Your job contains 1 sequence.
>005918
MQMQALGHIDFGLRSPLLVPAPQPRTSSKRPSISKLNTTTVSSASKWAHRLLADFQFTTA
DNSSLSSSSNTTVTLTPPPPTPTNRHVSIPIDFYQALGAETHFLGDGIRRAYEARISKPP
QYGFSPDALISRRQILQAACETLANASSRREYNQGLADDHADTILTEVPWDKVPGALLVL
QEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLE
RALKLLQEEGASSLAPDLQAQIDETLEEINPRCVLELLGLPLSGEYQARREEGLHGMLNI
LWAVGGGGATAIAGGFTRESFMNEAFLRMTSAEQVKLFSATPNSIPAETFEAYGVALALV
AQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGK
LDECRLWLGLDSDKSPYRNPAIVDFVLENSKEADDNDLPGLCKLLETWLAEVVFPRFRDT
SDIRFKLGDYYDDPTVLRYLERLEGNGSSPLAAAAAIVRIGATEATAVLDHVKSSTIQAL
QKVFPLGQGDKAVKYVEHGETYDPVPVVETEESLTSDQNNFAFTTDAYGTSSSDDIHGEQ
SITDKIKDVSVKIMCAGVAIGLVTLVGLKYLPTRNISSVQQKEIGLAKASDIIDAGKILR
HVLASHPNIP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005918
(670 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2162341 - symbol:ARC6 "AT5G42480" species:3702... 1826 2.3e-188 1
UNIPROTKB|Q55559 - symbol:sll0169 "Sll0169 protein" speci... 238 8.1e-24 2
TAIR|locus:2094143 - symbol:PARC6 "paralog of ARC6" speci... 264 2.9e-19 1
>TAIR|locus:2162341 [details] [associations]
symbol:ARC6 "AT5G42480" species:3702 "Arabidopsis
thaliana" [GO:0006457 "protein folding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009658 "chloroplast
organization" evidence=IMP] [GO:0009706 "chloroplast inner
membrane" evidence=IDA] [GO:0010020 "chloroplast fission"
evidence=IMP] [GO:0031357 "integral to chloroplast inner membrane"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043621 "protein
self-association" evidence=IDA] [GO:0010207 "photosystem II
assembly" evidence=RCA] [GO:0009536 "plastid" evidence=IDA]
InterPro:IPR001623 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043621 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GO:GO:0010020 EMBL:AY221467 EMBL:AY221468 EMBL:AY221469
EMBL:AB016888 EMBL:AY091075 EMBL:AY150490 IPI:IPI00519663
RefSeq:NP_199063.1 UniGene:At.30169 ProteinModelPortal:Q9FIG9
SMR:Q9FIG9 IntAct:Q9FIG9 STRING:Q9FIG9 PaxDb:Q9FIG9 PRIDE:Q9FIG9
EnsemblPlants:AT5G42480.1 GeneID:834255 KEGG:ath:AT5G42480
TAIR:At5g42480 eggNOG:NOG26309 HOGENOM:HOG000030734
InParanoid:Q9FIG9 OMA:EEITPRC PhylomeDB:Q9FIG9
ProtClustDB:CLSN2686596 Genevestigator:Q9FIG9 GO:GO:0031357
InterPro:IPR025344 Pfam:PF13355 Uniprot:Q9FIG9
Length = 801
Score = 1826 (647.8 bits), Expect = 2.3e-188, P = 2.3e-188
Identities = 388/677 (57%), Positives = 469/677 (69%)
Query: 3 MQALGHIDFGLRSPLLVPAPQPRTSSKRPSISKLNTTTVSSASKWAHRLLADFQFTTADX 62
M+AL H+ GL SP + P T+ R S + +TT+ SASKWA RLL+DF FT+
Sbjct: 1 MEALSHVGIGL-SPFQLCRLPPATTKLRRSHN--TSTTICSASKWADRLLSDFNFTSDSS 57
Query: 63 XXXXXXXXXXXXXXXX--XXXXXXRHVSIPIDFYQALGAETHFLGDGIRRAYEARISKPP 120
RHV IPIDFYQ LGA+THFL DGIRRA+EAR+SKPP
Sbjct: 58 SSSFATATTTATLVSPPPSIDRPERHVPIPIDFYQVLGAQTHFLTDGIRRAFEARVSKPP 117
Query: 121 QYGFSPDALISRRQILQAACETLANASSRREYNQGLADDHADTILTEVPWDKVPGALLVL 180
Q+GFS DALISRRQILQAACETL+N SRREYN+GL DD T++T+VPWDKVPGAL VL
Sbjct: 118 QFGFSDDALISRRQILQAACETLSNPRSRREYNEGLLDDEEATVITDVPWDKVPGALCVL 177
Query: 181 QEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLE 240
QE GETE+VLR+GE+LL+ERLPKSFKQDVVL MALA++D+SRDAMA +PPD+I G E +E
Sbjct: 178 QEGGETEIVLRVGEALLKERLPKSFKQDVVLVMALAFLDVSRDAMALDPPDFITGYEFVE 237
Query: 241 RALKLLQEEGASSLAPDLQAQIDETLEEINPRCVLELLGLPLSGEYQARREEGLHGMLNI 300
ALKLLQEEGASSLAPDL+AQIDETLEEI PR VLELLGLPL +Y A+R GL G+ NI
Sbjct: 238 EALKLLQEEGASSLAPDLRAQIDETLEEITPRYVLELLGLPLGDDYAAKRLNGLSGVRNI 297
Query: 301 LWXXXXXXXXXXXXXFTRESFMNEAFLRMTSAEQVKLFSATPNSIPAETFEAYGVALALV 360
LW TRE FMNEAFLRMT+AEQV LF ATP++IPAE+FE Y VALALV
Sbjct: 298 LWSVGGGGASALVGGLTREKFMNEAFLRMTAAEQVDLFVATPSNIPAESFEVYEVALALV 357
Query: 361 AQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGK 420
AQAF+GK+PHL+ DAD F+ LQQ KV + +Y E++F LERGLC+LL+GK
Sbjct: 358 AQAFIGKKPHLLQDADKQFQQLQQAKVMAMEIPAMLYDTRNNWEIDFGLERGLCALLIGK 417
Query: 421 LDECRLWLGLDSDKSPYRNPAIVDFVLENSKEADDNDLPGLCKLLETWLAEVVFPRFRDT 480
+DECR+WLGLDS+ S YRNPAIV+FVLENS D++DLPGLCKLLETWLA VVFPRFRDT
Sbjct: 418 VDECRMWLGLDSEDSQYRNPAIVEFVLENSNRDDNDDLPGLCKLLETWLAGVVFPRFRDT 477
Query: 481 SDIRFKLGDYYDDPTVLRYLERLEGNGSSPLXXXXXIVRIGATEATAVLDHVKSSTIQAL 540
D +FKLGDYYDDP VL YLER+E SPL + RIGA +HVK+S +QAL
Sbjct: 478 KDKKFKLGDYYDDPMVLSYLERVEVVQGSPLAAAAAMARIGA-------EHVKASAMQAL 530
Query: 541 QKVFPLGQGDK-AVKYVEHGETY---DPV---------PVVETEESLTSDQNNFAFTTDA 587
QKVFP D+ + + + ET DPV P V E++ +N F T+
Sbjct: 531 QKVFPSRYTDRNSAEPKDVQETVFSVDPVGNNVGRDGEPGVFIAEAVRPSEN---FETND 587
Query: 588 Y----GTSSS--DDIHGEQSITDKIKDVSVKIMCAGVAIGLVTLVGLKYLPTRNISSVQQ 641
Y G S S D+ E S+ D +K+ SVKI+ AGVAIGL++L KY ++ SS Q+
Sbjct: 588 YAIRAGVSESSVDETTVEMSVADMLKEASVKILAAGVAIGLISLFSQKYF-LKSSSSFQR 646
Query: 642 KEIGLAKASDIIDAGKI 658
K++ + SD+ G +
Sbjct: 647 KDMVSSMESDVATIGSV 663
>UNIPROTKB|Q55559 [details] [associations]
symbol:sll0169 "Sll0169 protein" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0000917 "barrier
septum assembly" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030428 "cell septum" evidence=IDA]
InterPro:IPR001623 Pfam:PF00226 GO:GO:0000917 EMBL:BA000022
GenomeReviews:BA000022_GR Gene3D:1.10.287.110 SMART:SM00271
SUPFAM:SSF46565 PROSITE:PS50076 eggNOG:NOG26309 InterPro:IPR025344
Pfam:PF13355 HSSP:P08622 PIR:S76082 RefSeq:NP_441990.1
RefSeq:YP_005652050.1 ProteinModelPortal:Q55559 IntAct:Q55559
STRING:Q55559 GeneID:12253262 GeneID:952773 KEGG:syn:sll0169
KEGG:syy:SYNGTS_2097 PATRIC:23841546 HOGENOM:HOG000035602
OMA:QEHTIAN ProtClustDB:CLSK919665 Uniprot:Q55559
Length = 714
Score = 238 (88.8 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 88/311 (28%), Positives = 149/311 (47%)
Query: 89 IPIDFYQALGAETHFLGDGIRRAYEARISKPPQYGFSPDALISRRQILQAACETLANASS 148
IP+DFY+ LG G+ I +AY+ R+ + P+ FS A+ R Q+L A ETL +
Sbjct: 3 IPLDFYRILGIPPQSGGETIEQAYQDRLLQLPRREFSDAAVTLRNQLLAIAYETLRDPEK 62
Query: 149 RREYNQ---GLADDH-ADTI-LTEVPWDKVP----GALLVLQEAGETEVVLRIGESLLRE 199
R+ Y+Q G D+ + + LT + P GALL+L + GE E+V++ GE +L +
Sbjct: 63 RQAYDQEWWGAMDEALGEALPLTTPELECSPEQEIGALLILLDLGEYELVVKYGEPVLHD 122
Query: 200 RLPKS--FKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPD 257
P + QD +L++ LA+ ++SR+ ++ + +AL LQ++ P
Sbjct: 123 PNPPAGGLPQDYLLSVILAHWELSRERWQQQQYEFAATASL--KALARLQQDNDF---PA 177
Query: 258 LQAQIDETLEEINPRCVLELLGLPLSGEYQARREEGLHGMLNILWXXXXXXXXXXX--XX 315
L+A+I + L + P +LELL GE Q R++GL +L +
Sbjct: 178 LEAEIRQELYRLRPYRILELLAKEGQGEEQ--RQQGL-ALLQAMVQDRGGIEGKGEDYSG 234
Query: 316 FTRESFM---NEAFLRMTSAEQVKLFSATPNSIPAETFEAYGVALALVAQAFVGKQPHLI 372
+ F+ ++ +T AEQ LF P S +Y +L+A+ + P I
Sbjct: 235 LGNDDFLKFIHQLRCHLTVAEQNALF--LPESQRPSLVASYLAVHSLMAEGVKEQDPMAI 292
Query: 373 ADADNMFKHLQ 383
+A ++ L+
Sbjct: 293 VEAKSLIIQLE 303
Score = 117 (46.2 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 35/110 (31%), Positives = 56/110 (50%)
Query: 395 SIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLGLDSDKSPYRNPAIVDFVLENSKEAD 454
S+ I LE + + ALE+ +C LL+G+ + + +D +P IV LE+
Sbjct: 297 SLIIQLENCQ-DLALEKVICELLLGQTEV--VLAAIDQG-----DPKIVAG-LESKLATG 347
Query: 455 DNDLPGLCKLLETWLAEVVFPRFRDTSDIRFKLGDYYDDPTVLRYLERLE 504
++ L E WL E + P FRD S Y+++P+V +YLE+LE
Sbjct: 348 EDPLTAFYTFTEQWLEEEIVPYFRDLSPETLSPKAYFNNPSVQQYLEQLE 397
>TAIR|locus:2094143 [details] [associations]
symbol:PARC6 "paralog of ARC6" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0043572
"plastid fission" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009528 "plastid inner membrane" evidence=IDA]
[GO:0010020 "chloroplast fission" evidence=IMP] [GO:0043621
"protein self-association" evidence=IPI] GO:GO:0016021
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP000419
GO:GO:0009706 GO:GO:0010020 InterPro:IPR025344 Pfam:PF13355
EMBL:AY074283 IPI:IPI00536404 IPI:IPI00656912 RefSeq:NP_001030725.1
RefSeq:NP_188549.2 UniGene:At.42679 ProteinModelPortal:Q8VY16
SMR:Q8VY16 IntAct:Q8VY16 STRING:Q8VY16 PaxDb:Q8VY16 PRIDE:Q8VY16
EnsemblPlants:AT3G19180.1 GeneID:821452 KEGG:ath:AT3G19180
TAIR:At3g19180 eggNOG:NOG269839 HOGENOM:HOG000006302
InParanoid:Q8VY16 OMA:DFNCFYM PhylomeDB:Q8VY16
ProtClustDB:CLSN2690554 Genevestigator:Q8VY16 GO:GO:0009528
Uniprot:Q8VY16
Length = 819
Score = 264 (98.0 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 104/409 (25%), Positives = 171/409 (41%)
Query: 87 VSIPIDFYQALGAETHFLGDGIRRAYEARISKPPQYGFSPDALISRRQILQAACETLANA 146
+ +P+ YQ +G D + ++ + G++ +A +R+ +L + L
Sbjct: 93 IELPVTCYQLIGVSEQAEKDEVVKSVINLKKTDAEEGYTMEAAAARQDLLMDVRDKLLFE 152
Query: 147 SSRREYNQGLADDHADTILTEVPWDKVPGALLVLQEAGETEVVLRIGESLLRERLPKSFK 206
S EY L + A +PW +PGAL +LQE G+ ++VL IG + LR K +
Sbjct: 153 S---EYAGNLKEKIAPKSPLRIPWAWLPGALCLLQEVGQEKLVLDIGRAALRNLDSKPYI 209
Query: 207 QDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGA-SSLAPDLQAQIDET 265
D+ L+MALA I++ A N G E L RA L+ + LA L QI+E+
Sbjct: 210 HDIFLSMALAECAIAKAAFEVNKVSQ--GFEALARAQSFLKSKVTLGKLA--LLTQIEES 265
Query: 266 LEEINPRCVLELLGLPLSGEYQARREEGLHGMLNILWXXXXXXXXXXXXXFTRESFMNEA 325
LEE+ P C L+LLGLP + E RR + + +L + F+++A
Sbjct: 266 LEELAPPCTLDLLGLPRTPENAERRRGAIAALRELLRQGLSVEASCQIQDWP--CFLSQA 323
Query: 326 FLRMTSAEQVKLFSATPNSIPAE---TFEAYGVALALVAQAFVGKQPHLIADADNMFKHL 382
R+ + E V L +I + + E++ + + F L+ F
Sbjct: 324 ISRLLATEIVDLLPWDDLAITRKNKKSLESHNQRVVIDFNCFYMV---LLGHIAVGFSGK 380
Query: 383 QQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLGLDSDKSPYRNPAI 442
Q + + + I E +++F E CS L+ + E L+ K N
Sbjct: 381 QNETINKAKTICECLIASEGVDLKF--EEAFCSFLLKQGSEAE---ALEKLKQLESNS-- 433
Query: 443 VDFVLENSKEADDNDLPGLCKLLETWLAEVVFPRFRDTSDIRFKLGDYY 491
D + NS ++ LE WL E V F DT L +++
Sbjct: 434 -DSAVRNSILGKESRSTSATPSLEAWLMESVLANFPDTRGCSPSLANFF 481
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 670 629 0.00091 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 617 (66 KB)
Total size of DFA: 316 KB (2162 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 51.82u 0.10s 51.92t Elapsed: 00:00:03
Total cpu time: 51.82u 0.10s 51.92t Elapsed: 00:00:03
Start: Fri May 10 19:37:51 2013 End: Fri May 10 19:37:54 2013