|++|+||++|+||||++ |+|+++|+
T Consensus 212 ~~~~~~~~-~~~G~~~~~f~~iv~~G~n~~~~H~~~~~---~~l~~gd~vliD~G~~~~gy~sD~tRT~~v~G~~~~~~~ 287 (440)
T 2v3z_A 212 EGEIHHEF-NRHGARYPSYNTIVGSGENGCILHYTENE---CEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQR 287 (440)
T ss_dssp HHHHHHHH-HHTTCCEESSCCEEEEGGGGGSTTCCCCC---SBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHH
T ss_pred HHHHHHHH-HHcCCCcCCCCCeEEEcCccccccCCCCC---ccccCCCEEEEEeeEEECCEEEeeEEEEEeCCCCCHHHH
Confidence 99997653 45688889999999999999999999875 899999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHH----cC--------------C--CCccCcccccccCCccccCC
Q 005915 534 ECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWK----IG--------------L--DYRHGTGHGVGAALNVHEGP 593 (670)
Q Consensus 534 ~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~----~G--------------~--~~~h~~GHgiG~~l~~hE~P 593 (670)
++|++++++++++++++|| |+++++|++++++++.+ .| + .|.|++||||| |++||.|
T Consensus 288 ~~y~~v~~a~~~~i~~~~p-G~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiG--l~~he~p 364 (440)
T 2v3z_A 288 EIYDIVLESLETSLRLYRP-GTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLG--LDVHDVG 364 (440)
T ss_dssp HHHHHHHHHHHHHHHHCCT-TCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCS--SSSSCCS
T ss_pred HHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCC--cccccCC
Confidence 9999999999999999999 99999999999998853 34 3 47999999999 9999999
Q ss_pred CcccccCCCCccccCCCEEEECceeeecC---------cceEEEEEEEEEecCCCCCCCCCccccceeEcc-CCCcchhH
Q 005915 594 QSISFRYGNMTPLVEGMIVSNEPGYYEDH---------AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLT-FVPIQVCH 663 (670)
Q Consensus 594 ~~i~~~~~~~~~L~~GMV~siEPgiy~~~---------~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT-~~P~~~~~ 663 (670)
. +.. +++.+|+|||||+||||+|.++ .+|+||||+|+||++ |+|+|| .+|+++..
T Consensus 365 ~-~~~--~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt~~------------G~e~LT~~~p~~~~~ 429 (440)
T 2v3z_A 365 V-YGQ--DRSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVITET------------GNENLTASVVKKPEE 429 (440)
T ss_dssp C-CCG--GGCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEETT------------EEEESSTTSCCSHHH
T ss_pred C-cCC--CCCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEECCC------------cCeECCcccCCCHHH
Confidence 7 432 2568999999999999999997 579999999999999 999999 59999999
Q ss_pred hhhhh
Q 005915 664 ENRIA 668 (670)
Q Consensus 664 i~~~~ 668 (670)
|+.++
T Consensus 430 Ie~~~ 434 (440)
T 2v3z_A 430 IEALM 434 (440)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
No 14
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=2.2e-57 Score=497.55 Aligned_cols=356 Identities=22% Similarity=0.268 Sum_probs=302.7
Q ss_pred cchhHHHHHHHHHHHHHHcCC-------------CEEE-EcCcccccccccccccCCCCCceeeEEEEEeC----CceEE
Q 005915 248 AGLDVASKLSSLRSDLVDAGS-------------SAIV-ISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEM----DRAKL 309 (670)
Q Consensus 248 s~~e~~~Rl~rlr~~M~e~gl-------------Dall-is~~~ni~YLtGf~g~~~~~~P~~~~~llvt~----~~~~L 309 (670)
+.++|.+|+++|.+.|.+.++ |... +....|++|||||.+.+ ++++++. ++.+|
T Consensus 2 ~~~~~~~RR~~l~~~l~~~~~~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~--------~~~v~~~~~~~~~~~l 73 (427)
T 3ig4_A 2 KSKFFAQNRERLVNTLPDESITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPN--------VIFMLKKFGNSVEETL 73 (427)
T ss_dssp CHHHHHHHHHHHHTTSCSSEEEEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTT--------CEEEEEEETTEEEEEE
T ss_pred CHHHHHHHHHHHHHhCcCCCEEEEECCCccccCCCCCCcccCCCCeEEeeCCCCCC--------EEEEEEccCCCceEEE
Confidence 457899999999999987665 4422 34456799999998766 5666654 26789
Q ss_pred EEeC----------CCCCHHHHhhhhcCCe-EEEecccHHHHHHHHHhc--CCEEEEeCC--------CchHHHHHHHHH
Q 005915 310 FVDD----------SKVTPDVMDHLKNAGV-ELRPYNSILSEIKSLAAQ--GAQLWLDPS--------SVNAAIMNTYEI 368 (670)
Q Consensus 310 fvd~----------~~~~~~~~~~l~~~~v-~i~~y~~~~~~l~~l~~~--~~rIgve~~--------~~s~~~~~~L~~ 368 (670)
|++. .++..+..... .++ .+.+.+++.+.|.++... .++|+++.. ..+...++.|++
T Consensus 74 fv~~~~~~~~~w~g~r~~~~~a~~~--~~~~~v~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~ 151 (427)
T 3ig4_A 74 FIEKSDPVMEKWVGKTVSNEEAEKI--SGIKKVIYLDSFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVRE 151 (427)
T ss_dssp EECCCCTTGGGTTCCCCCHHHHHHH--HCCSEEEEGGGHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHH
T ss_pred EecCCCccceEEeCCCCcHHHHHhc--CCCCEEEEhhhHHHHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHh
Confidence 9965 33443333222 234 466778888888887654 679999854 245667777776
Q ss_pred HHHHhhhcccccccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 005915 369 AIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAK 448 (670)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G 448 (670)
.+ |+.+++++++++..+|+|||++||+.||+|+++++.++.++++.+ +||
T Consensus 152 ~~------------------------~~~~~~~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~pG 201 (427)
T 3ig4_A 152 QY------------------------PHVTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHA------KAD 201 (427)
T ss_dssp HC------------------------TTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CSS
T ss_pred hC------------------------CCCeEeEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCC
Confidence 43 567899999999999999999999999999999999999988777 999
Q ss_pred cCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEc-CC
Q 005915 449 LTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GE 527 (670)
Q Consensus 449 ~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~v-G~ 527 (670)
+||.|+++.++... ...|+.+++|++|+++|+|++.+||.|++ ++|++||+|++|+|+.|+||++|+||||++ |+
T Consensus 202 ~tE~el~~~~~~~~-~~~G~~~~~f~~ivasG~n~~~~H~~~~~---~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~ 277 (427)
T 3ig4_A 202 MMEYELEAQFDFTL-KSSGIKHHAFNTILASGKNATVLHYEDND---AQIQNGDLVLLDLGAQKDYYNADISYTFPANGT 277 (427)
T ss_dssp EEHHHHHHHHHHHH-HHTTCCEESSCCEEEEGGGGGSTTCCCCC---SEECTTCEEEEEECEEETTEECCEEEEEETTSC
T ss_pred CCHHHHHHHHHHHH-HHcCCCCCCCCCEEEECccccccccCccc---ccCCCCCEEEEEeeeEECcEEEEEEEEEecCCC
Confidence 99999999998754 45688788999999999999999999876 899999999999999999999999999999 89
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHc----CC---------CCccCcccccccCCccccCCC
Q 005915 528 PTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI----GL---------DYRHGTGHGVGAALNVHEGPQ 594 (670)
Q Consensus 528 p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~----G~---------~~~h~~GHgiG~~l~~hE~P~ 594 (670)
++++|+++|++++++++++++++|| |+++.+|++++++++++. |+ .|.|++||+|| |++||.|.
T Consensus 278 ~s~~~~~~y~~vl~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iG--l~vhe~~~ 354 (427)
T 3ig4_A 278 FSSRQKQIYNIVLNALKETTEIIKP-GLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG--LDTHDVGT 354 (427)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCCT-TCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS--SSSSCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCC--cCCCcCCC
Confidence 9999999999999999999999999 999999999999999875 43 48899999999 99999874
Q ss_pred cccccCCCCccccCCCEEEECceeeecCcc-eEEEEEEEEEecCCCCCCCCCccccceeEccC-CCcchhHhhhhh
Q 005915 595 SISFRYGNMTPLVEGMIVSNEPGYYEDHAF-GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQVCHENRIA 668 (670)
Q Consensus 595 ~i~~~~~~~~~L~~GMV~siEPgiy~~~~~-GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~-~P~~~~~i~~~~ 668 (670)
+.+.+|+|||||+||||+|.++.+ |+||||+|+||++ |+|+||. +|+++..|+.++
T Consensus 355 ------~~~~~L~~GMV~tiEPgiy~~~~g~GvriEd~vlVt~~------------G~e~LT~~~pk~~~~IE~~m 412 (427)
T 3ig4_A 355 ------YKDRVLEEGMVITIEPGLYIEEESIGIRIEDDILVTKD------------GHENLSKDIIREVEEIEEFM 412 (427)
T ss_dssp ------CTTCBCCTTCEEEECCEEEEGGGTEEEECBEEEEECSS------------SEEETTTTSCCSHHHHHHHH
T ss_pred ------CCCCEeCCCCEEEECCEEEECCCceEEEEeeEEEEeCC------------cCeECCCCCCCCHHHHHHHH
Confidence 257899999999999999999875 9999999999999 9999997 899999998765
No 15
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=2.3e-53 Score=475.65 Aligned_cols=365 Identities=22% Similarity=0.268 Sum_probs=283.9
Q ss_pred ccccchhHHHHHHHHHHHHHHcCC----CEEEEcC-----------------cccccccccccccCCCCCceeeEEEEEe
Q 005915 245 LKYAGLDVASKLSSLRSDLVDAGS----SAIVISM-----------------LDEIAWLLNLRGSDVPHSPVMYAYLIVE 303 (670)
Q Consensus 245 ~~~s~~e~~~Rl~rlr~~M~e~gl----Dallis~-----------------~~ni~YLtGf~g~~~~~~P~~~~~llvt 303 (670)
+.++..+|.+|+++|++.|++++. |++|+.+ ..|++|||||...+ +++++.
T Consensus 17 ~~i~~~e~~~Rr~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~--------~~~vi~ 88 (494)
T 2iw2_A 17 LKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPG--------CYGVID 88 (494)
T ss_dssp CCEETHHHHHHHHHHHHHHHHCTTCCTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSS--------CEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhcccCceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCC--------eEEEEE
Confidence 578999999999999999998854 6888843 34678999997544 455663
Q ss_pred --CCceEEEEeCCCCCHHHHhhhh----------cCCe-EEEecccHHHHHHHHHhcCCEEEE----eCCCchH---HHH
Q 005915 304 --MDRAKLFVDDSKVTPDVMDHLK----------NAGV-ELRPYNSILSEIKSLAAQGAQLWL----DPSSVNA---AIM 363 (670)
Q Consensus 304 --~~~~~Lfvd~~~~~~~~~~~l~----------~~~v-~i~~y~~~~~~l~~l~~~~~rIgv----e~~~~s~---~~~ 363 (670)
.++++||++..+.. ...+.. ..++ ...+.+++.+.|+++. .+++++ +.+.... ..+
T Consensus 89 ~~~~~~~L~~~~~~~~--~~~w~g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~i~~~~g~~~~~~~~~~~~~~ 164 (494)
T 2iw2_A 89 VDTGKSTLFVPRLPAS--HATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQK--PSVLLTLRGVNTDSGSVCREASF 164 (494)
T ss_dssp TTTCCEEEEECCCCGG--GTTTTCCCCCHHHHHHHHTCSEEEEGGGHHHHHHHTC--CSCEECCCCBCTTTCCBCCCCCC
T ss_pred ccCCeEEEEECCCCHH--HhhhcCCCCCHHHHHHHhCCcccccHHHHHHHHHhcC--CCeEEEecCccccccccccHhhh
Confidence 47899999753321 111110 1122 3456677777777653 456655 2211000 000
Q ss_pred HHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005915 364 NTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEI 443 (670)
Q Consensus 364 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i 443 (670)
..+ .....+.+++..++..+|+|||++||+.||+|+++++.++.++++.+
T Consensus 165 ~~l--------------------------~~~~~~~~~~~~~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i---- 214 (494)
T 2iw2_A 165 DGI--------------------------SKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAV---- 214 (494)
T ss_dssp TTG--------------------------GGSCEECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred hhh--------------------------hhccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc----
Confidence 000 00112345566789999999999999999999999999999998877
Q ss_pred hcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCC-CCCCcccCCCCeEEEecceeECCeecceEEE
Q 005915 444 HNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPE-PGKCSVVDSKKLFLLDSGAQYVDGTTDITRT 522 (670)
Q Consensus 444 ~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~-~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT 522 (670)
+||+||.|+++.++....+..|+...+|++|+++|+|++++||.++ ..++++|++||+|++|+|+.|+||++|+|||
T Consensus 215 --~~G~tE~el~~~~~~~~~~~~G~~~~~~~~iv~sG~n~~~~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT 292 (494)
T 2iw2_A 215 --KVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCS 292 (494)
T ss_dssp --CTTCBHHHHHHHHHHHHHHHHCCCEESSCCEEEEGGGGGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEE
T ss_pred --cCCCcHHHHHHHHHHHHHHhCCCCcCCCCceEEEcCccccccccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEE
Confidence 8999999999999876554447778899999999999999998654 2234899999999999999999999999999
Q ss_pred EEc-CCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHH----cCC----------------CCccCccc
Q 005915 523 VHF-GEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWK----IGL----------------DYRHGTGH 581 (670)
Q Consensus 523 ~~v-G~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~----~G~----------------~~~h~~GH 581 (670)
|++ |+++++|+++|++++++++++++++|| |+++.||++++++++++ .|+ .|.|++||
T Consensus 293 ~~v~G~~s~~q~~~y~~v~~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GH 371 (494)
T 2iw2_A 293 FPANGKFTADQKAVYEAVLRSSRAVMGAMKP-GVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGH 371 (494)
T ss_dssp EETTSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCC
T ss_pred EEECCcCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCCCCcC
Confidence 999 899999999999999999999999999 99999999999998754 453 37899999
Q ss_pred ccccCCccccCCCcc---------cc-cCCCCccccCCCEEEECceeeec--------------------------Ccce
Q 005915 582 GVGAALNVHEGPQSI---------SF-RYGNMTPLVEGMIVSNEPGYYED--------------------------HAFG 625 (670)
Q Consensus 582 giG~~l~~hE~P~~i---------~~-~~~~~~~L~~GMV~siEPgiy~~--------------------------~~~G 625 (670)
||| |++||.|... .. ...++.+|+|||||+||||+|.+ +.+|
T Consensus 372 giG--l~vHd~~~~~~~~~~~~~p~~~~~~~~~~L~~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~gG 449 (494)
T 2iw2_A 372 FLG--IDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGG 449 (494)
T ss_dssp BCS--SSSSCSCSSCTTCCCCCSTTGGGCSCCCBCCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCE
T ss_pred CCC--cccccCCCcccccccccccccccCCCCCEeCCCCEEEECCccccccccchhhccccccccccccchhhhhCCCCE
Confidence 999 9999953110 00 01356899999999999999974 6689
Q ss_pred EEEEEEEEEecCCCCCCCCCccccceeEccCCCcchhHhhhhh
Q 005915 626 IRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVCHENRIA 668 (670)
Q Consensus 626 vriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~~i~~~~ 668 (670)
|||||+|+||++ |+|+||.+|+++..|+.++
T Consensus 450 vRiED~vlVte~------------G~e~LT~~p~~~~~ie~~m 480 (494)
T 2iw2_A 450 VRIEEDVVVTDS------------GIELLTCVPRTVEEIEACM 480 (494)
T ss_dssp EECBEEEEECSS------------SEEECCCCCCSHHHHHHHH
T ss_pred EEeeeEEEEcCC------------cCeECCCCCCcHHHHHHHH
Confidence 999999999999 9999999999999887654
No 16
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=100.00 E-value=7.9e-52 Score=456.20 Aligned_cols=351 Identities=19% Similarity=0.189 Sum_probs=269.9
Q ss_pred hHHHHHHHHHHHHHHcCCCEEEEcCccccccccc-----ccccCC-----CCC--ceeeEEEEEeC-CceEEEEeCC-CC
Q 005915 251 DVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLN-----LRGSDV-----PHS--PVMYAYLIVEM-DRAKLFVDDS-KV 316 (670)
Q Consensus 251 e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtG-----f~g~~~-----~~~--P~~~~~llvt~-~~~~Lfvd~~-~~ 316 (670)
..+.+.+|+++.|++.+.|+++|.++.++.|++| |+.... .+. |- ++|++.. +++.||+... .+
T Consensus 11 ~~~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~~frq~~~f~yl~g~~e~p~--~~L~~~~~~~~~l~~~~~~d~ 88 (451)
T 3rva_A 11 HIEELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPN--CWLVVNGVDKPTLIFYRPEDF 88 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTCSCCSCSS--CEEEECSSSCCEEEEECCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCcccCCCceEEeccCCCCC--EEEEEecCCCeEEEeeccHHh
Confidence 3456778899999999999999999999999998 554310 111 21 5677743 4677777532 11
Q ss_pred CHH----HHhh-hhcCCe-EEEecccHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCC
Q 005915 317 TPD----VMDH-LKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDT 390 (670)
Q Consensus 317 ~~~----~~~~-l~~~~v-~i~~y~~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 390 (670)
... ..+. ....+| .+.+.+++.+.|..+ ..++++.......+.+..+
T Consensus 89 w~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~~~~~~g~~~~~~~~~~~------------------------ 141 (451)
T 3rva_A 89 WHKVPPEPNDFWTDSFDIKLLQQADAVEKFLPYD---KSRFAYVGEYIEVAKALGF------------------------ 141 (451)
T ss_dssp TSCCCCSCCSTTGGGSEEEEESSGGGGGGGSCSC---GGGEEEESSCHHHHHHHTC------------------------
T ss_pred hhccccCcchhHHhccCeEEEecHHHHHHHHhhc---cCceEEEccCcCHHHhhhh------------------------
Confidence 100 0011 112233 233334454444332 2355666544332211000
Q ss_pred CCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCC
Q 005915 391 TGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD 470 (670)
Q Consensus 391 ~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~ 470 (670)
...+++++.++|..+|+|||++||+.||+|+++++.++.++++.+ +||+||.|+++.+... ...|..+
T Consensus 142 ----~~~~~~~~~~~l~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i------~pG~tE~el~~~~~~~--~~~g~~~ 209 (451)
T 3rva_A 142 ----DNVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAF------REGKSEFDINLAYAAA--SRQGDND 209 (451)
T ss_dssp ----SCBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHH------HTTCCHHHHHHHHHHH--HTCCTTT
T ss_pred ----cccCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh------hcCCCHHHHHHHHHHH--HHcCCCc
Confidence 124567888999999999999999999999999999999988877 8999999999987653 2457778
Q ss_pred CCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCC--CHHHHHHHHHHHHHHHHHHH
Q 005915 471 TSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEP--TAREKECFTRVLQGHIALDQ 548 (670)
Q Consensus 471 ~~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p--~~e~~~~~~~v~~a~~a~~~ 548 (670)
.+|++|+++|+|++++||.|++ .+.+++||+|++|+|+.|+||++|+||||++|++ +++++++|+++++++.++++
T Consensus 210 ~~f~~IVasG~naa~~H~~~~~--~~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~aai~ 287 (451)
T 3rva_A 210 VPYTSIVALNEHASILHYMQCD--TVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVD 287 (451)
T ss_dssp SSSCCEEEEGGGGGCTTCCCCC--SSCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCcEEEECCcccccCCCCCC--CcccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999976 2347999999999999999999999999999987 78999999999999999999
Q ss_pred hhCCCCCChhHHHHHHHHHHH-----------------HcCC---CCccCcccccccCCccccCCCccccc---------
Q 005915 549 AIFPQSTPGFVLDAFARSSLW-----------------KIGL---DYRHGTGHGVGAALNVHEGPQSISFR--------- 599 (670)
Q Consensus 549 ~~~P~G~~~~ev~~~a~~~l~-----------------~~G~---~~~h~~GHgiG~~l~~hE~P~~i~~~--------- 599 (670)
++|| |+++.||++++++++. +.|+ .|.|++||||| |++||.|.+....
T Consensus 288 ~ikP-G~~~~di~~aa~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiG--ldvHe~p~~~~~~~g~~~~~~~ 364 (451)
T 3rva_A 288 SLKP-GVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLG--LQVHDVGGLVNDDRGTPKPAPD 364 (451)
T ss_dssp HCCT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCS--SSSSCTTTTBSSTTCCBCCCCT
T ss_pred HhCC-CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCccccc--CCcccCcccccccccccccccc
Confidence 9999 9999999999999875 5566 48999999999 9999998743210
Q ss_pred --C--CCCccccCCCEEEECceeeec-------------------------CcceEEEEEEEEEecCCCCCCCCCccccc
Q 005915 600 --Y--GNMTPLVEGMIVSNEPGYYED-------------------------HAFGIRIENLLYVKEVGTPNRFGGVSYLG 650 (670)
Q Consensus 600 --~--~~~~~L~~GMV~siEPgiy~~-------------------------~~~GvriED~v~Vte~g~~~~~~~~~~lG 650 (670)
+ ++..+|+||||||||||+|.+ +.|||||||+|+||++ |
T Consensus 365 ~~~~l~~~~~L~~GMV~TIEPGiY~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGvRIED~vlVT~~------------G 432 (451)
T 3rva_A 365 DHPFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRD------------K 432 (451)
T ss_dssp TCTTCCCCCBCCTTCEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSS------------C
T ss_pred ccccCCCCCCcCCCCEEEECCEEeEchhhhhhhcccccccccccchhhhcCCCCEEEcccEEEECCC------------c
Confidence 1 356899999999999999983 5679999999999999 9
Q ss_pred eeEccCCCc
Q 005915 651 FEKLTFVPI 659 (670)
Q Consensus 651 ~E~LT~~P~ 659 (670)
+|+||..|.
T Consensus 433 ~e~LT~~~~ 441 (451)
T 3rva_A 433 NENMTRDLD 441 (451)
T ss_dssp EEEHHHHTT
T ss_pred ceECCCCCC
Confidence 999998543
No 17
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=4e-50 Score=446.39 Aligned_cols=351 Identities=19% Similarity=0.180 Sum_probs=267.9
Q ss_pred hHHHHHHHHHHHHHHcCCCEEEEcCccccccccc-----ccccCC-----CC--CceeeEEEEEeC-CceEEEEeCC-CC
Q 005915 251 DVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLN-----LRGSDV-----PH--SPVMYAYLIVEM-DRAKLFVDDS-KV 316 (670)
Q Consensus 251 e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtG-----f~g~~~-----~~--~P~~~~~llvt~-~~~~Lfvd~~-~~ 316 (670)
..+.+.+|+++.|++.+.|+++|.++.++.|++| |+.... ++ .|- +++++.. +++.||+... ++
T Consensus 11 h~~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~pFrq~s~F~yl~g~~e~p~--~~l~~~~~~~~~l~~~~~~d~ 88 (517)
T 3l24_A 11 HIATLQKRTREIIERENLDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPH--CWIVANGTDKPKLIFYRPVDF 88 (517)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTSSCCSCSS--CEEEECSSSCCEEEEECCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCceecCCceEEeccCCCCC--EEEEEecCCCeEEEEecchhh
Confidence 3456778899999999999999999999999988 554320 11 121 5677743 4677776532 11
Q ss_pred CHH----HHh-hhhcCCe-EEEecccHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCC
Q 005915 317 TPD----VMD-HLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDT 390 (670)
Q Consensus 317 ~~~----~~~-~l~~~~v-~i~~y~~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 390 (670)
... ..+ +....+| .+.+.+++.+.|..+ ..++++.......+.+..+
T Consensus 89 w~g~~~~~~~~~~~~~~v~~~~~~~~~~~~L~~~---~~~~~~~g~~~~~~~~~~~------------------------ 141 (517)
T 3l24_A 89 WHKVPDEPNEYWADYFDIELLVKPDQVEKLLPYD---KARFAYIGEYLEVAQALGF------------------------ 141 (517)
T ss_dssp SSCCCCCCCSGGGGGSEEEEESSGGGCGGGSCSC---CTTEEEESSCHHHHHHHTC------------------------
T ss_pred hhccccCchhhhhhccCeEEEcCHHHHHHHHhhc---cCceEEEcCCcCHHHhhhh------------------------
Confidence 100 001 1122233 233334444444322 3455666544332211000
Q ss_pred CCCCCCCcceecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCC
Q 005915 391 TGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD 470 (670)
Q Consensus 391 ~~~~~~~~~vd~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~ 470 (670)
...+++++.++|..+|+|||++||+.||+|+++++.++..+++.+ +||+||.|+++.+... ...|..+
T Consensus 142 ----~~~~~~~~~~~l~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~i------kpG~tE~el~~~~~~~--~~~g~~~ 209 (517)
T 3l24_A 142 ----ELMNPEPVMNFYHYHRAYKTQYELACMREANKIAVQGHKAARDAF------FQGKSEFEIQQAYLLA--TQHSEND 209 (517)
T ss_dssp ----CCBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHH------HTTCCHHHHHHHHHHH--HTCCGGG
T ss_pred ----ccCCchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHH--HHcCCCc
Confidence 124567888999999999999999999999999999999988877 8999999999887643 2456667
Q ss_pred CCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhh
Q 005915 471 TSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAI 550 (670)
Q Consensus 471 ~~f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~ 550 (670)
.+|++|+++|+|++++||.|++ .+.+++||+|++|+|+.|+||++|+||||++|++ ++++++|++++++++++++++
T Consensus 210 ~sf~~IVasG~naa~~H~~p~~--~~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~~-~e~~~ly~~vl~Aq~aai~~i 286 (517)
T 3l24_A 210 NPYGNIVALNENCAILHYTHFD--RVAPATHRSFLIDAGANFNGYAADITRTYDFTGE-GEFAELVATMKQHQIALMNQL 286 (517)
T ss_dssp SSSCCEEEEGGGGGCTTCCCCC--SSCCSSCCEEEEEEEEEETTEEEEEEEEEESSSC-SHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcCCEEEEccccccccCCCCC--CccccCCCEEEEeecEEECCEEEEeEEEEEcCCC-HHHHHHHHHHHHHHHHHHHHc
Confidence 8999999999999999999976 2347999999999999999999999999999975 789999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHH-----------------HcCC---CCccCcccccccCCccccCCCccccc-----------
Q 005915 551 FPQSTPGFVLDAFARSSLW-----------------KIGL---DYRHGTGHGVGAALNVHEGPQSISFR----------- 599 (670)
Q Consensus 551 ~P~G~~~~ev~~~a~~~l~-----------------~~G~---~~~h~~GHgiG~~l~~hE~P~~i~~~----------- 599 (670)
|| |++++||++++++++. +.|+ +|.|++||||| |++||.|.+....
T Consensus 287 kP-Gv~~~dI~~aa~~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiG--LdvHE~p~~~~~~~g~~~~~~~~~ 363 (517)
T 3l24_A 287 AP-GKLYGELHLDCHQRVAQTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIG--LQVHDVGGFMADEQGAHQEPPEGH 363 (517)
T ss_dssp CT-TCBHHHHHHHHHHHHHHHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCS--SSSSCCCCTTC-------------
T ss_pred CC-CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCCCCCC--cccccCcccccccccccccccccc
Confidence 99 9999999999998874 4454 58999999999 9999998733210
Q ss_pred --CCCCccccCCCEEEECceeeec-------------------------CcceEEEEEEEEEecCCCCCCCCCcccccee
Q 005915 600 --YGNMTPLVEGMIVSNEPGYYED-------------------------HAFGIRIENLLYVKEVGTPNRFGGVSYLGFE 652 (670)
Q Consensus 600 --~~~~~~L~~GMV~siEPgiy~~-------------------------~~~GvriED~v~Vte~g~~~~~~~~~~lG~E 652 (670)
.+++.+|+||||||||||+|.+ +.|||||||+|+||++ |+|
T Consensus 364 p~l~~~~~Le~GMV~TIEPGiY~~~~~l~~~~~~~~~~~~~~~~~~~~~g~GGVRIED~VlVT~~------------G~e 431 (517)
T 3l24_A 364 PFLRCTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHED------------SLE 431 (517)
T ss_dssp --CCTTCBCCTTEEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSS------------CEE
T ss_pred ccCCCCccccCCcEEEECCEEeechhhhhhhcccccccccccchhhhcCCCCEEEEeeEEEECCC------------cCe
Confidence 0356899999999999999983 5679999999999999 999
Q ss_pred EccC-CCcc
Q 005915 653 KLTF-VPIQ 660 (670)
Q Consensus 653 ~LT~-~P~~ 660 (670)
+||. +|.+
T Consensus 432 ~LT~~~~~~ 440 (517)
T 3l24_A 432 NMTRELRLR 440 (517)
T ss_dssp EHHHHTTCC
T ss_pred eCCCccchh
Confidence 9996 7766
No 18
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=5.8e-48 Score=398.85 Aligned_cols=233 Identities=18% Similarity=0.161 Sum_probs=208.3
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCCC
Q 005915 409 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGANG 483 (670)
Q Consensus 409 lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~-----~~f~~iv~sG~~~ 483 (670)
||.|||++||+.||+|++++++++..+++.+ +||+||.|+++.++.+.. ..|+.. .+|++++++|.|+
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~i------kpG~tE~el~~~~~~~~~-~~G~~~~~~~~~~~~~~v~~g~~~ 73 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFI------KPGITSWDIEVFVRDFIE-SHGGVAAQIGYEGYKYATCCSIND 73 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHH-HTTCEETTTTGGGCCCSEEEEETT
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhC------cCCCCHHHHHHHHHHHHH-HcCCCcccccccCCCcceEECCcc
Confidence 6899999999999999999999999888777 999999999999987654 345432 3577899999999
Q ss_pred ccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHH
Q 005915 484 AIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAF 563 (670)
Q Consensus 484 a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~ 563 (670)
+.+|+.|++ ++|++||+|++|+|+.|+||++|+||||++|+++++|+++|+++++++.++++++|| |++++||+++
T Consensus 74 ~~~H~~~~~---~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kp-G~~~~di~~a 149 (264)
T 3tb5_A 74 EICHGFPRK---KVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQV-GNRIGDIGHA 149 (264)
T ss_dssp EEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHH
T ss_pred cccCCCCCC---ccccCCCEEEEeccceecceeeecccccccCCccHHHHHHHHHHHHHHHHHHhhhCC-CCCHHHHHHH
Confidence 999999986 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCCC-CccCcccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeeec-----------------Ccc
Q 005915 564 ARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYED-----------------HAF 624 (670)
Q Consensus 564 a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~~-----------------~~~ 624 (670)
+++++++.|+. +.|++|||+| +.+||.|.+... .++++.+|+|||||+||||+|.+ +.+
T Consensus 150 ~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~d~wt~~~~~g~~ 227 (264)
T 3tb5_A 150 IQTYVEGEGYGVVRDFVGHGIG--PTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGL 227 (264)
T ss_dssp HHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCC
T ss_pred HHHHHHHcCCceeeeceecCCC--CCCccCCccCccccCCCCCCccCCcEEEEeeeEEcCCCceEEcCCCCeEEecCCcc
Confidence 99999999995 7899999999 999999973222 23467899999999999999964 456
Q ss_pred eEEEEEEEEEecCCCCCCCCCccccceeEccCCCcchhHhhh
Q 005915 625 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVCHENR 666 (670)
Q Consensus 625 GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~~i~~ 666 (670)
|+||||+|+||++ |+|+||..|+++..|++
T Consensus 228 gvriEd~vlVT~~------------G~e~LT~~p~el~~ie~ 257 (264)
T 3tb5_A 228 SCQYEHSLAITKE------------GPRILTSQGEELTYLEH 257 (264)
T ss_dssp EEECCEEEECCTT------------CCEETTCCSSTTCC---
T ss_pred EEEeceEEEEcCC------------cCEECCCCCcchhhhhc
Confidence 9999999999999 89999999999988764
No 19
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=1.2e-47 Score=400.67 Aligned_cols=235 Identities=18% Similarity=0.137 Sum_probs=210.4
Q ss_pred eecCCcccccc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCC-----CC
Q 005915 400 VFRTSPIAFSK--AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TS 472 (670)
Q Consensus 400 vd~~~~i~~lR--~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~-----~~ 472 (670)
.+..+++..+| +|||++||+.||+|++++++++..+++++ +||+||.|+++.++..+. ..|... .+
T Consensus 20 ~~~~~~i~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i------~~G~tE~el~~~~~~~~~-~~G~~~~~~~~~~ 92 (286)
T 3tav_A 20 GSMVGLFGRKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAA------KAGVSTLELDQVAESVIR-EAGAVPSFLGYHG 92 (286)
T ss_dssp ---CCTTCSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHH-HTTCEETTTTGGG
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHH-HcCCcccccccCC
Confidence 35578899999 99999999999999999999999988777 999999999999988654 455543 37
Q ss_pred CceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q 005915 473 FDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFP 552 (670)
Q Consensus 473 f~~iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P 552 (670)
|++++++|+|++.+|+.|++ +++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+++++++++++++++|
T Consensus 93 f~~iv~~g~n~~~~H~~p~~--~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp 170 (286)
T 3tav_A 93 FPASICSSVNDQVVHGIPSA--TAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPSDEALSEATRLSMEAGIAAMIP 170 (286)
T ss_dssp CCSSEEEEETTBCSCCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred CCCceEEecCccccCCCCCC--CcccCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 89999999999999999972 3899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHH----HHc--CCC-CccCcccccccCCccccCCCccccc-CCCCccccCCCEEEECceeeec---
Q 005915 553 QSTPGFVLDAFARSSL----WKI--GLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYED--- 621 (670)
Q Consensus 553 ~G~~~~ev~~~a~~~l----~~~--G~~-~~h~~GHgiG~~l~~hE~P~~i~~~-~~~~~~L~~GMV~siEPgiy~~--- 621 (670)
|+++++|++++++++ ++. ||. +.|++||||| +++||.|.+.++. ++++.+|++||||+||||+|.+
T Consensus 171 -G~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~~~L~~GmV~tiEPgiy~~~~~ 247 (286)
T 3tav_A 171 -GNRLTDVSHAIELGTRAAEKQFDRAFGIVDGYGGHGIG--RSMHLDPFLPNEGAPGKGPLLAVGSVLAIEPMLTLGTTQ 247 (286)
T ss_dssp -TCBHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEEECS--SSSSEEEEECSSCCSSCSSBCCTTBEEEECCEEESSCSC
T ss_pred -CCCHHHHHHHHHHHHHHHHHHhcCCCcccCCcccCccc--ccccCCccccCcCCCCCCCCcCCCCEEEEcCEEEcCCCc
Confidence 999999999999999 999 885 6899999999 9999999833221 3578899999999999999975
Q ss_pred --------------CcceEEEEEEEEEecCCCCCCCCCccccceeEccCCC
Q 005915 622 --------------HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 658 (670)
Q Consensus 622 --------------~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P 658 (670)
+.+|+|+||+|+||++ |+|+||..|
T Consensus 248 ~~~~~~~w~~~t~dg~~gvriEd~v~Vt~~------------G~e~LT~~p 286 (286)
T 3tav_A 248 TRVLADDWTVVTTDGSRAAHWEHTVAVTEA------------GPRILTMRP 286 (286)
T ss_dssp EEECTTSSCEEETTCCCEEECBEEEECCTT------------SCEESSCCC
T ss_pred eEecCCCceEEecCCCcEEEeeeEEEECCC------------cceeCCCCC
Confidence 4679999999999999 899999877
No 20
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=8.9e-48 Score=396.92 Aligned_cols=229 Identities=18% Similarity=0.191 Sum_probs=207.2
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCC
Q 005915 408 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGAN 482 (670)
Q Consensus 408 ~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~-----~~f~~iv~sG~~ 482 (670)
.+++|||++||+.||+|++++++++..+++++ +||+||.|+++.++..+.+ .|... .+|++++++|.|
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~pG~tE~el~~~~~~~~~~-~G~~~~~~~~~~f~~iv~~g~n 76 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFITDHV------KPNVTTNSLNDLCHNFITS-HNAIPAPLNYKGFPKSICTSIN 76 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHGGGC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSSEEEET
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHHHH-cCCcccccccCCCCcceEeccc
Confidence 47899999999999999999999999888776 8999999999999886544 45432 358889999999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHH
Q 005915 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (670)
Q Consensus 483 ~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~ 562 (670)
++++|+.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|++++++++++++++|| |+++++|++
T Consensus 77 ~~~~H~~p~~---~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~i~~ 152 (262)
T 3mx6_A 77 HVVCHGIPND---KPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRP-GAKLGDIGY 152 (262)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCST-TCBHHHHHH
T ss_pred ccccCCCCCC---cccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHH
Confidence 9999999986 899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CccCcccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeeecCcceEEE------------
Q 005915 563 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYEDHAFGIRI------------ 628 (670)
Q Consensus 563 ~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~~~~~Gvri------------ 628 (670)
++++++++.|+. +.|++||||| +++||.|.+.++ .++++.+|++||||+||||+|. +.+|+|+
T Consensus 153 ~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~-g~~gvri~~~d~w~~~~~~ 229 (262)
T 3mx6_A 153 AIQSYAEKHNYSVVRDYTGHGIG--RVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMINA-GNYDTILSKLDGWTVTTRD 229 (262)
T ss_dssp HHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEES-SCSCEEECTTTSCCEEETT
T ss_pred HHHHHHHHcCCccCCCccccccC--CcccCCCcccccCCCCCCCEeCCCCEEEEeCEEEc-CCCeEEEecCCCceEEecC
Confidence 999999999995 7899999999 999999974433 2457889999999999999997 7777777
Q ss_pred -------EEEEEEecCCCCCCCCCccccceeEccCCCcchh
Q 005915 629 -------ENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVC 662 (670)
Q Consensus 629 -------ED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~ 662 (670)
||+|+||++ |+|+||..|+++.
T Consensus 230 ~~~~~~~Ed~v~Vt~~------------G~e~LT~~p~~l~ 258 (262)
T 3mx6_A 230 KSLSAQFEHTIGVTKD------------GFEIFTLSPKKLD 258 (262)
T ss_dssp CCCEEECBEEEEECSS------------SEEESCCCTTCCC
T ss_pred CCceeeeceEEEECCC------------cCeECCCCCcccC
Confidence 999999999 9999999999875
No 21
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=1e-46 Score=393.36 Aligned_cols=224 Identities=21% Similarity=0.224 Sum_probs=203.9
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCC
Q 005915 408 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGAN 482 (670)
Q Consensus 408 ~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~-----~~f~~iv~sG~~ 482 (670)
.+|++||++||+.||+|++++++++..+++++ ++|+||.|+++.++.++.+ .|... .+|++++++|.|
T Consensus 37 ~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i------~pG~tE~el~~~~~~~~~~-~G~~~~~~~~~~f~~iv~~g~n 109 (285)
T 3pka_A 37 SEPWVQTPEVIEKMRVAGRIAAGALAEAGKAV------APGVTTDELDRIAHEYLVD-NGAYPSTLGYKGFPKSCCTSLN 109 (285)
T ss_dssp CSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSSEEEET
T ss_pred cceecCCHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCcHHHHHHHHHHHHHH-cCCccccccccCCCCceEeccc
Confidence 69999999999999999999999999888777 8999999999999887544 45432 368899999999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHH
Q 005915 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (670)
Q Consensus 483 ~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~ 562 (670)
++.+|+.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+++++++++++++++| |++++||++
T Consensus 110 ~~~~H~~p~~---~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~di~~ 185 (285)
T 3pka_A 110 EVICHGIPDS---TVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKP-GRALSVIGR 185 (285)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TSBTTHHHH
T ss_pred ceeecCCCCC---cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHH
Confidence 9999999975 899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CccCcccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeeec-----------------Cc
Q 005915 563 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYED-----------------HA 623 (670)
Q Consensus 563 ~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~~-----------------~~ 623 (670)
++++++++.|+. +.|++||||| +++||.|.+.++ .++++.+|++||||+||||+|.+ +.
T Consensus 186 ~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~gw~~~~~~g~ 263 (285)
T 3pka_A 186 VIESYANRFGYNVVRDFTGHGIG--TTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRK 263 (285)
T ss_dssp HHHHHHHTTTCEECCSSCEEBCS--SSSSCSCEECSSCCTTCCCBCCTTBEEEECCEEESSCSCEEECTTSCCEEETTCC
T ss_pred HHHHHHHHcCCccCCCcccccCC--CcccCCCcccCccCCCCCCccCCCCEEEEcCEEEcCCCceeecCCCceEEecCCC
Confidence 999999999995 8999999999 999999983322 13478899999999999999974 46
Q ss_pred ceEEEEEEEEEecCCCCCCCCCccccceeEccC
Q 005915 624 FGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (670)
Q Consensus 624 ~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~ 656 (670)
+|+|+||+|+||++ |+|+||.
T Consensus 264 ~gvriEdtv~Vt~~------------G~e~LT~ 284 (285)
T 3pka_A 264 WTAQFEHTLLVTDT------------GVEILTC 284 (285)
T ss_dssp CEEECBEEEEECSS------------SEEESSC
T ss_pred cEEEEeeEEEECCC------------cCeECCC
Confidence 78999999999999 8999995
No 22
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=1.6e-46 Score=387.94 Aligned_cols=231 Identities=16% Similarity=0.173 Sum_probs=207.1
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCC-----CCCCceeEeeCCCC
Q 005915 409 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGANG 483 (670)
Q Consensus 409 lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~-----~~~f~~iv~sG~~~ 483 (670)
+|++||++||+.||+|++++.+++..+++.+ +||+||.|+++.++.......|.. ..+|++++++|.|+
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~~g~n~ 74 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPYV------KPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINE 74 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGGC------STTCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSEEEETT
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHHHHHhCCccccccccCCCcceEecccc
Confidence 6899999999999999999999998876655 899999999999988723445543 24799999999999
Q ss_pred ccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHH
Q 005915 484 AIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAF 563 (670)
Q Consensus 484 a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~ 563 (670)
+++|+.|++ +++|++||+|++|+|++|+||++|+||||++|+|+++|+++|++++++++++++++|| |+++++|+++
T Consensus 75 ~~~H~~p~~--~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~v~~~ 151 (263)
T 2gg2_A 75 VVCHGIPDD--AKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKP-GINLREIGAA 151 (263)
T ss_dssp EEECCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHH
T ss_pred cccCCCCCC--CcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHH
Confidence 999999864 3789999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCCC-CccCcccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeeec-----------------Ccc
Q 005915 564 ARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYED-----------------HAF 624 (670)
Q Consensus 564 a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~~-----------------~~~ 624 (670)
+++++++.|+. +.|.+||||| +++||.|.+.++ .++++.+|++||||+||||+|.+ +.+
T Consensus 152 ~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~l~~Gmv~tiEPgi~~~~~~~~~~~~~~~~~~~~g~~ 229 (263)
T 2gg2_A 152 IQKFVEAEGFSVVREYCGHGIG--RGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSL 229 (263)
T ss_dssp HHHHHHHTTCEECSSCCEEECS--SSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCC
T ss_pred HHHHHHHcCCEECCCcccccCC--cceecCCcccCccCCCCCCCcCCCCEEEEecEEEcCCCceEEcCCCceEEecCCCe
Confidence 99999999996 7899999999 999999974433 23467899999999999999963 457
Q ss_pred eEEEEEEEEEecCCCCCCCCCccccceeEccCCCcchh
Q 005915 625 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQVC 662 (670)
Q Consensus 625 GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~~~ 662 (670)
|+|+||+|+||++ |+|+||..|+++.
T Consensus 230 g~riEdtvlVt~~------------G~e~LT~~p~~l~ 255 (263)
T 2gg2_A 230 SAQYEHTIVVTDN------------GCEILTLRKDDTI 255 (263)
T ss_dssp EEECBEEEEEETT------------EEEESSCCTTCCS
T ss_pred EEEEEEEEEECCC------------ccEEeCCCCcccC
Confidence 9999999999999 9999999998764
No 23
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=5.4e-46 Score=383.55 Aligned_cols=225 Identities=24% Similarity=0.230 Sum_probs=202.1
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCC
Q 005915 407 AFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGA 481 (670)
Q Consensus 407 ~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~-----~~f~~iv~sG~ 481 (670)
..+|++||++||+.||+|++++.+++..+++.+ +||+||.|+++.++..+.+ .|... .+|++++++|.
T Consensus 11 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~pG~te~el~~~~~~~~~~-~G~~~~~~~~~~f~~~v~~g~ 83 (262)
T 1o0x_A 11 HHMIRIKTPSEIEKMKKAGKAVAVALREVRKVI------VPGKTAWDVETLVLEIFKK-LRVKPAFKGYGGYKYATCVSV 83 (262)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGC------STTCBHHHHHHHHHHHHHH-HTCEESSTTGGGCCCSEEEEE
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCcHHHHHHHHHHHHHH-cCCccccccccCCCcceEecc
Confidence 469999999999999999999999998777655 8999999999999987554 34421 47888999999
Q ss_pred CCccccccCCCCCCcc-cCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHH
Q 005915 482 NGAIIHYKPEPGKCSV-VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVL 560 (670)
Q Consensus 482 ~~a~~h~~p~~~~~~~-i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev 560 (670)
|++++|+.|++ ++ |++||+|++|+|++|+||++|+||||++|+|+++|+++|++++++++++++++|| |+++++|
T Consensus 84 n~~~~H~~p~~---~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~v 159 (262)
T 1o0x_A 84 NEEVVHGLPLK---EKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKP-GIRLGDV 159 (262)
T ss_dssp TTBCSCCCCCT---TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCT-TSBHHHH
T ss_pred cccccCCCCCC---CcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHH
Confidence 99999999975 88 9999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHcCCC-CccCcccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeee-----------------c
Q 005915 561 DAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYE-----------------D 621 (670)
Q Consensus 561 ~~~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~-----------------~ 621 (670)
++++++++++.|+. +.|++||||| +++||.|.+.++ .++++.+|+|||||+||||+|. +
T Consensus 160 ~~~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~L~~Gmv~tiEPgi~~g~~~v~~~~~~w~~~~~~ 237 (262)
T 1o0x_A 160 SHCIQETVESVGFNVIRDYVGHGVG--RELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVD 237 (262)
T ss_dssp HHHHHHHHHHTTCEECCSSCEEECS--SSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETT
T ss_pred HHHHHHHHHHcCCcccCCcccCccc--ccccCCCccCCCCCCCCCCccCCCCEEEECCEEEcCCCceeecCCCceEEeeC
Confidence 99999999999996 7899999999 999999974332 1346889999999999999997 3
Q ss_pred CcceEEEEEEEEEecCCCCCCCCCccccceeEccC
Q 005915 622 HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (670)
Q Consensus 622 ~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~ 656 (670)
+.+|+|+||+|+||++ |+|+||.
T Consensus 238 g~~gvriEdtvlVt~~------------G~e~LT~ 260 (262)
T 1o0x_A 238 GSRCAHFEHTILITEN------------GAEILTK 260 (262)
T ss_dssp CCCEEECBEEEEECSS------------SEEESSC
T ss_pred CCcEEEEEEEEEECCC------------ccEeCCC
Confidence 5679999999999999 8999995
No 24
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=4.2e-46 Score=397.29 Aligned_cols=231 Identities=18% Similarity=0.196 Sum_probs=207.6
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCC-----CCCCceeEeeCCC
Q 005915 408 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGAN 482 (670)
Q Consensus 408 ~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~-----~~~f~~iv~sG~~ 482 (670)
..++|||++||+.||+|++++++++..+++++ +||+||.||++.++.++.+ .|+. ..+|++++++|.|
T Consensus 99 ~~~~IKs~~EIe~mR~A~~ia~~al~~~~~~i------kpGvTE~El~~~~~~~~~~-~Ga~ps~l~y~~Fp~iv~sg~N 171 (368)
T 3s6b_A 99 SDIYVNNEEEIQRIREACILGRKTLDYAHTLV------SPGVTTDEIDRKVHEFIIK-NNAYPSTLNYYKFPKSCCTSVN 171 (368)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSEEEEET
T ss_pred CCceeCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHH-cCCccccccccCCCCeEEEcCc
Confidence 46899999999999999999999999888777 9999999999999887544 5543 2469999999999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcC---CCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhH
Q 005915 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFG---EPTAREKECFTRVLQGHIALDQAIFPQSTPGFV 559 (670)
Q Consensus 483 ~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG---~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~e 559 (670)
++++|+.|++ ++|++||+|++|+|++|+||++|+||||++| +++++|+++|++++++++++++++|| |+++++
T Consensus 172 ~~i~H~~p~~---r~L~~GDiV~iD~G~~~~GY~sDitRT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikP-G~~~~d 247 (368)
T 3s6b_A 172 EIVCHGIPDY---RPLKSGDIINIDISVFYKGVHSDLNETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKP-GMFYKN 247 (368)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCT-TCBTHH
T ss_pred cccccCCCCC---ccccCCCEEEEEEeEEECcEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccC-CCcHHH
Confidence 9999999975 8999999999999999999999999999999 89999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHcCCC-CccCcccccccCCccccCCCccccc-CCCCccccCCCEEEECceeee-----------------
Q 005915 560 LDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYE----------------- 620 (670)
Q Consensus 560 v~~~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~~-~~~~~~L~~GMV~siEPgiy~----------------- 620 (670)
|++++++++++.|+. +.|++||||| +++||.|.+..+. .+...+|++||||+||||+|.
T Consensus 248 I~~aa~~~i~~~G~~~~~~~~GHGIG--~~vHE~P~i~~~~~~~~~~~L~~GMVfTIEPgiy~~~~~~~~~~d~wt~~t~ 325 (368)
T 3s6b_A 248 IGTLIDAYVSKKNFSVVRSYSGHGVG--KLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMINQGHYSDVLWPDQWTSATS 325 (368)
T ss_dssp HHHHHHHHHHTTTCEECCSCCEEECS--SSSSEEEEECSSSSCCCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEET
T ss_pred HHHHHHHHHHHcCCCcccceeeCCCC--ccccCCCccccccCCCCCCEECCCCEEEEcCeEEcCcccccccCCCceeEee
Confidence 999999999999996 8899999999 9999999743322 234679999999999999996
Q ss_pred cCcceEEEEEEEEEecCCCCCCCCCccccceeEccC-CCcchhH
Q 005915 621 DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQVCH 663 (670)
Q Consensus 621 ~~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~-~P~~~~~ 663 (670)
+|.+|+|+||+|+||++ |+|+||. .|++..+
T Consensus 326 dG~~gvriEdtVlVTe~------------G~EvLT~~~pk~~~~ 357 (368)
T 3s6b_A 326 DGKLSAQFEHTLLITNN------------GVEILTKRTQDSPPL 357 (368)
T ss_dssp TCCCEEECBEEEEEETT------------EEEETTCCCTTCCCC
T ss_pred CCccEEEEeEEEEEcCC------------cCeECCCCCCCCcCc
Confidence 35689999999999999 9999996 6766543
No 25
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=7.8e-46 Score=395.28 Aligned_cols=242 Identities=15% Similarity=0.105 Sum_probs=210.7
Q ss_pred ecCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCC-----CCCCCce
Q 005915 401 FRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGF-----LDTSFDT 475 (670)
Q Consensus 401 d~~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~-----~~~~f~~ 475 (670)
...+.+...|.|||++||+.||+|++++++++..+++.+ +||+||.|+++.++++..+ .|+ ...+|++
T Consensus 52 ~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~a~~~~~~~i------kpG~te~el~~~~~~~~~~-~g~~~~~~~~~~fp~ 124 (337)
T 4fuk_A 52 KVYNIQFLHDDSKKTAEIQRIKTVCQLSREVLDIATAAA------KPGITTDELDRIVHEATVE-RNMYPSPLNYYGFPK 124 (337)
T ss_dssp CCCCCTTTTCTTC--CHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCS
T ss_pred ccccchhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHH-cCCCccCCCCCCcCc
Confidence 445666778999999999999999999999999988877 9999999999998876544 343 3468999
Q ss_pred eEeeCCCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 005915 476 ISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQST 555 (670)
Q Consensus 476 iv~sG~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~ 555 (670)
++++|.|++.+|+.|++ ++|++||+|++|+|+.|+||++|+||||++|+++++++++|+.+++++.+++++++| |+
T Consensus 125 iv~~g~n~~~~H~~~~~---~~l~~GD~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kp-G~ 200 (337)
T 4fuk_A 125 SVCTSVNEVICHGIPDS---RELEEGDILNIDVSSYLNGFHGDLNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKP-EA 200 (337)
T ss_dssp SSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCST-TC
T ss_pred eeeccccccccCCCCCC---ccccCCCEEEEecceeECCEEEeeeeeEEeCCccHHHHHHHHHHHHHHHHHHhhccc-cc
Confidence 99999999999999986 999999999999999999999999999999999999999999999999999999999 99
Q ss_pred ChhHHHHHHHHHHHHcCCC-CccCcccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeeec------------
Q 005915 556 PGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYED------------ 621 (670)
Q Consensus 556 ~~~ev~~~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~~------------ 621 (670)
+++++++++++++.+.|+. +.|++||||| +.+||.|..... .+++..+|+||||||||||+|.+
T Consensus 201 ~~~di~~~~~~~~~~~g~~~~~~~~GHGIG--~~~he~p~~~~~~~~~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt 278 (337)
T 4fuk_A 201 LYKQVGDAIEACASQYQCSVVRTYTGHGVG--HLFHTSPTVCHYANNKSLGMMRPGHVFTIEPMINLGTWQDVTWPDKWT 278 (337)
T ss_dssp BTTHHHHHHHHHHHTTTCEECSSEEEEECS--SSSSEEEEECCSCC---CCBCCTTCEEEECCEEESSCSCEEECTTSSC
T ss_pred cHHHHHHHHHHHHHHhcCCcccCcccCCCC--CccccCCcccccccCCCCCEeCCCCEEEECCeeEcCCCcceEcCCCCe
Confidence 9999999999999999995 7899999999 999998874332 12466799999999999999974
Q ss_pred -----CcceEEEEEEEEEecCCCCCCCCCccccceeEccCC----CcchhHhhhh
Q 005915 622 -----HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFV----PIQVCHENRI 667 (670)
Q Consensus 622 -----~~~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~~----P~~~~~i~~~ 667 (670)
+.+|+|+||+|+||++ |+|+||.. |+....|+..
T Consensus 279 ~~t~dg~~gvriEd~VlVTe~------------G~EvLT~~p~~~P~~~~eie~~ 321 (337)
T 4fuk_A 279 STTKDGRRSAQFEHTMVVTNG------------GVEIFTDWVDGVPTYQKQLKEW 321 (337)
T ss_dssp EEETTCCCEEECBEEEEECSS------------SEEESSCCSSSCCHHHHHHHHH
T ss_pred EEecCCceEEEeccEEEEcCC------------cCEECCCCCCCCCCCHHHHHhh
Confidence 5579999999999999 99999985 4455566554
No 26
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=1.2e-45 Score=379.03 Aligned_cols=223 Identities=21% Similarity=0.221 Sum_probs=200.8
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCC-----CCceeEeeCCCCccc
Q 005915 412 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDT-----SFDTISGSGANGAII 486 (670)
Q Consensus 412 vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~-----~f~~iv~sG~~~a~~ 486 (670)
|||++||+.||+|++++.+++..+++.+ +||+||.|+++.++....+ .|.... +|++++++|.|++++
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~te~el~~~~~~~~~~-~g~~~~~~~~~~f~~~v~~g~n~~~~ 75 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAAT------KPGITTKELDNIAKELFEE-YGAISAPIHDENFPGQTCISVNEEVA 75 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHH-HTCEEHHHHHHCCSSSSEEEETTEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCcHHHHHHHHHHHHHH-cCCcccccccCCCCcceEEcCCcccc
Confidence 9999999999999999999998877666 8999999999999886544 454322 788899999999999
Q ss_pred cccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCH-HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHH
Q 005915 487 HYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTA-REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (670)
Q Consensus 487 h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~-e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~ 565 (670)
|+.|++ ++|++||+|++|+|++|+||++|+||||++|++++ +|+++|++++++++++++++|| |+++++|+++++
T Consensus 76 H~~p~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~kp-G~~~~~i~~~~~ 151 (252)
T 1qxy_A 76 HGIPSK---RVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKP-GTKLSNIGKAVH 151 (252)
T ss_dssp CCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHHHHHTTCCT-TCBTHHHHHHHH
T ss_pred CCCCCC---cCcCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHH
Confidence 999975 89999999999999999999999999999999999 9999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CccCcccccccCCccccCC-Cccccc-CCCCccccCCCEEEECceeee-----------------cCcce
Q 005915 566 SSLWKIGLD-YRHGTGHGVGAALNVHEGP-QSISFR-YGNMTPLVEGMIVSNEPGYYE-----------------DHAFG 625 (670)
Q Consensus 566 ~~l~~~G~~-~~h~~GHgiG~~l~~hE~P-~~i~~~-~~~~~~L~~GMV~siEPgiy~-----------------~~~~G 625 (670)
+++++.|+. +.|++||||| +++||.| .+.++. ++++.+|++||||+|||++|. ++.+|
T Consensus 152 ~~~~~~g~~~~~~~~GHgiG--~~~he~p~~i~~~~~~~~~~~l~~Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g 229 (252)
T 1qxy_A 152 NTARQNDLKVIKNLTGHGVG--LSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFV 229 (252)
T ss_dssp HHHHHTTCEECTTCCEEECS--SSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESSCSSCEECSSSSCEECTTCCCE
T ss_pred HHHHHcCCEecCCccccccC--cccccCCccccCCCCCCCCCCccCCCEEEEecEEEcCCCceEecCCCceEEecCCCcE
Confidence 999999995 7899999999 9999999 643332 346789999999999999996 45689
Q ss_pred EEEEEEEEEecCCCCCCCCCccccceeEccCCCcc
Q 005915 626 IRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 660 (670)
Q Consensus 626 vriED~v~Vte~g~~~~~~~~~~lG~E~LT~~P~~ 660 (670)
+|+||+|+||++ | |+||..|++
T Consensus 230 ~riEdtvlVt~~------------G-e~Lt~~p~~ 251 (252)
T 1qxy_A 230 AQIEHTVIVTKD------------G-PILTTKIEE 251 (252)
T ss_dssp EEEEEEEECCTT------------C-CEETTCC--
T ss_pred EEEEEEEEECCC------------c-eEccCCCCC
Confidence 999999999999 9 999999986
No 27
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=3.5e-45 Score=387.55 Aligned_cols=229 Identities=17% Similarity=0.148 Sum_probs=205.5
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCC
Q 005915 408 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGAN 482 (670)
Q Consensus 408 ~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~-----~~f~~iv~sG~~ 482 (670)
.+|.|||++||+.||+|++++++++..+++++ +||+||.||++.++....+ .|+.. .+|++++++|.|
T Consensus 71 ~~~~iKs~~EI~~mR~A~~ia~~al~~~~~~i------~pGvte~el~~~~~~~~~~-~G~~~~~~~y~~fp~iv~sg~n 143 (329)
T 2b3h_A 71 SQIKLLSSEDIEGMRLVCRLAREVLDVAAGMI------KPGVTTEEIDHAVHLACIA-RNCYPSPLNYYNFPKSCCTSVN 143 (329)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSSEEEET
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHh------hCCCcHHHHHHHHHHHHHH-cCCccccccccCCCCeEEecCC
Confidence 57999999999999999999999999887776 9999999999999987544 45432 469999999999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHH
Q 005915 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (670)
Q Consensus 483 ~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~ 562 (670)
++++|+.|++ ++|++||+|++|+|+.|+||++|+||||++|+++++|+++|++++++++++++++|| |++++||++
T Consensus 144 ~~~~H~~p~~---~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~ai~~~kP-G~~~~dI~~ 219 (329)
T 2b3h_A 144 EVICHGIPDR---RPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKP-GVRYRELGN 219 (329)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TCBTTHHHH
T ss_pred CCcCCCCCCC---cCCCCCCEEEEEeeEEECCEEEeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcHHHHHH
Confidence 9999999975 899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CccCcccccccCCccccCCCcccccC-CCCccccCCCEEEECceeee-----------------cCc
Q 005915 563 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRY-GNMTPLVEGMIVSNEPGYYE-----------------DHA 623 (670)
Q Consensus 563 ~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~~~-~~~~~L~~GMV~siEPgiy~-----------------~~~ 623 (670)
++++++++.|+. +.|.+||||| +++||.|.+..+.. +...+|++||||+||||+|. +|.
T Consensus 220 ~~~~~~~~~G~~~~~~~~GHGIG--~~~HE~P~i~~~~~~~~~~~L~~GMVftIEPgiy~~~~~~~~~~d~w~~~~~~G~ 297 (329)
T 2b3h_A 220 IIQKHAQANGFSVVRSYCGHGIH--KLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGK 297 (329)
T ss_dssp HHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECCSSSCCCCCBCCTTCEEEECCEEESSCCCEEECTTSCCEEETTCC
T ss_pred HHHHHHHHcCCCccCCcccCCcC--cccccCCcccccccCCCCCEECCCCEEEEeCCcCcCcccccccCCCceeEeeCCe
Confidence 999999999996 8899999999 99999997433221 12479999999999999995 366
Q ss_pred ceEEEEEEEEEecCCCCCCCCCccccceeEccC-C-Ccch
Q 005915 624 FGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-V-PIQV 661 (670)
Q Consensus 624 ~GvriED~v~Vte~g~~~~~~~~~~lG~E~LT~-~-P~~~ 661 (670)
+|+|+||+|+||++ |+|+||. . |+..
T Consensus 298 ~g~riEdtvlVTe~------------G~evLT~~~~~k~~ 325 (329)
T 2b3h_A 298 RSAQFEHTLLVTDT------------GCEILTRRLDSARP 325 (329)
T ss_dssp CEEECBEEEEECSS------------SEEETTCCSSCSSC
T ss_pred EEEEEeeEEEEcCC------------eeEECCCCCCCCCC
Confidence 89999999999999 9999997 3 6654
No 28
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=1.2e-38 Score=346.30 Aligned_cols=203 Identities=9% Similarity=0.029 Sum_probs=173.4
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhC---------CCCCCCCcee
Q 005915 406 IAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQS---------GFLDTSFDTI 476 (670)
Q Consensus 406 i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~---------G~~~~~f~~i 476 (670)
+..+|+|||++||+.||+|++++..++..+.+.+ +||+||.||++.++.++.... ...+.+|+++
T Consensus 13 v~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~i------kpGvte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~~~ 86 (401)
T 2q8k_A 13 EQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEAS------SSGVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTS 86 (401)
T ss_dssp -CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHC------C-CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEEE
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHHHcCChhhcccccccCCCCCCcE
Confidence 6789999999999999999999999998877766 999999999999887654321 1234566544
Q ss_pred EeeCCCCccccccCCCC-CCcccCCCCeEEEecceeECCeecceEEEEEcC-----CCCHHHHHHHHHHHHHHHHHHHhh
Q 005915 477 SGSGANGAIIHYKPEPG-KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFG-----EPTAREKECFTRVLQGHIALDQAI 550 (670)
Q Consensus 477 v~sG~~~a~~h~~p~~~-~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG-----~p~~e~~~~~~~v~~a~~a~~~~~ 550 (670)
++ .|.+++||.|.+. ++++|++||+|+||+|++|+||++|+||||++| +|+++++++|+++++++.++++++
T Consensus 87 vS--~N~~v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~~ 164 (401)
T 2q8k_A 87 IS--VNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLV 164 (401)
T ss_dssp EE--ETTEEECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHC
T ss_pred Ee--CCcccccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 43 8999999999432 248999999999999999999999999999999 899999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHHcCCC-CccCcccccccCCccccCCCcccccC-------CCCccccCCCEEEECceee
Q 005915 551 FPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRY-------GNMTPLVEGMIVSNEPGYY 619 (670)
Q Consensus 551 ~P~G~~~~ev~~~a~~~l~~~G~~-~~h~~GHgiG~~l~~hE~P~~i~~~~-------~~~~~L~~GMV~siEPgiy 619 (670)
+| |++++||+.++++++++.||. +.+.+||||| +.+||.|..+...+ +++.+|++||||+|||+++
T Consensus 165 kP-G~~~~dI~~ai~~~~~~~G~~~v~~~~GHGIG--~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~ 238 (401)
T 2q8k_A 165 KP-GNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLK--QHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVS 238 (401)
T ss_dssp ST-TCBHHHHHHHHHHHHHTTTCEECTTCEEEEEB--TTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEE
T ss_pred CC-CCcHHHHHHHHHHHHHHcCCeecCCcccccCC--CccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceE
Confidence 99 999999999999999999995 6688999999 99999995222211 2567999999999999987
No 29
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=100.00 E-value=2.8e-37 Score=322.99 Aligned_cols=201 Identities=16% Similarity=0.102 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCC
Q 005915 416 AELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKC 495 (670)
Q Consensus 416 ~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~~~~~f~~iv~sG~~~a~~h~~p~~~~~ 495 (670)
+||+.||+|+++++.++..+++++ +||+||.|+++.++.... ..|+. ++|+++++ .|...+|+.|+..++
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i------~pG~te~el~~~~~~~~~-~~G~~-~~fp~~vs--~n~~~~H~~p~~~~~ 70 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLA------RPGMLLLELAESIEKMIM-ELGGK-PAFPVNLS--INEIAAHYTPYKGDT 70 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHH-HTTCE-ESSCCEEE--ETTEEECCCCCTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHHH-HcCCC-CCCCcEEe--eCCccccccCCCCCC
Confidence 489999999999999999888777 999999999999998754 45654 78998876 467789999975445
Q ss_pred cccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-
Q 005915 496 SVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD- 574 (670)
Q Consensus 496 ~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~- 574 (670)
++|++||+|++|+|+.|+||++|+||||++|+ +++++|+++++++.+++++++| |++++||++++++++++.|+.
T Consensus 71 ~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~---~~~~l~~~~~~a~~~~i~~~kp-G~~~~dI~~a~~~~~~~~G~~~ 146 (295)
T 1xgs_A 71 TVLKEGDYLKIDVGVHIDGFIADTAVTVRVGM---EEDELMEAAKEALNAAISVARA-GVEIKELGKAIENEIRKRGFKP 146 (295)
T ss_dssp CBCCTTCEEEEEEEEEETTEEEEEEEEEETTS---CCCHHHHHHHHHHHHHHHHCST-TCBTHHHHHHHHHHHHTTTCEE
T ss_pred ccccCCCEEEEEEeEEECCEEEEEEEEEEeCH---HHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHCCCeE
Confidence 89999999999999999999999999999997 7899999999999999999999 999999999999999999996
Q ss_pred CccCcccccccCCccccCCCcccccCCC-CccccCCCEEEECceeeecCcceEEEEEEE
Q 005915 575 YRHGTGHGVGAALNVHEGPQSISFRYGN-MTPLVEGMIVSNEPGYYEDHAFGIRIENLL 632 (670)
Q Consensus 575 ~~h~~GHgiG~~l~~hE~P~~i~~~~~~-~~~L~~GMV~siEPgiy~~~~~GvriED~v 632 (670)
+.|++|||||+ +++||.|.+.++..++ +.+|+|||||+|||++| +|.+++|+|+..
T Consensus 147 ~~~~~GHgIG~-l~~He~p~ip~~~~~~~~~~L~~GmV~tIEP~i~-~G~g~v~~~~~~ 203 (295)
T 1xgs_A 147 IVNLSGHKIER-YKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFAT-IGAGQVIEVPPT 203 (295)
T ss_dssp CTTCCEEECBT-TBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEE-SSCSCEEEEEEE
T ss_pred ECCCcCCCCCC-cccCCCCcCCccCCCCCCCEeCCCCEEEEcceeE-CCCCEEEECCce
Confidence 78999999984 5899999754433334 78999999999999999 788888876543
No 30
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=100.00 E-value=9.4e-36 Score=326.48 Aligned_cols=199 Identities=17% Similarity=0.205 Sum_probs=173.0
Q ss_pred cccccc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHh---hCCC-CCCCCceeEeeC
Q 005915 407 AFSKAV--KNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---QSGF-LDTSFDTISGSG 480 (670)
Q Consensus 407 ~~lR~v--Ks~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~---~~G~-~~~~f~~iv~sG 480 (670)
..+|++ ||++||+.||+|++++..++..+.+.+ +||+||.||++.++..... ..|+ .+.+|+++++.
T Consensus 153 eelR~i~iKs~~EIe~mR~A~~Ia~~al~~~~~~i------kpGvTe~ELa~~le~~~~~~i~~~Ga~~g~~FP~ivSv- 225 (478)
T 1b6a_A 153 EEKKALDQASEEIWNDFREAAEAHRQVRKYVMSWI------KPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSL- 225 (478)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC------CTTSBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEEEE-
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhhc------CCCCcHHHHHHHHHHHHHHHHHhcCCcccCCCCeEEEC-
Confidence 345655 999999999999999999998887766 9999999999988875432 2454 45689888754
Q ss_pred CCCccccccCCCCCCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHH
Q 005915 481 ANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVL 560 (670)
Q Consensus 481 ~~~a~~h~~p~~~~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev 560 (670)
|...+|+.|+..++++|++||+|+||+|++|+||++|++|||+|| ++++++|+++++++.+++++++| |+++++|
T Consensus 226 -N~~v~Hg~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg---~e~~~L~eav~eA~~aaI~~~kP-G~~~~dI 300 (478)
T 1b6a_A 226 -NNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFN---PKYDTLLKAVKDATNTGIKCAGI-DVRLCDV 300 (478)
T ss_dssp -TTEEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSS---GGGHHHHHHHHHHHHHHHHHCCT-TCBHHHH
T ss_pred -CCccccCCCCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcC-CCCHHHH
Confidence 778899999743348999999999999999999999999999997 68999999999999999999999 9999999
Q ss_pred HHHHHHHHHHcCCC----------CccCccccc-ccCCccccCCCcccccCCCCccccCCCEEEECceee
Q 005915 561 DAFARSSLWKIGLD----------YRHGTGHGV-GAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY 619 (670)
Q Consensus 561 ~~~a~~~l~~~G~~----------~~h~~GHgi-G~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy 619 (670)
+.++++++++.|+. +.|++|||| | +++||.|.+..+.+++..+|++||||+|||++|
T Consensus 301 ~~ai~~~i~~~G~~l~g~~~~~~~v~h~~GHGIGG--l~iHE~P~vP~~~~~~~~~Le~GMVftIEP~i~ 368 (478)
T 1b6a_A 301 GEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQ--YRIHAGKTVPIVKGGEATRMEEGEVYAIETFGS 368 (478)
T ss_dssp HHHHHHHHHTCEEEETTEEEECEECTTCEEEEEBT--TBSCCSCEEESSSSCCCCBCCTTCEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcccccccceeecCcceeCCCC--ccccCCCccceecCCCCCEeCCCCEEEEeCeeE
Confidence 99999999999973 679999999 8 899998865555556789999999999999988
No 31
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=100.00 E-value=2.2e-35 Score=315.16 Aligned_cols=210 Identities=12% Similarity=0.057 Sum_probs=180.9
Q ss_pred CCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCCC---CCCCCceeEee
Q 005915 403 TSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGF---LDTSFDTISGS 479 (670)
Q Consensus 403 ~~~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G~---~~~~f~~iv~s 479 (670)
+..+..++ ..|++||+.||+|++++.+++..+.+.+ +||+||.|+++.++....+..+. .+.+|++++
T Consensus 33 ~~~~~~~~-~~s~~EI~~mR~A~~I~~~a~~~~~~~i------kpG~te~El~~~ie~~~~~~g~~~~~~~~aFpt~~-- 103 (360)
T 2nw5_A 33 SRNMEIEN-FTESDILQDARRAAEAHRRARYRVQSIV------RPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGM-- 103 (360)
T ss_dssp TTSCEECC-CCCCHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEE--
T ss_pred cHHHHHHh-hCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHHHHhcCCCccCccccCcee--
Confidence 33343333 3499999999999999999998887776 99999999999998765443332 356788764
Q ss_pred CCCCccccccCCCCC-CcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChh
Q 005915 480 GANGAIIHYKPEPGK-CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGF 558 (670)
Q Consensus 480 G~~~a~~h~~p~~~~-~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ 558 (670)
|.|.+.+|+.|+..+ +++|++||+|+||+|++|+||++|+||||++| ++++++|+++++|+++++++++| |++++
T Consensus 104 s~N~~~~H~~P~~~d~~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v~---~~~~~l~~av~eA~~aai~~~kP-Gv~~~ 179 (360)
T 2nw5_A 104 SMNSCAAHYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFK---ENLEPLLVAAREGTETGIKSLGV-DVRVC 179 (360)
T ss_dssp EETTEEECCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECC---GGGHHHHHHHHHHHHHHHHHCCT-TCBHH
T ss_pred eccccccCCCCCcccCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcC---HHHHHHHHHHHHHHHHHHHHhcC-CCcHH
Confidence 689999999998533 58999999999999999999999999999995 58999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHcCC----------CCccCcccccccCC-ccccCCCcccccCCCCccccCCCEEEECceeeecCcceEE
Q 005915 559 VLDAFARSSLWKIGL----------DYRHGTGHGVGAAL-NVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIR 627 (670)
Q Consensus 559 ev~~~a~~~l~~~G~----------~~~h~~GHgiG~~l-~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~~~~Gvr 627 (670)
||+++++++++++|+ .+.|.+||||| + ++||.|.+.+..++++.+|++||||+|||++| +|.|++|
T Consensus 180 dI~~ai~~vi~~~G~~~~g~~~~~~~v~~~~GHgIG--~y~iHe~P~I~~~~~~~~~~Le~GmV~aIEP~i~-~G~G~Vr 256 (360)
T 2nw5_A 180 DIGRDINEVISSYEVEIGGRMWPIRPISDLHGHSIS--QFRIHGGISIPAVNNRDTTRIKGDSFYAVETFAT-TGKGSID 256 (360)
T ss_dssp HHHHHHHHHHTTCEEECSSSEEECEECTTCCEEEEB--TTBSCCSCEECSSCCCCCCBCCSSEEEEEEEEEE-SSCSCCE
T ss_pred HHHHHHHHHHHHcCCccccccccccccCCeeEeeec--CceeccCCEeccccCCCCcEEeCCcEEEEeceEE-CCcceEE
Confidence 999999999999986 25699999999 8 99999985444556889999999999999999 8999998
Q ss_pred E
Q 005915 628 I 628 (670)
Q Consensus 628 i 628 (670)
-
T Consensus 257 ~ 257 (360)
T 2nw5_A 257 D 257 (360)
T ss_dssp E
T ss_pred e
Confidence 4
No 32
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=99.97 E-value=1.5e-30 Score=278.64 Aligned_cols=202 Identities=12% Similarity=0.062 Sum_probs=166.3
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHhhCC---CCCCCCceeEeeCC
Q 005915 405 PIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSG---FLDTSFDTISGSGA 481 (670)
Q Consensus 405 ~i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i~~~~G~TE~eia~~~~~~~~~~~G---~~~~~f~~iv~sG~ 481 (670)
-...+|.+|+++||+.||+|++++.++++.+.+.+ +||+|+.||++.++++..+..+ +.+.+||+.+ +.
T Consensus 32 ~~~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~i------kpG~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ci--Sv 103 (358)
T 3fm3_A 32 RNMEIENFTESDILQDARRAAEAHRRARYRVQSIV------RPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGM--SM 103 (358)
T ss_dssp TSCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEE--EE
T ss_pred hHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCcHHHHHHHHHHHHHHhcCCCcccCCCCCcEE--ee
Confidence 34679999999999999999999999998877766 9999999999999876543322 2245787544 45
Q ss_pred CCccccccCCCC-CCcccCCCCeEEEecceeECCeecceEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCChhHH
Q 005915 482 NGAIIHYKPEPG-KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVL 560 (670)
Q Consensus 482 ~~a~~h~~p~~~-~~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p~~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev 560 (670)
|....|+.|... ++++|++||+|.||+|+.|+||++|+|||+.+|+.. +++++++.+++.+++++++| |++..++
T Consensus 104 N~~v~Hg~P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~~~---~~l~~~~~~al~aai~~~~p-G~~~~di 179 (358)
T 3fm3_A 104 NSCAAHYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKENL---EPLLVAAREGTETGIKSLGV-DVRVCDI 179 (358)
T ss_dssp TTEEECCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGGG---HHHHHHHHHHHHHHHHHCCT-TCBHHHH
T ss_pred CCEEEecCCCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEeccccccc---hhHHHHHHHHHHHHHHhhhc-CCccccc
Confidence 777889998632 358999999999999999999999999999999644 45677888999999999999 9999999
Q ss_pred HHHHHHHHHHcCCC----------CccCcccccccCCccccCCCcccccCCCCccccCCCEEEECceee
Q 005915 561 DAFARSSLWKIGLD----------YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY 619 (670)
Q Consensus 561 ~~~a~~~l~~~G~~----------~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~~GMV~siEPgiy 619 (670)
..++++++.+.|+. +.+.+|||||++ ..||.|.+.+...+...+|++||||+|||.+.
T Consensus 180 g~ai~~v~~~~~~~v~~~~~~~~~v~~~~GHgiG~~-~~he~~~ip~~~~~~~~~le~GmV~tIEP~is 247 (358)
T 3fm3_A 180 GRDINEVISSYEVEIGGRMWPIRPISDLHGHSISQF-RIHGGISIPAVNNRDTTRIKGDSFYAVETFAT 247 (358)
T ss_dssp HHHHHHHHTTCEEECSSSEEECEECTTCCEEEEBTT-BSCCSCEECSSCCCCCCBCCSSEEEEEEEEEE
T ss_pred cHHHHHHHhhccceeccccccccccccccccccCCc-cccCCCccCccCCCCCcEEeeeeeEEeeeeee
Confidence 99999999988752 357789999943 46888765444455778999999999999863
No 33
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=99.88 E-value=3.7e-23 Score=191.31 Aligned_cols=127 Identities=24% Similarity=0.329 Sum_probs=109.7
Q ss_pred CCHHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCceEEEEe-CCCcEEEEccccHHHHHhh
Q 005915 79 DAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVT-KDKAALWTDGRYFLQAEKQ 157 (670)
Q Consensus 79 ~~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g~lvv~-~~~~~L~td~ry~~qa~~~ 157 (670)
+.+++|+++||+.|++ +++||+||+++ .|++|||||+|++|++||+ +++++||||+||++||++|
T Consensus 8 ~~~~~Rl~~l~~~m~~--~~~da~li~~~------------~n~~yltGf~~s~g~lvv~~~~~a~l~td~Ry~~qA~~~ 73 (135)
T 3qoc_A 8 TRFLQRRRALSAQLAA--KRIDAMLVTHL------------THIRYLSGFTGSNAALIINKDLSARISTDGRYITQIAEQ 73 (135)
T ss_dssp CHHHHHHHHHHHTHHH--HTCSEEEECCH------------HHHHHHHCCCSSCCEEEEETTSCEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--CCCCEEEEcCh------------hhCeeeecccCCCeEEEEeeCCccEEEeCcHHHHHHHHh
Confidence 4567899999999999 99999999987 6999999999999999999 8999999999999999999
Q ss_pred ccCceEEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhh
Q 005915 158 LSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw 228 (670)
++ +++++..+ .+.+||.+.+..+++||||++++|++.|++|++.++. +++++++ +++|+.++
T Consensus 74 ~~-~~~i~~~~-----~~~~~l~~~~~~~~~vG~e~~~ls~~~~~~L~~~l~~-~~~lv~~--~~~v~~lR 135 (135)
T 3qoc_A 74 VP-DIESLMAR-----NCAPALLSDINGPKRVGFEADYLSVSQCEELRKSAGS-DVELIPV--TGAIEKLR 135 (135)
T ss_dssp CT-TSEEEECS-----SHHHHHHHTCCSSEEEEEETTTSBHHHHHHHHHHSCT-TEEEEEE--CSCC----
T ss_pred CC-CcEEEEeC-----cHHHHHHhcCcCCCeEEECCCcccHHHHHHHHHhccC-CcEEEEC--ccHHHHhC
Confidence 86 58887753 3678888866677899999999999999999999864 3689998 99998763
No 34
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.84 E-value=3.9e-21 Score=176.93 Aligned_cols=123 Identities=19% Similarity=0.336 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCceEEEEeCCCcEEEEccccHHHHHhhccC
Q 005915 81 PDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLSS 160 (670)
Q Consensus 81 ~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g~lvv~~~~~~L~td~ry~~qa~~~~~~ 160 (670)
+++|+++||+.|++ +++||+||+++ .|++|||||+|+.|++|+++++++||||+||.+||++|++.
T Consensus 8 ~~~Rl~~l~~~m~~--~~~da~li~~~------------~n~~YltGf~~~~~~~vv~~~~~~l~td~ry~~qa~~~~~~ 73 (132)
T 3ovk_A 8 LEQRLGHCLRQMAE--KGLEALLVTHL------------TNSYYLTGFSGTAATVLITAKRRVLITDSRYTLLAKASVEG 73 (132)
T ss_dssp HHHHHHHHHHHHHH--HTCCEEEECSH------------HHHHHHHCCCCSCCEEEEESSCEEEEECTTTHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHH--CCCCEEEEcCc------------ccceeeeCccCCCEEEEEECCccEEEECchhHHHHHHhCCC
Confidence 45899999999999 99999999998 69999999999999999999999999999999999999864
Q ss_pred ceEEEEcCCCCCCCHHHHHHhhcC--CCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhh
Q 005915 161 SWILMRSGNHGVPTTFEWLNDVLA--PGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw 228 (670)
++++... +..+++.+.+. ++++||||++ +|+..+++|++.+++ ++++++ +++|+.++
T Consensus 74 -~~v~~~~-----~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~l~~--~~~v~~--~~~v~~lR 132 (132)
T 3ovk_A 74 -FDIIESR-----TPLKVVAELLEADQIDCLGFEDQ-VSFSFYQAMQAELSG--ITLLAQ--SGFVEHLR 132 (132)
T ss_dssp -CEEEECS-----CHHHHHHHHHHHHTCCEEEEETT-SBHHHHHHHHHHCTT--CEEEEE--SSTTGGGC
T ss_pred -cEEEEeC-----CCHHHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHhhCCC--CeEEEC--chHHHHhC
Confidence 7776653 22355555543 4689999999 999999999999875 699998 99998873
No 35
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=99.84 E-value=4e-21 Score=176.31 Aligned_cols=124 Identities=19% Similarity=0.289 Sum_probs=109.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCceEEEEeCCCcEEEEccccHHHHHhhcc
Q 005915 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLS 159 (670)
Q Consensus 80 ~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g~lvv~~~~~~L~td~ry~~qa~~~~~ 159 (670)
+|++|+++||+.|++ +++||+||+++ .|++|||||+|+.|++||+.++++||||+||.+||+++++
T Consensus 3 ~~~~Rl~~lr~~m~~--~~~da~li~~~------------~ni~YltGf~~~~~~llv~~~~~~l~~d~r~~~~a~~~~~ 68 (131)
T 3il0_A 3 AMQRRLERFDAKLVQ--SGLDALLVTGQ------------NNIYYLTDFWGTNATVFITKNRRLFLTDSRYTLIAKQSVH 68 (131)
T ss_dssp CGGGHHHHHHHHHHH--HTCSEEEECSH------------HHHHHHHSCCCSSEEEEEESSCEEEEECTTSHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHH--cCCCEEEEecc------------cccEEEeCcccCCeEEEEECCCCEEEECchhHHHHHHhCC
Confidence 356799999999999 99999999998 6999999999999999999999999999999999999985
Q ss_pred CceEEEEcCCCCCCCHHHHHHhhcCC--CCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhh
Q 005915 160 SSWILMRSGNHGVPTTFEWLNDVLAP--GGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw 228 (670)
.++++.. +++.++|.+.+.. .++||||++ +|+..|++|++.+++ ++++++ +++|+.++
T Consensus 69 -~~~v~~~-----~~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~~~~--~~~v~~--~~~v~~lR 128 (131)
T 3il0_A 69 -GFDIIES-----KDPLKDIVKFVEVDKLETIGFDNQ-VSFAYYQALQAIFEG--YTLSPQ--TNFMEELR 128 (131)
T ss_dssp -SSEEEEC-----SCHHHHHHHHHHHTTCCEEEEETT-SCHHHHHHHHHHTTT--SEEEEE--SSHHHHHH
T ss_pred -CcEEEEe-----CCHHHHHHHHHHhcCCCEEEEcCC-CCHHHHHHHHhhcCC--CEEEEC--chHHHHhc
Confidence 4666654 4577888876643 379999999 999999999999865 699998 99999886
No 36
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=99.80 E-value=1.1e-19 Score=167.17 Aligned_cols=123 Identities=12% Similarity=0.157 Sum_probs=104.6
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCce----EEEEeCC-CcEEEEccccHHHHHhh
Q 005915 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG----TAVVTKD-KAALWTDGRYFLQAEKQ 157 (670)
Q Consensus 83 ~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g----~lvv~~~-~~~L~td~ry~~qa~~~ 157 (670)
+|+++||+.|++ +++||+||+++ .|++|||||+|+.+ +++|+.+ +++||||+||.+||+++
T Consensus 3 ~Rl~~l~~~m~~--~glDa~li~~~------------~ni~YlTGf~~~~~er~~~l~v~~~g~~~l~~~~~y~~~a~~~ 68 (132)
T 3ooo_A 3 SKLNRIRHHLHS--VQAELAVFSDP------------VTVNYLTGFFCDPHERQMFLFVYEDRDPILFVPALEVSRAKQS 68 (132)
T ss_dssp HHHHHHHHHHHH--TTCSEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHHHH
T ss_pred hHHHHHHHHHHH--CCCCEEEEcCc------------chHHHHhCCCCCCCcceEEEEEeCCCCEEEEEeccchHHHHhc
Confidence 699999999999 99999999998 79999999999985 7778765 79999999999999998
Q ss_pred ccCceEEEEcCCCCCCCHHHHHHhhcCC--CCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhh
Q 005915 158 LSSSWILMRSGNHGVPTTFEWLNDVLAP--GGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw 228 (670)
. ..++.... +.+++.++|.+.+.. .++||||++++|++.+++|++.++ ++++++ +++|+.++
T Consensus 69 ~--~~~v~~~~--d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~~---~~~~~~--~~~v~~lR 132 (132)
T 3ooo_A 69 V--PFPVFGYI--DSENPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQTVFD---GHFENL--TPYIQNMR 132 (132)
T ss_dssp C--SSCEEEEC--TTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHHHCC---SEEEEC--CHHHHTTC
T ss_pred C--CCcEEEEe--CCCCHHHHHHHHHhhccCCeEEEecCCcCHHHHHHHHHhCC---cceech--HHHHHhcC
Confidence 7 34444432 245788999988764 368999999999999999999986 489998 99998763
No 37
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=99.80 E-value=4.2e-20 Score=171.67 Aligned_cols=125 Identities=10% Similarity=0.128 Sum_probs=103.6
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCce----EEEEeCC-CcEEEEccccHHHHHhh
Q 005915 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG----TAVVTKD-KAALWTDGRYFLQAEKQ 157 (670)
Q Consensus 83 ~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g----~lvv~~~-~~~L~td~ry~~qa~~~ 157 (670)
+|+++||+.|++ +++||+||+++ .|++|||||+++.+ ++||+.+ +++||||+||.+||+++
T Consensus 4 ~Rl~~l~~~m~~--~glDa~li~~~------------~ni~YlTGf~~~~~er~~~llv~~~g~~~l~~~~~~~~~a~~~ 69 (140)
T 3i7m_A 4 TKLEQIQQWTAQ--HHASMTYLSNP------------KTIEYLTGFGSDPIERVLALVVFPDQDPFIFAPALEVEVIKET 69 (140)
T ss_dssp CHHHHHHHHHHH--TTCSEEEECCH------------HHHHHHHCCCCCCCSSCCEEEECSSSCCEEEEEGGGHHHHHTT
T ss_pred hHHHHHHHHHHH--cCCCEEEECCC------------CcceeecCCCCCCccceEEEEEeCCCCEEEEEecccHHHHHhc
Confidence 399999999999 99999999998 79999999999986 7888765 79999999999999998
Q ss_pred ccCceEEEEcCCCCCCCHHHHHHhhcC----CCCeEEEcCCcccHHHHHHHHHHHhcCCcEEE-EcccchhHHHhh
Q 005915 158 LSSSWILMRSGNHGVPTTFEWLNDVLA----PGGRVGIDPFLFSSDAAEELKEAIAKKNHELV-YLYDLNLVDVIW 228 (670)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv-~~~~~~lv~~lw 228 (670)
+.. .++.... +.+++.+++.+.+. +.++||||.+++|++.|++|++.+++ ++++ ++ +++|++++
T Consensus 70 ~~~-~~i~~~~--d~~~~~~~l~~~l~~~~~~~~~ig~e~~~~~~~~~~~L~~~l~~--~~~v~~~--~~~i~~lR 138 (140)
T 3i7m_A 70 GWQ-FPVIGYL--DHENPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAAQFSA--PSFDLDI--TSFIEHMR 138 (140)
T ss_dssp TCC-SCEEEEC--TTSCHHHHHHHHHHHTTCCCSEEEECTTTSCHHHHHHHHTTSSS--CEEEEEC--HHHHHHC-
T ss_pred cCc-CcEEEEc--CCCCHHHHHHHHHHHhCCCCCeEEEccCCCCHHHHHHHHHHCCC--CEEecCH--HHHHHHHH
Confidence 743 3343332 23566777766553 34899999999999999999999875 6999 98 99999886
No 38
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=99.79 E-value=1.5e-19 Score=166.19 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=104.1
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCce----EEEEeCC-CcEEEEccccHHHHHhh
Q 005915 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG----TAVVTKD-KAALWTDGRYFLQAEKQ 157 (670)
Q Consensus 83 ~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g----~lvv~~~-~~~L~td~ry~~qa~~~ 157 (670)
+|+++||+.|++ +++||+||+++ .|++|||||+|+.+ +++|+.+ +++||||+||.+||+++
T Consensus 3 ~Rl~~l~~~m~~--~glDa~li~~~------------~ni~YltGf~~~~~er~~~l~v~~~g~~~l~~~~~y~~~a~~~ 68 (132)
T 3o5v_A 3 AKLDQIRLYLDQ--KGAELAIFSDP------------VTINYLTGFFCDPHERQLFLFVYHDLAPVLFVPALEVARASQA 68 (132)
T ss_dssp HHHHHHHHHHHH--TTCCEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHHHHH--CCCCEEEEcCc------------chhhHhhCCCCCCccceEEEEEeCCCCEEEEeehhhhHHHHhc
Confidence 699999999999 99999999998 79999999999975 7888865 89999999999999998
Q ss_pred ccCceEEEEcCCCCCCCHHHHHHhhcCCC--CeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhh
Q 005915 158 LSSSWILMRSGNHGVPTTFEWLNDVLAPG--GRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw 228 (670)
+ ..++.... +.++++++|.+.+... ++||||++++|+..+++|++.++ ++++++ +++|+.++
T Consensus 69 ~--~~~i~~~~--d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~~---~~~~~~--~~~v~~lR 132 (132)
T 3o5v_A 69 I--SFPVFGYV--DSENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQTIFS---GQFNNL--TPYVQGMR 132 (132)
T ss_dssp C--CSCEEEEC--TTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHTTCC---SEEEEC--HHHHHTC-
T ss_pred C--CCcEEEEE--CCCCHHHHHHHHHhhccCCeEEEecCCCCHHHHHHHHHhCC---Cceecc--HHHHHHhC
Confidence 7 23444332 2467888998887643 68999999999999999999885 489998 99998763
No 39
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=99.77 E-value=4.7e-19 Score=163.90 Aligned_cols=125 Identities=14% Similarity=0.161 Sum_probs=106.6
Q ss_pred HHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCce----EEEEeCC-CcEEEEccccHHHHHh
Q 005915 82 DEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG----TAVVTKD-KAALWTDGRYFLQAEK 156 (670)
Q Consensus 82 ~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g----~lvv~~~-~~~L~td~ry~~qa~~ 156 (670)
++|+++||+.|++ +++||+||+++ .|++|||||+|+.+ ++||+.+ +++||||+||.+||+
T Consensus 4 ~~Rl~~lr~~m~~--~~~da~li~~~------------~ni~yltGf~g~~~er~~~lli~~~g~~~l~~d~~~~~~a~- 68 (138)
T 3pn9_A 4 MSKLQQILTYLES--EKLDVAVVSDP------------VTINYLTGFYSDPHERQMFLFVLADQEPLLFVPALEVERAS- 68 (138)
T ss_dssp CCHHHHHHHHHHH--HTCSEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHH-
T ss_pred HHHHHHHHHHHHH--CCCCEEEEcCc------------CceeeecCCCCCCccceEEEEEeCCCCEEEEEeccchhhhh-
Confidence 4699999999999 99999999998 69999999999985 7888776 899999999999999
Q ss_pred hccCceEEEEcCCCCCCCHHHHHHhhcCC--CCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhh
Q 005915 157 QLSSSWILMRSGNHGVPTTFEWLNDVLAP--GGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw 228 (670)
+... +++.... +.+++.+++.+.+.. .++||||++++|+..|+.|++.+++ +++++. +++|+.++
T Consensus 69 ~~~~-~~v~~~~--~~~~~~~~l~~~l~~~~~~~vg~e~~~~~~~~~~~l~~~~~~--~~~v~~--~~~i~~lR 135 (138)
T 3pn9_A 69 STVS-FPVVGYV--DSENPWQKIKHALPQLDFKRVAVEFDNLILTKYHGLKTVFET--AEFDNL--TPRIQRMR 135 (138)
T ss_dssp HHCS-SCEEEEC--TTSCHHHHHHHHSCCCCCCEEEECTTTCCHHHHHHHHHHSTT--CEEEEC--HHHHHHHT
T ss_pred ccCC-CcEEEEc--CCCCHHHHHHHHHHhccCCeEEEecCcCCHHHHHHHHHHCCC--Ceeeeh--HHHHHHHh
Confidence 7643 4554432 235678899887764 5799999999999999999999875 699998 99999886
No 40
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=99.73 E-value=1.1e-17 Score=153.35 Aligned_cols=126 Identities=17% Similarity=0.263 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCCceEEEEeCCCCCHHHHhhhhcCCeEE
Q 005915 252 VASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVEL 331 (670)
Q Consensus 252 ~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~~~l~~~~v~i 331 (670)
+.+|++++|+.|+++|+|++||+++.|++|||||+|++ ++++|+.++++||+| .++..+++.++. ++++
T Consensus 4 ~~~Rl~~lr~~m~~~~~da~li~~~~ni~YltGf~~~~--------~~llv~~~~~~l~~d-~r~~~~a~~~~~--~~~v 72 (131)
T 3il0_A 4 MQRRLERFDAKLVQSGLDALLVTGQNNIYYLTDFWGTN--------ATVFITKNRRLFLTD-SRYTLIAKQSVH--GFDI 72 (131)
T ss_dssp GGGHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCSS--------EEEEEESSCEEEEEC-TTSHHHHHHHCC--SSEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecccccEEEeCcccCC--------eEEEEECCCCEEEEC-chhHHHHHHhCC--CcEE
Confidence 56899999999999999999999999999999999875 789999999999999 456667766653 4677
Q ss_pred EecccHHHHHHHHHhc--CCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCccccc
Q 005915 332 RPYNSILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFS 409 (670)
Q Consensus 332 ~~y~~~~~~l~~l~~~--~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~l 409 (670)
..|.+..+.+.++... .++||+|.+ +++..++.|++.+ ++.+++++++++..+
T Consensus 73 ~~~~~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~~------------------------~~~~~v~~~~~v~~l 127 (131)
T 3il0_A 73 IESKDPLKDIVKFVEVDKLETIGFDNQ-VSFAYYQALQAIF------------------------EGYTLSPQTNFMEEL 127 (131)
T ss_dssp EECSCHHHHHHHHHHHTTCCEEEEETT-SCHHHHHHHHHHT------------------------TTSEEEEESSHHHHH
T ss_pred EEeCCHHHHHHHHHHhcCCCEEEEcCC-CCHHHHHHHHhhc------------------------CCCEEEECchHHHHh
Confidence 7777766666665432 389999999 9999999998864 467899999999999
Q ss_pred cccC
Q 005915 410 KAVK 413 (670)
Q Consensus 410 R~vK 413 (670)
|+||
T Consensus 128 R~iK 131 (131)
T 3il0_A 128 RMIK 131 (131)
T ss_dssp HC--
T ss_pred ccCC
Confidence 9998
No 41
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=99.70 E-value=2.9e-17 Score=151.58 Aligned_cols=132 Identities=14% Similarity=0.168 Sum_probs=106.6
Q ss_pred cccccchhHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEe-CCceEEEEeCCCCCHHHHh
Q 005915 244 ALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVE-MDRAKLFVDDSKVTPDVMD 322 (670)
Q Consensus 244 ~~~~s~~e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt-~~~~~Lfvd~~~~~~~~~~ 322 (670)
+.+|+..++.+|+++||+.|+++|+|++||+++.|++|||||.|++ ++++|+ +++++|||| +++..+++.
T Consensus 2 ~~~~~~~~~~~Rl~~l~~~m~~~~~da~li~~~~n~~yltGf~~s~--------g~lvv~~~~~a~l~td-~Ry~~qA~~ 72 (135)
T 3qoc_A 2 NAPLADTRFLQRRRALSAQLAAKRIDAMLVTHLTHIRYLSGFTGSN--------AALIINKDLSARISTD-GRYITQIAE 72 (135)
T ss_dssp -CCCCCCHHHHHHHHHHHTHHHHTCSEEEECCHHHHHHHHCCCSSC--------CEEEEETTSCEEEEEC-GGGHHHHHH
T ss_pred CCCcChHHHHHHHHHHHHHHHHCCCCEEEEcChhhCeeeecccCCC--------eEEEEeeCCccEEEeC-cHHHHHHHH
Confidence 3558889999999999999999999999999999999999999875 789998 899999999 577778877
Q ss_pred hhhcCCeEEEecccHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCC-Cccee
Q 005915 323 HLKNAGVELRPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGG-PAGVF 401 (670)
Q Consensus 323 ~l~~~~v~i~~y~~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vd 401 (670)
++. ++++..+.+..+.+.+.....++||+|.+.+|+..++.|++.+ ++ .++++
T Consensus 73 ~~~--~~~i~~~~~~~~~l~~~~~~~~~vG~e~~~ls~~~~~~L~~~l------------------------~~~~~lv~ 126 (135)
T 3qoc_A 73 QVP--DIESLMARNCAPALLSDINGPKRVGFEADYLSVSQCEELRKSA------------------------GSDVELIP 126 (135)
T ss_dssp HCT--TSEEEECSSHHHHHHHTCCSSEEEEEETTTSBHHHHHHHHHHS------------------------CTTEEEEE
T ss_pred hCC--CcEEEEeCcHHHHHHhcCcCCCeEEECCCcccHHHHHHHHHhc------------------------cCCcEEEE
Confidence 664 4666667666666665433567999999999999999998864 23 67899
Q ss_pred cCCcccccc
Q 005915 402 RTSPIAFSK 410 (670)
Q Consensus 402 ~~~~i~~lR 410 (670)
++++|..+|
T Consensus 127 ~~~~v~~lR 135 (135)
T 3qoc_A 127 VTGAIEKLR 135 (135)
T ss_dssp ECSCC----
T ss_pred CccHHHHhC
Confidence 999998887
No 42
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=99.68 E-value=1.3e-15 Score=163.52 Aligned_cols=126 Identities=25% Similarity=0.387 Sum_probs=107.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCceEEEEeCCCcEEEEccccHHHHHhhcc
Q 005915 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLS 159 (670)
Q Consensus 80 ~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g~lvv~~~~~~L~td~ry~~qa~~~~~ 159 (670)
++++||++||+.|++ +++|++||+++ .|++|||||+|+++++||+.++++||||+||.+||+++++
T Consensus 2 ~~~~Rl~~lr~~m~~--~giDa~lI~~~------------~ni~YLtGf~g~~~~llvt~~~~~l~~d~r~~~~a~~~~~ 67 (356)
T 3q6d_A 2 NAMEKIERLRSAFDE--AGIDGILLTNE------------HSRRYMANFTGTAGVVLISKKRAQFITDFRYVEQASKQAV 67 (356)
T ss_dssp CHHHHHHHHHTTHHH--HTCSEEEECCH------------HHHHHHHCCCSSSCEEEEESSCEEEEECGGGHHHHHHHST
T ss_pred cHHHHHHHHHHHHHH--cCCCEEEECCh------------hhceEccCCCCCCeEEEEECCCeEEEEChhhHHHHHhhCC
Confidence 567899999999999 99999999998 6999999999999999999999999999999999999875
Q ss_pred CceEEEEcCCCCCCCHHHHHHhhcC--CCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhh
Q 005915 160 SSWILMRSGNHGVPTTFEWLNDVLA--PGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWK 229 (670)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~ 229 (670)
. +++.... +++.++|.+.+. +.++||||++.+|+..++.|++.++. ++++. +++|+.++.
T Consensus 68 ~-~~v~~~~----~~~~~~l~~~l~~~~~~~igve~~~~~~~~~~~l~~~~~~---~~~~~--~~~~~~~R~ 129 (356)
T 3q6d_A 68 G-YEIVQHA----GLIIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAIDA---EFIPT--SGLVEKLRL 129 (356)
T ss_dssp T-SEEEECS----SCHHHHHHHHHHHHTCSEEEEETTTSBHHHHHHHHHHCCS---EEEEE--CSHHHHHHT
T ss_pred C-CEEEEeC----CCHHHHHHHHHHhcCCceEEEcCccCCHHHHHHHhhhccc---ceecc--hhhhhhhcc
Confidence 3 6665532 345666665553 45899999999999999999998753 89998 899998873
No 43
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.64 E-value=1.3e-15 Score=139.81 Aligned_cols=124 Identities=15% Similarity=0.235 Sum_probs=101.5
Q ss_pred hHHHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCCceEEEEeCCCCCHHHHhhhhcCCeE
Q 005915 251 DVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVE 330 (670)
Q Consensus 251 e~~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~~~~~~~~~l~~~~v~ 330 (670)
-+.+|++++|+.|+++|+|++||+++.|++|||||+|++ +++|+++++++||+| .++..++...+. +.+
T Consensus 7 ~~~~Rl~~l~~~m~~~~~da~li~~~~n~~YltGf~~~~--------~~~vv~~~~~~l~td-~ry~~qa~~~~~--~~~ 75 (132)
T 3ovk_A 7 FLEQRLGHCLRQMAEKGLEALLVTHLTNSYYLTGFSGTA--------ATVLITAKRRVLITD-SRYTLLAKASVE--GFD 75 (132)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECSHHHHHHHHCCCCSC--------CEEEEESSCEEEEEC-TTTHHHHHHHCT--TCE
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEcCcccceeeeCccCCC--------EEEEEECCccEEEEC-chhHHHHHHhCC--CcE
Confidence 367899999999999999999999999999999999865 688899999999999 567767776654 356
Q ss_pred EEecccHHHHHHHHHh--cCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCcccc
Q 005915 331 LRPYNSILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAF 408 (670)
Q Consensus 331 i~~y~~~~~~l~~l~~--~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~ 408 (670)
+..|.+-.+.+.++.. +.++||+|.+ +++..++.|++.+ ++.++++++++|..
T Consensus 76 v~~~~~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~l------------------------~~~~~v~~~~~v~~ 130 (132)
T 3ovk_A 76 IIESRTPLKVVAELLEADQIDCLGFEDQ-VSFSFYQAMQAEL------------------------SGITLLAQSGFVEH 130 (132)
T ss_dssp EEECSCHHHHHHHHHHHHTCCEEEEETT-SBHHHHHHHHHHC------------------------TTCEEEEESSTTGG
T ss_pred EEEeCCCHHHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHhhC------------------------CCCeEEECchHHHH
Confidence 6666543344444432 4789999999 9999999998864 46789999999988
Q ss_pred cc
Q 005915 409 SK 410 (670)
Q Consensus 409 lR 410 (670)
+|
T Consensus 131 lR 132 (132)
T 3ovk_A 131 LR 132 (132)
T ss_dssp GC
T ss_pred hC
Confidence 87
No 44
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=99.62 E-value=3.1e-16 Score=144.85 Aligned_cols=129 Identities=16% Similarity=0.080 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCC-ceEEEEeCCCCCHHHHhhhhcCCeEE
Q 005915 253 ASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVEL 331 (670)
Q Consensus 253 ~~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~-~~~Lfvd~~~~~~~~~~~l~~~~v~i 331 (670)
.+|++++|+.|+++|+|++||++++|++|||||+|++.. . .++++|+.+ +++||+|. ++..+++ .. .++++
T Consensus 4 ~~Rl~~lr~~m~~~~~da~li~~~~ni~yltGf~g~~~e-r---~~~lli~~~g~~~l~~d~-~~~~~a~-~~--~~~~v 75 (138)
T 3pn9_A 4 MSKLQQILTYLESEKLDVAVVSDPVTINYLTGFYSDPHE-R---QMFLFVLADQEPLLFVPA-LEVERAS-ST--VSFPV 75 (138)
T ss_dssp CCHHHHHHHHHHHHTCSEEEECCHHHHHHHHSCCCCCTT-S---CCEEEEESSSCCEEEEEG-GGHHHHH-HH--CSSCE
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCcCceeeecCCCCCCcc-c---eEEEEEeCCCCEEEEEec-cchhhhh-cc--CCCcE
Confidence 469999999999999999999999999999999997632 2 257888766 89999995 4444555 33 34556
Q ss_pred Eecc---cHHHHHHHHHh--cCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCcc
Q 005915 332 RPYN---SILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPI 406 (670)
Q Consensus 332 ~~y~---~~~~~l~~l~~--~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i 406 (670)
..|. +..+.+.++.. +.++||+|.+.+++..++.|++.+ ++.+++++++++
T Consensus 76 ~~~~~~~~~~~~l~~~l~~~~~~~vg~e~~~~~~~~~~~l~~~~------------------------~~~~~v~~~~~i 131 (138)
T 3pn9_A 76 VGYVDSENPWQKIKHALPQLDFKRVAVEFDNLILTKYHGLKTVF------------------------ETAEFDNLTPRI 131 (138)
T ss_dssp EEECTTSCHHHHHHHHSCCCCCCEEEECTTTCCHHHHHHHHHHS------------------------TTCEEEECHHHH
T ss_pred EEEcCCCCHHHHHHHHHHhccCCeEEEecCcCCHHHHHHHHHHC------------------------CCCeeeehHHHH
Confidence 6664 34455655543 257999999999999999998864 567899999999
Q ss_pred ccccccC
Q 005915 407 AFSKAVK 413 (670)
Q Consensus 407 ~~lR~vK 413 (670)
..+|+||
T Consensus 132 ~~lR~iK 138 (138)
T 3pn9_A 132 QRMRLIK 138 (138)
T ss_dssp HHHTTCC
T ss_pred HHHhhcC
Confidence 9999998
No 45
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=99.53 E-value=4.4e-13 Score=143.79 Aligned_cols=124 Identities=20% Similarity=0.300 Sum_probs=101.7
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccc-----eEecCCcCCceEEEEeCCCcEEEEccccHHHHHhh
Q 005915 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRR-----AYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQ 157 (670)
Q Consensus 83 ~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni-----~YlTGF~gs~g~lvv~~~~~~L~td~ry~~qa~~~ 157 (670)
+|+++||+.|++ +++|++||+++ .|+ +|||||+++.+++||+.++++||||+||..||+++
T Consensus 2 ~Rl~~Lr~~m~~--~~lDa~li~~~------------~ni~~~~~~YLtGf~~~~~~llI~~~~~~L~~d~r~~~~a~~~ 67 (359)
T 2zsg_A 2 DRSERLIQLISE--EGIDAFLIMNI------------ENSARASSVYFSGFTGSFSIILISENTRLLITDSRYTVQAKQE 67 (359)
T ss_dssp CCHHHHHHHHHT--TTCCEEEEEES------------TTTTHHHHHHHHCCCSSCEEEEEETTEEEEEECTTTHHHHHHH
T ss_pred hHHHHHHHHHHH--CCCcEEEEECh------------hHcccccCeeEeccCCCCEEEEEECCCCEEEECcccHHHHHhC
Confidence 589999999999 99999999998 488 99999999999999999999999999999999888
Q ss_pred ccCceEEEEcCCCCCCCHHHHHHhhcC--CCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhh
Q 005915 158 LSSSWILMRSGNHGVPTTFEWLNDVLA--PGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWK 229 (670)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~ 229 (670)
. .++++... . +.+.++|.+.+. +.++||+|++.+++..++.|++.++. .++++. +++|+.++.
T Consensus 68 -~-~~~v~~~~-~--~~~~~~l~~~L~~~~~~~vgvd~~~~~~~~~~~l~~~l~~--~~~v~~--~~~i~~lr~ 132 (359)
T 2zsg_A 68 -T-DFEVREVK-G--GDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAFGD--RKFIGI--DDEVKQMRM 132 (359)
T ss_dssp -C-CSEEEEC------CCHHHHHHHHHHTTCCEEEECGGGSBHHHHHHHHHHTTT--CEEEEC--HHHHHHHHH
T ss_pred -C-CCEEEEec-C--cchHHHHHHHHHhcCCCEEEEeCCcCCHHHHHHHHhhCCC--cEEEEC--hhhhhhhhc
Confidence 3 46766541 1 112344444432 35799999999999999999988764 589998 899999874
No 46
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=99.53 E-value=3.2e-13 Score=150.09 Aligned_cols=144 Identities=9% Similarity=0.143 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHhc--CCCCCccEEEEcCCCCC-CccccccccccceEecCCcCCceEEEEeCCCcEEEEccc---cHHHH
Q 005915 81 PDEKLRALRELFS--RPGVNIDAYIIPSQDAH-QSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGR---YFLQA 154 (670)
Q Consensus 81 ~~~Rl~~lr~~m~--~~~~~lDa~lI~~~d~h-~se~~~~~~~ni~YlTGF~gs~g~lvv~~~~~~L~td~r---y~~qa 154 (670)
..+|+++||+.|+ + +++|++||+++|+| +++|+ .+++..+|||||+++.+++||+.++++||||++ |..||
T Consensus 13 ~~~Rl~~Lr~~m~~~~--~giDa~li~~~~~~~~~~y~-~~~~~~~yLtGf~~~~~~lvVt~d~~~L~~d~~~~~y~~~a 89 (467)
T 3biq_A 13 FKKRIELLYSKYNEFE--GSPNSLLFVLGSSNAENPYQ-KTTILHNWLLSYEFPATLIALVPGKVIIITSSAKAKHLQKA 89 (467)
T ss_dssp HHHHHHHHHHHGGGST--TCCSEEEEEECSCCTTSTTC-HHHHHHHHHHSSCCSSEEEEEETTEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhh--cCCCEEEEEcCCCCCCCCCc-cchhhhhHhhCCCCCCEEEEEECCeEEEEECCcchHHHHHH
Confidence 4679999999999 9 99999999999887 68888 788888999999999999999999999999999 77899
Q ss_pred Hh--hcc--C-ceEEEEc--CCCC-CCCHHHHHHhhcCC-CCeEEEc-CCcccHHHHHHHHHHHhc----CCcEEEEccc
Q 005915 155 EK--QLS--S-SWILMRS--GNHG-VPTTFEWLNDVLAP-GGRVGID-PFLFSSDAAEELKEAIAK----KNHELVYLYD 220 (670)
Q Consensus 155 ~~--~~~--~-~~~~~~~--~~~~-~~~~~~~l~~~~~~-~~~vg~e-~~~~s~~~~~~L~~~l~~----~~~~lv~~~~ 220 (670)
++ |+. . .++++.. ...+ .+.+.++|.+.+.. +++||++ .+.+|+..++.|++.++. .+.++++.
T Consensus 90 ~~~~e~~~~~~~v~v~~~~~~~~~~~~~~~~~L~~~L~~~~~~Igv~~~~~~s~~~~~~L~~~l~~~~~~~~~~lv~~-- 167 (467)
T 3biq_A 90 IDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDI-- 167 (467)
T ss_dssp HGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHHHHHTCEEEEC--
T ss_pred hhhcccccCCCCeEEEEecccccccchhhHHHHHHHHHhhCCEEEEecCcccchhHHHHHHHHHHhhcccCCceeech--
Confidence 87 553 2 3666544 2100 01345677765532 5799995 688999999999998853 24699998
Q ss_pred chhHHHhhh
Q 005915 221 LNLVDVIWK 229 (670)
Q Consensus 221 ~~lv~~lw~ 229 (670)
.++|+.+|.
T Consensus 168 ~~~i~~lr~ 176 (467)
T 3biq_A 168 SLGLSKVWE 176 (467)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHc
Confidence 999999994
No 47
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=99.53 E-value=9.5e-15 Score=135.37 Aligned_cols=126 Identities=14% Similarity=0.081 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCC-ceEEEEeCCCCCHHHHhhhhcCCeEEEe
Q 005915 255 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVELRP 333 (670)
Q Consensus 255 Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~-~~~Lfvd~~~~~~~~~~~l~~~~v~i~~ 333 (670)
|+++||+.|+++|+|++||+++.|++|||||.++. ..+| .+++|+.+ +++||+|. ++..++++.... .++..
T Consensus 5 Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~-~er~---~~llv~~~g~~~l~~~~-~~~~~a~~~~~~--~~i~~ 77 (140)
T 3i7m_A 5 KLEQIQQWTAQHHASMTYLSNPKTIEYLTGFGSDP-IERV---LALVVFPDQDPFIFAPA-LEVEVIKETGWQ--FPVIG 77 (140)
T ss_dssp HHHHHHHHHHHTTCSEEEECCHHHHHHHHCCCCCC-CSSC---CEEEECSSSCCEEEEEG-GGHHHHHTTTCC--SCEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCcceeecCCCCCC-ccce---EEEEEeCCCCEEEEEec-ccHHHHHhccCc--CcEEE
Confidence 99999999999999999999999999999999864 2223 36777765 79999994 555566655432 34555
Q ss_pred cc---cHHHHHHHHHh----cCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcce-ecCCc
Q 005915 334 YN---SILSEIKSLAA----QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGV-FRTSP 405 (670)
Q Consensus 334 y~---~~~~~l~~l~~----~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-d~~~~ 405 (670)
|. +..+.+.++.. +.++||+|.+.+++..++.|++.+ ++++++ +++++
T Consensus 78 ~~d~~~~~~~l~~~l~~~~~~~~~ig~e~~~~~~~~~~~L~~~l------------------------~~~~~v~~~~~~ 133 (140)
T 3i7m_A 78 YLDHENPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAAQF------------------------SAPSFDLDITSF 133 (140)
T ss_dssp ECTTSCHHHHHHHHHHHTTCCCSEEEECTTTSCHHHHHHHHTTS------------------------SSCEEEEECHHH
T ss_pred EcCCCCHHHHHHHHHHHhCCCCCeEEEccCCCCHHHHHHHHHHC------------------------CCCEEecCHHHH
Confidence 53 33444444332 358999999999999999998753 567899 99999
Q ss_pred cccccc
Q 005915 406 IAFSKA 411 (670)
Q Consensus 406 i~~lR~ 411 (670)
|..+|+
T Consensus 134 i~~lR~ 139 (140)
T 3i7m_A 134 IEHMRG 139 (140)
T ss_dssp HHHC--
T ss_pred HHHHHc
Confidence 999886
No 48
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=99.52 E-value=1.7e-14 Score=132.18 Aligned_cols=124 Identities=16% Similarity=0.108 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCC-ceEEEEeCCCCCHHHHhhhhcCCeEEE
Q 005915 254 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVELR 332 (670)
Q Consensus 254 ~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~-~~~Lfvd~~~~~~~~~~~l~~~~v~i~ 332 (670)
+|++++|+.|+++|+|++||+++.|++|||||+++. ..+| .+++|+.+ +++||+|. ++..++++.. +.++.
T Consensus 3 ~Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~-~er~---~~l~v~~~g~~~l~~~~-~y~~~a~~~~---~~~v~ 74 (132)
T 3ooo_A 3 SKLNRIRHHLHSVQAELAVFSDPVTVNYLTGFFCDP-HERQ---MFLFVYEDRDPILFVPA-LEVSRAKQSV---PFPVF 74 (132)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCHHHHHHHHSCCCCC-TTSC---CEEEEESSSCCEEEEEG-GGHHHHHHHC---SSCEE
T ss_pred hHHHHHHHHHHHCCCCEEEEcCcchHHHHhCCCCCC-Ccce---EEEEEeCCCCEEEEEec-cchHHHHhcC---CCcEE
Confidence 699999999999999999999999999999999864 2223 36777755 79999994 5555666554 34555
Q ss_pred ecc---cHHHHHHHHHhc--CCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCccc
Q 005915 333 PYN---SILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIA 407 (670)
Q Consensus 333 ~y~---~~~~~l~~l~~~--~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~ 407 (670)
.|. +..+.+.+.... .++||+|.+.+++..++.|++.+ + +++++++++|.
T Consensus 75 ~~~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~------------------------~-~~~~~~~~~v~ 129 (132)
T 3ooo_A 75 GYIDSENPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQTVF------------------------D-GHFENLTPYIQ 129 (132)
T ss_dssp EECTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHHHC------------------------C-SEEEECCHHHH
T ss_pred EEeCCCCHHHHHHHHHhhccCCeEEEecCCcCHHHHHHHHHhC------------------------C-cceechHHHHH
Confidence 553 445566665432 46999999999999999998863 4 77899999988
Q ss_pred ccc
Q 005915 408 FSK 410 (670)
Q Consensus 408 ~lR 410 (670)
.+|
T Consensus 130 ~lR 132 (132)
T 3ooo_A 130 NMR 132 (132)
T ss_dssp TTC
T ss_pred hcC
Confidence 877
No 49
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=99.51 E-value=2.2e-13 Score=150.51 Aligned_cols=178 Identities=8% Similarity=0.011 Sum_probs=136.4
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCcCHHHHHHHHHHHHHhhCC--------CCCCCCc
Q 005915 406 IAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEI---HNGAKLTEVDVADKLLEFRSKQSG--------FLDTSFD 474 (670)
Q Consensus 406 i~~lR~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i---~~~~G~TE~eia~~~~~~~~~~~G--------~~~~~f~ 474 (670)
+-.=+-+-+++-++.+|.|++|+..+++.+..++.... ..+||++-.||+...+.++.+..+ ..|.+||
T Consensus 34 ~lkekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFP 113 (614)
T 4b6a_t 34 LLKDKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIP 113 (614)
T ss_dssp --CCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEE
T ss_pred hhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccC
Confidence 33446678899999999999999999988876652110 016788999999887765443211 2357888
Q ss_pred eeEeeCCCCccccccCCCCC-------------------CcccCCCCeEEEecceeECCeecceEEEEEcCCC-------
Q 005915 475 TISGSGANGAIIHYKPEPGK-------------------CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEP------- 528 (670)
Q Consensus 475 ~iv~sG~~~a~~h~~p~~~~-------------------~~~i~~Gd~v~iD~g~~~~gY~sD~tRT~~vG~p------- 528 (670)
+-++ .|....||.|...+ +..|+.||+|.||+|++.+||.+|+++|++||..
T Consensus 114 T~IS--vN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvvg~~~~~~~~~ 191 (614)
T 4b6a_t 114 TTID--IDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKPIL 191 (614)
T ss_dssp EEEE--ETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCCCTTTSTTT
T ss_pred ceec--HHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCeEEEEEEEEEECCcccccccc
Confidence 6554 67888999996532 2479999999999999999999999999999842
Q ss_pred ------CHHHHHHHHHHHHHHHHHHHhh----------------CCCCCChhHHHHHHHHHHHHcCCC-CccCccccccc
Q 005915 529 ------TAREKECFTRVLQGHIALDQAI----------------FPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGA 585 (670)
Q Consensus 529 ------~~e~~~~~~~v~~a~~a~~~~~----------------~P~G~~~~ev~~~a~~~l~~~G~~-~~h~~GHgiG~ 585 (670)
+....++..++..|.+++++.+ +| |++..+|-.++.++.+.+|+. ....+||+|+.
T Consensus 192 ~~~~pvtGrkADli~AA~~A~EaalrLl~~~~~~e~l~a~l~~~~~-gvt~~~It~~IekvaksY~ck~Vegl~sH~i~r 270 (614)
T 4b6a_t 192 QPTGPLLGGKADAVAAAHIAMETVVALLACALTPEKLPASLGGTSS-GITGQLIRTIVDTIARSYNCGVVPGSRVRRIRR 270 (614)
T ss_dssp TTTSCBCHHHHHHHHHHHHHHHHHHHHC----------------ST-TCBHHHHHHHHHHHHHTTTCEECTTCEEEEEBT
T ss_pred cccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhccCC-CcchHHHHHHHHHHHhcCCcEEecccccccccc
Confidence 3445567777777777777665 88 999999999999999999985 56678999996
Q ss_pred C
Q 005915 586 A 586 (670)
Q Consensus 586 ~ 586 (670)
|
T Consensus 271 ~ 271 (614)
T 4b6a_t 271 F 271 (614)
T ss_dssp T
T ss_pred e
Confidence 6
No 50
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=99.50 E-value=1.6e-14 Score=132.51 Aligned_cols=124 Identities=15% Similarity=0.142 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCcccccccccccccCCCCCceeeEEEEEeCC-ceEEEEeCCCCCHHHHhhhhcCCeEEE
Q 005915 254 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVELR 332 (670)
Q Consensus 254 ~Rl~rlr~~M~e~glDallis~~~ni~YLtGf~g~~~~~~P~~~~~llvt~~-~~~Lfvd~~~~~~~~~~~l~~~~v~i~ 332 (670)
+|++++|+.|+++|+|++||+++.|++|||||+++.. .+| ++++|+.+ +++||+|. ++..+++... +.++.
T Consensus 3 ~Rl~~l~~~m~~~glDa~li~~~~ni~YltGf~~~~~-er~---~~l~v~~~g~~~l~~~~-~y~~~a~~~~---~~~i~ 74 (132)
T 3o5v_A 3 AKLDQIRLYLDQKGAELAIFSDPVTINYLTGFFCDPH-ERQ---LFLFVYHDLAPVLFVPA-LEVARASQAI---SFPVF 74 (132)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCHHHHHHHHSCCCCCT-TSC---CEEEEESSSCCEEEEEG-GGHHHHHHHC---CSCEE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCcchhhHhhCCCCCCc-cce---EEEEEeCCCCEEEEeeh-hhhHHHHhcC---CCcEE
Confidence 6999999999999999999999999999999998642 222 46788765 79999994 5655666554 34555
Q ss_pred ecc---cHHHHHHHHHhc--CCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCCcceecCCccc
Q 005915 333 PYN---SILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIA 407 (670)
Q Consensus 333 ~y~---~~~~~l~~l~~~--~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~ 407 (670)
.|. +..+.+.+.... .++||+|.+.+++..++.|++.+ + +++++++++|.
T Consensus 75 ~~~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~------------------------~-~~~~~~~~~v~ 129 (132)
T 3o5v_A 75 GYVDSENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQTIF------------------------S-GQFNNLTPYVQ 129 (132)
T ss_dssp EECTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHTTC------------------------C-SEEEECHHHHH
T ss_pred EEECCCCHHHHHHHHHhhccCCeEEEecCCCCHHHHHHHHHhC------------------------C-CceeccHHHHH
Confidence 553 344556555432 46999999999999999998642 5 77899998888
Q ss_pred ccc
Q 005915 408 FSK 410 (670)
Q Consensus 408 ~lR 410 (670)
.+|
T Consensus 130 ~lR 132 (132)
T 3o5v_A 130 GMR 132 (132)
T ss_dssp TC-
T ss_pred HhC
Confidence 876
No 51
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=99.45 E-value=3.3e-12 Score=137.96 Aligned_cols=128 Identities=9% Similarity=0.035 Sum_probs=103.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCc----eEEEEeCC-CcEEEEccccHHHH
Q 005915 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSA----GTAVVTKD-KAALWTDGRYFLQA 154 (670)
Q Consensus 80 ~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~----g~lvv~~~-~~~L~td~ry~~qa 154 (670)
...+|+++||+.|++ +++|++||+++ .|++|||||+++. ++++|+.+ +++|+||.+|..++
T Consensus 14 e~~~R~~~l~~~m~~--~g~da~li~~~------------~ni~YltG~~~~~~~r~~~l~v~~~g~~~l~~~~~~~~~~ 79 (378)
T 4ege_A 14 VYARRLAAAAAATEQ--AGLAGLVITPG------------YDLRYLIGSRADTFERLTALVLPASGVPTIVLPRLELASL 79 (378)
T ss_dssp HHHHHHHHHHHHHHH--TTCSEEEECSS------------HHHHHHHCCCCCCSSSCCEEEEESSSCCEEEEEGGGGGGG
T ss_pred HHHHHHHHHHHHHHH--cCCCEEEECCc------------chhHHhhCCCCCCCcceEEEEEEeCCcEEEEEChhhHHHH
Confidence 356899999999999 99999999998 6999999999875 67777764 79999999999999
Q ss_pred Hhhc-c-CceEEEEcCCCCCCCHHHHHHhhcCCC-CeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhh
Q 005915 155 EKQL-S-SSWILMRSGNHGVPTTFEWLNDVLAPG-GRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWK 229 (670)
Q Consensus 155 ~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~ 229 (670)
+++. + ..+++.... +.+++++.+.+.+... ++||+| +.+++..+++|++.+ + .++++. +++|+.++.
T Consensus 80 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~igve-~~~~~~~~~~l~~~~-~--~~~~~~--~~~i~~~R~ 149 (378)
T 4ege_A 80 KESAASDLGVCVRDWV--DGDDPYQLVAVALGGAPAATAVT-DSMPALHLLPLADAL-G--VLPVLA--TDVLRQLRM 149 (378)
T ss_dssp GTSSTTTTTCEEEEEC--TTSCHHHHHHHHTTSSSCCEEEC-TTCCHHHHHHHHHHH-T--SCCEES--HHHHHHHHT
T ss_pred HhcccCCCCeEEEEec--CCCCHHHHHHHHHhcCCCEEEEc-CCCcHHHHHHHHHHc-C--CeEEEc--HHHHHHHHH
Confidence 8873 2 234554432 2356778888777654 689999 679999999999998 4 589998 999998873
No 52
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=99.42 E-value=2.2e-14 Score=164.37 Aligned_cols=157 Identities=11% Similarity=0.101 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHcC-----CCEEEEcC------------cccccccccccccCCCCCceeeEEEEEeCCceEEEEeCCC
Q 005915 253 ASKLSSLRSDLVDAG-----SSAIVISM------------LDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSK 315 (670)
Q Consensus 253 ~~Rl~rlr~~M~e~g-----lDallis~------------~~ni~YLtGf~g~~~~~~P~~~~~llvt~~~~~Lfvd~~~ 315 (670)
.+|+++||+.|+++| +||+||++ ..|++|||||+|+. |++||+.+++.|||| +|
T Consensus 7 ~~Rl~~LR~~m~~~~~~~~~lda~lv~~~D~h~sey~~~~~~~~~ylsGFtGSa--------G~~vVt~~~a~l~tD-gR 77 (623)
T 3ctz_A 7 SELLRQLRQAMRNSEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA--------GTAIITEEHAAMWTD-GR 77 (623)
T ss_dssp HHHHHHHHHHTTCTTTCSSCCSEEEECSCCTTCCSSCCGGGCHHHHHHSCCSSC--------CEEEEESSCEEEEEC-GG
T ss_pred HHHHHHHHHHHHhcCCCCCceeEEEECCCCccccccccchhccceeccCcCCCc--------eEEEEecCeeEEEEC-cH
Confidence 679999999999999 99999999 88999999999986 899999999999999 78
Q ss_pred CCHHHHhhhhcCCeEEEec-----ccHHHHHHHHHhcCCEEEEeCCCchHHHHHHHHHHHHHhhhcccccccccccccCC
Q 005915 316 VTPDVMDHLKNAGVELRPY-----NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDT 390 (670)
Q Consensus 316 ~~~~~~~~l~~~~v~i~~y-----~~~~~~l~~l~~~~~rIgve~~~~s~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 390 (670)
|..++.+++. .++++... ..+.+.|++....+++||+|+..+++..++.|++.+..
T Consensus 78 Y~~QA~~ql~-~~~~l~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~l~~~l~~------------------ 138 (623)
T 3ctz_A 78 YFLQAAKQMD-SNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRS------------------ 138 (623)
T ss_dssp GHHHHHHHBC-TTEEEEETTSTTCCCHHHHHHHHCCTTCEEEECGGGSBHHHHHHHHHHHHH------------------
T ss_pred HHHHHHHhcC-CceEEEEecCCCCccHHHHHHHhCcCCCEEEECcccccHHHHHHHHHHHHh------------------
Confidence 8889988885 24665443 24667787765568999999999999999999987632
Q ss_pred CCCCCCCcceec-CCccccc---cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005915 391 TGQSGGPAGVFR-TSPIAFS---KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEI 443 (670)
Q Consensus 391 ~~~~~~~~~vd~-~~~i~~l---R~vKs~~EIe~~R~A~~i~~~a~~~~~~~l~~~i 443 (670)
.+.++++. .++|+.+ |.+|+++| .++.+..+++..+..-++.++..+
T Consensus 139 ----~~~~lv~~~~~lvd~iw~~Rp~k~~~e--~~~~~~~~ag~~~~~rl~~lr~~m 189 (623)
T 3ctz_A 139 ----AGHHLIPVKENLVDKIWTDRPERPCKP--LLTLGLDYTGISWKDKVADLRLKM 189 (623)
T ss_dssp ----TTCEEEECSSCHHHHHCTTCCCCCCCC--CEECCHHHHSSCHHHHHHHHHHHH
T ss_pred ----cCCEEEecCCCcHHHHhhcCCCCCchh--hhhcchhhcChhHHHHHHHHHHHH
Confidence 24578888 5999999 99999999 888899999888877666664443
No 53
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=99.36 E-value=1.8e-12 Score=141.24 Aligned_cols=129 Identities=16% Similarity=0.111 Sum_probs=106.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCc----eEEEEeCCCcEEEEccccHHHHH
Q 005915 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSA----GTAVVTKDKAALWTDGRYFLQAE 155 (670)
Q Consensus 80 ~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~----g~lvv~~~~~~L~td~ry~~qa~ 155 (670)
.+.+|+++||+.|++ +++|++||+++ .|++|||||+++. +++||+.++++||||+||..|+.
T Consensus 23 e~~~Rl~~Lr~~m~~--~~lDa~li~~~------------~ni~yltgf~~s~~~~p~~llV~~~~~~l~~~~~~~~~a~ 88 (402)
T 1kp0_A 23 EMTRRZBRLRAWMAK--SBIDAVLFTSY------------HNINYYSGWLYCYFGRKYAZVIBZVKAVTISKGIDGGMPW 88 (402)
T ss_dssp HHHHHHHHHHHHHHH--HTCSEEEECSH------------HHHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTTHHH
T ss_pred HHHHHHHHHHHHHHH--CCCCEEEEcCC------------CCceEecCCCCCCCCceEEEEEeCCCCEEEeccchhhhhH
Confidence 356899999999999 99999999987 5999999999863 68889998999999999999987
Q ss_pred hhccCceEEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhh
Q 005915 156 KQLSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw 228 (670)
++... ..+..... ..+...++|.+.+...++||+|++.+++..++.|++.+++ .++++. .++|+.++
T Consensus 89 ~~~~~-~~v~~~~~-~~~~~~~~l~~~l~~~~~igvd~~~~~~~~~~~l~~~l~~--~~~v~~--~~~i~~lR 155 (402)
T 1kp0_A 89 RRSFG-BNIVYTDW-KRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZKALPG--TEFVDV--GZPVMWZR 155 (402)
T ss_dssp HHCSS-EEEEECSS-STTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHHHSTT--CEEEEC--HHHHHHHH
T ss_pred HhccC-cceEeccc-cccCHHHHHHHHhccCCEEEEecCCCCHHHHHHHHHhCCC--CEEEEC--HHHHHHHH
Confidence 77643 22322111 1245678888877767899999999999999999998764 689998 89999986
No 54
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=99.32 E-value=8.8e-11 Score=126.72 Aligned_cols=129 Identities=9% Similarity=0.192 Sum_probs=96.2
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCce-----EEEEeCCCcEEEEccccHH
Q 005915 78 QDAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG-----TAVVTKDKAALWTDGRYFL 152 (670)
Q Consensus 78 ~~~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g-----~lvv~~~~~~L~td~ry~~ 152 (670)
.|...+|+++||+.|++ +++|++||+++ .|++|||||++... +++++.+...+++..++..
T Consensus 12 ~~Ey~~Rl~rlr~~m~~--~glDalli~~~------------~ni~YLTG~~~~~~~~~~~~lvv~~~g~~~~~~~~~~~ 77 (377)
T 4fkc_A 12 SMDYKRRIHKFQAHFGK--KGFEGALVAPG------------SNFYYLTGFNPLGTLERLFVLILPSEGLLTAIAPRLYE 77 (377)
T ss_dssp SSCHHHHHHHHHHHHHH--TTCCEEEECSS------------HHHHHHHSCCCCCCSSSCCEEEEESSSCCEEEEEGGGH
T ss_pred hHHHHHHHHHHHHHHHH--CCCCEEEECCC------------hhheeecCCCCCCCCcceEEEEEcCCCcEEEEeccchH
Confidence 68999999999999999 99999999998 69999999987642 5667665544445555555
Q ss_pred HHHhhccCceEEEEcCCCCCCCHH----HHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhh
Q 005915 153 QAEKQLSSSWILMRSGNHGVPTTF----EWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 153 qa~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw 228 (670)
++.++.......... .+.+. +.|.+....+++||+|. .+++..+.+|++.+++ .+++++ +++|+.++
T Consensus 78 ~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~i~~d~-~~~~~~~~~l~~~~~~--~~~~d~--~~~i~~lR 148 (377)
T 4fkc_A 78 KELEEFNGEVVLWSD----SENPYKIFATKIKETFKEGEKLLIDD-TMPVGVFLKAKDIFDK--YSLHPI--SPVISELR 148 (377)
T ss_dssp HHHTTCSSEEEEECT----TSCHHHHHHHHHHHHSCSSCEEEECT-TSCHHHHHHTHHHHTT--SEEEES--HHHHHHHH
T ss_pred HHHHhcCCCEEEecc----ccCHHHHHHHHHHHhhhccceeeeec-cccHHHHHHHHhhCCC--CeEEEh--HHHHHHHH
Confidence 555555433222222 23444 44455555678999994 5899999999999976 699998 99999887
Q ss_pred h
Q 005915 229 K 229 (670)
Q Consensus 229 ~ 229 (670)
.
T Consensus 149 ~ 149 (377)
T 4fkc_A 149 E 149 (377)
T ss_dssp T
T ss_pred h
Confidence 3
No 55
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=99.24 E-value=2.6e-10 Score=121.83 Aligned_cols=120 Identities=20% Similarity=0.222 Sum_probs=95.6
Q ss_pred HHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCCce-E-EEEeCCCcEEEEccccHHHHHhhcc
Q 005915 82 DEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG-T-AVVTKDKAALWTDGRYFLQAEKQLS 159 (670)
Q Consensus 82 ~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs~g-~-lvv~~~~~~L~td~ry~~qa~~~~~ 159 (670)
.+|+++||+.|++ +++|+++|+++ .|++|||||+++.+ + ++++.++..|++|.++ ++++ +..
T Consensus 5 ~~R~~~l~~~m~~--~~~da~li~~~------------~n~~yltg~~~~~~~~~llv~~~~~~l~~~~~~-~~~~-~~~ 68 (351)
T 1wy2_A 5 NEKVKKIIEFMDK--NSIDAVLIAKN------------PNVYYISGASPLAGGYILITGESATLYVPELEY-EMAK-EES 68 (351)
T ss_dssp CHHHHHHHHHHHH--TTCSEEEECSH------------HHHHHHHSCCCSSCCEEEEETTEEEEEEEHHHH-HHHH-HHC
T ss_pred HHHHHHHHHHHHH--CCCCEEEECCC------------CCceEecCCCCCCCcEEEEEECCCcEEEECchH-HHHh-hcC
Confidence 4799999999999 99999999988 59999999998765 6 7888888899999999 8883 432
Q ss_pred CceEEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhh
Q 005915 160 SSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWK 229 (670)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~ 229 (670)
.+++.... . ++.+.+.+.+.++||+| +.+++..++.|++.++. .++++. +++|+.++.
T Consensus 69 -~~~v~~~~-----~-~~~l~~~l~~~~~ig~e-~~~~~~~~~~l~~~~~~--~~~~~~--~~~i~~~r~ 126 (351)
T 1wy2_A 69 -NIPVEKFK-----K-MDEFYKALEGIKSLGIE-SSLPYGFIEELKKKANI--KEFKKV--DDVIRDMRI 126 (351)
T ss_dssp -SSCEEEES-----S-HHHHHHHHTTCSEEEEC-TTCBHHHHHHHHHHSCC--CEEEEC--HHHHHHHHT
T ss_pred -CCeEEEeC-----c-HHHHHHHHccCCEEEEc-CcCCHHHHHHHHhhCCC--CeEEEc--HHHHHHHHh
Confidence 23443321 1 34555555555799999 89999999999988753 489998 899998863
No 56
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=99.00 E-value=1.9e-08 Score=110.69 Aligned_cols=145 Identities=10% Similarity=0.098 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhcC------CCCCccEEEEcCCCCCCc-cccccccc-cceEecCCcCCceEEEEeCCCcEEEEccc---
Q 005915 81 PDEKLRALRELFSR------PGVNIDAYIIPSQDAHQS-EFIAECYM-RRAYISGFTGSAGTAVVTKDKAALWTDGR--- 149 (670)
Q Consensus 81 ~~~Rl~~lr~~m~~------~~~~lDa~lI~~~d~h~s-e~~~~~~~-ni~YlTGF~gs~g~lvv~~~~~~L~td~r--- 149 (670)
..+|+++||+.|++ ..+++|++||++++++.. +|- .+. +++|||||+++.+++|++.++++||||.+
T Consensus 13 ~~~Rl~~L~~~m~~~~~~~~~~~g~Dalli~~~~~d~~~~y~--q~~~~~~yLtG~~~~~~~lvi~~~~~~l~~~~~~~~ 90 (444)
T 3cb6_A 13 FHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQ--KSTALHTWLLGYEFPSTLILLEKHRITILTSVNKAN 90 (444)
T ss_dssp HHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTTCCCC--HHHHHHHHHHSSCCSSEEEEEETTEEEEEEEHHHHT
T ss_pred HHHHHHHHHHHhhhcCcccccccCCCEEEEEeCCCCCCCCcc--cchhhhHHHhCCCCCCEEEEEeCCcEEEEEcCchHH
Confidence 45799999999983 015899999998864211 111 111 18999999999999999998999999997
Q ss_pred cHHHHH-hhccC-ceEEEEc-CCCCCC-CHHHHHHhhcC-CCCeEEEcC-CcccHHHHHHHHHHHhc--CCcEEEEcccc
Q 005915 150 YFLQAE-KQLSS-SWILMRS-GNHGVP-TTFEWLNDVLA-PGGRVGIDP-FLFSSDAAEELKEAIAK--KNHELVYLYDL 221 (670)
Q Consensus 150 y~~qa~-~~~~~-~~~~~~~-~~~~~~-~~~~~l~~~~~-~~~~vg~e~-~~~s~~~~~~L~~~l~~--~~~~lv~~~~~ 221 (670)
|.++++ .+... .+++... .....+ ...+.+.+.+. .+++||+++ +.++...+..+.+.+.. .+.+++++ +
T Consensus 91 y~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~ig~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~ 168 (444)
T 3cb6_A 91 MLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDA--S 168 (444)
T ss_dssp TTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTTTGGGSEEEEC--H
T ss_pred HHhhhhccccCCccEEEEecccccccCHHHHHHHHHHHHhcCCEEEEeccccchhHHHHHHHHHHhhccCCceEeec--H
Confidence 677887 55432 2444432 110000 12344444442 257899987 77888888888887742 23589998 9
Q ss_pred hhHHHhhh
Q 005915 222 NLVDVIWK 229 (670)
Q Consensus 222 ~lv~~lw~ 229 (670)
++|..++.
T Consensus 169 ~~i~~~r~ 176 (444)
T 3cb6_A 169 LGLAKCLA 176 (444)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 99999874
No 57
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=98.91 E-value=3.5e-09 Score=115.19 Aligned_cols=131 Identities=19% Similarity=0.131 Sum_probs=101.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCC----ceEEEEeCCCcEEEEccccHHHHH
Q 005915 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGS----AGTAVVTKDKAALWTDGRYFLQAE 155 (670)
Q Consensus 80 ~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs----~g~lvv~~~~~~L~td~ry~~qa~ 155 (670)
.+.+|+++||+.|++ +++|++||+++ .|++|||||..+ ..+++|+.++++|++|++|..++.
T Consensus 22 e~~~R~~~l~~~m~~--~~~da~li~~~------------~ni~yltg~~~~~~~~~~~llv~~~~~~l~~~~~~~~~~~ 87 (401)
T 1chm_A 22 EYANRQARLRAHLAA--ENIDAAIFTSY------------HNINYYSDFLYCSFGRPYALVVTEDDVISISANIDGGQPW 87 (401)
T ss_dssp HHHHHHHHHHHHHHH--TTCSEEEECSH------------HHHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTTHHH
T ss_pred HHHHHHHHHHHHHHH--CCCCEEEEeCc------------ccceeeCCCCcCCCCCeEEEEEecCCCEEEecccchhhHH
Confidence 456899999999999 99999999987 599999999753 235678888899999999988865
Q ss_pred hhccCceEEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhh
Q 005915 156 KQLSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWK 229 (670)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~ 229 (670)
++......+.... ...+.+.+.|.+.+...++||+|.+.+++..++.|++.++. .+++++ .++|..++.
T Consensus 88 ~~~~~~~~v~~~~-~~~~~~~~~l~~~l~~~~~i~ve~~~~~~~~~~~l~~~~~~--~~~~~~--~~~i~~~R~ 156 (401)
T 1chm_A 88 RRTVGTDNIVYTD-WQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARYPD--AELVDV--AAACMRMRM 156 (401)
T ss_dssp HHCCSSEEEEECT-TSTTHHHHHHHHHCSCCSEEEECTTTCBHHHHHHHHHHCTT--CEEEEC--HHHHHHHHT
T ss_pred Hhhcccceeeecc-ccccCHHHHHHHHhccCCeEEEecCCCCHHHHHHHHhhCCC--CEEEEh--HHHHHHHHh
Confidence 4432211222211 11245678888877656899999999999999999998765 589998 899998863
No 58
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=98.87 E-value=1.4e-09 Score=116.38 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=90.8
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcCC-----ceEEEEeCCC-cEEEEccccHHHHHh
Q 005915 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGS-----AGTAVVTKDK-AALWTDGRYFLQAEK 156 (670)
Q Consensus 83 ~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~gs-----~g~lvv~~~~-~~L~td~ry~~qa~~ 156 (670)
+|+++||+.|++ +++|+++|+++ .|++|||||.+. .++++++.++ ++||+|.+|..+++.
T Consensus 1 ~R~~~l~~~m~~--~~~d~~li~~~------------~n~~yltG~~~~~~~~~~~~l~i~~~~~~~l~~~~~~~~~~~~ 66 (356)
T 1wn1_A 1 MRLEKFIHLLGE--RGFDGALISPG------------TNLYYLTGLRLHEVGERLAILAVSAEGDYRFLAPSLYENVVNN 66 (356)
T ss_dssp CHHHHHHHHHHH--TTCSEEEECSS------------HHHHHHHCCCCSCCTTSCCEEEEETTSCEEEEEEGGGTTTTTT
T ss_pred CHHHHHHHHHHH--CCCcEEEECCC------------ccceeecCCcCCCCCCceEEEEEeCCCcEEEEECcccHHHhhC
Confidence 389999999999 99999999998 599999999754 4678888765 999999999877654
Q ss_pred hccCceEEEEcCCCCCCCHHHHHHhhcC----CCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHHhh
Q 005915 157 QLSSSWILMRSGNHGVPTTFEWLNDVLA----PGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (670)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw 228 (670)
+++.... +.....+.|.+.+. ..++||+| +.+++..++.|++. + +.+++++ +++|+.++
T Consensus 67 -----~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~i~~~-~~~~~~~~~~l~~~-~--~~~~~~~--~~~i~~~R 129 (356)
T 1wn1_A 67 -----FPATFWH--DGENPYAKLREILEELGISKGRILIE-DTMRADWLIGIMKL-G--KFTFQPL--SSLIKELR 129 (356)
T ss_dssp -----SCEEEEC--TTSCHHHHHHHHHHHTTCSSEEEEEC-TTSBHHHHHHHGGG-S--CEEEEET--HHHHHHHH
T ss_pred -----CeEEEEc--CCCCHHHHHHHHHHHhcCCCCEEEEe-CCcCHHHHHHHHcC-C--CCeEEEc--HHHHHHHH
Confidence 2233221 12344555554432 45789999 88999999999775 3 3589998 89999886
No 59
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=98.85 E-value=2.4e-09 Score=118.39 Aligned_cols=126 Identities=11% Similarity=0.027 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHhcCCCCCccEEEEcCCCCCCccccccccccceEecCCcC--------CceEEEEeCCCcEEEEccccHH
Q 005915 81 PDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTG--------SAGTAVVTKDKAALWTDGRYFL 152 (670)
Q Consensus 81 ~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~se~~~~~~~ni~YlTGF~g--------s~g~lvv~~~~~~L~td~ry~~ 152 (670)
..+|+++||+.|++ +++||+||+++ .|++|||||+| +.+++||+.++..+|+|.||..
T Consensus 79 ~~~Rl~rlr~~m~~--~glDalli~~~------------~ni~YlTGf~g~~~~~~~~~~~~llV~~dg~~~l~d~r~~~ 144 (470)
T 4b28_A 79 RRFRHRRLTDHVVA--RGYAGLLMFDP------------LNIRYATDSTNMQLWNTHNPFRATLLCADGYMVMWDYKNSP 144 (470)
T ss_dssp HHHHHHHHHHHHHH--TTCSEEEECSH------------HHHHHHHCCCSSHHHHHHSCCCEEEEETTSCEEEECCTTCG
T ss_pred HHHHHHHHHHHHHH--cCCCEEEEcCC------------CcceeecCCCCCcccccCCCCEEEEEECCCCEEEEecchhh
Confidence 35799999999999 99999999998 69999999997 3578999988888999999854
Q ss_pred HHHhhccCceEEEEcCCC------C----------CCCHHHHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEE
Q 005915 153 QAEKQLSSSWILMRSGNH------G----------VPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELV 216 (670)
Q Consensus 153 qa~~~~~~~~~~~~~~~~------~----------~~~~~~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv 216 (670)
......+.--++.. ... . ...+.++|.+.....++||||.. ++..++.|++. +++++
T Consensus 145 ~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~igve~~--~~~~~~~L~~~----~~~~v 217 (470)
T 4b28_A 145 FLSEFNPLVREQRA-GADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAVDKV--MLHGLRALQAQ----GFEIM 217 (470)
T ss_dssp GGGTTCTTSCEEEC-CCCCSHHHHGGGHHHHHHHHHHHHHHHHHHHSTTCCEEEESSC--CHHHHHHHHHT----TCEEE
T ss_pred hhhhhhhHHHHHHh-cCCeeeeccCccccccchhHHHHHHHHHHHhCccCceeeeCcc--hHHHHHHHHcC----CCEEE
Confidence 33211110001111 100 0 00123344444334689999985 67788888762 47999
Q ss_pred EcccchhHHHhhh
Q 005915 217 YLYDLNLVDVIWK 229 (670)
Q Consensus 217 ~~~~~~lv~~lw~ 229 (670)
+. +++|+.++.
T Consensus 218 d~--~~~v~~lR~ 228 (470)
T 4b28_A 218 DG--EEVTEKARS 228 (470)
T ss_dssp EH--HHHHHHHHT
T ss_pred Ec--HHHHHHHHh
Confidence 98 999999873
No 60
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=98.49 E-value=1.2e-05 Score=88.39 Aligned_cols=138 Identities=16% Similarity=0.141 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHhcCCCCCccEEEEcCCCCCC---ccccccccccceEecCCcCCceEEEEeC-----CCcEEEEccccHH
Q 005915 81 PDEKLRALRELFSRPGVNIDAYIIPSQDAHQ---SEFIAECYMRRAYISGFTGSAGTAVVTK-----DKAALWTDGRYFL 152 (670)
Q Consensus 81 ~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~---se~~~~~~~ni~YlTGF~gs~g~lvv~~-----~~~~L~td~ry~~ 152 (670)
..+|+++|++.|++ ++ +++|+++++... .+|.=.++.|++|||||....+++|++. ++++||+|.++..
T Consensus 8 ~~~R~~~l~~~m~~--~~-~~ll~~~~~~~r~~D~~y~frq~~n~~YltG~~~~~~~lvi~~~~~~~~~~~Lf~~~~~~~ 84 (440)
T 2v3z_A 8 FQRRRQALVEQMQP--GS-AALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLT 84 (440)
T ss_dssp HHHHHHHHHHHSCS--SE-EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCCSSCEEEEEECSSSCEEEEEEECCCCHH
T ss_pred HHHHHHHHHHhccc--CC-EEEEECCCccccCCCCCCcccCCCCEEEecCCCCCCEEEEEEecCCCCceEEEEecCCCcc
Confidence 46799999999999 77 788888752110 2232234579999999998888888764 4689999987654
Q ss_pred HH------------HhhccCceEEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCc------ccHHHHHHHHHHHhc---C
Q 005915 153 QA------------EKQLSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFL------FSSDAAEELKEAIAK---K 211 (670)
Q Consensus 153 qa------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vg~e~~~------~s~~~~~~L~~~l~~---~ 211 (670)
+. ++..... .+.. .+.+.+.|.+.+...++|+++... ++...+..|.+.+.. .
T Consensus 85 ~~~w~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 158 (440)
T 2v3z_A 85 AEIWFGRRLGQDAAPEKLGVD-RALA-----FSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTA 158 (440)
T ss_dssp HHHHHCCCCHHHHHHHHHTCS-EEEE-----GGGHHHHHHHHHTTCSEEECCTTSCHHHHHHHHHHHHHHHTCGGGTCCC
T ss_pred cceecCCCCCHHHHHHhcCCC-EEee-----HHHHHHHHHHHHcCCCEEEEeCCcccchhHHHHHHHHHHhhhcccccCC
Confidence 32 2222111 1222 235667777766556799998763 233455555544321 1
Q ss_pred CcEEEEcccchhHHHhhh
Q 005915 212 NHELVYLYDLNLVDVIWK 229 (670)
Q Consensus 212 ~~~lv~~~~~~lv~~lw~ 229 (670)
+.+++++ .++|..++.
T Consensus 159 ~~~~~~~--~~~i~~~R~ 174 (440)
T 2v3z_A 159 PATMIDW--RPVVHEMRL 174 (440)
T ss_dssp CSEEECC--HHHHHHHHH
T ss_pred cceeeeH--HHHHHHHHh
Confidence 3578998 888988863
No 61
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=98.42 E-value=1.2e-05 Score=87.79 Aligned_cols=135 Identities=9% Similarity=0.035 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHhcCCCCCccEEEEcCCCCC----CccccccccccceEecCCcCCceEEEEeCC----CcEEEEc-----
Q 005915 81 PDEKLRALRELFSRPGVNIDAYIIPSQDAH----QSEFIAECYMRRAYISGFTGSAGTAVVTKD----KAALWTD----- 147 (670)
Q Consensus 81 ~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h----~se~~~~~~~ni~YlTGF~gs~g~lvv~~~----~~~L~td----- 147 (670)
..+|.++|.+.|.+ +++ +|+.+.++. -.+|.=.++.|.+|||||+...+++|+..+ +.+||++
T Consensus 6 ~~~RR~~l~~~l~~--~~~--~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~~~~v~~~~~~~~~~~lfv~~~~~~ 81 (427)
T 3ig4_A 6 FAQNRERLVNTLPD--ESI--TILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPNVIFMLKKFGNSVEETLFIEKSDPV 81 (427)
T ss_dssp HHHHHHHHHTTSCS--SEE--EEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTTCEEEEEEETTEEEEEEEECCCCTT
T ss_pred HHHHHHHHHHhCcC--CCE--EEEECCCccccCCCCCCcccCCCCeEEeeCCCCCCEEEEEEccCCCceEEEEecCCCcc
Confidence 45788899988887 543 344433211 134555566899999999999988887542 4556653
Q ss_pred ------cccHHHHHhhccCceE-EEEcCCCCCCCHHHHHHhhcCC--CCeEEEcCC--------cccHHHHHHHHHHHhc
Q 005915 148 ------GRYFLQAEKQLSSSWI-LMRSGNHGVPTTFEWLNDVLAP--GGRVGIDPF--------LFSSDAAEELKEAIAK 210 (670)
Q Consensus 148 ------~ry~~qa~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~--~~~vg~e~~--------~~s~~~~~~L~~~l~~ 210 (670)
.||..++.++... ++ +... ....+.|.+.+.. .++|+++.. .+++..++.|++.++.
T Consensus 82 ~~~w~g~r~~~~~a~~~~~-~~~v~~~-----~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 155 (427)
T 3ig4_A 82 MEKWVGKTVSNEEAEKISG-IKKVIYL-----DSFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVREQYPH 155 (427)
T ss_dssp GGGTTCCCCCHHHHHHHHC-CSEEEEG-----GGHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHHHCTT
T ss_pred ceEEeCCCCcHHHHHhcCC-CCEEEEh-----hhHHHHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHhhCCC
Confidence 6887776655432 32 3322 3456667766554 578999853 4678899999999876
Q ss_pred CCcEEEEcccchhHHHhhh
Q 005915 211 KNHELVYLYDLNLVDVIWK 229 (670)
Q Consensus 211 ~~~~lv~~~~~~lv~~lw~ 229 (670)
.+++++ .++|+.++.
T Consensus 156 --~~~~~~--~~~i~~lR~ 170 (427)
T 3ig4_A 156 --VTIGNV--YPNICELRV 170 (427)
T ss_dssp --CEEEEC--HHHHHHHHT
T ss_pred --CeEeEh--HHHHHHHHh
Confidence 689998 999999873
No 62
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=94.40 E-value=0.03 Score=61.97 Aligned_cols=70 Identities=10% Similarity=0.016 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHHhcCCCCC----ccEEEEcCCCC-----CCccccccccccceEecCCcCCceEEEEe--CCCcEEEEcc
Q 005915 80 APDEKLRALRELFSRPGVN----IDAYIIPSQDA-----HQSEFIAECYMRRAYISGFTGSAGTAVVT--KDKAALWTDG 148 (670)
Q Consensus 80 ~~~~Rl~~lr~~m~~~~~~----lDa~lI~~~d~-----h~se~~~~~~~ni~YlTGF~gs~g~lvv~--~~~~~L~td~ 148 (670)
...+|+++|++.|++ ++ .|++||++... .-.+|.-.++.|.+|||||....+++|+. .++.+||++.
T Consensus 23 e~~~Rr~~l~~~~~~--~~~~~~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~~~~vi~~~~~~~~L~~~~ 100 (494)
T 2iw2_A 23 LFALNRQRLCERLRK--NPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKSTLFVPR 100 (494)
T ss_dssp HHHHHHHHHHHHHHH--CTTCCTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSSCEEEEETTTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHh--hhcccCceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCCeEEEEEccCCeEEEEECC
Confidence 356899999999997 64 46889876543 23456556778999999999887777774 3689999987
Q ss_pred ccH
Q 005915 149 RYF 151 (670)
Q Consensus 149 ry~ 151 (670)
+..
T Consensus 101 ~~~ 103 (494)
T 2iw2_A 101 LPA 103 (494)
T ss_dssp CCG
T ss_pred CCH
Confidence 654
No 63
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=94.20 E-value=0.097 Score=55.40 Aligned_cols=97 Identities=11% Similarity=0.022 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCC-ccCcccccccCCcc-----ccCCCcccccCCCCc
Q 005915 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY-RHGTGHGVGAALNV-----HEGPQSISFRYGNMT 604 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~-~h~~GHgiG~~l~~-----hE~P~~i~~~~~~~~ 604 (670)
..|++-++..++++.+.+.+|| |++..||++.+.+.+++.|..- ..+.|+.+. +.+ |--|. - ..++.
T Consensus 47 ~~R~Aa~I~~~v~~~~~~~ikp-G~t~~el~~~~e~~i~~~~~~~~~~g~~FP~c--iSvN~~v~Hg~P~-~---~~~~~ 119 (358)
T 3fm3_A 47 DARRAAEAHRRARYRVQSIVRP-GITLLEIVRSIEDSTRTLLKGERNNGIGFPAG--MSMNSCAAHYTVN-P---GEQDI 119 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEE--EEETTEEECCCCC-T---TCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHhcCCCcccCCCCCcE--EeeCCEEEecCCC-C---CCCCe
Confidence 4578888888999999999999 9999999999999998877521 112222222 222 33342 1 11568
Q ss_pred cccCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 605 ~L~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
+|++|.++.|..|.+.+|+.+= +.-|+.|.
T Consensus 120 ~L~~GDiV~ID~G~~~dGY~sD-~arT~~vg 149 (358)
T 3fm3_A 120 VLKEDDVLKIDFGTHSDGRIMD-SAFTVAFK 149 (358)
T ss_dssp BCCTTCEEEEEEEEEETTEEEE-EEEEEECC
T ss_pred EecCCCEEEEEeeEEECCEEEE-EEEecccc
Confidence 9999999999999998876442 34455554
No 64
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=90.49 E-value=0.84 Score=47.64 Aligned_cols=98 Identities=16% Similarity=0.064 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCC--c--cCcccccccCCcccc-CCCcccccCCCCc
Q 005915 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY--R--HGTGHGVGAALNVHE-GPQSISFRYGNMT 604 (670)
Q Consensus 530 ~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~--~--h~~GHgiG~~l~~hE-~P~~i~~~~~~~~ 604 (670)
+..|++-+.+.++++.+.+.++| |++-.||++.+.+.+.+.|... . .+....+. ...++ .|+.+ .++.
T Consensus 70 ~~mR~A~~i~~~a~~~~~~~ikp-G~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~--~g~n~~~~H~~----~~~~ 142 (337)
T 4fuk_A 70 QRIKTVCQLSREVLDIATAAAKP-GITTDELDRIVHEATVERNMYPSPLNYYGFPKSVC--TSVNEVICHGI----PDSR 142 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEECCC----CCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceee--ccccccccCCC----CCCc
Confidence 34577777888999999999999 9999999999999999988621 1 11111111 11111 12111 2678
Q ss_pred cccCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 605 ~L~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
+|++|.++.+..|.+..|. -.-+.-|+.|.
T Consensus 143 ~l~~GD~v~iD~g~~~~GY-~sD~tRT~~vG 172 (337)
T 4fuk_A 143 ELEEGDILNIDVSSYLNGF-HGDLNETVFIG 172 (337)
T ss_dssp BCCTTCEEEEEEEEEETTE-EEEEEEEEESS
T ss_pred cccCCCEEEEecceeECCE-EEeeeeeEEeC
Confidence 9999999999999887654 33355566553
No 65
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=89.09 E-value=1.2 Score=45.58 Aligned_cols=96 Identities=14% Similarity=0.031 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--CccCcccccccCCccccCCCcccccCCCCcccc
Q 005915 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLV 607 (670)
Q Consensus 530 ~e~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~h~~GHgiG~~l~~hE~P~~i~~~~~~~~~L~ 607 (670)
+..|++-..+.+++..+.+.++| |++-.||++.+.+.+.+.|.. |+..+ +++.. -.|-.|. ++++.+|+
T Consensus 4 ~~mr~A~~i~~~~l~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~fp~~v--s~n~~-~~H~~p~-----~~~~~~L~ 74 (295)
T 1xgs_A 4 EKLMKAGEIAKKVREKAIKLARP-GMLLLELAESIEKMIMELGGKPAFPVNL--SINEI-AAHYTPY-----KGDTTVLK 74 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEESSCCEE--EETTE-EECCCCC-----TTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHcCCCCCCCcEE--eeCCc-cccccCC-----CCCCcccc
Confidence 35678888888999999999999 999999999999999998863 33211 12211 1232221 11468999
Q ss_pred CCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 608 EGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 608 ~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
+|.++.+.-|....|+ -.-+.-|+.|.
T Consensus 75 ~GDiv~iD~G~~~~GY-~sD~tRT~~vG 101 (295)
T 1xgs_A 75 EGDYLKIDVGVHIDGF-IADTAVTVRVG 101 (295)
T ss_dssp TTCEEEEEEEEEETTE-EEEEEEEEETT
T ss_pred CCCEEEEEEeEEECCE-EEEEEEEEEeC
Confidence 9999999999876653 34456666664
No 66
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=87.48 E-value=2.1 Score=42.72 Aligned_cols=95 Identities=13% Similarity=-0.015 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--Cc--cCcccccccCCcccc-CCCcccccCCCCccc
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YR--HGTGHGVGAALNVHE-GPQSISFRYGNMTPL 606 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~--h~~GHgiG~~l~~hE-~P~~i~~~~~~~~~L 606 (670)
.|++-+.+.+++.++.+.++| |++-.||.+.+...+.+.|-. +. .+....+. ...+. .|+ . ..++.+|
T Consensus 13 mr~A~~i~~~a~~~~~~~ikp-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~--~g~~~~~~H---~-~~~~~~l 85 (264)
T 3tb5_A 13 MDESGELLADVHRHLRTFIKP-GITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATC--CSINDEICH---G-FPRKKVL 85 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEE--EEETTEEEC---C-CCCSCBC
T ss_pred HHHHHHHHHHHHHHHHHhCcC-CCCHHHHHHHHHHHHHHcCCCcccccccCCCcceE--ECCcccccC---C-CCCCccc
Confidence 455666677889999999999 999999999999999998852 11 11111111 11111 111 1 1257899
Q ss_pred cCCCEEEECceeeecCcceEEEEEEEEE
Q 005915 607 VEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (670)
Q Consensus 607 ~~GMV~siEPgiy~~~~~GvriED~v~V 634 (670)
++|.++.++.|....| +-.-+.-|+.|
T Consensus 86 ~~Gdlv~iD~g~~~~G-Y~sD~tRT~~v 112 (264)
T 3tb5_A 86 KDGDLIKVDMCVDLKG-AISDSCWSYVV 112 (264)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred cCCCEEEEeccceecc-eeeeccccccc
Confidence 9999999999877655 34456667766
No 67
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=87.27 E-value=2.8 Score=43.53 Aligned_cols=96 Identities=16% Similarity=0.076 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--Ccc--CcccccccCCcccc-CCCcccccCCCCcccc
Q 005915 533 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRH--GTGHGVGAALNVHE-GPQSISFRYGNMTPLV 607 (670)
Q Consensus 533 ~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~h--~~GHgiG~~l~~hE-~P~~i~~~~~~~~~L~ 607 (670)
|++...+.++++++.+.++| |++-.||++.+.+.+.+.|.. +.. +..-.+. ...++ -|..+ + ++.+|+
T Consensus 85 R~A~~ia~~al~~~~~~i~p-Gvte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~--sg~n~~~~H~~---p-~~~~L~ 157 (329)
T 2b3h_A 85 RLVCRLAREVLDVAAGMIKP-GVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCC--TSVNEVICHGI---P-DRRPLQ 157 (329)
T ss_dssp HHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEECCC---C-CSCBCC
T ss_pred HHHHHHHHHHHHHHHHHhhC-CCcHHHHHHHHHHHHHHcCCccccccccCCCCeEE--ecCCCCcCCCC---C-CCcCCC
Confidence 44555566778888899999 999999999999999998862 110 1111111 11111 11111 1 467899
Q ss_pred CCCEEEECceeeecCcceEEEEEEEEEec
Q 005915 608 EGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (670)
Q Consensus 608 ~GMV~siEPgiy~~~~~GvriED~v~Vte 636 (670)
+|.++.+.-|.+..| +-.-+.-|+.|.+
T Consensus 158 ~GDiv~iD~G~~~~G-Y~sD~tRT~~vG~ 185 (329)
T 2b3h_A 158 EGDIVNVDITLYRNG-YHGDLNETFFVGE 185 (329)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEECSS
T ss_pred CCCEEEEEeeEEECC-EEEeeEEEEEeCC
Confidence 999999999987754 3455677777743
No 68
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=85.47 E-value=5 Score=39.56 Aligned_cols=96 Identities=16% Similarity=0.028 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCCc--c--CcccccccCCcccc-CCCcccccCCCCccc
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR--H--GTGHGVGAALNVHE-GPQSISFRYGNMTPL 606 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~~--h--~~GHgiG~~l~~hE-~P~~i~~~~~~~~~L 606 (670)
.|++-.++.+++..+.+.++| |++-.||.+.+.+.+.+.|.... . +....+. ...+. -|+ +.+ ++.+|
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~-G~te~el~~~~~~~~~~~g~~~~~~~~~~f~~~v~--~g~n~~~~H---~~p-~~~~l 84 (252)
T 1qxy_A 12 LKEIGYICAKVRNTMQAATKP-GITTKELDNIAKELFEEYGAISAPIHDENFPGQTC--ISVNEEVAH---GIP-SKRVI 84 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSE--EEETTEEEC---CCC-CSCBC
T ss_pred HHHHHHHHHHHHHHHHHHCCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceE--EcCCccccC---CCC-CCcCc
Confidence 455556666778888899999 99999999999999998876210 0 1111111 11111 111 111 46789
Q ss_pred cCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 607 VEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 607 ~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
++|.++.+.-|....+ +-.-+.-|+.|.
T Consensus 85 ~~gd~v~iD~g~~~~g-y~sD~tRT~~vG 112 (252)
T 1qxy_A 85 REGDLVNIDVSALKNG-YYADTGISFVVG 112 (252)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEECS
T ss_pred CCCCEEEEEeeEEECC-EEEEEEEEEEcC
Confidence 9999999999887654 445577788773
No 69
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=85.42 E-value=2.5 Score=44.59 Aligned_cols=95 Identities=13% Similarity=0.033 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCC--ccCccc--ccccCCcccc-CCCcccccCCCCcccc
Q 005915 533 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY--RHGTGH--GVGAALNVHE-GPQSISFRYGNMTPLV 607 (670)
Q Consensus 533 ~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~--~h~~GH--giG~~l~~hE-~P~~i~~~~~~~~~L~ 607 (670)
|++...+.+++.++.+.++| |++-.||++.+.+.+.+.|... ....++ .++ ...++ -|..+ + ++.+|+
T Consensus 113 R~A~~ia~~al~~~~~~ikp-GvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~--sg~N~~i~H~~---p-~~r~L~ 185 (368)
T 3s6b_A 113 REACILGRKTLDYAHTLVSP-GVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCC--TSVNEIVCHGI---P-DYRPLK 185 (368)
T ss_dssp HHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEE--EEETTEEECCC---C-CSCBCC
T ss_pred HHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCccccccccCCCCeEE--EcCccccccCC---C-CCcccc
Confidence 45555666778888899999 9999999999999999988621 101111 121 11222 11111 1 467999
Q ss_pred CCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 608 EGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 608 ~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
+|.++.+.-|.+..| +-.-+.-|+.|.
T Consensus 186 ~GDiV~iD~G~~~~G-Y~sDitRT~~vG 212 (368)
T 3s6b_A 186 SGDIINIDISVFYKG-VHSDLNETYFVG 212 (368)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEECS
T ss_pred CCCEEEEEEeEEECc-EEEEEEEEEEEC
Confidence 999999999987764 345567778776
No 70
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=84.12 E-value=1.6 Score=46.78 Aligned_cols=99 Identities=13% Similarity=-0.016 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC-Cc------cCcccccccCCcccc-CCCcccccCC-C
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YR------HGTGHGVGAALNVHE-GPQSISFRYG-N 602 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~-~~------h~~GHgiG~~l~~hE-~P~~i~~~~~-~ 602 (670)
.|++-.++.+++..+.+.++| |++-.||++.+.+.+.+.|-. |. .+.++.+. ..+++ -++.+. .++ +
T Consensus 28 mR~A~~i~~~~l~~~~~~ikp-Gvte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~~~--vS~N~~v~H~~P-~~~d~ 103 (401)
T 2q8k_A 28 YKMGGDIANRVLRSLVEASSS-GVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTS--ISVNNCVCHFSP-LKSDQ 103 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEEE--EEETTEEECCCC-CTTSC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCChhhcccccccCCCCCCcE--EeCCcccccCCC-CCCCC
Confidence 355556666778888899999 999999999999999887631 21 12223332 22222 111111 012 2
Q ss_pred CccccCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 603 MTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 603 ~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
+.+|++|.++.|.-|....|+ -.-+.-|+.|.
T Consensus 104 ~~~L~~GDiV~ID~G~~~~GY-~sD~tRT~~vG 135 (401)
T 2q8k_A 104 DYILKEGDLVKIDLGVHVDGF-IANVAHTFVVD 135 (401)
T ss_dssp CCBCCTTCEEEEEEEEEETTE-EEEEEEEEETT
T ss_pred CcccCCCCEEEEEEEEEECCE-EEEEEEEEEEC
Confidence 478999999999999877654 44567778775
No 71
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=83.91 E-value=4.8 Score=42.30 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCCCc-cCccc--ccccCCc---cccCCCcccccCCC-Cc
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR-HGTGH--GVGAALN---VHEGPQSISFRYGN-MT 604 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~~~-h~~GH--giG~~l~---~hE~P~~i~~~~~~-~~ 604 (670)
.+++-+++.+++.++.+.++| |++-.||.+.+.+.+.+.|-.-. .+.++ .+| .+ .|-.|. .++ +.
T Consensus 50 mR~A~~I~~~a~~~~~~~ikp-G~te~El~~~ie~~~~~~g~~~~~~~~aFpt~~s--~N~~~~H~~P~-----~~d~~~ 121 (360)
T 2nw5_A 50 ARRAAEAHRRARYRVQSIVRP-GITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMS--MNSCAAHYTVN-----PGEQDI 121 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEE--ETTEEECCCCC-----TTCCCC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHhcCCCccCccccCceee--ccccccCCCCC-----cccCCc
Confidence 455566666778888899999 99999999999999888763211 01111 133 22 122221 112 68
Q ss_pred cccCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 605 ~L~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
+|++|.++.|+-|....| +-.=+.-|+.|+
T Consensus 122 ~L~~GDlV~ID~G~~~~G-Y~sD~tRT~~v~ 151 (360)
T 2nw5_A 122 VLKEDDVLKIDFGTHSDG-RIMDSAFTVAFK 151 (360)
T ss_dssp BCCTTCEEEEEEEEEETT-EEEEEEEEEECC
T ss_pred CcCCCCEEEEEEEEEECC-EEEEEEEEEEcC
Confidence 999999999999987665 344466777773
No 72
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=83.09 E-value=6.8 Score=38.93 Aligned_cols=96 Identities=13% Similarity=0.018 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--CccCcccc--cccCCcccc-CCCcccccCCCCccc
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHG--VGAALNVHE-GPQSISFRYGNMTPL 606 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~h~~GHg--iG~~l~~hE-~P~~i~~~~~~~~~L 606 (670)
.+++.+.+.+++..+.+.++| |++-.||.+.+.+.+.+.|.. +....|+. +. ...+. .|+ ..+ ++.+|
T Consensus 17 ~r~A~~i~~~~~~~~~~~i~p-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~~~~H---~~p-~~~~l 89 (262)
T 3mx6_A 17 MRAAGKLAAETLDFITDHVKP-NVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSIC--TSINHVVCH---GIP-NDKPL 89 (262)
T ss_dssp HHHHHHHHHHHHHHHGGGCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEEC---CCC-CSCBC
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceE--ecccccccC---CCC-CCccc
Confidence 455556666777888889999 999999999999999998762 11001111 11 11111 121 112 46789
Q ss_pred cCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 607 VEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 607 ~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
++|.++.+.-|....+ +-.-+.-|+.|.
T Consensus 90 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~vG 117 (262)
T 3mx6_A 90 KNGDIVNIDVTVILDG-WYGDTSRMYYVG 117 (262)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEECS
T ss_pred CCCCEEEEEeeEEECC-EEEEEEEEEEcC
Confidence 9999999998886554 345567777774
No 73
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=82.90 E-value=7.8 Score=39.11 Aligned_cols=96 Identities=15% Similarity=-0.011 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--CccCccc--ccccCCcccc-CCCcccccCCCCccc
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGH--GVGAALNVHE-GPQSISFRYGNMTPL 606 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~h~~GH--giG~~l~~hE-~P~~i~~~~~~~~~L 606 (670)
.+++...+.+++..+.+.++| |++-.||.+.+...+.+.|.. +....|+ .++ ...+. .|+ ..+ ++.+|
T Consensus 50 ~r~A~~i~~~a~~~~~~~i~p-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~~~~H---~~p-~~~~l 122 (285)
T 3pka_A 50 MRVAGRIAAGALAEAGKAVAP-GVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCC--TSLNEVICH---GIP-DSTVI 122 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEEC---CCC-CSCBC
T ss_pred HHHHHHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHHHcCCccccccccCCCCceE--ecccceeec---CCC-CCccc
Confidence 345555566777788889999 999999999999999998863 1111111 121 11111 111 112 46789
Q ss_pred cCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 607 VEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 607 ~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
++|.++.++-|....| +-.-+.-|+.|.
T Consensus 123 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~vG 150 (285)
T 3pka_A 123 TDGDIVNIDVTAYIGG-VHGDTNATFPAG 150 (285)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEECS
T ss_pred CCCCEEEEEEEEEECC-EEEEEEEEEEcC
Confidence 9999999998876554 345567777774
No 74
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=81.92 E-value=6.4 Score=39.76 Aligned_cols=97 Identities=18% Similarity=0.064 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--CccCcccc--cccCCcccc-CCCcccccCCCCccc
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHG--VGAALNVHE-GPQSISFRYGNMTPL 606 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~h~~GHg--iG~~l~~hE-~P~~i~~~~~~~~~L 606 (670)
.+++...+.+++..+.+.++| |++-.||.+.+...+.+.|.. +....++. ++ ...+. .|. +.+..+.+|
T Consensus 43 ~r~A~~i~~~a~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~~~~H---~~p~~~~~l 116 (286)
T 3tav_A 43 MAAAGSIVGAALVAVRDAAKA-GVSTLELDQVAESVIREAGAVPSFLGYHGFPASIC--SSVNDQVVH---GIPSATAVL 116 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEE--EEETTBCSC---CCCCTTCBC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCCceE--EecCccccC---CCCCCCccc
Confidence 455556666778888889999 999999999999999998863 21101111 11 11111 122 112226899
Q ss_pred cCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 607 VEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 607 ~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
++|.++.+.-|....| +-.-+.-|+.|.
T Consensus 117 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~vG 144 (286)
T 3tav_A 117 ADGDLVSIDCGAILDG-WHGDSAWTFAVG 144 (286)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEESS
T ss_pred CCCCEEEEEEEEEECC-EEEeeEEEEECC
Confidence 9999999998876554 345567777773
No 75
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=80.63 E-value=7.3 Score=38.72 Aligned_cols=95 Identities=16% Similarity=0.093 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHcCCC--Ccc--CcccccccCCcccc-CCCcccccCCCCcc-c
Q 005915 533 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRH--GTGHGVGAALNVHE-GPQSISFRYGNMTP-L 606 (670)
Q Consensus 533 ~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~l~~~G~~--~~h--~~GHgiG~~l~~hE-~P~~i~~~~~~~~~-L 606 (670)
|++-..+.+++..+.+.++| |++-.||.+.+...+.+.|.. +.. +....+. ...++ -|. +.+ ++.+ |
T Consensus 26 r~A~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~f~~~v~--~g~n~~~~H---~~p-~~~~~l 98 (262)
T 1o0x_A 26 KKAGKAVAVALREVRKVIVP-GKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATC--VSVNEEVVH---GLP-LKEKVF 98 (262)
T ss_dssp HHHHHHHHHHHHHGGGGCST-TCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEE--EEETTBCSC---CCC-CTTCBC
T ss_pred HHHHHHHHHHHHHHHHHCCC-CCcHHHHHHHHHHHHHHcCCccccccccCCCcceE--ecccccccC---CCC-CCCccc
Confidence 44455556667777888999 999999999999999998862 211 1111122 11121 122 112 3567 9
Q ss_pred cCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 607 VEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 607 ~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
++|.++.+.-|....+ +-.-+.-|+.|.
T Consensus 99 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~vG 126 (262)
T 1o0x_A 99 KEGDIVSVDVGAVYQG-LYGDAAVTYIVG 126 (262)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEESS
T ss_pred CCCCEEEEEEEEEECC-EEEEEEEEEECC
Confidence 9999999999887654 455567777773
No 76
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=80.36 E-value=7.5 Score=38.59 Aligned_cols=97 Identities=14% Similarity=0.056 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHH-HHHcCCCCc----cCcccccccCCcccc-CCCcccccCCCCcc
Q 005915 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSS-LWKIGLDYR----HGTGHGVGAALNVHE-GPQSISFRYGNMTP 605 (670)
Q Consensus 532 ~~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~-l~~~G~~~~----h~~GHgiG~~l~~hE-~P~~i~~~~~~~~~ 605 (670)
.|++-..+.+++..+.+.++| |++-.||.+.+.+. +.+.|.... .+....+. ...+. -|+ ..+++..+
T Consensus 13 ~r~A~~i~~~~~~~~~~~i~~-G~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~--~g~n~~~~H---~~p~~~~~ 86 (263)
T 2gg2_A 13 MRVAGRLAAEVLEMIEPYVKP-GVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVC--ISINEVVCH---GIPDDAKL 86 (263)
T ss_dssp HHHHHHHHHHHHHHHGGGCST-TCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSE--EEETTEEEC---CCCCTTCB
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHhCCccccccccCCCcceE--ecccccccC---CCCCCCcC
Confidence 345555666777788889999 99999999999998 888775210 01111111 11111 111 11222378
Q ss_pred ccCCCEEEECceeeecCcceEEEEEEEEEe
Q 005915 606 LVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (670)
Q Consensus 606 L~~GMV~siEPgiy~~~~~GvriED~v~Vt 635 (670)
|++|.++.+.-|....| +-.-+.-|+.|.
T Consensus 87 l~~gd~v~iD~G~~~~g-y~sD~tRT~~vG 115 (263)
T 2gg2_A 87 LKDGDIVNIDVTVIKDG-FHGDTSKMFIVG 115 (263)
T ss_dssp CCTTCEEEEEEEEEETT-EEEEEEEEEECS
T ss_pred cCCCCEEEEEEEEEECC-EEEEEEEEEEcC
Confidence 99999999999986654 455577788773
No 77
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=75.54 E-value=2 Score=46.72 Aligned_cols=134 Identities=13% Similarity=0.062 Sum_probs=73.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCCCC-----ccccccccccceEecCCcC-CceEEEEe-CCCcEEEEccc--c
Q 005915 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQ-----SEFIAECYMRRAYISGFTG-SAGTAVVT-KDKAALWTDGR--Y 150 (670)
Q Consensus 80 ~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~-----se~~~~~~~ni~YlTGF~g-s~g~lvv~-~~~~~L~td~r--y 150 (670)
+..++.++++++|++ .++|+++|.+..+.. .+|.=.++.+-+|||||+- ..+++++. .+++.||.... |
T Consensus 11 ~~~~~~~r~~~~l~~--~~~~~~~i~~~~~~~~~~~D~~~~frq~~~f~yl~g~~e~p~~~L~~~~~~~~~l~~~~~~d~ 88 (451)
T 3rva_A 11 HIEELQARTREALQR--EGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDF 88 (451)
T ss_dssp HHHHHHHHHHHHHHH--HTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTCSCCSCSSCEEEECSSSCCEEEEECCCCT
T ss_pred HHHHHHHHHHHHHHh--CCCCEEEEECCCceEEecCCCCCCcccCCCceEEeccCCCCCEEEEEecCCCeEEEeeccHHh
Confidence 345688999999999 999998888763211 1222233455567888875 45666664 44677777643 3
Q ss_pred HHHHHhhccC----ceEEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHH
Q 005915 151 FLQAEKQLSS----SWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDV 226 (670)
Q Consensus 151 ~~qa~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~ 226 (670)
+...+..... .+.+....+ .+++.+.|.+ ...++++...+.+++.+..+ . ..+++++ .++|+.
T Consensus 89 w~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~---~~~~~~~~g~~~~~~~~~~~----~--~~~~~~~--~~~l~~ 155 (451)
T 3rva_A 89 WHKVPPEPNDFWTDSFDIKLLQQ--ADAVEKFLPY---DKSRFAYVGEYIEVAKALGF----D--NVNPDRV--LHYLHY 155 (451)
T ss_dssp TSCCCCSCCSTTGGGSEEEEESS--GGGGGGGSCS---CGGGEEEESSCHHHHHHHTC----S--CBSCHHH--HHHHHH
T ss_pred hhccccCcchhHHhccCeEEEec--HHHHHHHHhh---ccCceEEEccCcCHHHhhhh----c--ccCchHH--HHHHHH
Confidence 3222111111 133433321 2333333322 12457777766655443322 1 1355666 788888
Q ss_pred hh
Q 005915 227 IW 228 (670)
Q Consensus 227 lw 228 (670)
++
T Consensus 156 lR 157 (451)
T 3rva_A 156 QR 157 (451)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 78
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=75.10 E-value=4.7 Score=44.02 Aligned_cols=95 Identities=15% Similarity=0.034 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCChhHHHHHHHHH----HHHcCCCCccCcccccccCCcccc-CCCcccccCCCCcccc
Q 005915 533 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSS----LWKIGLDYRHGTGHGVGAALNVHE-GPQSISFRYGNMTPLV 607 (670)
Q Consensus 533 ~~~~~~v~~a~~a~~~~~~P~G~~~~ev~~~a~~~----l~~~G~~~~h~~GHgiG~~l~~hE-~P~~i~~~~~~~~~L~ 607 (670)
|++-.++.+++..+.+.++| |++-.||.+.+... +.+.|... +.|+... +.+++ -++.+. .++++.+|+
T Consensus 170 R~A~~Ia~~al~~~~~~ikp-GvTe~ELa~~le~~~~~~i~~~Ga~~--g~~FP~i--vSvN~~v~Hg~P-~~~d~r~Lk 243 (478)
T 1b6a_A 170 REAAEAHRQVRKYVMSWIKP-GMTMIEICEKLEDCSRKLIKENGLNA--GLAFPTG--CSLNNCAAHYTP-NAGDTTVLQ 243 (478)
T ss_dssp HHHHHHHHHHHHHHHHHCCT-TSBHHHHHHHHHHHHHHHHTCBTTTE--EEEEEEE--EEETTEEECCCC-CTTCCCBCC
T ss_pred HHHHHHHHHHHHHHhhhcCC-CCcHHHHHHHHHHHHHHHHHhcCCcc--cCCCCeE--EECCCccccCCC-CcccCcccc
Confidence 44445556777788889999 99999995554444 44446520 0111111 11111 111111 011347999
Q ss_pred CCCEEEECceeeecCcceEEEEEEEEE
Q 005915 608 EGMIVSNEPGYYEDHAFGIRIENLLYV 634 (670)
Q Consensus 608 ~GMV~siEPgiy~~~~~GvriED~v~V 634 (670)
+|.++.|..|....|+ -.-+.-|+.|
T Consensus 244 ~GDiV~ID~G~~~dGY-~sD~tRT~~V 269 (478)
T 1b6a_A 244 YDDICKIDFGTHISGR-IIDCAFTVTF 269 (478)
T ss_dssp TTCCEEEEEEEEETTE-EEEEEEEECS
T ss_pred CCCeEEEEEEEEECCE-EEEEEEEEEe
Confidence 9999999999877654 3334555555
No 79
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=75.01 E-value=6.9 Score=43.63 Aligned_cols=102 Identities=12% Similarity=0.004 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHhh---------CCCCCChhHHHHHHHHHHHHcC--C----CCccCcccccccCCcccc----
Q 005915 531 REKECFTRVLQGHIALDQAI---------FPQSTPGFVLDAFARSSLWKIG--L----DYRHGTGHGVGAALNVHE---- 591 (670)
Q Consensus 531 e~~~~~~~v~~a~~a~~~~~---------~P~G~~~~ev~~~a~~~l~~~G--~----~~~h~~GHgiG~~l~~hE---- 591 (670)
..|.+-+++.++...++..+ +| |++..||.....+.+.+.+ + ....+.+|.++ +.+.+
T Consensus 48 KYr~AgeIa~~vLk~v~~li~~G~~~~~~kp-ga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFPT~--ISvN~~vaH 124 (614)
T 4b6a_t 48 KYRTAGQIAQTALKYVTSLINDSYHSKTTQR-QLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIPTT--IDIDQISGG 124 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCHHHHHHTTC-CCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEEEE--EEETTEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCC-CCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccCce--ecHHHcccC
Confidence 44555555666666666554 66 7888899888777776642 1 13345666666 54433
Q ss_pred -CCCcccc---------------cCCCCccccCCCEEEECceeeecCcceEEEEEEEEEecC
Q 005915 592 -GPQSISF---------------RYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (670)
Q Consensus 592 -~P~~i~~---------------~~~~~~~L~~GMV~siEPgiy~~~~~GvriED~v~Vte~ 637 (670)
.|. .+- ....+.+|++|.|+-|.-|.+.+|. ..-...|++|.+.
T Consensus 125 ysP~-~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGy-iadvA~Tvvvg~~ 184 (614)
T 4b6a_t 125 WCPE-IDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGY-TSEVSHTMVIYPV 184 (614)
T ss_dssp CCCC-TTS------------------CCCBCCTTCEEEEEEEEEETTE-EEEEEEEEECCCC
T ss_pred CCCC-CcchhhcccccccccccccccccccccCCCEEEEEeeEEECCe-EEEEEEEEEECCc
Confidence 332 110 0113568999999999999999874 6778999999764
No 80
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=62.86 E-value=7.2 Score=43.04 Aligned_cols=134 Identities=11% Similarity=-0.003 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCCCC-----ccccccccccceEecCCcC-CceEEEEe-CCCcEEEEccc--c
Q 005915 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQ-----SEFIAECYMRRAYISGFTG-SAGTAVVT-KDKAALWTDGR--Y 150 (670)
Q Consensus 80 ~~~~Rl~~lr~~m~~~~~~lDa~lI~~~d~h~-----se~~~~~~~ni~YlTGF~g-s~g~lvv~-~~~~~L~td~r--y 150 (670)
+..++.++++++|++ .+.|+++|.+..+.. .+|.=.++.+-+|||||+- ..+++++. .+++.||.... |
T Consensus 11 h~~~~~~r~~~~l~~--~~~~~~~i~~~~~~~~~~~D~~~pFrq~s~F~yl~g~~e~p~~~l~~~~~~~~~l~~~~~~d~ 88 (517)
T 3l24_A 11 HIATLQKRTREIIER--ENLDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDF 88 (517)
T ss_dssp HHHHHHHHHHHHHHH--TTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTSSCCSCSSCEEEECSSSCCEEEEECCCCS
T ss_pred HHHHHHHHHHHHHHh--CCCCEEEEECCCceEEecCCCCCCceecCCceEEeccCCCCCEEEEEecCCCeEEEEecchhh
Confidence 345678899999999 999998887763221 1333344555678888875 55666664 34677777643 3
Q ss_pred HHHHHhhcc----CceEEEEcCCCCCCCHHHHHHhhcCCCCeEEEcCCcccHHHHHHHHHHHhcCCcEEEEcccchhHHH
Q 005915 151 FLQAEKQLS----SSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDV 226 (670)
Q Consensus 151 ~~qa~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vg~e~~~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~ 226 (670)
+...+.... ..+.+....+ .+++.+.|.+ ...++++...+.+++.+..+ . ..+++++ .++|+.
T Consensus 89 w~g~~~~~~~~~~~~~~v~~~~~--~~~~~~~L~~---~~~~~~~~g~~~~~~~~~~~----~--~~~~~~~--~~~l~~ 155 (517)
T 3l24_A 89 WHKVPDEPNEYWADYFDIELLVK--PDQVEKLLPY---DKARFAYIGEYLEVAQALGF----E--LMNPEPV--MNFYHY 155 (517)
T ss_dssp SSCCCCCCCSGGGGGSEEEEESS--GGGCGGGSCS---CCTTEEEESSCHHHHHHHTC----C--CBSCHHH--HHHHHH
T ss_pred hhccccCchhhhhhccCeEEEcC--HHHHHHHHhh---ccCceEEEcCCcCHHHhhhh----c--cCCchhH--HHHHHH
Confidence 322111000 1123433221 2333333322 12457777766655443322 1 1356666 778888
Q ss_pred hh
Q 005915 227 IW 228 (670)
Q Consensus 227 lw 228 (670)
++
T Consensus 156 lR 157 (517)
T 3l24_A 156 HR 157 (517)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 81
>3q9v_A DNA-binding response regulator; response regulator protein, DNA binding protein; 1.60A {Deinococcus radiodurans}
Probab=43.99 E-value=29 Score=30.59 Aligned_cols=59 Identities=17% Similarity=0.160 Sum_probs=41.5
Q ss_pred cccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcCCC
Q 005915 195 LFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSS 269 (670)
Q Consensus 195 ~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~glD 269 (670)
.+|-.+++-|.-.+... .+.+.- ..+++.+|+++ +. .+...+..-+.+||+.|++.+.+
T Consensus 60 ~Lt~~E~~LL~~L~~~~-g~vvsr--e~L~~~vW~~~-~~------------~~~~~l~~~I~rLRkkL~~~~~~ 118 (133)
T 3q9v_A 60 RLSPKEFDILALLIRQP-GRVYSR--QEIGQEIWQGR-LP------------EGSNVVDVHMANLRAKLRDLDGY 118 (133)
T ss_dssp CCCHHHHHHHHHHTTST-TCEEEH--HHHHHHHHTTC-CC------------TTCCHHHHHHHHHHHHHHHTTCT
T ss_pred EcCHHHHHHHHHHHHCC-CceEcH--HHHHHHHcCCC-CC------------CcHHHHHHHHHHHHHHHhccCCC
Confidence 36778887776666554 467887 89999999632 11 12235677899999999987654
No 82
>2k4j_A Putative transcriptional regulator; response regulator, acid resistance, DN binding, phosphoprotein, transcription regul; NMR {Helicobacter pylori}
Probab=42.59 E-value=20 Score=30.67 Aligned_cols=57 Identities=16% Similarity=0.101 Sum_probs=40.0
Q ss_pred ccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcCC
Q 005915 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (670)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~gl 268 (670)
+|..+++-|.-.+...+ +.+.- ..+++.+|+.+ +. .+...+..-+.+||+.|++.+.
T Consensus 42 Lt~~E~~LL~~L~~~~g-~vvsr--e~L~~~vW~~~-~~------------~~~~tl~~~I~rLRkkL~~~~~ 98 (115)
T 2k4j_A 42 LTRAEYEILSLLISKKG-YVFSR--ESIAIESESIN-PE------------SSNKSIDVIIGRLRSKIEKNPK 98 (115)
T ss_dssp SCHHHHHHHHHHHHHCC-CEECH--HHHHHHTCCSS-CT------------TCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCHHHHHHHHHHHHcCC-cEEcH--HHHHHHHcCCC-CC------------CchhHHHHHHHHHHHHhhcCCC
Confidence 57777777766665543 67776 99999999622 11 1345677889999999987553
No 83
>2z9m_A Response regulator YYCF; two-component system, YYCG, helix-turn- helix motif, DNA-binding domain, phosphorylation, transcription; 1.87A {Staphylococcus aureus} PDB: 2zxj_A 2d1v_A
Probab=41.94 E-value=21 Score=30.70 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=40.0
Q ss_pred ccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcCC
Q 005915 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (670)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~gl 268 (670)
+|-.+++-|.-.+... .+.+.- ..+++.+|+.+. ..+...+..-+.+||+.|++.+.
T Consensus 37 Lt~~E~~lL~~L~~~~-g~vvsr--~~L~~~vW~~~~-------------~~~~~~l~~~I~rLRkkL~~~~~ 93 (120)
T 2z9m_A 37 LTHREFELFHYLSKHM-GQVMTR--EHLLQTVWGYDY-------------FGDVRTVDVTIRRLREKIEDDPS 93 (120)
T ss_dssp CCHHHHHHHHHHHTTT-TCCEEH--HHHHHHHHCTTC-------------CSCTHHHHHHHHHHHHHHCSSTT
T ss_pred CCHHHHHHHHHHHHCC-CceEcH--HHHHHHHhCCCC-------------CCCcchHHHHHHHHHHHhhcCCC
Confidence 6778887776666554 367777 899999996221 12234667789999999986543
No 84
>3zq7_A KDP operon transcriptional regulatory protein KDP; response regulator; 2.52A {Escherichia coli}
Probab=36.48 E-value=33 Score=28.30 Aligned_cols=57 Identities=11% Similarity=0.137 Sum_probs=39.0
Q ss_pred ccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcCC
Q 005915 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (670)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~gl 268 (670)
+|-.+++-|.-.+... .+.+.- +.+++.+|+.+ + ..+......-+.+||+.|++.+.
T Consensus 29 Lt~~e~~lL~~L~~~~-g~~vsr--~~L~~~vw~~~-~------------~~~~~~l~~~I~rLRkkL~~~~~ 85 (102)
T 3zq7_A 29 LTPIEFRLLAVLLNNA-GKVLTQ--RQLLNQVWGPN-A------------VEHSHYLRIYMGHLRQKLEQDPA 85 (102)
T ss_dssp CCHHHHHHHHHHHHTT-TCEEEH--HHHHHHHTSSS-C------------STTHHHHHHHHHHHHHHHCSSTT
T ss_pred cCHHHHHHHHHHHHCC-CeeECH--HHHHHHhcCCC-C------------CCccchHHHHHHHHHHHhhcCCC
Confidence 6777777666655554 367776 89999999622 1 11234567889999999986543
No 85
>1gxq_A PHOB, phosphate regulon transcriptional regulatory protein; transcriptional activator, helix-winged-helix, sensory transduction; 2.0A {Escherichia coli} SCOP: a.4.6.1 PDB: 1gxp_A 1qqi_A 2z33_A 3t72_A
Probab=33.53 E-value=38 Score=28.20 Aligned_cols=58 Identities=14% Similarity=0.179 Sum_probs=41.5
Q ss_pred cccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcCC
Q 005915 195 LFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (670)
Q Consensus 195 ~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~gl 268 (670)
.+|..+++-|.-.+...+ +.+.- ..+++.+|+.+ + ..+...+..-+.+||+.|.+.+.
T Consensus 31 ~Lt~~E~~lL~~L~~~~g-~vvsr--~~L~~~vW~~~-~------------~~~~~~l~~~I~rLRkkL~~~~~ 88 (106)
T 1gxq_A 31 EMGPTEFKLLHFFMTHPE-RVYSR--EQLLNHVWGTN-V------------YVEDRTVDVHIRRLRKALEPGGH 88 (106)
T ss_dssp CCCHHHHHHHHHHHHSCS-SEECH--HHHHHHHTCSS-S------------CCCTHHHHHHHHHHHHHHGGGTG
T ss_pred EcCHHHHHHHHHHHHCCC-eeEcH--HHHHHHHcCCC-C------------CCCcccHHHHHHHHHHHhcccCC
Confidence 367788887776665543 67776 99999999622 1 12456677899999999987554
No 86
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=27.08 E-value=41 Score=32.82 Aligned_cols=44 Identities=20% Similarity=0.329 Sum_probs=33.5
Q ss_pred CCCCccccCCCEEEECceeee----cCc-ceEEEEEEEEEecCCCCCCC
Q 005915 600 YGNMTPLVEGMIVSNEPGYYE----DHA-FGIRIENLLYVKEVGTPNRF 643 (670)
Q Consensus 600 ~~~~~~L~~GMV~siEPgiy~----~~~-~GvriED~v~Vte~g~~~~~ 643 (670)
++...+|.||.-+++.|++|- .+. |.+-+.+.=-+.+|.+.|.|
T Consensus 170 aG~~i~L~PGESiTl~Pg~~H~F~ae~g~G~vligEVSt~NDD~~DN~F 218 (246)
T 3kmh_A 170 AGSQLRLSPGESICLPPGLYHSFWAEAGFGDVLVGEVSSVNDDDHDNHF 218 (246)
T ss_dssp TTCEEEECTTCEEEECTTEEEEEEECTTSCCEEEEEEEECCCTTTSEEE
T ss_pred CCCEEEECCCCeEecCCCCEEEEEecCCCccEEEEEcccCcCCCCCccc
Confidence 356779999999999999984 233 34888988888888776654
No 87
>1opc_A OMPR, OMPRC; transcription regulation, response regulator, winged helix, osmoregulation; 1.95A {Escherichia coli} SCOP: a.4.6.1 PDB: 1odd_A 2jpb_A
Probab=26.91 E-value=42 Score=28.08 Aligned_cols=58 Identities=14% Similarity=0.115 Sum_probs=40.0
Q ss_pred cccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcCC
Q 005915 195 LFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (670)
Q Consensus 195 ~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~gl 268 (670)
.+|..+++-|.-.+... .+.+.- ..+++.+|+.+ +. .+...+..-+.+||+.|+..+.
T Consensus 31 ~Lt~~E~~lL~~L~~~~-g~~vsr--~~L~~~vW~~~-~~------------~~~~~l~~~I~rLRkkL~~~~~ 88 (110)
T 1opc_A 31 PLTSGEFAVLKALVSHP-REPLSR--DKLMNLARGRE-YS------------AMERSIDVQISRLRRMVEEDPA 88 (110)
T ss_dssp CCCHHHHHHHHHHHHST-TCCEEH--HHHHHHHCCSS-SC------------TTSSCHHHHHHHHHHHHCSCTT
T ss_pred EcCHHHHHHHHHHHHcC-CceEcH--HHHHHHHcCCC-CC------------CCcchHHHHHHHHHHHhhcCCC
Confidence 36777777776666554 367777 99999999632 11 1234567789999999976543
No 88
>2hwv_A DNA-binding response regulator VICR; essential response regulator, C-terminal domain, DNA-binding transcription; 1.90A {Enterococcus faecalis}
Probab=23.91 E-value=42 Score=28.87 Aligned_cols=57 Identities=16% Similarity=0.127 Sum_probs=38.9
Q ss_pred ccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcCC
Q 005915 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (670)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~gl 268 (670)
+|..+++-|.-.+...+ +.+.- ..+++.+|+.+ + ..+...+..-+.+||+.|++.+.
T Consensus 44 Lt~~E~~LL~~L~~~~g-~vvsr--e~L~~~vW~~~-~------------~~~~~tl~~~I~rLRkkL~~~~~ 100 (121)
T 2hwv_A 44 LTHREFELLYYLAKHIG-QVMTR--EHLLQTVWGYD-Y------------FGDVRTVDVTVRRLREKIEDSPS 100 (121)
T ss_dssp CCHHHHHHHHHHHHTTT-CCBCH--HHHHHHHTCGG-G------------TTCHHHHHHHHHHHHHHHCSSTT
T ss_pred CCHHHHHHHHHHHHcCC-eEEcH--HHHHHHHcCCC-C------------CCCccHHHHHHHHHHHHHhhcCC
Confidence 56777777766655543 56676 88999999621 1 12345677889999999976543
No 89
>2zxj_A Transcriptional regulatory protein WALR; two-component system, YYCG, response regulator, helix-turn-H motif, DNA-binding domain; 1.87A {Staphylococcus aureus} PDB: 2d1v_A
Probab=22.54 E-value=47 Score=28.71 Aligned_cols=57 Identities=12% Similarity=0.116 Sum_probs=39.5
Q ss_pred cccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcC
Q 005915 195 LFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAG 267 (670)
Q Consensus 195 ~~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~g 267 (670)
.+|..+++-|.-.+...| +.+.- ..+++.+|+.+ ...+...+..-+.+||+.|++.+
T Consensus 36 ~Lt~~E~~lL~~L~~~~g-~vvsr--e~L~~~vWg~~-------------~~~~~~~l~v~I~rLRkKL~~~~ 92 (120)
T 2zxj_A 36 ELTHREFELFHYLSKHMG-QVMTR--EHLLQTVWGYD-------------YFGDVRTVDVTIRRLREKIEDDP 92 (120)
T ss_dssp CCCHHHHHHHHHHHTTTT-CCBCH--HHHHHHHHCTT-------------CCSCTHHHHHHHHHHHHHHCSST
T ss_pred EcCHHHHHHHHHHHhCCC-ceEcH--HHHHHHhcCCC-------------CCCCCcChHHHHHHHHHHHhhCC
Confidence 478888888877666553 56665 88999999722 11122456778999999998643
No 90
>3rjp_A COVR; winged helix-turn-helix, DNA binding, DNA binding protein; 1.50A {Streptococcus pyogenes}
Probab=21.58 E-value=36 Score=27.69 Aligned_cols=56 Identities=14% Similarity=0.186 Sum_probs=38.1
Q ss_pred ccHHHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHcC
Q 005915 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAG 267 (670)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~g 267 (670)
+|-.+++-|.-.+... .+.+.- ..+++.+|+.+. ..+......-+.+||+.|++.+
T Consensus 23 Lt~~E~~lL~~L~~~~-g~~vsr--~~L~~~vw~~~~-------------~~~~~~l~~~I~rLRkkL~~~~ 78 (96)
T 3rjp_A 23 LTKREYDLLNILMTNM-NRVMTR--EELLSNVWKYDE-------------AVETNVVDVYIRYLRGKIDIPG 78 (96)
T ss_dssp CCHHHHHHHHHHHHTT-TSCBCH--HHHHHHHSSSCS-------------SCCTHHHHHHHHHHHHHHCCTT
T ss_pred cCHHHHHHHHHHHhCC-CeeEcH--HHHHHHHcCCCC-------------CCCcchHHHHHHHHHHHhcccC
Confidence 5667777666655544 356676 889999996321 1223567789999999998654
No 91
>2hqn_A Putative transcriptional regulator; phosporylation-independent response regulator, signaling Pro; NMR {Helicobacter pylori}
Probab=20.38 E-value=89 Score=25.94 Aligned_cols=52 Identities=17% Similarity=0.283 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhcCCcEEEEcccchhHHHhhhcCCCCCCCcccccccccccchhHHHHHHHHHHHHHHc
Q 005915 199 DAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDA 266 (670)
Q Consensus 199 ~~~~~L~~~l~~~~~~lv~~~~~~lv~~lw~~~rp~~~~~~~~~~~~~~s~~e~~~Rl~rlr~~M~e~ 266 (670)
..++-|.-.+... .+.+.- ..+++.+|+.+ ...+...+..-+.+||+.|.+.
T Consensus 33 ~E~~lL~~L~~~~-g~~vsr--~~L~~~vW~~~-------------~~~~~~~l~~~I~rLRkkL~~~ 84 (109)
T 2hqn_A 33 KPFEVLTHLARHR-DQIVSK--EQLLDAIWEEP-------------EMVTPNVIEVAINQIRQKMDKP 84 (109)
T ss_dssp STHHHHHHHHHHT-CSEEEH--HHHHHHHCCSC-------------GGGCTTHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHCC-CeeEcH--HHHHHHHcCCC-------------CCCCcchHHHHHHHHHHHhccc
Confidence 3444443333333 257776 99999999621 1124567788999999999865
Done!