BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005916
(670 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/264 (50%), Positives = 175/264 (66%), Gaps = 5/264 (1%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLK 85
R++++ IG+G+FKTVYK D +EVAWC+++ + +S + +R E LK L+
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS--ERQRFKEEAEXLKGLQ 83
Query: 86 HNNIIRFYNSW--IDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLI 143
H NI+RFY+SW K + ++TEL TSG+L+ Y W RQIL GL
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQ 143
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD 203
+LH+ PPIIHRDLKCDNIFI G G VKIGDLGLAT+ + AK+VIGTPEF APE Y+
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYE 203
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFI 263
E Y+E D+Y+FG C LE T EYPYSEC+N+AQIY++V+SG+KPA+ KV PEVK I
Sbjct: 204 EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII 263
Query: 264 EKCLVP-ASQRLSAKELLMDPFLQ 286
E C+ +R S K+LL F Q
Sbjct: 264 EGCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 139/268 (51%), Gaps = 19/268 (7%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P C + KE IG G+F TV++A E +G +VA ++ ++ + E + EV ++K
Sbjct: 35 PWCD-LNIKEKIGAGSFGTVHRA--EWHGSDVA-VKILMEQDFHA-ERVNEFLREVAIMK 89
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX-----XXGWARQ 137
L+H NI+ F + Q ++I+TE + GSL YR A
Sbjct: 90 RLRHPNIVLFMGA--VTQPPNLSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMAYD 145
Query: 138 ILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA--NAKSVIGTPE 195
+ G+ YLH+ +PPI+HR+LK N+ ++ + VK+ D GL+ + ++KS GTPE
Sbjct: 146 VAKGMNYLHNRNPPIVHRNLKSPNLLVD-KKYTVKVCDFGLSRLKASTFLSSKSAAGTPE 204
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MAPE L DE NE +D+YSFG+ + E+ T + P+ N AQ+ V K + +
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAVGFKCKRLEIPRN 263
Query: 255 KDPEVKSFIEKCLVPASQRLSAKELLMD 282
+P+V + IE C + + +MD
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 137/268 (51%), Gaps = 19/268 (7%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P C + KE IG G+F TV++A E +G +VA ++ ++ + E + EV ++K
Sbjct: 35 PWCD-LNIKEKIGAGSFGTVHRA--EWHGSDVA-VKILMEQDFHA-ERVNEFLREVAIMK 89
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX-----XXGWARQ 137
L+H NI+ F + Q ++I+TE + GSL YR A
Sbjct: 90 RLRHPNIVLFMGA--VTQPPNLSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMAYD 145
Query: 138 ILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA--NAKSVIGTPE 195
+ G+ YLH+ +PPI+HRDLK N+ ++ + VK+ D GL+ + +K GTPE
Sbjct: 146 VAKGMNYLHNRNPPIVHRDLKSPNLLVD-KKYTVKVCDFGLSRLKASXFLXSKXAAGTPE 204
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MAPE L DE NE +D+YSFG+ + E+ T + P+ N AQ+ V K + +
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAVGFKCKRLEIPRN 263
Query: 255 KDPEVKSFIEKCLVPASQRLSAKELLMD 282
+P+V + IE C + + +MD
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 145/301 (48%), Gaps = 22/301 (7%)
Query: 1 MESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVR 60
M S+E+G + D+LE D + V+GKG + VY D N + +A ++
Sbjct: 2 MRSTEEGDC-----ESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP 56
Query: 61 IDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR--- 117
D S + L+ E+ L K LKH NI+++ S+ +N + I E GSL
Sbjct: 57 ERDSRYS----QPLHEEIALHKHLKHKNIVQYLGSF--SENGFIKIFMEQVPGGSLSALL 110
Query: 118 QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLG 177
+ + + +QIL GL YLH D I+HRD+K DN+ IN G +KI D G
Sbjct: 111 RSKWGPLKDNEQTIGFYTKQILEGLKYLH--DNQIVHRDIKGDNVLINTYSGVLKISDFG 168
Query: 178 LATIMEQAN--AKSVIGTPEFMAPELYDE---NYNELADIYSFGMCMLEMVTFEYPYSEC 232
+ + N ++ GT ++MAPE+ D+ Y + ADI+S G ++EM T + P+ E
Sbjct: 169 TSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228
Query: 233 RNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVNGTT 291
KV + + E K+FI KC P +R A +LL+D FL+V+
Sbjct: 229 GEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKK 288
Query: 292 K 292
K
Sbjct: 289 K 289
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 131/250 (52%), Gaps = 14/250 (5%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
R ++ IG+G F VY+A ++G+ VA +V+I D++ + + + E+ LLK L H
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI-KEIDLLKQLNHP 92
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSL----RQYRXXXXXXXXXXXXGWARQILSGLI 143
N+I++Y S+I+D +NI+ EL +G L + ++ + Q+ S L
Sbjct: 93 NVIKYYASFIEDNE--LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPEL 201
++HS ++HRD+K N+FI G VK+GDLGL + A S++GTP +M+PE
Sbjct: 151 HMHSRR--VMHRDIKPANVFITAT-GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 202 YDEN-YNELADIYSFGMCMLEMVTFEYP-YSECRNSAQIYKKVSSGIKPAALSKVKDPEV 259
EN YN +DI+S G + EM + P Y + N + KK+ P S E+
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL 267
Query: 260 KSFIEKCLVP 269
+ + C+ P
Sbjct: 268 RQLVNMCINP 277
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
V+GKG + VY D N + +A ++ D S + L+ E+ L K LKH NI+++
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS----QPLHEEIALHKHLKHKNIVQY 70
Query: 93 YNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
S+ +N + I E GSL + + + +QIL GL YLH D
Sbjct: 71 LGSF--SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH--D 126
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN--AKSVIGTPEFMAPELYDE--- 204
I+HRD+K DN+ IN G +KI D G + + N ++ GT ++MAPE+ D+
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 205 NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 264
Y + ADI+S G ++EM T + P+ E KV + + E K+FI
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 246
Query: 265 KCLVP-ASQRLSAKELLMDPFLQ 286
KC P +R A +LL+D FL+
Sbjct: 247 KCFEPDPDKRACANDLLVDEFLK 269
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 138/274 (50%), Gaps = 23/274 (8%)
Query: 22 DPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLL 81
DP +Y R+ E IG+GA TVY A D G EVA +R ++ Q P+ E + +E+ ++
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKK-ELIINEILVM 71
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+ K+ NI+ + +S++ + ++ E GSL R+ L
Sbjct: 72 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQA 128
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAP 199
L +LHS+ +IHRD+K DNI + G G VK+ D G + EQ+ +++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 200 ELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI----KPAALSKV 254
E+ Y DI+S G+ +EM+ E PY +Y ++G P LS +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 255 KDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQV 287
+ F+ +CL + +R SAKELL FL++
Sbjct: 246 ----FRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 22 DPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLL 81
DP +Y R+ E IG+GA TVY A D G EVA +R ++ Q P+ E + +E+ ++
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKK-ELIINEILVM 71
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+ K+ NI+ + +S++ + ++ E GSL R+ L
Sbjct: 72 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQA 128
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAP 199
L +LHS+ +IHRD+K DNI + G G VK+ D G + EQ+ ++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
Query: 200 ELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI----KPAALSKV 254
E+ Y DI+S G+ +EM+ E PY +Y ++G P LS +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 255 KDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQV 287
+ F+ +CL + +R SAKELL FL++
Sbjct: 246 ----FRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 22 DPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLL 81
DP +Y R+ E IG+GA TVY A D G EVA +R ++ Q P+ E + +E+ ++
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKK-ELIINEILVM 71
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+ K+ NI+ + +S++ + ++ E GSL R+ L
Sbjct: 72 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQA 128
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAP 199
L +LHS+ +IHRD+K DNI + G G VK+ D G + EQ+ ++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
Query: 200 ELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI----KPAALSKV 254
E+ Y DI+S G+ +EM+ E PY +Y ++G P LS +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 255 KDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQV 287
+ F+ +CL + +R SAKELL FL++
Sbjct: 246 ----FRDFLNRCLEMDVEKRGSAKELLQHQFLKI 275
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 22 DPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLL 81
DP +Y R+ E IG+GA TVY A D G EVA +R ++ Q P+ E + +E+ ++
Sbjct: 18 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKK-ELIINEILVM 72
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+ K+ NI+ + +S++ + ++ E GSL R+ L
Sbjct: 73 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQA 129
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAP 199
L +LHS+ +IHRD+K DNI + G G VK+ D G + EQ+ ++GTP +MAP
Sbjct: 130 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
Query: 200 ELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI----KPAALSKV 254
E+ Y DI+S G+ +EM+ E PY +Y ++G P LS +
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 246
Query: 255 KDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQV 287
+ F+ +CL + +R SAKEL+ FL++
Sbjct: 247 ----FRDFLNRCLEMDVEKRGSAKELIQHQFLKI 276
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 23/274 (8%)
Query: 22 DPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLL 81
DP +Y R+ E IG+GA TVY A D G EVA +R ++ Q P+ E + +E+ ++
Sbjct: 18 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKK-ELIINEILVM 72
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+ K+ NI+ + +S++ + ++ E GSL R+ L
Sbjct: 73 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQA 129
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAP 199
L +LHS+ +IHR++K DNI + G G VK+ D G + EQ+ +++GTP +MAP
Sbjct: 130 LEFLHSNQ--VIHRNIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 186
Query: 200 ELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI----KPAALSKV 254
E+ Y DI+S G+ +EM+ E PY +Y ++G P LS +
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 246
Query: 255 KDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQV 287
+ F+ +CL + +R SAKEL+ FL++
Sbjct: 247 ----FRDFLNRCLEMDVEKRGSAKELIQHQFLKI 276
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 135/265 (50%), Gaps = 26/265 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E +G+G++ +VYKA + G VA QV ++ DL+ + E+ +++ ++++
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVK 88
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQ-YRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+Y S+ +N + I+ E +GS+ R + L GL YLH
Sbjct: 89 YYGSYF--KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELYDE-NYN 207
IHRD+K NI +N +G K+ D G+A + AK VIGTP +MAPE+ E YN
Sbjct: 147 --IHRDIKAGNILLN-TEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 208 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKS-----F 262
+ADI+S G+ +EM + PY++ I+ + + P + PE+ S F
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYADIHPMRAIF-MIPTNPPPT----FRKPELWSDNFTDF 258
Query: 263 IEKCLVPA-SQRLSAKELLMDPFLQ 286
+++CLV + QR +A +LL PF++
Sbjct: 259 VKQCLVKSPEQRATATQLLQHPFVR 283
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 131/270 (48%), Gaps = 20/270 (7%)
Query: 29 RYK--EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSL 84
RYK V+GKG+F V D++ G E C V++ Q + D E L EV LLK L
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQE---CAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIY 144
H NI++ Y + D ++ E++T G L RQ+LSG+ Y
Sbjct: 107 DHPNIMKLYEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 164
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQ--GEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
+H + I+HRDLK +N+ + ++I D GL+T E + K IGT ++APE+
Sbjct: 165 MHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 222
Query: 202 YDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEV 259
Y+E D++S G+ + +++ P++ N I KKV G L + K
Sbjct: 223 LHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESA 281
Query: 260 KSFIEKCL--VPASQRLSAKELLMDPFLQV 287
K I K L VP S R+SA++ L ++Q
Sbjct: 282 KDLIRKMLTYVP-SMRISARDALDHEWIQT 310
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 131/270 (48%), Gaps = 20/270 (7%)
Query: 29 RYK--EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSL 84
RYK V+GKG+F V D++ G E C V++ Q + D E L EV LLK L
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQE---CAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIY 144
H NI++ Y + D ++ E++T G L RQ+LSG+ Y
Sbjct: 108 DHPNIMKLYEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 165
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQ--GEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
+H + I+HRDLK +N+ + ++I D GL+T E + K IGT ++APE+
Sbjct: 166 MHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 223
Query: 202 YDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEV 259
Y+E D++S G+ + +++ P++ N I KKV G L + K
Sbjct: 224 LHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESA 282
Query: 260 KSFIEKCL--VPASQRLSAKELLMDPFLQV 287
K I K L VP S R+SA++ L ++Q
Sbjct: 283 KDLIRKMLTYVP-SMRISARDALDHEWIQT 311
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 29 RYK--EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSL 84
RYK V+GKG+F V D++ G E C V++ Q + D E L EV LLK L
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQE---CAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIY 144
H NI++ Y + D ++ E++T G L RQ+LSG+ Y
Sbjct: 84 DHPNIMKLYEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQ--GEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPEL 201
+H + I+HRDLK +N+ + ++I D GL+T E + K IGT ++APE+
Sbjct: 142 MHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 199
Query: 202 YDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEV 259
Y+E D++S G+ + +++ P++ N I KKV G L + K
Sbjct: 200 LHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESA 258
Query: 260 KSFIEKCL--VPASQRLSAKELLMDPFLQ 286
K I K L VP S R+SA++ L ++Q
Sbjct: 259 KDLIRKMLTYVP-SMRISARDALDHEWIQ 286
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 116/243 (47%), Gaps = 43/243 (17%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
V+G+GAF V KA + ++ A ++R + E L + SEV LL SL H ++R+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 93 YNSWIDDQN-----------KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA--RQIL 139
Y +W++ +N T+ I E +G+L W RQIL
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDL-IHSENLNQQRDEYWRLFRQIL 126
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA-------------- 185
L Y+HS IIHRDLK NIFI+ ++ VKIGD GLA + ++
Sbjct: 127 EALSYIHSQG--IIHRDLKPMNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 186 --NAKSVIGTPEFMAPELYD--ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 241
N S IGT ++A E+ D +YNE D+YS G+ EM+ YP+S I KK
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKK 240
Query: 242 VSS 244
+ S
Sbjct: 241 LRS 243
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 13/260 (5%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
++GKG+F V K D + E A +V I+ +D + EV LLK L H NI++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA-VKV-INKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPI 152
+ I + + + I+ EL+T G L +Q+ SG+ Y+H H+ I
Sbjct: 87 FE--ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--I 142
Query: 153 IHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQ-ANAKSVIGTPEFMAPELYDENYNEL 209
+HRDLK +NI + + + +KI D GL+T +Q K IGT ++APE+ Y+E
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEK 202
Query: 210 ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEVKSFIEKCL 267
D++S G+ + +++ P+ +N I K+V +G L + + + K I K L
Sbjct: 203 CDVWSAGVILYILLSGTPPFY-GKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 268 V-PASQRLSAKELLMDPFLQ 286
S R++A + L P++Q
Sbjct: 262 TFHPSLRITATQCLEHPWIQ 281
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 25/247 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H NI+ F
Sbjct: 20 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Q + I+T+ SL + ARQ G+ YLH+
Sbjct: 74 MGYSTKPQ---LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS-- 128
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE---LYDE 204
IIHRDLK +NIF++ + VKIGD GLAT+ + + + + G+ +MAPE + D
Sbjct: 129 IIHRDLKSNNIFLHEDN-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N Y+ +D+Y+FG+ + E++T + PYS N QI + V G LSKV+ +K
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 247
Query: 261 SFIEKCL 267
+ +CL
Sbjct: 248 RLMAECL 254
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 13/260 (5%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
++GKG+F V K D + E A +V I+ +D + EV LLK L H NI++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA-VKV-INKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPI 152
+ I + + + I+ EL+T G L +Q+ SG+ Y+H H+ I
Sbjct: 87 FE--ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--I 142
Query: 153 IHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQ-ANAKSVIGTPEFMAPELYDENYNEL 209
+HRDLK +NI + + + +KI D GL+T +Q K IGT ++APE+ Y+E
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEK 202
Query: 210 ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEVKSFIEKCL 267
D++S G+ + +++ P+ +N I K+V +G L + + + K I K L
Sbjct: 203 CDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 268 V-PASQRLSAKELLMDPFLQ 286
S R++A + L P++Q
Sbjct: 262 TFHPSLRITATQCLEHPWIQ 281
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 139/281 (49%), Gaps = 14/281 (4%)
Query: 27 YIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
Y R K+ +G GA+ V D+V +E A +R V S +L EV +LK L H
Sbjct: 39 YQRVKK-LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNS--KLLEEVAVLKLLDH 95
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLH 146
NI++ Y+ + D +N ++ E + G L +Q+LSG+ YLH
Sbjct: 96 PNIMKLYDFFEDKRN--YYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH 153
Query: 147 SHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIME-QANAKSVIGTPEFMAPELYD 203
H+ I+HRDLK +N+ + + + +KI D GL+ + E Q K +GT ++APE+
Sbjct: 154 KHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR 211
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPE--VKS 261
+ Y+E D++S G+ + ++ YP + +I +KV G + K+ K
Sbjct: 212 KKYDEKCDVWSIGVILFILLA-GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKD 270
Query: 262 FIEKCLVPASQ-RLSAKELLMDPFLQVNGTTKNRPLPLPDI 301
I++ L SQ R+SA++ L P+++ + K + LP +
Sbjct: 271 LIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSL 311
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 21/294 (7%)
Query: 16 PDVLETDPTC--RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
PDVL DP RY+R + +GKG F Y+ D ++ EV +V +L P E+
Sbjct: 32 PDVL-VDPRTMKRYMRGR-FLGKGGFAKCYEITD-MDTKEVFAGKVVPKSMLLKPHQKEK 88
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG 133
+ +E+ + KSL + +++ F+ + DD V ++ E+ SL +
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 191
+ RQ + G+ YLH++ +IHRDLK N+F+N + +VKIGD GLAT +E K++
Sbjct: 147 FMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKTLC 203
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY-SECRNSAQIYKKVSSGIKPA 249
GTP ++APE L + ++ DI+S G + ++ + P+ + C I K + P
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR 263
Query: 250 ALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVL 303
++ V ++ + + R S ELL D F T+ P+ LP L
Sbjct: 264 HINPVASALIRRMLH---ADPTLRPSVAELLTDEFF----TSGYAPMRLPTSCL 310
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 13/260 (5%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
++GKG+F V K D + E A +V I+ +D + EV LLK L H NI++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA-VKV-INKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPI 152
+ I + + + I+ EL+T G L +Q+ SG+ Y+H H+ I
Sbjct: 87 FE--ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--I 142
Query: 153 IHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQ-ANAKSVIGTPEFMAPELYDENYNEL 209
+HRDLK +NI + + + +KI D GL+T +Q K IGT ++APE+ Y+E
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEK 202
Query: 210 ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEVKSFIEKCL 267
D++S G+ + +++ P+ +N I K+V +G L + + + K I K L
Sbjct: 203 CDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 268 V-PASQRLSAKELLMDPFLQ 286
S R++A + L P++Q
Sbjct: 262 TFHPSLRITATQCLEHPWIQ 281
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 61/252 (24%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
V+G+GAF V KA + ++ A ++R + E L + SEV LL SL H ++R+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 93 YNSWIDDQN-----------KTVNI---------ITELFTSGSLRQYRXXXXXXXXXXXX 132
Y +W++ +N T+ I + +L S +L Q R
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY--------- 118
Query: 133 GWA--RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA----- 185
W RQIL L Y+HS IIHRDLK NIFI+ ++ VKIGD GLA + ++
Sbjct: 119 -WRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRN-VKIGDFGLAKNVHRSLDILK 174
Query: 186 -----------NAKSVIGTPEFMAPELYD--ENYNELADIYSFGMCMLEMVTFEYPYSEC 232
N S IGT ++A E+ D +YNE D+YS G+ EM+ YP+S
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTG 231
Query: 233 RNSAQIYKKVSS 244
I KK+ S
Sbjct: 232 MERVNILKKLRS 243
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 29 RYK--EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSL 84
RYK V+GKG+F V D++ G E C V++ Q + D E L EV LLK L
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQE---CAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIY 144
H NI++ Y + D ++ E++T G L RQ+LSG+ Y
Sbjct: 90 DHPNIMKLYEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQ--GEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPEL 201
+H + I+HRDLK +N+ + ++I D GL+T E + K IGT ++APE+
Sbjct: 148 MHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 205
Query: 202 YDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEV 259
Y+E D++S G+ + +++ P++ N I KKV G L + K
Sbjct: 206 LHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESA 264
Query: 260 KSFIEKCL--VPASQRLSAKELLMDPFLQ 286
K I K L VP S R+SA++ L ++Q
Sbjct: 265 KDLIRKMLTYVP-SMRISARDALDHEWIQ 292
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 21/294 (7%)
Query: 16 PDVLETDPTC--RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
PDVL DP RY+R + +GKG F Y+ D ++ EV +V +L P E+
Sbjct: 32 PDVL-VDPRTMKRYMRGR-FLGKGGFAKCYEITD-MDTKEVFAGKVVPKSMLLKPHQKEK 88
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG 133
+ +E+ + KSL + +++ F+ + DD V ++ E+ SL +
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 191
+ RQ + G+ YLH++ +IHRDLK N+F+N + +VKIGD GLAT +E K +
Sbjct: 147 FMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLC 203
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY-SECRNSAQIYKKVSSGIKPA 249
GTP ++APE L + ++ DI+S G + ++ + P+ + C I K + P
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR 263
Query: 250 ALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVL 303
++ V ++ + + R S ELL D F T+ P+ LP L
Sbjct: 264 HINPVASALIRRMLH---ADPTLRPSVAELLTDEFF----TSGYAPMRLPTSCL 310
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 21/294 (7%)
Query: 16 PDVLETDPTC--RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
PDVL DP RY+R + +GKG F Y+ D ++ EV +V +L P E+
Sbjct: 32 PDVL-VDPRTMKRYMRGR-FLGKGGFAKCYEITD-MDTKEVFAGKVVPKSMLLKPHQKEK 88
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG 133
+ +E+ + KSL + +++ F+ + DD V ++ E+ SL +
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 191
+ RQ + G+ YLH++ +IHRDLK N+F+N + +VKIGD GLAT +E K +
Sbjct: 147 FMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKXLC 203
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY-SECRNSAQIYKKVSSGIKPA 249
GTP ++APE L + ++ DI+S G + ++ + P+ + C I K + P
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR 263
Query: 250 ALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVL 303
++ V ++ + + R S ELL D F T+ P+ LP L
Sbjct: 264 HINPVASALIRRMLH---ADPTLRPSVAELLTDEFF----TSGYAPMRLPTSCL 310
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 129/269 (47%), Gaps = 20/269 (7%)
Query: 29 RYK--EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSL 84
RYK V+GKG+F V D++ G E C V++ Q + D E L EV LLK L
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQE---CAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIY 144
H NI + Y + D ++ E++T G L RQ+LSG+ Y
Sbjct: 84 DHPNIXKLYEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQ--GEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPEL 201
H + I+HRDLK +N+ + ++I D GL+T E + K IGT ++APE+
Sbjct: 142 XHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEV 199
Query: 202 YDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEV 259
Y+E D++S G+ + +++ P++ N I KKV G L + K
Sbjct: 200 LHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESA 258
Query: 260 KSFIEKCL--VPASQRLSAKELLMDPFLQ 286
K I K L VP S R+SA++ L ++Q
Sbjct: 259 KDLIRKXLTYVP-SXRISARDALDHEWIQ 286
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 21/294 (7%)
Query: 16 PDVLETDPTC--RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
PDVL DP RY+R + +GKG F Y+ D ++ EV +V +L P E+
Sbjct: 16 PDVL-VDPRTMKRYMRGR-FLGKGGFAKCYEITD-MDTKEVFAGKVVPKSMLLKPHQKEK 72
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG 133
+ +E+ + KSL + +++ F+ + DD V ++ E+ SL +
Sbjct: 73 MSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICRRRSLLELHKRRKAVTEPEARY 130
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 191
+ RQ + G+ YLH++ +IHRDLK N+F+N + +VKIGD GLAT +E K +
Sbjct: 131 FMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLC 187
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY-SECRNSAQIYKKVSSGIKPA 249
GTP ++APE L + ++ DI+S G + ++ + P+ + C I K + P
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR 247
Query: 250 ALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVL 303
++ V ++ + + R S ELL D F T+ P+ LP L
Sbjct: 248 HINPVASALIRRMLH---ADPTLRPSVAELLTDEFF----TSGYAPMRLPTSCL 294
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG G++ K + +G + W ++ + ++ + + L SEV+LL+ LKH NI+R+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHPNIVRYY 71
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIY----LHSHD 149
+ ID N T+ I+ E G L + ++++ L H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 150 ---PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDE 204
++HRDLK N+F++G Q VK+GD GLA I+ + + AK+ +GTP +M+PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNR 190
Query: 205 -NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV---KDPEVK 260
+YNE +DI+S G + E+ P+ +A K+++ I+ ++ E+
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 261 SFIEKCL-VPASQRLSAKELLMDPFL 285
I + L + R S +E+L +P +
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG G++ K + +G + W ++ + ++ + + L SEV+LL+ LKH NI+R+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHPNIVRYY 71
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIY----LHSHD 149
+ ID N T+ I+ E G L + ++++ L H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 150 ---PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDE 204
++HRDLK N+F++G Q VK+GD GLA I+ + + AK+ +GTP +M+PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNR 190
Query: 205 -NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV---KDPEVK 260
+YNE +DI+S G + E+ P+ +A K+++ I+ ++ E+
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 261 SFIEKCL-VPASQRLSAKELLMDPFL 285
I + L + R S +E+L +P +
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 133/275 (48%), Gaps = 32/275 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V+I V+ +PE + +EV +L+ +H NI+ F
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVA---VKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLF 97
Query: 93 YNSWIDDQNKTVNIITELFTSGSL-RQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
D + I+T+ SL + ARQ G+ YLH+ +
Sbjct: 98 MGYMTKD---NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN-- 152
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE----FMAPE---LYDE 204
IIHRD+K +NIF++ VKIGD GLAT+ + + + P +MAPE + D
Sbjct: 153 IIHRDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N ++ +D+YS+G+ + E++T E PYS N QI V G LSK+ +K
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMK 271
Query: 261 SFIEKCLVPAS-------QRLSAKELLMDPFLQVN 288
+ C+ Q LS+ ELL ++N
Sbjct: 272 RLVADCVKKVKEERPLFPQILSSIELLQHSLPKIN 306
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 25/247 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H NI+ F
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Q + I+T+ SL + ARQ G+ YLH+
Sbjct: 98 MGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 152
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE---LYDE 204
IIHRDLK +NIF++ + VKIGD GLAT+ + + + + G+ +MAPE + D+
Sbjct: 153 IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N Y+ +D+Y+FG+ + E++T + PYS N QI V G LSKV+ +K
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 271
Query: 261 SFIEKCL 267
+ +CL
Sbjct: 272 RLMAECL 278
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 25/247 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H NI+ F
Sbjct: 43 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 96
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Q + I+T+ SL + ARQ G+ YLH+
Sbjct: 97 MGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 151
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE---LYDE 204
IIHRDLK +NIF++ + VKIGD GLAT+ + + + + G+ +MAPE + D+
Sbjct: 152 IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 210
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N Y+ +D+Y+FG+ + E++T + PYS N QI V G LSKV+ +K
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 270
Query: 261 SFIEKCL 267
+ +CL
Sbjct: 271 RLMAECL 277
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 4 SEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDD 63
S D A E PD I + IG G+F TVYK + +G +VA V++ +
Sbjct: 12 SRDAADDWEIPDGQ----------ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLN 55
Query: 64 VLQ-SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RX 121
V +P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 56 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ---LAIVTQWCEGSSLYHHLHA 112
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT
Sbjct: 113 SETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDN-TVKIGDFGLATE 169
Query: 182 MEQANA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECR 233
+ + + + G+ +MAPE + D N Y+ +D+Y+FG+ + E++T + PYS
Sbjct: 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
Query: 234 NSAQIYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 267
N QI + V G LSKV+ +K + +CL
Sbjct: 230 NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECL 266
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG G++ K + +G + W ++ + ++ + + L SEV+LL+ LKH NI+R+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHPNIVRYY 71
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIY----LHSHD 149
+ ID N T+ I+ E G L + ++++ L H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 150 ---PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDE 204
++HRDLK N+F++G Q VK+GD GLA I+ ++ AK +GTP +M+PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNR 190
Query: 205 -NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV---KDPEVK 260
+YNE +DI+S G + E+ P+ +A K+++ I+ ++ E+
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 261 SFIEKCL-VPASQRLSAKELLMDPFL 285
I + L + R S +E+L +P +
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 25/247 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H NI+ F
Sbjct: 21 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Q + I+T+ SL + ARQ G+ YLH+
Sbjct: 75 MGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 129
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE---LYDE 204
IIHRDLK +NIF++ + VKIGD GLAT+ + + + + G+ +MAPE + D+
Sbjct: 130 IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N Y+ +D+Y+FG+ + E++T + PYS N QI V G LSKV+ +K
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 248
Query: 261 SFIEKCL 267
+ +CL
Sbjct: 249 RLMAECL 255
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 130/253 (51%), Gaps = 25/253 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKH 86
I + IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H
Sbjct: 26 ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYL 145
NI+ F Q + I+T+ SL + ARQ G+ YL
Sbjct: 80 VNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE- 200
H+ IIHRDLK +NIF++ + VKIGD GLAT + + + + G+ +MAPE
Sbjct: 137 HAKS--IIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 201 --LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD- 256
+ D N Y+ +D+Y+FG+ + E++T + PYS N QI + V G LSKV+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 253
Query: 257 --PEVKSFIEKCL 267
+K + +CL
Sbjct: 254 CPKRMKRLMAECL 266
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 140/272 (51%), Gaps = 24/272 (8%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDD--VLQSPEDLERLYSEVHLLKSLKHNNII 90
++GKG+F VY+A GLEVA +++ D + ++R+ +EV + LKH +I+
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVA---IKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSIL 74
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
YN + +D N V ++ E+ +G + +Y + + QI++G++YLHSH
Sbjct: 75 ELYN-YFEDSN-YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELYDENYN 207
I+HRDL N+ + N +KI D GLAT ++ + K ++ GTP +++PE+ + +
Sbjct: 133 --ILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 208 EL-ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV--SSGIKPAALSKVKDPEVKSFIE 264
L +D++S G CM + P + KV + P+ LS E K I
Sbjct: 190 GLESDVWSLG-CMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLS----IEAKDLIH 244
Query: 265 KCLV--PASQRLSAKELLMDPFLQVNGTTKNR 294
+ L PA RLS +L PF+ N +TK++
Sbjct: 245 QLLRRNPA-DRLSLSSVLDHPFMSRNSSTKSK 275
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 25/247 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H NI+ F
Sbjct: 21 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Q + I+T+ SL + ARQ G+ YLH+
Sbjct: 75 MGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 129
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE---LYDE 204
IIHRDLK +NIF++ + VKIGD GLAT+ + + + + G+ +MAPE + D+
Sbjct: 130 IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N Y+ +D+Y+FG+ + E++T + PYS N QI V G LSKV+ +K
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 248
Query: 261 SFIEKCL 267
+ +CL
Sbjct: 249 RLMAECL 255
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 25/247 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H NI+ F
Sbjct: 18 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 71
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Q + I+T+ SL + ARQ G+ YLH+
Sbjct: 72 MGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 126
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE---LYDE 204
IIHRDLK +NIF++ + VKIGD GLAT+ + + + + G+ +MAPE + D+
Sbjct: 127 IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 185
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N Y+ +D+Y+FG+ + E++T + PYS N QI V G LSKV+ +K
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 245
Query: 261 SFIEKCL 267
+ +CL
Sbjct: 246 RLMAECL 252
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 25/247 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H NI+ F
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Q + I+T+ SL + ARQ G+ YLH+
Sbjct: 70 MGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE---LYDE 204
IIHRDLK +NIF++ + VKIGD GLAT+ + + + + G+ +MAPE + D+
Sbjct: 125 IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N Y+ +D+Y+FG+ + E++T + PYS N QI V G LSKV+ +K
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243
Query: 261 SFIEKCL 267
+ +CL
Sbjct: 244 RLMAECL 250
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 25/247 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H NI+ F
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Q + I+T+ SL + ARQ G+ YLH+
Sbjct: 70 MGYSTAPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE---LYDE 204
IIHRDLK +NIF++ + VKIGD GLAT+ + + + + G+ +MAPE + D+
Sbjct: 125 IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N Y+ +D+Y+FG+ + E++T + PYS N QI V G LSKV+ +K
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243
Query: 261 SFIEKCL 267
+ +CL
Sbjct: 244 RLMAECL 250
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 132/275 (48%), Gaps = 16/275 (5%)
Query: 19 LETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEV 78
L+ DP + + E IGKG+F V+K D VA ++I D+ ++ +++E + E+
Sbjct: 16 LKADPEELFTKL-EKIGKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEI 71
Query: 79 HLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQI 138
+L + ++Y S++ D + II E GS R+I
Sbjct: 72 TVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALDLLEPGPLDETQIAT-ILREI 128
Query: 139 LSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEF 196
L GL YLHS IHRD+K N+ ++ GEVK+ D G+A + K +GTP +
Sbjct: 129 LKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 185
Query: 197 MAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK 255
MAPE+ ++ Y+ ADI+S G+ +E+ E P+SE ++ + P L
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF--LIPKNNPPTLEGNY 243
Query: 256 DPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNG 289
+K F+E CL S R +AKELL F+ N
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 278
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 134/275 (48%), Gaps = 15/275 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F ++ D + EV ++ +L P E++ E+ + +SL H +++ F+
Sbjct: 29 LGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D N V ++ EL SL + + RQI+ G YLH + +I
Sbjct: 88 GFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 143
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-A 210
HRDLK N+F+N + EVKIGD GLAT +E K++ GTP ++APE+ + +
Sbjct: 144 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 202
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VP 269
D++S G M ++ + P+ E + Y ++ ++ K +P S I+K L
Sbjct: 203 DVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTD 259
Query: 270 ASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLP 304
+ R + ELL D F +G R LP+ + +P
Sbjct: 260 PTARPTINELLNDEFF-TSGYIPAR-LPITCLTIP 292
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 128/247 (51%), Gaps = 25/247 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H NI+ F
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Q + I+T+ SL + ARQ G+ YLH+
Sbjct: 98 MGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 152
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE---LYDE 204
IIHRDLK +NIF++ + VKIGD GLAT + + + + G+ +MAPE + D+
Sbjct: 153 IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N Y+ +D+Y+FG+ + E++T + PYS N QI V G LSKV+ +K
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 271
Query: 261 SFIEKCL 267
+ +CL
Sbjct: 272 RLMAECL 278
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G GAF VYKA ++ + A ++ D +S E+LE E+ +L S H NI++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA---AKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXX-XXXXXXXGWARQILSGLIYLHSHDPPI 152
+++ + N + I+ E G++ +Q L L YLH D I
Sbjct: 101 DAFYYENN--LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH--DNKI 156
Query: 153 IHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELY------DE 204
IHRDLK NI + G++K+ D G++ + + S IGTP +MAPE+ D
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 205 NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK-DPEVKSFI 263
Y+ AD++S G+ ++EM E P+ E N ++ K++ P + K F+
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274
Query: 264 EKCLVP-ASQRLSAKELLMDPFLQVNGTTKNRPL 296
+KCL R + +LL PF+ V+ N+P+
Sbjct: 275 KKCLEKNVDARWTTSQLLQHPFVTVDS---NKPI 305
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 117/252 (46%), Gaps = 61/252 (24%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
V+G+GAF V KA + ++ A ++R + E L + SEV LL SL H ++R+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 93 YNSWIDDQN-----------KTVNI---------ITELFTSGSLRQYRXXXXXXXXXXXX 132
Y +W++ +N T+ I + +L S +L Q R
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY--------- 118
Query: 133 GWA--RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA----- 185
W RQIL L Y+HS IIHR+LK NIFI+ ++ VKIGD GLA + ++
Sbjct: 119 -WRLFRQILEALSYIHSQG--IIHRNLKPXNIFIDESRN-VKIGDFGLAKNVHRSLDILK 174
Query: 186 -----------NAKSVIGTPEFMAPELYD--ENYNELADIYSFGMCMLEMVTFEYPYSEC 232
N S IGT ++A E+ D +YNE D YS G+ E + YP+S
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTG 231
Query: 233 RNSAQIYKKVSS 244
I KK+ S
Sbjct: 232 XERVNILKKLRS 243
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 134/275 (48%), Gaps = 15/275 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F ++ D + EV ++ +L P E++ E+ + +SL H +++ F+
Sbjct: 25 LGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D N V ++ EL SL + + RQI+ G YLH + +I
Sbjct: 84 GFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 139
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-A 210
HRDLK N+F+N + EVKIGD GLAT +E K++ GTP ++APE+ + +
Sbjct: 140 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VP 269
D++S G M ++ + P+ E + Y ++ ++ K +P S I+K L
Sbjct: 199 DVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTD 255
Query: 270 ASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLP 304
+ R + ELL D F +G R LP+ + +P
Sbjct: 256 PTARPTINELLNDEFF-TSGYIPAR-LPITCLTIP 288
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 142/298 (47%), Gaps = 17/298 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F ++ D + EV ++ +L P E++ E+ + +SL H +++ F+
Sbjct: 25 LGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D N V ++ EL SL + + RQI+ G YLH + +I
Sbjct: 84 GFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 139
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-A 210
HRDLK N+F+N + EVKIGD GLAT +E K++ GTP ++APE+ + +
Sbjct: 140 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VP 269
D++S G M ++ + P+ E + Y ++ ++ K +P S I+K L
Sbjct: 199 DVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTD 255
Query: 270 ASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCL--MSEGPASVRNK 325
+ R + ELL D F +G R LP+ + +P + L + P +V NK
Sbjct: 256 PTARPTINELLNDEFF-TSGYIPAR-LPITCLTIPPXFSIAPSSLDPSNRKPLTVLNK 311
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G GAF VYKA ++ + A ++ D +S E+LE E+ +L S H NI++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA---AKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXX-XXXXXXXGWARQILSGLIYLHSHDPPI 152
+++ + N + I+ E G++ +Q L L YLH D I
Sbjct: 101 DAFYYENN--LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH--DNKI 156
Query: 153 IHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELY------DE 204
IHRDLK NI + G++K+ D G++ + + S IGTP +MAPE+ D
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 205 NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK-DPEVKSFI 263
Y+ AD++S G+ ++EM E P+ E N ++ K++ P + K F+
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274
Query: 264 EKCLVP-ASQRLSAKELLMDPFLQVNGTTKNRPL 296
+KCL R + +LL PF+ V+ N+P+
Sbjct: 275 KKCLEKNVDARWTTSQLLQHPFVTVDS---NKPI 305
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 128/247 (51%), Gaps = 25/247 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H NI+ F
Sbjct: 36 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 89
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Q + I+T+ SL + ARQ G+ YLH+
Sbjct: 90 MGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 144
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE---LYDE 204
IIHRDLK +NIF++ + VKIGD GLAT + + + + G+ +MAPE + D+
Sbjct: 145 IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 203
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N Y+ +D+Y+FG+ + E++T + PYS N QI V G LSKV+ +K
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 263
Query: 261 SFIEKCL 267
+ +CL
Sbjct: 264 RLMAECL 270
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 18/275 (6%)
Query: 15 DPDVLET----DPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPED 70
DPDV E DP + +E IG G+F VY A D N VA ++ QS E
Sbjct: 40 DPDVAELFFKDDPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEK 97
Query: 71 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 130
+ + EV L+ L+H N I++ ++ + T ++ E +
Sbjct: 98 WQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEYCLGSASDLLEVHKKPLQEVE 155
Query: 131 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV 190
L GL YLHSH+ +IHRD+K NI ++ G VK+GD G A+IM AN
Sbjct: 156 IAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPAN--XF 210
Query: 191 IGTPEFMAPEL---YDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI 246
+GTP +MAPE+ DE Y+ D++S G+ +E+ + P + +Y ++
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNE 269
Query: 247 KPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLM 281
PA S ++F++ CL Q E+L+
Sbjct: 270 SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 304
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 15/262 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E IGKG+F V+K D VA ++I D+ ++ +++E + E+ +L + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
+Y S++ D + II E GS R+IL GL YLHS
Sbjct: 70 YYGSYLKDTK--LWIIMEYLGGGSALDLLEPGPLDETQIAT-ILREILKGLDYLHSEKK- 125
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELYDEN-YNE 208
IHRD+K N+ ++ GEVK+ D G+A + K + +GTP +MAPE+ ++ Y+
Sbjct: 126 -IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 183
Query: 209 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL- 267
ADI+S G+ +E+ E P+SE ++ + P L +K F+E CL
Sbjct: 184 KADIWSLGITAIELARGEPPHSELHPMKVLF--LIPKNNPPTLEGNYSKPLKEFVEACLN 241
Query: 268 VPASQRLSAKELLMDPFLQVNG 289
S R +AKELL F+ N
Sbjct: 242 KEPSFRPTAKELLKHKFILRNA 263
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 134/276 (48%), Gaps = 35/276 (12%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN-NII 90
E++G G + VYK G A +++ DV E E + E+++LK H+ NI
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAA---IKVMDVTGDEE--EEIKQEINMLKKYSHHRNIA 84
Query: 91 RFYNSWI-------DDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW----ARQIL 139
+Y ++I DDQ + ++ E +GS+ W R+IL
Sbjct: 85 TYYGAFIKKNPPGMDDQ---LWLVMEFCGAGSVTDL--IKNTKGNTLKEEWIAYICREIL 139
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFM 197
GL +LH H +IHRD+K N+ + N EVK+ D G++ +++ + + IGTP +M
Sbjct: 140 RGLSHLHQHK--VIHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196
Query: 198 APELY--DEN----YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAAL 251
APE+ DEN Y+ +D++S G+ +EM P + ++ + P
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-LIPRNPAPRLK 255
Query: 252 SKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQ 286
SK + +SFIE CLV SQR + ++L+ PF++
Sbjct: 256 SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIR 291
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 132/267 (49%), Gaps = 15/267 (5%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLK 85
RY R K+ +G GA+ V D++ G E A ++ V + + L EV +LK L
Sbjct: 5 RYQRVKK-LGSGAYGEVLLCKDKLTGAERAIKIIKKSSV-TTTSNSGALLDEVAVLKQLD 62
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
H NI++ Y + D +N ++ E++ G L +Q+LSG YL
Sbjct: 63 HPNIMKLYEFFEDKRN--YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 120
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIME-QANAKSVIGTPEFMAPELY 202
H H+ I+HRDLK +N+ + + +KI D GL+ E K +GT ++APE+
Sbjct: 121 HKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 178
Query: 203 DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG---IKPAALSKVKDPEV 259
+ Y+E D++S G+ +L ++ YP + +I K+V G P ++V D E
Sbjct: 179 RKKYDEKCDVWSCGV-ILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD-EA 236
Query: 260 KSFIEKCLV-PASQRLSAKELLMDPFL 285
K ++ L S+R+SA+E L P++
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 128/247 (51%), Gaps = 25/247 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRF 92
IG G+F TVYK + +G +VA V++ +V +P+ L+ +EV +L+ +H NI+ F
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Q + I+T+ SL + ARQ G+ YLH+
Sbjct: 70 MGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPE---LYDE 204
IIHRDLK +NIF++ + VKIGD GLAT + + + + G+ +MAPE + D+
Sbjct: 125 IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 205 N-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---PEVK 260
N Y+ +D+Y+FG+ + E++T + PYS N QI V G LSKV+ +K
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243
Query: 261 SFIEKCL 267
+ +CL
Sbjct: 244 RLMAECL 250
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 15/262 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E IGKG+F V+K D VA ++I D+ ++ +++E + E+ +L + +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 89
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
+Y S++ D + II E GS R+IL GL YLHS
Sbjct: 90 YYGSYLKDTK--LWIIMEYLGGGSALDLLEPGPLDETQIAT-ILREILKGLDYLHSEKK- 145
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELYDEN-YNE 208
IHRD+K N+ ++ GEVK+ D G+A + K + +GTP +MAPE+ ++ Y+
Sbjct: 146 -IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 203
Query: 209 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL- 267
ADI+S G+ +E+ E P+SE ++ + P L +K F+E CL
Sbjct: 204 KADIWSLGITAIELARGEPPHSELHPMKVLF--LIPKNNPPTLEGNYSKPLKEFVEACLN 261
Query: 268 VPASQRLSAKELLMDPFLQVNG 289
S R +AKELL F+ N
Sbjct: 262 KEPSFRPTAKELLKHKFILRNA 283
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 32/285 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+G+ V A ++ +G +VA V++ D L+ + E L++EV +++ +H N++ Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVA---VKMMD-LRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 94 NSWIDDQNKTVNIITELFTSGSLR----QYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
S++ + + ++ E G+L Q R +L L YLH+
Sbjct: 109 KSYLVGEE--LWVLMEFLQGGALTDIVSQVRLNEEQIATV-----CEAVLQALAYLHAQG 161
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDEN-Y 206
+IHRD+K D+I + + G VK+ D G + + K ++GTP +MAPE+ + Y
Sbjct: 162 --VIHRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLY 218
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK-DPEVKSFIEK 265
DI+S G+ ++EMV E PY + Q K++ P + K P ++ F+E+
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLER 277
Query: 266 CLVPASQ-RLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAF 309
LV Q R +A+ELL PFL G LP+ ++P + +
Sbjct: 278 MLVRDPQERATAQELLDHPFLLQTG--------LPECLVPLIQLY 314
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 133/275 (48%), Gaps = 15/275 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F ++ D + EV ++ +L P E++ E+ + +SL H +++ F+
Sbjct: 47 LGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D N V ++ EL SL + + RQI+ G YLH + +I
Sbjct: 106 GFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 161
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-A 210
HRDLK N+F+N + EVKIGD GLAT +E K + GTP ++APE+ + +
Sbjct: 162 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VP 269
D++S G M ++ + P+ E + Y ++ ++ K +P S I+K L
Sbjct: 221 DVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTD 277
Query: 270 ASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLP 304
+ R + ELL D F +G R LP+ + +P
Sbjct: 278 PTARPTINELLNDEFF-TSGYIPAR-LPITCLTIP 310
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 133/275 (48%), Gaps = 15/275 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F ++ D + EV ++ +L P E++ E+ + +SL H +++ F+
Sbjct: 49 LGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D N V ++ EL SL + + RQI+ G YLH + +I
Sbjct: 108 GFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 163
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-A 210
HRDLK N+F+N + EVKIGD GLAT +E K + GTP ++APE+ + +
Sbjct: 164 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VP 269
D++S G M ++ + P+ E + Y ++ ++ K +P S I+K L
Sbjct: 223 DVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTD 279
Query: 270 ASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLP 304
+ R + ELL D F +G R LP+ + +P
Sbjct: 280 PTARPTINELLNDEFF-TSGYIPAR-LPITCLTIP 312
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+G+ V A +G VA V+ D L+ + E L++EV +++ +H N++ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 214
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
NS++ + ++ E G+L +L L LH+ +I
Sbjct: 215 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 269
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDE-NYNELA 210
HRD+K D+I + + G VK+ D G + E K ++GTP +MAPEL Y
Sbjct: 270 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA--LSKVKDPEVKSFIEKCLV 268
DI+S G+ ++EMV E PY + K + + P L KV P +K F+++ LV
Sbjct: 329 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKV-SPSLKGFLDRLLV 386
Query: 269 --PASQRLSAKELLMDPFLQVNG 289
PA QR +A ELL PFL G
Sbjct: 387 RDPA-QRATAAELLKHPFLAKAG 408
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 15/262 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E IGKG+F V+K D VA ++I D+ ++ +++E + E+ +L + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
+Y S++ D + II E GS R+IL GL YLHS
Sbjct: 70 YYGSYLKDTK--LWIIMEYLGGGSALDLLEPGPLDETQIAT-ILREILKGLDYLHSEKK- 125
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELYDEN-YNE 208
IHRD+K N+ ++ GEVK+ D G+A + K +GTP +MAPE+ ++ Y+
Sbjct: 126 -IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS 183
Query: 209 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL- 267
ADI+S G+ +E+ E P+SE ++ + P L +K F+E CL
Sbjct: 184 KADIWSLGITAIELARGEPPHSELHPMKVLF--LIPKNNPPTLEGNYSKPLKEFVEACLN 241
Query: 268 VPASQRLSAKELLMDPFLQVNG 289
S R +AKELL F+ N
Sbjct: 242 KEPSFRPTAKELLKHKFILRNA 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 132/267 (49%), Gaps = 15/267 (5%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLK 85
RY R K+ +G GA+ V D++ G E A ++ V + + L EV +LK L
Sbjct: 22 RYQRVKK-LGSGAYGEVLLCKDKLTGAERAIKIIKKSSV-TTTSNSGALLDEVAVLKQLD 79
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
H NI++ Y + D +N ++ E++ G L +Q+LSG YL
Sbjct: 80 HPNIMKLYEFFEDKRN--YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 137
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIME-QANAKSVIGTPEFMAPELY 202
H H+ I+HRDLK +N+ + + +KI D GL+ E K +GT ++APE+
Sbjct: 138 HKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 195
Query: 203 DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG---IKPAALSKVKDPEV 259
+ Y+E D++S G+ +L ++ YP + +I K+V G P ++V D E
Sbjct: 196 RKKYDEKCDVWSCGV-ILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD-EA 253
Query: 260 KSFIEKCLV-PASQRLSAKELLMDPFL 285
K ++ L S+R+SA+E L P++
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 133/275 (48%), Gaps = 15/275 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F ++ D + EV ++ +L P E++ E+ + +SL H +++ F+
Sbjct: 23 LGKGGFAKCFEISD-ADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D N V ++ EL SL + + RQI+ G YLH + +I
Sbjct: 82 GFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 137
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-A 210
HRDLK N+F+N + EVKIGD GLAT +E K + GTP ++APE+ + +
Sbjct: 138 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VP 269
D++S G M ++ + P+ E + Y ++ ++ K +P S I+K L
Sbjct: 197 DVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTD 253
Query: 270 ASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLP 304
+ R + ELL D F +G R LP+ + +P
Sbjct: 254 PTARPTINELLNDEFF-TSGYIPAR-LPITCLTIP 286
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 131/278 (47%), Gaps = 32/278 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G GAF VYKA ++ + A ++ D +S E+LE E+ +L S H NI++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA---AKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXX-XXXXXXXGWARQILSGLIYLHSHDPPI 152
+++ + N + I+ E G++ +Q L L YLH D I
Sbjct: 101 DAFYYENN--LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH--DNKI 156
Query: 153 IHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV------IGTPEFMAPELY---- 202
IHRDLK NI + G++K+ D G++ N + + IGTP +MAPE+
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSA----KNTRXIQRRDXFIGTPYWMAPEVVMCET 211
Query: 203 --DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK-DPEV 259
D Y+ AD++S G+ ++EM E P+ E N ++ K++ P +
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 260 KSFIEKCLVP-ASQRLSAKELLMDPFLQVNGTTKNRPL 296
K F++KCL R + +LL PF+ V+ N+P+
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDS---NKPI 305
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 18/275 (6%)
Query: 15 DPDVLET----DPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPED 70
DPDV E DP + +E IG G+F VY A D N VA ++ QS E
Sbjct: 1 DPDVAELFFKDDPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEK 58
Query: 71 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 130
+ + EV L+ L+H N I++ ++ + T ++ E +
Sbjct: 59 WQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEYCLGSASDLLEVHKKPLQEVE 116
Query: 131 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV 190
L GL YLHSH+ +IHRD+K NI ++ G VK+GD G A+IM AN
Sbjct: 117 IAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPAN--XF 171
Query: 191 IGTPEFMAPEL---YDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI 246
+GTP +MAPE+ DE Y+ D++S G+ +E+ + P + +Y ++
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNE 230
Query: 247 KPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLM 281
PA S ++F++ CL Q E+L+
Sbjct: 231 SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 265
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 29/264 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDV----LQSPEDLERLYSEVHLLKS 83
I +EV+G+GAF V KA + R DV ++S + + E+ L
Sbjct: 11 IEVEEVVGRGAFGVVCKA------------KWRAKDVAIKQIESESERKAFIVELRQLSR 58
Query: 84 LKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX---XXXXXXXXGWARQILS 140
+ H NI++ Y + ++ V ++ E GSL W Q
Sbjct: 59 VNHPNIVKLYGACLNP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 114
Query: 141 GLIYLHSHDP-PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAP 199
G+ YLHS P +IHRDLK N+ + +KI D G A + Q + + G+ +MAP
Sbjct: 115 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNKGSAAWMAP 173
Query: 200 ELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSA-QIYKKVSSGIKPAALSKVKDP 257
E+++ NY+E D++S+G+ + E++T P+ E A +I V +G +P + + P
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP 233
Query: 258 EVKSFIEKCLVP-ASQRLSAKELL 280
++S + +C SQR S +E++
Sbjct: 234 -IESLMTRCWSKDPSQRPSMEEIV 256
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 26/280 (9%)
Query: 30 YKEVIGK-GAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN 88
+ E+IG+ G F VYKA ++ + A ++ D +S E+LE E+ +L S H N
Sbjct: 13 FWEIIGELGDFGKVYKAQNKETSVLAA---AKVIDT-KSEEELEDYMVEIDILASCDHPN 68
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXX-XXXXXXXGWARQILSGLIYLHS 147
I++ +++ + N + I+ E G++ +Q L L YLH
Sbjct: 69 IVKLLDAFYYENN--LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH- 125
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK---SVIGTPEFMAPELY-- 202
D IIHRDLK NI + G++K+ D G++ + + S IGTP +MAPE+
Sbjct: 126 -DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 203 ----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK-DP 257
D Y+ AD++S G+ ++EM E P+ E N ++ K++ P +
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSS 242
Query: 258 EVKSFIEKCLVP-ASQRLSAKELLMDPFLQVNGTTKNRPL 296
K F++KCL R + +LL PF+ V+ N+P+
Sbjct: 243 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS---NKPI 279
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 29/264 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDV----LQSPEDLERLYSEVHLLKS 83
I +EV+G+GAF V KA + R DV ++S + + E+ L
Sbjct: 10 IEVEEVVGRGAFGVVCKA------------KWRAKDVAIKQIESESERKAFIVELRQLSR 57
Query: 84 LKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX---XXXXXXXXGWARQILS 140
+ H NI++ Y + ++ V ++ E GSL W Q
Sbjct: 58 VNHPNIVKLYGACLN----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 113
Query: 141 GLIYLHSHDP-PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAP 199
G+ YLHS P +IHRDLK N+ + +KI D G A + Q + + G+ +MAP
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNKGSAAWMAP 172
Query: 200 ELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSA-QIYKKVSSGIKPAALSKVKDP 257
E+++ NY+E D++S+G+ + E++T P+ E A +I V +G +P + + P
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP 232
Query: 258 EVKSFIEKCLVP-ASQRLSAKELL 280
++S + +C SQR S +E++
Sbjct: 233 -IESLMTRCWSKDPSQRPSMEEIV 255
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+G+ V A +G VA V+ D L+ + E L++EV +++ +H N++ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 137
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
NS++ + ++ E G+L +L L LH+ +I
Sbjct: 138 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 192
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDE-NYNELA 210
HRD+K D+I + + G VK+ D G + E K ++GTP +MAPEL Y
Sbjct: 193 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA--LSKVKDPEVKSFIEKCLV 268
DI+S G+ ++EMV E PY + K + + P L KV P +K F+++ LV
Sbjct: 252 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKV-SPSLKGFLDRLLV 309
Query: 269 --PASQRLSAKELLMDPFLQVNG 289
PA QR +A ELL PFL G
Sbjct: 310 RDPA-QRATAAELLKHPFLAKAG 331
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+G+ V A +G VA V+ D L+ + E L++EV +++ +H N++ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 94
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
NS++ + ++ E G+L +L L LH+ +I
Sbjct: 95 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 149
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDE-NYNELA 210
HRD+K D+I + + G VK+ D G + E K ++GTP +MAPEL Y
Sbjct: 150 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA--LSKVKDPEVKSFIEKCLV 268
DI+S G+ ++EMV E PY + K + + P L KV P +K F+++ LV
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKV-SPSLKGFLDRLLV 266
Query: 269 --PASQRLSAKELLMDPFLQVNG 289
PA QR +A ELL PFL G
Sbjct: 267 RDPA-QRATAAELLKHPFLAKAG 288
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 11/230 (4%)
Query: 72 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXX 131
E +Y+E+ LLKSL H NII+ ++ + D K ++TE + G L +
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFED--KKYFYLVTEFYEGGELFEQIINRHKFDECDA 148
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQG--EVKIGDLGLATIMEQ-ANAK 188
+QILSG+ YLH H+ I+HRD+K +NI + +KI D GL++ + +
Sbjct: 149 ANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR 206
Query: 189 SVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP 248
+GT ++APE+ + YNE D++S G+ M ++ YP +N I KKV G
Sbjct: 207 DRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLC-GYPPFGGQNDQDIIKKVEKGKYY 265
Query: 249 AALSKVKD--PEVKSFIEKCLV-PASQRLSAKELLMDPFLQVNGTTKNRP 295
+ K+ E K I+ L ++R +A+E L +++ N+
Sbjct: 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKS 315
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+G+ V A +G VA V+ D L+ + E L++EV +++ +H N++ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
NS++ + ++ E G+L +L L LH+ +I
Sbjct: 93 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 147
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDE-NYNELA 210
HRD+K D+I + + G VK+ D G + E K ++GTP +MAPEL Y
Sbjct: 148 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA--LSKVKDPEVKSFIEKCLV 268
DI+S G+ ++EMV E PY + K + + P L KV P +K F+++ LV
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKV-SPSLKGFLDRLLV 264
Query: 269 --PASQRLSAKELLMDPFLQVNG 289
PA QR +A ELL PFL G
Sbjct: 265 RDPA-QRATAAELLKHPFLAKAG 286
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+G+ V A +G VA V+ D L+ + E L++EV +++ +H N++ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
NS++ + ++ E G+L +L L LH+ +I
Sbjct: 88 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 142
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDE-NYNELA 210
HRD+K D+I + + G VK+ D G + E K ++GTP +MAPEL Y
Sbjct: 143 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA--LSKVKDPEVKSFIEKCLV 268
DI+S G+ ++EMV E PY + K + + P L KV P +K F+++ LV
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKV-SPSLKGFLDRLLV 259
Query: 269 --PASQRLSAKELLMDPFLQVNG 289
PA QR +A ELL PFL G
Sbjct: 260 RDPA-QRATAAELLKHPFLAKAG 281
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+G+ V A +G VA V+ D L+ + E L++EV +++ +H N++ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
NS++ + ++ E G+L +L L LH+ +I
Sbjct: 84 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 138
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDE-NYNELA 210
HRD+K D+I + + G VK+ D G + E K ++GTP +MAPEL Y
Sbjct: 139 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA--LSKVKDPEVKSFIEKCLV 268
DI+S G+ ++EMV E PY + K + + P L KV P +K F+++ LV
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKV-SPSLKGFLDRLLV 255
Query: 269 --PASQRLSAKELLMDPFLQVNG 289
PA QR +A ELL PFL G
Sbjct: 256 RDPA-QRATAAELLKHPFLAKAG 277
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 18/262 (6%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+G+ V A ++ G +VA V+ D L+ + E L++EV +++ H+N++ Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVA---VKKMD-LRKQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+S++ + ++ E G+L +L L YLH+ +I
Sbjct: 109 SSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIATVCLSVLRALSYLHNQG--VI 163
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDE-NYNELA 210
HRD+K D+I + + G +K+ D G + E K ++GTP +MAPE+ Y
Sbjct: 164 HRDIKSDSILLTSD-GRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA--LSKVKDPEVKSFIEKCLV 268
DI+S G+ ++EM+ E PY Q +++ + P L KV ++ F++ LV
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFN-EPPLQAMRRIRDSLPPRVKDLHKVSS-VLRGFLDLMLV 280
Query: 269 -PASQRLSAKELLMDPFLQVNG 289
SQR +A+ELL PFL++ G
Sbjct: 281 REPSQRATAQELLGHPFLKLAG 302
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 13/221 (5%)
Query: 29 RYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHN 87
R ++ IGKG F V A + G EVA V+I D Q +P L++L+ EV ++K L H
Sbjct: 18 RLQKTIGKGNFAKVKLARHVLTGREVA---VKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NI++ + + + KT+ ++ E + G + Y RQI+S + Y
Sbjct: 75 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--C 130
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-EN 205
H I+HRDLK +N+ ++G+ +KI D G + N + G+P + APEL+ +
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMN-IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 206 YN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
Y+ D++S G+ + +V+ P+ + +N ++ ++V G
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRG 229
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RYK V +G G TVY A D + ++VA + I + E L+R EVH L H
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPP-REKEETLKRFEREVHNSSQLSH 70
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLH 146
NI+ + +D+++ ++ E +L +Y + QIL G+ H
Sbjct: 71 QNIVSMID--VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI--KH 126
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN---AKSVIGTPEFMAPE-LY 202
+HD I+HRD+K NI I+ N+ +KI D G+A + + + V+GT ++ +PE
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNK-TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK 185
Query: 203 DENYNELADIYSFGMCMLEMVTFEYPYS 230
E +E DIYS G+ + EM+ E P++
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 129/262 (49%), Gaps = 14/262 (5%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
KE +GKGAF V + + GLE A + + S D ++L E + + L+H NI+
Sbjct: 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIV 91
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
R ++S ++ ++ +L T G L + +QIL + Y HS+
Sbjct: 92 RLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG- 148
Query: 151 PIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYDEN-Y 206
I+HR+LK +N+ + VK+ D GLA + + A GTP +++PE+ ++ Y
Sbjct: 149 -IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 207
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI--KPAALSKVKDPEVKSFIE 264
++ DI++ G+ +L ++ YP + ++Y ++ +G P+ PE KS I+
Sbjct: 208 SKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266
Query: 265 KCL-VPASQRLSAKELLMDPFL 285
L V +R++A + L P++
Sbjct: 267 SMLTVNPKKRITADQALKVPWI 288
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 23/274 (8%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G GAF VYKA ++ G A ++ + +S E+LE E+ +L + H I++
Sbjct: 27 LGDGAFGKVYKAKNKETG---ALAAAKVIET-KSEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA-RQILSGLIYLHSHDPPI 152
++ D + I+ E G++ RQ+L L +LHS I
Sbjct: 83 GAYYHDGK--LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR--I 138
Query: 153 IHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELY------DE 204
IHRDLK N+ + +G++++ D G++ + K S IGTP +MAPE+ D
Sbjct: 139 IHRDLKAGNVLMT-LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 205 NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK-DPEVKSFI 263
Y+ ADI+S G+ ++EM E P+ E N ++ K++ P L+ K E + F+
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLTPSKWSVEFRDFL 256
Query: 264 EKCLVPASQ-RLSAKELLMDPFLQVNGTTKNRPL 296
+ L + R SA +LL PF V+ T N+ L
Sbjct: 257 KIALDKNPETRPSAAQLLEHPF--VSSITSNKAL 288
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 23/274 (8%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G GAF VYKA ++ G A ++ + +S E+LE E+ +L + H I++
Sbjct: 19 LGDGAFGKVYKAKNKETG---ALAAAKVIET-KSEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA-RQILSGLIYLHSHDPPI 152
++ D + I+ E G++ RQ+L L +LHS I
Sbjct: 75 GAYYHDGK--LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR--I 130
Query: 153 IHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELY------DE 204
IHRDLK N+ + +G++++ D G++ + K S IGTP +MAPE+ D
Sbjct: 131 IHRDLKAGNVLMT-LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 205 NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK-DPEVKSFI 263
Y+ ADI+S G+ ++EM E P+ E N ++ K++ P L+ K E + F+
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLTPSKWSVEFRDFL 248
Query: 264 EKCLVPASQ-RLSAKELLMDPFLQVNGTTKNRPL 296
+ L + R SA +LL PF V+ T N+ L
Sbjct: 249 KIALDKNPETRPSAAQLLEHPF--VSSITSNKAL 280
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 16/263 (6%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
KE +GKGAF V + + GLE A I+ S D ++L E + + L+H NI+
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFA--AKIINTKKLSARDFQKLEREARICRKLQHPNIV 67
Query: 91 RFYNSWIDDQNKTVN-IITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
R ++S Q ++ + ++ +L T G L + +QIL + Y HS+
Sbjct: 68 RLHDS---IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 124
Query: 150 PPIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYDEN- 205
I+HR+LK +N+ + VK+ D GLA + + A GTP +++PE+ ++
Sbjct: 125 --IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI--KPAALSKVKDPEVKSFI 263
Y++ DI++ G+ +L ++ YP + ++Y ++ +G P+ PE KS I
Sbjct: 183 YSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 241
Query: 264 EKCL-VPASQRLSAKELLMDPFL 285
+ L V +R++A + L P++
Sbjct: 242 DSMLTVNPKKRITADQALKVPWI 264
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 14/259 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G V+K + +GL +A + ++ P ++ E+ +L I+ FY
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFY 89
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
++ D ++I E GSL Q + ++ GL YL I+
Sbjct: 90 GAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 146
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
HRD+K NI +N ++GE+K+ D G++ + + A S +GT +M+PE L +Y+ +DI
Sbjct: 147 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 205
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSKVKDPEVKSFIEKCLV- 268
+S G+ ++EM YP S I++ + + P S V E + F+ KCL+
Sbjct: 206 WSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 265
Query: 269 -PASQRLSAKELLMDPFLQ 286
PA +R K+L++ F++
Sbjct: 266 NPA-ERADLKQLMVHAFIK 283
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 16/263 (6%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
KE +GKGAF V + + GLE A I+ S D ++L E + + L+H NI+
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFA--AKIINTKKLSARDFQKLEREARICRKLQHPNIV 68
Query: 91 RFYNSWIDDQNKTVN-IITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
R ++S Q ++ + ++ +L T G L + +QIL + Y HS+
Sbjct: 69 RLHDS---IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 150 PPIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYDEN- 205
I+HR+LK +N+ + VK+ D GLA + + A GTP +++PE+ ++
Sbjct: 126 --IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI--KPAALSKVKDPEVKSFI 263
Y++ DI++ G+ +L ++ YP + ++Y ++ +G P+ PE KS I
Sbjct: 184 YSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 264 EKCL-VPASQRLSAKELLMDPFL 285
+ L V +R++A + L P++
Sbjct: 243 DSMLTVNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 16/263 (6%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
KE +GKGAF V + + GLE A I+ S D ++L E + + L+H NI+
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFA--AKIINTKKLSARDFQKLEREARICRKLQHPNIV 68
Query: 91 RFYNSWIDDQNKTVN-IITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
R ++S Q ++ + ++ +L T G L + +QIL + Y HS+
Sbjct: 69 RLHDS---IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 150 PPIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYDEN- 205
I+HR+LK +N+ + VK+ D GLA + + A GTP +++PE+ ++
Sbjct: 126 --IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI--KPAALSKVKDPEVKSFI 263
Y++ DI++ G+ +L ++ YP + ++Y ++ +G P+ PE KS I
Sbjct: 184 YSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 264 EKCL-VPASQRLSAKELLMDPFL 285
+ L V +R++A + L P++
Sbjct: 243 DSMLTVNPKKRITADQALKVPWI 265
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 31/295 (10%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLK 85
+Y+R ++ IG+G+F +G + ++ I + S ++ E EV +L ++K
Sbjct: 25 KYVRLQK-IGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMK 81
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSL--RQYRXXXXXXXXXXXXGWARQILSGLI 143
H NI+++ S+ ++N ++ I+ + G L R W QI L
Sbjct: 82 HPNIVQYRESF--EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL- 138
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN--AKSVIGTPEFMAPEL 201
H HD I+HRD+K NIF+ + G V++GD G+A ++ A++ IGTP +++PE+
Sbjct: 139 -KHVHDRKILHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI 196
Query: 202 YDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD---- 256
+ YN +DI++ G + E+ T ++ + + K +S P +L D
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSL 256
Query: 257 ------------PEVKSFIEKCLVPAS-QRLSAKELLMDPF-LQVNGTTKNRPLP 297
P V S +EK + ++ + +L+ + F L+ ++P+P
Sbjct: 257 VSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIP 311
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 129/262 (49%), Gaps = 17/262 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E IGKG+F V+K D VA ++I D+ ++ +++E + E+ +L + + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVA---IKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 85
Query: 92 FYNSWIDDQNKTVNIITELFTSGS-LRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+Y S++ + + II E GS L R ++IL GL YLHS
Sbjct: 86 YYGSYL--KGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATM--LKEILKGLDYLHSEKK 141
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELYDEN-YN 207
IHRD+K N+ ++ QG+VK+ D G+A + K + +GTP +MAPE+ ++ Y+
Sbjct: 142 --IHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 208 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL 267
ADI+S G+ +E+ E P S+ ++ + P L K FI+ CL
Sbjct: 199 SKADIWSLGITAIELAKGEPPNSDMHPMRVLF--LIPKNNPPTLVGDFTKSFKEFIDACL 256
Query: 268 VP-ASQRLSAKELLMDPFLQVN 288
S R +AKELL F+ N
Sbjct: 257 NKDPSFRPTAKELLKHKFIVKN 278
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 141/286 (49%), Gaps = 21/286 (7%)
Query: 29 RYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHN 87
R + IGKG F V A + G EVA VRI D Q + L++L+ EV ++K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NI++ + + + KT+ ++ E + G + Y RQI+S + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--C 129
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-EN 205
H I+HRDLK +N+ ++ + +KI D G + N + G+P + APEL+ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 206 YN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSF 262
Y+ D++S G+ + +V+ P+ + +N ++ ++V G P +S + +K F
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKF 247
Query: 263 IEKCLVPASQRLSAKELLMDPFLQV---NGTTKNRPLPLPDIVLPR 305
+ ++ S+R + ++++ D ++ V + K PLPD PR
Sbjct: 248 L---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPR 290
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 112/251 (44%), Gaps = 15/251 (5%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+ +E+IG G F VY+AF G EVA R D + +E + E L LKH
Sbjct: 9 LTLEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NII + + N + ++ E G L + WA QI G+ YLH
Sbjct: 67 NIIALRGVCLKEPN--LCLVMEFARGGPLNRV-LSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 148 HD-PPIIHRDLKCDNIFI-----NGNQGE--VKIGDLGLATIMEQANAKSVIGTPEFMAP 199
PIIHRDLK NI I NG+ +KI D GLA + S G +MAP
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAP 183
Query: 200 ELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
E+ + +++ +D++S+G+ + E++T E P+ A Y + + S +P
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPF 243
Query: 259 VKSFIEKCLVP 269
K +E C P
Sbjct: 244 AK-LMEDCWNP 253
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 29/213 (13%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLY-SEVHLLKSLKHNN 88
+ EV+GKG F K G EV + + ++++ E+ +R + EV +++ L+H N
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETG-EV----MVMKELIRFDEETQRTFLKEVKVMRCLEHPN 68
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHS 147
+++F D K +N ITE G+LR + +A+ I SG+ YLHS
Sbjct: 69 VLKFIGVLYKD--KRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----------------EQANAKSVI 191
+ IIHRDL N + N+ V + D GLA +M ++ +V+
Sbjct: 127 MN--IIHRDLNSHNCLVRENK-NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 192 GTPEFMAPELYD-ENYNELADIYSFGMCMLEMV 223
G P +MAPE+ + +Y+E D++SFG+ + E++
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 21/286 (7%)
Query: 29 RYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHN 87
R + IGKG F V A + G EVA VRI D Q + L++L+ EV ++K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NI++ + + + KT+ ++ E + G + Y RQI+S + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--C 129
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-EN 205
H I+HRDLK +N+ ++ + +KI D G + N G+P + APEL+ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 206 YN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSF 262
Y+ D++S G+ + +V+ P+ + +N ++ ++V G P +S + +K F
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKF 247
Query: 263 IEKCLVPASQRLSAKELLMDPFLQV---NGTTKNRPLPLPDIVLPR 305
+ ++ S+R + ++++ D ++ V + K PLPD PR
Sbjct: 248 L---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPR 290
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 141/286 (49%), Gaps = 21/286 (7%)
Query: 29 RYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHN 87
R + IGKG F V A + G EVA V+I D Q + L++L+ EV ++K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NI++ + + + KT+ ++ E + G + Y RQI+S + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--C 129
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-EN 205
H I+HRDLK +N+ ++ + +KI D G + N + G+P + APEL+ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 206 YN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSF 262
Y+ D++S G+ + +V+ P+ + +N ++ ++V G P +S + +K F
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKF 247
Query: 263 IEKCLVPASQRLSAKELLMDPFLQV---NGTTKNRPLPLPDIVLPR 305
+ ++ S+R + ++++ D ++ V + K PLPD PR
Sbjct: 248 L---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVAPLPDYKDPR 290
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 124/256 (48%), Gaps = 15/256 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IGKG+F VYK D VA ++I D+ ++ +++E + E+ +L I R++
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVA---IKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
S++ ++ + II E GS R+IL GL YLHS I
Sbjct: 84 GSYL--KSTKLWIIMEYLGGGSALDLLKPGPLEETYIAT-ILREILKGLDYLHSERK--I 138
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELYDEN-YNELA 210
HRD+K N+ ++ QG+VK+ D G+A + K +GTP +MAPE+ ++ Y+ A
Sbjct: 139 HRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 211 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPA 270
DI+S G+ +E+ E P S+ ++ + P L K F+E CL
Sbjct: 198 DIWSLGITAIELAKGEPPNSDLHPMRVLF--LIPKNSPPTLEGQHSKPFKEFVEACLNKD 255
Query: 271 SQ-RLSAKELLMDPFL 285
+ R +AKELL F+
Sbjct: 256 PRFRPTAKELLKHKFI 271
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 141/286 (49%), Gaps = 21/286 (7%)
Query: 29 RYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHN 87
R + IGKG F V A + G EVA V+I D Q + L++L+ EV ++K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NI++ + + + KT+ ++ E + G + Y RQI+S + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--C 129
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-EN 205
H I+HRDLK +N+ ++ + +KI D G + N + G+P + APEL+ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 206 YN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSF 262
Y+ D++S G+ + +V+ P+ + +N ++ ++V G P +S + +K F
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKF 247
Query: 263 IEKCLVPASQRLSAKELLMDPFLQV---NGTTKNRPLPLPDIVLPR 305
+ ++ S+R + ++++ D ++ V + K PLPD PR
Sbjct: 248 L---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPR 290
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 15/270 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E +GKGAF V + + G E A + + S D ++L E + + LKH NI+R
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL--SARDHQKLEREARICRLLKHPNIVR 85
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
++S ++ + +I +L T G L + +QIL + LH H
Sbjct: 86 LHDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--LHCHQMG 141
Query: 152 IIHRDLKCDNIFING--NQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDEN-Y 206
++HRDLK +N+ + VK+ D GLA + EQ GTP +++PE+ ++ Y
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIE 264
+ D+++ G+ +L ++ YP + ++Y+++ +G P+ PE K I
Sbjct: 202 GKPVDLWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 265 KCL-VPASQRLSAKELLMDPFLQVNGTTKN 293
K L + S+R++A E L P++ T +
Sbjct: 261 KMLTINPSKRITAAEALKHPWISHRSTVAS 290
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 21/286 (7%)
Query: 29 RYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHN 87
R + IGKG F V A + G EVA V+I D Q + L++L+ EV ++K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NI++ + + + KT+ ++ E + G + Y RQI+S + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--C 129
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-EN 205
H I+HRDLK +N+ ++ + +KI D G + N + G P + APEL+ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 206 YN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSF 262
Y+ D++S G+ + +V+ P+ + +N ++ ++V G P +S + +K F
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKF 247
Query: 263 IEKCLVPASQRLSAKELLMDPFLQV---NGTTKNRPLPLPDIVLPR 305
+ ++ S+R + ++++ D ++ V + K PLPD PR
Sbjct: 248 L---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPR 290
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 15/268 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E +GKGAF V + + G E A + I+ S D ++L E + + LKH NI+R
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYA--AMIINTKKLSARDHQKLEREARICRLLKHPNIVR 74
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
++S ++ + +I +L T G L + +QIL + LH H
Sbjct: 75 LHDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--LHCHQMG 130
Query: 152 IIHRDLKCDNIFING--NQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDEN-Y 206
++HR+LK +N+ + VK+ D GLA + EQ GTP +++PE+ ++ Y
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIE 264
+ D+++ G+ +L ++ YP + ++Y+++ +G P+ PE K I
Sbjct: 191 GKPVDLWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249
Query: 265 KCL-VPASQRLSAKELLMDPFLQVNGTT 291
K L + S+R++A E L P++ T
Sbjct: 250 KMLTINPSKRITAAEALKHPWISHRSTV 277
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 141/286 (49%), Gaps = 21/286 (7%)
Query: 29 RYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHN 87
R + IGKG F V A + G EVA V+I D Q + L++L+ EV ++K L H
Sbjct: 10 RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NI++ + + + KT+ ++ E + G + Y RQI+S + Y
Sbjct: 67 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY--C 122
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-EN 205
H I+HRDLK +N+ ++ + +KI D G + N + G+P + APEL+ +
Sbjct: 123 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 206 YN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSF 262
Y+ D++S G+ + +V+ P+ + +N ++ ++V G P +S + +K F
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKF 240
Query: 263 IEKCLVPASQRLSAKELLMDPFLQV---NGTTKNRPLPLPDIVLPR 305
+ ++ S+R + ++++ D ++ V + K PLPD PR
Sbjct: 241 L---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPR 283
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 13/221 (5%)
Query: 29 RYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHN 87
R + IGKG F V A + G EVA ++I D Q +P L++L+ EV ++K L H
Sbjct: 15 RLLKTIGKGNFAKVKLARHILTGREVA---IKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NI++ + + + KT+ +I E + G + Y RQI+S + Y
Sbjct: 72 NIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY--C 127
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-IMEQANAKSVIGTPEFMAPELYD-EN 205
H I+HRDLK +N+ ++ + +KI D G + + G+P + APEL+ +
Sbjct: 128 HQKRIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 206 YN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
Y+ D++S G+ + +V+ P+ + +N ++ ++V G
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRG 226
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 127/262 (48%), Gaps = 15/262 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E IGKGAF V + G E A I+ S D ++L E + + LKH+NI+R
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYA--AKIINTKKLSARDHQKLEREARICRLLKHSNIVR 67
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
++S I ++ ++ +L T G L + +QIL + LH H
Sbjct: 68 LHDS-ISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--LHCHQMG 123
Query: 152 IIHRDLKCDNIFI--NGNQGEVKIGDLGLATIME--QANAKSVIGTPEFMAPE-LYDENY 206
++HRDLK +N+ + VK+ D GLA ++ Q GTP +++PE L E Y
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIE 264
+ DI++ G+ +L ++ YP + ++Y+++ +G P+ PE K+ I
Sbjct: 184 GKPVDIWACGV-ILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 242
Query: 265 KCL-VPASQRLSAKELLMDPFL 285
+ L + ++R++A E L P++
Sbjct: 243 QMLTINPAKRITAHEALKHPWV 264
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 18/272 (6%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
+E +G+G+F V A +VA + +L+ + R+ E+ LK L+H +II
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFIS-RQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ Y+ I V +I + G L Y + +QI+ + Y H H
Sbjct: 73 KLYDV-ITTPTDIVMVIE--YAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK- 128
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--N 207
I+HRDLK +N+ ++ N VKI D GL+ IM N K+ G+P + APE+ +
Sbjct: 129 -IVHRDLKPENLLLDDNLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAG 186
Query: 208 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--IKPAALSKVKDPEVKSFIEK 265
D++S G+ + M+ P+ + ++KKV+S + P LS P +S I +
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFDD-EFIPNLFKKVNSCVYVMPDFLS----PGAQSLIRR 241
Query: 266 CLVP-ASQRLSAKELLMDPFLQVNGTTKNRPL 296
+V QR++ +E+ DP+ VN RP+
Sbjct: 242 MIVADPMQRITIQEIRRDPWFNVNLPDYLRPM 273
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 13/221 (5%)
Query: 29 RYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHN 87
R + IGKG F V A + G EVA ++I D Q +P L++L+ EV ++K L H
Sbjct: 18 RLLKTIGKGNFAKVKLARHILTGREVA---IKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NI++ + + + KT+ +I E + G + Y RQI+S + Y
Sbjct: 75 NIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY--C 130
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-IMEQANAKSVIGTPEFMAPELYD-EN 205
H I+HRDLK +N+ ++ + +KI D G + + G P + APEL+ +
Sbjct: 131 HQKRIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 206 YN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
Y+ D++S G+ + +V+ P+ + +N ++ ++V G
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRG 229
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 73
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 74 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 189 V--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 73
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 74 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 189 V--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 73
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 74 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 189 V--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 124/264 (46%), Gaps = 18/264 (6%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G V+K + +GL +A + ++ P ++ E+ +L I+ FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
++ D ++I E GSL Q + ++ GL YL I+
Sbjct: 71 GAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
HRD+K NI +N ++GE+K+ D G++ + + A S +GT +M+PE L +Y+ +DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 213 YSFGMCMLEMVTFEYPY------SECRNSAQIYKKVSSGIK---PAALSKVKDPEVKSFI 263
+S G+ ++EM YP + R I++ + + P S V E + F+
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 246
Query: 264 EKCLVP-ASQRLSAKELLMDPFLQ 286
KCL+ ++R K+L++ F++
Sbjct: 247 NKCLIKNPAERADLKQLMVHAFIK 270
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 132/271 (48%), Gaps = 29/271 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWC-----QVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GLE A Q R S E++ER EV +L+ + H
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER---EVSILRQVLH 74
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
+N+I ++ + +N+T V +I EL + G L + + +QIL G+ YL
Sbjct: 75 HNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQ-ANAKSVIGTPEFMAPEL 201
H+ I H DLK +NI + N +K+ D GLA +E K++ GTPEF+APE+
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSSGIKPAALSKVK 255
NY L AD++S G+ +++ P+ ++ A I VS S+
Sbjct: 190 V--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTS 246
Query: 256 DPEVKSFIEKCLVPAS-QRLSAKELLMDPFL 285
+ K FI K LV + +RL+ +E L P++
Sbjct: 247 EL-AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 73
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 74 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 189 V--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 73
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 74 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 189 V--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 73
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 74 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 189 V--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 72
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 73 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 129
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 130 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 187
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 188 V--NYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 72
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 73 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 129
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 130 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 187
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 188 V--NYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 35/282 (12%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
+EVIG GA V A+ +VA ++ ++ S ++ L E+ + H NI+
Sbjct: 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS---MDELLKEIQAMSQCHHPNIV 76
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSL--------RQYRXXXXXXXXXXXXGWARQILSGL 142
+Y S++ + ++ +L + GS+ + R++L GL
Sbjct: 77 SYYTSFVVKDE--LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-------AKSVIGTPE 195
YLH + IHRD+K NI + G G V+I D G++ + K+ +GTP
Sbjct: 135 EYLHKNGQ--IHRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 196 FMAPELYDE--NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSK 253
+MAPE+ ++ Y+ ADI+SFG+ +E+ T PY + ++ P+ +
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK-YPPMKVLMLTLQNDPPSLETG 250
Query: 254 VKDPEV-----KSF---IEKCLVP-ASQRLSAKELLMDPFLQ 286
V+D E+ KSF I CL +R +A ELL F Q
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E +G G + TVYK ++ G+ VA +V++D +P R E+ L+K LKH NI+R
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR---EISLMKELKHENIVR 67
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX------XXXXGWARQILSGLIYL 145
Y+ I +NK + ++ E F L++Y + Q+L GL +
Sbjct: 68 LYDV-IHTENK-LTLVFE-FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI--MEQANAKSVIGTPEFMAPELY- 202
H + I+HRDLK N+ IN +G++K+GD GLA + S + T + AP++
Sbjct: 125 HENK--ILHRDLKPQNLLIN-KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLM 181
Query: 203 -DENYNELADIYSFGMCMLEMVT 224
Y+ DI+S G + EM+T
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMIT 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 23/277 (8%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+G+F V A+ G +VA ++ VL + R+ E+ L+ L+H +II+
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVA-LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Y+ I +++ + +I + L Y + +QI+S + Y H H
Sbjct: 73 LYDV-IKSKDEIIMVIE--YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK-- 127
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NE 208
I+HRDLK +N+ ++ VKI D GL+ IM N K+ G+P + APE+
Sbjct: 128 IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 186
Query: 209 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL- 267
D++S G+ + M+ P+ + + ++K +S+G+ L K P I++ L
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLI 243
Query: 268 VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLP 304
V R+S E++ D + +V+ LP+ +LP
Sbjct: 244 VNPLNRISIHEIMQDDWFKVD---------LPEYLLP 271
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 73
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 74 PNVITLHEVY---ENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 189 V--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 73
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 74 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 189 V--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 23/277 (8%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+G+F V A+ G +VA ++ VL + R+ E+ L+ L+H +II+
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVA-LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Y+ I +++ + +I + L Y + +QI+S + Y H H
Sbjct: 69 LYDV-IKSKDEIIMVIE--YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK-- 123
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NE 208
I+HRDLK +N+ ++ VKI D GL+ IM N K+ G+P + APE+
Sbjct: 124 IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 182
Query: 209 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL- 267
D++S G+ + M+ P+ + + ++K +S+G+ L K P I++ L
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLI 239
Query: 268 VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLP 304
V R+S E++ D + +V+ LP+ +LP
Sbjct: 240 VNPLNRISIHEIMQDDWFKVD---------LPEYLLP 267
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 35/282 (12%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
+EVIG GA V A+ +VA ++ ++ S ++ L E+ + H NI+
Sbjct: 15 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS---MDELLKEIQAMSQCHHPNIV 71
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSL--------RQYRXXXXXXXXXXXXGWARQILSGL 142
+Y S++ + ++ +L + GS+ + R++L GL
Sbjct: 72 SYYTSFVVKDE--LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-------AKSVIGTPE 195
YLH + IHRD+K NI + G G V+I D G++ + K+ +GTP
Sbjct: 130 EYLHKNGQ--IHRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 196 FMAPELYDE--NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSK 253
+MAPE+ ++ Y+ ADI+SFG+ +E+ T PY + ++ P+ +
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK-YPPMKVLMLTLQNDPPSLETG 245
Query: 254 VKDPEV-----KSF---IEKCLVP-ASQRLSAKELLMDPFLQ 286
V+D E+ KSF I CL +R +A ELL F Q
Sbjct: 246 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 132/271 (48%), Gaps = 29/271 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWC-----QVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GLE A Q R S E++ER EV +L+ + H
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER---EVSILRQVLH 74
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
+N+I ++ + +N+T V +I EL + G L + + +QIL G+ YL
Sbjct: 75 HNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQ-ANAKSVIGTPEFMAPEL 201
H+ I H DLK +NI + N +K+ D GLA +E K++ GTPEF+APE+
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSSGIKPAALSKVK 255
NY L AD++S G+ +++ P+ ++ A I VS S+
Sbjct: 190 V--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTS 246
Query: 256 DPEVKSFIEKCLVPAS-QRLSAKELLMDPFL 285
+ K FI K LV + +RL+ +E L P++
Sbjct: 247 EL-AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 73
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 74 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 189 V--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 29/271 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWC-----QVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GLE A Q R S E++ER EV +L+ + H
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER---EVSILRQVLH 74
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
+N+I ++ + +N+T V +I EL + G L + + +QIL G+ YL
Sbjct: 75 HNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQA-NAKSVIGTPEFMAPEL 201
H+ I H DLK +NI + N +K+ D GLA +E K++ GTPEF+APE+
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSSGIKPAALSKVK 255
NY L AD++S G+ +++ P+ ++ A I VS S
Sbjct: 190 V--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTS 246
Query: 256 DPEVKSFIEKCLVPAS-QRLSAKELLMDPFL 285
+ K FI K LV + +RL+ +E L P++
Sbjct: 247 EL-AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 73
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 74 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF+APE+
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 189 V--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 29/271 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWC-----QVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GLE A Q R S E++ER EV +L+ + H
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER---EVSILRQVLH 74
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
+N+I ++ + +N+T V +I EL + G L + + +QIL G+ YL
Sbjct: 75 HNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQ-ANAKSVIGTPEFMAPEL 201
H+ I H DLK +NI + N +K+ D GLA +E K++ GTPEF+APE+
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSSGIKPAALSKVK 255
NY L AD++S G+ +++ P+ ++ A I VS S
Sbjct: 190 V--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTS 246
Query: 256 DPEVKSFIEKCLVPAS-QRLSAKELLMDPFL 285
+ K FI K LV + +RL+ +E L P++
Sbjct: 247 EL-AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 27 YIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLL 81
Y E +G G F V K ++ GL+ A ++ S ED+ER EV +L
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSIL 68
Query: 82 KSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILS 140
K ++H N+I + + +NKT V +I EL G L + + +QIL+
Sbjct: 69 KEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 141 GLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEF 196
G+ YLHS I H DLK +NI + N + +KI D GLA ++ N K++ GTPEF
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 197 MAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
+APE+ NY L AD++S G+ +++ P+
Sbjct: 184 VAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 29/271 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWC-----QVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GLE A Q R S E++ER EV +L+ + H
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER---EVSILRQVLH 74
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
+N+I ++ + +N+T V +I EL + G L + + +QIL G+ YL
Sbjct: 75 HNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQ-ANAKSVIGTPEFMAPEL 201
H+ I H DLK +NI + N +K+ D GLA +E K++ GTPEF+APE+
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSSGIKPAALSKVK 255
NY L AD++S G+ +++ P+ ++ A I VS S
Sbjct: 190 V--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTS 246
Query: 256 DPEVKSFIEKCLVPAS-QRLSAKELLMDPFL 285
+ K FI K LV + +RL+ +E L P++
Sbjct: 247 EL-AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 22/230 (9%)
Query: 7 GAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRID 62
GA E DP E R++++ + +GKG F +V Y + G VA +++
Sbjct: 1 GAMAFEDRDPTQFEE----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-- 54
Query: 63 DVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RX 121
+ E L E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 55 --HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK 112
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+ QI G+ YL + IHRDL NI + N+ VKIGD GL +
Sbjct: 113 HKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKV 169
Query: 182 MEQANAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
+ Q + P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 170 LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 219
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 18/258 (6%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL-KHNNIIRF 92
+G G++ V+K + +G A R + P+D R +EV + + +H +R
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYA--VKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
+W ++ + + TEL SL+Q+ G+ R L L +LHS
Sbjct: 123 EQAW--EEGGILYLQTEL-CGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG-- 177
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI-GTPEFMAPELYDENYNELA 210
++H D+K NIF+ G +G K+GD GL + A A V G P +MAPEL +Y A
Sbjct: 178 LVHLDVKPANIFL-GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAA 236
Query: 211 DIYSFGMCMLEMVT-FEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP 269
D++S G+ +LE+ E P+ + ++++ G P + E++S + L P
Sbjct: 237 DVFSLGLTILEVACNMELPH-----GGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEP 291
Query: 270 ASQ-RLSAKELLMDPFLQ 286
+ R +A+ LL P L+
Sbjct: 292 DPKLRATAEALLALPVLR 309
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 16/258 (6%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G V+K + +GL +A + ++ P ++ E+ +L I+ FY
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 73
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
++ D ++I E GSL Q + ++ GL YL I+
Sbjct: 74 GAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 130
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
HRD+K NI +N ++GE+K+ D G++ + A +GT +M+PE L +Y+ +DI
Sbjct: 131 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDI 189
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSKVKDPEVKSFIEKCLVP 269
+S G+ ++EM YP R I++ + + P S V E + F+ KCL+
Sbjct: 190 WSMGLSLVEMAVGRYP----RPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIK 245
Query: 270 -ASQRLSAKELLMDPFLQ 286
++R K+L++ F++
Sbjct: 246 NPAERADLKQLMVHAFIK 263
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 14/261 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+G+F V A+ G +VA ++ VL + R+ E+ L+ L+H +II+
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVA-LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Y+ I +++ + +I + L Y + +QI+S + Y H H
Sbjct: 79 LYDV-IKSKDEIIMVIE--YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK-- 133
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NE 208
I+HRDLK +N+ ++ VKI D GL+ IM N K+ G+P + APE+
Sbjct: 134 IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 192
Query: 209 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL- 267
D++S G+ + M+ P+ + + ++K +S+G+ L K P I++ L
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLI 249
Query: 268 VPASQRLSAKELLMDPFLQVN 288
V R+S E++ D + +V+
Sbjct: 250 VNPLNRISIHEIMQDDWFKVD 270
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 35/276 (12%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-------SPEDLERLYSEVHLLKSL 84
EVIGKGAF V + + G + A V+I DV + S EDL+R S H+LK
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFA---VKIVDVAKFTSSPGLSTEDLKREASICHMLK-- 84
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSL----RQYRXXXXXXXXXXXXGWARQILS 140
H +I+ ++ D + ++ E L + + RQIL
Sbjct: 85 -HPHIVELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 141 GLIYLHSHDPPIIHRDLKCDNIFING--NQGEVKIGDLGLATIMEQAN--AKSVIGTPEF 196
L Y HD IIHRD+K +N+ + N VK+GD G+A + ++ A +GTP F
Sbjct: 142 ALRY--CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHF 199
Query: 197 MAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG---IKPAALS 252
MAPE+ E Y + D++ G+ + +++ P+ + ++++ + G + P S
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWS 257
Query: 253 KVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQ 286
+ + K + + L+ PA +R++ E L P+L+
Sbjct: 258 HISE-SAKDLVRRMLMLDPA-ERITVYEALNHPWLK 291
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 29 RYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHN 87
R + IGKG F V A + G EVA V+I D Q + L++L+ EV + K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NI++ + + + KT+ ++ E + G + Y RQI+S + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY--C 129
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-EN 205
H I+HRDLK +N+ ++ + +KI D G + N + G P + APEL+ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADXN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 206 YN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPE--VKSF 262
Y+ D++S G+ + +V+ P+ + +N ++ ++V G D E +K F
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYXSTDCENLLKKF 247
Query: 263 IEKCLVPASQRLSAKELLMDPFLQV---NGTTKNRPLPLPDIVLPR 305
+ ++ S+R + +++ D + V + K PLPD PR
Sbjct: 248 L---ILNPSKRGTLEQIXKDRWXNVGHEDDELKPYVEPLPDYKDPR 290
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 14/261 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+G+F V A+ G +VA ++ VL + R+ E+ L+ L+H +II+
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVA-LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Y+ I +++ + +I + L Y + +QI+S + Y H H
Sbjct: 78 LYDV-IKSKDEIIMVIE--YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK-- 132
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NE 208
I+HRDLK +N+ ++ VKI D GL+ IM N K+ G+P + APE+
Sbjct: 133 IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 191
Query: 209 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL- 267
D++S G+ + M+ P+ + + ++K +S+G+ L K P I++ L
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLI 248
Query: 268 VPASQRLSAKELLMDPFLQVN 288
V R+S E++ D + +V+
Sbjct: 249 VNPLNRISIHEIMQDDWFKVD 269
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 23/211 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-----EDLERLYSEVHLLKSLKH 86
E +G G F V K ++ GL+ A ++ S ED+ER EV +LK ++H
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQH 73
Query: 87 NNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
N+I + + +NKT V +I EL G L + + +QIL+G+ YL
Sbjct: 74 PNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 146 HSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPEL 201
HS I H DLK +NI + N + +KI D GLA ++ N K++ GTP F+APE+
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEI 188
Query: 202 YDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 189 V--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDL--ERLYSEVHLLKSLKHNNI 89
E +G G F V K ++ GLE A ++ S + E + EV +L+ + H NI
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 90 IRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
I ++ + +N+T V +I EL + G L + + +QIL G+ YLH+
Sbjct: 78 ITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT- 133
Query: 149 DPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQ-ANAKSVIGTPEFMAPELYDE 204
I H DLK +NI + N +K+ D GLA +E K++ GTPEF+APE+
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-- 190
Query: 205 NYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSSGIKPAALSKVKDPE 258
NY L AD++S G+ +++ P+ ++ A I VS S+ +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSEL- 248
Query: 259 VKSFIEKCLVPAS-QRLSAKELLMDPFL 285
K FI K LV + +RL+ +E L P++
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 15/262 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E +GKGAF V + + E A + + S D ++L E + + LKH NI+R
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL--SARDHQKLEREARICRLLKHPNIVR 94
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
++S I ++ ++ +L T G L + QIL + ++H HD
Sbjct: 95 LHDS-ISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD-- 150
Query: 152 IIHRDLKCDNIFING--NQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDEN-Y 206
I+HRDLK +N+ + VK+ D GLA + EQ GTP +++PE+ ++ Y
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIE 264
+ DI++ G+ +L ++ YP + ++Y+++ +G P+ PE K+ I
Sbjct: 211 GKPVDIWACGV-ILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 269
Query: 265 KCL-VPASQRLSAKELLMDPFL 285
+ L + ++R++A + L P++
Sbjct: 270 QMLTINPAKRITADQALKHPWV 291
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 22 DPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL 74
DPT R++++ +GKG F +V Y + G VA +++ + E L
Sbjct: 6 DPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDF 61
Query: 75 YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXG 133
E+ +LKSL+H+NI+++ + + +I E GSLR+Y +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ 121
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 122 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 194 PE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
+K +G GAF V+ + +GLE + D +S +E++ +E+ +LKSL H NI
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKD---RSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA----RQILSGLIYL 145
I+ + + D N + I+ E G L + G+ +Q+++ L Y
Sbjct: 83 IKIFEVFEDYHN--MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 146 HSHDPPIIHRDLKCDNIFINGN--QGEVKIGDLGLATIMEQ-ANAKSVIGTPEFMAPELY 202
HS ++H+DLK +NI +KI D GLA + + ++ + GT +MAPE++
Sbjct: 141 HSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF 198
Query: 203 DENYNELADIYSFGMCMLEMVTFEYPYS 230
+ DI+S G+ M ++T P++
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLPFT 226
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 21 TDPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
+DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 2 SDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRD 57
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXX 132
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 133 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 192
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 118 QYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 193 TPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER--LYSEVHLLKSLKHNNI 89
E +G G F V K + G E A ++ + S + R + EV++L+ ++H NI
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 90 IRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
I ++ + +NKT V +I EL + G L + + +QIL G+ YLHS
Sbjct: 92 ITLHDIF---ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS- 147
Query: 149 DPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYDE 204
I H DLK +NI + N +K+ D G+A +E N K++ GTPEF+APE+
Sbjct: 148 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV-- 204
Query: 205 NYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 22 DPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL 74
DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 34 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDF 89
Query: 75 YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXG 133
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 90 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 149
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 150 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 206
Query: 194 PE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 207 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 244
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 22 DPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL 74
DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 10 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDF 65
Query: 75 YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXG 133
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 125
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 126 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 182
Query: 194 PE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 183 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 220
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 22 DPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL 74
DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDF 61
Query: 75 YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXG 133
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 121
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 122 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 194 PE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER--LYSEVHLLKSLKHNNI 89
E +G G F V K + G E A ++ + S + R + EV++L+ ++H NI
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 90 IRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
I ++ + +NKT V +I EL + G L + + +QIL G+ YLHS
Sbjct: 71 ITLHDIF---ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS- 126
Query: 149 DPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYDE 204
I H DLK +NI + N +K+ D G+A +E N K++ GTPEF+APE+
Sbjct: 127 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV-- 183
Query: 205 NYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 22 DPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL 74
DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 7 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDF 62
Query: 75 YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXG 133
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 63 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 122
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 123 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 179
Query: 194 PE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 180 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 217
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 22 DPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL 74
DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDF 61
Query: 75 YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXG 133
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ 121
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 122 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 194 PE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER--LYSEVHLLKSLKHNNI 89
E +G G F V K + G E A ++ + S + R + EV++L+ ++H NI
Sbjct: 18 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 90 IRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
I ++ + +NKT V +I EL + G L + + +QIL G+ YLHS
Sbjct: 78 ITLHDIF---ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS- 133
Query: 149 DPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYDE 204
I H DLK +NI + N +K+ D G+A +E N K++ GTPEF+APE+
Sbjct: 134 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV-- 190
Query: 205 NYNEL---ADIYSFGMCMLEMVTFEYPY 229
NY L AD++S G+ +++ P+
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 22 DPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL 74
DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 8 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDF 63
Query: 75 YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXG 133
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 123
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 124 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 180
Query: 194 PE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 181 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 22 DPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL 74
DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDF 57
Query: 75 YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXG 133
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 117
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 118 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 174
Query: 194 PE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 175 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 22 DPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL 74
DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDF 56
Query: 75 YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXG 133
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 57 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 116
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 117 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 173
Query: 194 PE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 174 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 22 DPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL 74
DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDF 58
Query: 75 YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXG 133
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 119 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 194 PE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDX-ELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 199
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 259 VKSFIE 264
+++I+
Sbjct: 260 ARNYIQ 265
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNED-SELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 196
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 259 VKSFIE 264
+++I+
Sbjct: 257 ARNYIQ 262
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 26 RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLL 81
R++++ + +GKG F +V Y + G VA +++ + E L E+ +L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 83
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILS 140
KSL+H+NI+++ + + +I E GSLR Y + + QI
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 141 GLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE----- 195
G+ YL + IHRDL NI + N+ VKIGD GL ++ Q + P
Sbjct: 144 GMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
+ APE L + ++ +D++SFG+ + E+ T+
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTY 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-- 200
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 201 LYDENYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
L +YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSKPFQSIIHAKRTYRELRLLKHMKH 92
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 206
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 259 VKSFIE 264
+++I+
Sbjct: 267 ARNYIQ 272
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 26 RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLL 81
R++++ + +GKG F +V Y + G VA +++ + E L E+ +L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEIL 83
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILS 140
KSL+H+NI+++ + + +I E GSLR Y + + QI
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 141 GLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE----- 195
G+ YL + IHRDL NI + N+ VKIGD GL ++ Q + P
Sbjct: 144 GMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
+ APE L + ++ +D++SFG+ + E+ T+
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTY 231
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNED-SELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 200
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 259 VKSFIE 264
+++I+
Sbjct: 261 ARNYIQ 266
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 21 TDPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
+DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 2 SDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRD 57
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXX 132
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 133 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 192
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q +
Sbjct: 118 QYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEFFKVK 174
Query: 193 TPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDX-ELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNEDX-ELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 205
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 259 VKSFIE 264
+++I+
Sbjct: 266 ARNYIQ 271
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 12/259 (4%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+ +VIGKG+F V A + + A ++ +L+ E+ + LLK++KH
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ + S+ + + + G L + +A +I S L YLHS
Sbjct: 100 FLVGLHFSF--QTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS 157
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPE-LYDE 204
+ I++RDLK +NI ++ +QG + + D GL I + + GTPE++APE L+ +
Sbjct: 158 LN--IVYRDLKPENILLD-SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 205 NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 264
Y+ D + G + EM+ + P RN+A++Y + + KP L + +E
Sbjct: 215 PYDRTVDWWCLGAVLYEML-YGLPPFYSRNTAEMYDNILN--KPLQLKPNITNSARHLLE 271
Query: 265 KCLVP-ASQRLSAKELLMD 282
L ++RL AK+ M+
Sbjct: 272 GLLQKDRTKRLGAKDDFME 290
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 214
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 259 VKSFIE 264
+++I+
Sbjct: 275 ARNYIQ 280
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 213
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 259 VKSFIE 264
+++I+
Sbjct: 274 ARNYIQ 279
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 206
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 259 VKSFIE 264
+++I+
Sbjct: 267 ARNYIQ 272
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 217
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 259 VKSFIE 264
+++I+
Sbjct: 278 ARNYIQ 283
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 206
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 259 VKSFIE 264
+++I+
Sbjct: 267 ARNYIQ 272
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 196
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 259 VKSFIE 264
+++I+
Sbjct: 257 ARNYIQ 262
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 18/245 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V ++D +GL++A ++ QS +R Y E+ LLK +KH
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 109
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 167
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 168 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 223
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN DI+S G M E++T +P ++ N Q +++ + +S++ E
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHE 283
Query: 259 VKSFI 263
+++I
Sbjct: 284 ARNYI 288
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 205
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 259 VKSFIE 264
+++I+
Sbjct: 266 ARNYIQ 271
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 196
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 259 VKSFIE 264
+++I+
Sbjct: 257 ARNYIQ 262
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDX-ELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 199
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 259 VKSFIE 264
+++I+
Sbjct: 260 ARNYIQ 265
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 199
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 259 VKSFIE 264
+++I+
Sbjct: 260 ARNYIQ 265
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 200
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 259 VKSFIE 264
+++I+
Sbjct: 261 ARNYIQ 266
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 79
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 137
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 138 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 193
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 194 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 253
Query: 259 VKSFIE 264
+++I+
Sbjct: 254 ARNYIQ 259
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 200
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 259 VKSFIE 264
+++I+
Sbjct: 261 ARNYIQ 266
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F S L+++ + Q+L GL + HSH
Sbjct: 69 KLLDV-IHTENKLYLVFE--FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK +N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 126 R--VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMXGYVATRWYRAPEIM 217
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 259 VKSFIE 264
+++I+
Sbjct: 278 ARNYIQ 283
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F S L+++ + Q+L GL + HSH
Sbjct: 67 KLLDV-IHTENKLYLVFE--FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK +N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 124 R--VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 196
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 259 VKSFIE 264
+++I+
Sbjct: 257 ARNYIQ 262
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGXVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 201
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 259 VKSFIE 264
+++I+
Sbjct: 262 ARNYIQ 267
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 78
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 136
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 137 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 192
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 252
Query: 259 VKSFIE 264
+++I+
Sbjct: 253 ARNYIQ 258
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 191
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 259 VKSFIE 264
+++I+
Sbjct: 252 ARNYIQ 257
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 199
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 259 VKSFIE 264
+++I+
Sbjct: 260 ARNYIQ 265
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 191
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 259 VKSFIE 264
+++I+
Sbjct: 252 ARNYIQ 257
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 190
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 259 VKSFIE 264
+++I+
Sbjct: 251 ARNYIQ 256
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 123/300 (41%), Gaps = 45/300 (15%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYK-----------------------EVIGKGA 38
E EDG+A EPP P E T + K E IG GA
Sbjct: 10 EDGEDGSA--EPPGPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGA 67
Query: 39 FKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYN---- 94
+ V A + G +VA +I + + +R E+ +LK KH+NII +
Sbjct: 68 YGVVSSARRRLTGQQVAI--KKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRP 125
Query: 95 SWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIH 154
+ + K+V ++ +L S L Q + Q+L GL Y+HS +IH
Sbjct: 126 TVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIH 182
Query: 155 RDLKCDNIFINGNQGEVKIGDLGLATIM------EQANAKSVIGTPEFMAPELY--DENY 206
RDLK N+ +N N E+KIGD G+A + Q + T + APEL Y
Sbjct: 183 RDLKPSNLLVNEN-CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEY 241
Query: 207 NELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 264
+ D++S G EM+ +P + Q+ V PA + V V+++I+
Sbjct: 242 TQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQ 301
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 15/262 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E +GKGAF V + G E A + + S D ++L E + + LKH NI+R
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL--SARDHQKLEREARICRLLKHPNIVR 67
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
++S I ++ ++ +L T G L + +QIL + H H
Sbjct: 68 LHDS-ISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN--HCHLNG 123
Query: 152 IIHRDLKCDNIFINGNQ--GEVKIGDLGLATIME--QANAKSVIGTPEFMAPE-LYDENY 206
I+HRDLK +N+ + VK+ D GLA ++ Q GTP +++PE L + Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIE 264
+ D+++ G+ +L ++ YP + ++Y+++ +G P+ PE K I
Sbjct: 184 GKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 265 KCL-VPASQRLSAKELLMDPFL 285
K L + ++R++A E L P++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GL + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-SELKILDFGLCRHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 11/259 (4%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A + + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILA-LKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR--VI 134
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 135 HRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-AS 271
+S G+ E + P+ E + Y+++S + I + L AS
Sbjct: 194 WSLGVLCYEFLVGMPPF-EAHTYQETYRRISR--VEFTFPDFVTEGARDLISRLLKHNAS 250
Query: 272 QRLSAKELLMDPFLQVNGT 290
QRL+ E+L P+++ N +
Sbjct: 251 QRLTLAEVLEHPWIKANSS 269
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + T + APE+
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLAR-HTADEMTGYVATRWYRAPEIM 201
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 259 VKSFIE 264
+++I+
Sbjct: 262 ARNYIQ 267
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + T + APE+
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLAR-HTADEMTGYVATRWYRAPEIM 201
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 259 VKSFIE 264
+++I+
Sbjct: 262 ARNYIQ 267
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 24/278 (8%)
Query: 27 YIRY--KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYS----EVHL 80
Y +Y K+VIG+G V + G E A + + SPE LE + E H+
Sbjct: 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHI 152
Query: 81 LKSLK-HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 139
L+ + H +II +S+ + + + ++ +L G L Y R +L
Sbjct: 153 LRQVAGHPHIITLIDSY--ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLL 210
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA-NAKSVIGTPEFMA 198
+ +LH+++ I+HRDLK +NI ++ N ++++ D G + +E + + GTP ++A
Sbjct: 211 EAVSFLHANN--IVHRDLKPENILLDDNM-QIRLSDFGFSCHLEPGEKLRELCGTPGYLA 267
Query: 199 PELY----DEN---YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAAL 251
PE+ DE Y + D+++ G+ + ++ P+ R + + + G +
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH-RRQILMLRMIMEGQYQFSS 326
Query: 252 SKVKD--PEVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
+ D VK I + L V RL+A++ L PF +
Sbjct: 327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 11/259 (4%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A + + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILA-LKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR--VI 134
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 135 HRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-AS 271
+S G+ E + P+ E + Y+++S + I + L AS
Sbjct: 194 WSLGVLCYEFLVGMPPF-EAHTYQETYRRISR--VEFTFPDFVTEGARDLISRLLKHNAS 250
Query: 272 QRLSAKELLMDPFLQVNGT 290
QRL+ E+L P+++ N +
Sbjct: 251 QRLTLAEVLEHPWIKANSS 269
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDYGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + T + APE+
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLAR-HTADEMTGYVATRWYRAPEIM 201
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 259 VKSFIE 264
+++I+
Sbjct: 262 ARNYIQ 267
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDAGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 123/300 (41%), Gaps = 45/300 (15%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYK-----------------------EVIGKGA 38
E EDG+A EPP P E T + K E IG GA
Sbjct: 9 EDGEDGSA--EPPGPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGA 66
Query: 39 FKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYN---- 94
+ V A + G +VA +I + + +R E+ +LK KH+NII +
Sbjct: 67 YGVVSSARRRLTGQQVAIK--KIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRP 124
Query: 95 SWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIH 154
+ + K+V ++ +L S L Q + Q+L GL Y+HS +IH
Sbjct: 125 TVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIH 181
Query: 155 RDLKCDNIFINGNQGEVKIGDLGLATIM------EQANAKSVIGTPEFMAPELY--DENY 206
RDLK N+ +N N E+KIGD G+A + Q + T + APEL Y
Sbjct: 182 RDLKPSNLLVNEN-CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEY 240
Query: 207 NELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 264
+ D++S G EM+ +P + Q+ V PA + V V+++I+
Sbjct: 241 TQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQ 300
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 15/262 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E +GKGAF V + G E A + + S D ++L E + + LKH NI+R
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL--SARDHQKLEREARICRLLKHPNIVR 67
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
++S I ++ ++ +L T G L + +QIL + H H
Sbjct: 68 LHDS-ISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN--HCHLNG 123
Query: 152 IIHRDLKCDNIFINGNQ--GEVKIGDLGLATIME--QANAKSVIGTPEFMAPE-LYDENY 206
I+HRDLK +N+ + VK+ D GLA ++ Q GTP +++PE L + Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIE 264
+ D+++ G+ +L ++ YP + ++Y+++ +G P+ PE K I
Sbjct: 184 GKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 265 KCL-VPASQRLSAKELLMDPFL 285
K L + ++R++A E L P++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDRGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 72
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 73 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYD 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE L
Sbjct: 130 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGX 185
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G V+K + +GL +A + ++ P ++ E+ +L I+ FY
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 132
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
++ D ++I E GSL Q + ++ GL YL I+
Sbjct: 133 GAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 189
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
HRD+K NI +N ++GE+K+ D G++ + + A S +GT +M+PE L +Y+ +DI
Sbjct: 190 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 248
Query: 213 YSFGMCMLEMVTFEYP 228
+S G+ ++EM YP
Sbjct: 249 WSMGLSLVEMAVGRYP 264
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 135
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 70 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 126
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 192
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 127 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 184
Query: 193 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 245
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 244
Query: 246 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 286
P ++V + + + +V R + +E L P+LQ
Sbjct: 245 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 22 DPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL 74
DPT R++++ + +GKG F +V Y + G VA +++ + E L
Sbjct: 4 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDF 59
Query: 75 YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXG 133
E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 60 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 119
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
+ QI G+ YL + IHR+L NI + N+ VKIGD GL ++ Q +
Sbjct: 120 YTSQICKGMEYLGTKR--YIHRNLATRNILVE-NENRVKIGDFGLTKVLPQDKEYYKVKE 176
Query: 194 PE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 177 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 135
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 64 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 192
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 193 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 245
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 246 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 286
P ++V + + + +V R + +E L P+LQ
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 135
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 64 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 192
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 193 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 245
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 246 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 286
P ++V + + + +V R + +E L P+LQ
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 66 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELY--D 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGX 178
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 68 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK +N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 125 R--VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 135
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 63 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 119
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 192
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 120 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 177
Query: 193 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 245
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 237
Query: 246 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 286
P ++V + + + +V R + +E L P+LQ
Sbjct: 238 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 39/228 (17%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+G F V++A ++V+ A ++R+ + + E + R EV L L+H I+R
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMR---EVKALAKLEHPGIVR 67
Query: 92 FYNSWIDDQNKT-----------VNIITELFTSGSLRQY---RXXXXXXXXXXXXGWARQ 137
++N+W++ +N T + I +L +L+ + R Q
Sbjct: 68 YFNAWLE-KNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 138 ILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ------------- 184
I + +LHS ++HRDLK NIF + VK+GD GL T M+Q
Sbjct: 127 IAEAVEFLHSKG--LMHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 185 -ANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYS 230
A +GT +M+PE ++ +Y+ DI+S G+ + E++ YP+S
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFS 228
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + A + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 68 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 123
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 124 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F S L+ + + Q+L GL + HSH
Sbjct: 68 KLLDV-IHTENKLYLVFE--FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 125 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F S L+ + + Q+L GL + HSH
Sbjct: 69 KLLDV-IHTENKLYLVFE--FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 126 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + A + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 141/309 (45%), Gaps = 51/309 (16%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 69
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 70 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 127 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 182
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPL 296
P+ SKV P + +S + + L ++R+SAK L PF Q TK
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ--DVTK---- 296
Query: 297 PLPDIVLPR 305
P+P + L R
Sbjct: 297 PVPHLRLER 305
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 135
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 64 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 192
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 193 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 245
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 246 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 286
P ++V + + + +V R + +E L P+LQ
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 67 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK +N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 124 R--VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + A + T + APE+
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIM 190
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 259 VKSFIE 264
+++I+
Sbjct: 251 ARNYIQ 256
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 66 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 65 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 122 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 177
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDGGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEY 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 67 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 124 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 179
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 135
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 189 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 245
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 192
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 246 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 303
Query: 193 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 245
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363
Query: 246 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 286
P ++V + + + +V R + +E L P+LQ
Sbjct: 364 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 69 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 126 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 26/251 (10%)
Query: 15 DPDVLETDPTCRYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPED 70
DP + E R+++Y +GKG F +V Y + G VA + + S D
Sbjct: 3 DPTIFEE----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVA-----VKQLQHSGPD 53
Query: 71 LERLYS-EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXX 128
+R + E+ +LK+L + I+++ +++ ++ E SG LR + +
Sbjct: 54 QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA 113
Query: 129 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 188
++ QI G+ YL S +HRDL NI + ++ VKI D GLA ++
Sbjct: 114 SRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDY 170
Query: 189 SVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
V+ P + APE L D ++ +D++SFG+ + E+ F Y C SA+ + +
Sbjct: 171 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL--FTYCDKSCSPSAEFLRMM 228
Query: 243 SSGIKPAALSK 253
S ALS+
Sbjct: 229 GSERDVPALSR 239
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 69
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 70 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 127 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 182
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 68 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 125 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 135
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 203 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 259
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 192
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 260 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 317
Query: 193 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 245
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 377
Query: 246 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 286
P ++V + + + +V R + +E L P+LQ
Sbjct: 378 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 65 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 122 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 177
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 72
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 73 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 130 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 185
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 66 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 65 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 122 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 177
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 66 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 69 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 126 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 68 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 125 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 66 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 66 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 67 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 124 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G V+K + +GL +A + ++ P ++ E+ +L I+ FY
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFY 97
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
++ D ++I E GSL Q + ++ GL YL I+
Sbjct: 98 GAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 154
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
HRD+K NI +N ++GE+K+ D G++ + + A S +GT +M+PE L +Y+ +DI
Sbjct: 155 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 213
Query: 213 YSFGMCMLEMVTFEYP 228
+S G+ ++EM YP
Sbjct: 214 WSMGLSLVEMAVGRYP 229
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 65 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 122 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 177
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 66 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 16/261 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E++G G F V+K + GL++A ++ + +D E + +E+ ++ L H N+I+
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKT----RGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 92 FYNSWIDDQNKTVNIITELFTSGSL-RQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
Y+++ + +N V ++ E G L + + +QI G+ H H
Sbjct: 151 LYDAF-ESKNDIV-LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGI--RHMHQM 206
Query: 151 PIIHRDLKCDNIF-INGNQGEVKIGDLGLATIME-QANAKSVIGTPEFMAPELYDENYNE 208
I+H DLK +NI +N + ++KI D GLA + + K GTPEF+APE+ + ++
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVS 266
Query: 209 L-ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD--PEVKSFIEK 265
D++S G+ +++ P+ N A+ + + + +D E K FI K
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSPFL-GDNDAETLNNILACRWDLEDEEFQDISEEAKEFISK 325
Query: 266 CLVP-ASQRLSAKELLMDPFL 285
L+ S R+SA E L P+L
Sbjct: 326 LLIKEKSWRISASEALKHPWL 346
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 65 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 122 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 177
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 67 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 124 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G+F V+ NG A +V +++ + +E E +L + H IIR +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYA-MKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
++ D Q + +I + G L +A ++ L YLHS D II
Sbjct: 73 GTFQDAQQ--IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD--II 128
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN-YNELADI 212
+RDLK +NI ++ N G +KI D G A + + GTP+++APE+ YN+ D
Sbjct: 129 YRDLKPENILLDKN-GHIKITDFGFAKYVPDVTY-XLCGTPDYIAPEVVSTKPYNKSIDW 186
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
+SFG+ + EM+ P+ + N+ + Y+K+
Sbjct: 187 WSFGILIYEMLAGYTPFYDS-NTMKTYEKI 215
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 66 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+ + + Q+L GL + HSH
Sbjct: 66 KLLDV-IHTENKLYLVFE--FLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK +N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 123 R--VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G V+K + +GL +A + ++ P ++ E+ +L I+ FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
++ D ++I E GSL Q + ++ GL YL I+
Sbjct: 71 GAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
HRD+K NI +N ++GE+K+ D G++ + + A S +GT +M+PE L +Y+ +DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 213 YSFGMCMLEMVTFEYP 228
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 128/269 (47%), Gaps = 19/269 (7%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
Y +++GKG F V ++ G A +R +V+ + +++ +E +L++ +H +
Sbjct: 12 YLKLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
++ + + + E G L + + +I+S L YLHS D
Sbjct: 71 TALKYAF--QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 128
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPELYDEN-Y 206
+++RD+K +N+ ++ + G +KI D GL I + A K+ GTPE++APE+ ++N Y
Sbjct: 129 --VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 185
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
D + G+ M EM+ P+ ++ ++++ + ++ + PE KS +
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIRFPRTLSPEAKSLLAGL 242
Query: 267 LVP-ASQRLS-----AKELLMDP-FLQVN 288
L QRL AKE++ FL +N
Sbjct: 243 LKKDPKQRLGGGPSDAKEVMEHRFFLSIN 271
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMXGXVATRWYRAPEIM 214
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 259 VKSFIE 264
+++I+
Sbjct: 275 ARNYIQ 280
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G V+K + +GL +A + ++ P ++ E+ +L I+ FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
++ D ++I E GSL Q + ++ GL YL I+
Sbjct: 71 GAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
HRD+K NI +N ++GE+K+ D G++ + + A S +GT +M+PE L +Y+ +DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 213 YSFGMCMLEMVTFEYP 228
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 213
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 259 VKSFIE 264
+++I+
Sbjct: 274 ARNYIQ 279
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 214
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 259 VKSFIE 264
+++I+
Sbjct: 275 ARNYIQ 280
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 103/231 (44%), Gaps = 18/231 (7%)
Query: 24 TCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKS 83
TC KE +G G F V + + G +VA Q R + SP++ ER E+ ++K
Sbjct: 13 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRERWCLEIQIMKK 69
Query: 84 LKHNNIIRFYNSWIDDQNKTVN----IITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 139
L H N++ Q N + E G LR+Y G R +L
Sbjct: 70 LNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKY-LNQFENCCGLKEGPIRTLL 128
Query: 140 ----SGLIYLHSHDPPIIHRDLKCDNIFIN-GNQGEV-KIGDLGLATIMEQAN-AKSVIG 192
S L YLH + IIHRDLK +NI + G Q + KI DLG A ++Q +G
Sbjct: 129 SDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG 186
Query: 193 TPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
T +++APEL ++ Y D +SFG E +T P+ Q + KV
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 237
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD GL VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILGFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + F L+++ + Q+L GL + HSH
Sbjct: 66 KLLDV-IHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 42 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 101 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 156
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 157 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 215
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 216 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 245
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 103/231 (44%), Gaps = 18/231 (7%)
Query: 24 TCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKS 83
TC KE +G G F V + + G +VA Q R + SP++ ER E+ ++K
Sbjct: 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRERWCLEIQIMKK 68
Query: 84 LKHNNIIRFYNSWIDDQNKTVN----IITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 139
L H N++ Q N + E G LR+Y G R +L
Sbjct: 69 LNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKY-LNQFENCCGLKEGPIRTLL 127
Query: 140 ----SGLIYLHSHDPPIIHRDLKCDNIFIN-GNQGEV-KIGDLGLATIMEQAN-AKSVIG 192
S L YLH + IIHRDLK +NI + G Q + KI DLG A ++Q +G
Sbjct: 128 SDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG 185
Query: 193 TPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
T +++APEL ++ Y D +SFG E +T P+ Q + KV
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 128/269 (47%), Gaps = 19/269 (7%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
Y +++GKG F V ++ G A +R +V+ + +++ +E +L++ +H +
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
++ + + + E G L + + +I+S L YLHS D
Sbjct: 68 TALKYAF--QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPELYDEN-Y 206
+++RD+K +N+ ++ + G +KI D GL I + A K+ GTPE++APE+ ++N Y
Sbjct: 126 --VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
D + G+ M EM+ P+ ++ ++++ + ++ + PE KS +
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIRFPRTLSPEAKSLLAGL 239
Query: 267 LVP-ASQRLS-----AKELLMDP-FLQVN 288
L QRL AKE++ FL +N
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 259 VKSFIE 264
+++I+
Sbjct: 255 ARNYIQ 260
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 200
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 259 VKSFIE 264
+++I+
Sbjct: 261 ARNYIQ 266
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 129/288 (44%), Gaps = 41/288 (14%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ + I +NK + L + Q+L GL + HSH
Sbjct: 69 KLLDV-IHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 126
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--EN 205
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+ +
Sbjct: 127 -VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKY 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPA 249
Y+ DI+S G EMVT + SE +I++ + + G+ KP+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 250 A-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 128/269 (47%), Gaps = 19/269 (7%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
Y +++GKG F V ++ G A +R +V+ + +++ +E +L++ +H +
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
++ + + + E G L + + +I+S L YLHS D
Sbjct: 68 TALKYAF--QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPELYDEN-Y 206
+++RD+K +N+ ++ + G +KI D GL I + A K+ GTPE++APE+ ++N Y
Sbjct: 126 --VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
D + G+ M EM+ P+ ++ ++++ + ++ + PE KS +
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIRFPRTLSPEAKSLLAGL 239
Query: 267 LVP-ASQRLS-----AKELLMDP-FLQVN 288
L QRL AKE++ FL +N
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G V+K + +GL +A + ++ P ++ E+ +L I+ FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
++ D ++I E GSL Q + ++ GL YL I+
Sbjct: 71 GAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
HRD+K NI +N ++GE+K+ D G++ + + A S +GT +M+PE L +Y+ +DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 213 YSFGMCMLEMVTFEYP 228
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G V+K + +GL +A + ++ P ++ E+ +L I+ FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
++ D ++I E GSL Q + ++ GL YL I+
Sbjct: 71 GAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
HRD+K NI +N ++GE+K+ D G++ + + A S +GT +M+PE L +Y+ +DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 213 YSFGMCMLEMVTFEYP 228
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 26/240 (10%)
Query: 13 PPDPDVLETDPTCRYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSP 68
P DP + E R+++Y +GKG F +V Y + G VA + + S
Sbjct: 2 PQDPTIFEE----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVA-----VKQLQHSG 52
Query: 69 EDLERLYS-EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXX 126
D +R + E+ +LK+L + I+++ +++ ++ E SG LR + +
Sbjct: 53 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL 112
Query: 127 XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN 186
++ QI G+ YL S +HRDL NI + ++ VKI D GLA ++
Sbjct: 113 DASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDK 169
Query: 187 AKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
V+ P + APE L D ++ +D++SFG+ + E+ F Y C SA+ +
Sbjct: 170 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL--FTYCDKSCSPSAEFLR 227
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 129/288 (44%), Gaps = 41/288 (14%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ + I +NK + + + Q+L GL + HSH
Sbjct: 65 KLLDV-IHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--EN 205
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+ +
Sbjct: 123 -VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKY 179
Query: 206 YNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPA 249
Y+ DI+S G EMVT + SE +I++ + + G+ KP+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 250 A-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQILRGL 134
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 190
Query: 203 DE--NYNELADIYSFGMCMLEMVT 224
+YN+ DI+S G M E++T
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 42 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 97
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 98 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 154
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 155 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 211
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
++ A ++ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 212 VKGATW-TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 269
Query: 241 KVSSG 245
K+ SG
Sbjct: 270 KIVSG 274
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 90
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 148
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 149 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 204
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 205 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 264
Query: 259 VKSFIE 264
+++I+
Sbjct: 265 ARNYIQ 270
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 13/258 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ N +A +V L+ +L E+ + L+H NI+R Y
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMA-LKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 81
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
N + D K + ++ E G L + + ++ L Y H +I
Sbjct: 82 NYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 137
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G +GE+KI D G + + + GT +++ PE+ + + ++E D+
Sbjct: 138 HRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 196
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK-PAALSKVKDPEVKSFIEKCL-VPA 270
+ G+ E + P+ ++ + V+ +K P LS K I K L
Sbjct: 197 WCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGS----KDLISKLLRYHP 252
Query: 271 SQRLSAKELLMDPFLQVN 288
QRL K ++ P+++ N
Sbjct: 253 PQRLPLKGVMEHPWVKAN 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 28 IRYKEVIGKGAFKTVYKA-FDEVNGLEVAWC-QVRIDDVLQSPEDLERLYSEVHLLKSLK 85
+R E +G G+F V + +D +G V+ + DVL PE ++ EV+ + SL
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRXXXXXXXXXXXXGWARQILSGLIY 144
H N+IR Y + + ++TEL GSL + R +A Q+ G+ Y
Sbjct: 80 HRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTP-EFMAP 199
L S IHRDL N+ + + VKIGD GL + Q + V+ P + AP
Sbjct: 137 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 200 E-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
E L ++ +D + FG+ + EM T+ N +QI K+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 130/291 (44%), Gaps = 27/291 (9%)
Query: 29 RYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVL-QSP-EDLERLYSEVHLLKSLK- 85
R ++GKG F TV+ + L+VA + + VL SP D EV LL +
Sbjct: 34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93
Query: 86 ---HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
H +IR + W + Q + ++ + L Y + Q+++ +
Sbjct: 94 GGGHPGVIRLLD-WFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
+ HS ++HRD+K +NI I+ +G K+ D G ++ GT + PE
Sbjct: 153 QHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWI 210
Query: 203 DEN-YNEL-ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVK 260
+ Y+ L A ++S G+ + +MV + P+ R+ + ++ PA +S P+
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFE--RDQEILEAELHF---PAHVS----PDCC 261
Query: 261 SFIEKCLVP-ASQRLSAKELLMDPFLQVNG------TTKNRPLPLPDIVLP 304
+ I +CL P S R S +E+L+DP++Q +K P PL +LP
Sbjct: 262 ALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGPAPLAWSLLP 312
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 13/258 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ N +A +V L+ +L E+ + L+H NI+R Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMA-LKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
N + D K + ++ E G L + + ++ L Y H +I
Sbjct: 81 NYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 136
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G +GE+KI D G + + + GT +++ PE+ + + ++E D+
Sbjct: 137 HRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 195
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK-PAALSKVKDPEVKSFIEKCL-VPA 270
+ G+ E + P+ ++ + V+ +K P LS K I K L
Sbjct: 196 WCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGS----KDLISKLLRYHP 251
Query: 271 SQRLSAKELLMDPFLQVN 288
QRL K ++ P+++ N
Sbjct: 252 PQRLPLKGVMEHPWVKAN 269
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 19/238 (7%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSE 77
E P+C + ++VIG G F VYK + + + V I + + +R+ E
Sbjct: 40 EIHPSC--VTRQKVIGAGEFGEVYKGMLKTSSGKKE-VPVAIKTLKAGYTEKQRVDFLGE 96
Query: 78 VHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWAR 136
++ H+NIIR + + K + IITE +G+L ++ R G R
Sbjct: 97 AGIMGQFSHHNIIRLEG--VISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR 154
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME---QANAKSVIGT 193
I +G+ YL + + +HRDL NI +N N K+ D GL+ ++E +A + G
Sbjct: 155 GIAAGMKYLANMN--YVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 194 --PEFMAPELYD-ENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ APE + +D++SFG+ M E++T+ E PY E N ++ K ++ G +
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAINDGFR 268
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D GLA + + T + APE+
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIM 190
Query: 203 DE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPE 258
+YN+ DI+S G M E++T +P ++ + ++ ++ L K+
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 259 VKSFIE 264
+++I+
Sbjct: 251 ARNYIQ 256
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 13/258 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ N +A +V L+ +L E+ + L+H NI+R Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMA-LKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
N + D K + ++ E G L + + ++ L Y H +I
Sbjct: 81 NYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 136
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G +GE+KI D G + + + GT +++ PE+ + + ++E D+
Sbjct: 137 HRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 195
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK-PAALSKVKDPEVKSFIEKCL-VPA 270
+ G+ E + P+ ++ + V+ +K P LS K I K L
Sbjct: 196 WCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGS----KDLISKLLRYHP 251
Query: 271 SQRLSAKELLMDPFLQVN 288
QRL K ++ P+++ N
Sbjct: 252 PQRLPLKGVMEHPWVKAN 269
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA V A + V VA V+I D+ ++ + E + E+ + K L H N+++
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
Y +++GKG F V ++ G A +R +V+ + +++ +E +L++ +H +
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
++ + + + E G L + + +I+S L YLHS D
Sbjct: 68 TALKYAF--QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPELYDEN-Y 206
+++RD+K +N+ ++ + G +KI D GL I + A K GTPE++APE+ ++N Y
Sbjct: 126 --VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
D + G+ M EM+ P+ ++ ++++ + ++ + PE KS +
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIRFPRTLSPEAKSLLAGL 239
Query: 267 LVP-ASQRLS-----AKELLMDP-FLQVN 288
L QRL AKE++ FL +N
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
Y +++GKG F V ++ G A +R +V+ + +++ +E +L++ +H +
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
++ + + + E G L + + +I+S L YLHS D
Sbjct: 68 TALKYAF--QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPELYDEN-Y 206
+++RD+K +N+ ++ + G +KI D GL I + A K GTPE++APE+ ++N Y
Sbjct: 126 --VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
D + G+ M EM+ P+ ++ ++++ + ++ + PE KS +
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIRFPRTLSPEAKSLLAGL 239
Query: 267 LVP-ASQRLS-----AKELLMDP-FLQVN 288
L QRL AKE++ FL +N
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 32 EVIGKGAFKTVYKA-FDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK-SLKHNNI 89
+++GKG+F V+ A F + N + + DV+ +D+E E +L + +H +
Sbjct: 24 KMLGKGSFGKVFLAEFKKTN--QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 81
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
+ ++ +N + + E G L + +A +I+ GL +LHS
Sbjct: 82 THMFCTFQTKEN--LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 139
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPE-LYDENY 206
I++RDLK DNI ++ + G +KI D G+ ++ A GTP+++APE L + Y
Sbjct: 140 --IVYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKY 196
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK--KVSSGIKPAALSK-VKDPEVKSFI 263
N D +SFG+ + EM+ + P+ ++ +++ ++ + P L K KD VK F+
Sbjct: 197 NHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFV 255
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 32 EVIGKGAFKTVYKA-FDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK-SLKHNNI 89
+++GKG+F V+ A F + N + + DV+ +D+E E +L + +H +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTN--QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 80
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
+ ++ +N + + E G L + +A +I+ GL +LHS
Sbjct: 81 THMFCTFQTKEN--LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPE-LYDENY 206
I++RDLK DNI ++ + G +KI D G+ ++ A GTP+++APE L + Y
Sbjct: 139 --IVYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKY 195
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK--KVSSGIKPAALSK-VKDPEVKSFI 263
N D +SFG+ + EM+ + P+ ++ +++ ++ + P L K KD VK F+
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFV 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 33 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 91
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 92 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 147
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 148 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 206
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 207 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 236
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 26/251 (10%)
Query: 15 DPDVLETDPTCRYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPED 70
DP + E R+++Y +GKG F +V Y + G VA + + S D
Sbjct: 16 DPTIFEE----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVA-----VKQLQHSGPD 66
Query: 71 LERLYS-EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXX 128
+R + E+ +LK+L + I+++ +++ ++ E SG LR + +
Sbjct: 67 QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA 126
Query: 129 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 188
++ QI G+ YL S +HRDL NI + ++ VKI D GLA ++
Sbjct: 127 SRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDY 183
Query: 189 SVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
V+ P + APE L D ++ +D++SFG+ + E+ F Y C SA+ + +
Sbjct: 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL--FTYCDKSCSPSAEFLRMM 241
Query: 243 SSGIKPAALSK 253
ALS+
Sbjct: 242 GCERDVPALSR 252
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 126/271 (46%), Gaps = 17/271 (6%)
Query: 24 TCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKS 83
T Y +++GKG F V ++ G A ++ +V+ + +++ +E +L++
Sbjct: 149 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYA-MKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 84 LKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLI 143
+H + S+ + + + E G L + + +I+S L
Sbjct: 208 SRHPFLTALKYSF--QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 265
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPEL 201
YLHS + +++RDLK +N+ ++ + G +KI D GL I + A K+ GTPE++APE+
Sbjct: 266 YLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 323
Query: 202 YDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVK 260
++N Y D + G+ M EM+ P+ ++ ++++ + ++ + PE K
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELIL--MEEIRFPRTLGPEAK 380
Query: 261 SFIEKCLVP-ASQRLS-----AKELLMDPFL 285
S + L QRL AKE++ F
Sbjct: 381 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
Y +++GKG F V ++ G A +R +V+ + +++ +E +L++ +H +
Sbjct: 14 YLKLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
++ + + + E G L + + +I+S L YLHS D
Sbjct: 73 TALKYAF--QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 130
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPELYDEN-Y 206
+++RD+K +N+ ++ + G +KI D GL I + A K GTPE++APE+ ++N Y
Sbjct: 131 --VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
D + G+ M EM+ P+ ++ ++++ + ++ + PE KS +
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIRFPRTLSPEAKSLLAGL 244
Query: 267 LVP-ASQRLS-----AKELLMDP-FLQVN 288
L QRL AKE++ FL +N
Sbjct: 245 LKKDPKQRLGGGPSDAKEVMEHRFFLSIN 273
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLE-RLYSEVHLLKSL- 84
RY+ V IG GA+ TVYKA D +G VA VR+ + L EV LL+ L
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 85 --KHNNIIRFYNSWIDDQNKTVNIITELF--TSGSLRQY--RXXXXXXXXXXXXGWARQI 138
+H N++R + + +T +F LR Y + RQ
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 139 LSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAKSVIGTPEFM 197
L GL +LH++ I+HRDLK +NI + G VK+ D GLA I Q V+ T +
Sbjct: 130 LRGLDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALTPVVVTLWYR 186
Query: 198 APE-LYDENYNELADIYSFGMCMLEM 222
APE L Y D++S G EM
Sbjct: 187 APEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 42 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 101 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 156
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 157 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDL 215
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 216 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 245
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 28 IRYKEVIGKGAFKTVYKA-FDEVNGLEVAWC-QVRIDDVLQSPEDLERLYSEVHLLKSLK 85
+R E +G G+F V + +D +G V+ + DVL PE ++ EV+ + SL
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRXXXXXXXXXXXXGWARQILSGLIY 144
H N+IR Y + + ++TEL GSL + R +A Q+ G+ Y
Sbjct: 80 HRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTP-EFMAP 199
L S IHRDL N+ + + VKIGD GL + Q + V+ P + AP
Sbjct: 137 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 200 E-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
E L ++ +D + FG+ + EM T+ N +QI K+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 17/265 (6%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
Y +++GKG F V ++ G A ++ +V+ + +++ +E +L++ +H +
Sbjct: 152 YLKLLGKGTFGKVILVKEKATGRYYA-MKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
S+ + + + E G L + + +I+S L YLHS +
Sbjct: 211 TALKYSF--QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS-E 267
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPELYDEN-Y 206
+++RDLK +N+ ++ + G +KI D GL I + A K+ GTPE++APE+ ++N Y
Sbjct: 268 KNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 326
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
D + G+ M EM+ P+ ++ ++++ + ++ + PE KS +
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELIL--MEEIRFPRTLGPEAKSLLSGL 383
Query: 267 LVP-ASQRLS-----AKELLMDPFL 285
L QRL AKE++ F
Sbjct: 384 LKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 28 IRYKEVIGKGAFKTVYKA-FDEVNGLEVAWCQVRI--DDVLQSPEDLERLYSEVHLLKSL 84
+R E +G G+F V + +D +G V+ V+ DVL PE ++ EV+ + SL
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRXXXXXXXXXXXXGWARQILSGLI 143
H N+IR Y + + ++TEL GSL + R +A Q+ G+
Sbjct: 69 DHRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTP-EFMA 198
YL S IHRDL N+ + + VKIGD GL + Q + V+ P + A
Sbjct: 126 YLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 199 PE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
PE L ++ +D + FG+ + EM T+ N +QI K+
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLK 85
RY+ V IG GA+ TVYKA D +G VA VR+ + + P R + + L++ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELF--TSGSLRQY--RXXXXXXXXXXXXGWARQILSG 141
H N++R + + +T +F LR Y + RQ L G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAKSVIGTPEFMAPE 200
L +LH++ I+HRDLK +NI + G VK+ D GLA I Q V+ T + APE
Sbjct: 125 LDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALAPVVVTLWYRAPE 181
Query: 201 -LYDENYNELADIYSFGMCMLEM 222
L Y D++S G EM
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 21/222 (9%)
Query: 13 PPDPDVLETDPTCRYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSP 68
P DP V RY++ +G+G F V Y ++ G VA ++ D P
Sbjct: 22 PGDPTVFHK----RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD---AGP 74
Query: 69 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 128
+ E+ +L++L H +II++ D ++ ++ E GSLR Y
Sbjct: 75 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLA 134
Query: 129 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 188
+A+QI G+ YLH+ IHRDL N+ ++ N VKIGD GLA + + +
Sbjct: 135 QLLL-FAQQICEGMAYLHAQH--YIHRDLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEX 190
Query: 189 SVI----GTPEFM-APELYDE-NYNELADIYSFGMCMLEMVT 224
+ +P F APE E + +D++SFG+ + E++T
Sbjct: 191 YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 133/290 (45%), Gaps = 45/290 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA +++ G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSH 148
+ + I +NK + + L+++ + Q+L GL + HSH
Sbjct: 69 KLLDV-IHTENKLYLVFEHV--DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD-- 203
++HRDLK N+ IN +G +K+ D GLA + + V+ T + APE+
Sbjct: 126 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------K 247
+ Y+ DI+S G EMVT + SE +I++ + + G+ K
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 248 PAA-------LSKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
P+ SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
Y +++GKG F V ++ G A +R +V+ + +++ +E +L++ +H +
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
++ + + + E G L + + +I+S L YLHS D
Sbjct: 68 TALKYAF--QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPELYDEN-Y 206
+++RD+K +N+ ++ + G +KI D GL I + A K GTPE++APE+ ++N Y
Sbjct: 126 --VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
D + G+ M EM+ P+ ++ ++++ + ++ + PE KS +
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIRFPRTLSPEAKSLLAGL 239
Query: 267 LVP-ASQRLS-----AKELLMDP-FLQVN 288
L QRL AKE++ FL +N
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 14/214 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+GA+ V A + V VA V+I D+ ++ + E + E+ + L H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
FY + + E + G L + Q+++G++YLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--EN 205
I HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 239
+ E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 195 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLK 85
RY+ V IG GA+ TVYKA D +G VA VR+ + + P R + + L++ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELF--TSGSLRQY--RXXXXXXXXXXXXGWARQILSG 141
H N++R + + +T +F LR Y + RQ L G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAKSVIGTPEFMAPE 200
L +LH++ I+HRDLK +NI + G VK+ D GLA I Q V+ T + APE
Sbjct: 125 LDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALDPVVVTLWYRAPE 181
Query: 201 -LYDENYNELADIYSFGMCMLEM 222
L Y D++S G EM
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 17/271 (6%)
Query: 24 TCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKS 83
T Y +++GKG F V ++ G A ++ +V+ + +++ +E +L++
Sbjct: 8 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYA-MKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 84 LKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLI 143
+H + S+ + + + E G L + + +I+S L
Sbjct: 67 SRHPFLTALKYSF--QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 124
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPEL 201
YLHS + +++RDLK +N+ ++ + G +KI D GL I + A K GTPE++APE+
Sbjct: 125 YLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 182
Query: 202 YDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVK 260
++N Y D + G+ M EM+ P+ ++ ++++ + ++ + PE K
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELIL--MEEIRFPRTLGPEAK 239
Query: 261 SFIEKCLVP-ASQRLS-----AKELLMDPFL 285
S + L QRL AKE++ F
Sbjct: 240 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 35/276 (12%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-------SPEDLERLYSEVHLLKSL 84
EVIGKG F V + + G + A V+I DV + S EDL+R S H+LK
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFA---VKIVDVAKFTSSPGLSTEDLKREASICHMLK-- 86
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSL----RQYRXXXXXXXXXXXXGWARQILS 140
H +I+ ++ D + ++ E L + + RQIL
Sbjct: 87 -HPHIVELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 141 GLIYLHSHDPPIIHRDLK--CDNIFINGNQGEVKIGDLGLATIMEQAN--AKSVIGTPEF 196
L Y HD IIHRD+K C + N VK+G G+A + ++ A +GTP F
Sbjct: 144 ALRY--CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHF 201
Query: 197 MAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG---IKPAALS 252
MAPE+ E Y + D++ G+ + +++ P+ + ++++ + G + P S
Sbjct: 202 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWS 259
Query: 253 KVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQ 286
+ + K + + L+ PA +R++ E L P+L+
Sbjct: 260 HISE-SAKDLVRRMLMLDPA-ERITVYEALNHPWLK 293
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G + + + ++ + L Y HS +I
Sbjct: 80 GYFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 195 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 95
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 96 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 154 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK-----PAALSKVKDP 257
E + + +D+++ G + ++V P+ N I++K+ IK PAA P
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPAAFF----P 262
Query: 258 EVKSFIEKCLV-PASQRLSAKEL 279
+ + +EK LV A++RL +E+
Sbjct: 263 KARDLVEKLLVLDATKRLGCEEM 285
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYS---EVHLLKSL 84
I Y++ IGKG F V+K + VA + + D E +E+ EV ++ +L
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILS---G 141
H NI++ Y + ++ E G L Y R +L G
Sbjct: 81 NHPNIVKLYGL----MHNPPRMVMEFVPCGDL--YHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGE----VKIGDLGLATIMEQANAKSV---IGTP 194
+ Y+ + +PPI+HRDL+ NIF+ K+ D GL+ Q + SV +G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGLLGNF 190
Query: 195 EFMAPELY---DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV--SSGIKPA 249
++MAPE +E+Y E AD YSF M + ++T E P+ E + + G++P
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP- 249
Query: 250 ALSKVKDPEVKSFIEKC 266
+ + P +++ IE C
Sbjct: 250 TIPEDCPPRLRNVIELC 266
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 17/271 (6%)
Query: 24 TCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKS 83
T Y +++GKG F V ++ G A ++ +V+ + +++ +E +L++
Sbjct: 7 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYA-MKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 84 LKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLI 143
+H + S+ + + + E G L + + +I+S L
Sbjct: 66 SRHPFLTALKYSF--QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 123
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPEL 201
YLHS + +++RDLK +N+ ++ + G +KI D GL I + A K GTPE++APE+
Sbjct: 124 YLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 181
Query: 202 YDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVK 260
++N Y D + G+ M EM+ P+ ++ ++++ + ++ + PE K
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELIL--MEEIRFPRTLGPEAK 238
Query: 261 SFIEKCLVP-ASQRLS-----AKELLMDPFL 285
S + L QRL AKE++ F
Sbjct: 239 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 28 IRYKEVIGKGAFKTVYKA-FDEVNGLEVAWCQVRI--DDVLQSPEDLERLYSEVHLLKSL 84
+R E +G G+F V + +D +G V+ V+ DVL PE ++ EV+ + SL
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRXXXXXXXXXXXXGWARQILSGLI 143
H N+IR Y + + ++TEL GSL + R +A Q+ G+
Sbjct: 73 DHRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTP-EFMA 198
YL S IHRDL N+ + + VKIGD GL + Q + V+ P + A
Sbjct: 130 YLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 199 PE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
PE L ++ +D + FG+ + EM T+ N +QI K+
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 17/271 (6%)
Query: 24 TCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKS 83
T Y +++GKG F V ++ G A ++ +V+ + +++ +E +L++
Sbjct: 6 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYA-MKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 84 LKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLI 143
+H + S+ + + + E G L + + +I+S L
Sbjct: 65 SRHPFLTALKYSF--QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 122
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPEL 201
YLHS + +++RDLK +N+ ++ + G +KI D GL I + A K GTPE++APE+
Sbjct: 123 YLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 180
Query: 202 YDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVK 260
++N Y D + G+ M EM+ P+ ++ ++++ + ++ + PE K
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELIL--MEEIRFPRTLGPEAK 237
Query: 261 SFIEKCLVP-ASQRLS-----AKELLMDPFL 285
S + L QRL AKE++ F
Sbjct: 238 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 14/214 (6%)
Query: 21 TDPTC---RYIRYKEVIGKGAF-KTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYS 76
+DPT RY++ +G+G F K +D N V+ P+
Sbjct: 6 SDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ 65
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 136
E+ +L++L H +II++ D K++ ++ E GSLR Y +A+
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-FAQ 124
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----G 192
QI G+ YLHS IHR+L N+ ++ N VKIGD GLA + + + +
Sbjct: 125 QICEGMAYLHSQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 193 TPEFM-APELYDE-NYNELADIYSFGMCMLEMVT 224
+P F APE E + +D++SFG+ + E++T
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 28 IRYKEVIGKGAFKTVYKA-FDEVNGLEVAWCQVRI--DDVLQSPEDLERLYSEVHLLKSL 84
+R E +G G+F V + +D +G V+ V+ DVL PE ++ EV+ + SL
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRXXXXXXXXXXXXGWARQILSGLI 143
H N+IR Y + + ++TEL GSL + R +A Q+ G+
Sbjct: 73 DHRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTP-EFMA 198
YL S IHRDL N+ + + VKIGD GL + Q + V+ P + A
Sbjct: 130 YLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 199 PE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
PE L ++ +D + FG+ + EM T+ N +QI K+
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 20/220 (9%)
Query: 20 ETDPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLE 72
E DPT R+++ +G+G F V Y + G +VA ++ + DL+
Sbjct: 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK 71
Query: 73 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYR-XXXXXXXXXXX 131
+ E+ +L++L H NI+++ +D + +I E SGSL++Y
Sbjct: 72 K---EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ 128
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI 191
+A QI G+ YL S +HRDL N+ + ++ +VKIGD GL +E +
Sbjct: 129 LKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVE-SEHQVKIGDFGLTKAIETDKEXXTV 185
Query: 192 G----TPEFM-APE-LYDENYNELADIYSFGMCMLEMVTF 225
+P F APE L + +D++SFG+ + E++T+
Sbjct: 186 KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY 225
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 15 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 73
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 74 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 129
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 130 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 188
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 189 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 28 IRYKEVIGKGAFKTVYKA-FDEVNGLEVAWC-QVRIDDVLQSPEDLERLYSEVHLLKSLK 85
+R E +G G+F V + +D +G V+ + DVL PE ++ EV+ + SL
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRXXXXXXXXXXXXGWARQILSGLIY 144
H N+IR Y + + ++TEL GSL + R +A Q+ G+ Y
Sbjct: 70 HRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTP-EFMAP 199
L S IHRDL N+ + + VKIGD GL + Q + V+ P + AP
Sbjct: 127 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 200 E-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
E L ++ +D + FG+ + EM T+ N +QI K+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDL 190
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 191 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 20 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 134
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 135 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 194 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 223
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 35/276 (12%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-------SPEDLERLYSEVHLLKSL 84
EVIGKG F V + + G + A V+I DV + S EDL+R S H+LK
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFA---VKIVDVAKFTSSPGLSTEDLKREASICHMLK-- 84
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSL----RQYRXXXXXXXXXXXXGWARQILS 140
H +I+ ++ D + ++ E L + + RQIL
Sbjct: 85 -HPHIVELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 141 GLIYLHSHDPPIIHRDLK--CDNIFINGNQGEVKIGDLGLATIMEQAN--AKSVIGTPEF 196
L Y HD IIHRD+K C + N VK+G G+A + ++ A +GTP F
Sbjct: 142 ALRY--CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHF 199
Query: 197 MAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG---IKPAALS 252
MAPE+ E Y + D++ G+ + +++ P+ + ++++ + G + P S
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWS 257
Query: 253 KVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQ 286
+ + K + + L+ PA +R++ E L P+L+
Sbjct: 258 HISE-SAKDLVRRMLMLDPA-ERITVYEALNHPWLK 291
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 8/196 (4%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G V K +GL +A + ++ P ++ E+ +L I+ FY
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 80
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
++ D ++I E GSL Q + +L GL YL I+
Sbjct: 81 GAFYSDGE--ISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ-IM 137
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
HRD+K NI +N ++GE+K+ D G++ + + A S +GT +MAPE L +Y+ +DI
Sbjct: 138 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDI 196
Query: 213 YSFGMCMLEMVTFEYP 228
+S G+ ++E+ YP
Sbjct: 197 WSMGLSLVELAVGRYP 212
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A E N + +V L+ +L EV + L+H NI+R Y
Sbjct: 16 LGKGKFGNVYLA-REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 75 GYFHDSTR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK--VI 130
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E YK++S
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQDTYKRIS 219
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 28 IRYKEVIGKGAFKTVYKA-FDEVNGLEVAWCQVRI--DDVLQSPEDLERLYSEVHLLKSL 84
+R E +G G+F V + +D +G V+ V+ DVL PE ++ EV+ + SL
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRXXXXXXXXXXXXGWARQILSGLI 143
H N+IR Y + + ++TEL GSL + R +A Q+ G+
Sbjct: 69 DHRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTP-EFMA 198
YL S IHRDL N+ + + VKIGD GL + Q + V+ P + A
Sbjct: 126 YLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 199 PE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
PE L ++ +D + FG+ + EM T+ N +QI K+
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 77 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 132
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 133 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 192 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 117/259 (45%), Gaps = 11/259 (4%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE + ++E D+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDL 194
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-AS 271
+S G+ E + + P+ E + YK++S + I + L S
Sbjct: 195 WSLGVLCYEFLVGKPPF-EANTYQETYKRISR--VEFTFPDFVTEGARDLISRLLKHNPS 251
Query: 272 QRLSAKELLMDPFLQVNGT 290
QR +E+L P++ N +
Sbjct: 252 QRPXLREVLEHPWITANSS 270
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLK 85
RY+ V IG GA+ TVYKA D +G VA VR+ + + P R + + L++ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELF--TSGSLRQY--RXXXXXXXXXXXXGWARQILSG 141
H N++R + + +T +F LR Y + RQ L G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAKSVIGTPEFMAPE 200
L +LH++ I+HRDLK +NI + G VK+ D GLA I Q V+ T + APE
Sbjct: 125 LDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALFPVVVTLWYRAPE 181
Query: 201 -LYDENYNELADIYSFGMCMLEM 222
L Y D++S G EM
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G + + + ++ + L Y HS +I
Sbjct: 80 GYFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDL 194
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 195 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDL 190
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 191 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + IG G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTIGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYMPGGDMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 22 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 42 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 97
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 98 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 154
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 155 RIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 211
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 212 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 269
Query: 241 KVSSG 245
K+ SG
Sbjct: 270 KIVSG 274
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 19/249 (7%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G GA+ +V A+D +VA ++ QS R Y E+ LLK LKH N+I
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVA--VKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 94 NSW-----IDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
+ + I+D ++ V ++T L G+ Q+L GL Y+HS
Sbjct: 94 DVFTPATSIEDFSE-VYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NY 206
IIHRDLK N+ +N + E++I D GLA ++ + T + APE+ +Y
Sbjct: 151 G--IIHRDLKPSNVAVNED-SELRILDFGLARQADE-EMTGYVATRWYRAPEIMLNWMHY 206
Query: 207 NELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 264
N+ DI+S G M E++ + +P S+ + + +V P L+K+ +++I+
Sbjct: 207 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
Query: 265 KCLVPASQR 273
L P Q+
Sbjct: 267 -SLPPMPQK 274
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFAEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 190
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 191 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADEPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 195 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 127/259 (49%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 92
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGL--SYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A S +GT ++++PEL
Sbjct: 151 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + ++ +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 263
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + IG G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTIGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYMPGGDMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + IG G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTIGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 8 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 63
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 64 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 120
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 121 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-EQGYIQVTDFGFAKR 177
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 178 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 235
Query: 241 KVSSG 245
K+ SG
Sbjct: 236 KIVSG 240
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 21/244 (8%)
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
H NI++ + + DQ T ++ EL G L + R+++S +
Sbjct: 65 HPNIVKLHEVF-HDQLHTF-LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS-- 120
Query: 146 HSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA--KSVIGTPEFMAPEL 201
H HD ++HRDLK +N+ + E+KI D G A + N K+ T + APEL
Sbjct: 121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL 180
Query: 202 YDEN-YNELADIYSFGMCMLEMVTFEYPYSE------CRNSAQIYKKVSSG---IKPAAL 251
++N Y+E D++S G+ + M++ + P+ C ++ +I KK+ G + A
Sbjct: 181 LNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAW 240
Query: 252 SKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFG 310
V E K I+ L V ++RL L + +LQ + PL PDI L GA
Sbjct: 241 KNVSQ-EAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDI-LGSSGAAV 298
Query: 311 DRCL 314
C+
Sbjct: 299 HTCV 302
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 16 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 71
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 72 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 128
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 129 RIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 185
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 186 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 243
Query: 241 KVSSG 245
K+ SG
Sbjct: 244 KIVSG 248
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLIID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ E +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKE-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D GLA
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGLAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + + GT +++ PE+ + ++E D+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 14/214 (6%)
Query: 21 TDPTC---RYIRYKEVIGKGAF-KTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYS 76
+DPT RY++ +G+G F K +D N V+ P+
Sbjct: 6 SDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ 65
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 136
E+ +L++L H +II++ D K++ ++ E GSLR Y +A+
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-FAQ 124
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----G 192
QI G+ YLH+ IHR+L N+ ++ N VKIGD GLA + + + +
Sbjct: 125 QICEGMAYLHAQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 193 TPEFM-APELYDE-NYNELADIYSFGMCMLEMVT 224
+P F APE E + +D++SFG+ + E++T
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ +A +V L+ +L EV + L+H NI+R Y
Sbjct: 13 LGKGKFGNVYLAREKQRKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 71
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 72 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 127
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI D G + + ++ GT +++ PE+ + ++E D+
Sbjct: 128 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 186
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 187 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 216
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 77 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 132
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI + G + + ++ GT +++ PE+ + ++E D+
Sbjct: 133 HRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 192 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 19/249 (7%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G GA+ +V A+D +VA ++ QS R Y E+ LLK LKH N+I
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVA--VKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 94 NSW-----IDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
+ + I+D ++ V ++T L G+ Q+L GL Y+HS
Sbjct: 94 DVFTPATSIEDFSE-VYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NY 206
IIHRDLK N+ +N + E++I D GLA ++ + T + APE+ +Y
Sbjct: 151 G--IIHRDLKPSNVAVNED-SELRILDFGLARQADE-EMTGYVATRWYRAPEIMLNWMHY 206
Query: 207 NELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 264
N+ DI+S G M E++ + +P S+ + + +V P L+K+ +++I+
Sbjct: 207 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
Query: 265 KCLVPASQR 273
L P Q+
Sbjct: 267 -SLPPMPQK 274
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 72 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXX 131
E + E+ +SL+H NI+RF + + + II E + G L +
Sbjct: 61 ENVQREIINHRSLRHPNIVRFKEVILTPTH--LAIIMEYASGGELYERICNAGRFSEDEA 118
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLA-TIMEQANAKS 189
+ +Q+LSG+ Y HS I HRDLK +N ++G+ +KI D G + + + + KS
Sbjct: 119 RFFFQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 176
Query: 190 VIGTPEFMAPE--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK 247
+GTP ++APE L E ++AD++S G+ + M+ YP+ E + Y+K I
Sbjct: 177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF-EDPEEPRDYRKTIQRIL 235
Query: 248 PAALSKVKD----PEVKSFIEKCLV--PASQRLSAKEL 279
S D PE I + V PA+ R+S E+
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPAT-RISIPEI 272
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V + G A +
Sbjct: 22 KAKEDFLKKWESPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 49/267 (18%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E+IG G F V+KA ++G +V+ ++ E+ EV L L H NI+
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN--------EKAEREVKALAKLDHVNIVH 69
Query: 92 FYNSW---------IDD------------------QNKTVNIITELFTSGSLRQY--RXX 122
+ W DD + K + I E G+L Q+ +
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 123 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM 182
QI G+ Y+HS +IHRDLK NIF+ + +VKIGD GL T +
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDTK-QVKIGDFGLVTSL 186
Query: 183 EQANAKS-VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ ++ GT +M+PE + ++Y + D+Y+ G+ + E++ C ++A
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV------C-DTAFETS 239
Query: 241 KVSSGIKPAALSKVKDPEVKSFIEKCL 267
K + ++ +S + D + K+ ++K L
Sbjct: 240 KFFTDLRDGIISDIFDKKEKTLLQKLL 266
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAW-CQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
++ +V+G GAF TVYK G V ++I + P+ E ++ S+ H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYL 145
+++R + + T+ ++T+L G L +Y W QI G++YL
Sbjct: 100 PHLVRLLGVCL---SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 156
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME----QANAKSVIGTPEFMAPE- 200
++HRDL N+ + + VKI D GLA ++E + NA ++MA E
Sbjct: 157 EERR--LVHRDLAARNVLVK-SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 201 LYDENYNELADIYSFGMCMLEMVTF 225
++ + +D++S+G+ + E++TF
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + +M YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 19 LETDPTCRYIRYKEV---IGKGAFKTVYKAFDEVNGLE-VAWCQVRIDDVLQS-PEDLER 73
+E D CR + E IG+GA+ V+KA D NG VA +VR+ + P R
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELF--TSGSLRQY--RXXXXXXXXX 129
+ + L++ +H N++R ++ + +T +F L Y +
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 130 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAK 188
Q+L GL +LHSH ++HRDLK NI + + G++K+ D GLA I Q
Sbjct: 121 TIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALT 177
Query: 189 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEM 222
SV+ T + APE L +Y D++S G EM
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 36/254 (14%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
E+IG G F V+KA ++G +V+ ++ E+ EV L L H NI+
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVH 68
Query: 92 FYNSW--------------IDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXXXGWA 135
+ W + K + I E G+L Q+ +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-VIGTP 194
QI G+ Y+HS +I+RDLK NIF+ + +VKIGD GL T ++ + GT
Sbjct: 129 EQITKGVDYIHS--KKLINRDLKPSNIFLVDTK-QVKIGDFGLVTSLKNDGKRXRSKGTL 185
Query: 195 EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSK 253
+M+PE + ++Y + D+Y+ G+ + E++ C ++A K + ++ +S
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELLHV------C-DTAFETSKFFTDLRDGIISD 238
Query: 254 VKDPEVKSFIEKCL 267
+ D + K+ ++K L
Sbjct: 239 IFDKKEKTLLQKLL 252
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 51/301 (16%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G GA+ V A D G +VA ++ QS +R Y E+ LLK ++H N+I
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVA--IKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 94 NSWIDDQNKTVNIITELFTS--------GSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
+ + D+ T++ T+ + G L ++ Q+L GL Y+
Sbjct: 91 DVFTPDE--TLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFL----VYQMLKGLRYI 144
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE--LYD 203
H+ IIHRDLK N+ +N + E+KI D GLA + V+ T + APE L
Sbjct: 145 HAAG--IIHRDLKPGNLAVNED-CELKILDFGLARQADSEMXGXVV-TRWYRAPEVILNW 200
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS-SGIKPAA-LSKVKDPEVKS 261
Y + DI+S G M EM+T + + + Q+ + + +G PA + +++ E K+
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260
Query: 262 F--------------------------IEKCLV-PASQRLSAKELLMDPFLQVNGTTKNR 294
+ +EK LV A QR++A E L P+ + T++
Sbjct: 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDE 320
Query: 295 P 295
P
Sbjct: 321 P 321
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAW-CQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
++ +V+G GAF TVYK G V ++I + P+ E ++ S+ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYL 145
+++R + + T+ ++T+L G L +Y W QI G++YL
Sbjct: 77 PHLVRLLGVCL---SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME----QANAKSVIGTPEFMAPE- 200
++HRDL N+ + + VKI D GLA ++E + NA ++MA E
Sbjct: 134 EERR--LVHRDLAARNVLVK-SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 201 LYDENYNELADIYSFGMCMLEMVTF 225
++ + +D++S+G+ + E++TF
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTF 215
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYS---EVHLLKSL 84
I Y++ IGKG F V+K + VA + + D E +E+ EV ++ +L
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILS---G 141
H NI++ Y + ++ E G L Y R +L G
Sbjct: 81 NHPNIVKLYGL----MHNPPRMVMEFVPCGDL--YHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGE----VKIGDLGLATIMEQANAKSV---IGTP 194
+ Y+ + +PPI+HRDL+ NIF+ K+ D G + Q + SV +G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVSGLLGNF 190
Query: 195 EFMAPELY---DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV--SSGIKPA 249
++MAPE +E+Y E AD YSF M + ++T E P+ E + + G++P
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP- 249
Query: 250 ALSKVKDPEVKSFIEKC 266
+ + P +++ IE C
Sbjct: 250 TIPEDCPPRLRNVIELC 266
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + +G GA+ +V AFD G VA ++ QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 87 NNIIRFYNSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
N+I + + ++ V ++T L G+ QIL GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELY 202
Y+HS D IIHRDLK N+ +N + E+KI D LA + + T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFYLARHTDD-EMTGYVATRWYRAPEIM 194
Query: 203 DE--NYNELADIYSFGMCMLEMVT 224
+YN+ DI+S G M E++T
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 126/259 (48%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 93
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A S +GT ++++PEL
Sbjct: 152 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 264
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+GKG F VY A ++ + +A +V L+ +L EV + L+H NI+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILA-LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ D V +I E G++ + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-ENYNELADI 212
HRD+K +N+ + G+ GE+KI + G + + ++ GT +++ PE+ + ++E D+
Sbjct: 134 HRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 213 YSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 243
+S G+ E + + P+ E + YK++S
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 19/249 (7%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G GA+ +V A+D +VA ++ QS R Y E+ LLK LKH N+I
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVA--VKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 94 NSW-----IDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
+ + I+D ++ V ++T L G+ Q+L GL Y+HS
Sbjct: 86 DVFTPATSIEDFSE-VYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA 142
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NY 206
IIHRDLK N+ +N + E++I D GLA ++ + T + APE+ +Y
Sbjct: 143 G--IIHRDLKPSNVAVNED-CELRILDFGLARQADE-EMTGYVATRWYRAPEIMLNWMHY 198
Query: 207 NELADIYSFGMCMLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 264
N+ DI+S G M E++ + +P S+ + + +V P L+K+ +++I+
Sbjct: 199 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 258
Query: 265 KCLVPASQR 273
L P Q+
Sbjct: 259 S-LPPMPQK 266
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V + G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHKETGNHFAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEYSFKDNSN--LYMVMEYVPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V + G A +
Sbjct: 42 KAKEDFLKKWESPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHKETGNHYAMKILDK 97
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 98 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 154
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 155 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 211
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 212 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 269
Query: 241 KVSSG 245
K+ SG
Sbjct: 270 KIVSG 274
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 19 LETDPTCRYIRYKEV---IGKGAFKTVYKAFDEVNGLE-VAWCQVRIDDVLQS-PEDLER 73
+E D CR + E IG+GA+ V+KA D NG VA +VR+ + P R
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELF--TSGSLRQY--RXXXXXXXXX 129
+ + L++ +H N++R ++ + +T +F L Y +
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 130 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAK 188
Q+L GL +LHSH ++HRDLK NI + + G++K+ D GLA I Q
Sbjct: 121 TIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALT 177
Query: 189 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEM 222
SV+ T + APE L +Y D++S G EM
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
+ V+GKG+F V A + G ++ +V DV+ +D+E +E +L +++
Sbjct: 27 FIRVLGKGSFGKVMLARVKETG-DLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPF 85
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
+ ++ + E G L + +A +I+S L++LH D
Sbjct: 86 LTQLFCCFQTPDRLF-FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH--D 142
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPELYDEN-Y 206
II+RDLK DN+ ++ ++G K+ D G+ I + GTP+++APE+ E Y
Sbjct: 143 KGIIYRDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY 201
Query: 207 NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--IKPAALSKVKDPEVKSFIE 264
D ++ G+ + EM+ P+ E N +++ + + + P L + +KSF+
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPF-EAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMT 260
Query: 265 K 265
K
Sbjct: 261 K 261
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 21 TDPTC---RYIRYKEVIGKGAF-KTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYS 76
+DPT RY++ +G+G F K +D N V+ P+
Sbjct: 1 SDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR 60
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 136
E+ +L++L H +I+++ D K+V ++ E GSLR Y +A+
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-FAQ 119
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----G 192
QI G+ YLH+ IHR L N+ ++ N VKIGD GLA + + + +
Sbjct: 120 QICEGMAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 176
Query: 193 TPEFM-APELYDE-NYNELADIYSFGMCMLEMVTF 225
+P F APE E + +D++SFG+ + E++T+
Sbjct: 177 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTY 211
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 20/219 (9%)
Query: 21 TDPTC---RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
DPT R+++ +G+G F V Y + G +VA ++ + DL++
Sbjct: 1 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK 60
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYR-XXXXXXXXXXXX 132
E+ +L++L H NI+++ +D + +I E SGSL++Y
Sbjct: 61 ---EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 117
Query: 133 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 192
+A QI G+ YL S +HRDL N+ + ++ +VKIGD GL +E +
Sbjct: 118 KYAVQICKGMDYLGSRQ--YVHRDLAARNVLVE-SEHQVKIGDFGLTKAIETDKEXXTVK 174
Query: 193 ----TPEFM-APE-LYDENYNELADIYSFGMCMLEMVTF 225
+P F APE L + +D++SFG+ + E++T+
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY 213
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYS---EVHLLKSL 84
I Y++ IGKG F V+K + VA + + D E +E+ EV ++ +L
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILS---G 141
H NI++ Y + ++ E G L Y R +L G
Sbjct: 81 NHPNIVKLYGL----MHNPPRMVMEFVPCGDL--YHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGE----VKIGDLGLATIMEQANAKSV---IGTP 194
+ Y+ + +PPI+HRDL+ NIF+ K+ D L+ Q + SV +G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVSGLLGNF 190
Query: 195 EFMAPELY---DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV--SSGIKPA 249
++MAPE +E+Y E AD YSF M + ++T E P+ E + + G++P
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP- 249
Query: 250 ALSKVKDPEVKSFIEKC 266
+ + P +++ IE C
Sbjct: 250 TIPEDCPPRLRNVIELC 266
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V + G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHKETGNHFAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEYSFKDNSN--LYMVMEYVPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V + G A +
Sbjct: 22 KAKEDFLKKWESPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V + G A +
Sbjct: 22 KAKEDFLKKWESPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V + G A +
Sbjct: 14 KAKEDFLKKWESPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHKETGNHYAMKILDK 69
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 70 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 126
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 127 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 183
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 184 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 241
Query: 241 KVSSG 245
K+ SG
Sbjct: 242 KIVSG 246
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V + G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHKETGNHFAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEYSFKDNSN--LYMVMEYVPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V + G A +
Sbjct: 22 KAKEDFLKKWESPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ E +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKE-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D GLA
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIQVTDFGLAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 19 LETDPTCRYIRYKEV---IGKGAFKTVYKAFDEVNGLE-VAWCQVRIDDVLQS-PEDLER 73
+E D CR + E IG+GA+ V+KA D NG VA +VR+ + P R
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELF--TSGSLRQY--RXXXXXXXXX 129
+ + L++ +H N++R ++ + +T +F L Y +
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 130 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAK 188
Q+L GL +LHSH ++HRDLK NI + + G++K+ D GLA I Q
Sbjct: 121 TIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALT 177
Query: 189 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEM 222
SV+ T + APE L +Y D++S G EM
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE +APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V + G A +
Sbjct: 14 KAKEDFLKKWESPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHKETGNHYAMKILDK 69
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 70 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 126
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 127 RIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 183
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 184 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 241
Query: 241 KVSSG 245
K+ SG
Sbjct: 242 KIVSG 246
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + + D R + +G G+F V + +G A +
Sbjct: 21 KAKEDFLKKWETPSQNTAQLDQFDRI----KTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++AP + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG-- 192
A I+ L +LHS +IHRD+K N+ IN G+VK+ D G++ + + AK++
Sbjct: 159 AVSIVKALEHLHSK-LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 193 ----TPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP 248
PE + PEL + Y+ +DI+S G+ M+E+ +PY Q K+V P
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 276
Query: 249 AALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFLQVN 288
+ E F +CL S +R + EL+ PF ++
Sbjct: 277 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 317
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 22 DPTC---RYIRYKEVIGKGAF-KTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSE 77
DPT RY++ +G+G F K +D N V+ P+ E
Sbjct: 1 DPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQRE 60
Query: 78 VHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQ 137
+ +L++L H +I+++ D K+V ++ E GSLR Y +A+Q
Sbjct: 61 IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-FAQQ 119
Query: 138 ILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GT 193
I G+ YLH+ IHR L N+ ++ N VKIGD GLA + + + + +
Sbjct: 120 ICEGMAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 176
Query: 194 PEFM-APELYDE-NYNELADIYSFGMCMLEMVTF 225
P F APE E + +D++SFG+ + E++T+
Sbjct: 177 PVFWYAPECLKECKFYYASDVWSFGVTLYELLTY 210
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 92
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 151 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I+ K+ IK + P+ +
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKI---IKLEYDFPEKFFPKARD 263
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 26 RYIRYKEVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYS-EVHL 80
R+++Y +GKG F +V Y + G VA + + S D +R + E+ +
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVA-----VKQLQHSGPDQQRDFQREIQI 61
Query: 81 LKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQIL 139
LK+L + I+++ + ++ E SG LR + + ++ QI
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 121
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE---- 195
G+ YL S +HRDL NI + ++ VKI D GLA ++ V+ P
Sbjct: 122 KGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI 178
Query: 196 -FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ APE L D ++ +D++SFG+ + E+ F Y C SA+ +
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYEL--FTYCDKSCSPSAEFLR 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 22 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + ++ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 7 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 62
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 63 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 119
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 120 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 176
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + ++ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 177 V-KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 234
Query: 241 KVSSG 245
K+ SG
Sbjct: 235 KIVSG 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R IR +G G+F V + G A +
Sbjct: 22 KAKEDFLKKWESPAQNTAHLDQFER-IR---TLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E + +++ +++ S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRIQQAVNFPFLVKLEFSFKDNSN--LYMVLEYAPGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLK 85
+Y + IG+G++ V A + G + +I ED++R E+ ++KSL
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQK--GTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLD 64
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
H NIIR Y ++ D N + ++ EL T G L + + +LS + Y
Sbjct: 65 HPNIIRLYETFED--NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYC 122
Query: 146 HSHDPPIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELY 202
H + + HRDLK +N + +K+ D GLA + ++ +GTP +++P++
Sbjct: 123 HKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 180
Query: 203 DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--IKPAALSKVKDPEVK 260
+ Y D +S G+ M+ ++ YP ++ K+ G P P+ +
Sbjct: 181 EGLYGPECDEWSAGV-MMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAE 239
Query: 261 SFIEKCLVPA-SQRLSAKELL 280
S I + L + QR+++ + L
Sbjct: 240 SLIRRLLTKSPKQRITSLQAL 260
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 15/261 (5%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLK 85
+Y + IG+G++ V A + G + +I ED++R E+ ++KSL
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQK--GTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLD 81
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
H NIIR Y ++ D N + ++ EL T G L + + +LS + Y
Sbjct: 82 HPNIIRLYETFED--NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYC 139
Query: 146 HSHDPPIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELY 202
H + + HRDLK +N + +K+ D GLA + ++ +GTP +++P++
Sbjct: 140 HKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 197
Query: 203 DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--IKPAALSKVKDPEVK 260
+ Y D +S G+ M ++ YP ++ K+ G P P+ +
Sbjct: 198 EGLYGPECDEWSAGVMMYVLLC-GYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAE 256
Query: 261 SFIEKCLVPA-SQRLSAKELL 280
S I + L + QR+++ + L
Sbjct: 257 SLIRRLLTKSPKQRITSLQAL 277
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 126/259 (48%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 90
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A + +GT ++++PEL
Sbjct: 149 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 261
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A
Sbjct: 134 RIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 92
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 151 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I+ K+ IK + P+ +
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKI---IKLEYDFPEKFFPKARD 263
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 92
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 151 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 263
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 93
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 152 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 264
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 89
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A S +GT ++++PEL
Sbjct: 148 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G C++ + P N I++K+ IK + P+ +
Sbjct: 205 EKSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI---IKLEYDFPEKFFPKARD 260
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 261 LVEKLLVLDATKRLGCEEM 279
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 22 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 92
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 151 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 263
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 20/293 (6%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P P ++ Y E +G GAF V++ ++ G +V + + +P L++
Sbjct: 39 PQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATG------RVFVAKFINTPYPLDK 92
Query: 74 --LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL-RQYRXXXXXXXXXX 130
+ +E+ ++ L H +I ++++ +D+ + V +I E + G L +
Sbjct: 93 YTVKNEISIMNQLHHPKLINLHDAF-EDKYEMV-LILEFLSGGELFDRIAAEDYKMSEAE 150
Query: 131 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLATIMEQAN-AK 188
+ RQ GL ++H H I+H D+K +NI + VKI D GLAT + K
Sbjct: 151 VINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208
Query: 189 SVIGTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIYKKVSSG 245
T EF APE+ D E D+++ G+ +++ P++ + + Q K+
Sbjct: 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE 268
Query: 246 IKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVNGTTKNRPLP 297
A S V PE K FI+ L +RL+ + L P+L+ + + +P
Sbjct: 269 FDEDAFSSV-SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIP 320
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 90
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 149 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 261
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 70
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 71 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 128
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 129 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 204 ENYN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 241
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 242 LVEKLLVLDATKRLGCEEM 260
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 90
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 149 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 261
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 22 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 135 RIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 104
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 105 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 159
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 160 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 218
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 219 RIYTHQSDVWSYGVTVWELMTF 240
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 69
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 70 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 127
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 128 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 240
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 241 LVEKLLVLDATKRLGCEEM 259
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 17/254 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G G F V E+ G +VA ++ ++S + + ++ E+ LK +H +II+
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVA-VKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Y + + ++ E + G L Y +QILSG+ Y H H
Sbjct: 81 LYQ--VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH--M 136
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NE 208
++HRDLK +N+ ++ + KI D GL+ +M + G+P + APE+
Sbjct: 137 VVHRDLKPENVLLDAHMN-AKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGP 195
Query: 209 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI--KPAALSKVKDPEVKSFIEKC 266
DI+S G+ + ++ P+ + + ++KK+ GI P L +P V S ++
Sbjct: 196 EVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDGIFYTPQYL----NPSVISLLKHM 250
Query: 267 L-VPASQRLSAKEL 279
L V +R + K++
Sbjct: 251 LQVDPMKRATIKDI 264
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 92
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 151 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 263
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 127/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK GAF V A D+ E V++ + ED
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEED 83
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKI 198
Query: 174 GDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 97
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y + DD+ + +G L +Y + +I+S L YLH
Sbjct: 98 FFVKLYFCFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 156 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 268
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 269 LVEKLLVLDATKRLGCEEM 287
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 83 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 137
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 138 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTF 218
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 82 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 136
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 137 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTF 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 89
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 90 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 144
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 145 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 203
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 204 RIYTHQSDVWSYGVTVWELMTF 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 80 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 134
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTF 215
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+SL+H NI+RF + + + I+ E + G L + + +Q++SG
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGL--ATIMEQANAKSVIGTPEFMA 198
+ Y H+ + HRDLK +N ++G+ +KI D G A+++ + KS +GTP ++A
Sbjct: 128 VSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVL-HSQPKSAVGTPAYIA 184
Query: 199 PE--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS--GIKPAALSKV 254
PE L E ++AD++S G+ + M+ YP+ + K + ++ A V
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYV 244
Query: 255 K-DPEVKSFIEKCLVP-ASQRLSAKEL 279
PE + I + V ++R+S E+
Sbjct: 245 HISPECRHLISRIFVADPAKRISIPEI 271
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 16/225 (7%)
Query: 9 AKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-- 66
A E P+ +L + + K V+G GAF TVYK G +V V I ++ +
Sbjct: 5 ASGEAPNQALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREAT 62
Query: 67 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 125
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 63 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 119
Query: 126 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 182
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 120 IGSQYLLNWCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 176
Query: 183 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 177 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
V+GKG+F V A D E+ ++ DV+ +D+E E +L L +
Sbjct: 26 VLGKGSFGKVMLA-DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 84
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPI 152
+S ++ + + E G L + +A +I GL +LH I
Sbjct: 85 LHSCFQTVDR-LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG--I 141
Query: 153 IHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPELYD-ENYNEL 209
I+RDLK DN+ ++ ++G +KI D G+ +M+ + GTP+++APE+ + Y +
Sbjct: 142 IYRDLKLDNVMLD-SEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKS 200
Query: 210 ADIYSFGMCMLEMVTFEYPY 229
D +++G+ + EM+ + P+
Sbjct: 201 VDWWAYGVLLYEMLAGQPPF 220
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 191
+ QI+SGL +LH + II+RDLK +N+ ++ + G V+I DLGLA ++ Q K
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 229
GTP FMAPE L E Y+ D ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 80 CRLLGICL---TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 134
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTF 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 83 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 137
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 138 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTF 218
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 87 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 141
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 142 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTF 222
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 67
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 68 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 126 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G C++ + P N I++K+ IK + P+ +
Sbjct: 183 EKSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI---IKLEYDFPEKFFPKARD 238
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 239 LVEKLLVLDATKRLGCEEM 257
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 83 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 137
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 138 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTF 218
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 191
+ QI+SGL +LH + II+RDLK +N+ ++ + G V+I DLGLA ++ Q K
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 229
GTP FMAPE L E Y+ D ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 132/315 (41%), Gaps = 34/315 (10%)
Query: 19 LETDPTCRYIRYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL-Y 75
+ D R RY+++ +G+G F TVYKA D+ VA ++++ ++ + + R
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 135
E+ LL+ L H NII +++ N ++++ + + + +
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSN--ISLVFDFMETDLEVIIKDNSLVLTPSHIKAYM 118
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV--IGT 193
L GL YLH H I+HRDLK +N+ ++ N G +K+ D GLA N + T
Sbjct: 119 LMTLQGLEYLHQHW--ILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYXHQVVT 175
Query: 194 PEFMAPELY--DENYNELADIYSFGMCMLEMVTFEYPY----SECRNSAQIYKKVSSGIK 247
+ APEL Y D+++ G C+L + P+ S+ +I++ + + +
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVG-CILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 234
Query: 248 PAALSKVKDPEVKSFIEKCLVPASQRLSAKE----------LLMDPFLQVNGTTK----- 292
P+ +F +P SA L +P ++ T
Sbjct: 235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294
Query: 293 --NRPLPLPDIVLPR 305
NRP P P LPR
Sbjct: 295 FSNRPGPTPGCQLPR 309
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 114/263 (43%), Gaps = 19/263 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+++ IG GA V AFD V G+ VA ++ Q+ +R Y E+ LLK + H
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVA--VKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + Q+L G+
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLL---YQMLCGI 137
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANAKSVIGTPEFMAPE- 200
+LHS IIHRDLK NI + + +KI D GLA T + T + APE
Sbjct: 138 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTASTNFMMTPYVVTRYYRAPEV 194
Query: 201 LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVKDPEV 259
+ Y E DI+S G M E+V + + Q K + G A P V
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 254
Query: 260 KSFIEKCLVPASQRLSAKELLMD 282
++++E PA ++ +EL D
Sbjct: 255 RNYVEN--RPAYPGIAFEELFPD 275
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 29/276 (10%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ----SPEDLERL----YSEVHLLK 82
KE++G+G V + + E A V+I DV S E+++ L EV +L+
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYA---VKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 83 SLK-HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+ H NII+ +++ + N ++ +L G L Y R +L
Sbjct: 79 KVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA-NAKSVIGTPEFMAPE 200
+ LH + I+HRDLK +NI ++ + +K+ D G + ++ +SV GTP ++APE
Sbjct: 137 ICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLRSVCGTPSYLAPE 193
Query: 201 LYD-------ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSK 253
+ + Y + D++S G+ M ++ P+ R + + + SG +
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMIMSGNYQFGSPE 252
Query: 254 VKD--PEVKSFIEKCLVPASQ-RLSAKELLMDPFLQ 286
D VK + + LV Q R +A+E L PF Q
Sbjct: 253 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 68
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 69 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 127 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 204 ENYN-ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 239
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 240 LVEKLLVLDATKRLGCEEM 258
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 191
+ QI+SGL +LH + II+RDLK +N+ ++ + G V+I DLGLA ++ Q K
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 229
GTP FMAPE L E Y+ D ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 22 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ + + S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRILQAVNFPFLTKLEFSFKDNSN--LYMVMEYAPGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 191
+ QI+SGL +LH + II+RDLK +N+ ++ + G V+I DLGLA ++ Q K
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 229
GTP FMAPE L E Y+ D ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 76
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 77 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYL--E 131
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 132 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 190
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 191 RIYTHQSDVWSYGVTVWELMTF 212
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 73
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 74 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 128
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 129 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 188 RIYTHQSDVWSYGVTVWELMTF 209
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 21 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 77 QKVVKLKQ-IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLR 133
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIQVTDFGFAKR 190
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 191 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 241 KVSSG 245
K+ SG
Sbjct: 249 KIVSG 253
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 27 YIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
Y++ +EVIG G F V + + G + + ++ + SE ++ +H
Sbjct: 17 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 76
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYL 145
NIIR + + V I+TE +G+L + R G R I SG+ YL
Sbjct: 77 PNIIRLEG--VVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 134
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTP---EFMA 198
+HRDL NI +N N K+ D GL+ +E+ ++ S +G + A
Sbjct: 135 AEMS--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 199 PE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 234
PE + + +D +S+G+ M E+++F E PY + N
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 131/315 (41%), Gaps = 42/315 (13%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 60
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ + L + +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERMEPVQDLFDFITERGALQEELARSF 119
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 120 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VSS
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 233
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVG 307
E + I CL + S R + +E+ P++Q D++LP+
Sbjct: 234 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQET 271
Query: 308 AFGDRCLMSEGPASV 322
A +S GP+ V
Sbjct: 272 AEIHLHSLSPGPSKV 286
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 80 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 134
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTF 215
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 22/227 (9%)
Query: 71 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 130
+E++Y E+ +LK L H N+++ D + ++ EL G + +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 131 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA--K 188
+ + ++ G+ YLH IIHRD+K N+ + G G +KI D G++ + ++A
Sbjct: 140 RF-YFQDLIKGIEYLHYQK--IIHRDIKPSNLLV-GEDGHIKIADFGVSNEFKGSDALLS 195
Query: 189 SVIGTPEFMAPELYDENYNELA----DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS 244
+ +GTP FMAPE E + D+++ G+ + V + P+ + R + S
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC-----LHS 250
Query: 245 GIKPAALSKVKDPEV----KSFIEKCL--VPASQRLSAKELLMDPFL 285
IK AL P++ K I + L P S R+ E+ + P++
Sbjct: 251 KIKSQALEFPDQPDIAEDLKDLITRMLDKNPES-RIVVPEIKLHPWV 296
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIMELREATSPKANKEILDEAYVMASVDNPHV 113
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 114 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 168
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 169 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 227
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 228 RIYTHQSDVWSYGVTVWELMTF 249
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 127/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK GAF V A D+ E V++ + +D
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 142 XSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKI 198
Query: 174 GDLGLATIMEQANA--KSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 22 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ + + S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRILQAVNFPFLTKLEFSFKDNSN--LYMVMEYAPGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2 ESSEDGAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRI 61
++ ED K E P + D R + +G G+F V G A +
Sbjct: 22 KAKEDFLKKWENPAQNTAHLDQFERI----KTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
Query: 62 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 121
V++ + +E +E +L+++ + + S+ D+ N + ++ E G + +
Sbjct: 78 QKVVKLKQ-IEHTLNEKRILQAVNFPFLTKLEFSFKDNSN--LYMVMEYAPGGEMFSHLR 134
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A
Sbjct: 135 RIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKR 191
Query: 182 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
+ + + GTPE++APE + + YN+ D ++ G+ + EM YP QIY+
Sbjct: 192 V-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 249
Query: 241 KVSSG 245
K+ SG
Sbjct: 250 KIVSG 254
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 74
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 75 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 133 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 245
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 246 LVEKLLVLDATKRLGCEEM 264
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 127/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK GAF V A D+ E V++ + +D
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKI 198
Query: 174 GDLGLATIMEQANA--KSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 12/206 (5%)
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+SL+H NI+RF + + + I+ E + G L + + +Q++SG
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLA-TIMEQANAKSVIGTPEFMAP 199
+ Y H+ + HRDLK +N ++G+ +KI D G + + + + KS +GTP ++AP
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 200 E--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS--GIKPAALSKVK 255
E L E ++AD++S G+ + M+ YP+ + K + ++ A V
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 256 -DPEVKSFIEKCLVP-ASQRLSAKEL 279
PE + I + V ++R+S E+
Sbjct: 246 ISPECRHLISRIFVADPAKRISIPEI 271
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 27 YIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
Y++ +EVIG G F V + + G + + ++ + SE ++ +H
Sbjct: 15 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 74
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYL 145
NIIR + + V I+TE +G+L + R G R I SG+ YL
Sbjct: 75 PNIIRLEG--VVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTP---EFMA 198
+HRDL NI +N N K+ D GL+ +E+ ++ S +G + A
Sbjct: 133 AEMS--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 199 PE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 234
PE + + +D +S+G+ M E+++F E PY + N
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 34/220 (15%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKS-- 83
R I E +GKG + V++ +W + + S D + + E L +
Sbjct: 37 RQITLLECVGKGRYGEVWRG---------SWQGENVAVKIFSSRDEKSWFRETELYNTVM 87
Query: 84 LKHNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
L+H NI+ F S + ++ + + IT GSL Y I SG
Sbjct: 88 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI-VLSIASG 146
Query: 142 LIYLH------SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA-NAKSV---- 190
L +LH P I HRDLK NI + N G+ I DLGLA + Q+ N V
Sbjct: 147 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNP 205
Query: 191 -IGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 222
+GT +MAPE+ DE + DI++FG+ + E+
Sbjct: 206 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG-- 192
A I+ L +LHS +IHRD+K N+ IN G+VK+ D G++ + AK +
Sbjct: 115 AVSIVKALEHLHSK-LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 193 ----TPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP 248
PE + PEL + Y+ +DI+S G+ M+E+ +PY Q K+V P
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 232
Query: 249 AALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFLQVN 288
+ E F +CL S +R + EL+ PF ++
Sbjct: 233 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F T A + E A + +++ + + E ++ L H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 90
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 149 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G + ++V P+ N I++K+ IK + P+ +
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPEKFFPKARD 261
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ +++G+G+F TV A + E A + +++ + + E ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHP 89
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
++ Y ++ DD+ + +G L +Y + +I+S L YLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPELYD 203
IIHRDLK +NI +N + ++I D G A ++ +QA A +GT ++++PEL
Sbjct: 148 KG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSKVKDPEVKS 261
E + + +D+++ G C++ + P N I++K+ IK + P+ +
Sbjct: 205 EKSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI---IKLEYDFPEKFFPKARD 260
Query: 262 FIEKCLV-PASQRLSAKEL 279
+EK LV A++RL +E+
Sbjct: 261 LVEKLLVLDATKRLGCEEM 279
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 127/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK GAF V A D+ E V++ + +D
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIIHLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKI 198
Query: 174 GDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 125/299 (41%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK GAF V A D+ E V++ + +D
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKI 198
Query: 174 GDLGLA----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA I N + ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 199 ADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 16/227 (7%)
Query: 7 GAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ 66
G+ E P+ +L + + K V+G GAF TVYK G +V V I ++ +
Sbjct: 1 GSPSGEAPNQALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELRE 58
Query: 67 --SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXX 123
SP+ + + E +++ S+ + ++ R + TV +I +L G L Y R
Sbjct: 59 ATSPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHK 115
Query: 124 XXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM- 182
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 116 DNIGSQYLLNWCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG 172
Query: 183 ---EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 173 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 219
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 14/213 (6%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G+GA VY+ + G + + VL+ D + + +E+ +L L H NII+
Sbjct: 61 LGRGATSIVYRC--KQKGTQKPYAL----KVLKKTVDKKIVRTEIGVLLRLSHPNIIKLK 114
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
I + ++++ EL T G L +QIL + YLH + I+
Sbjct: 115 E--IFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG--IV 170
Query: 154 HRDLKCDNIFIN--GNQGEVKIGDLGLATIME-QANAKSVIGTPEFMAPE-LYDENYNEL 209
HRDLK +N+ +KI D GL+ I+E Q K+V GTP + APE L Y
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPE 230
Query: 210 ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
D++S G+ ++ P+ + R +++++
Sbjct: 231 VDMWSVGIITYILLCGFEPFYDERGDQFMFRRI 263
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + TV+KA + VA +VR+DD + P R E+ LLK LKH NI+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIV 64
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
R ++ + +K + ++ E + + + Q+L GL + HS +
Sbjct: 65 RLHD--VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLA 179
++HRDLK N+ IN N GE+K+ D GLA
Sbjct: 122 -VLHRDLKPQNLLINRN-GELKLADFGLA 148
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 12/206 (5%)
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+SL+H NI+RF + + + I+ E + G L + + +Q++SG
Sbjct: 69 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 126
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLA-TIMEQANAKSVIGTPEFMAP 199
+ Y H+ + HRDLK +N ++G+ +KI D G + + + + KS +GTP ++AP
Sbjct: 127 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 184
Query: 200 E--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS--GIKPAALSKVK 255
E L E ++AD++S G+ + M+ YP+ + K + ++ A V
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 244
Query: 256 -DPEVKSFIEKCLVP-ASQRLSAKEL 279
PE + I + V ++R+S E+
Sbjct: 245 ISPECRHLISRIFVADPAKRISIPEI 270
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 127/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK GAF V A D+ E V++ + +D
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIITLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKI 198
Query: 174 GDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ----SPEDLERL----YSEVHLLK 82
KE++G+G V + + E A V+I DV S E+++ L EV +L+
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYA---VKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 83 SLK-HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+ H NII+ +++ + N ++ +L G L Y R +L
Sbjct: 79 KVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA-NAKSVIGTPEFMAPE 200
+ LH + I+HRDLK +NI ++ + +K+ D G + ++ + V GTP ++APE
Sbjct: 137 ICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 193
Query: 201 LYD-------ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSK 253
+ + Y + D++S G+ M ++ P+ R + + + SG +
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMIMSGNYQFGSPE 252
Query: 254 VKD--PEVKSFIEKCLVPASQ-RLSAKELLMDPFLQ 286
D VK + + LV Q R +A+E L PF Q
Sbjct: 253 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 33 VIGKGAFKTVY----KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN 88
V+GKG+F V K DE+ +++ ++ D V+Q +D+E E +L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKI----LKKDVVIQD-DDVECTMVEKRVLALPGKPP 402
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
+ +S ++ + + E G L + +A +I GL +L S
Sbjct: 403 FLTQLHSCFQTMDR-LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPELYD-EN 205
II+RDLK DN+ ++ ++G +KI D G+ I + K GTP+++APE+ +
Sbjct: 462 G--IIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 206 YNELADIYSFGMCMLEMVTFEYPY 229
Y + D ++FG+ + EM+ + P+
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +I +L G L Y R W QI G+ YL
Sbjct: 82 CRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 136
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 137 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTF 217
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 30/270 (11%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-EDLERLYSEVHLLKSLKHNNI 89
KE IG G++ + + +E A +V ID + P E++E L L+ +H NI
Sbjct: 32 KETIGVGSYSECKRCVHKATNMEYA-VKV-IDKSKRDPSEEIEIL------LRYGQHPNI 83
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
I + + D K V ++TEL G L I + YLHS
Sbjct: 84 ITLKDVY--DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 150 PPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANAKSVIGTP----EFMAPE-L 201
++HRDLK NI +GN ++I D G A + N ++ TP F+APE L
Sbjct: 142 --VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVL 197
Query: 202 YDENYNELADIYSFGMCMLEMVTFEYPYSECRNSA--QIYKKVSSG---IKPAALSKVKD 256
+ Y+E DI+S G+ + M+ P++ + +I ++ SG + + V +
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 257 PEVKSFIEKCL-VPASQRLSAKELLMDPFL 285
K + K L V QRL+AK++L P++
Sbjct: 258 -TAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +I +L G L Y R W QI G+ YL
Sbjct: 81 CRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 135
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 136 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 195 RIYTHQSDVWSYGVTVWELMTF 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 18/280 (6%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P P ++ D + E +G GAF V++ + G A V + D E
Sbjct: 39 PQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKET 94
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL-RQYRXXXXXXXXXXXX 132
+ E+ + L+H ++ ++++ DD N+ V +I E + G L +
Sbjct: 95 VRKEIQTMSVLRHPTLVNLHDAFEDD-NEMV-MIYEFMSGGELFEKVADEHNKMSEDEAV 152
Query: 133 GWARQILSGLIYLHSHDPPIIHRDLKCDNI-FINGNQGEVKIGDLGLATIME-QANAKSV 190
+ RQ+ GL ++H ++ +H DLK +NI F E+K+ D GL ++ + + K
Sbjct: 153 EYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT 210
Query: 191 IGTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS---GI 246
GT EF APE+ + + D++S G+ +++ P+ N + + V S +
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNM 269
Query: 247 KPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFL 285
+A S + + + K FI K L+ + R++ + L P+L
Sbjct: 270 DDSAFSGISE-DGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +I +L G L Y R W QI G+ YL
Sbjct: 83 CRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 137
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 138 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTF 218
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 32/271 (11%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS--PEDLERLYSEVHLLKSLKHNN 88
KE IG G++ + + +E A V+I D + E++E L L+ +H N
Sbjct: 27 KEDIGVGSYSVCKRCIHKATNMEFA---VKIIDKSKRDPTEEIEIL------LRYGQHPN 77
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
II + + D K V ++TEL G L I + YLH+
Sbjct: 78 IITLKDVY--DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 149 DPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANAKSVIGTP----EFMAPEL 201
++HRDLK NI +GN ++I D G A + N ++ TP F+APE+
Sbjct: 136 G--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--LLMTPCYTANFVAPEV 191
Query: 202 YD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSA--QIYKKVSSG---IKPAALSKVK 255
+ + Y+ DI+S G+ + M+T P++ + +I ++ SG + + V
Sbjct: 192 LERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS 251
Query: 256 DPEVKSFIEKCL-VPASQRLSAKELLMDPFL 285
D K + K L V QRL+A +L P++
Sbjct: 252 D-TAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +I +L G L Y R W QI G+ YL
Sbjct: 81 CRLLGICL---TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 135
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 136 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 195 RIYTHQSDVWSYGVTVWELMTF 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +I +L G L Y R W QI G+ YL
Sbjct: 80 CRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 134
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTF 215
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ----SPEDLERL----YSEVHLLK 82
KE++G+G V + + E A V+I DV S E+++ L EV +L+
Sbjct: 9 KEILGRGVSSVVRRCIHKPTCKEYA---VKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 83 SLK-HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+ H NII+ +++ + N ++ +L G L Y R +L
Sbjct: 66 KVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA-NAKSVIGTPEFMAPE 200
+ LH + I+HRDLK +NI ++ + +K+ D G + ++ + V GTP ++APE
Sbjct: 124 ICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 180
Query: 201 LYD-------ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSK 253
+ + Y + D++S G+ M ++ P+ R + + + SG +
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMIMSGNYQFGSPE 239
Query: 254 VKD--PEVKSFIEKCLVPASQ-RLSAKELLMDPFLQ 286
D VK + + LV Q R +A+E L PF Q
Sbjct: 240 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 30/270 (11%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSP-EDLERLYSEVHLLKSLKHNNI 89
KE IG G++ + + +E A +V ID + P E++E L L+ +H NI
Sbjct: 32 KETIGVGSYSECKRCVHKATNMEYA-VKV-IDKSKRDPSEEIEIL------LRYGQHPNI 83
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
I + + D K V ++TEL G L I + YLHS
Sbjct: 84 ITLKDVY--DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 150 PPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANAKSVIGTP----EFMAPE-L 201
++HRDLK NI +GN ++I D G A + N ++ TP F+APE L
Sbjct: 142 --VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVL 197
Query: 202 YDENYNELADIYSFGMCMLEMVTFEYPYSECRNSA--QIYKKVSSG---IKPAALSKVKD 256
+ Y+E DI+S G+ + M+ P++ + +I ++ SG + + V +
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 257 PEVKSFIEKCL-VPASQRLSAKELLMDPFL 285
K + K L V QRL+AK++L P++
Sbjct: 258 -TAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 16/236 (6%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVH 79
E D +C I+ ++VIG G F V +V G ++ + + SE
Sbjct: 25 EIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEAS 82
Query: 80 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQI 138
++ H NII + + K V IITE +GSL + R G R I
Sbjct: 83 IMGQFDHPNIIHLEG--VVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 140
Query: 139 LSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP-- 194
SG+ YL D +HRDL NI +N N K+ D G++ ++E A + G
Sbjct: 141 GSGMKYLS--DMSAVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIP 197
Query: 195 -EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ APE + + +D++S+G+ M E++++ E PY + N + K + G +
Sbjct: 198 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYR 252
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 82 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 136
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D G A ++ ++ +A+ ++MA E +
Sbjct: 137 DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTF 217
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 22/282 (7%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE--DL 71
P P ++ D + E +G GAF V++ + G A + +P D
Sbjct: 145 PQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFA------AKFVMTPHESDK 198
Query: 72 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL-RQYRXXXXXXXXXX 130
E + E+ + L+H ++ ++++ DD N+ V +I E + G L +
Sbjct: 199 ETVRKEIQTMSVLRHPTLVNLHDAFEDD-NEMV-MIYEFMSGGELFEKVADEHNKMSEDE 256
Query: 131 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNI-FINGNQGEVKIGDLGLATIME-QANAK 188
+ RQ+ GL ++H ++ +H DLK +NI F E+K+ D GL ++ + + K
Sbjct: 257 AVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314
Query: 189 SVIGTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS--- 244
GT EF APE+ + + D++S G+ +++ P+ N + + V S
Sbjct: 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDW 373
Query: 245 GIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFL 285
+ +A S + + + K FI K L+ + R++ + L P+L
Sbjct: 374 NMDDSAFSGISE-DGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 80 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 134
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D G A ++ ++ +A+ ++MA E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTF 215
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 130/315 (41%), Gaps = 42/315 (13%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 60
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 119
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 120 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VSS
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 233
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVG 307
E + I CL + S R + +E+ P++Q D++LP+
Sbjct: 234 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQET 271
Query: 308 AFGDRCLMSEGPASV 322
A +S GP+ V
Sbjct: 272 AEIHLHSLSPGPSKV 286
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 87 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 141
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D G A ++ ++ +A+ ++MA E +
Sbjct: 142 DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTF 222
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 130/315 (41%), Gaps = 42/315 (13%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 61
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 121 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VSS
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 234
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVG 307
E + I CL + S R + +E+ P++Q D++LP+
Sbjct: 235 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQET 272
Query: 308 AFGDRCLMSEGPASV 322
A +S GP+ V
Sbjct: 273 AEIHLHSLSPGPSKV 287
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 38/232 (16%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER-LYSEVHLLKSLK- 85
+R + V+ +G F VY+A D +G E A + +L + E+ R + EV +K L
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYA-----LKRLLSNEEEKNRAIIQEVCFMKKLSG 84
Query: 86 HNNIIRFYNSWI------DDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR--- 136
H NI++F ++ D ++TEL G L ++ +
Sbjct: 85 HPNIVQFCSAASIGKEESDTGQAEFLLLTEL-CKGQLVEFLKKMESRGPLSCDTVLKIFY 143
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ-------ANAKS 189
Q + ++H PPIIHRDLK +N+ ++ NQG +K+ D G AT + A ++
Sbjct: 144 QTCRAVQHMHRQKPPIIHRDLKVENLLLS-NQGTIKLCDFGSATTISHYPDYSWSAQRRA 202
Query: 190 VI-------GTPEFMAPELYDENYN----ELADIYSFGMCMLEMVTF-EYPY 229
++ TP + PE+ D N E DI++ G C+L ++ F ++P+
Sbjct: 203 LVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG-CILYLLCFRQHPF 253
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 127/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK GAF V A D+ E V++ + +D
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N ++I
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMRI 198
Query: 174 GDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+ GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 80 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 134
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTF 215
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 29/260 (11%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
K ++G+G F VYK +G VA +++ ++ Q E + +EV ++ H N++
Sbjct: 43 KNILGRGGFGKVYKG-RLADGTLVAVKRLK-EERXQGGE--LQFQTEVEMISMAVHRNLL 98
Query: 91 RFYNSWIDDQNKTVNIITELFTSGS----LRQYRXXXXXXXXXXXXGWARQILSGLIYLH 146
R + + ++ +GS LR+ A GL YLH
Sbjct: 99 RLRGFCMTPTERL--LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 156
Query: 147 SH-DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN---AKSVIGTPEFMAPE-L 201
H DP IIHRD+K NI ++ + E +GD GLA +M+ + +V GT +APE L
Sbjct: 157 DHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYL 215
Query: 202 YDENYNELADIYSFGMCMLEMVTFEYPYSECR----NSAQIYKKVSSGIKPAALSKV--- 254
+E D++ +G+ +LE++T + + R + + V +K L +
Sbjct: 216 STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 275
Query: 255 ------KDPEVKSFIEKCLV 268
KD EV+ I+ L+
Sbjct: 276 DLQGNYKDEEVEQLIQVALL 295
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+ GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +IT+L G L Y R W QI G+ YL
Sbjct: 87 CRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 141
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 142 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTF 222
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 126/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK G F V A D+ E V++ + +D
Sbjct: 70 LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 129
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 130 LSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGME 187
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 188 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKI 244
Query: 174 GDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 304
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 305 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 358
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 34/220 (15%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKS-- 83
R I E +GKG + V++ +W + + S D + + E L +
Sbjct: 8 RDITLLECVGKGRYGEVWRG---------SWQGENVAVKIFSSRDEKSWFRETELYNTVM 58
Query: 84 LKHNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
L+H NI+ F S + ++ + + IT GSL Y I SG
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI-VLSIASG 117
Query: 142 LIYLH------SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK------S 189
L +LH P I HRDLK NI + N G+ I DLGLA + Q+ +
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 190 VIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 222
+GT +MAPE+ DE + DI++FG+ + E+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 16/236 (6%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVH 79
E D +C I+ ++VIG G F V +V G ++ + + SE
Sbjct: 10 EIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEAS 67
Query: 80 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQI 138
++ H NII + + K V IITE +GSL + R G R I
Sbjct: 68 IMGQFDHPNIIHLEG--VVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 125
Query: 139 LSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP-- 194
SG+ YL D +HRDL NI +N N K+ D G++ ++E A + G
Sbjct: 126 GSGMKYLS--DMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIP 182
Query: 195 -EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ APE + + +D++S+G+ M E++++ E PY + N + K + G +
Sbjct: 183 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYR 237
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D VN + VA ++ + +R E+ +L + +H NII
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLAFRHENIIGI- 88
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 146
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 147 --VLHRDLKPSNLLLN-TTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLS 225
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 122/277 (44%), Gaps = 15/277 (5%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+++G+G++ V + D A ++ + + P + E+ LL+ L+H N+I+
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ +++ + + ++ E G G+ Q++ GL YLHS
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG- 129
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTPEFMAPEL---YD 203
I+H+D+K N+ + G +KI LG+A + A ++ G+P F PE+ D
Sbjct: 130 -IVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLD 187
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFI 263
DI+S G+ + + T YP+ E N ++++ + G A+ P + +
Sbjct: 188 TFSGFKVDIWSAGVTLYNITTGLYPF-EGDNIYKLFENIGKG--SYAIPGDCGPPLSDLL 244
Query: 264 EKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLP 299
+ L ++R S +++ + + P+P+P
Sbjct: 245 KGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIP 281
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 16/236 (6%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVH 79
E D +C I+ ++VIG G F V +V G ++ + + SE
Sbjct: 4 EIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEAS 61
Query: 80 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQI 138
++ H NII + + K V IITE +GSL + R G R I
Sbjct: 62 IMGQFDHPNIIHLEG--VVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 119
Query: 139 LSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP-- 194
SG+ YL D +HRDL NI +N N K+ D G++ ++E A + G
Sbjct: 120 GSGMKYLS--DMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIP 176
Query: 195 -EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ APE + + +D++S+G+ M E++++ E PY + N + K + G +
Sbjct: 177 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYR 231
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 126/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK G F V A D+ E V++ + +D
Sbjct: 16 LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 75
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 76 LSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGME 133
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 134 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKI 190
Query: 174 GDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 191 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 250
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 251 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 304
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 34/218 (15%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKS--LK 85
I E +GKG + V++ +W + + S D + + E L + L+
Sbjct: 10 ITLLECVGKGRYGEVWRG---------SWQGENVAVKIFSSRDEKSWFRETELYNTVMLR 60
Query: 86 HNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLI 143
H NI+ F S + ++ + + IT GSL Y I SGL
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI-VLSIASGLA 119
Query: 144 YLH------SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK------SVI 191
+LH P I HRDLK NI + N G+ I DLGLA + Q+ + +
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 192 GTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 222
GT +MAPE+ DE + DI++FG+ + E+
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 126/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK G F V A D+ E V++ + +D
Sbjct: 13 LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 72
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 73 LSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGME 130
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 131 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKI 187
Query: 174 GDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 188 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 247
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 248 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 301
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + TV+KA + VA +VR+DD + P R E+ LLK LKH NI+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIV 64
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
R ++ + +K + ++ E + + + Q+L GL + HS +
Sbjct: 65 RLHD--VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLA 179
++HRDLK N+ IN N GE+K+ + GLA
Sbjct: 122 -VLHRDLKPQNLLINRN-GELKLANFGLA 148
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 126/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK G F V A D+ E V++ + +D
Sbjct: 11 LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 70
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 71 LSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGME 128
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 129 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTENN-VMKI 185
Query: 174 GDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 186 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 245
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 246 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 299
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D VN + VA ++ + +R E+ +L +H NII
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 106
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V ++T L + + + + QIL GL Y+HS +
Sbjct: 107 NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 164
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 165 --VLHRDLKPSNLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLS 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 42/313 (13%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 75
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 76 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 135 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 192
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VSS
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 248
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVG 307
E + I CL + S R + +E+ P++Q D++LP+
Sbjct: 249 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQET 286
Query: 308 AFGDRCLMSEGPA 320
A +S GP+
Sbjct: 287 AEIHLHSLSPGPS 299
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 42/313 (13%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 76
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 136 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VSS
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 249
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVG 307
E + I CL + S R + +E+ P++Q D++LP+
Sbjct: 250 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQET 287
Query: 308 AFGDRCLMSEGPA 320
A +S GP+
Sbjct: 288 AEIHLHSLSPGPS 300
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 126/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK GAF V A D+ E V++ + +D
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I + G+LR+Y
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVAYASKGNLREYLRARRPPGME 141
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKI 198
Query: 174 GDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 29/279 (10%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 95
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 96 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 155 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 212
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VSS
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 268
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
E + I CL + S R + +E+ P++Q
Sbjct: 269 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D VN + VA ++ + +R E+ +L + +H NII
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLAFRHENIIGI- 88
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 146
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 147 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLS 225
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 33 VIGKGAFKTVY----KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN 88
V+GKG+F V K DE+ +++ ++ D V+Q +D+E E +L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKI----LKKDVVIQD-DDVECTMVEKRVLALPGKPP 81
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
+ +S ++ + + E G L + +A +I GL +L S
Sbjct: 82 FLTQLHSCFQTMDR-LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPELYD-EN 205
II+RDLK DN+ ++ ++G +KI D G+ I + K GTP+++APE+ +
Sbjct: 141 G--IIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 197
Query: 206 YNELADIYSFGMCMLEMVTFEYPY 229
Y + D ++FG+ + EM+ + P+
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G GA+ +V A D+ +G +VA ++ QS +R Y E+ LLK ++H N+I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVA--IKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 94 NSWIDD---QNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ + +N + F L++ + Q+L GL Y+HS
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVY--QMLKGLKYIHSAG- 146
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE--LYDENYNE 208
++HRDLK N+ +N + E+KI D GLA + A + T + APE L +YN+
Sbjct: 147 -VVHRDLKPGNLAVNED-CELKILDFGLARHAD-AEMTGYVVTRWYRAPEVILSWMHYNQ 203
Query: 209 LADIYSFGMCMLEMVT 224
DI+S G M EM+T
Sbjct: 204 TVDIWSVGCIMAEMLT 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 15/238 (6%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G GA+ +V A D+ +G +VA ++ QS +R Y E+ LLK ++H N+I
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVA--IKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 94 NSWIDD---QNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ + +N + F L++ + Q+L GL Y+HS
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVY--QMLKGLKYIHSAG- 164
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE--LYDENYNE 208
++HRDLK N+ +N + E+KI D GLA + A + T + APE L +YN+
Sbjct: 165 -VVHRDLKPGNLAVNED-CELKILDFGLARHAD-AEMTGYVVTRWYRAPEVILSWMHYNQ 221
Query: 209 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYK--KVSSGIKPAALSKVKDPEVKSFIE 264
DI+S G M EM+T + + Q+ + KV+ + K+ D KS+I+
Sbjct: 222 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ 279
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 23/250 (9%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVH 79
E + +C I + VIG G F V ++ G ++ V + + E
Sbjct: 18 EIEASC--ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEAS 75
Query: 80 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQI 138
++ H NII + ++K V I+TE +GSL + + G R I
Sbjct: 76 IMGQFDHPNIIHLEG--VVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGI 133
Query: 139 LSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP-- 194
+G+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 134 SAGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 195 -EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK---- 247
+ APE + + +D++S+G+ M E+V++ E PY E N + K V G +
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQ-DVIKAVEEGYRLPSP 249
Query: 248 ---PAALSKV 254
PAAL ++
Sbjct: 250 MDCPAALYQL 259
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 42/313 (13%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 61
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 121 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VSS
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 234
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVG 307
E + I CL + S R + +E+ P++Q D++LP+
Sbjct: 235 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQET 272
Query: 308 AFGDRCLMSEGPA 320
A +S GP+
Sbjct: 273 AEIHLHSLSPGPS 285
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 12/206 (5%)
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+SL+H NI+RF + + + I+ E + G L + + +Q++SG
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLA-TIMEQANAKSVIGTPEFMAP 199
+ Y H+ + HRDLK +N ++G+ +KI G + + + + KS +GTP ++AP
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 200 E--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS--GIKPAALSKVK 255
E L E ++AD++S G+ + M+ YP+ + K + ++ A V
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 256 -DPEVKSFIEKCLVP-ASQRLSAKEL 279
PE + I + V ++R+S E+
Sbjct: 246 ISPECRHLISRIFVADPAKRISIPEI 271
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 133/325 (40%), Gaps = 46/325 (14%)
Query: 8 AAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDV 64
A K+ P E +P + ++G G F +VY + L VA V RI D
Sbjct: 22 ATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 77
Query: 65 LQSPEDLERLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX 122
+ P R+ EV LLK + + +IR + W + + V I+ L +
Sbjct: 78 GELPNG-TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITE 135
Query: 123 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM 182
+ Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G ++
Sbjct: 136 RGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 183 EQANAKSVIGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSA 236
+ GT + PE Y + A ++S G+ + +MV + P+ R
Sbjct: 194 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV 253
Query: 237 QIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRP 295
++VSS E + I CL + S R + +E+ P++Q
Sbjct: 254 FFRQRVSS-------------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ--------- 291
Query: 296 LPLPDIVLPRVGAFGDRCLMSEGPA 320
D++LP+ A +S GP+
Sbjct: 292 ----DVLLPQETAEIHLHSLSPGPS 312
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 126/299 (42%), Gaps = 45/299 (15%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPED 70
L DP + R K +GK GAF V A D+ E V++ + +D
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 71 LERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY---------- 119
L L SE+ ++K + KH NII + Q+ + +I + G+LR+Y
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVGYASKGNLREYLRARRPPGME 141
Query: 120 ------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 173
R Q+ G+ YL S IHRDL N+ + N +KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKI 198
Query: 174 GDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF--- 225
D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 226 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLMD 282
YP ++ K+ KPA + E+ + C VP SQR + K+L+ D
Sbjct: 259 PYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 21/242 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I +V+G G F V ++ + ++ V + + E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
NIIR + ++K V I+TE +GSL + R G R I SG+ YL
Sbjct: 107 NIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP---EFMAPE- 200
D +HRDL NI IN N K+ D GLA ++E A + G + +PE
Sbjct: 165 --DMGYVHRDLAARNILINSNL-VCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 201 LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK-------PAALS 252
+ + +D++S+G+ + E++++ E PY E N + K V G + PAAL
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALY 280
Query: 253 KV 254
++
Sbjct: 281 QL 282
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 33 VIGKGAFKTVY---KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
V+GKG + V+ K G A ++ ++++ +D +E ++L+ +KH I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
+ ++ + +I E + G L + +I L +LH
Sbjct: 84 VDLIYAF--QTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPE-LYDENY 206
II+RDLK +NI +N +QG VK+ D GL +I + + GT E+MAPE L +
Sbjct: 142 --IIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 207 NELADIYSFGMCMLEMVTFEYPYS 230
N D +S G M +M+T P++
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 17/225 (7%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVH 79
E D +C ++ ++VIG G F V ++ G + ++ + + SE
Sbjct: 29 EIDISC--VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEAS 86
Query: 80 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQI 138
++ H N+I + ++ V IITE +GSL + R G R I
Sbjct: 87 IMGQFDHPNVIHLEG--VVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI 144
Query: 139 LSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTP 194
+G+ YL D +HRDL NI +N N K+ D GL+ +E + S +G
Sbjct: 145 AAGMKYLA--DMNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGK 201
Query: 195 ---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 234
+ APE + + +D++S+G+ M E++++ E PY + N
Sbjct: 202 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 22 DPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLL 81
D RY+ K +G G V+ A D VA ++ VL P+ ++ E+ ++
Sbjct: 8 DLGSRYMDLKP-LGCGGNGLVFSAVDNDCDKRVAIKKI----VLTDPQSVKHALREIKII 62
Query: 82 KSLKHNNIIRFY-------NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX---- 130
+ L H+NI++ + + DD V +TEL + +++Y
Sbjct: 63 RRLDHDNIVKVFEILGPSGSQLTDD----VGSLTELNSVYIVQEYMETDLANVLEQGPLL 118
Query: 131 ---XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME---- 183
+ Q+L GL Y+HS + ++HRDLK N+FIN +KIGD GLA IM+
Sbjct: 119 EEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYS 176
Query: 184 -QANAKSVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMVT 224
+ + + T + +P L NY + D+++ G EM+T
Sbjct: 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 133/325 (40%), Gaps = 46/325 (14%)
Query: 8 AAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDV 64
A K+ P E +P + ++G G F +VY + L VA V RI D
Sbjct: 37 ATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 92
Query: 65 LQSPEDLERLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX 122
+ P R+ EV LLK + + +IR + W + + V I+ L +
Sbjct: 93 GELPNG-TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITE 150
Query: 123 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM 182
+ Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G ++
Sbjct: 151 RGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 208
Query: 183 EQANAKSVIGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSA 236
+ GT + PE Y + A ++S G+ + +MV + P+ R
Sbjct: 209 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV 268
Query: 237 QIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRP 295
++VSS E + I CL + S R + +E+ P++Q
Sbjct: 269 FFRQRVSS-------------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ--------- 306
Query: 296 LPLPDIVLPRVGAFGDRCLMSEGPA 320
D++LP+ A +S GP+
Sbjct: 307 ----DVLLPQETAEIHLHSLSPGPS 327
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA +R + +R E+ +L +H NII
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVA---IRKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 90
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 148
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 149 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLS 227
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA + G A ++R++ + P R E+ +LK LKH+NI+
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIV 63
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ Y+ + K + ++ E + + Q+L+G+ Y HD
Sbjct: 64 KLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY--CHDR 119
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV--IGTPEFMAPELY--DENY 206
++HRDLK N+ IN +GE+KI D GLA K I T + AP++ + Y
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 207 NELADIYSFGMCMLEMV 223
+ DI+S G EMV
Sbjct: 179 STTIDIWSVGCIFAEMV 195
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G+G+F V++ D+ G + A +VR++ V ++ E+ L I+ Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE-VFRA--------EELMACAGLTSPRIVPLY 151
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ + VNI EL GSL Q + Q L GL YLHS I+
Sbjct: 152 GA--VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR--IL 207
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAKSVI------GTPEFMAPE-LYDEN 205
H D+K DN+ ++ + + D G A ++ KS++ GT MAPE + +
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSE 231
+ D++S ML M+ +P+++
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHPWTQ 293
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER-LYSEVHLLKSLKHNN 88
+ EV+G GAF V+ + G A + + +SP + L +E+ +LK +KH N
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFA-----LKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
I+ + I + ++ +L + G L +Q+LS + YLH +
Sbjct: 68 IVTLED--IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 149 DPPIIHRDLKCDNIFING--NQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN- 205
I+HRDLK +N+ ++ I D GL+ + + + GTP ++APE+ +
Sbjct: 126 G--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
Y++ D +S G+ ++ P+ E +++++K+ G
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYE-ETESKLFEKIKEG 222
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 29/283 (10%)
Query: 16 PDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLE 72
P + E +P + ++G G F +VY + L VA V RI D + P
Sbjct: 21 PHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-T 79
Query: 73 RLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 130
R+ EV LLK + + +IR + W + + V I+ L +
Sbjct: 80 RVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEEL 138
Query: 131 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV 190
+ Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++
Sbjct: 139 ARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 196
Query: 191 IGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSS 244
GT + PE Y + A ++S G+ + +MV + P+ R ++VS
Sbjct: 197 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX 256
Query: 245 GIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
E + I CL + S R + +E+ P++Q
Sbjct: 257 -------------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D VN + VA ++ + +R E+ +L +H NII
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 106
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 107 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 164
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 165 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLS 243
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 42/313 (13%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 61
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 121 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VSS
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 234
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVG 307
E + I CL + S R + +E+ P++Q D++LP+
Sbjct: 235 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQET 272
Query: 308 AFGDRCLMSEGPA 320
A +S GP+
Sbjct: 273 AEIHLHSLSPGPS 285
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +I +L G L Y R W QI G+ YL
Sbjct: 82 CRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 136
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D G A ++ ++ +A+ ++MA E +
Sbjct: 137 DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTF 217
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D VN + VA ++ + +R E+ +L +H NII
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 88
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 146
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 147 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLS 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D VN + VA ++ + +R E+ +L +H NII
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 94
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 95 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 152
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 153 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D VN + VA ++ + +R E+ +L +H NII
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 86
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 144
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 145 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLS 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 26/202 (12%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G+G + TVYK ++ VA ++R++ +P R EV LLK LKH NI+ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR---EVSLLKDLKHANIVTLH 66
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG-WARQILSGLIYLHSHDPPI 152
+ I K++ ++ E + L+QY + Q+L GL Y H +
Sbjct: 67 D--IIHTEKSLTLVFE-YLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK--V 121
Query: 153 IHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV--------IGTPEFMAPE--LY 202
+HRDLK N+ IN +GE+K+ D GL A AKS+ + T + P+ L
Sbjct: 122 LHRDLKPQNLLIN-ERGELKLADFGL------ARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+Y+ D++ G EM T
Sbjct: 175 STDYSTQIDMWGVGCIFYEMAT 196
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D VN + VA ++ + +R E+ +L +H NII
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 86
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 144
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 145 --VLHRDLKPSNLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLS 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D VN + VA ++ + +R E+ +L +H NII
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHENIIGI- 86
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 144
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 145 --VLHRDLKPSNLLLNTTX-DLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLS 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D VN + VA ++ + +R E+ +L +H NII
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 86
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 144
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 145 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLS 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +I +L G L Y R W QI G+ YL
Sbjct: 82 CRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 136
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D G A ++ ++ +A+ ++MA E +
Sbjct: 137 DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTF 217
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D VN + VA ++ + +R E+ +L +H NII
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHENIIGI- 86
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 144
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 145 --VLHRDLKPSNLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLS 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 105/245 (42%), Gaps = 17/245 (6%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+++ IG GA V AFD V G+ VA ++ Q+ +R Y E+ LLK + H
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVA--VKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLL---YQMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANAKSVIGTPEFMAPE- 200
+LHS IIHRDLK NI + + +KI D GLA T + T + APE
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTACTNFMMTPYVVTRYYRAPEV 196
Query: 201 LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVKDPEV 259
+ Y DI+S G M E+V + + Q K + G A P V
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 256
Query: 260 KSFIE 264
++++E
Sbjct: 257 RNYVE 261
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 21/242 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I +V+G G F V ++ + ++ V + + E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
NIIR + ++K V I+TE +GSL + R G R I SG+ YL
Sbjct: 107 NIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP---EFMAPE- 200
D +HRDL NI IN N K+ D GL+ ++E A + G + +PE
Sbjct: 165 --DMGFVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 201 LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK-------PAALS 252
+ + +D++S+G+ + E++++ E PY E N + K V G + PAAL
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALY 280
Query: 253 KV 254
++
Sbjct: 281 QL 282
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA + G A ++R++ + P R E+ +LK LKH+NI+
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIV 63
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ Y+ + K + ++ E + + Q+L+G+ Y HD
Sbjct: 64 KLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY--CHDR 119
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV--IGTPEFMAPELY--DENY 206
++HRDLK N+ IN +GE+KI D GLA K + T + AP++ + Y
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 207 NELADIYSFGMCMLEMV 223
+ DI+S G EMV
Sbjct: 179 STTIDIWSVGCIFAEMV 195
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E IG+G + VYKA + G A ++R++ + P R E+ +LK LKH+NI+
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIV 63
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ Y+ + K + ++ E + + Q+L+G+ Y HD
Sbjct: 64 KLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY--CHDR 119
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV--IGTPEFMAPELY--DENY 206
++HRDLK N+ IN +GE+KI D GLA K + T + AP++ + Y
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 207 NELADIYSFGMCMLEMV 223
+ DI+S G EMV
Sbjct: 179 STTIDIWSVGCIFAEMV 195
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLY---SEVHLLK 82
R I +E IGKG F V++ + G EVA V+I S E ER + +E++
Sbjct: 42 RTIVLQESIGKGRFGEVWRG--KWRGEEVA---VKI---FSSRE--ERSWFREAEIYQTV 91
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXXXXXGWAR 136
L+H NI+ F I NK T+L+ GSL Y A
Sbjct: 92 MLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLAL 146
Query: 137 QILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN---- 186
SGL +LH P I HRDLK NI + N G I DLGLA + A
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTID 205
Query: 187 --AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 222
+GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 206 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+G GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +I +L G L Y R W QI G+ YL
Sbjct: 84 CRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL--E 138
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D G A ++ ++ +A+ ++MA E +
Sbjct: 139 DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTF 219
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNI 89
+V+ GAF TVYK G +V V I ++ + SP+ + + E +++ S+ + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSH 148
R + TV +I +L G L Y R W QI G+ YL
Sbjct: 87 CRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 141
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPEFMAPE-LYD 203
D ++HRDL N+ + Q VKI D GLA ++ ++ +A+ ++MA E +
Sbjct: 142 DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 204 ENYNELADIYSFGMCMLEMVTF 225
Y +D++S+G+ + E++TF
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTF 222
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 33 VIGKGAFKTVY---KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
V+GKG + V+ K G A ++ ++++ +D +E ++L+ +KH I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
+ ++ + +I E + G L + +I L +LH
Sbjct: 84 VDLIYAF--QTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPE-LYDENY 206
II+RDLK +NI +N +QG VK+ D GL +I + GT E+MAPE L +
Sbjct: 142 --IIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 207 NELADIYSFGMCMLEMVTFEYPYS 230
N D +S G M +M+T P++
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPELYD 203
H H II+RDLK +NI ++ +G +K+ D GL+ +I + A S GT E+MAPE+ +
Sbjct: 142 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIYKKVSSGIKPAALSKVKDPEVK 260
+ + AD +SFG+ M EM+T P+ + + + + K G+ P LS PE +
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM-PQFLS----PEAQ 255
Query: 261 SFI 263
S +
Sbjct: 256 SLL 258
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV---- 190
A I+ L +LHS +IHRD+K N+ IN G+VK D G++ + AK +
Sbjct: 142 AVSIVKALEHLHSK-LSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGC 199
Query: 191 --IGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP 248
PE + PEL + Y+ +DI+S G+ +E+ +PY Q K+V P
Sbjct: 200 KPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSP 259
Query: 249 AALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFLQVN 288
+ E F +CL S +R + EL PF ++
Sbjct: 260 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLH 300
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLY---SEVHLLK 82
R I +E IGKG F V++ + G EVA + S E ER + +E++
Sbjct: 29 RTIVLQESIGKGRFGEVWRG--KWRGEEVA------VKIFSSRE--ERSWFREAEIYQTV 78
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXXXXXGWAR 136
L+H NI+ F I NK T+L+ GSL Y A
Sbjct: 79 MLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLAL 133
Query: 137 QILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN---- 186
SGL +LH P I HRDLK NI + N G I DLGLA + A
Sbjct: 134 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTID 192
Query: 187 --AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 222
+GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 193 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPELYD 203
H H II+RDLK +NI ++ +G +K+ D GL+ +I + A S GT E+MAPE+ +
Sbjct: 141 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIYKKVSSGIKPAALSKVKDPEVK 260
+ + AD +SFG+ M EM+T P+ + + + + K G+ P LS PE +
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM-PQFLS----PEAQ 254
Query: 261 SFI 263
S +
Sbjct: 255 SLL 257
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 70 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX 129
++ ++ E+ +++ L+H ++ + S+ D+++ + ++ +L G LR +
Sbjct: 58 EVRNVFKELQIMQGLEHPFLVNLWYSFQDEED--MFMVVDLLLGGDLRYHLQQNVHFKEE 115
Query: 130 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-EQANAK 188
+ +++ L YL + IIHRD+K DNI ++ G V I D +A ++ +
Sbjct: 116 TVKLFICELVMALDYLQNQR--IIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQIT 172
Query: 189 SVIGTPEFMAPELYDE----NYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIYKKV 242
++ GT +MAPE++ Y+ D +S G+ E++ PY +S +I
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
Query: 243 SSGI--KPAALSKVKDPEVKSFIEKCLVP-ASQRLS 275
+ + P+A S+ E+ S ++K L P QR S
Sbjct: 233 ETTVVTYPSAWSQ----EMVSLLKKLLEPNPDQRFS 264
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 29/279 (10%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 59
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 60 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 118
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 119 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 176
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VSS
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 232
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQ 286
E + I CL + S R + +E+ P++Q
Sbjct: 233 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 21/242 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I +V+G G F V ++ + ++ V + + E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
NIIR + ++K V I+TE +GSL + R G R I SG+ YL
Sbjct: 107 NIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP---EFMAPE- 200
D +HRDL NI IN N K+ D GL+ ++E A + G + +PE
Sbjct: 165 --DMGAVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 201 LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK-------PAALS 252
+ + +D++S+G+ + E++++ E PY E N + K V G + PAAL
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALY 280
Query: 253 KV 254
++
Sbjct: 281 QL 282
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 29/266 (10%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYSEVHLLKSLK--HN 87
++G G F +VY + L VA V RI D + P R+ EV LLK + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
+IR + W + + V I+ L + + Q+L + H
Sbjct: 70 GVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV--RHC 126
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YDEN 205
H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEVKS 261
+ A ++S G+ + +MV + P+ R ++VSS E +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------ECQH 233
Query: 262 FIEKCL-VPASQRLSAKELLMDPFLQ 286
I CL + S R + +E+ P++Q
Sbjct: 234 LIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPELYD 203
H H II+RDLK +NI ++ +G +K+ D GL+ +I + A S GT E+MAPE+ +
Sbjct: 141 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 204 E-NYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIYKKVSSGIKPAALSKVKDPEVK 260
+ + AD +SFG+ M EM+T P+ + + + + K G+ P LS PE +
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM-PQFLS----PEAQ 254
Query: 261 SFI 263
S +
Sbjct: 255 SLL 257
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLY---SEVHLLK 82
R I +E IGKG F V++ + G EVA + S E ER + +E++
Sbjct: 4 RTIVLQESIGKGRFGEVWRG--KWRGEEVA------VKIFSSRE--ERSWFREAEIYQTV 53
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXXXXXGWAR 136
L+H NI+ F I NK T+L+ GSL Y A
Sbjct: 54 MLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLAL 108
Query: 137 QILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN---- 186
SGL +LH P I HRDLK NI + N G I DLGLA + A
Sbjct: 109 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTID 167
Query: 187 --AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 222
+GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 168 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 29/260 (11%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
K ++G+G F VYK +G VA +++ ++ Q E + +EV ++ H N++
Sbjct: 35 KNILGRGGFGKVYKG-RLADGXLVAVKRLK-EERTQGGE--LQFQTEVEMISMAVHRNLL 90
Query: 91 RFYNSWIDDQNKTVNIITELFTSGS----LRQYRXXXXXXXXXXXXGWARQILSGLIYLH 146
R + + ++ +GS LR+ A GL YLH
Sbjct: 91 RLRGFCMTPTERL--LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148
Query: 147 SH-DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN---AKSVIGTPEFMAPE-L 201
H DP IIHRD+K NI ++ + E +GD GLA +M+ + +V G +APE L
Sbjct: 149 DHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYL 207
Query: 202 YDENYNELADIYSFGMCMLEMVTFEYPYSECR----NSAQIYKKVSSGIKPAALSKV--- 254
+E D++ +G+ +LE++T + + R + + V +K L +
Sbjct: 208 STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 267
Query: 255 ------KDPEVKSFIEKCLV 268
KD EV+ I+ L+
Sbjct: 268 DLQGNYKDEEVEQLIQVALL 287
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 128/313 (40%), Gaps = 42/313 (13%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 75
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 76 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 135 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 192
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VS
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX---- 248
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVG 307
E + I CL + S R + +E+ P++Q D++LP+
Sbjct: 249 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQET 286
Query: 308 AFGDRCLMSEGPA 320
A +S GP+
Sbjct: 287 AEIHLHSLSPGPS 299
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 16/244 (6%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHL-LKSLKHNNIIRF 92
+G G V+K G +A Q+R + E+ +R+ ++ + LKS I++
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSG---NKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPI 152
+ ++I N V I EL + + + + I+ L YL +
Sbjct: 90 FGTFI--TNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG-V 146
Query: 153 IHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELYDE------N 205
IHRD+K NI ++ +G++K+ D G++ + AK G +MAPE D +
Sbjct: 147 IHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPD 205
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK-DPEVKSFIE 264
Y+ AD++S G+ ++E+ T ++PY C+ ++ KV P + + +SF++
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVK 265
Query: 265 KCLV 268
CL
Sbjct: 266 DCLT 269
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 21/242 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I +V+G G F V ++ + ++ V + + E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
NIIR + ++K V I+TE +GSL + R G R I SG+ YL
Sbjct: 107 NIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP---EFMAPE- 200
D +HRDL NI IN N K+ D GL+ ++E A + G + +PE
Sbjct: 165 --DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 201 LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK-------PAALS 252
+ + +D++S+G+ + E++++ E PY E N + K V G + PAAL
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALY 280
Query: 253 KV 254
++
Sbjct: 281 QL 282
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLY---SEVHLLK 82
R I +E IGKG F V++ + G EVA + S E ER + +E++
Sbjct: 9 RTIVLQESIGKGRFGEVWRG--KWRGEEVA------VKIFSSRE--ERSWFREAEIYQTV 58
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXXXXXGWAR 136
L+H NI+ F I NK T+L+ GSL Y A
Sbjct: 59 MLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLAL 113
Query: 137 QILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN---- 186
SGL +LH P I HRDLK NI + N G I DLGLA + A
Sbjct: 114 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTID 172
Query: 187 --AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 222
+GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 173 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 128/313 (40%), Gaps = 42/313 (13%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 76
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 136 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VS
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX---- 249
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVG 307
E + I CL + S R + +E+ P++Q D++LP+
Sbjct: 250 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQET 287
Query: 308 AFGDRCLMSEGPA 320
A +S GP+
Sbjct: 288 AEIHLHSLSPGPS 300
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 136/325 (41%), Gaps = 46/325 (14%)
Query: 8 AAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDV 64
A K+ P E +P + ++G G F +VY + L VA V RI D
Sbjct: 23 ATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 78
Query: 65 LQSPEDLERLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX 122
+ P R+ EV LLK + + +IR + W + + V I+ L +
Sbjct: 79 GELPNG-TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITE 136
Query: 123 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM 182
+ Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G ++
Sbjct: 137 RGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 183 EQANAKSVIGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQI 238
+ GT + PE Y + A ++S G+ + +MV + P+ E Q+
Sbjct: 195 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQV 254
Query: 239 Y--KKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRP 295
+ ++VSS E + I CL + S R + +E+ P++Q
Sbjct: 255 FFRQRVSS-------------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ--------- 292
Query: 296 LPLPDIVLPRVGAFGDRCLMSEGPA 320
D++LP+ A +S GP+
Sbjct: 293 ----DVLLPQETAEIHLHSLSPGPS 313
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 21/242 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I +V+G G F V ++ + ++ V + + E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
NIIR + ++K V I+TE +GSL + R G R I SG+ YL
Sbjct: 107 NIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP---EFMAPE- 200
D +HRDL NI IN N K+ D GL+ ++E A + G + +PE
Sbjct: 165 --DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 201 LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK-------PAALS 252
+ + +D++S+G+ + E++++ E PY E N + K V G + PAAL
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALY 280
Query: 253 KV 254
++
Sbjct: 281 QL 282
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 21/242 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I +V+G G F V ++ + ++ V + + E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
NIIR + ++K V I+TE +GSL + R G R I SG+ YL
Sbjct: 107 NIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP---EFMAPE- 200
D +HRDL NI IN N K+ D GL+ ++E A + G + +PE
Sbjct: 165 --DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 201 LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK-------PAALS 252
+ + +D++S+G+ + E++++ E PY E N + K V G + PAAL
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALY 280
Query: 253 KV 254
++
Sbjct: 281 QL 282
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 136/325 (41%), Gaps = 46/325 (14%)
Query: 8 AAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDV 64
A K+ P E +P + ++G G F +VY + L VA V RI D
Sbjct: 22 ATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 77
Query: 65 LQSPEDLERLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX 122
+ P R+ EV LLK + + +IR + W + + V I+ L +
Sbjct: 78 GELPNG-TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITE 135
Query: 123 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM 182
+ Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G ++
Sbjct: 136 RGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 183 EQANAKSVIGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQI 238
+ GT + PE Y + A ++S G+ + +MV + P+ E Q+
Sbjct: 194 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQV 253
Query: 239 Y--KKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRP 295
+ ++VSS E + I CL + S R + +E+ P++Q
Sbjct: 254 FFRQRVSS-------------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ--------- 291
Query: 296 LPLPDIVLPRVGAFGDRCLMSEGPA 320
D++LP+ A +S GP+
Sbjct: 292 ----DVLLPQETAEIHLHSLSPGPS 312
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 136/325 (41%), Gaps = 46/325 (14%)
Query: 8 AAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDV 64
A K+ P E +P + ++G G F +VY + L VA V RI D
Sbjct: 23 ATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 78
Query: 65 LQSPEDLERLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX 122
+ P R+ EV LLK + + +IR + W + + V I+ L +
Sbjct: 79 GELPNG-TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITE 136
Query: 123 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM 182
+ Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G ++
Sbjct: 137 RGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 183 EQANAKSVIGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQI 238
+ GT + PE Y + A ++S G+ + +MV + P+ E Q+
Sbjct: 195 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQV 254
Query: 239 Y--KKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRP 295
+ ++VSS E + I CL + S R + +E+ P++Q
Sbjct: 255 FFRQRVSS-------------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ--------- 292
Query: 296 LPLPDIVLPRVGAFGDRCLMSEGPA 320
D++LP+ A +S GP+
Sbjct: 293 ----DVLLPQETAEIHLHSLSPGPS 313
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 21/242 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I +V+G G F V ++ + ++ V + + E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
NIIR + ++K V I+TE +GSL + R G R I SG+ YL
Sbjct: 107 NIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP---EFMAPE- 200
D +HRDL NI IN N K+ D GL ++E A + G + +PE
Sbjct: 165 --DMGYVHRDLAARNILINSNL-VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 201 LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK-------PAALS 252
+ + +D++S+G+ + E++++ E PY E N + K V G + PAAL
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALY 280
Query: 253 KV 254
++
Sbjct: 281 QL 282
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLY---SEVHLLK 82
R I +E IGKG F V++ + G EVA + S E ER + +E++
Sbjct: 3 RTIVLQESIGKGRFGEVWRG--KWRGEEVA------VKIFSSRE--ERSWFREAEIYQTV 52
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXXXXXGWAR 136
L+H NI+ F I NK T+L+ GSL Y A
Sbjct: 53 MLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLAL 107
Query: 137 QILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN---- 186
SGL +LH P I HRDLK NI + N G I DLGLA + A
Sbjct: 108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTID 166
Query: 187 --AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 222
+GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 167 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 132/325 (40%), Gaps = 46/325 (14%)
Query: 8 AAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDV 64
A K+ P E +P + ++G G F +VY + L VA V RI D
Sbjct: 42 ATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 97
Query: 65 LQSPEDLERLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX 122
+ P R+ EV LLK + + +IR + W + + V I+ L +
Sbjct: 98 GELPNG-TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITE 155
Query: 123 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM 182
+ Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G ++
Sbjct: 156 RGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 213
Query: 183 EQANAKSVIGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSA 236
+ GT + PE Y + A ++S G+ + +MV + P+ R
Sbjct: 214 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV 273
Query: 237 QIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRP 295
++VS E + I CL + S R + +E+ P++Q
Sbjct: 274 FFRQRVSX-------------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ--------- 311
Query: 296 LPLPDIVLPRVGAFGDRCLMSEGPA 320
D++LP+ A +S GP+
Sbjct: 312 ----DVLLPQETAEIHLHSLSPGPS 332
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLY---SEVHLLK 82
R I +E IGKG F V++ + G EVA + S E ER + +E++
Sbjct: 6 RTIVLQESIGKGRFGEVWRG--KWRGEEVA------VKIFSSRE--ERSWFREAEIYQTV 55
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXXXXXGWAR 136
L+H NI+ F I NK T+L+ GSL Y A
Sbjct: 56 MLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLAL 110
Query: 137 QILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN---- 186
SGL +LH P I HRDLK NI + N G I DLGLA + A
Sbjct: 111 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTID 169
Query: 187 --AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 222
+GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 170 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 21/242 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I +V+G G F V ++ + ++ V + + E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
NIIR + ++K V I+TE +GSL + R G R I SG+ YL
Sbjct: 107 NIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP---EFMAPE- 200
D +HRDL NI IN N K+ D GL+ ++E A + G + +PE
Sbjct: 165 --DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 201 LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK-------PAALS 252
+ + +D++S+G+ + E++++ E PY E N + K V G + PAAL
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALY 280
Query: 253 KV 254
++
Sbjct: 281 QL 282
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 125/292 (42%), Gaps = 47/292 (16%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN-NII 90
E++G+GA+ V A NG E A V+I + Q+ R++ EV L + N NI+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYA---VKIIEK-QAGHSRSRVFREVETLYQCQGNKNIL 74
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ DD ++ E GS+ + R + + L +LH+
Sbjct: 75 ELIEFFEDDTR--FYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG- 131
Query: 151 PIIHRDLKCDNIFINGNQ--GEVKIGDLGLATIMEQANAKSVIGTP---------EFMAP 199
I HRDLK +NI + VKI D L + M+ N+ + I TP E+MAP
Sbjct: 132 -IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 200 ELYD------ENYNELADIYSFGMCMLEMVTFEYPY----------------SECRNSAQ 237
E+ + Y++ D++S G+ + M++ P+ C+N +
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN--K 248
Query: 238 IYKKVSSGIK--PAALSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQ 286
+++ + G P E K I K LV A QRLSA ++L P++Q
Sbjct: 249 LFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 21/242 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I +V+G G F V ++ + ++ V + + E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
NIIR + ++K V I+TE +GSL + R G R I SG+ YL
Sbjct: 107 NIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP---EFMAPE- 200
D +HRDL NI IN N K+ D GL+ ++E A + G + +PE
Sbjct: 165 --DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 201 LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK-------PAALS 252
+ + +D++S+G+ + E++++ E PY E N + K V G + PAAL
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALY 280
Query: 253 KV 254
++
Sbjct: 281 QL 282
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 135
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 84 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 141
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 193
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 142 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 194 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 247
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 257
Query: 248 ------PAALSKV 254
PAAL ++
Sbjct: 258 PPPMDCPAALYQL 270
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA ++ + +R E+ +L +H NII
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 84
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 142
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 143 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLS 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 126/319 (39%), Gaps = 61/319 (19%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
K ++G+GA+ V A + G VA ++ D P R E+ +LK KH NII
Sbjct: 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENII 72
Query: 91 RFYNSWIDDQNKTVN---IITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
+N D + N II EL + R + Q L + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY--FIYQTLRAVKVLHG 130
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------------EQANAKSVIGTPE 195
+ +IHRDLK N+ IN N ++K+ D GLA I+ +Q+ + T
Sbjct: 131 SN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW 187
Query: 196 FMAPE--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQ----IYKKVSSGIKPA 249
+ APE L Y+ D++S G C+L + P R+ I+ + +
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 250 ALSKVKDPEVKSFIEKC-LVPA--------------------------SQRLSAKELLMD 282
L ++ P + +I+ + PA ++R++AKE L
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 283 PFLQV----NGTTKNRPLP 297
P+LQ N + P+P
Sbjct: 307 PYLQTYHDPNDEPEGEPIP 325
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA ++ + +R E+ +L +H NII
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 84
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 142
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 143 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLS 221
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 21/242 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I +V+G G F V ++ + ++ V + + E ++ H
Sbjct: 45 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
NIIR + ++K V I+TE +GSL + R G R I SG+ YL
Sbjct: 105 NIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 162
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGTP---EFMAPE- 200
D +HRDL NI IN N K+ D GL+ ++E A + G + +PE
Sbjct: 163 --DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 219
Query: 201 LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK-------PAALS 252
+ + +D++S+G+ + E++++ E PY E N + K V G + PAAL
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALY 278
Query: 253 KV 254
++
Sbjct: 279 QL 280
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA ++ + +R E+ +L +H NII
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 90
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 148
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 149 --VLHRDLKPSNLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLS 227
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 136/325 (41%), Gaps = 46/325 (14%)
Query: 8 AAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDV 64
A K+ P E +P + ++G G F +VY + L VA V RI D
Sbjct: 22 ATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 77
Query: 65 LQSPEDLERLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX 122
+ P R+ EV LLK + + +IR + W + + V I+ L +
Sbjct: 78 GELPNG-TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITE 135
Query: 123 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM 182
+ Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G ++
Sbjct: 136 RGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 183 EQANAKSVIGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQI 238
+ GT + PE Y + A ++S G+ + +MV + P+ E Q+
Sbjct: 194 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQV 253
Query: 239 Y--KKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRP 295
+ ++VSS E + I CL + S R + +E+ P++Q
Sbjct: 254 FFRQRVSS-------------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ--------- 291
Query: 296 LPLPDIVLPRVGAFGDRCLMSEGPA 320
D++LP+ A +S GP+
Sbjct: 292 ----DVLLPQETAEIHLHSLSPGPS 312
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA ++ + +R E+ +L +H NII
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 91
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 149
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 150 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA ++ + +R E+ +L +H NII
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 92
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 93 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 150
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 151 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA ++ + +R E+ +L +H NII
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 83
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 84 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 141
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 142 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLS 220
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 135
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 67 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 193
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 125 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 194 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 247
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 240
Query: 248 ------PAALSKV 254
PAAL ++
Sbjct: 241 PPPMDCPAALYQL 253
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA ++ + +R E+ +L +H NII
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 90
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 148
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 149 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLS 227
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
+SL+H NI+RF + + + I+ E + G L + + +Q++SG
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLA-TIMEQANAKSVIGTPEFMAP 199
+ Y H+ + HRDLK +N ++G+ +KI G + + + + K +GTP ++AP
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAP 185
Query: 200 E--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS--GIKPAALSKVK 255
E L E ++AD++S G+ + M+ YP+ + K + ++ A V
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 256 -DPEVKSFIEKCLVP-ASQRLSAKEL 279
PE + I + V ++R+S E+
Sbjct: 246 ISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 135
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 67 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 193
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 125 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 194 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 247
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 240
Query: 248 ------PAALSKV 254
PAAL ++
Sbjct: 241 PPPMDCPAALYQL 253
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA ++ + +R E+ +L +H NII
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYXQRTLREIKILLRFRHENIIGI- 90
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 148
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 149 --VLHRDLKPSNLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLS 227
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA ++ + +R E+ +L +H NII
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 90
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 148
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 149 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA ++ + +R E+ +L +H NII
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 91
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN 149
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 150 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLS 228
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 126/319 (39%), Gaps = 61/319 (19%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
K ++G+GA+ V A + G VA ++ D P R E+ +LK KH NII
Sbjct: 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENII 72
Query: 91 RFYNSWIDDQNKTVN---IITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
+N D + N II EL + R + Q L + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY--FIYQTLRAVKVLHG 130
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------------EQANAKSVIGTPE 195
+ +IHRDLK N+ IN N ++K+ D GLA I+ +Q+ + T
Sbjct: 131 SN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW 187
Query: 196 FMAPE--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQ----IYKKVSSGIKPA 249
+ APE L Y+ D++S G C+L + P R+ I+ + +
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 250 ALSKVKDPEVKSFIEKC-LVPA--------------------------SQRLSAKELLMD 282
L ++ P + +I+ + PA ++R++AKE L
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 283 PFLQV----NGTTKNRPLP 297
P+LQ N + P+P
Sbjct: 307 PYLQTYHDPNDEPEGEPIP 325
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G+G+F V++ D+ G + A +VR++ V ++ E+ L I+ Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE-VFRA--------EELMACAGLTSPRIVPLY 132
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 153
+ + VNI EL GSL Q + Q L GL YLHS I+
Sbjct: 133 GA--VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR--IL 188
Query: 154 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQ-------ANAKSVIGTPEFMAPE-LYDEN 205
H D+K DN+ ++ + + D G A ++ + GT MAPE + +
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSE 231
+ D++S ML M+ +P+++
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHPWTQ 274
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 28 IRYKEVIGKGAFKTVYKA--FDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLK 85
+R +V+G G F TV+K E +++ C I+D + + + + + SL
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK-SGRQSFQAVTDHMLAIGSLD 91
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSL----RQYRXXXXXXXXXXXXGWARQILSG 141
H +I+R ++ ++T+ GSL RQ+R W QI G
Sbjct: 92 HAHIVRLLGL---CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLL---NWGVQIAKG 145
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK---SVIGTP-EFM 197
+ YL H ++HR+L N+ + + +V++ D G+A ++ + + S TP ++M
Sbjct: 146 MYYLEEHG--MVHRNLAARNVLLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECR 233
A E ++ Y +D++S+G+ + E++TF PY+ R
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 240
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 128/313 (40%), Gaps = 42/313 (13%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 103
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 104 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 163 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 220
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKP 248
+ PE Y + A ++S G+ + +MV + P+ R ++VS
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX---- 276
Query: 249 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVG 307
E + I CL + S R + +E+ P++Q D++LP+
Sbjct: 277 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQET 314
Query: 308 AFGDRCLMSEGPA 320
A +S GP+
Sbjct: 315 AEIHLHSLSPGPS 327
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 128/319 (40%), Gaps = 61/319 (19%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
K ++G+GA+ V A + G VA ++ D P R E+ +LK KH NII
Sbjct: 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENII 72
Query: 91 RFYNSWIDDQNKTVN---IITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
+N D + N II EL + R + Q L + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY--FIYQTLRAVKVLHG 130
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS------------VIGTPE 195
+ +IHRDLK N+ IN N ++K+ D GLA I++++ A + + T
Sbjct: 131 SN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187
Query: 196 FMAPE--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQ----IYKKVSSGIKPA 249
+ APE L Y+ D++S G C+L + P R+ I+ + +
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 250 ALSKVKDPEVKSFIEKC-LVPA--------------------------SQRLSAKELLMD 282
L ++ P + +I+ + PA ++R++AKE L
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 283 PFLQV----NGTTKNRPLP 297
P+LQ N + P+P
Sbjct: 307 PYLQTYHDPNDEPEGEPIP 325
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKAFDEVNGLE------VAWCQVRIDDVLQSP 68
L DP R + V+GK GAF V A E GL+ V V++ +
Sbjct: 17 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATE 74
Query: 69 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 119
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 120 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 133 LEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 189
Query: 172 KIGDLGLATIMEQANA--KSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 225
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 190 KIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 226 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 281
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 304
Query: 282 D 282
D
Sbjct: 305 D 305
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXXXXXXXXXXXXG 133
+E++ ++H NI+ F + I + IT+ +GSL Y
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDY-LKSTTLDAKSMLK 138
Query: 134 WARQILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-IMEQAN 186
A +SGL +LH+ P I HRDLK NI + N G I DLGLA + N
Sbjct: 139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVKFISDTN 197
Query: 187 AKSV-----IGTPEFMAPELYDENYNE-------LADIYSFGMCMLEM 222
+ +GT +M PE+ DE+ N +AD+YSFG+ + E+
Sbjct: 198 EVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ V A+D +N + VA ++ + +R E+ +L +H NII
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 90
Query: 94 NSWID----DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
N I +Q K V I+ +L + + + + QIL GL Y+HS +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY--FLYQILRGLKYIHSAN 148
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LY 202
++HRDLK N+ +N ++KI D GLA + + + + + T + APE L
Sbjct: 149 --VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ Y + DI+S G + EM++
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLS 227
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 20/266 (7%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
IG+GA+ +V K + +G +A RI + E + L +++S I++FY
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMA--VKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH---DP 150
+ + + I EL ++ + Y+ +I + +H +
Sbjct: 88 GALFREGD--CWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL 145
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELYD-----E 204
IIHRD+K NI ++ G +K+ D G++ + + AK+ G +MAPE D +
Sbjct: 146 KIIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 205 NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD----PEVK 260
Y+ +D++S G+ + E+ T +PY + + +V G P LS ++ P
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG-DPPQLSNSEEREFSPSFI 263
Query: 261 SFIEKCLVP-ASQRLSAKELLMDPFL 285
+F+ CL S+R KELL PF+
Sbjct: 264 NFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G G F V ++ G +VA ++ ++S + + ++ E+ LK +H +II+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVA-VKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Y + ++ E + G L Y +QILS + Y H H
Sbjct: 76 LYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH--M 131
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NE 208
++HRDLK +N+ ++ + KI D GL+ +M ++ G+P + APE+
Sbjct: 132 VVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 209 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI 246
DI+S G+ + ++ P+ + + ++KK+ G+
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDD-EHVPTLFKKIRGGV 227
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 32/271 (11%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS--PEDLERLYSEVHLLKSLKHNN 88
KE IG G++ + + E A V+I D + E++E L L+ +H N
Sbjct: 27 KEDIGVGSYSVCKRCIHKATNXEFA---VKIIDKSKRDPTEEIEIL------LRYGQHPN 77
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
II + + D K V ++TEL G L I + YLH+
Sbjct: 78 IITLKDVY--DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 149 DPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANAKSVIGTP----EFMAPEL 201
++HRDLK NI +GN ++I D G A + N ++ TP F+APE+
Sbjct: 136 G--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--LLXTPCYTANFVAPEV 191
Query: 202 YD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSA--QIYKKVSSG---IKPAALSKVK 255
+ + Y+ DI+S G+ + +T P++ + +I ++ SG + + V
Sbjct: 192 LERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS 251
Query: 256 DPEVKSFIEKCL-VPASQRLSAKELLMDPFL 285
D K + K L V QRL+A +L P++
Sbjct: 252 D-TAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 28 IRYKEVIGKGAFKTVYKA--FDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLK 85
+R +V+G G F TV+K E +++ C I+D + + + + + SL
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK-SGRQSFQAVTDHMLAIGSLD 73
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSL----RQYRXXXXXXXXXXXXGWARQILSG 141
H +I+R ++ ++T+ GSL RQ+R W QI G
Sbjct: 74 HAHIVRLLGL---CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLL---NWGVQIAKG 127
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM---EQANAKSVIGTP-EFM 197
+ YL H ++HR+L N+ + + +V++ D G+A ++ ++ S TP ++M
Sbjct: 128 MYYLEEHG--MVHRNLAARNVLLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECR 233
A E ++ Y +D++S+G+ + E++TF PY+ R
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 222
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL-KHNNIIR 91
+IGKG+F V KA+D V E W ++I + L + EV LL+ + KH+ ++
Sbjct: 42 LIGKGSFGQVVKAYDRV---EQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTEMK 96
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQY----RXXXXXXXXXXXXGWARQILSGLIYLHS 147
+Y + N + +F S Y +A+Q+ + L++L +
Sbjct: 97 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 156
Query: 148 HDPPIIHRDLKCDNIFI-NGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDEN 205
+ IIH DLK +NI + N + +KI D G + + Q I + + +PE L
Sbjct: 157 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-RIYQXIQSRFYRSPEVLLGMP 215
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVKDPEVKSFIE 264
Y+ D++S G ++EM T E +S Q+ K V GI PA + + P+ + F E
Sbjct: 216 YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKFFE 274
Query: 265 K 265
K
Sbjct: 275 K 275
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 17/293 (5%)
Query: 21 TDPTCRYIRYK--EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEV 78
T P+ RY+ E++G G V+ A D + +VA +R D + + P R E
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD-LARDPSFYLRFRREA 63
Query: 79 HLLKSLKHNNIIRFYNSWIDD--QNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 136
+L H I+ Y++ + I+ E +LR
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVI 191
L + SH IIHRD+K NI I+ VK+ D G+A I + N+ +VI
Sbjct: 124 DACQALNF--SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPA 249
GT ++++PE ++ + +D+YS G + E++T E P++ + Y+ V I P+
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPS 240
Query: 250 ALSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNGTTKNRPLPLPD 300
A + ++ + + K L P ++ +A E+ D NG P L D
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTD 293
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I+ + +G G F V+ + N +VA + + ++ E +L+K+L+H+
Sbjct: 15 IKLVKRLGAGQFGEVWMGYYN-NSTKVA-----VKTLKPGTMSVQAFLEEANLMKTLQHD 68
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
++R Y + + + + IITE GSL + ++ QI G+ Y+
Sbjct: 69 KLVRLYA--VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 126
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ N+ ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 127 ERKN--YIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 183
Query: 203 DEN-YNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ + +D++SFG+ + E+VT+ + PY R +A + +S G +
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVTYGKIPYP-GRTNADVMTALSQGYR 229
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 19/242 (7%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVH 79
E D +C I+ + VIG G F V ++ G ++ V + + E
Sbjct: 39 ELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEAS 96
Query: 80 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQI 138
++ H N++ + + K V I+ E +G+L + R G R I
Sbjct: 97 IMGQFDHPNVVHLEG--VVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGI 154
Query: 139 LSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP---- 194
+G+ YL D +HRDL NI +N N K+ D GL+ ++E + ++V T
Sbjct: 155 AAGMRYLA--DMGYVHRDLAARNILVNSNL-VCKVSDFGLSRVIED-DPEAVYTTTGGKI 210
Query: 195 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK-PA 249
+ APE + + +D++S+G+ M E++++ E PY + N + K + G + PA
Sbjct: 211 PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLPA 269
Query: 250 AL 251
+
Sbjct: 270 PM 271
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPELYD 203
H H II+RDLK +NI ++ +G +K+ D GL+ I + A S GT E+MAPE+ +
Sbjct: 145 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 204 -ENYNELADIYSFGMCMLEMVTFEYPY 229
+ ++ AD +S+G+ M EM+T P+
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 29/266 (10%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYSEVHLLKSLK--HN 87
++G G F +VY + L VA V RI D + P R+ EV LLK + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
+IR + W + + V I+ L + + Q+L + H
Sbjct: 70 GVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV--RHC 126
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YDEN 205
H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEVKS 261
+ A ++S G+ + +MV + P+ R ++VS E +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX-------------ECQH 233
Query: 262 FIEKCL-VPASQRLSAKELLMDPFLQ 286
I CL + S R + +E+ P++Q
Sbjct: 234 LIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL-KHNNIIR 91
+IGKG+F V KA+D V E W ++I + L + EV LL+ + KH+ ++
Sbjct: 61 LIGKGSFGQVVKAYDRV---EQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQY----RXXXXXXXXXXXXGWARQILSGLIYLHS 147
+Y + N + +F S Y +A+Q+ + L++L +
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 148 HDPPIIHRDLKCDNIFI-NGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDEN 205
+ IIH DLK +NI + N + +KI D G + + Q I + + +PE L
Sbjct: 176 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-RIYQXIQSRFYRSPEVLLGMP 234
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVKDPEVKSFIE 264
Y+ D++S G ++EM T E +S Q+ K V GI PA + + P+ + F E
Sbjct: 235 YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKFFE 293
Query: 265 K 265
K
Sbjct: 294 K 294
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 10 KMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE 69
K++P D + E ++ ++ +G+G+F V++ D+ G + A +VR++
Sbjct: 45 KLKPVDYEYREE---VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----- 96
Query: 70 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX 129
+E L + L I+ Y + + VNI EL GSL Q
Sbjct: 97 RVEELVA----CAGLSSPRIVPLYGA--VREGPWVNIFMELLEGGSLGQLIKQMGCLPED 150
Query: 130 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAK 188
+ Q L GL YLH+ I+H D+K DN+ ++ + + D G A ++ K
Sbjct: 151 RALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208
Query: 189 SVI------GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSE 231
S++ GT MAPE + + + DI+S ML M+ +P+++
Sbjct: 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 33 VIGKGAFKTVY----KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN 88
VIG+G++ V K D + + V ++ DD ED++ + +E H+ + ++
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-----EDIDWVQTEKHVFEQASNHP 113
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
+ +S +++ +I E G L + ++ +I L YLH
Sbjct: 114 FLVGLHSCFQTESRLFFVI-EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 172
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPE-LYDEN 205
II+RDLK DN+ ++ ++G +K+ D G+ + + GTP ++APE L E+
Sbjct: 173 G--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED 229
Query: 206 YNELADIYSFGMCMLEMVTFEYPY 229
Y D ++ G+ M EM+ P+
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 114/251 (45%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL + + + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE-----FM 197
+LHS IIHRDLK NI + + +KI D GLA + S + PE +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMEPEVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + PA + K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPG-RDYIDQWNKVIEQLGTPCPAFMKK 251
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 252 LQ-PTVRNYVE 261
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 17/225 (7%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVH 79
E D +C ++ ++VIG G F V ++ G + ++ + + SE
Sbjct: 3 EIDISC--VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEAS 60
Query: 80 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQI 138
++ H N+I + ++ V IITE +GSL + R G R I
Sbjct: 61 IMGQFDHPNVIHLEG--VVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI 118
Query: 139 LSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVIGTP 194
+G+ YL D +HR L NI +N N K+ D GL+ +E + S +G
Sbjct: 119 AAGMKYLA--DMNYVHRALAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGK 175
Query: 195 ---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 234
+ APE + + +D++S+G+ M E++++ E PY + N
Sbjct: 176 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 220
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 130/289 (44%), Gaps = 30/289 (10%)
Query: 12 EPPDPDVLETDPTCR---YIRYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ 66
EPP LE C +Y + +G GAF V+ A D+ EV ++ + VL+
Sbjct: 5 EPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLE 64
Query: 67 SP--ED--LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSG-SLRQYRX 121
ED L ++ E+ +L ++H NII+ + I + ++ E SG L +
Sbjct: 65 DCWIEDPKLGKVTLEIAILSRVEHANIIKVLD--IFENQGFFQLVMEKHGSGLDLFAFID 122
Query: 122 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 181
RQ++S + YL D IIHRD+K +NI I +K+ D G A
Sbjct: 123 RHPRLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVI-AEDFTIKLIDFGSAAY 179
Query: 182 MEQANA-KSVIGTPEFMAPELYDEN-YN--ELADIYSFGMCMLEMVTFEYPYSECRNSAQ 237
+E+ + GT E+ APE+ N Y EL +++S G+ + +V E P+ E +
Sbjct: 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPEL-EMWSLGVTLYTLVFEENPFCELEET-- 236
Query: 238 IYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQRLSAKE-LLMDPFL 285
V + I P L E+ S + L P +R + E L+ DP++
Sbjct: 237 ----VEAAIHPPYLV---SKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 10/218 (4%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G G F V ++ G +VA ++ ++S + + ++ E+ LK +H +II+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVA-VKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
Y + ++ E + G L Y +QILS + Y H H
Sbjct: 76 LYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH--M 131
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NE 208
++HRDLK +N+ ++ + KI D GL+ +M + G+P + APE+
Sbjct: 132 VVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 209 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI 246
DI+S G+ + ++ P+ + + ++KK+ G+
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDD-EHVPTLFKKIRGGV 227
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL-KHNNIIR 91
+IGKG+F V KA+D V E W ++I + L + EV LL+ + KH+ ++
Sbjct: 61 LIGKGSFGQVVKAYDRV---EQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQY----RXXXXXXXXXXXXGWARQILSGLIYLHS 147
+Y + N + +F S Y +A+Q+ + L++L +
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 148 HDPPIIHRDLKCDNIFI-NGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDEN 205
+ IIH DLK +NI + N + +KI D G + + Q I + + +PE L
Sbjct: 176 PELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ-RIYQXIQSRFYRSPEVLLGMP 234
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVKDPEVKSFIE 264
Y+ D++S G ++EM T E +S Q+ K V GI PA + + P+ + F E
Sbjct: 235 YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKFFE 293
Query: 265 K 265
K
Sbjct: 294 K 294
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 8 AAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDV 64
A K+ P E +P + ++G G F +VY + L VA V RI D
Sbjct: 23 ATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 78
Query: 65 LQSPEDLERLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX 122
+ P R+ EV LLK + + +IR + W + + V I+ L +
Sbjct: 79 GELPNG-TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITE 136
Query: 123 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM 182
+ Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G ++
Sbjct: 137 RGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 183 EQANAKSVIGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPY 229
+ GT + PE Y + A ++S G+ + +MV + P+
Sbjct: 195 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 17/293 (5%)
Query: 21 TDPTCRYIRYK--EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEV 78
T P+ RY+ E++G G V+ A D + +VA +R D + + P R E
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD-LARDPSFYLRFRREA 63
Query: 79 HLLKSLKHNNIIRFYNSWIDD--QNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 136
+L H I+ Y++ + I+ E +LR
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVI 191
L + SH IIHRD+K NI I+ VK+ D G+A I + N+ +VI
Sbjct: 124 DACQALNF--SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPA 249
GT ++++PE ++ + +D+YS G + E++T E P++ + Y+ V I P+
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
Query: 250 ALSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNGTTKNRPLPLPD 300
A + ++ + + K L P ++ +A E+ D NG P L D
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTD 293
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 29/266 (10%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYSEVHLLKSLK--HN 87
++G G F +VY + L VA V RI D + P R+ EV LLK + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
+IR + W + + V I+ L + + Q+L + H
Sbjct: 70 GVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV--RHC 126
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YDEN 205
H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 206 YNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIY--KKVSSGIKPAALSKVKDPEVKS 261
+ A ++S G+ + +MV + P+ E Q++ ++VSS E +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS-------------ECQH 233
Query: 262 FIEKCL-VPASQRLSAKELLMDPFLQ 286
I CL + S R + +E+ P++Q
Sbjct: 234 LIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 10 KMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE 69
K++P D + E ++ ++ +G+G+F V++ D+ G + A +VR++
Sbjct: 61 KLKPVDYEYREE---VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----- 112
Query: 70 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX 129
+E L + L I+ Y + + VNI EL GSL Q
Sbjct: 113 RVEELVA----CAGLSSPRIVPLYGA--VREGPWVNIFMELLEGGSLGQLIKQMGCLPED 166
Query: 130 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAK 188
+ Q L GL YLH+ I+H D+K DN+ ++ + + D G A ++ K
Sbjct: 167 RALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 224
Query: 189 SVI------GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSE 231
S++ GT MAPE + + + DI+S ML M+ +P+++
Sbjct: 225 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 11/217 (5%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDVLQSPEDLERLYS 76
E +P + ++G G F +VY + L VA V RI D + P R+
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 76
Query: 77 EVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
EV LLK + + +IR + W + + V I+ L + +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT
Sbjct: 136 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 195 EFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPY 229
+ PE Y + A ++S G+ + +MV + P+
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 17/293 (5%)
Query: 21 TDPTCRYIRYK--EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEV 78
T P+ RY+ E++G G V+ A D + +VA +R D + + P R E
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD-LARDPSFYLRFRREA 63
Query: 79 HLLKSLKHNNIIRFYNSWIDD--QNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 136
+L H I+ Y++ + I+ E +LR
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVI 191
L + SH IIHRD+K NI I+ VK+ D G+A I + N+ +VI
Sbjct: 124 DACQALNF--SHQNGIIHRDVKPANILISATNA-VKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPA 249
GT ++++PE ++ + +D+YS G + E++T E P++ + Y+ V I P+
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
Query: 250 ALSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNGTTKNRPLPLPD 300
A + ++ + + K L P ++ +A E+ D NG P L D
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTD 293
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 24/207 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL + + + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE-----FM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TPE +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPEVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMV 223
APE + Y E DI+S G M EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 13/276 (4%)
Query: 16 PDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLY 75
PD+L T +GKG F VY A ++ + VA +V ++ +L
Sbjct: 13 PDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVA-LKVLFKSQIEKEGVEHQLR 71
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 135
E+ + L H NI+R YN + D + + +I E G L +
Sbjct: 72 REIEIQAHLHHPNILRLYNYFYD--RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIM 129
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE 195
++ L+Y H +IHRD+K +N+ + G +GE+KI D G + K++ GT +
Sbjct: 130 EELADALMYCHGKK--VIHRDIKPENL-LLGLKGELKIADFGWSVHAPSLRRKTMCGTLD 186
Query: 196 FMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK-PAALSK 253
++ PE+ + +NE D++ G+ E++ P+ ++ + V +K PA++
Sbjct: 187 YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPT 246
Query: 254 VKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVN 288
+ I K L S+RL ++ P+++ N
Sbjct: 247 ----GAQDLISKLLRHNPSERLPLAQVSAHPWVRAN 278
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 20/246 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I+ + +G G F V+ + N +VA + + ++ E +L+K+L+H+
Sbjct: 14 IKLVKKLGAGQFGEVWMGYYN-NSTKVA-----VKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
++R Y + + + + IITE GSL + ++ QI G+ Y+
Sbjct: 68 KLVRLYA--VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 125
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ N+ ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 126 ERKN--YIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 182
Query: 203 DEN-YNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVK 260
+ + ++++SFG+ + E+VT+ + PY R +A + +S G + + D E+
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVTYGKIPYP-GRTNADVMSALSQGYRMPRMENCPD-ELY 240
Query: 261 SFIEKC 266
++ C
Sbjct: 241 DIMKMC 246
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKAFDEVNGLE------VAWCQVRIDDVLQSP 68
L DP R + V+GK GAF V A E GL+ V V++ +
Sbjct: 6 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATE 63
Query: 69 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 119
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 64 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 121
Query: 120 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 122 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 178
Query: 172 KIGDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 225
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 179 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 238
Query: 226 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 281
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 239 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 293
Query: 282 D 282
D
Sbjct: 294 D 294
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLK 85
+ +KE +G GAF V A ++ G A + L+ E + +E+ +L+ +K
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFA-VKCIPKKALKGKES--SIENEIAVLRKIK 78
Query: 86 HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 145
H NI+ + I + + ++ +L + G L RQ+L + YL
Sbjct: 79 HENIVALED--IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYL 136
Query: 146 HSHDPPIIHRDLKCDNI--FINGNQGEVKIGDLGLATIMEQANAKS-VIGTPEFMAPELY 202
H I+HRDLK +N+ + + ++ I D GL+ + + + S GTP ++APE+
Sbjct: 137 HRMG--IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVL 194
Query: 203 DEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
+ Y++ D +S G+ ++ P+ + N +++++++
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCGYPPFYD-ENDSKLFEQI 234
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKAFDEVNGLE------VAWCQVRIDDVLQSP 68
L DP R + V+GK GAF V A E GL+ V V++ +
Sbjct: 9 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATE 66
Query: 69 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 119
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 67 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 124
Query: 120 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 125 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 181
Query: 172 KIGDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 225
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 182 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 241
Query: 226 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 281
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 242 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 296
Query: 282 D 282
D
Sbjct: 297 D 297
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 8 AAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDV 64
A K+ P E +P + ++G G F +VY + L VA V RI D
Sbjct: 23 ATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 78
Query: 65 LQSPEDLERLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX 122
+ P R+ EV LLK + + +IR + W + + V I+ L +
Sbjct: 79 GELPNG-TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITE 136
Query: 123 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM 182
+ Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G ++
Sbjct: 137 RGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 183 EQANAKSVIGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPY 229
+ GT + PE Y + A ++S G+ + +MV + P+
Sbjct: 195 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKAFDEVNGLE------VAWCQVRIDDVLQSP 68
L DP R + V+GK GAF V A E GL+ V V++ +
Sbjct: 17 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATE 74
Query: 69 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 119
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 120 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 133 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 189
Query: 172 KIGDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 225
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 226 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 281
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 304
Query: 282 D 282
D
Sbjct: 305 D 305
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKAFDEVNGLE------VAWCQVRIDDVLQSP 68
L DP R + V+GK GAF V A E GL+ V V++ +
Sbjct: 17 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATE 74
Query: 69 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 119
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQAREPPG 132
Query: 120 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 189
Query: 172 KIGDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 225
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 226 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 281
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 304
Query: 282 D 282
D
Sbjct: 305 D 305
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY ++ IG+GA+ V A+D V VA ++ + +R E+ +L +H
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVA---IKKISPFEHQTYCQRTLREIQILLRFRH 100
Query: 87 NNIIRF---YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLI 143
N+I + + + V I+ +L + + + + QIL GL
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY--FLYQILRGLK 158
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMA 198
Y+HS + ++HRDLK N+ IN ++KI D GLA I + + + + T + A
Sbjct: 159 YIHSAN--VLHRDLKPSNLLIN-TTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 199 PE--LYDENYNELADIYSFGMCMLEMVT 224
PE L + Y + DI+S G + EM++
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 8 AAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQV---RIDDV 64
A K+ P E +P + ++G G F +VY + L VA V RI D
Sbjct: 22 ATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 77
Query: 65 LQSPEDLERLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX 122
+ P R+ EV LLK + + +IR + W + + V I+ L +
Sbjct: 78 GELPNG-TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITE 135
Query: 123 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM 182
+ Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G ++
Sbjct: 136 RGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 183 EQANAKSVIGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPY 229
+ GT + PE Y + A ++S G+ + +MV + P+
Sbjct: 194 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 18/226 (7%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+ + + IG G F V+ + +N +VA I + + E E ++ L H
Sbjct: 10 LTFVQEIGSGQFGLVHLGY-WLNKDKVA-----IKTIREGAMSEEDFIEEAEVMMKLSHP 63
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
+++ Y + + + ++TE G L Y R G + G+ YL
Sbjct: 64 KLVQLYG--VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 121
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP---EFMAPELYD 203
+ +IHRDL N + NQ +K+ D G+ + S GT ++ +PE++
Sbjct: 122 --EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 178
Query: 204 -ENYNELADIYSFGMCMLEMVT-FEYPYSECRNSAQIYKKVSSGIK 247
Y+ +D++SFG+ M E+ + + PY E R+++++ + +S+G +
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 223
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAW-CQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+R +V+G GAF TVYK +G V +++ SP+ + + E +++ +
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYL 145
+ R + TV ++T+L G L + R W QI G+ YL
Sbjct: 79 PYVSRLLGICL---TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYL 135
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME----QANAKSVIGTPEFMAPE- 200
D ++HRDL N+ + + VKI D GLA +++ + +A ++MA E
Sbjct: 136 --EDVRLVHRDLAARNVLVK-SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 201 LYDENYNELADIYSFGMCMLEMVTF 225
+ + +D++S+G+ + E++TF
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTF 217
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKAFDEVNGLE------VAWCQVRIDDVLQSP 68
L DP R + V+GK GAF V A E GL+ V V++ +
Sbjct: 17 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATE 74
Query: 69 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 119
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 120 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 189
Query: 172 KIGDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 225
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 226 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 281
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 304
Query: 282 D 282
D
Sbjct: 305 D 305
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKAFDEVNGLE------VAWCQVRIDDVLQSP 68
L DP R + V+GK GAF V A E GL+ V V++ +
Sbjct: 10 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATE 67
Query: 69 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 119
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 68 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 125
Query: 120 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 126 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 182
Query: 172 KIGDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 225
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 183 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 242
Query: 226 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 281
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 243 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 297
Query: 282 D 282
D
Sbjct: 298 D 298
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKAFDEVNGLE------VAWCQVRIDDVLQSP 68
L DP R + V+GK GAF V A E GL+ V V++ +
Sbjct: 2 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATE 59
Query: 69 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 119
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 60 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 117
Query: 120 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 118 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 174
Query: 172 KIGDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 225
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 234
Query: 226 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 281
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 235 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 289
Query: 282 D 282
D
Sbjct: 290 D 290
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E +G+G + VYKA D G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 27 EKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIR---EISLLKELHHPNIV 82
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ + + + ++ E + + Q+L G+ + H H
Sbjct: 83 SLID--VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR- 139
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELY--DEN 205
I+HRDLK N+ IN + G +K+ D GLA I ++ V+ T + AP++ +
Sbjct: 140 -ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 206 YNELADIYSFGMCMLEMVT 224
Y+ DI+S G EM+T
Sbjct: 197 YSTSVDIWSIGCIFAEMIT 215
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 109/249 (43%), Gaps = 25/249 (10%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVVAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL +L Q + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLY--QMLVGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVK 255
APE + Y E DI+S G+ M EM+ + + Q K + G K
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 256 DPEVKSFIE 264
P V++++E
Sbjct: 253 QPTVRTYVE 261
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 10 KMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE 69
K++P D + E ++ ++ +G+G+F V++ D+ G + A +VR++
Sbjct: 59 KLKPVDYEYREE---VHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----- 110
Query: 70 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX 129
+E L + L I+ Y + + VNI EL GSL Q
Sbjct: 111 RVEELVA----CAGLSSPRIVPLYGA--VREGPWVNIFMELLEGGSLGQLIKQMGCLPED 164
Query: 130 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAK 188
+ Q L GL YLH+ I+H D+K DN+ ++ + + D G A ++ K
Sbjct: 165 RALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 222
Query: 189 SVI------GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSE 231
S++ GT MAPE + + + DI+S ML M+ +P+++
Sbjct: 223 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII 90
E +G+G + VYKA D G VA ++R+D + P R E+ LLK L H NI+
Sbjct: 27 EKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIR---EISLLKELHHPNIV 82
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ + + + ++ E + + Q+L G+ + H H
Sbjct: 83 SLID--VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR- 139
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELY--DEN 205
I+HRDLK N+ IN + G +K+ D GLA I ++ V+ T + AP++ +
Sbjct: 140 -ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 206 YNELADIYSFGMCMLEMVT 224
Y+ DI+S G EM+T
Sbjct: 197 YSTSVDIWSIGCIFAEMIT 215
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 33 VIGKGAFKTVY----KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN 88
VIG+G++ V K D + ++V ++ DD ED++ + +E H+ + ++
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-----EDIDWVQTEKHVFEQASNHP 81
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
+ +S +++ +I E G L + ++ +I L YLH
Sbjct: 82 FLVGLHSCFQTESRLFFVI-EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 140
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPE-LYDEN 205
II+RDLK DN+ ++ ++G +K+ D G+ + GTP ++APE L E+
Sbjct: 141 G--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 206 YNELADIYSFGMCMLEMVTFEYPY 229
Y D ++ G+ M EM+ P+
Sbjct: 198 YGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 33 VIGKGAFKTVY----KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN 88
VIG+G++ V K D + ++V ++ DD ED++ + +E H+ + ++
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-----EDIDWVQTEKHVFEQASNHP 70
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
+ +S +++ +I E G L + ++ +I L YLH
Sbjct: 71 FLVGLHSCFQTESRLFFVI-EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 129
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPE-LYDEN 205
II+RDLK DN+ ++ ++G +K+ D G+ + GTP ++APE L E+
Sbjct: 130 G--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 186
Query: 206 YNELADIYSFGMCMLEMVTFEYPY 229
Y D ++ G+ M EM+ P+
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 136
E+ LL+ LKH N+I ++ ++ V ++ + + R
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 137 --------QILSGLIYLHSHDPPIIHRDLKCDNIFING---NQGEVKIGDLGLATIMEQ- 184
QIL G+ YLH++ ++HRDLK NI + G +G VKI D+G A +
Sbjct: 128 GMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 185 ----ANAKSVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMVTFEYPYSECRN 234
A+ V+ T + APEL +Y + DI++ G E++T E P CR
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQ 240
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 55/250 (22%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNI 89
K IG+G++ V A + A + + + Q +P+D+ER+ +EV L+K L H NI
Sbjct: 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI 90
Query: 90 IRFYNSWIDDQNKTVNIITELF-------------------------------------- 111
R Y + D+Q + ++ EL
Sbjct: 91 ARLYEVYEDEQ--YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 112 -TSGSLRQYRXXX-XXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQG 169
+GS+ +R RQI S L YLH+ I HRD+K +N + N+
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG--ICHRDIKPENFLFSTNKS 206
Query: 170 -EVKIGDLGLATIMEQAN------AKSVIGTPEFMAPELY---DENYNELADIYSFGMCM 219
E+K+ D GL+ + N + GTP F+APE+ +E+Y D +S G+ +
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 220 LEMVTFEYPY 229
++ P+
Sbjct: 267 HLLLMGAVPF 276
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 19 LETDPTCRYIRYKEVIGK----GAFKTVYKAFDEVNGLE------VAWCQVRIDDVLQSP 68
L DP R + V+GK GAF V A E GL+ V V++ +
Sbjct: 58 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATE 115
Query: 69 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 119
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 116 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 173
Query: 120 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 174 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 230
Query: 172 KIGDLGLATIMEQAN--AKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 225
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290
Query: 226 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 281
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 291 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 345
Query: 282 D 282
D
Sbjct: 346 D 346
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 33 VIGKGAFKTVY----KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN 88
VIG+G++ V K D + ++V ++ DD ED++ + +E H+ + ++
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-----EDIDWVQTEKHVFEQASNHP 66
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
+ +S +++ +I E G L + ++ +I L YLH
Sbjct: 67 FLVGLHSCFQTESRLFFVI-EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 125
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPE-LYDEN 205
II+RDLK DN+ ++ ++G +K+ D G+ + GTP ++APE L E+
Sbjct: 126 G--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 206 YNELADIYSFGMCMLEMVTFEYPY 229
Y D ++ G+ M EM+ P+
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 109/249 (43%), Gaps = 25/249 (10%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL +L Q + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLY--QMLVGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVK 255
APE + Y E DI+S G+ M EM+ + + Q K + G K
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 256 DPEVKSFIE 264
P V++++E
Sbjct: 253 QPTVRTYVE 261
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I K +G G F VY+ + L VA + + + ++E E ++K +KH
Sbjct: 13 ITMKHKLGGGQFGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEEFLKEAAVMKEIKHP 67
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXXXGWARQILSGLIYL 145
N+++ + + IITE T G+L Y A QI S + YL
Sbjct: 68 NLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQANAKSVIGTPEFMAP 199
+ IHRDL N + N VK+ D GL+ +M A AK I ++ AP
Sbjct: 126 EKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAP 179
Query: 200 E-LYDENYNELADIYSFGMCMLEMVTF 225
E L ++ +D+++FG+ + E+ T+
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATY 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Query: 7 GAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ 66
GA P+ D E + T +++K +G G + VY+ + L VA + + +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKE 53
Query: 67 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXX 124
++E E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
Query: 125 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-- 182
A QI S + YL + IHRDL N + N VK+ D GL+ +M
Sbjct: 112 EVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTG 168
Query: 183 ----EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 169 DTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 20/227 (8%)
Query: 9 AKMEPPDPDVLETDPTCRYI-RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVL 65
A+ + P + P+ I RY+ + +G+G + VYKA D V VA ++R++
Sbjct: 14 AQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE 73
Query: 66 QS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 124
+ P R EV LLK L+H NII + + N +++I E + L++Y
Sbjct: 74 EGVPGTAIR---EVSLLKELQHRNIIELKS--VIHHNHRLHLIFE-YAENDLKKYMDKNP 127
Query: 125 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE----VKIGDLGLAT 180
+ Q+++G+ + HS +HRDLK N+ ++ + +KIGD GLA
Sbjct: 128 DVSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
Query: 181 I--MEQANAKSVIGTPEFMAPE--LYDENYNELADIYSFGMCMLEMV 223
+ I T + PE L +Y+ DI+S EM+
Sbjct: 186 AFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 108/249 (43%), Gaps = 25/249 (10%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL +L Q + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLY--QMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVK 255
APE + Y E DI+S G M EM+ + + Q K + G K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 256 DPEVKSFIE 264
P V++++E
Sbjct: 253 QPTVRTYVE 261
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + + Q+L G+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL---YQMLCGI 177
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 178 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 230
Query: 198 APE-LYDENYNELADIYSFGMCMLEMV 223
APE + Y E DI+S G M EMV
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 23 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 77 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 133
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 134 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 190
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 191 --NYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 21 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 75 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 132 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 188
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 189 --NYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Query: 7 GAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ 66
GA P+ D E + T +++K +G G + VY+ + L VA + + +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKE 53
Query: 67 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXX 124
++E E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
Query: 125 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-- 182
A QI S + YL + IHRDL N + N VK+ D GL+ +M
Sbjct: 112 EVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTG 168
Query: 183 ----EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 169 DTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 108/249 (43%), Gaps = 25/249 (10%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL +L Q + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLY--QMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVK 255
APE + Y E DI+S G M EM+ + + Q K + G K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 256 DPEVKSFIE 264
P V++++E
Sbjct: 253 QPTVRTYVE 261
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Query: 7 GAAKMEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ 66
GA P+ D E + T +++K +G G + VY+ + L VA + + +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKE 53
Query: 67 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXX 124
++E E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
Query: 125 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-- 182
A QI S + YL + IHRDL N + N VK+ D GL+ +M
Sbjct: 112 EVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTG 168
Query: 183 ----EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 169 DTXTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 17/293 (5%)
Query: 21 TDPTCRYIRYK--EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEV 78
T P+ RY+ E++G G V+ A D +VA +R D + + P R E
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD-LARDPSFYLRFRREA 63
Query: 79 HLLKSLKHNNIIRFYNSWIDD--QNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 136
+L H I+ Y++ + I+ E +LR
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVI 191
L + SH IIHRD+K NI I+ VK+ D G+A I + N+ +VI
Sbjct: 124 DACQALNF--SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPA 249
GT ++++PE ++ + +D+YS G + E++T E P++ + Y+ V I P+
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
Query: 250 ALSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNGTTKNRPLPLPD 300
A + ++ + + K L P ++ +A E+ D NG P L D
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTD 293
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 34/220 (15%)
Query: 26 RYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKS-- 83
R + E +GKG + V++ +G VA V+I S D + + E + +
Sbjct: 8 RQVALVECVGKGRYGEVWRGL--WHGESVA---VKIF----SSRDEQSWFRETEIYNTVL 58
Query: 84 LKHNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 141
L+H+NI+ F S + +N + + IT GSL + A G
Sbjct: 59 LRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRL-AVSAACG 117
Query: 142 LIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN------AKS 189
L +LH P I HRD K N+ + N + I DLGLA + Q +
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNL-QCCIADLGLAVMHSQGSDYLDIGNNP 176
Query: 190 VIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 222
+GT +MAPE+ DE + DI++FG+ + E+
Sbjct: 177 RVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 26 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 85
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 86 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 144
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP------E 195
+ YL S +HRDL N ++ + VK+ D GLA M SV +
Sbjct: 145 MKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 262 PDPLYEVML-KCWHPKAEMRPSFSELV 287
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 23/220 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 24 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 78 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 134
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 135 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 191
Query: 203 DENYNEL---ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 238
NY +D++SFG+ + E+VT PY N I
Sbjct: 192 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 229
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 121/281 (43%), Gaps = 20/281 (7%)
Query: 19 LETDPTCR-YIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSE 77
LE P + R V+GKG F V G A C+ ++ + +E
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYA-CKKLEKKRIKKRKGEAMALNE 234
Query: 78 VHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR--QYRXXXXXXXXXXXXGWA 135
+L+ + ++ ++ + + ++ L G L+ Y +A
Sbjct: 235 KQILEKVNSRFVVSLAYAY--ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-IMEQANAKSVIGTP 194
+I GL LH I++RDLK +NI ++ + G ++I DLGLA + E K +GT
Sbjct: 293 AEICCGLEDLHRER--IVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 195 EFMAPELY-DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAAL 251
+MAPE+ +E Y D ++ G + EM+ + P+ + R ++V +K P
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ-RKKKIKREEVERLVKEVPEEY 408
Query: 252 SKVKDPEVKSFIEKCLVP-ASQRL-----SAKELLMDPFLQ 286
S+ P+ +S + L ++RL SA+E+ P +
Sbjct: 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 121/281 (43%), Gaps = 20/281 (7%)
Query: 19 LETDPTCR-YIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSE 77
LE P + R V+GKG F V G A C+ ++ + +E
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYA-CKKLEKKRIKKRKGEAMALNE 234
Query: 78 VHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR--QYRXXXXXXXXXXXXGWA 135
+L+ + ++ ++ + + ++ L G L+ Y +A
Sbjct: 235 KQILEKVNSRFVVSLAYAY--ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-IMEQANAKSVIGTP 194
+I GL LH I++RDLK +NI ++ + G ++I DLGLA + E K +GT
Sbjct: 293 AEICCGLEDLHRER--IVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 195 EFMAPELY-DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PAAL 251
+MAPE+ +E Y D ++ G + EM+ + P+ + R ++V +K P
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ-RKKKIKREEVERLVKEVPEEY 408
Query: 252 SKVKDPEVKSFIEKCLVP-ASQRL-----SAKELLMDPFLQ 286
S+ P+ +S + L ++RL SA+E+ P +
Sbjct: 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 108/249 (43%), Gaps = 25/249 (10%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL +L Q + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLY--QMLVGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVK 255
APE + Y E DI+S G M EM+ + + Q K + G K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 256 DPEVKSFIE 264
P V++++E
Sbjct: 253 QPTVRTYVE 261
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 15 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 69 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 126 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 182
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL +L Q + Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLY--QMLXGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSDXT-LKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 252 LQ-PTVRNYVE 261
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 30 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL + + + Q+L G+
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 144
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 145 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 197
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E D++S G M EMV + + R+ + KV + P + K
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 256
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 257 LQ-PTVRTYVE 266
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL + + + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE-----FM 197
+LHS IIHRDLK NI + + +KI D GLA + S + PE +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMEPEVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E D++S G M EMV + + R+ + KV + P + K
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 252 LQ-PTVRTYVE 261
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 23/220 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 17 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX--XXXXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 71 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 127
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 128 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 184
Query: 203 DENYNEL---ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 238
NY +D++SFG+ + E+VT PY N I
Sbjct: 185 --NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 11 MEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPED 70
M+P P+ + + I K +G G + VY+ + L VA + + + +
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTME 57
Query: 71 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXX 128
+E E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 115
Query: 129 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------ 182
A QI S + YL + IHRDL N + N VK+ D GL+ +M
Sbjct: 116 VVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYT 172
Query: 183 EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 173 AHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 24/229 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWC---QVRIDDVLQSPEDLERLYSEVHLLKSL 84
+ + + IG G F V+ + W +V I + + E E ++ L
Sbjct: 9 LTFVQEIGSGQFGLVHLGY---------WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL 59
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLI 143
H +++ Y + + + ++ E G L Y R G + G+
Sbjct: 60 SHPKLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP---EFMAPE 200
YL + +IHRDL N + NQ +K+ D G+ + S GT ++ +PE
Sbjct: 118 YLE--EASVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 201 LYD-ENYNELADIYSFGMCMLEMVT-FEYPYSECRNSAQIYKKVSSGIK 247
++ Y+ +D++SFG+ M E+ + + PY E R+++++ + +S+G +
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL +L Q + Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLY--QMLXGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSDXT-LKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 252 LQ-PTVRNYVE 261
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + + Q+L G+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL---YQMLCGI 177
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 178 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 230
Query: 198 APE-LYDENYNELADIYSFGMCMLEMV 223
APE + Y E DI+S G M EMV
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 45 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 104
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 105 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 163
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP------E 195
+ YL S +HRDL N ++ + VK+ D GLA M SV +
Sbjct: 164 MKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 280
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 281 PDPLYEVML-KCWHPKAEMRPSFSELV 306
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + + Q+L G+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 140
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 141 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 193
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 253 LQ-PTVRNYVE 262
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 25 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 79 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 135
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 136 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 192
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 193 --NYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + + Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 252 LQ-PTVRNYVE 261
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 16 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX--XXXXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 70 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 126
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 127 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 183
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 184 --NYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 15 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX--XXXXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 69 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 126 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 182
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL +L Q + Q+L G+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLY--QMLXGI 132
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 133 KHLHSAG--IIHRDLKPSNIVVKSDX-TLKILDFGLA----RTAGTSFMMTPYVVTRYYR 185
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 245 LQ-PTVRNYVE 254
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + + Q+L G+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 140
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 141 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 193
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 253 LQ-PTVRNYVE 262
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + + Q+L G+
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 138
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 139 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 191
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 250
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 251 LQ-PTVRNYVE 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 20 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX--XXXXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 74 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 130
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 131 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 187
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 188 --NYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 108/249 (43%), Gaps = 25/249 (10%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL +L Q + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLY--QMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVK 255
APE + Y E DI+S G M EM+ + + Q K + G K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 256 DPEVKSFIE 264
P V++++E
Sbjct: 253 QPTVRTYVE 261
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 11 MEP-PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE 69
M+P P+ D E + T +++K +G G + VY+ + L VA + + +
Sbjct: 3 MDPSPNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTM 55
Query: 70 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXX 127
++E E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 56 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 113
Query: 128 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----- 182
A QI S + YL + IHRDL N + N VK+ D GL+ +M
Sbjct: 114 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 170
Query: 183 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 171 TAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+ + + IG G F V+ + +N +VA I + + E E ++ L H
Sbjct: 12 LTFVQEIGSGQFGLVHLGY-WLNKDKVA-----IKTIREGAMSEEDFIEEAEVMMKLSHP 65
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
+++ Y + + + ++ E G L Y R G + G+ YL
Sbjct: 66 KLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 123
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP---EFMAPELYD 203
+ +IHRDL N + NQ +K+ D G+ + S GT ++ +PE++
Sbjct: 124 --EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 180
Query: 204 -ENYNELADIYSFGMCMLEMVT-FEYPYSECRNSAQIYKKVSSGIK 247
Y+ +D++SFG+ M E+ + + PY E R+++++ + +S+G +
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 225
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + + Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 252 LQ-PTVRNYVE 261
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 27 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL + + + Q+L G+
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 141
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANAKSVIGTPEFMAPE- 200
+LHS IIHRDLK NI + + +KI D GLA T + T + APE
Sbjct: 142 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEV 198
Query: 201 LYDENYNELADIYSFGMCMLEMV 223
+ Y E DI+S G M EM+
Sbjct: 199 ILGMGYKENVDIWSVGCIMGEMI 221
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 32/248 (12%)
Query: 20 ETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPED-LERLYSEV 78
E D + E+IGKG F VY +G EVA +R+ D+ + ED L+ EV
Sbjct: 27 EWDIPFEQLEIGELIGKGRFGQVYHG--RWHG-EVA---IRLIDIERDNEDQLKAFKREV 80
Query: 79 HLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQ 137
+ +H N++ F + + + + IIT L +L R A++
Sbjct: 81 MAYRQTRHENVVLFMGACMSPPH--LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQE 138
Query: 138 ILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI--MEQANAKS-----V 190
I+ G+ YLH+ I+H+DLK N+F + G+V I D GL +I + QA +
Sbjct: 139 IVKGMGYLHAKG--ILHKDLKSKNVFY--DNGKVVITDFGLFSISGVLQAGRREDKLRIQ 194
Query: 191 IGTPEFMAPELYDE----------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 240
G +APE+ + +++ +D+++ G E+ E+P+ A I+
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW- 253
Query: 241 KVSSGIKP 248
++ +G+KP
Sbjct: 254 QMGTGMKP 261
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 21 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX--XXXXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 75 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 132 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 188
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 189 --NYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL + + + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVK 255
APE + Y E DI+S G M EM+ + + Q K + G K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 256 DPEVKSFIE 264
P V++++E
Sbjct: 253 QPTVRTYVE 261
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVA--IKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + + Q+L G+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 133
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 134 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 186
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 246 LQ-PTVRNYVE 255
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 42/259 (16%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 93
+G G F V+ N +V I + E E ++K LKH+ +++ Y
Sbjct: 17 LGNGQFGEVWMGTWNGN------TKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLY 70
Query: 94 NSWIDDQNKTVNIITELFTSGSLRQYRX--XXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
+ + I+TE GSL + A Q+ +G+ Y+ +
Sbjct: 71 AV---VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-- 125
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE--LYDENY 206
IHRDL+ NI + GN KI D GLA ++E + A+ P ++ APE LY +
Sbjct: 126 YIHRDLRSANILV-GNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG-RF 183
Query: 207 NELADIYSFGMCMLEMVT-FEYPYSECRNSAQIYKKVSSGIK-------PAALSKV---- 254
+D++SFG+ + E+VT PY N+ ++ ++V G + P +L ++
Sbjct: 184 TIKSDVWSFGILLTELVTKGRVPYPGM-NNREVLEQVERGYRMPCPQDCPISLHELMIHC 242
Query: 255 --KDPE-------VKSFIE 264
KDPE ++SF+E
Sbjct: 243 WKKDPEERPTFEYLQSFLE 261
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVA--IKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + + Q+L G+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 133
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 134 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 186
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 246 LQ-PTVRNYVE 255
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I K +G G + VY+ + L VA + + + ++E E ++K +KH
Sbjct: 13 ITMKHKLGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEEFLKEAAVMKEIKHP 67
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXXXGWARQILSGLIYL 145
N+++ + + IITE T G+L Y A QI S + YL
Sbjct: 68 NLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQANAKSVIGTPEFMAP 199
+ IHRDL N + N VK+ D GL+ +M A AK I ++ AP
Sbjct: 126 EKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTFTAHAGAKFPI---KWTAP 179
Query: 200 E-LYDENYNELADIYSFGMCMLEMVTF 225
E L ++ +D+++FG+ + E+ T+
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATY 206
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 24/229 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWC---QVRIDDVLQSPEDLERLYSEVHLLKSL 84
+ + + IG G F V+ + W +V I + + E E ++ L
Sbjct: 9 LTFVQEIGSGQFGLVHLGY---------WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL 59
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLI 143
H +++ Y + + + ++ E G L Y R G + G+
Sbjct: 60 SHPKLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP---EFMAPE 200
YL + +IHRDL N + NQ +K+ D G+ + S GT ++ +PE
Sbjct: 118 YLE--EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 201 LYD-ENYNELADIYSFGMCMLEMVT-FEYPYSECRNSAQIYKKVSSGIK 247
++ Y+ +D++SFG+ M E+ + + PY E R+++++ + +S+G +
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 222
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 25 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 84
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 85 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 143
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP------E 195
+ YL S +HRDL N ++ + VK+ D GLA M SV +
Sbjct: 144 MKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 261 PDPLYEVML-KCWHPKAEMRPSFSELV 286
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL + + + Q+L G+
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 140
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 141 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 193
Query: 198 APE-LYDENYNELADIYSFGMCMLEMV 223
APE + Y E DI+S G M EM+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL +L Q + Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLY--QMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSDX-TLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 252 LQ-PTVRNYVE 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+ + + IG G F V+ + +N +VA I + + E E ++ L H
Sbjct: 7 LTFVQEIGSGQFGLVHLGY-WLNKDKVA-----IKTIREGAMSEEDFIEEAEVMMKLSHP 60
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
+++ Y + + + ++ E G L Y R G + G+ YL
Sbjct: 61 KLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP---EFMAPELYD 203
+ +IHRDL N + NQ +K+ D G+ + S GT ++ +PE++
Sbjct: 119 --EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 175
Query: 204 -ENYNELADIYSFGMCMLEMVT-FEYPYSECRNSAQIYKKVSSGIK 247
Y+ +D++SFG+ M E+ + + PY E R+++++ + +S+G +
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 220
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL + + + Q+L G+
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 133
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 134 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 186
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E D++S G M EMV + + R+ + KV + P + K
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 246 LQ-PTVRTYVE 255
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 3 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 55
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHRDL N + N VK+ D GL+ +M A
Sbjct: 114 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 170
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 171 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVA--IKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + + Q+L G+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 132
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 133 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 185
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 245 LQ-PTVRNYVE 254
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 3 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 55
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHRDL N + N VK+ D GL+ +M A
Sbjct: 114 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 170
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 171 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII- 90
+VIG G+F V++A V EVA I VLQ R E+ +++ +KH N++
Sbjct: 46 KVIGNGSFGVVFQA-KLVESDEVA-----IKKVLQDKRFKNR---ELQIMRIVKHPNVVD 96
Query: 91 --RFYNSWIDDQNKT-VNIITELFTSG---SLRQYRXXXXXXXXXXXXGWARQILSGLIY 144
F+ S D +++ +N++ E + R Y + Q+L L Y
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ G +K+ D G A I+ S I + + APEL
Sbjct: 157 IHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIF 214
Query: 203 -DENYNELADIYSFGMCMLEMV 223
NY DI+S G M E++
Sbjct: 215 GATNYTTNIDIWSTGCVMAELM 236
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D + LE ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + ++ + V I+ EL + + + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMV 223
APE + Y E DI+S G M EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 17/293 (5%)
Query: 21 TDPTCRYIRYK--EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEV 78
T P+ RY+ E++G G V+ A D +VA +R D + + P R E
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD-LARDPSFYLRFRREA 63
Query: 79 HLLKSLKHNNIIRFYNSWIDD--QNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 136
+L H I+ Y + + I+ E +LR
Sbjct: 64 QNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVI 191
L + SH IIHRD+K NI I+ VK+ D G+A I + N+ +VI
Sbjct: 124 DACQALNF--SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPA 249
GT ++++PE ++ + +D+YS G + E++T E P++ + Y+ V I P+
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
Query: 250 ALSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNGTTKNRPLPLPD 300
A + ++ + + K L P ++ +A E+ D NG P L D
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTD 293
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 46 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 105
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 106 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 164
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP------E 195
+ YL S +HRDL N ++ + VK+ D GLA M SV +
Sbjct: 165 MKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 281
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 282 PDPLYEVML-KCWHPKAEMRPSFSELV 307
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 104 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 163
++ I +L G L + +A +I+ GL H H+ +++RDLK NI
Sbjct: 266 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 323
Query: 164 INGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN--YNELADIYSFGMCMLE 221
++ G V+I DLGLA + + +GT +MAPE+ + Y+ AD +S G + +
Sbjct: 324 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 382
Query: 222 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL 267
++ P+ + + + + L PE++S +E L
Sbjct: 383 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLL 428
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 15 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX--XXXXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 69 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 126 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 182
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 86
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP------E 195
+ YL S +HRDL N ++ + VK+ D GLA M SV +
Sbjct: 146 MKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 263 PDPLYEVML-KCWHPKAEMRPSFSELV 288
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 4 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 56
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI 191
A QI S + YL + IHRDL N + N VK+ D GL+ +M +
Sbjct: 115 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAPA 171
Query: 192 GTP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
G ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 209
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 24 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 83
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 84 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 142
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP------E 195
+ YL S +HRDL N ++ + VK+ D GLA M SV +
Sbjct: 143 MKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 259
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 260 PDPLYEVML-KCWHPKAEMRPSFSELV 285
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ ++ +G G F V+ A + +V + + +E +E +++K+L+H+
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKH------TKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ + + + IITE GSL + ++ QI G+ ++
Sbjct: 244 KLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 300
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 301 EQRN--YIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 357
Query: 203 D-ENYNELADIYSFGMCMLEMVTF-EYPYSECRN 234
+ ++ +D++SFG+ ++E+VT+ PY N
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 391
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 104 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 163
++ I +L G L + +A +I+ GL H H+ +++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 324
Query: 164 INGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN--YNELADIYSFGMCMLE 221
++ G V+I DLGLA + + +GT +MAPE+ + Y+ AD +S G + +
Sbjct: 325 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 222 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL 267
++ P+ + + + + L PE++S +E L
Sbjct: 384 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLL 429
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 10 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX--XXXXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 64 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 120
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 121 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 177
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 178 --NYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 19 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 78
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 79 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 137
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP------E 195
+ YL S +HRDL N ++ + VK+ D GLA M SV +
Sbjct: 138 MKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 254
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 255 PDPLYEVML-KCWHPKAEMRPSFSELV 280
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 86 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 145
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 146 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 204
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-----EQANAKSVIGTP-E 195
+ +L S +HRDL N ++ + VK+ D GLA M + + K+ P +
Sbjct: 205 MKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 321
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 322 PDPLYEVML-KCWHPKAEMRPSFSELV 347
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 29 RYKEV--IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
RY+ + IG GA V A+D V VA ++ Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVA--IKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 87 NNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 142
NII N + + + V ++ EL + + + Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL---LYQMLCGI 139
Query: 143 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-----EFM 197
+LHS IIHRDLK NI + + +KI D GLA + S + TP +
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSDX-TLKILDFGLA----RTAGTSFMMTPYVVTRYYR 192
Query: 198 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK---PAALSK 253
APE + Y E DI+S G M EMV + + R+ + KV + P + K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 254 VKDPEVKSFIE 264
++ P V++++E
Sbjct: 252 LQ-PTVRNYVE 261
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAF-----DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
I IG+G F V++ + + + C+ D ++ E+ E ++
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-----EKFLQEALTMR 66
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H +I++ ++ V II EL T G LR + + +A Q+ +
Sbjct: 67 QFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGT--PEFMA 198
L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+ G ++MA
Sbjct: 124 LAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTXXKASKGKLPIKWMA 180
Query: 199 PELYD-ENYNELADIYSFGMCMLEMV 223
PE + + +D++ FG+CM E++
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 5 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 57
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHRDL N + N VK+ D GL+ +M A
Sbjct: 116 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 172
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 173 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 22 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 81
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 82 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 140
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP------E 195
+ YL S +HRDL N ++ + VK+ D GLA M SV +
Sbjct: 141 MKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 257
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 258 PDPLYEVML-KCWHPKAEMRPSFSELV 283
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 5 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 57
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI 191
A QI S + YL + IHRDL N + N VK+ D GL+ +M +
Sbjct: 116 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAPA 172
Query: 192 GTP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
G ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 5 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 57
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHRDL N + N VK+ D GL+ +M A
Sbjct: 116 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 172
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 173 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 104 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 163
++ I +L G L + +A +I+ GL H H+ +++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 324
Query: 164 INGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN--YNELADIYSFGMCMLE 221
++ G V+I DLGLA + + +GT +MAPE+ + Y+ AD +S G + +
Sbjct: 325 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 222 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL 267
++ P+ + + + + L PE++S +E L
Sbjct: 384 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLL 429
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 104 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 163
++ I +L G L + +A +I+ GL H H+ +++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 324
Query: 164 INGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN--YNELADIYSFGMCMLE 221
++ G V+I DLGLA + + +GT +MAPE+ + Y+ AD +S G + +
Sbjct: 325 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 222 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL 267
++ P+ + + + + L PE++S +E L
Sbjct: 384 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLL 429
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 15 LKLVERLGAGQAGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 69 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP---EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E A + G ++ APE
Sbjct: 126 EERN--YIHRDLRAANILVS-DTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAI 182
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEIVT 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA ++ D + ++E
Sbjct: 210 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEE 262
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 320
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHR+L N + N VK+ D GL+ +M A
Sbjct: 321 LYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 377
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 378 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 415
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 23/160 (14%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ------------ 184
QI + +LHS ++HRDLK NIF + VK+GD GL T M+Q
Sbjct: 172 QIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 185 --ANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 241
A +GT +M+PE ++ NY+ DI+S G+ + E++ Y +S +I
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YSFSTQMERVRIITD 285
Query: 242 VSSGIKPAALSKVKDPEVKSFIEKCLVPA-SQRLSAKELL 280
V + P ++ K P+ ++ L P+ ++R A +++
Sbjct: 286 VRNLKFPLLFTQ-KYPQEHMMVQDMLSPSPTERPEATDII 324
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G+G F V++A ++V+ A ++R+ + + E + R EV L L+H I+R
Sbjct: 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMR---EVKALAKLEHPGIVR 68
Query: 92 FYNSWID 98
++N+W++
Sbjct: 69 YFNAWLE 75
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 26 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 85
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 86 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 144
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP------E 195
+ YL S +HRDL N ++ + VK+ D GLA M SV +
Sbjct: 145 MKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 262 PDPLYEVML-KCWHPKAEMRPSFSELV 287
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 86
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP------E 195
+ YL S +HRDL N ++ + VK+ D GLA M SV +
Sbjct: 146 MKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 263 PDPLYEVML-KCWHPKAEMRPSFSELV 288
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAF---DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL 84
I IG+G F V++ E L VA ++ S E+ E ++
Sbjct: 15 IELGRCIGEGQFGDVHQGIYMSPENPALAVA---IKTCKNCTSDSVREKFLQEALTMRQF 71
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLI 143
H +I++ ++ V II EL T G LR + + +A Q+ + L
Sbjct: 72 DHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 128
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGT--PEFMAPE 200
YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+ G ++MAPE
Sbjct: 129 YLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 185
Query: 201 LYD-ENYNELADIYSFGMCMLEMV 223
+ + +D++ FG+CM E++
Sbjct: 186 SINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ ++ +G G F V+ A + +V + + +E +E +++K+L+H+
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKH------TKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX--XXXXXXXXXXGWARQILSGLIYL 145
+++ + + + IITE GSL + ++ QI G+ ++
Sbjct: 71 KLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 127
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHRDL+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 128 EQRN--YIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 184
Query: 203 D-ENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQI 238
+ ++ +D++SFG+ ++E+VT+ PY N I
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 115
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 176 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 233
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 234 GATDYTSSIDVWSAGCVLAELL 255
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 113
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 174 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 231
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 232 GATDYTSSIDVWSAGCVLAELL 253
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 3 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 55
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHRDL N + N VK+ D GL+ +M A
Sbjct: 114 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 170
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 171 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL-KHNNII 90
E IG G F +V+K ++G + R L D + EV+ L +H++++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDG--CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSL-----RQYRXXXXXXXXXXXXGWARQILSGLIYL 145
R++++W +D + + E GSL YR Q+ GL Y+
Sbjct: 73 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKD-LLLQVGRGLRYI 129
Query: 146 HSHDPPIIHRDLKCDNIFIN------------------GNQGEVKIGDLGLATIMEQANA 187
HS ++H D+K NIFI+ N+ KIGDLG T +
Sbjct: 130 HSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 188 KSVIGTPEFMAPELYDENYNEL--ADIYSFGMCML 220
+ G F+A E+ ENY L ADI++ + ++
Sbjct: 188 EE--GDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL-KHNNII 90
E IG G F +V+K ++G + R L D + EV+ L +H++++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDG--CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSL-----RQYRXXXXXXXXXXXXGWARQILSGLIYL 145
R++++W +D + + E GSL YR Q+ GL Y+
Sbjct: 73 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKD-LLLQVGRGLRYI 129
Query: 146 HSHDPPIIHRDLKCDNIFIN------------------GNQGEVKIGDLGLATIMEQANA 187
HS ++H D+K NIFI+ N+ KIGDLG T +
Sbjct: 130 HSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 188 KSVIGTPEFMAPELYDENYNEL--ADIYSFGMCML 220
+ G F+A E+ ENY L ADI++ + ++
Sbjct: 188 EE--GDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAF---DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL 84
I IG+G F V++ E L VA ++ S E+ E ++
Sbjct: 14 IELGRCIGEGQFGDVHQGIYMSPENPALAVA---IKTCKNCTSDSVREKFLQEALTMRQF 70
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLI 143
H +I++ ++ V II EL T G LR + + +A Q+ + L
Sbjct: 71 DHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 127
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGT--PEFMAPE 200
YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+ G ++MAPE
Sbjct: 128 YLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 184
Query: 201 LYD-ENYNELADIYSFGMCMLEMV 223
+ + +D++ FG+CM E++
Sbjct: 185 SINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 111
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 172 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 229
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 230 GATDYTSSIDVWSAGCVLAELL 251
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 16 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 68
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 69 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 126
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHRDL N + N VK+ D GL+ +M A
Sbjct: 127 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 183
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 184 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 221
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA ++ D + ++E
Sbjct: 249 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEE 301
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 359
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHR+L N + N VK+ D GL+ +M A
Sbjct: 360 LYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 416
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 417 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 454
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 111
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 172 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 229
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 230 GATDYTSSIDVWSAGCVLAELL 251
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAF-----DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
I IG+G F V++ + + + C+ D ++ E+ E ++
Sbjct: 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-----EKFLQEALTMR 446
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H +I++ ++ V II EL T G LR + + +A Q+ +
Sbjct: 447 QFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGT--PEFMA 198
L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+ G ++MA
Sbjct: 504 LAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 560
Query: 199 PELYD-ENYNELADIYSFGMCMLEMV 223
PE + + +D++ FG+CM E++
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL-KHNNII 90
E IG G F +V+K ++G + R L D + EV+ L +H++++
Sbjct: 13 EKIGSGEFGSVFKCVKRLDG--CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 70
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSL-----RQYRXXXXXXXXXXXXGWARQILSGLIYL 145
R++++W +D + + E GSL YR Q+ GL Y+
Sbjct: 71 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKD-LLLQVGRGLRYI 127
Query: 146 HSHDPPIIHRDLKCDNIFIN------------------GNQGEVKIGDLGLATIMEQANA 187
HS ++H D+K NIFI+ N+ KIGDLG T +
Sbjct: 128 HSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 185
Query: 188 KSVIGTPEFMAPELYDENYNEL--ADIYSFGMCML 220
+ G F+A E+ ENY L ADI++ + ++
Sbjct: 186 EE--GDSRFLANEVLQENYTHLPKADIFALALTVV 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPED--LERL-YSEVHLLKSLKHNNI 89
++G+G++ V K ++ G VA I L+S +D ++++ E+ LLK L+H N+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVA-----IKKFLESDDDKMVKKIAMREIKLLKQLRHENL 86
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
+ + + K ++ E L + QI++G+ + HSH+
Sbjct: 87 VNLLE--VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA--KSVIGTPEFMAPELY--DEN 205
IIHRD+K +NI ++ G VK+ D G A + + T + APEL D
Sbjct: 145 --IIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 206 YNELADIYSFGMCMLEMVTFE 226
Y + D+++ G + EM E
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGE 222
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL-KHNNII 90
E IG G F +V+K ++G + R L D + EV+ L +H++++
Sbjct: 17 EKIGSGEFGSVFKCVKRLDG--CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 74
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSL-----RQYRXXXXXXXXXXXXGWARQILSGLIYL 145
R++++W +D + + E GSL YR Q+ GL Y+
Sbjct: 75 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKD-LLLQVGRGLRYI 131
Query: 146 HSHDPPIIHRDLKCDNIFIN------------------GNQGEVKIGDLGLATIMEQANA 187
HS ++H D+K NIFI+ N+ KIGDLG T +
Sbjct: 132 HSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 189
Query: 188 KSVIGTPEFMAPELYDENYNEL--ADIYSFGMCML 220
+ G F+A E+ ENY L ADI++ + ++
Sbjct: 190 EE--GDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 32 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 91
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 92 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 150
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-----EQANAKSVIGTP-E 195
+ +L S +HRDL N ++ + VK+ D GLA M + + K+ P +
Sbjct: 151 MKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 267
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 268 PDPLYEVML-KCWHPKAEMRPSFSELV 293
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAF---DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL 84
I IG+G F V++ E L VA ++ S E+ E ++
Sbjct: 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVA---IKTCKNCTSDSVREKFLQEALTMRQF 73
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLI 143
H +I++ ++ V II EL T G LR + + +A Q+ + L
Sbjct: 74 DHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 130
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGT--PEFMAPE 200
YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+ G ++MAPE
Sbjct: 131 YLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 187
Query: 201 LYD-ENYNELADIYSFGMCMLEMV 223
+ + +D++ FG+CM E++
Sbjct: 188 SINFRRFTSASDVWMFGVCMWEIL 211
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + + R Y + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAF---DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL 84
I IG+G F V++ E L VA ++ S E+ E ++
Sbjct: 9 IELGRCIGEGQFGDVHQGIYMSPENPALAVA---IKTCKNCTSDSVREKFLQEALTMRQF 65
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLI 143
H +I++ ++ V II EL T G LR + + +A Q+ + L
Sbjct: 66 DHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGT--PEFMAPE 200
YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+ G ++MAPE
Sbjct: 123 YLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
Query: 201 LYD-ENYNELADIYSFGMCMLEMV 223
+ + +D++ FG+CM E++
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 105
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 166 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 223
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 224 GATDYTSSIDVWSAGCVLAELL 245
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 3 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 55
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHRDL N + N VK+ D GL+ +M A
Sbjct: 114 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 170
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 171 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAF---DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL 84
I IG+G F V++ E L VA ++ S E+ E ++
Sbjct: 40 IELGRCIGEGQFGDVHQGIYMSPENPALAVA---IKTCKNCTSDSVREKFLQEALTMRQF 96
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLI 143
H +I++ ++ V II EL T G LR + + +A Q+ + L
Sbjct: 97 DHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 153
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGT--PEFMAPE 200
YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+ G ++MAPE
Sbjct: 154 YLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 210
Query: 201 LYD-ENYNELADIYSFGMCMLEMV 223
+ + +D++ FG+CM E++
Sbjct: 211 SINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 86
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-----EQANAKSVIGTP-E 195
+ +L S +HRDL N ++ + VK+ D GLA M + + K+ P +
Sbjct: 146 MKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 263 PDPLYEVML-KCWHPKAEMRPSFSELV 288
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 28 IRYKEVIGKGAFKTVYKAF---DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL 84
I IG+G F V++ E L VA ++ S E+ E ++
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPALAVA---IKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLI 143
H +I++ ++ V II EL T G LR + + +A Q+ + L
Sbjct: 69 DHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGT--PEFMAPE 200
YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+ G ++MAPE
Sbjct: 126 YLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 201 LYD-ENYNELADIYSFGMCMLEMV 223
+ + +D++ FG+CM E++
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 28 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 87
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 88 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 146
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-----EQANAKSVIGTP-E 195
+ +L S +HRDL N ++ + VK+ D GLA M + + K+ P +
Sbjct: 147 MKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 264 PDPLYEVML-KCWHPKAEMRPSFSELV 289
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 156
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 217 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 274
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 275 GATDYTSSIDVWSAGCVLAELL 296
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 28 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 87
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 88 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 146
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-----EQANAKSVIGTP-E 195
+ +L S +HRDL N ++ + VK+ D GLA M + + K+ P +
Sbjct: 147 MKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 264 PDPLYEVML-KCWHPKAEMRPSFSELV 289
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 269 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y ++ + I+TE + GSL + A QI SG+ Y+
Sbjct: 323 KLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 380 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 436
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 437 LYG-RFTIKSDVWSFGILLTELTT 459
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
+++V+G GAF V A D+ VA + + L+ E + +E+ +L +KH NI
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVA-IKCIAKEALEGKEG--SMENEIAVLHKIKHPNI 78
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
+ + I + + +I +L + G L Q+L + YLH D
Sbjct: 79 VALDD--IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--D 134
Query: 150 PPIIHRDLKCDNIFING--NQGEVKIGDLGLATIMEQANAKS-VIGTPEFMAPE-LYDEN 205
I+HRDLK +N+ ++ I D GL+ + + + S GTP ++APE L +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
Y++ D +S G+ ++ P+ + N A++++++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQI 230
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAF-----DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
I IG+G F V++ + + + C+ D ++ E+ E ++
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-----EKFLQEALTMR 66
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H +I++ ++ V II EL T G LR + + +A Q+ +
Sbjct: 67 QFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGT--PEFMA 198
L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+ G ++MA
Sbjct: 124 LAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 199 PELYD-ENYNELADIYSFGMCMLEMV 223
PE + + +D++ FG+CM E++
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 96
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 157 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 214
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 215 GATDYTSSIDVWSAGCVLAELL 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 85
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 146 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 203
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 204 GATDYTSSIDVWSAGCVLAELL 225
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
EV +G F V+KA L + V+I + Q + + Y EV+ L +KH NI++
Sbjct: 30 EVKARGRFGCVWKA-----QLLNEYVAVKIFPI-QDKQSWQNEY-EVYSLPGMKHENILQ 82
Query: 92 FYNSWIDDQNKTVNI----ITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLH- 146
F + + + +V++ IT GSL + A + GL YLH
Sbjct: 83 FIGA--EKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHI-AETMARGLAYLHE 139
Query: 147 -------SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME----QANAKSVIGTPE 195
H P I HRD+K N+ + N I D GLA E + +GT
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAGDTHGQVGTRR 198
Query: 196 FMAPELYDE--NYNELA----DIYSFGMCMLEMVT 224
+MAPE+ + N+ A D+Y+ G+ + E+ +
Sbjct: 199 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA ++ D + ++E
Sbjct: 207 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEE 259
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + IITE T G+L Y
Sbjct: 260 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 317
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHR+L N + N VK+ D GL+ +M A
Sbjct: 318 LYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 374
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 375 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 412
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 17/282 (6%)
Query: 21 TDPTCRYIRYK--EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEV 78
T P+ RY+ E++G G V+ A D +VA +R D + + P R E
Sbjct: 22 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD-LARDPSFYLRFRREA 80
Query: 79 HLLKSLKHNNIIRFYNSWIDD--QNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 136
+L H I+ Y++ + I+ E +LR
Sbjct: 81 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 140
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVI 191
L + SH IIHRD+K NI I+ VK+ D G+A I + N+ +VI
Sbjct: 141 DACQALNF--SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 192 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPA 249
GT ++++PE ++ + +D+YS G + E++T E P++ + Y+ V I P+
Sbjct: 198 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 257
Query: 250 ALSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNG 289
A + ++ + + K L P ++ +A E+ D NG
Sbjct: 258 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 299
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 89
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 150 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 208 GATDYTSSIDVWSAGCVLAELL 229
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 134
SE ++ H NIIR + + + I+TE +GSL + R G
Sbjct: 99 SEASIMGQFDHPNIIRLEG--VVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA--NAKSVIG 192
R + +G+ YL D +HRDL N+ ++ N K+ D GL+ ++E A + G
Sbjct: 157 LRGVGAGMRYLS--DLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 193 TP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 234
+ APE + ++ +D++SFG+ M E++ + E PY N
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 90
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 151 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 208
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 209 GATDYTSSIDVWSAGCVLAELL 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 37/281 (13%)
Query: 26 RYIRYKEVIGKGAFKTVYKA----FDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLL 81
R I K +G+GAF V+ A + + D L + +D +R E LL
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR---EAELL 71
Query: 82 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY----------------RXXXXX 125
+L+H +I++FY + + ++ E G L ++ R
Sbjct: 72 TNLQHEHIVKFYG--VCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 126 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 185
A QI SG++YL S +HRDL N + N VKIGD G++ +
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANL-LVKIGDFGMSRDVYST 186
Query: 186 NAKSVIGTP----EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIY 239
+ V G +M PE + + +D++SFG+ + E+ T+ + P+ + N+ ++
Sbjct: 187 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT-EVI 245
Query: 240 KKVSSGIKPAALSKVKDPEVKSFIEKCLV-PASQRLSAKEL 279
+ ++ G + +V EV + C QRL+ KE+
Sbjct: 246 ECITQG-RVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 89
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 150 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 208 GATDYTSSIDVWSAGCVLAELL 229
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
+++V+G GAF V A D+ VA + + L+ E + +E+ +L +KH NI
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVA-IKCIAKEALEGKEG--SMENEIAVLHKIKHPNI 78
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
+ + I + + +I +L + G L Q+L + YLH D
Sbjct: 79 VALDD--IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--D 134
Query: 150 PPIIHRDLKCDNIFING--NQGEVKIGDLGLATIMEQANAKS-VIGTPEFMAPELYDEN- 205
I+HRDLK +N+ ++ I D GL+ + + + S GTP ++APE+ +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
Y++ D +S G+ ++ P+ + N A++++++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQI 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 86
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-----EQANAKSVIGTP-E 195
+ +L S +HRDL N ++ + VK+ D GLA M + + K+ P +
Sbjct: 146 MKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 263 PDPLYEVML-KCWHPKAEMRPSFSELV 288
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 82
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 143 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 200
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 201 GATDYTSSIDVWSAGCVLAELL 222
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF- 92
+G+G F VYK + VN VA ++ + + E ++ E+ ++ +H N++
Sbjct: 39 MGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 93 -YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW------ARQILSGLIYL 145
++S DD + ++ +GSL W A+ +G+ +L
Sbjct: 97 GFSSDGDD----LCLVYVYMPNGSLLD---RLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ----ANAKSVIGTPEFMAPEL 201
H + IHRD+K NI ++ KI D GLA E+ ++GT +MAPE
Sbjct: 150 HENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEA 206
Query: 202 YDENYNELADIYSFGMCMLEMVT 224
+DIYSFG+ +LE++T
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIIT 229
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 14/267 (5%)
Query: 23 PTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
P+ + + EVIG+G F VY N + C V+ + + ++ + +E ++K
Sbjct: 25 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 84
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H N++ + + + ++ G LR + R G+ Q+ G
Sbjct: 85 DFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 143
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-----EQANAKSVIGTP-E 195
+ +L S +HRDL N ++ + VK+ D GLA M + + K+ P +
Sbjct: 144 MKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 196 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 254
+MA E L + + +D++SFG+ + E++T P N+ I + G +
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 255 KDPEVKSFIEKCLVP-ASQRLSAKELL 280
DP + + KC P A R S EL+
Sbjct: 261 PDPLYEVML-KCWHPKAEMRPSFSELV 286
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
+++V+G GAF V A D+ VA + + L+ E + +E+ +L +KH NI
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVA-IKCIAKEALEGKEG--SMENEIAVLHKIKHPNI 78
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
+ + I + + +I +L + G L Q+L + YLH D
Sbjct: 79 VALDD--IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--D 134
Query: 150 PPIIHRDLKCDNIFING--NQGEVKIGDLGLATIMEQANAKS-VIGTPEFMAPELYDEN- 205
I+HRDLK +N+ ++ I D GL+ + + + S GTP ++APE+ +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
Y++ D +S G+ ++ P+ + N A++++++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQI 230
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
+++V+G GAF V A D+ VA + L+ E + +E+ +L +KH NI
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVA-IKCIAKKALEGKEG--SMENEIAVLHKIKHPNI 78
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
+ + I + + +I +L + G L Q+L + YLH D
Sbjct: 79 VALDD--IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--D 134
Query: 150 PPIIHRDLKCDNIFING--NQGEVKIGDLGLATIMEQANAKS-VIGTPEFMAPE-LYDEN 205
I+HRDLK +N+ ++ I D GL+ + + + S GTP ++APE L +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 206 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
Y++ D +S G+ ++ P+ + N A++++++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQI 230
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
Query: 11 MEPPDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPED 70
M+P P+ + + I K +G G + VY+ + L VA + + + +
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTME 57
Query: 71 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXX 128
+E E ++K +KH N+++ + + II E T G+L Y
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA 115
Query: 129 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------ 182
A QI S + YL + IHRDL N + N VK+ D GL+ +M
Sbjct: 116 VVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYT 172
Query: 183 EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 173 AHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 134
SE ++ H NIIR + + + I+TE +GSL + R G
Sbjct: 99 SEASIMGQFDHPNIIRLEG--VVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
R + +G+ YL D +HRDL N+ ++ N K+ D GL+ ++E + T
Sbjct: 157 LRGVGAGMRYLS--DLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAYTTTG 213
Query: 195 -----EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 234
+ APE + ++ +D++SFG+ M E++ + E PY N
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF- 92
+G+G F VYK + VN VA ++ + + E ++ E+ ++ +H N++
Sbjct: 39 MGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 93 -YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW------ARQILSGLIYL 145
++S DD + ++ +GSL W A+ +G+ +L
Sbjct: 97 GFSSDGDD----LCLVYVYMPNGSLLD---RLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ----ANAKSVIGTPEFMAPEL 201
H + IHRD+K NI ++ KI D GLA E+ ++GT +MAPE
Sbjct: 150 HENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEA 206
Query: 202 YDENYNELADIYSFGMCMLEMVT 224
+DIYSFG+ +LE++T
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIIT 229
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 100/229 (43%), Gaps = 24/229 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWC---QVRIDDVLQSPEDLERLYSEVHLLKSL 84
+ + + IG G F V+ + W +V I + + + E ++ L
Sbjct: 29 LTFVQEIGSGQFGLVHLGY---------WLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKL 79
Query: 85 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLI 143
H +++ Y + + + ++ E G L Y R G + G+
Sbjct: 80 SHPKLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 137
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP---EFMAPE 200
YL + +IHRDL N + NQ +K+ D G+ + S GT ++ +PE
Sbjct: 138 YLE--EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 194
Query: 201 LYD-ENYNELADIYSFGMCMLEMVT-FEYPYSECRNSAQIYKKVSSGIK 247
++ Y+ +D++SFG+ M E+ + + PY E R+++++ + +S+G +
Sbjct: 195 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 242
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 77
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 10 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE + GSL + A QI SG+ Y+
Sbjct: 64 KLVQLYAV---VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 120
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 121 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 177
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 178 LYG-RFTIKSDVWSFGILLTELTT 200
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF- 92
+G+G F VYK + VN VA ++ + + E ++ E+ ++ +H N++
Sbjct: 33 MGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 93 -YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW------ARQILSGLIYL 145
++S DD + ++ +GSL W A+ +G+ +L
Sbjct: 91 GFSSDGDD----LCLVYVYMPNGSLLD---RLSCLDGTPPLSWHMRCKIAQGAANGINFL 143
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ----ANAKSVIGTPEFMAPEL 201
H + IHRD+K NI ++ KI D GLA E+ ++GT +MAPE
Sbjct: 144 HENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEA 200
Query: 202 YDENYNELADIYSFGMCMLEMVT 224
+DIYSFG+ +LE++T
Sbjct: 201 LRGEITPKSDIYSFGVVLLEIIT 223
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 81
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 142 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 199
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 200 GATDYTSSIDVWSAGCVLAELL 221
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 78
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 139 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 196
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 197 GATDYTSSIDVWSAGCVLAELL 218
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 77
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 77
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 72 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 130
+ + E + L H +++FY + + + I+TE ++G L Y R
Sbjct: 48 DEFFQEAQTMMKLSHPKLVKFYG--VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ 105
Query: 131 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV 190
+ G+ +L SH IHRDL N ++ + VK+ D G+ + S
Sbjct: 106 LLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLC-VKVSDFGMTRYVLDDQYVSS 162
Query: 191 IGTP---EFMAPELYDE-NYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
+GT ++ APE++ Y+ +D+++FG+ M E+ + + PY NS ++ KVS G
Sbjct: 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-EVVLKVSQG 221
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 99/239 (41%), Gaps = 40/239 (16%)
Query: 22 DPTCRYIRYKEVIGK----GAFKTVYKA--FDEVNGLEVAWCQVRIDDVLQSPEDLERLY 75
DP + R V+GK G F V KA F V++ SP +L L
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX----------- 124
SE ++LK + H ++I+ Y + Q+ + +I E GSLR +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 125 -------------XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
+A QI G+ YL ++HRDL NI + + ++
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNILVAEGR-KM 189
Query: 172 KIGDLGLA--TIMEQANAKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
KI D GL+ E + K G ++MA E L+D Y +D++SFG+ + E+VT
Sbjct: 190 KISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ E +G G F V+ + NG +V + + Q + +E +L+K L+H
Sbjct: 11 LKLVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX--XXXXXXXXXXGWARQILSGLIYL 145
++R Y + + IITE +GSL + A QI G+ ++
Sbjct: 65 RLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 121
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELY 202
+ IHR+L+ NI ++ + KI D GLA ++E + A+ P ++ APE
Sbjct: 122 EERN--YIHRNLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 178
Query: 203 DENYNEL---ADIYSFGMCMLEMVT 224
NY +D++SFG+ + E+VT
Sbjct: 179 --NYGTFTIKSDVWSFGILLTEIVT 201
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 126/276 (45%), Gaps = 38/276 (13%)
Query: 31 KEVIGKGAFKT-VYKA-FDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK-SLKHN 87
K+V+G GA T VY+ FD + V + +L PE EV LL+ S +H
Sbjct: 29 KDVLGHGAEGTIVYRGMFDNRD--------VAVKRIL--PECFSFADREVQLLRESDEHP 78
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLH 146
N+IR++ + D Q + + I EL + +L++Y +Q SGL +LH
Sbjct: 79 NVIRYFCTEKDRQFQYIAI--EL-CAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH 135
Query: 147 SHDPPIIHRDLKCDNIFIN--GNQGEVK--IGDLGLATIMEQ-----ANAKSVIGTPEFM 197
S + I+HRDLK NI I+ G++K I D GL + + V GT ++
Sbjct: 136 SLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 198 APELYDENYNE----LADIYSFGMCMLEMVTFE--YPYSE-CRNSAQIYKKVSSGIKPAA 250
APE+ E+ E DI+S G C+ V E +P+ + + A I S +
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAG-CVFYYVISEGSHPFGKSLQRQANILLGACS-LDCLH 251
Query: 251 LSKVKDPEVKSFIEKCLVPASQ-RLSAKELLMDPFL 285
K +D + IEK + Q R SAK +L PF
Sbjct: 252 PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 32 EVIGKGAFKTVY---KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN 88
+V+G GA+ V+ K G A ++ ++Q + E +E +L+ ++ +
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 89 IIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSH 148
+ + + K +++I + G L + + +I+ L +LH
Sbjct: 120 FLVTLHYAFQTETK-LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK- 177
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM---EQANAKSVIGTPEFMAPELY--- 202
II+RD+K +NI ++ N G V + D GL+ E A GT E+MAP++
Sbjct: 178 -LGIIYRDIKLENILLDSN-GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG 235
Query: 203 DENYNELADIYSFGMCMLEMVTFEYPYS---ECRNSAQIYKKV 242
D +++ D +S G+ M E++T P++ E + A+I +++
Sbjct: 236 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI 278
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 4 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 56
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + II E T G+L Y
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHRDL N + N VK+ D GL+ +M A
Sbjct: 115 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHA 171
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 172 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 3 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 55
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + II E T G+L Y
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHRDL N + N VK+ D GL+ +M A
Sbjct: 114 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 170
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 171 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I K +G G + VY+ + L VA + + + ++E E ++K +KH
Sbjct: 13 ITMKHKLGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEEFLKEAAVMKEIKHP 67
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXXXGWARQILSGLIYL 145
N+++ + + II E T G+L Y A QI S + YL
Sbjct: 68 NLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQANAKSVIGTPEFMAP 199
+ IHRDL N + N VK+ D GL+ +M A AK I ++ AP
Sbjct: 126 EKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAP 179
Query: 200 E-LYDENYNELADIYSFGMCMLEMVTF 225
E L ++ +D+++FG+ + E+ T+
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATY 206
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 14 PDPDVLETDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLER 73
P+ D E + T +++K +G G + VY+ + L VA + + + ++E
Sbjct: 3 PNYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVA-----VKTLKEDTMEVEE 55
Query: 74 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXX 131
E ++K +KH N+++ + + II E T G+L Y
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 132 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQA 185
A QI S + YL + IHRDL N + N VK+ D GL+ +M A
Sbjct: 114 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHA 170
Query: 186 NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 171 GAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 99/239 (41%), Gaps = 40/239 (16%)
Query: 22 DPTCRYIRYKEVIGK----GAFKTVYKA--FDEVNGLEVAWCQVRIDDVLQSPEDLERLY 75
DP + R V+GK G F V KA F V++ SP +L L
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX----------- 124
SE ++LK + H ++I+ Y + Q+ + +I E GSLR +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 125 -------------XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
+A QI G+ YL ++HRDL NI + + ++
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGR-KM 189
Query: 172 KIGDLGLA--TIMEQANAKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
KI D GL+ E + K G ++MA E L+D Y +D++SFG+ + E+VT
Sbjct: 190 KISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+VIG G+F VY+A +G VA I VLQ R E+ +++ L H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQDKRFKNR---ELQIMRKLDHCNIVR 77
Query: 92 ----FYNSWIDDQNKTVNIITELFTSGSLR---QYRXXXXXXXXXXXXGWARQILSGLIY 144
FY+S +N++ + R Y + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY- 202
+HS I HRD+K N+ ++ + +K+ D G A + + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 203 -DENYNELADIYSFGMCMLEMV 223
+Y D++S G + E++
Sbjct: 196 GATDYTSSIDVWSAGCVLAELL 217
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
++G+G F VY+ + E V+ + ++ E+ SE ++K+L H +I++
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
I ++ T II EL+ G L Y ++ QI + YL S +
Sbjct: 91 IG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN-- 145
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN--AKSVIGTP-EFMAPELYD-ENYN 207
+HRD+ NI + + VK+GD GL+ +E + SV P ++M+PE + +
Sbjct: 146 CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 208 ELADIYSFGMCMLEMVTF 225
+D++ F +CM E+++F
Sbjct: 205 TASDVWMFAVCMWEILSF 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAF-----DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
I IG+G F V++ + + + C+ D ++ E+ E ++
Sbjct: 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-----EKFLQEALTMR 446
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H +I++ ++ V II EL T G LR + + +A Q+ +
Sbjct: 447 QFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGT--PEFMA 198
L YL S +HRD+ N+ ++ VK+GD GL+ ME + K+ G ++MA
Sbjct: 504 LAYLESKR--FVHRDIAARNVLVSATDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 560
Query: 199 PELYD-ENYNELADIYSFGMCMLEMV 223
PE + + +D++ FG+CM E++
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 99/239 (41%), Gaps = 40/239 (16%)
Query: 22 DPTCRYIRYKEVIGK----GAFKTVYKA--FDEVNGLEVAWCQVRIDDVLQSPEDLERLY 75
DP + R V+GK G F V KA F V++ SP +L L
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 76 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX----------- 124
SE ++LK + H ++I+ Y + Q+ + +I E GSLR +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 125 -------------XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 171
+A QI G+ YL ++HRDL NI + + ++
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGR-KM 189
Query: 172 KIGDLGLA--TIMEQANAKSVIGT--PEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 225
KI D GL+ E + K G ++MA E L+D Y +D++SFG+ + E+VT
Sbjct: 190 KISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 11 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 64
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE + GSL + A QI SG+ Y+
Sbjct: 65 KLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 121
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 122 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 178
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 179 LYG-RFTIKSDVWSFGILLTELTT 201
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
++G+G F VY+ + E V+ + ++ E+ SE ++K+L H +I++
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
I ++ T II EL+ G L Y ++ QI + YL S +
Sbjct: 79 IG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN-- 133
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN--AKSVIGTP-EFMAPELYD-ENYN 207
+HRD+ NI + + VK+GD GL+ +E + SV P ++M+PE + +
Sbjct: 134 CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 208 ELADIYSFGMCMLEMVTF 225
+D++ F +CM E+++F
Sbjct: 193 TASDVWMFAVCMWEILSF 210
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
++G+G F VY+ + E V+ + ++ E+ SE ++K+L H +I++
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
I ++ T II EL+ G L Y ++ QI + YL S +
Sbjct: 75 IG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN-- 129
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN--AKSVIGTP-EFMAPELYD-ENYN 207
+HRD+ NI + + VK+GD GL+ +E + SV P ++M+PE + +
Sbjct: 130 CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 208 ELADIYSFGMCMLEMVTF 225
+D++ F +CM E+++F
Sbjct: 189 TASDVWMFAVCMWEILSF 206
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 13 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 66
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE + GSL + A QI SG+ Y+
Sbjct: 67 KLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 123
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 124 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 180
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 181 LYG-RFTIKSDVWSFGILLTELTT 203
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX----------XXXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 78 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 136 MAYLNANK--FVHRDLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-RW 191
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 241
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 9 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE + GSL + A QI SG+ Y+
Sbjct: 63 KLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 119
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 120 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 176
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 177 LYG-RFTIKSDVWSFGILLTELTT 199
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE + GSL + A QI SG+ Y+
Sbjct: 74 KLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 188 LYG-RFTIKSDVWSFGILLTELTT 210
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQ--GEVKIGDLGLA-TIMEQANAKSVIG 192
+QIL G+ YLH ++ I+H DLK NI ++ G++KI D G++ I + ++G
Sbjct: 138 KQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMG 195
Query: 193 TPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 229
TPE++APE+ NY+ + D+++ G+ ++T P+
Sbjct: 196 TPEYLAPEIL--NYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ ++ +G G F V+ A + +V + + +E +E +++K+L+H+
Sbjct: 184 LKLEKKLGAGQFGEVWMATYNKH------TKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ + + + IITE GSL + ++ QI G+ ++
Sbjct: 238 KLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 294
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYD-E 204
+ IHRDL+ NI ++ + KI D GLA + AK I ++ APE +
Sbjct: 295 EQRN--YIHRDLRAANILVSASL-VCKIADFGLARV----GAKFPI---KWTAPEAINFG 344
Query: 205 NYNELADIYSFGMCMLEMVTF-EYPYSECRN 234
++ +D++SFG+ ++E+VT+ PY N
Sbjct: 345 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 375
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 33/182 (18%)
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 203
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 259
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 278
Query: 260 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 318
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 325
Query: 319 PA 320
P+
Sbjct: 326 PS 327
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 16/219 (7%)
Query: 35 GKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYN 94
G+G F TV ++ G+ VA I V+Q P R + L L H NI++ +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVA-----IKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQS 86
Query: 95 SWI-----DDQNKTVNIITELFTSG---SLRQYRXXXXXXXXXXXXGWARQILSGLIYLH 146
+ D ++ +N++ E R Y + Q++ + LH
Sbjct: 87 YFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH 146
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMAPELY--D 203
+ HRD+K N+ +N G +K+ D G A + + + I + + APEL +
Sbjct: 147 LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGN 206
Query: 204 ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 242
++Y DI+S G EM+ E + ++ Q+++ V
Sbjct: 207 QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 28 IRYKEVIGKGAFKTVYKAF-----DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
I IG+G F V++ + + + C+ D ++ E+ E ++
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-----EKFLQEALTMR 66
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSG 141
H +I++ ++ V II EL T G LR + + +A Q+ +
Sbjct: 67 QFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KSVIGT--PEFMA 198
L YL S +HRD+ N+ ++ VK+GD GL+ ME + K+ G ++MA
Sbjct: 124 LAYLESKR--FVHRDIAARNVLVSATDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 199 PELYD-ENYNELADIYSFGMCMLEMV 223
PE + + +D++ FG+CM E++
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 186 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE + GSL + A QI SG+ Y+
Sbjct: 240 KLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 297 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 354 LYG-RFTIKSDVWSFGILLTELTT 376
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX----------XXXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 87 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 145 MAYLNANK--FVHRDLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-RW 200
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 250
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 186 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE + GSL + A QI SG+ Y+
Sbjct: 240 KLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 297 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 354 LYG-RFTIKSDVWSFGILLTELTT 376
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE 195
+ +L+ Y+H ++ I HRD+K NI ++ N G VK+ D G + M K GT E
Sbjct: 158 KSVLNSFSYIH-NEKNICHRDVKPSNILMDKN-GRVKLSDFGESEYMVDKKIKGSRGTYE 215
Query: 196 FMAPELY--DENYN-ELADIYSFGMCMLEMVTFEYPYS 230
FM PE + + +YN DI+S G+C+ M P+S
Sbjct: 216 FMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX----------XXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 93 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 151 MAYLNANK--FVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 206
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 256
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE + GSL + A QI SG+ Y+
Sbjct: 74 KLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 131 ERMN--YVHRDLAAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 188 LYG-RFTIKSDVWSFGILLTELTT 210
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQY----------RXXXXXXXXXXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 93 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 151 MAYLNANK--FVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 206
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 256
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 53/231 (22%)
Query: 28 IRYKEVIGKGAFKTVYK-AFDE----VNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLK 82
++ E+IG+G + VYK + DE V A Q I++ ++ +
Sbjct: 15 LKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINE------------KNIYRVP 62
Query: 83 SLKHNNIIRFYNSWIDDQNKTVN------IITELFTSGSLRQYRXXXXXXXXXXXXGWAR 136
++H+NI RF + D+ T + ++ E + +GSL +Y A
Sbjct: 63 LMEHDNIARFI---VGDERVTADGRMEYLLVMEYYPNGSLXKY-LSLHTSDWVSSCRLAH 118
Query: 137 QILSGLIYLHS-------HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------- 182
+ GL YLH+ + P I HRDL N+ + N G I D GL+ +
Sbjct: 119 SVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK-NDGTCVISDFGLSMRLTGNRLVR 177
Query: 183 --EQANAK-SVIGTPEFMAPELYDENYN--------ELADIYSFGMCMLEM 222
E+ NA S +GT +MAPE+ + N + D+Y+ G+ E+
Sbjct: 178 PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K ++H
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE + GSL + A QI SG+ Y+
Sbjct: 74 KLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 188 LYG-RFTIKSDVWSFGILLTELTT 210
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX----------XXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 83 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 141 MAYLNANK--FVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 196
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 246
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX----------XXXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 84 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 142 MAYLNANK--FVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 197
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 198 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 247
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX----------XXXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 80 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 138 MAYLNANK--FVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 193
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 243
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX----------XXXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 87 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 145 MAYLNANK--FVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 200
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 250
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQY----------RXXXXXXXXXXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 86 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 144 MAYLNANK--FVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 199
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 249
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 17 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE GSL + + QI SG+ Y+
Sbjct: 71 KLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 128 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAA 184
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 185 LYG-RFTIKSDVWSFGILLTELTT 207
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX----------XXXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 86 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 144 MAYLNANK--FVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 199
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 249
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 17 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE GSL + + QI SG+ Y+
Sbjct: 71 KLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 128 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 184
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 185 LYG-RFTIKSDVWSFGILLTELTT 207
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+ E + GSL + A QI SG+ Y+
Sbjct: 74 KLVQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 187
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 188 LYG-RFTIKSDVWSFGILLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGTT----RVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE + G L + A QI SG+ Y+
Sbjct: 74 KLVQLYAV---VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 188 LYG-RFTIKSDVWSFGILLTELTT 210
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 135
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 69 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 194
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 127 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEETSSVGSKF 183
Query: 195 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 239
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 44/278 (15%)
Query: 21 TDPTCRYIRYKEVI-----GKGAFKTVYKA-----FDEVNGLEVAWCQVRIDDVLQSPED 70
+D +I+ ++++ G+GAF V+ A E + + VA + + + +D
Sbjct: 31 SDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVA-VKALKEASESARQD 89
Query: 71 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 130
+R E LL L+H +I+RF+ + + + + ++ E G L ++
Sbjct: 90 FQR---EAELLTMLQHQHIVRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL 144
Query: 131 XXG---------------WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 175
G A Q+ +G++YL +HRDL N + G VKIGD
Sbjct: 145 AGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLV-GQGLVVKIGD 201
Query: 176 LGLATIMEQANAKSVIGTP----EFMAPE--LYDENYNELADIYSFGMCMLEMVTF-EYP 228
G++ + + V G +M PE LY + E +D++SFG+ + E+ T+ + P
Sbjct: 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQP 260
Query: 229 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
+ + N+ I ++ G + + PEV + + C
Sbjct: 261 WYQLSNTEAI-DCITQG-RELERPRACPPEVYAIMRGC 296
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLK-HNNIIRF 92
+GKGA+ V+K+ D G VA +I D Q+ D +R + E+ +L L H NI+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVA--VKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPI 152
N D ++ V ++ + + R + Q++ + YLHS +
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVY--QLIKVIKYLHS--GGL 130
Query: 153 IHRDLKCDNIFINGNQGEVKIGDLGLA 179
+HRD+K NI +N + VK+ D GL+
Sbjct: 131 LHRDMKPSNILLNA-ECHVKVADFGLS 156
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLG-LATIMEQANAKS--VIGTPEFMAPELYDE 204
H +HRD+K DNI ++ N G +++ D G +ME +S +GTP++++PE+
Sbjct: 192 HQLHYVHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 205 ------NYNELADIYSFGMCMLEMVTFEYPY 229
Y D +S G+CM EM+ E P+
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 135
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 69 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 194
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 127 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 183
Query: 195 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 239
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGTT----RVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+ E + GSL + A QI SG+ Y+
Sbjct: 74 KLVQLYAV---VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 188 LYG-RFTIKSDVWSFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 187 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGNMSPEAFLQEAQVMKKLRHE 240
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+TE + GSL + A QI SG+ Y+
Sbjct: 241 KLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 297
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GL ++E + A+ P ++ APE
Sbjct: 298 ERMN--YVHRDLRAANILV-GENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAA 354
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 355 LYG-RFTIKSDVWSFGILLTELTT 377
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+ E + GSL + A QI SG+ Y+
Sbjct: 74 KLVQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 188 LYG-RFTIKSDVWSFGILLTELTT 210
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 44/278 (15%)
Query: 21 TDPTCRYIRYKEVI-----GKGAFKTVYKA-----FDEVNGLEVAWCQVRIDDVLQSPED 70
+D +I+ ++++ G+GAF V+ A E + + VA + + + +D
Sbjct: 8 SDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVA-VKALKEASESARQD 66
Query: 71 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 130
+R E LL L+H +I+RF+ + + + + ++ E G L ++
Sbjct: 67 FQR---EAELLTMLQHQHIVRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL 121
Query: 131 XXG---------------WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 175
G A Q+ +G++YL +HRDL N + G VKIGD
Sbjct: 122 AGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLV-GQGLVVKIGD 178
Query: 176 LGLATIMEQANAKSVIGTP----EFMAPE--LYDENYNELADIYSFGMCMLEMVTF-EYP 228
G++ + + V G +M PE LY + E +D++SFG+ + E+ T+ + P
Sbjct: 179 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQP 237
Query: 229 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
+ + N+ I ++ G + + PEV + + C
Sbjct: 238 WYQLSNTEAI-DCITQG-RELERPRACPPEVYAIMRGC 273
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX----------XXXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 80 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 138 MAYLNANK--FVHRDLAARNCXV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 193
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 243
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 58/261 (22%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
K +IG+G++ VY A+D+ VA +V + + + D +R+ E+ +L LK + II
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKV--NRMFEDLIDCKRILREITILNRLKSDYII 88
Query: 91 RFYNSWIDD---QNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
R Y+ I D + + I+ E+ S + ++ + IL L+ +
Sbjct: 89 RLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEH-----IKTILYNLLLGEN 143
Query: 148 --HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE---------- 195
H+ IIHRDLK N +N + VK+ D GLA + +++ E
Sbjct: 144 FIHESGIIHRDLKPANCLLNQD-CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 196 --------------FMAPE--LYDENYNELADIYSFGMCMLEMVTF-------------E 226
+ APE L ENY + DI+S G E++
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPL 262
Query: 227 YPYSEC------RNSAQIYKK 241
+P S C RNS ++++K
Sbjct: 263 FPGSSCFPLSPDRNSKKVHEK 283
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 44/278 (15%)
Query: 21 TDPTCRYIRYKEVI-----GKGAFKTVYKA-----FDEVNGLEVAWCQVRIDDVLQSPED 70
+D +I+ ++++ G+GAF V+ A E + + VA + + + +D
Sbjct: 2 SDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVA-VKALKEASESARQD 60
Query: 71 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 130
+R E LL L+H +I+RF+ + + + + ++ E G L ++
Sbjct: 61 FQR---EAELLTMLQHQHIVRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL 115
Query: 131 XXG---------------WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 175
G A Q+ +G++YL +HRDL N + G VKIGD
Sbjct: 116 AGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLV-GQGLVVKIGD 172
Query: 176 LGLATIMEQANAKSVIGTP----EFMAPE--LYDENYNELADIYSFGMCMLEMVTF-EYP 228
G++ + + V G +M PE LY + E +D++SFG+ + E+ T+ + P
Sbjct: 173 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQP 231
Query: 229 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
+ + N+ I ++ G + + PEV + + C
Sbjct: 232 WYQLSNTEAI-DCITQG-RELERPRACPPEVYAIMRGC 267
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 22/229 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
I K +G G + VY + L VA + + + ++E E ++K +KH
Sbjct: 34 ITMKHKLGGGQYGEVYVGVWKKYSLTVA-----VKTLKEDTMEVEEFLKEAAVMKEIKHP 88
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY--RXXXXXXXXXXXXGWARQILSGLIYL 145
N+++ + I+TE G+L Y A QI S + YL
Sbjct: 89 NLVQLLG--VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------EQANAKSVIGTPEFMAP 199
+ IHRDL N + N VK+ D GL+ +M A AK I ++ AP
Sbjct: 147 EKKN--FIHRDLAARNCLVGENH-VVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAP 200
Query: 200 E-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK 247
E L ++ +D+++FG+ + E+ T+ + +Q+Y + G +
Sbjct: 201 ESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYR 249
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 135
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 49 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 106
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 194
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 107 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 163
Query: 195 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 219
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 135
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 53 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 110
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 194
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 111 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 167
Query: 195 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 168 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 223
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIR 91
+G+G+F VY+ + + +V I V ++ ER+ +E ++K ++++R
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX----------XXXXXGWARQILSG 141
+ Q + +I EL T G L+ Y A +I G
Sbjct: 115 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 142 LIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEF 196
+ YL+++ +HRDL N + VKIGD G+ T + K ++ +
Sbjct: 173 MAYLNANK--FVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 228
Query: 197 MAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 245
M+PE L D + +D++SFG+ + E+ T E PY N Q+ + V G
Sbjct: 229 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG 278
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 135
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 60 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 117
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 194
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 118 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 174
Query: 195 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 175 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 230
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 16/141 (11%)
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME---QANAKSVIGTPEFMAPELYDE 204
H +HRD+K DN+ ++ N G +++ D G M + +GTP++++PE+
Sbjct: 208 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 205 ------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK----PAALSKV 254
Y D +S G+CM EM+ E P+ + + Y K+ + + P+ ++ V
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIMNHEERFQFPSHVTDV 325
Query: 255 KDPEVKSFIEKCLVPASQRLS 275
+ E K I++ + +RL
Sbjct: 326 SE-EAKDLIQRLICSRERRLG 345
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 16/141 (11%)
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME---QANAKSVIGTPEFMAPELYDE 204
H +HRD+K DN+ ++ N G +++ D G M + +GTP++++PE+
Sbjct: 192 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 205 ------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK----PAALSKV 254
Y D +S G+CM EM+ E P+ + + Y K+ + + P+ ++ V
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIMNHEERFQFPSHVTDV 309
Query: 255 KDPEVKSFIEKCLVPASQRLS 275
+ E K I++ + +RL
Sbjct: 310 SE-EAKDLIQRLICSRERRLG 329
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 186 LRLEVKLGQGCFGEVW--MGTWNGT----TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+ E + GSL + A QI SG+ Y+
Sbjct: 240 KLVQLYAV---VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 297 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 354 LYG-RFTIKSDVWSFGILLTELTT 376
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 24/202 (11%)
Query: 35 GKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF-- 92
G+G F VYK + VN VA ++ + + E ++ E+ + +H N++
Sbjct: 31 GEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW------ARQILSGLIYLH 146
++S DD + ++ +GSL W A+ +G+ +LH
Sbjct: 89 FSSDGDD----LCLVYVYXPNGSLLD---RLSCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ----ANAKSVIGTPEFMAPELY 202
+ IHRD+K NI ++ KI D GLA E+ ++GT + APE
Sbjct: 142 ENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL 198
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+DIYSFG+ +LE++T
Sbjct: 199 RGEITPKSDIYSFGVVLLEIIT 220
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 46/232 (19%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDL---ERLYSEVHLLKSLKHN 87
+ +IG G++ V +A+D++ VA I +L+ EDL +R+ E+ +L L H+
Sbjct: 58 RHLIGTGSYGHVCEAYDKLEKRVVA-----IKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 88 NIIRFYNSWID---DQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIY 144
++++ + I ++ + ++ E+ S + +R +L G+ Y
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKT-LLYNLLVGVKY 171
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM---EQANAKSVIGTPE------ 195
+HS I+HRDLK N +N + VK+ D GLA + E N++ I E
Sbjct: 172 VHSAG--ILHRDLKPANCLVNQD-CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228
Query: 196 --------------------FMAPEL--YDENYNELADIYSFGMCMLEMVTF 225
+ APEL ENY E D++S G E++
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 77 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 135
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 54 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 194
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 112 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 168
Query: 195 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 169 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 224
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ L H
Sbjct: 39 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKLNH 93
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 94 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 152 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+R + +G+G F V+ NG +V I + E E ++K L+H
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGTT----RVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX--XXXGWARQILSGLIYL 145
+++ Y + + I+ E + G L + A QI SG+ Y+
Sbjct: 74 KLVQLYAV---VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPE-- 200
+ +HRDL+ NI + G K+ D GLA ++E + A+ P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 201 LYDENYNELADIYSFGMCMLEMVT 224
LY + +D++SFG+ + E+ T
Sbjct: 188 LYG-RFTIKSDVWSFGILLTELTT 210
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ L H
Sbjct: 53 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKLNH 107
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 108 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 166 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 25/274 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+++G+GA V++ + G ++ +V + P D++ E +LK L H NI++
Sbjct: 15 DILGQGATANVFRGRHKKTG-DLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIVK 71
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW---ARQILSGLIYLHSH 148
+ + + +I E GSL + R ++ G+ +L +
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 149 DPPIIHRDLKCDNIF-INGNQGE--VKIGDLGLATIME-QANAKSVIGTPEFMAPELYD- 203
I+HR++K NI + G G+ K+ D G A +E S+ GT E++ P++Y+
Sbjct: 132 G--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYER 189
Query: 204 --------ENYNELADIYSFGMCMLEMVTFEYPYSEC---RNSAQIYKKVSSGIKPAALS 252
+ Y D++S G+ T P+ R + ++ K+ +G A+S
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249
Query: 253 KVKDPEVKSFIEKCLVPASQRLS-AKELLMDPFL 285
V+ E +P S LS ++L+ P L
Sbjct: 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVL 283
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 47/273 (17%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
+K +IG G F VYK +G +VA + +S + +E +E+ L +H ++
Sbjct: 43 HKFLIGHGVFGKVYKGVLR-DGAKVALKR----RTPESSQGIEEFETEIETLSFCRHPHL 97
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQI------LSGLI 143
+ + D++N+ + +I + +G+L+ R W +++ GL
Sbjct: 98 VSLIG-FCDERNEMI-LIYKYMENGNLK--RHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA---TIMEQANAKSVI-GTPEFMAP 199
YLH+ IIHRD+K NI ++ N KI D G++ T ++Q + V+ GT ++ P
Sbjct: 154 YLHTR--AIIHRDVKSINILLDENFVP-KITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 200 ELYDEN-YNELADIYSFGMCML---------------EMVTFEYPYSECRNSAQIYKKV- 242
E + + E +D+YSFG+ + EMV E N+ Q+ + V
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD 270
Query: 243 ---SSGIKPAALSKVKDPEVKSFIEKCLVPASQ 272
+ I+P +L K D V KCL +S+
Sbjct: 271 PNLADKIRPESLRKFGDTAV-----KCLALSSE 298
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 139/332 (41%), Gaps = 82/332 (24%)
Query: 27 YIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLE-RLYSEVHLLKSLK 85
Y ++V+G+GA V + + E A V+I + + P + R++ EV +L +
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYA---VKI--IEKQPGHIRSRVFREVEMLYQCQ 68
Query: 86 -HNNII----------RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
H N++ RFY ++ E GS+ +
Sbjct: 69 GHRNVLELIEFFEEEDRFY------------LVFEKMRGGSILSHIHKRRHFNELEASVV 116
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFI-NGNQ-GEVKIGDLGLATIMEQANAKSVIG 192
+ + S L +LH+ I HRDLK +NI + NQ VKI D GL + ++ S I
Sbjct: 117 VQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIS 174
Query: 193 TPE---------FMAPELYDEN------YNELADIYSFGMCMLEMVTFEYPY-----SEC 232
TPE +MAPE+ + Y++ D++S G+ + +++ P+ S+C
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
Query: 233 ---RNSA------QIYKKVSSGIKPAALSKVKDPE---------VKSFIEKCLVP-ASQR 273
R A +++ + G K + P+ K I K LV A QR
Sbjct: 235 GWDRGEACPACQNMLFESIQEG-------KYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287
Query: 274 LSAKELLMDPFLQVNGTTKNRPLPLPDIVLPR 305
LSA ++L P++Q G LP P +VL R
Sbjct: 288 LSAAQVLQHPWVQ--GCAPENTLPTP-MVLQR 316
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 120/276 (43%), Gaps = 29/276 (10%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+++G+GA V++ + G ++ +V + P D++ E +LK L H NI++
Sbjct: 15 DILGQGATANVFRGRHKKTG-DLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIVK 71
Query: 92 FYNSWIDDQNKTVN--IITELFTSGSLRQYRXXXXXXXXXXXXGW---ARQILSGLIYLH 146
+ I+++ T + +I E GSL + R ++ G+ +L
Sbjct: 72 LFA--IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 147 SHDPPIIHRDLKCDNIF-INGNQGE--VKIGDLGLATIME-QANAKSVIGTPEFMAPELY 202
+ I+HR++K NI + G G+ K+ D G A +E + GT E++ P++Y
Sbjct: 130 ENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMY 187
Query: 203 D---------ENYNELADIYSFGMCMLEMVTFEYPYSEC---RNSAQIYKKVSSGIKPAA 250
+ + Y D++S G+ T P+ R + ++ K+ +G A
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247
Query: 251 LSKVKDPEVKSFIEKCLVPASQRLS-AKELLMDPFL 285
+S V+ E +P S LS ++L+ P L
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVL 283
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 92/236 (38%), Gaps = 44/236 (18%)
Query: 83 SLKHNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXXXXXXXXXXXXGWARQILS 140
+KH N+++F + N V + IT GSL Y A +
Sbjct: 65 GMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHV-AETMSR 123
Query: 141 GLIYLH---------SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME----QANA 187
GL YLH H P I HRD K N+ + + V + D GLA E +
Sbjct: 124 GLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDT 182
Query: 188 KSVIGTPEFMAPELYDE--NYNELA----DIYSFGMCMLEMVT---------------FE 226
+GT +MAPE+ + N+ A D+Y+ G+ + E+V+ FE
Sbjct: 183 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFE 242
Query: 227 -----YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSA 276
+P E ++KK+ IK L ++ IE+C A RLSA
Sbjct: 243 EEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSA 298
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 39 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKFNH 93
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 94 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 152 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLP 209
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 38 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKFNH 92
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 93 QNIVRCIG--VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 151 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 261
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 39 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKFNH 93
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 94 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 152 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 53 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVYSEQDELDFLMEALIISKFNH 107
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 108 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 166 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 53 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKFNH 107
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 108 QNIVRCIG--VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 166 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 32 EVIGKGAFKTV----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
+VIG+GAF V +KA +V +++ + + + +S D + E ++
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLL---SKFEMIKRS--DSAFFWEERDIMAFANSP 135
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR----QILSGLI 143
+++ + ++ DD K + ++ E G L WA+ +++ L
Sbjct: 136 WVVQLFCAFQDD--KYLYMVMEYMPGGDLVNLMSNYDVPEK-----WAKFYTAEVVLALD 188
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ---ANAKSVIGTPEFMAPE 200
+HS +IHRD+K DN+ ++ G +K+ D G M++ + + +GTP++++PE
Sbjct: 189 AIHSMG--LIHRDVKPDNMLLD-KHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPE 245
Query: 201 LY-----DENYNELADIYSFGMCMLEMVTFEYPY 229
+ D Y D +S G+ + EM+ + P+
Sbjct: 246 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 55 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKFNH 109
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 110 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 167
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 168 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 225
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 278
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 65 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKFNH 119
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 120 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 177
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 178 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 235
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 288
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 30 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKFNH 84
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 85 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 142
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 143 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 200
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 253
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 45 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKFNH 99
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 100 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 157
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 158 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 215
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 268
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 38 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKFNH 92
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 93 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A+ G
Sbjct: 151 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 261
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 79 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKFNH 133
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 134 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A G
Sbjct: 192 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 249
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 302
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 30/233 (12%)
Query: 34 IGKGAFKTVYKAFDEVNG-------LEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKH 86
+G GAF VY+ +V+G L+VA V+ + S +D E ++ H
Sbjct: 56 LGHGAFGEVYEG--QVSGMPNDPSPLQVA---VKTLPEVCSEQDELDFLMEALIISKFNH 110
Query: 87 NNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX-------XXXXXXXXXGWARQIL 139
NI+R + Q+ I+ EL G L+ + AR I
Sbjct: 111 QNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 168
Query: 140 SGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANAKSVIGTP--- 194
G YL + IHRD+ N + G KIGD G+A + +A G
Sbjct: 169 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 226
Query: 195 -EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 245
++M PE + E + D +SFG+ + E+ + Y +++ ++ + V+SG
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 279
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 47/273 (17%)
Query: 30 YKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNI 89
+K +IG G F VYK +G +VA + +S + +E +E+ L +H ++
Sbjct: 43 HKFLIGHGVFGKVYKGVLR-DGAKVALKR----RTPESSQGIEEFETEIETLSFCRHPHL 97
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQI------LSGLI 143
+ + D++N+ + +I + +G+L+ R W +++ GL
Sbjct: 98 VSLIG-FCDERNEMI-LIYKYMENGNLK--RHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA---TIMEQANAKSVI-GTPEFMAP 199
YLH+ IIHRD+K NI ++ N KI D G++ T + Q + V+ GT ++ P
Sbjct: 154 YLHTR--AIIHRDVKSINILLDENFVP-KITDFGISKKGTELGQTHLXXVVKGTLGYIDP 210
Query: 200 ELYDEN-YNELADIYSFGMCML---------------EMVTFEYPYSECRNSAQIYKKV- 242
E + + E +D+YSFG+ + EMV E N+ Q+ + V
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD 270
Query: 243 ---SSGIKPAALSKVKDPEVKSFIEKCLVPASQ 272
+ I+P +L K D V KCL +S+
Sbjct: 271 PNLADKIRPESLRKFGDTAV-----KCLALSSE 298
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 17/198 (8%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPED--LERL-YSEVHLLKSLKHNNII 90
IG+G++ V+K + G VA I L+S +D ++++ E+ +LK LKH N++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVA-----IKKFLESEDDPVIKKIALREIRMLKQLKHPNLV 65
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDP 150
+ + + ++++ E L + Q L + + H H+
Sbjct: 66 NLLEVF--RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN- 122
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN--AKSVIGTPEFMAPELY--DENY 206
IHRD+K +NI I +K+ D G A ++ + + T + +PEL D Y
Sbjct: 123 -CIHRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 207 NELADIYSFGMCMLEMVT 224
D+++ G E+++
Sbjct: 181 GPPVDVWAIGCVFAELLS 198
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 37/237 (15%)
Query: 28 IRYKEVIGKGAFKTV-----YKAFDEVNGLEVAWCQVRIDDVLQSPEDLER--LYSEVHL 80
I K +G+GAF V Y E + + VA L+ D R + E L
Sbjct: 15 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVA------VKTLKDASDNARKDFHREAEL 68
Query: 81 LKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG------- 133
L +L+H +I++FY ++ + ++ E G L ++ G
Sbjct: 69 LTNLQHEHIVKFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 134 ------WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA 187
A+QI +G++YL S +HRDL N + G VKIGD G++ + +
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLV-GENLLVKIGDFGMSRDVYSTDY 183
Query: 188 KSVIGTP----EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQI 238
V G +M PE + + +D++S G+ + E+ T+ + P+ + N+ I
Sbjct: 184 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 240
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ + IGKG F V + G +VA ++ D Q+ +E ++ L+H+
Sbjct: 23 LKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQA------FLAEASVMTQLRHS 74
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX--XXGWARQILSGLIYL 145
N+++ ++++ + I+TE GSL Y ++ + + YL
Sbjct: 75 NLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-EFMAPE-LYD 203
++ +HRDL N+ ++ + K+ D GL E ++ + P ++ APE L +
Sbjct: 134 EGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTK--EASSTQDTGKLPVKWTAPEALRE 188
Query: 204 ENYNELADIYSFGMCMLEMVTF-EYPY 229
+ ++ +D++SFG+ + E+ +F PY
Sbjct: 189 KKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ + IGKG F V + G +VA ++ D Q+ +E ++ L+H+
Sbjct: 195 LKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQA------FLAEASVMTQLRHS 246
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX--XXGWARQILSGLIYL 145
N+++ ++++ + I+TE GSL Y ++ + + YL
Sbjct: 247 NLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-EFMAPE-LYD 203
++ +HRDL N+ ++ + K+ D GL E ++ + P ++ APE L +
Sbjct: 306 EGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTK--EASSTQDTGKLPVKWTAPEALRE 360
Query: 204 ENYNELADIYSFGMCMLEMVTF-EYPY 229
+ ++ +D++SFG+ + E+ +F PY
Sbjct: 361 KKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ + IGKG F V + G +VA ++ D Q+ +E ++ L+H+
Sbjct: 8 LKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQA------FLAEASVMTQLRHS 59
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX--XXGWARQILSGLIYL 145
N+++ ++++ + I+TE GSL Y ++ + + YL
Sbjct: 60 NLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-EFMAPE-LYD 203
++ +HRDL N+ ++ + K+ D GL E ++ + P ++ APE L +
Sbjct: 119 EGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTK--EASSTQDTGKLPVKWTAPEALRE 173
Query: 204 ENYNELADIYSFGMCMLEMVTF-EYPY 229
+ ++ +D++SFG+ + E+ +F PY
Sbjct: 174 KKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQANAKSVIGT 193
R I + + +LHSH+ I HRD+K +N+ + + +K+ D G A Q ++ T
Sbjct: 116 RDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 173
Query: 194 PEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALS 252
P ++APE L E Y++ D++S G+ M ++ P+ Y I P
Sbjct: 174 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF---------YSNTGQAISPGMKR 224
Query: 253 KVK-------DPE-------VKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPL 296
+++ +PE K I L ++RL+ + + P++ + PL
Sbjct: 225 RIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 283
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 136 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQANAKSVIGT 193
R I + + +LHSH+ I HRD+K +N+ + + +K+ D G A Q ++ T
Sbjct: 135 RDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 192
Query: 194 PEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALS 252
P ++APE L E Y++ D++S G+ M ++ P+ Y I P
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF---------YSNTGQAISPGMKR 243
Query: 253 KVK-------DPE-------VKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPL 296
+++ +PE K I L ++RL+ + + P++ + PL
Sbjct: 244 RIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 302
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 134 WAR----QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ---AN 186
WAR +++ L +HS IHRD+K DN+ ++ G +K+ D G M +
Sbjct: 169 WARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVR 225
Query: 187 AKSVIGTPEFMAPELY-----DENYNELADIYSFGMCMLEMVTFEYPY 229
+ +GTP++++PE+ D Y D +S G+ + EM+ + P+
Sbjct: 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 134 WAR----QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ---AN 186
WAR +++ L +HS IHRD+K DN+ ++ G +K+ D G M +
Sbjct: 174 WARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVR 230
Query: 187 AKSVIGTPEFMAPELY-----DENYNELADIYSFGMCMLEMVTFEYPY 229
+ +GTP++++PE+ D Y D +S G+ + EM+ + P+
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 134 WAR----QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ---AN 186
WAR +++ L +HS IHRD+K DN+ ++ G +K+ D G M +
Sbjct: 174 WARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVR 230
Query: 187 AKSVIGTPEFMAPELY-----DENYNELADIYSFGMCMLEMVTFEYPY 229
+ +GTP++++PE+ D Y D +S G+ + EM+ + P+
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 19/207 (9%)
Query: 28 IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN 87
++ + IGKG F V + G +VA ++ D Q+ +E ++ L+H+
Sbjct: 14 LKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQA------FLAEASVMTQLRHS 65
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX--XXGWARQILSGLIYL 145
N+++ ++++ + I+TE GSL Y ++ + + YL
Sbjct: 66 NLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 146 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP-EFMAPE-LYD 203
++ +HRDL N+ ++ + K+ D GL E ++ + P ++ APE L +
Sbjct: 125 EGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTK--EASSTQDTGKLPVKWTAPEALRE 179
Query: 204 ENYNELADIYSFGMCMLEMVTF-EYPY 229
++ +D++SFG+ + E+ +F PY
Sbjct: 180 AAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 138/332 (41%), Gaps = 82/332 (24%)
Query: 27 YIRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLE-RLYSEVHLLKSLK 85
Y ++V+G+GA V + + E A V+I + + P + R++ EV +L +
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYA---VKI--IEKQPGHIRSRVFREVEMLYQCQ 68
Query: 86 -HNNII----------RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW 134
H N++ RFY ++ E GS+ +
Sbjct: 69 GHRNVLELIEFFEEEDRFY------------LVFEKMRGGSILSHIHKRRHFNELEASVV 116
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFI-NGNQ-GEVKIGDLGLATIMEQANAKSVIG 192
+ + S L +LH+ I HRDLK +NI + NQ VKI D L + ++ S I
Sbjct: 117 VQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 193 TPE---------FMAPELYDEN------YNELADIYSFGMCMLEMVTFEYPY-----SEC 232
TPE +MAPE+ + Y++ D++S G+ + +++ P+ S+C
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
Query: 233 ---RNSA------QIYKKVSSGIKPAALSKVKDPE---------VKSFIEKCLV-PASQR 273
R A +++ + G K + P+ K I K LV A QR
Sbjct: 235 GWDRGEACPACQNMLFESIQEG-------KYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287
Query: 274 LSAKELLMDPFLQVNGTTKNRPLPLPDIVLPR 305
LSA ++L P++Q G LP P +VL R
Sbjct: 288 LSAAQVLQHPWVQ--GCAPENTLPTP-MVLQR 316
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 42/227 (18%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
K +IG+G++ VY A+D+ VA +V + + + D +R+ E+ +L LK + II
Sbjct: 33 KHLIGRGSYGYVYLAYDKNANKNVAIKKV--NRMFEDLIDCKRILREITILNRLKSDYII 90
Query: 91 RFYNSWIDD---QNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
R ++ I + + + I+ E+ S + ++ + IL L+
Sbjct: 91 RLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQH-----VKTILYNLLLGEK 145
Query: 148 --HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME---------------------- 183
H+ IIHRDLK N +N + VKI D GLA +
Sbjct: 146 FIHESGIIHRDLKPANCLLNQD-CSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 184 -----QANAKSVIGTPEFMAPE--LYDENYNELADIYSFGMCMLEMV 223
+ S + T + APE L ENY DI+S G E++
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRF 92
IG+G F V+KA G +VA +V +++ + P R E+ +L+ LKH N++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 82
Query: 93 Y---NSWIDDQNKTVNIITELF------TSGSLRQYRXXXXXXXXXXXXGWARQILSGLI 143
+ N+ I +F +G L + +L+GL
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV---MQMLLNGLY 139
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN------AKSVIGTPEFM 197
Y+H + I+HRD+K N+ I + G +K+ D GLA A + + T +
Sbjct: 140 YIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 198 APELY--DENYNELADIYSFGMCMLEMVT 224
PEL + +Y D++ G M EM T
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRF 92
IG+G F V+KA G +VA +V +++ + P R E+ +L+ LKH N++
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 81
Query: 93 Y---NSWIDDQNKTVNIITELF------TSGSLRQYRXXXXXXXXXXXXGWARQILSGLI 143
+ N+ I +F +G L + +L+GL
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV---MQMLLNGLY 138
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN------AKSVIGTPEFM 197
Y+H + I+HRD+K N+ I + G +K+ D GLA A + + T +
Sbjct: 139 YIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 198 APELY--DENYNELADIYSFGMCMLEMVT 224
PEL + +Y D++ G M EM T
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ---SPEDLERLYSEVHLLKSLKHN-NI 89
+G+GAF V +A D + A C+ +L+ + + L SE+ +L + H+ N+
Sbjct: 26 LGRGAFGQVIEA-DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG---------------- 133
+ + + +ITE G+L Y
Sbjct: 85 VNLLGA-CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQAN 186
++ Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +
Sbjct: 144 YSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 187 AKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSS 244
A+ + ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++
Sbjct: 201 ARLPL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 245 GIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 289
G + A PE+ + C SQR + EL+ + LQ N
Sbjct: 258 GTRMRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 129/321 (40%), Gaps = 55/321 (17%)
Query: 15 DPDVLETDPTCRYIRY--------------KEVIGKGAFKTVYKAFDEVNGLEVAWCQVR 60
DPD L D C + Y + +G+GAF V +A D + A C+
Sbjct: 2 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEA-DAFGIDKTATCRTV 60
Query: 61 IDDVLQ---SPEDLERLYSEVHLLKSLKHN-NIIRFYNSWIDDQNKTVNIITELFTSGSL 116
+L+ + + L SE+ +L + H+ N++ + + +I E G+L
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNL 119
Query: 117 RQYRXXXXXXXXXXXXG----------------WARQILSGLIYLHSHDPPIIHRDLKCD 160
Y ++ Q+ G+ +L S IHRDL
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAAR 177
Query: 161 NIFINGNQGEVKIGDLGLAT-------IMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
NI ++ + VKI D GLA + + +A+ + ++MAPE ++D Y +D+
Sbjct: 178 NILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPL---KWMAPETIFDRVYTIQSDV 233
Query: 213 YSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPA 270
+SFG+ + E+ + PY + + +++ G + A PE+ + C
Sbjct: 234 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTMLDCWHGEP 292
Query: 271 SQRLSAKELL--MDPFLQVNG 289
SQR + EL+ + LQ N
Sbjct: 293 SQRPTFSELVEHLGNLLQANA 313
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 129/320 (40%), Gaps = 54/320 (16%)
Query: 15 DPDVLETDPTCRYIRY--------------KEVIGKGAFKTVYKAFDEVNGLEVAWCQVR 60
DPD L D C + Y + +G+GAF V +A D + A C+
Sbjct: 3 DPDELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEA-DAFGIDKTATCRTV 61
Query: 61 IDDVLQ---SPEDLERLYSEVHLLKSLKHN-NIIRFYNSWIDDQNKTVNIITELFTSGSL 116
+L+ + + L SE+ +L + H+ N++ + + +I E G+L
Sbjct: 62 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNL 120
Query: 117 RQYRXXXXX---------------XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDN 161
Y ++ Q+ G+ +L S IHRDL N
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARN 178
Query: 162 IFINGNQGEVKIGDLGLAT-------IMEQANAKSVIGTPEFMAPE-LYDENYNELADIY 213
I ++ + VKI D GLA + + +A+ + ++MAPE ++D Y +D++
Sbjct: 179 ILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARLPL---KWMAPETIFDRVYTIQSDVW 234
Query: 214 SFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPAS 271
SFG+ + E+ + PY + + +++ G + A PE+ + C S
Sbjct: 235 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTMLDCWHGEPS 293
Query: 272 QRLSAKELL--MDPFLQVNG 289
QR + EL+ + LQ N
Sbjct: 294 QRPTFSELVEHLGNLLQANA 313
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRF 92
IG+G F V+KA G +VA +V +++ + P R E+ +L+ LKH N++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 82
Query: 93 Y---NSWIDDQNKTVNIITELF------TSGSLRQYRXXXXXXXXXXXXGWARQILSGLI 143
+ N+ I +F +G L + +L+GL
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV---MQMLLNGLY 139
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN------AKSVIGTPEFM 197
Y+H + I+HRD+K N+ I + G +K+ D GLA A + + T +
Sbjct: 140 YIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 198 APELY--DENYNELADIYSFGMCMLEMVT 224
PEL + +Y D++ G M EM T
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 129/321 (40%), Gaps = 55/321 (17%)
Query: 15 DPDVLETDPTCRYIRY--------------KEVIGKGAFKTVYKAFDEVNGLEVAWCQVR 60
DPD L D C + Y + +G+GAF V +A D + A C+
Sbjct: 2 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEA-DAFGIDKTATCRTV 60
Query: 61 IDDVLQ---SPEDLERLYSEVHLLKSLKHN-NIIRFYNSWIDDQNKTVNIITELFTSGSL 116
+L+ + + L SE+ +L + H+ N++ + + +I E G+L
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNL 119
Query: 117 RQYRXXXXXXXXXXXXG----------------WARQILSGLIYLHSHDPPIIHRDLKCD 160
Y ++ Q+ G+ +L S IHRDL
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAAR 177
Query: 161 NIFINGNQGEVKIGDLGLAT-------IMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
NI ++ + VKI D GLA + + +A+ + ++MAPE ++D Y +D+
Sbjct: 178 NILLS-EKNVVKICDFGLARDIYKDPDXVRKGDARLPL---KWMAPETIFDRVYTIQSDV 233
Query: 213 YSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPA 270
+SFG+ + E+ + PY + + +++ G + A PE+ + C
Sbjct: 234 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTMLDCWHGEP 292
Query: 271 SQRLSAKELL--MDPFLQVNG 289
SQR + EL+ + LQ N
Sbjct: 293 SQRPTFSELVEHLGNLLQANA 313
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 112/282 (39%), Gaps = 33/282 (11%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN--IIR 91
IG G V++ +E + A V +++ + L+ +E+ L L+ ++ IIR
Sbjct: 64 IGSGGSSKVFQVLNEKKQI-YAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 92 FYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
Y+ I DQ I + G+ L + + + +L + +H H
Sbjct: 121 LYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV----IGTPEFMAPELYDE- 204
I+H DLK N I G +K+ D G+A M+ V +GT +M PE +
Sbjct: 176 --IVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 205 -----------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSK 253
+ +D++S G + M + P+ + N +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 291
Query: 254 VKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQVNGTTKNR 294
+ + +++ ++ CL QR+S ELL P++Q+ N+
Sbjct: 292 IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 333
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 129/321 (40%), Gaps = 55/321 (17%)
Query: 15 DPDVLETDPTCRYIRY--------------KEVIGKGAFKTVYKAFDEVNGLEVAWCQVR 60
DPD L D C + Y + +G+GAF V +A D + A C+
Sbjct: 4 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEA-DAFGIDKTATCRTV 62
Query: 61 IDDVLQ---SPEDLERLYSEVHLLKSLKHN-NIIRFYNSWIDDQNKTVNIITELFTSGSL 116
+L+ + + L SE+ +L + H+ N++ + + +I E G+L
Sbjct: 63 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNL 121
Query: 117 RQYRXXXXXXXXXXXXG----------------WARQILSGLIYLHSHDPPIIHRDLKCD 160
Y ++ Q+ G+ +L S IHRDL
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAAR 179
Query: 161 NIFINGNQGEVKIGDLGLAT-------IMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
NI ++ + VKI D GLA + + +A+ + ++MAPE ++D Y +D+
Sbjct: 180 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPL---KWMAPETIFDRVYTIQSDV 235
Query: 213 YSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPA 270
+SFG+ + E+ + PY + + +++ G + A PE+ + C
Sbjct: 236 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTMLDCWHGEP 294
Query: 271 SQRLSAKELL--MDPFLQVNG 289
SQR + EL+ + LQ N
Sbjct: 295 SQRPTFSELVEHLGNLLQANA 315
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 21/206 (10%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNII-- 90
IG+G F V+KA G +VA +V +++ + P R E+ +L+ LKH N++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 82
Query: 91 ----RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLH 146
R S + ++ ++ + + +L+GL Y+H
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 147 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN------AKSVIGTPEFMAPE 200
+ I+HRD+K N+ I + G +K+ D GLA A + + T + PE
Sbjct: 143 RNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 201 LY--DENYNELADIYSFGMCMLEMVT 224
L + +Y D++ G M EM T
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 29/261 (11%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQV-------RIDDVLQSPEDLERLYSEVHLLKS 83
+ I G++ V D G+ VA +V R ++L +R+ E+ LL
Sbjct: 27 QRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNH 85
Query: 84 LKHNNIIRFYNSWIDDQNKTVN---IITELFTSGSLRQYRXXXXXXXXXXXXGWARQILS 140
H NI+ + ++ + ++ ++TEL + + + IL
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILL 145
Query: 141 GLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI-MEQANAKSVIGTPEFMAP 199
GL LH + ++HRDL NI + N ++ I D LA AN + + AP
Sbjct: 146 GLHVLH--EAGVVHRDLHPGNILLADN-NDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 200 ELYDE--NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD- 256
EL + + +L D++S G M EM + + Y +++ ++ K++D
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEM----FNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 257 -----PEVKSFIEKCL--VPA 270
P + ++ L VPA
Sbjct: 259 VMFSSPSARDYLRNSLSNVPA 279
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ---SPEDLERLYSEVHLLKSLKHN-NI 89
+G+GAF V +A D + A C+ +L+ + + L SE+ +L + H+ N+
Sbjct: 26 LGRGAFGQVIEA-DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG---------------- 133
+ + + +ITE G+L Y
Sbjct: 85 VNLLGA-CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQAN 186
++ Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +
Sbjct: 144 YSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 187 AKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSS 244
A+ + ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++
Sbjct: 201 ARLPL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 245 GIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 289
G + A PE+ + C SQR + EL+ + LQ N
Sbjct: 258 GTRMRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 29/261 (11%)
Query: 31 KEVIGKGAFKTVYKAFDEVNGLEVAWCQV-------RIDDVLQSPEDLERLYSEVHLLKS 83
+ I G++ V D G+ VA +V R ++L +R+ E+ LL
Sbjct: 27 QRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNH 85
Query: 84 LKHNNIIRFYNSWIDDQNKTVN---IITELFTSGSLRQYRXXXXXXXXXXXXGWARQILS 140
H NI+ + ++ + ++ ++TEL + + + IL
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILL 145
Query: 141 GLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI-MEQANAKSVIGTPEFMAP 199
GL LH + ++HRDL NI + N ++ I D LA AN + + AP
Sbjct: 146 GLHVLH--EAGVVHRDLHPGNILLADN-NDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 200 ELYDE--NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD- 256
EL + + +L D++S G M EM + + Y +++ ++ K++D
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEM----FNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 257 -----PEVKSFIEKCL--VPA 270
P + ++ L VPA
Sbjct: 259 VMFSSPSARDYLRNSLSNVPA 279
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 129/321 (40%), Gaps = 55/321 (17%)
Query: 15 DPDVLETDPTCRYIRY--------------KEVIGKGAFKTVYKAFDEVNGLEVAWCQVR 60
DPD L D C + Y + +G+GAF V +A D + A C+
Sbjct: 2 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEA-DAFGIDKTATCRTV 60
Query: 61 IDDVLQ---SPEDLERLYSEVHLLKSLKHN-NIIRFYNSWIDDQNKTVNIITELFTSGSL 116
+L+ + + L SE+ +L + H+ N++ + + +I E G+L
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNL 119
Query: 117 RQYRXXXXXXXXXXXXG----------------WARQILSGLIYLHSHDPPIIHRDLKCD 160
Y ++ Q+ G+ +L S IHRDL
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAAR 177
Query: 161 NIFINGNQGEVKIGDLGLAT-------IMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
NI ++ + VKI D GLA + + +A+ + ++MAPE ++D Y +D+
Sbjct: 178 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPL---KWMAPETIFDRVYTIQSDV 233
Query: 213 YSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPA 270
+SFG+ + E+ + PY + + +++ G + A PE+ + C
Sbjct: 234 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTMLDCWHGEP 292
Query: 271 SQRLSAKELL--MDPFLQVNG 289
SQR + EL+ + LQ N
Sbjct: 293 SQRPTFSELVEHLGNLLQANA 313
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 129/321 (40%), Gaps = 55/321 (17%)
Query: 15 DPDVLETDPTCRYIRY--------------KEVIGKGAFKTVYKAFDEVNGLEVAWCQVR 60
DPD L D C + Y + +G+GAF V +A D + A C+
Sbjct: 39 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEA-DAFGIDKTATCRTV 97
Query: 61 IDDVLQ---SPEDLERLYSEVHLLKSLKHN-NIIRFYNSWIDDQNKTVNIITELFTSGSL 116
+L+ + + L SE+ +L + H+ N++ + + +I E G+L
Sbjct: 98 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNL 156
Query: 117 RQYRXXXXXXXXXXXXG----------------WARQILSGLIYLHSHDPPIIHRDLKCD 160
Y ++ Q+ G+ +L S IHRDL
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAAR 214
Query: 161 NIFINGNQGEVKIGDLGLAT-------IMEQANAKSVIGTPEFMAPE-LYDENYNELADI 212
NI ++ + VKI D GLA + + +A+ + ++MAPE ++D Y +D+
Sbjct: 215 NILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPL---KWMAPETIFDRVYTIQSDV 270
Query: 213 YSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPA 270
+SFG+ + E+ + PY + + +++ G + A PE+ + C
Sbjct: 271 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTMLDCWHGEP 329
Query: 271 SQRLSAKELL--MDPFLQVNG 289
SQR + EL+ + LQ N
Sbjct: 330 SQRPTFSELVEHLGNLLQANA 350
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ---SPEDLERLYSEVHLLKSLKHN-NI 89
+G+GAF V +A D + A C+ +L+ + + L SE+ +L + H+ N+
Sbjct: 26 LGRGAFGQVIEA-DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG---------------- 133
+ + + +ITE G+L Y
Sbjct: 85 VNLLGA-CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQAN 186
++ Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +
Sbjct: 144 YSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 187 AKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSS 244
A+ + ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++
Sbjct: 201 ARLPL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 245 GIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 289
G + A PE+ + C SQR + EL+ + LQ N
Sbjct: 258 GTRMRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 113/275 (41%), Gaps = 33/275 (12%)
Query: 14 PDPDVLETDPTCRY--IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDL 71
PDP + P + I++++VIG+G F V KA + +GL + R+ + S +D
Sbjct: 4 PDPTIY---PVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDH 59
Query: 72 ERLYSEVHLLKSLKHN-NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY----------- 119
E+ +L L H+ NII + + + + E G+L +
Sbjct: 60 RDFAGELEVLCKLGHHPNIINLLGA--CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 117
Query: 120 -----RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIG 174
+A + G+ YL IHRDL NI + G KI
Sbjct: 118 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILV-GENYVAKIA 174
Query: 175 DLGLATIMEQANAKSVIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSE 231
D GL+ E K++ P +MA E L Y +D++S+G+ + E+V+ PY
Sbjct: 175 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 234
Query: 232 CRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 266
A++Y+K+ G + D EV + +C
Sbjct: 235 -MTCAELYEKLPQGYRLEKPLNCDD-EVYDLMRQC 267
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 114/278 (41%), Gaps = 39/278 (14%)
Query: 14 PDPDVLETDPTCRY--IRYKEVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDL 71
PDP + P + I++++VIG+G F V KA + +GL + R+ + S +D
Sbjct: 14 PDPTIY---PVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDH 69
Query: 72 ERLYSEVHLLKSLKHN-NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY----------- 119
E+ +L L H+ NII + + + + E G+L +
Sbjct: 70 RDFAGELEVLCKLGHHPNIINLLGA--CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 127
Query: 120 -----RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIG 174
+A + G+ YL IHRDL NI + G KI
Sbjct: 128 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILV-GENYVAKIA 184
Query: 175 DLGLATIMEQANAKSVIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSE 231
D GL+ E K++ P +MA E L Y +D++S+G+ + E+V+ PY
Sbjct: 185 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244
Query: 232 CRNSAQIYKKVSSGI---KPAALSKVKDPEVKSFIEKC 266
A++Y+K+ G KP D EV + +C
Sbjct: 245 -MTCAELYEKLPQGYRLEKPLNC----DDEVYDLMRQC 277
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NII+ ++ D +KT ++ E + +Q + ++L L Y HS
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQ---LYQILTDFDIRFYMYELLKALDYCHS 150
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELY--DE 204
I+HRD+K N+ I+ Q ++++ D GLA A +V + + F PEL +
Sbjct: 151 --KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 205 NYNELADIYSFGMCMLEMVTF 225
Y+ D++S G CML + F
Sbjct: 209 MYDYSLDMWSLG-CMLASMIF 228
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN--IIR 91
IG G V++ +E + A V +++ + L+ +E+ L L+ ++ IIR
Sbjct: 64 IGSGGSSKVFQVLNEKKQI-YAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 92 FYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
Y+ I DQ I + G+ L + + + +L + +H H
Sbjct: 121 LYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV----IGTPEFMAPELYDE- 204
I+H DLK N I G +K+ D G+A M+ V +GT +M PE +
Sbjct: 176 --IVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 205 -----------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSK 253
+ +D++S G + M + P+ + N +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 291
Query: 254 VKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQV 287
+ + +++ ++ CL QR+S ELL P++Q+
Sbjct: 292 IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 147
NII+ ++ D +KT ++ E + +Q + ++L L Y HS
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQ---LYQILTDFDIRFYMYELLKALDYCHS 155
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELY--DE 204
I+HRD+K N+ I+ Q ++++ D GLA A +V + + F PEL +
Sbjct: 156 --KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 205 NYNELADIYSFGMCMLEMVTF 225
Y+ D++S G CML + F
Sbjct: 214 MYDYSLDMWSLG-CMLASMIF 233
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 17/196 (8%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHN-NIIRF 92
+G+G + V++A + N +V V+I P ++ E+ +L++L+ NII
Sbjct: 45 LGRGKYSEVFEAINITNNEKVV---VKI----LKPVKKNKIKREIKILENLRGGPNIITL 97
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPI 152
+ D ++T ++ E + +Q + +IL L Y HS I
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMG--I 152
Query: 153 IHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELY--DENYNEL 209
+HRD+K N+ I+ ++++ D GLA +V + + F PEL + Y+
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 210 ADIYSFGMCMLEMVTF 225
D++S G CML + F
Sbjct: 213 LDMWSLG-CMLASMIF 227
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 126/314 (40%), Gaps = 52/314 (16%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN--IIR 91
IG G V++ +E + A V +++ + L+ +E+ L L+ ++ IIR
Sbjct: 16 IGSGGSSKVFQVLNEKKQI-YAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIR 72
Query: 92 FYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
Y+ I DQ I + G+ L + + + +L + +H H
Sbjct: 73 LYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 127
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV----IGTPEFMAPELYDE- 204
I+H DLK N I G +K+ D G+A M+ V +GT +M PE +
Sbjct: 128 --IVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 205 -----------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP---AA 250
+ +D++S G + M + P+ + N K+ + I P
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIE 240
Query: 251 LSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQVN---------GTTKNRPLPLPD 300
+ + +++ ++ CL QR+S ELL P++Q+ GTT+ L
Sbjct: 241 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQ 300
Query: 301 IV----LPRVGAFG 310
+V +PR A G
Sbjct: 301 LVGLNLVPRGSAAG 314
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 20/209 (9%)
Query: 31 KEVIGKGAFKTVYKAFDE-VNGLEVAWCQVRIDDVLQSPEDLERLYSEV--HLLKSLKHN 87
K I G +Y A D VNG V + ++ S + + + L + H
Sbjct: 85 KGCIAHGGLGWIYLALDRNVNGRPVV-----LKGLVHSGDAEAQAMAMAERQFLAEVVHP 139
Query: 88 NIIRFYN--SWIDDQNKTVNIITELFTSG-SLRQYRXXXXXXXXXXXXGWARQILSGLIY 144
+I++ +N D V I + G SL+ R + +IL L Y
Sbjct: 140 SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK--RSKGQKLPVAEAIAYLLEILPALSY 197
Query: 145 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE 204
LHS +++ DLK +NI + Q +K+ DLG + + + GTP F APE+
Sbjct: 198 LHSIG--LVYNDLKPENIMLTEEQ--LKLIDLGAVSRINSFG--YLYGTPGFQAPEIVRT 251
Query: 205 NYNELADIYSFGMCMLEMVTFEYPYSECR 233
DIY+ G L +T + P R
Sbjct: 252 GPTVATDIYTVGRT-LAALTLDLPTRNGR 279
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 189
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 152 QVAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 190 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 209 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTR 265
Query: 248 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 289
A PE+ + C SQR + EL+ + LQ N
Sbjct: 266 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSLKHNNIIR 91
+G G F +V + + ++ V I + Q E D E + E ++ L + I+R
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQI---DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG-WARQILSGLIYLHSHDP 150
Q + + ++ E+ G L ++ Q+ G+ YL +
Sbjct: 401 LIGV---CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN- 456
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTP-EFMAPELYD-E 204
+HR+L N+ + N+ KI D GL+ + A+S P ++ APE +
Sbjct: 457 -FVHRNLAARNVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 205 NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 264
++ +D++S+G+ M E +++ G KP K+K PEV +FIE
Sbjct: 515 KFSSRSDVWSYGVTMWEALSY-------------------GQKP--YKKMKGPEVMAFIE 553
Query: 265 K 265
+
Sbjct: 554 Q 554
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 116/285 (40%), Gaps = 39/285 (13%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN--IIR 91
IG G V++ +E + A V +++ + L+ +E+ L L+ ++ IIR
Sbjct: 36 IGSGGSSKVFQVLNEKKQI-YAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIR 92
Query: 92 FYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
Y+ I DQ I + G+ L + + + +L + +H H
Sbjct: 93 LYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 147
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV----IGTPEFMAPELYDE- 204
I+H DLK N I G +K+ D G+A M+ V +GT +M PE +
Sbjct: 148 --IVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 205 -----------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP---AA 250
+ +D++S G + M + P+ + N K+ + I P
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIE 260
Query: 251 LSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQVNGTTKNR 294
+ + +++ ++ CL QR+S ELL P++Q+ N+
Sbjct: 261 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 305
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 189
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 206 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 190 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 263 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 319
Query: 248 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 289
A PE+ + C SQR + EL+ + LQ N
Sbjct: 320 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 363
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 189
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 208 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 190 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 265 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 321
Query: 248 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 289
A PE+ + C SQR + EL+ + LQ N
Sbjct: 322 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 365
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 189
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 156 QVAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 190 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 213 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 248 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 289
A PE+ + C SQR + EL+ + LQ N
Sbjct: 270 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 120/288 (41%), Gaps = 41/288 (14%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQ---SPEDLERLYSEVHLLKSLKHN-NI 89
+G+GAF V +A D + A C+ +L+ + + L SE+ +L + H+ N+
Sbjct: 26 LGRGAFGQVIEA-DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 90 IRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG---------------- 133
+ + + +I E G+L Y
Sbjct: 85 VNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQAN 186
++ Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +
Sbjct: 144 YSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 187 AKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSS 244
A+ + ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++
Sbjct: 201 ARLPL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 245 GIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 289
G + A PE+ + C SQR + EL+ + LQ N
Sbjct: 258 GTRMRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 116/285 (40%), Gaps = 39/285 (13%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN--IIR 91
IG G V++ +E + A V +++ + L+ +E+ L L+ ++ IIR
Sbjct: 20 IGSGGSSKVFQVLNEKKQI-YAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIR 76
Query: 92 FYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
Y+ I DQ I + G+ L + + + +L + +H H
Sbjct: 77 LYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 131
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV----IGTPEFMAPELYDE- 204
I+H DLK N I G +K+ D G+A M+ V +GT +M PE +
Sbjct: 132 --IVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 205 -----------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP---AA 250
+ +D++S G + M + P+ + N K+ + I P
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIE 244
Query: 251 LSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQVNGTTKNR 294
+ + +++ ++ CL QR+S ELL P++Q+ N+
Sbjct: 245 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 289
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSLKHNNIIR 91
+G G F +V + + ++ V I + Q E D E + E ++ L + I+R
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQI---DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 92 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG-WARQILSGLIYLHSHDP 150
Q + + ++ E+ G L ++ Q+ G+ YL +
Sbjct: 75 LIGV---CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN- 130
Query: 151 PIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTP-EFMAPELYD-E 204
+HRDL N+ + N+ KI D GL+ + A+S P ++ APE +
Sbjct: 131 -FVHRDLAARNVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 205 NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 264
++ +D++S+G+ M E +++ G KP K+K PEV +FIE
Sbjct: 189 KFSSRSDVWSYGVTMWEALSY-------------------GQKP--YKKMKGPEVMAFIE 227
Query: 265 K 265
+
Sbjct: 228 Q 228
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 148 HDPPIIHRDLKCDNIFINGNQGEVKIGDLG-LATIMEQANAKSV--IGTPEFMAPELYDE 204
H +HRD+K DNI ++ G +++ D G + +S+ +GTP++++PE+
Sbjct: 179 HRLGYVHRDIKPDNILLD-RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 205 NYNEL--------ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD 256
D ++ G+ EM + P+ ++A+ Y K+ + +L V +
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY-ADSTAETYGKIVHYKEHLSLPLVDE 296
Query: 257 ---PEVKSFIEKCLVPASQRL---SAKELLMDPF---LQVNGTTKNRPLPLPDI 301
E + FI++ L P RL A + PF L +G + P PD
Sbjct: 297 GVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPPFTPDF 350
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 39/278 (14%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN--IIR 91
IG G V++ +E + A V +++ + L+ +E+ L L+ ++ IIR
Sbjct: 17 IGSGGSSKVFQVLNEKKQI-YAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIR 73
Query: 92 FYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
Y+ I DQ I + G+ L + + + +L + +H H
Sbjct: 74 LYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 128
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV----IGTPEFMAPELYDE- 204
I+H DLK N I G +K+ D G+A M+ V +GT +M PE +
Sbjct: 129 --IVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 205 -----------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP---AA 250
+ +D++S G + M + P+ + N K+ + I P
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEIE 241
Query: 251 LSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQV 287
+ + +++ ++ CL QR+S ELL P++Q+
Sbjct: 242 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 189
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 199 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 190 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 256 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 312
Query: 248 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 289
A PE+ + C SQR + EL+ + LQ N
Sbjct: 313 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 356
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 189
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 201 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 190 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 258 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 314
Query: 248 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 289
A PE+ + C SQR + EL+ + LQ N
Sbjct: 315 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 358
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 189
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 152 QVAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 190 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 209 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 265
Query: 248 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 289
A PE+ + C SQR + EL+ + LQ N
Sbjct: 266 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 21/213 (9%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLE-RLYSEVHLLKSLKHNNII 90
E IG+G F V+ + VA R + L P DL+ + E +LK H NI+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR--ETL--PPDLKAKFLQEARILKQYSHPNIV 175
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
R + Q + + I+ EL G + R +G+ YL S
Sbjct: 176 RLIG--VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG-----TP-EFMAPELYD 203
IHRDL N + + +KI D G++ E+A+ P ++ APE +
Sbjct: 234 --CIHRDLAARNCLVT-EKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 204 EN-YNELADIYSFGMCMLEMVTF-EYPYSECRN 234
Y+ +D++SFG+ + E + PY N
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 109/275 (39%), Gaps = 33/275 (12%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN--IIR 91
IG G V++ +E + A V +++ + L+ +E+ L L+ ++ IIR
Sbjct: 64 IGSGGSSKVFQVLNEKKQI-YAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 92 FYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
Y+ I DQ I + G+ L + + + +L + +H H
Sbjct: 121 LYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV----IGTPEFMAPELYDE- 204
I+H DLK N I G +K+ D G+A M+ V +G +M PE +
Sbjct: 176 --IVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 205 -----------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSK 253
+ +D++S G + M + P+ + N +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 291
Query: 254 VKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQV 287
+ + +++ ++ CL QR+S ELL P++Q+
Sbjct: 292 IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 116/285 (40%), Gaps = 39/285 (13%)
Query: 34 IGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNN--IIR 91
IG G V++ +E + A V +++ + L+ +E+ L L+ ++ IIR
Sbjct: 36 IGSGGSSKVFQVLNEKKQI-YAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIR 92
Query: 92 FYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
Y+ I DQ I + G+ L + + + +L + +H H
Sbjct: 93 LYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 147
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV----IGTPEFMAPELYDE- 204
I+H DLK N I G +K+ D G+A M+ V +GT +M PE +
Sbjct: 148 --IVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 205 -----------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP---AA 250
+ +D++S G + M + P+ + N K+ + I P
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIE 260
Query: 251 LSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQVNGTTKNR 294
+ + +++ ++ CL QR+S ELL P++Q+ N+
Sbjct: 261 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 305
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 25/215 (11%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLE-RLYSEVHLLKSLKHNNII 90
E IG+G F V+ + VA R + L P DL+ + E +LK H NI+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR--ETL--PPDLKAKFLQEARILKQYSHPNIV 175
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHD 149
R + Q + + I+ EL G + R +G+ YL S
Sbjct: 176 RLIG--VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 150 PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP--------EFMAPEL 201
IHRDL N + + +KI D G M + A V ++ APE
Sbjct: 234 --CIHRDLAARNCLVT-EKNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAPEA 286
Query: 202 YDEN-YNELADIYSFGMCMLEMVTF-EYPYSECRN 234
+ Y+ +D++SFG+ + E + PY N
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 16/202 (7%)
Query: 33 VIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRF 92
VIGKG F VY C ++ + + +E E L++ L H N++
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 93 YNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 151
+ + +++ G L Q+ R + Q+ G+ YL
Sbjct: 88 IGIMLPPEGLP-HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK-- 144
Query: 152 IIHRDLKCDNIFINGNQGEVKIGDLGLA---------TIMEQANAKSVIGTPEFMAPELY 202
+HRDL N ++ VK+ D GLA ++ + +A+ + + + Y
Sbjct: 145 FVHRDLAARNCMLD-ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 203 DENYNELADIYSFGMCMLEMVT 224
+ +D++SFG+ + E++T
Sbjct: 204 --RFTTKSDVWSFGVLLWELLT 223
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVL--QSPEDLERLYSEVHLLKSLKHN-- 87
+VIGKG+F V KA+D VA VR + Q+ E++ L HL K K N
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRIL---EHLRKQDKDNTM 159
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY----RXXXXXXXXXXXXGWARQILSGLI 143
N+I ++ N I F S+ Y + +A IL L
Sbjct: 160 NVIHMLENFT-----FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQANAKSVIGTPEFMAPE- 200
LH + IIH DLK +NI + QG +K+ D G ++ E + I + + APE
Sbjct: 215 ALHKNR--IIHCDLKPENILLK-QQGRSGIKVIDFG-SSCYEHQRVYTXIQSRFYRAPEV 270
Query: 201 LYDENYNELADIYSFGMCMLEMVTFEYP 228
+ Y D++S G + E++T YP
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLT-GYP 297
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 52/234 (22%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 91
+ +G G+F V + FD +G A + VLQ P R E+ ++K L H NII+
Sbjct: 13 KTLGTGSFGIVCEVFDIESGKRFA-----LKKVLQDPRYKNR---ELDIMKVLDHVNIIK 64
Query: 92 ----FY----------------------NSWIDD----------QNKTVNIITELF---T 112
FY N+ +++ QNK +N+I E
Sbjct: 65 LVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTL 124
Query: 113 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 172
L+ + + Q+ + ++HS I HRD+K N+ +N +K
Sbjct: 125 HKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG--ICHRDIKPQNLLVNSKDNTLK 182
Query: 173 IGDLGLA-TIMEQANAKSVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 223
+ D G A ++ + + I + + APEL Y D++S G E++
Sbjct: 183 LCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVL--QSPEDLERLYSEVHLLKSLKHN-- 87
+VIGKG+F V KA+D VA VR + Q+ E++ L HL K K N
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRIL---EHLRKQDKDNTM 159
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY----RXXXXXXXXXXXXGWARQILSGLI 143
N+I ++ N I F S+ Y + +A IL L
Sbjct: 160 NVIHMLENFT-----FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQANAKSVIGTPEFMAPE- 200
LH + IIH DLK +NI + QG +K+ D G ++ E + I + + APE
Sbjct: 215 ALHKNR--IIHCDLKPENILLK-QQGRSGIKVIDFG-SSCYEHQRVYTXIQSRFYRAPEV 270
Query: 201 LYDENYNELADIYSFGMCMLEMVTFEYP 228
+ Y D++S G + E++T YP
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLT-GYP 297
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 134 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 193
++ Q+ G+ +L S IHRDL NI ++ N VKI D GLA + + G
Sbjct: 204 YSFQVARGMEFLSSRK--CIHRDLAARNILLSENN-VVKICDFGLARDIYKNPDYVRKGD 260
Query: 194 P----EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 247
++MAPE ++D+ Y+ +D++S+G+ + E+ + PY + ++ G++
Sbjct: 261 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR 320
Query: 248 PAALSKVKDPEVKSFIEKC 266
A + PE+ + C
Sbjct: 321 MRA-PEYSTPEIYQIMLDC 338
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 135 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 194
A + G+ +LH+ +P I L ++ I+ E + +A + + + P
Sbjct: 117 ALDMARGMAFLHTLEPLIPRHALNSRSVMID----EDMTARISMADVKFSFQSPGRMYAP 172
Query: 195 EFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 250
++APE ++ AD++SF + + E+VT E P+++ N K G++P
Sbjct: 173 AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI 232
Query: 251 LSKVKDPEVKSFIEKCL 267
+ P V ++ C+
Sbjct: 233 PPGI-SPHVSKLMKICM 248
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 138 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 195
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 226
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 138 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 195
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 226
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 144 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 201
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 202 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 232
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 137 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 195
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 137 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 194
Query: 196 FMAPELY--DENYNELADIYSFGMCMLEMVTF 225
F PEL + Y+ D++S G CML + F
Sbjct: 195 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 225
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 88/208 (42%), Gaps = 24/208 (11%)
Query: 32 EVIGKGAFKTVYKAFDEVNGLEVAWCQVRIDDVL--QSPEDLERLYSEVHLLKSLKHN-- 87
+VIGKG F V KA+D VA VR + Q+ E++ L HL K K N
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRIL---EHLRKQDKDNTM 159
Query: 88 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQY----RXXXXXXXXXXXXGWARQILSGLI 143
N+I ++ N I F S+ Y + +A IL L
Sbjct: 160 NVIHMLENFT-----FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 144 YLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQANAKSVIGTPEFMAPE- 200
LH + IIH DLK +NI + QG +K+ D G ++ E I + + APE
Sbjct: 215 ALHKNR--IIHCDLKPENILLK-QQGRSGIKVIDFG-SSCYEHQRVYXXIQSRFYRAPEV 270
Query: 201 LYDENYNELADIYSFGMCMLEMVTFEYP 228
+ Y D++S G + E++T YP
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLT-GYP 297
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 24/241 (9%)
Query: 33 VIGKGA--FKTVYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII 90
VIGKG TV A + G V ++ ++ S E + L E+H+ K H NI+
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC--SNEMVTFLQGELHVSKLFNHPNIV 73
Query: 91 RFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXX-XXXXXXXGWARQ-ILSGLIYLHSH 148
+ ++I D + ++T GS + + Q +L L Y+H
Sbjct: 74 PYRATFIADNE--LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM 131
Query: 149 DPPIIHRDLKCDNIFINGNQGEVKIGDL--GLATIMEQANAKSVIGTPEF-------MAP 199
+HR +K +I I+ + G+V + L L+ I + V P++ ++P
Sbjct: 132 G--YVHRSVKASHILISVD-GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 188
Query: 200 ELYDEN---YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD 256
E+ +N Y+ +DIYS G+ E+ P+ + + + +K+ +G P L
Sbjct: 189 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL-NGTVPCLLDTSTI 247
Query: 257 P 257
P
Sbjct: 248 P 248
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,179,055
Number of Sequences: 62578
Number of extensions: 780950
Number of successful extensions: 4773
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 854
Number of HSP's that attempted gapping in prelim test: 2855
Number of HSP's gapped (non-prelim): 1177
length of query: 670
length of database: 14,973,337
effective HSP length: 105
effective length of query: 565
effective length of database: 8,402,647
effective search space: 4747495555
effective search space used: 4747495555
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)