Query 005918
Match_columns 670
No_of_seqs 271 out of 1094
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 11:00:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005918.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005918hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dn9_A DNAJ homolog subfamily 99.6 1.9E-16 6.5E-21 132.7 5.4 69 90-158 6-75 (79)
2 1wjz_A 1700030A21RIK protein; 99.6 7.1E-16 2.4E-20 133.0 8.8 69 90-158 15-90 (94)
3 2och_A Hypothetical protein DN 99.6 3.4E-16 1.2E-20 129.8 5.9 68 86-156 3-71 (73)
4 1hdj_A Human HSP40, HDJ-1; mol 99.6 4.9E-16 1.7E-20 129.8 6.9 69 90-159 2-71 (77)
5 2yua_A Williams-beuren syndrom 99.6 3E-16 1E-20 137.6 5.6 68 91-158 17-85 (99)
6 2ej7_A HCG3 gene; HCG3 protein 99.6 7.7E-16 2.6E-20 129.9 7.9 68 91-158 9-78 (82)
7 2ctp_A DNAJ homolog subfamily 99.6 1E-15 3.5E-20 128.2 7.8 69 90-159 6-75 (78)
8 2cug_A Mkiaa0962 protein; DNAJ 99.6 1E-15 3.5E-20 131.4 7.4 70 88-158 14-84 (88)
9 2ctq_A DNAJ homolog subfamily 99.6 5.6E-16 1.9E-20 138.8 5.5 70 90-159 19-89 (112)
10 1bq0_A DNAJ, HSP40; chaperone, 99.6 6.4E-16 2.2E-20 136.2 4.8 70 90-159 2-72 (103)
11 2ctr_A DNAJ homolog subfamily 99.6 1.6E-15 5.6E-20 130.2 6.1 68 90-158 6-74 (88)
12 2ctw_A DNAJ homolog subfamily 99.6 3.2E-15 1.1E-19 133.5 6.8 68 90-157 16-84 (109)
13 2dmx_A DNAJ homolog subfamily 99.6 2.1E-15 7.2E-20 130.1 5.4 68 91-158 9-78 (92)
14 2lgw_A DNAJ homolog subfamily 99.6 2.2E-15 7.4E-20 132.9 5.5 69 91-159 2-72 (99)
15 2o37_A Protein SIS1; HSP40, J- 99.5 2.5E-15 8.6E-20 130.1 5.3 70 86-158 3-73 (92)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.5 5E-15 1.7E-19 131.6 5.3 72 87-158 11-87 (109)
17 3hho_A CO-chaperone protein HS 99.5 9.7E-14 3.3E-18 133.5 13.6 68 90-157 3-78 (174)
18 3apq_A DNAJ homolog subfamily 99.5 1.1E-14 3.8E-19 139.1 4.6 69 91-159 2-71 (210)
19 2l6l_A DNAJ homolog subfamily 99.5 1.9E-14 6.6E-19 134.9 4.2 68 91-158 10-84 (155)
20 1fpo_A HSC20, chaperone protei 99.4 7.3E-13 2.5E-17 127.2 13.0 66 92-157 2-75 (171)
21 2ys8_A RAB-related GTP-binding 99.4 7.9E-14 2.7E-18 120.6 2.7 63 88-151 24-87 (90)
22 3lz8_A Putative chaperone DNAJ 99.4 7.2E-14 2.5E-18 146.4 0.0 66 91-157 28-94 (329)
23 1gh6_A Large T antigen; tumor 99.3 6.7E-14 2.3E-18 126.8 -0.8 61 91-155 8-71 (114)
24 3bvo_A CO-chaperone protein HS 99.3 1.8E-12 6.2E-17 128.1 8.2 67 91-157 43-117 (207)
25 2pf4_E Small T antigen; PP2A, 99.3 2E-13 6.9E-18 132.2 -0.1 63 91-157 11-76 (174)
26 1faf_A Large T antigen; J doma 99.3 6.4E-13 2.2E-17 112.7 2.0 59 91-153 11-72 (79)
27 1n4c_A Auxilin; four helix bun 99.3 6E-13 2.1E-17 129.7 0.7 62 91-152 117-182 (182)
28 3uo3_A J-type CO-chaperone JAC 99.2 1.9E-12 6.4E-17 125.6 3.4 65 90-157 10-82 (181)
29 1iur_A KIAA0730 protein; DNAJ 99.2 1E-12 3.5E-17 114.1 1.2 59 91-149 16-76 (88)
30 3apo_A DNAJ homolog subfamily 99.2 1.2E-12 4E-17 147.5 0.4 71 89-159 19-90 (780)
31 2guz_A Mitochondrial import in 99.2 3.6E-12 1.2E-16 105.8 1.7 55 91-149 14-70 (71)
32 2qwo_B Putative tyrosine-prote 99.2 3.1E-12 1.1E-16 112.4 1.0 55 91-145 33-91 (92)
33 3ag7_A Putative uncharacterize 99.2 4.2E-12 1.4E-16 113.7 1.3 56 91-147 41-104 (106)
34 2y4t_A DNAJ homolog subfamily 98.7 1.2E-08 3.9E-13 102.6 4.9 65 91-155 382-450 (450)
35 2guz_B Mitochondrial import in 98.1 2E-06 6.7E-11 71.2 3.6 49 92-144 5-57 (65)
36 2pzi_A Probable serine/threoni 90.3 0.13 4.3E-06 57.4 3.0 48 88-142 626-675 (681)
37 3ma5_A Tetratricopeptide repea 75.6 26 0.00088 28.3 10.1 77 179-271 16-92 (100)
38 3gw4_A Uncharacterized protein 74.1 18 0.00061 31.5 9.4 84 179-272 116-199 (203)
39 2yhc_A BAMD, UPF0169 lipoprote 63.0 92 0.0031 28.5 20.5 196 179-429 13-208 (225)
40 3qww_A SET and MYND domain-con 54.7 61 0.0021 34.7 10.6 81 179-268 349-432 (433)
41 3qwp_A SET and MYND domain-con 54.3 55 0.0019 34.8 10.1 64 179-249 338-404 (429)
42 2kat_A Uncharacterized protein 54.0 84 0.0029 25.2 10.3 77 179-271 28-104 (115)
43 2xcb_A PCRH, regulatory protei 53.7 54 0.0019 27.7 8.3 77 179-270 61-137 (142)
44 2vgx_A Chaperone SYCD; alterna 47.4 86 0.0029 27.2 8.8 77 179-270 64-140 (148)
45 3ro3_A PINS homolog, G-protein 46.5 42 0.0015 27.1 6.2 66 179-250 98-163 (164)
46 3upv_A Heat shock protein STI1 44.3 1.3E+02 0.0043 24.4 9.4 79 179-269 47-125 (126)
47 3ma5_A Tetratricopeptide repea 44.1 28 0.00096 28.1 4.7 44 371-429 22-65 (100)
48 2v5f_A Prolyl 4-hydroxylase su 43.1 72 0.0025 26.3 7.2 34 214-249 5-38 (104)
49 3ro3_A PINS homolog, G-protein 43.0 1.3E+02 0.0044 24.2 9.4 64 179-250 58-123 (164)
50 3n71_A Histone lysine methyltr 39.0 1.3E+02 0.0043 32.7 10.2 64 179-249 360-426 (490)
51 3mkr_A Coatomer subunit epsilo 37.6 2.3E+02 0.0078 27.5 10.9 45 370-429 180-224 (291)
52 3k9i_A BH0479 protein; putativ 35.5 46 0.0016 27.2 4.8 44 371-429 42-85 (117)
53 2xev_A YBGF; tetratricopeptide 35.4 1.4E+02 0.0047 23.8 7.6 58 179-245 48-105 (129)
54 3k9i_A BH0479 protein; putativ 34.5 1.3E+02 0.0045 24.4 7.4 55 179-245 36-90 (117)
55 2xcb_A PCRH, regulatory protei 34.4 48 0.0016 28.1 4.9 44 371-429 67-110 (142)
56 2kat_A Uncharacterized protein 33.9 96 0.0033 24.9 6.4 56 352-429 22-77 (115)
57 2l6j_A TPR repeat-containing p 33.5 73 0.0025 24.7 5.5 44 371-429 19-62 (111)
58 2xev_A YBGF; tetratricopeptide 32.4 1.7E+02 0.0057 23.3 7.6 58 179-245 11-68 (129)
59 2lni_A Stress-induced-phosphop 31.9 1E+02 0.0035 24.4 6.2 45 370-429 64-108 (133)
60 4gcn_A Protein STI-1; structur 31.4 1.9E+02 0.0064 24.2 8.1 60 179-245 51-112 (127)
61 1pc2_A Mitochondria fission pr 30.6 1E+02 0.0036 28.9 6.8 64 349-429 32-95 (152)
62 3ro2_A PINS homolog, G-protein 30.6 3.1E+02 0.011 24.9 12.1 64 179-250 14-77 (338)
63 3sf4_A G-protein-signaling mod 30.4 2.2E+02 0.0077 27.1 9.4 19 232-250 323-341 (406)
64 2kc7_A BFR218_protein; tetratr 29.0 74 0.0025 24.6 4.8 43 372-429 16-59 (99)
65 2vgx_A Chaperone SYCD; alterna 28.1 68 0.0023 27.9 4.9 43 372-429 71-113 (148)
66 3gw4_A Uncharacterized protein 27.5 2.9E+02 0.0099 23.6 18.1 57 182-250 4-60 (203)
67 3sz7_A HSC70 cochaperone (SGT) 27.3 74 0.0025 27.3 4.9 44 371-429 26-69 (164)
68 2yhc_A BAMD, UPF0169 lipoprote 27.2 3.5E+02 0.012 24.5 10.1 131 106-245 21-176 (225)
69 1na3_A Designed protein CTPR2; 27.0 93 0.0032 23.2 4.9 44 371-429 24-67 (91)
70 4a1s_A PINS, partner of inscut 26.8 4.4E+02 0.015 25.5 16.4 64 179-250 57-120 (411)
71 3gyz_A Chaperone protein IPGC; 26.4 63 0.0022 28.9 4.4 44 371-429 85-128 (151)
72 3upv_A Heat shock protein STI1 25.7 89 0.003 25.3 4.9 56 352-429 41-96 (126)
73 3gyz_A Chaperone protein IPGC; 25.5 67 0.0023 28.7 4.4 57 351-429 38-94 (151)
74 3sz7_A HSC70 cochaperone (SGT) 24.2 91 0.0031 26.7 4.9 56 352-429 48-103 (164)
75 2lni_A Stress-induced-phosphop 24.0 74 0.0025 25.2 4.0 43 372-429 32-74 (133)
76 1na0_A Designed protein CTPR3; 23.7 1.2E+02 0.004 23.4 5.1 44 371-429 24-67 (125)
77 2dba_A Smooth muscle cell asso 23.6 1.1E+02 0.0036 24.8 4.9 44 371-429 80-123 (148)
78 1hxi_A PEX5, peroxisome target 23.4 1.6E+02 0.0056 24.4 6.2 56 352-429 20-75 (121)
79 1elr_A TPR2A-domain of HOP; HO 22.6 1.2E+02 0.0041 23.6 5.0 44 371-429 19-62 (131)
80 4a1s_A PINS, partner of inscut 22.4 5.3E+02 0.018 24.9 15.4 57 186-250 199-257 (411)
81 1elw_A TPR1-domain of HOP; HOP 22.3 1.2E+02 0.0041 23.2 4.8 44 371-429 19-62 (118)
82 1hz4_A MALT regulatory protein 22.2 2E+02 0.0067 27.9 7.4 67 179-251 262-328 (373)
83 2dba_A Smooth muscle cell asso 21.6 1.7E+02 0.0059 23.5 5.9 47 371-429 43-89 (148)
84 2kck_A TPR repeat; tetratricop 21.3 1.1E+02 0.0037 23.2 4.4 46 371-429 55-101 (112)
85 1nzn_A CGI-135 protein, fissio 21.0 1.4E+02 0.0046 27.4 5.5 63 349-428 35-97 (126)
86 4gco_A Protein STI-1; structur 20.8 3.1E+02 0.011 22.9 7.6 56 178-245 55-110 (126)
87 3iqc_A FLIS, flagellar protein 20.8 1.8E+02 0.0062 26.5 6.3 67 213-282 35-101 (131)
88 1hxi_A PEX5, peroxisome target 20.8 3.2E+02 0.011 22.6 7.5 56 178-245 25-80 (121)
89 3q49_B STIP1 homology and U bo 20.5 1.3E+02 0.0044 24.3 4.9 43 372-429 59-101 (137)
90 2qfc_A PLCR protein; TPR, HTH, 20.3 2.2E+02 0.0076 27.0 7.2 76 179-266 205-283 (293)
91 1qqe_A Vesicular transport pro 20.1 3.2E+02 0.011 26.1 8.3 66 178-251 45-112 (292)
92 2hr2_A Hypothetical protein; a 20.1 4.5E+02 0.016 24.5 9.1 85 178-269 65-156 (159)
93 2vyi_A SGTA protein; chaperone 20.0 1.4E+02 0.0049 23.1 4.9 44 371-429 27-70 (131)
No 1
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=1.9e-16 Score=132.71 Aligned_cols=69 Identities=23% Similarity=0.298 Sum_probs=62.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcccC
Q 005918 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (670)
Q Consensus 90 PlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e 158 (670)
..|||+||||+++++.++||+|||+++++ |||++.+.+.+.++|+.|++||++|+||.+|+.||..+..
T Consensus 6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 46999999999999999999999999876 7999876556778999999999999999999999998654
No 2
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.62 E-value=7.1e-16 Score=132.95 Aligned_cols=69 Identities=17% Similarity=0.296 Sum_probs=61.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCC------hHHHHHHHHHHHHHHHhcCCchhhHHHhhcccC
Q 005918 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFS------PDALISRRQILQAACETLANASSRREYNQGLAD 158 (670)
Q Consensus 90 PlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s------~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e 158 (670)
..|||+||||+++|+.+|||+|||+++++ |||++.. .+...++|+.|++||+||+||.+|+.||..+..
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 36999999999999999999999999987 7999653 145678999999999999999999999998864
No 3
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.62 E-value=3.4e-16 Score=129.75 Aligned_cols=68 Identities=21% Similarity=0.342 Sum_probs=59.4
Q ss_pred CCCcCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcc
Q 005918 86 HVSIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGL 156 (670)
Q Consensus 86 ~m~iPlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L 156 (670)
.|....|||+||||+++++.++||+|||+++++ |||++.+. ..+|+.|++||++|+||.+|+.||...
T Consensus 3 ~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g 71 (73)
T 2och_A 3 AMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGG 71 (73)
T ss_dssp ---CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 467778999999999999999999999999876 79997653 368999999999999999999999875
No 4
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.62 E-value=4.9e-16 Score=129.81 Aligned_cols=69 Identities=20% Similarity=0.344 Sum_probs=61.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcccCC
Q 005918 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (670)
Q Consensus 90 PlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e~ 159 (670)
..|||+||||+++|+.++||+|||+++++ |||++.++ ...++|+.|++||++|+||.+|+.||....++
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP-GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT-THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence 46999999999999999999999999987 79998654 35678999999999999999999999986543
No 5
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=3e-16 Score=137.61 Aligned_cols=68 Identities=24% Similarity=0.323 Sum_probs=62.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcccC
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e 158 (670)
.|||+||||+++|+.++||+|||+++++ |||++...+.+.++|+.|++||+||+||.+|+.||..+..
T Consensus 17 ~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 17 TALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 6999999999999999999999999876 7999876666788999999999999999999999998754
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=7.7e-16 Score=129.85 Aligned_cols=68 Identities=22% Similarity=0.335 Sum_probs=61.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHhcCCchhhHHHhhcccC
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLAD 158 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~-eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e 158 (670)
.|||+||||+++++.++||+|||+++++ |||++.+. +.+.++|+.|++||++|+||.+|+.||.....
T Consensus 9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 78 (82)
T 2ej7_A 9 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSG 78 (82)
T ss_dssp CCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 5999999999999999999999999987 79998654 46678999999999999999999999987643
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=1e-15 Score=128.19 Aligned_cols=69 Identities=22% Similarity=0.364 Sum_probs=61.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcccCC
Q 005918 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (670)
Q Consensus 90 PlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e~ 159 (670)
..|||+||||+++|+.++||+|||+++++ |||++..+ ...++|+.|++||++|+||.+|+.||..+..+
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP-GATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH-HHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 46999999999999999999999999987 79998654 45678999999999999999999999987543
No 8
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.60 E-value=1e-15 Score=131.40 Aligned_cols=70 Identities=23% Similarity=0.330 Sum_probs=62.0
Q ss_pred CcCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcccC
Q 005918 88 SIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (670)
Q Consensus 88 ~iPlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e 158 (670)
....|||+||||+++|+.++||+|||+++++ |||++.++ ...++|+.|++||++|+||.+|+.||.....
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP-GAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST-THHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh-hHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 3457999999999999999999999999886 79998654 4567899999999999999999999988653
No 9
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=5.6e-16 Score=138.82 Aligned_cols=70 Identities=24% Similarity=0.274 Sum_probs=63.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcccCC
Q 005918 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (670)
Q Consensus 90 PlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e~ 159 (670)
..|||+||||+++|+.++||+|||+++++ |||++.+.+.+.++|+.|++||+||+||.+|+.||..+..+
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 47999999999999999999999999987 79998755567789999999999999999999999987653
No 10
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.58 E-value=6.4e-16 Score=136.22 Aligned_cols=70 Identities=23% Similarity=0.310 Sum_probs=63.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcccCC
Q 005918 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (670)
Q Consensus 90 PlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e~ 159 (670)
..|||+||||+++|+.++||+|||+++++ |||++.+.+.++++|+.|++||++|+||.+|+.||....+.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 72 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 72 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhh
Confidence 36999999999999999999999999987 79998765566789999999999999999999999987654
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.6e-15 Score=130.17 Aligned_cols=68 Identities=25% Similarity=0.340 Sum_probs=60.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcccC
Q 005918 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (670)
Q Consensus 90 PlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e 158 (670)
..|||+||||+++|+.+|||+|||+++++ |||++.++ ...++|+.|++||++|+||.+|+.||..+..
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 74 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSP-DAEAKFREIAEAYETLSDANRRKEYDTLGHS 74 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSH-HHHHHHHHHHHHHHHHHSSHHHHHHHHTCHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh-HHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence 36999999999999999999999999886 79998754 5678999999999999999999999987643
No 12
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.56 E-value=3.2e-15 Score=133.51 Aligned_cols=68 Identities=19% Similarity=0.282 Sum_probs=61.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhccc
Q 005918 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (670)
Q Consensus 90 PlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~ 157 (670)
..|||+||||+++|+.++||+|||+++++ |||++...+.+.++|+.|++||+||+||.+|+.||....
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~ 84 (109)
T 2ctw_A 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGS 84 (109)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence 46999999999999999999999999886 799987666678899999999999999999999998753
No 13
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2.1e-15 Score=130.08 Aligned_cols=68 Identities=19% Similarity=0.382 Sum_probs=61.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHhcCCchhhHHHhhcccC
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLAD 158 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~-eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e 158 (670)
.|||+||||+++++.++||+|||+++++ |||++... +.++++|+.|++||++|+||.+|+.||....+
T Consensus 9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 78 (92)
T 2dmx_A 9 ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCD 78 (92)
T ss_dssp CCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSC
T ss_pred cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence 5999999999999999999999999876 79997653 46778999999999999999999999998654
No 14
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.56 E-value=2.2e-15 Score=132.89 Aligned_cols=69 Identities=17% Similarity=0.274 Sum_probs=61.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHhcCCchhhHHHhhcccCC
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLADD 159 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~-eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e~ 159 (670)
.|||+||||+++|+.+|||+|||+++++ |||++.+. +.+.++|+.|++||++|+||.+|+.||....++
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~ 72 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREG 72 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 4899999999999999999999999887 79998653 456789999999999999999999999987654
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.55 E-value=2.5e-15 Score=130.12 Aligned_cols=70 Identities=17% Similarity=0.238 Sum_probs=61.1
Q ss_pred CCCcCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcccC
Q 005918 86 HVSIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (670)
Q Consensus 86 ~m~iPlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e 158 (670)
.|....|||+||||+++++.++||+|||+++++ |||++.... ++|+.|++||++|+||.+|+.||....+
T Consensus 3 ~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~---~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 73 (92)
T 2o37_A 3 AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDT---EKFKEISEAFEILNDPQKREIYDQYGLE 73 (92)
T ss_dssp -CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCH---HHHHHHHHHHHHHTSHHHHHHHHHHCHH
T ss_pred ccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChH---HHHHHHHHHHHHHCCHHHHHHHHHHCHH
Confidence 355678999999999999999999999999887 799975542 4899999999999999999999987543
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.53 E-value=5e-15 Score=131.56 Aligned_cols=72 Identities=19% Similarity=0.183 Sum_probs=63.7
Q ss_pred CCcCCCcccccCCCCCC-CHHHHHHHHHHHHhC-CCCCCCC---hHHHHHHHHHHHHHHHhcCCchhhHHHhhcccC
Q 005918 87 VSIPIDFYQALGAETHF-LGDGIRRAYEARISK-PPQYGFS---PDALISRRQILQAACETLANASSRREYNQGLAD 158 (670)
Q Consensus 87 m~iPlDYYeILGVs~~A-S~eEIKkAYRklal~-~PDk~~s---~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e 158 (670)
+....|||+||||+++| +.++||+|||+++++ |||++.+ .+.+.++|+.|++||++|+||.+|+.||..+..
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 34457999999999999 999999999999886 7999865 345678999999999999999999999998754
No 17
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.51 E-value=9.7e-14 Score=133.48 Aligned_cols=68 Identities=18% Similarity=0.339 Sum_probs=60.0
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHhC-CCCCCCChHH-----HHHHHHHHHHHHHhcCCchhhHHHhhccc
Q 005918 90 PIDFYQALGAETHFL--GDGIRRAYEARISK-PPQYGFSPDA-----LISRRQILQAACETLANASSRREYNQGLA 157 (670)
Q Consensus 90 PlDYYeILGVs~~AS--~eEIKkAYRklal~-~PDk~~s~ea-----a~~RfqlI~eAYeVLSDp~kR~~YD~~L~ 157 (670)
+.|||+||||+++++ .++||+|||+++++ |||++.+... +..+|+.|++||+||+||.+|+.||..+.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 569999999999998 99999999999987 8998754332 56789999999999999999999999885
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.49 E-value=1.1e-14 Score=139.13 Aligned_cols=69 Identities=20% Similarity=0.252 Sum_probs=62.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcccCC
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e~ 159 (670)
.|||+||||+++|+.++||+|||+++++ |||++...+.+.++|+.|++||++|+||.+|+.||....++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 71 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 71 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccc
Confidence 4899999999999999999999999987 89998655567789999999999999999999999987543
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.46 E-value=1.9e-14 Score=134.88 Aligned_cols=68 Identities=21% Similarity=0.346 Sum_probs=60.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh------HHHHHHHHHHHHHHHhcCCchhhHHHhhcccC
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP------DALISRRQILQAACETLANASSRREYNQGLAD 158 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~------eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e 158 (670)
.|||+||||+++|+.++||+|||+++++ |||++.+. +.+.++|+.|++||+||+||.+|+.||..+..
T Consensus 10 ~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 10 KDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp SHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 5999999999999999999999999987 79997543 13567899999999999999999999987653
No 20
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.43 E-value=7.3e-13 Score=127.18 Aligned_cols=66 Identities=18% Similarity=0.281 Sum_probs=58.8
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHhC-CCCCCCChH-----HHHHHHHHHHHHHHhcCCchhhHHHhhccc
Q 005918 92 DFYQALGAETHF--LGDGIRRAYEARISK-PPQYGFSPD-----ALISRRQILQAACETLANASSRREYNQGLA 157 (670)
Q Consensus 92 DYYeILGVs~~A--S~eEIKkAYRklal~-~PDk~~s~e-----aa~~RfqlI~eAYeVLSDp~kR~~YD~~L~ 157 (670)
|||+||||++++ +.++||++||+++++ |||++.+.. .+..+|+.|++||+||+||.+|+.||..+.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 899999999999 999999999999886 799876432 245789999999999999999999999876
No 21
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=7.9e-14 Score=120.58 Aligned_cols=63 Identities=16% Similarity=0.143 Sum_probs=55.4
Q ss_pred CcCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHH
Q 005918 88 SIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRRE 151 (670)
Q Consensus 88 ~iPlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~ 151 (670)
....|||+||||+++|+.+|||+|||+++++ |||++... ...++|+.|++||++|+||.+|+.
T Consensus 24 ~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 24 RNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP-GSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT-THHHHHHHHHHHHHHHHHHHCCSC
T ss_pred hcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCcccccC
Confidence 3357999999999999999999999999987 89998654 356789999999999999998864
No 22
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.35 E-value=7.2e-14 Score=146.42 Aligned_cols=66 Identities=26% Similarity=0.285 Sum_probs=0.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhccc
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~ 157 (670)
.|||+||||+++|+.+|||+|||+++++ |||++.++ .++++|+.|++||++|+||++|+.||++..
T Consensus 28 ~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 94 (329)
T 3lz8_A 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN-DAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ 94 (329)
T ss_dssp --------------------------------------------------------------------
T ss_pred cCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh-HHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence 6999999999999999999999999987 69987654 567899999999999999999999998754
No 23
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.34 E-value=6.7e-14 Score=126.84 Aligned_cols=61 Identities=15% Similarity=0.224 Sum_probs=55.9
Q ss_pred CCcccccCCCCCCCH--HHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhc
Q 005918 91 IDFYQALGAETHFLG--DGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQG 155 (670)
Q Consensus 91 lDYYeILGVs~~AS~--eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~ 155 (670)
.+||+||||+++|+. ++||+|||+++++ |||++.+ .++|+.|++||+||+||.+|+.||..
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~ 71 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDF 71 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhc
Confidence 589999999999999 9999999999987 7999876 35899999999999999999999964
No 24
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.32 E-value=1.8e-12 Score=128.11 Aligned_cols=67 Identities=15% Similarity=0.169 Sum_probs=58.2
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHhC-CCCCCCChH-----HHHHHHHHHHHHHHhcCCchhhHHHhhccc
Q 005918 91 IDFYQALGAETH--FLGDGIRRAYEARISK-PPQYGFSPD-----ALISRRQILQAACETLANASSRREYNQGLA 157 (670)
Q Consensus 91 lDYYeILGVs~~--AS~eEIKkAYRklal~-~PDk~~s~e-----aa~~RfqlI~eAYeVLSDp~kR~~YD~~L~ 157 (670)
.|||+||||+++ ++.++||++||+++++ |||++.+.. .+.++|+.|++||+||+||.+|+.||..+.
T Consensus 43 ~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 43 RDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp CCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 599999999997 6899999999999987 899875421 245689999999999999999999998764
No 25
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.30 E-value=2e-13 Score=132.16 Aligned_cols=63 Identities=13% Similarity=0.149 Sum_probs=54.8
Q ss_pred CCcccccCCCCCCC--HHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhccc
Q 005918 91 IDFYQALGAETHFL--GDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (670)
Q Consensus 91 lDYYeILGVs~~AS--~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~ 157 (670)
.|||+||||+++|+ .+|||+|||+++++ |||++.++ ++|+.|++||++|+||.+|+.||....
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~----e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE----EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC----TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH----HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 58999999999999 69999999999987 79997663 579999999999999999999999763
No 26
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.28 E-value=6.4e-13 Score=112.72 Aligned_cols=59 Identities=17% Similarity=0.060 Sum_probs=52.8
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHh
Q 005918 91 IDFYQALGAETH--FLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYN 153 (670)
Q Consensus 91 lDYYeILGVs~~--AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD 153 (670)
.++|+||||+++ ++.++||+|||+++++ |||++.+. ++|+.|++||++|+|+.+|..++
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~----~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSH----ALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCH----HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCH----HHHHHHHHHHHHHhhHHHHHHHh
Confidence 479999999999 9999999999999987 79997653 58999999999999999998743
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.26 E-value=6e-13 Score=129.68 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=55.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChH---HHHHHHHHHHHHHHhcCCchhhHHH
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPD---ALISRRQILQAACETLANASSRREY 152 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~e---aa~~RfqlI~eAYeVLSDp~kR~~Y 152 (670)
.|||+||||+++|+.++||+|||+++++ |||++.... .++++|+.|++||+||+||.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 5899999999999999999999999886 799875432 2678999999999999999999887
No 28
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.25 E-value=1.9e-12 Score=125.64 Aligned_cols=65 Identities=18% Similarity=0.254 Sum_probs=57.6
Q ss_pred CCCccccc------CCCC-CCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhccc
Q 005918 90 PIDFYQAL------GAET-HFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (670)
Q Consensus 90 PlDYYeIL------GVs~-~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~ 157 (670)
..|||+|| |+++ +++.++||+|||+++++ |||++.+ +..+|+.|++||+||+||.+|+.||..+.
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~ 82 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKLL 82 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 36999999 5765 89999999999999987 7999765 45689999999999999999999999883
No 29
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.24 E-value=1e-12 Score=114.06 Aligned_cols=59 Identities=10% Similarity=-0.013 Sum_probs=53.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHhcCCchhh
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSR 149 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~-eaa~~RfqlI~eAYeVLSDp~kR 149 (670)
.++|+||||+++|+.+|||+|||+++++ |||++... +.++++|+.|++||++|+|...|
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 5899999999999999999999999987 79998764 45778999999999999998777
No 30
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.22 E-value=1.2e-12 Score=147.47 Aligned_cols=71 Identities=20% Similarity=0.232 Sum_probs=40.6
Q ss_pred cCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhhHHHhhcccCC
Q 005918 89 IPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (670)
Q Consensus 89 iPlDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR~~YD~~L~e~ 159 (670)
...|||+||||+++|+.+|||+|||+++++ |||++.+.+.+.++|+.|++||++|+||.+|+.||....++
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~ 90 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 90 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC----
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccc
Confidence 346999999999999999999999999987 79998666667889999999999999999999999986543
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.19 E-value=3.6e-12 Score=105.83 Aligned_cols=55 Identities=15% Similarity=0.113 Sum_probs=49.2
Q ss_pred CCcccccCCCC-CCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcCCchhh
Q 005918 91 IDFYQALGAET-HFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSR 149 (670)
Q Consensus 91 lDYYeILGVs~-~AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLSDp~kR 149 (670)
.++|+||||++ +++.++||+|||+++++ |||++.++ .+|+.|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~----~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP----FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCH----HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH----HHHHHHHHHHHHHhhhhhc
Confidence 58999999999 79999999999999987 79997654 3799999999999998766
No 32
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.18 E-value=3.1e-12 Score=112.38 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=48.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChH---HHHHHHHHHHHHHHhcCC
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPD---ALISRRQILQAACETLAN 145 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~s~e---aa~~RfqlI~eAYeVLSD 145 (670)
.+||++|||++.||.+|||+|||+++++ |||++.+.+ .++.+|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 4899999999999999999999999886 799876432 467899999999999975
No 33
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.17 E-value=4.2e-12 Score=113.68 Aligned_cols=56 Identities=14% Similarity=0.181 Sum_probs=48.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCC----ChH---HHHHHHHHHHHHHHhcCCch
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGF----SPD---ALISRRQILQAACETLANAS 147 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal~-~PDk~~----s~e---aa~~RfqlI~eAYeVLSDp~ 147 (670)
.|||+|||++. ||.++||+|||+++++ |||++. +.+ .++++|+.|++||+||+|+.
T Consensus 41 ~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 41 SGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 59999999996 9999999999999987 899854 222 35789999999999999975
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.67 E-value=1.2e-08 Score=102.59 Aligned_cols=65 Identities=22% Similarity=0.289 Sum_probs=52.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHh-CCCCCCCCh---HHHHHHHHHHHHHHHhcCCchhhHHHhhc
Q 005918 91 IDFYQALGAETHFLGDGIRRAYEARIS-KPPQYGFSP---DALISRRQILQAACETLANASSRREYNQG 155 (670)
Q Consensus 91 lDYYeILGVs~~AS~eEIKkAYRklal-~~PDk~~s~---eaa~~RfqlI~eAYeVLSDp~kR~~YD~~ 155 (670)
.+||.+||+.+.++.++|+++|+++++ .|||+..++ ..++.+|+.|.+||++|+||++|+.||.+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~g 450 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDG 450 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC------
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccCC
Confidence 489999999999999999999999765 579987765 35678999999999999999999999964
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.07 E-value=2e-06 Score=71.22 Aligned_cols=49 Identities=18% Similarity=0.099 Sum_probs=41.2
Q ss_pred CcccccCCCCC---CCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhcC
Q 005918 92 DFYQALGAETH---FLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLA 144 (670)
Q Consensus 92 DYYeILGVs~~---AS~eEIKkAYRklal~-~PDk~~s~eaa~~RfqlI~eAYeVLS 144 (670)
+-|+||||+++ ++.++|+++||++... |||+|-|+.- +..|++|+++|.
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl----~~ki~~Ake~l~ 57 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYL----QSKVYRAAERLK 57 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHH----HHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHH----HHHHHHHHHHHH
Confidence 34899999999 9999999999999765 7999988642 446889999884
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=90.29 E-value=0.13 Score=57.44 Aligned_cols=48 Identities=15% Similarity=0.121 Sum_probs=38.8
Q ss_pred CcCCCcccccCCCCCCCH--HHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHh
Q 005918 88 SIPIDFYQALGAETHFLG--DGIRRAYEARISKPPQYGFSPDALISRRQILQAACET 142 (670)
Q Consensus 88 ~iPlDYYeILGVs~~AS~--eEIKkAYRklal~~PDk~~s~eaa~~RfqlI~eAYeV 142 (670)
....|||.+||++.+... .+|++|||++++..|+. ..|+.++..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 334569999999777766 77999999999887664 3689999999876
No 37
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=75.59 E-value=26 Score=28.33 Aligned_cols=77 Identities=9% Similarity=0.110 Sum_probs=53.1
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~P~L 258 (670)
++.+.|+++++++.-+++++-... ..++ +..+|.-....+ +++.|.+.+++++++-...+ -...
T Consensus 16 ~~~~~g~~~~A~~~~~~al~~~p~---~~~a-------~~~lg~~~~~~g--~~~~A~~~~~~al~l~~~~~----~~~~ 79 (100)
T 3ma5_A 16 EHLKHDNASRALALFEELVETDPD---YVGT-------YYHLGKLYERLD--RTDDAIDTYAQGIEVAREEG----TQKD 79 (100)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTT---CTHH-------HHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHS----CHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC---cHHH-------HHHHHHHHHHcC--CHHHHHHHHHHHHhhhhcCC----chhH
Confidence 567889999999999999864321 2233 333333333343 59999999999999988876 4666
Q ss_pred HHHHHHHhHhhCh
Q 005918 259 QAQIDETLEEINP 271 (670)
Q Consensus 259 q~eIe~~L~eL~P 271 (670)
..++...|.++-+
T Consensus 80 ~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 80 LSELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccc
Confidence 7777777765543
No 38
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=74.12 E-value=18 Score=31.50 Aligned_cols=84 Identities=14% Similarity=0.067 Sum_probs=57.7
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~P~L 258 (670)
++.+.|++++.++.-++.+.-....+. ....+.++..++.-.+..+ ++..|...+++|+++.++.| -+..
T Consensus 116 ~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~----~~~~ 185 (203)
T 3gw4_A 116 VALHFGDLAGARQEYEKSLVYAQQADD----QVAIACAFRGLGDLAQQEK--NLLEAQQHWLRARDIFAELE----DSEA 185 (203)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT----CHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhccc----hHHHHHHHHHHHHHHHHCc--CHHHHHHHHHHHHHHHHHcC----CHHH
Confidence 556788888888888877753111111 1223444555666666664 59999999999999999987 5777
Q ss_pred HHHHHHHhHhhChh
Q 005918 259 QAQIDETLEEINPR 272 (670)
Q Consensus 259 q~eIe~~L~eL~Py 272 (670)
..++...+.++.|.
T Consensus 186 ~~~~~~~~~~~~~~ 199 (203)
T 3gw4_A 186 VNELMTRLNGLEHH 199 (203)
T ss_dssp HHHHHHHHHTTCC-
T ss_pred HHHHHhcccchhhc
Confidence 78888877777553
No 39
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=63.03 E-value=92 Score=28.50 Aligned_cols=196 Identities=11% Similarity=0.043 Sum_probs=104.1
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~P~L 258 (670)
.+.+.|+++++++.=+++++.....+...+..+-+|.+|.. . .+|..|...+++.++ ....+...+..
T Consensus 13 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-------~--~~~~~A~~~~~~~l~---~~P~~~~~~~a 80 (225)
T 2yhc_A 13 QKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-------N--ADLPLAQAAIDRFIR---LNPTHPNIDYV 80 (225)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-------T--TCHHHHHHHHHHHHH---HCTTCTTHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-------c--CCHHHHHHHHHHHHH---HCcCCCcHHHH
Confidence 46678999999999888887544455556666666655533 3 358888887777765 34333333444
Q ss_pred HHHHHHHhHhhChhhHHHhhCCCCChhhHHHHHHHHHHHHHHHHHhcCCCCCccCCCCChHHHHHHHHhhccHHHHHHhh
Q 005918 259 QAQIDETLEEINPRCVLELLGLPLSGEYQARREEGLHGMLNILWAVGGGGATAIAGGFTRESFMNEAFLRMTSAEQVKLF 338 (670)
Q Consensus 259 q~eIe~~L~eL~PyriLELLalPL~~e~~~~Rq~GL~lLr~lL~~rGg~G~~~~~~gl~~edFL~q~~~~LTa~EQvdLF 338 (670)
.-.+-..+.++.+..+-.++.+........+-.+++..++.++..-.. +...+ + +...|..... .+
T Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~-------~~~a~-~----a~~~l~~~~~-~~- 146 (225)
T 2yhc_A 81 MYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPN-------SQYTT-D----ATKRLVFLKD-RL- 146 (225)
T ss_dssp HHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTT-------CTTHH-H----HHHHHHHHHH-HH-
T ss_pred HHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcC-------ChhHH-H----HHHHHHHHHH-HH-
Confidence 444444455444443333333332222223567888888888874311 11111 1 1111110000 00
Q ss_pred hcCCCCCCchhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhc
Q 005918 339 SATPNSIPAETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLV 418 (670)
Q Consensus 339 ~~~~~~~s~da~~~YlaalAliA~GFa~rkP~lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLL 418 (670)
...-|..+..+...| -..+|...++++.+. . |......+...-++.|..-+
T Consensus 147 ----------~~~~~~~a~~~~~~~-------~~~~A~~~~~~~l~~----~--------p~~~~~~~a~~~l~~~~~~~ 197 (225)
T 2yhc_A 147 ----------AKYEYSVAEYYTERG-------AWVAVVNRVEGMLRD----Y--------PDTQATRDALPLMENAYRQM 197 (225)
T ss_dssp ----------HHHHHHHHHHHHHHT-------CHHHHHHHHHHHHHH----S--------TTSHHHHHHHHHHHHHHHHT
T ss_pred ----------HHHHHHHHHHHHHcC-------cHHHHHHHHHHHHHH----C--------cCCCccHHHHHHHHHHHHHc
Confidence 000122233333333 346777777777643 1 11223357888999999999
Q ss_pred CChHHHHHHhc
Q 005918 419 GKLDECRLWLG 429 (670)
Q Consensus 419 GqveeA~~~L~ 429 (670)
|+.++|...+.
T Consensus 198 g~~~~A~~~~~ 208 (225)
T 2yhc_A 198 QMNAQAEKVAK 208 (225)
T ss_dssp TCHHHHHHHHH
T ss_pred CCcHHHHHHHH
Confidence 99999999984
No 40
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=54.66 E-value=61 Score=34.69 Aligned_cols=81 Identities=17% Similarity=0.311 Sum_probs=56.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCCCCCC
Q 005918 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLA 255 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~---~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~ 255 (670)
++...|+|++++.+.++.|.- .+|... .|++ .++--||.-.+.++ +|+.|..++++|++++...=++ --
T Consensus 349 ~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H-p~~a----~~l~nLa~~~~~qg--~~~eA~~~~~~Al~i~~~~lG~-~H 420 (433)
T 3qww_A 349 VCLYMQDWEGALKYGQKIIKPYSKHYPVYS-LNVA----SMWLKLGRLYMGLE--NKAAGEKALKKAIAIMEVAHGK-DH 420 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHSCSSC-HHHH----HHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTCT-TC
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHcCCCC-hHHH----HHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHcCC-CC
Confidence 567889999999999999953 345433 4543 34456666677775 6999999999999999886221 23
Q ss_pred hHHHHHHHHHhHh
Q 005918 256 PDLQAQIDETLEE 268 (670)
Q Consensus 256 P~Lq~eIe~~L~e 268 (670)
|..+ +++..|++
T Consensus 421 p~~~-~l~~~l~~ 432 (433)
T 3qww_A 421 PYIS-EIKQEIES 432 (433)
T ss_dssp HHHH-HHHHHHHC
T ss_pred hHHH-HHHHHHhc
Confidence 5444 36666654
No 41
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=54.26 E-value=55 Score=34.79 Aligned_cols=64 Identities=13% Similarity=0.132 Sum_probs=49.4
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHh
Q 005918 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~---~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~ 249 (670)
++...|+|++.+.+.++.|.- .+|... +|+ |.++..||.-.+.++ +|+.|..++++|++++...
T Consensus 338 ~y~~~g~~~eA~~~~~~~L~i~~~~lg~~H-p~~----a~~l~nLa~~~~~~g--~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 338 ACINLGLLEEALFYGTRTMEPYRIFFPGSH-PVR----GVQVMKVGKLQLHQG--MFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHSCSSC-HHH----HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccHHHHHHHHHHHHHhHHHHcCCCC-hHH----HHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHh
Confidence 567889999999999999963 345433 443 455666677777775 5999999999999999986
No 42
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=54.00 E-value=84 Score=25.21 Aligned_cols=77 Identities=13% Similarity=0.073 Sum_probs=50.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~P~L 258 (670)
++...|+++..++.-+.+++-.. . ..++. ..++.-.+..+ ++..|...+++++++-...+ -...
T Consensus 28 ~~~~~g~~~~A~~~~~~al~~~p-~--~~~~~-------~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~----~~~~ 91 (115)
T 2kat_A 28 TYAEHEQFDAALPHLRAALDFDP-T--YSVAW-------KWLGKTLQGQG--DRAGARQAWESGLAAAQSRG----DQQV 91 (115)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-T--CHHHH-------HHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHT----CHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHCC-C--cHHHH-------HHHHHHHHHcC--CHHHHHHHHHHHHHhccccc----cHHH
Confidence 55678999998888888886421 1 12333 33333334443 58999999999999987765 4556
Q ss_pred HHHHHHHhHhhCh
Q 005918 259 QAQIDETLEEINP 271 (670)
Q Consensus 259 q~eIe~~L~eL~P 271 (670)
..++...|.+|..
T Consensus 92 ~~~l~~~l~~l~~ 104 (115)
T 2kat_A 92 VKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc
Confidence 6667666665543
No 43
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=53.72 E-value=54 Score=27.72 Aligned_cols=77 Identities=17% Similarity=0.053 Sum_probs=52.1
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~P~L 258 (670)
++.+.|++++.++.-+..++-.. ...++.+.++.++ +..+ +++.|...+++++++--... -...+
T Consensus 61 ~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~~lg~~~-------~~~g--~~~~A~~~~~~al~~~p~~~---~~~~~ 125 (142)
T 2xcb_A 61 CRQSLGLYEQALQSYSYGALMDI---NEPRFPFHAAECH-------LQLG--DLDGAESGFYSARALAAAQP---AHEAL 125 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT---TCTHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHHTCG---GGHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhcCC---CCcHHHHHHHHHH-------HHcC--CHHHHHHHHHHHHHhCCCCc---chHHH
Confidence 56789999999999998886422 1233434444333 3333 58899999999998876432 35677
Q ss_pred HHHHHHHhHhhC
Q 005918 259 QAQIDETLEEIN 270 (670)
Q Consensus 259 q~eIe~~L~eL~ 270 (670)
..+++.-|..+.
T Consensus 126 ~~~~~~~l~~l~ 137 (142)
T 2xcb_A 126 AARAGAMLEAVT 137 (142)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777777654
No 44
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=47.44 E-value=86 Score=27.19 Aligned_cols=77 Identities=13% Similarity=0.119 Sum_probs=51.2
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~P~L 258 (670)
++.+.|++++.++.-+.+++-.. ...++.+.++.+| +..+ ++..|...+++++++-... +-+..+
T Consensus 64 ~~~~~g~~~~A~~~~~~al~l~p---~~~~~~~~lg~~~-------~~~g--~~~~A~~~~~~al~~~p~~---~~~~~~ 128 (148)
T 2vgx_A 64 CRQAMGQYDLAIHSYSYGAVMDI---XEPRFPFHAAECL-------LQXG--ELAEAESGLFLAQELIANX---PEFXEL 128 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST---TCTHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHTTC---GGGHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhcCC---CCchHHHHHHHHH-------HHcC--CHHHHHHHHHHHHHHCcCC---CcchHH
Confidence 56789999999999888886321 1233333333333 3343 5889999999998876543 235677
Q ss_pred HHHHHHHhHhhC
Q 005918 259 QAQIDETLEEIN 270 (670)
Q Consensus 259 q~eIe~~L~eL~ 270 (670)
+..++..|..++
T Consensus 129 ~~~~~~~l~~l~ 140 (148)
T 2vgx_A 129 STRVSSMLEAIK 140 (148)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHHH
Confidence 788887777665
No 45
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=46.49 E-value=42 Score=27.13 Aligned_cols=66 Identities=12% Similarity=0.049 Sum_probs=42.0
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhC
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (670)
++.+.|+++++++.-++.++-....... -..+.++..++.-.+..+ ++..|.+.+++++++.++.|
T Consensus 98 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~----~~~~~~~~~la~~~~~~g--~~~~A~~~~~~a~~~~~~~~ 163 (164)
T 3ro3_A 98 TYTLLQDYEKAIDYHLKHLAIAQELKDR----IGEGRACWSLGNAYTALG--NHDQAMHFAEKHLEISREVG 163 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCH----HHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHccch----HhHHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHHHHHhC
Confidence 4567888888888887777532111111 122444555666666665 48999999999999887643
No 46
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=44.27 E-value=1.3e+02 Score=24.40 Aligned_cols=79 Identities=14% Similarity=0.066 Sum_probs=50.8
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~P~L 258 (670)
++..+|+++++++.-+.+++-.. . ..+....++.++ +..+ +|..|...+++++++-...+..+--+.+
T Consensus 47 ~~~~~~~~~~A~~~~~~al~~~p-~--~~~~~~~lg~~~-------~~~~--~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 47 ALAKLMSFPEAIADCNKAIEKDP-N--FVRAYIRKATAQ-------IAVK--EYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-T--CHHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCC-C--cHHHHHHHHHHH-------HHHh--CHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 55688999999999999987421 1 233333333333 3343 5999999999999987554432334566
Q ss_pred HHHHHHHhHhh
Q 005918 259 QAQIDETLEEI 269 (670)
Q Consensus 259 q~eIe~~L~eL 269 (670)
...|.....++
T Consensus 115 ~~~l~~~~~~l 125 (126)
T 3upv_A 115 DQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 66666655544
No 47
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=44.06 E-value=28 Score=28.09 Aligned_cols=44 Identities=11% Similarity=0.029 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|...|++.... .....+.....|.|+.-+|+.++|...+.
T Consensus 22 ~~~~A~~~~~~al~~---------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~ 65 (100)
T 3ma5_A 22 NASRALALFEELVET---------------DPDYVGTYYHLGKLYERLDRTDDAIDTYA 65 (100)
T ss_dssp CHHHHHHHHHHHHHH---------------STTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 457888888887654 12235788999999999999999999984
No 48
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=43.09 E-value=72 Score=26.30 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=29.9
Q ss_pred HHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHh
Q 005918 214 ALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (670)
Q Consensus 214 ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~ 249 (670)
|.-|+++|+-.+.++ +|..|...++.|++++...
T Consensus 5 a~dc~~lG~~~~~~~--~y~~A~~W~~~Al~~~~~~ 38 (104)
T 2v5f_A 5 AEDCFELGKVAYTEA--DYYHTELWMEQALRQLDEG 38 (104)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcc--chHHHHHHHHHHHHhhhcc
Confidence 567999999999986 5999999999999998754
No 49
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=42.99 E-value=1.3e+02 Score=24.17 Aligned_cols=64 Identities=17% Similarity=0.085 Sum_probs=44.4
Q ss_pred HHHHhhhHHHHHHHHHHHhhhc--CCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhC
Q 005918 179 VLQEAGETEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~--l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (670)
++...|++++.++.-++.++-. .+.. ...+.++..++.-.+..+ +|+.|.+.+++++++.++.+
T Consensus 58 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~------~~~~~~~~~l~~~~~~~~--~~~~A~~~~~~a~~~~~~~~ 123 (164)
T 3ro3_A 58 AYIFLGEFETASEYYKKTLLLARQLKDR------AVEAQSCYSLGNTYTLLQ--DYEKAIDYHLKHLAIAQELK 123 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCc------HHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHcc
Confidence 4567899999888888888532 1111 123444555665555664 59999999999999998875
No 50
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=39.03 E-value=1.3e+02 Score=32.75 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=48.0
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHh
Q 005918 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~---~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~ 249 (670)
++...|+|+++..+.++.|.- .+|... +|+ |.++-.||.-.+.++ +|+.|..++++|+.++++.
T Consensus 360 ~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H-p~~----a~~l~nLa~~~~~~G--~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 360 VLSYLQAYEEASHYARRMVDGYMKLYHHNN-AQL----GMAVMRAGLTNWHAG--HIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHSCTTC-HHH----HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHcCCCC-HHH----HHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHH
Confidence 667889999999999999963 355433 443 344455566666664 6999999999999999886
No 51
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=37.61 E-value=2.3e+02 Score=27.50 Aligned_cols=45 Identities=13% Similarity=0.256 Sum_probs=36.3
Q ss_pred chHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 370 HLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 370 ~lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
....+|..+++++... . ....++...+|+|..-+|+.++|...|.
T Consensus 180 ~~~~eA~~~~~~~l~~----~-----------p~~~~~~~~la~~~~~~g~~~eA~~~l~ 224 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADK----C-----------SPTLLLLNGQAACHMAQGRWEAAEGVLQ 224 (291)
T ss_dssp THHHHHHHHHHHHHHH----S-----------CCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHh----C-----------CCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5678899999988754 1 1235788899999999999999999984
No 52
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=35.50 E-value=46 Score=27.16 Aligned_cols=44 Identities=7% Similarity=0.012 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|...|++..+. .....++....|.|..-+|+.++|...+.
T Consensus 42 ~~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 85 (117)
T 3k9i_A 42 EYRKAEAVLANGVKQ---------------FPNHQALRVFYAMVLYNLGRYEQGVELLL 85 (117)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCCchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 467888888887654 12236888999999999999999999884
No 53
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=35.44 E-value=1.4e+02 Score=23.83 Aligned_cols=58 Identities=7% Similarity=-0.028 Sum_probs=39.8
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHH
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (670)
++.+.|+++..++.-+.+++.........++.+.+|.++.. .+ ++..|...++++++.
T Consensus 48 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~-------~g--~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 48 SYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG-------EG--KNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-------TT--CHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-------cC--CHHHHHHHHHHHHHH
Confidence 45688999999999999887544444445666655555433 32 488888888877764
No 54
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=34.50 E-value=1.3e+02 Score=24.35 Aligned_cols=55 Identities=15% Similarity=0.192 Sum_probs=38.5
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHH
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (670)
++...|+++++++.-++.++.... ..++...++.++.. .+ +|..|...+++++++
T Consensus 36 ~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~-------~g--~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 36 TFRTLGEYRKAEAVLANGVKQFPN---HQALRVFYAMVLYN-------LG--RYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHH-------HT--CHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC---chHHHHHHHHHHHH-------cC--CHHHHHHHHHHHHHh
Confidence 567899999999999999874221 25555555555433 32 488888899888875
No 55
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=34.40 E-value=48 Score=28.06 Aligned_cols=44 Identities=20% Similarity=0.229 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|...+++.... .....++++..|.|..-+|+.++|..++.
T Consensus 67 ~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 110 (142)
T 2xcb_A 67 LYEQALQSYSYGALM---------------DINEPRFPFHAAECHLQLGDLDGAESGFY 110 (142)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhc---------------CCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456788888777643 12235788999999999999999999984
No 56
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=33.94 E-value=96 Score=24.86 Aligned_cols=56 Identities=7% Similarity=-0.131 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 352 ~YlaalAliA~GFa~rkP~lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
.|.-+.++...| -..+|...|++..+. .....+.....|.|+.-+|+.++|...+.
T Consensus 22 ~~~lg~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 77 (115)
T 2kat_A 22 RFTLGKTYAEHE-------QFDAALPHLRAALDF---------------DPTYSVAWKWLGKTLQGQGDRAGARQAWE 77 (115)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHcc-------CHHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 444444554443 356788888877643 11225778899999999999999999984
No 57
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=33.50 E-value=73 Score=24.69 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|...+++.... .....++...+|.|.+-+|+.++|...+.
T Consensus 19 ~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 62 (111)
T 2l6j_A 19 LYREAVHCYDQLITA---------------QPQNPVGYSNKAMALIKLGEYTQAIQMCQ 62 (111)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc---------------CCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 356777777776543 11225788899999999999999999884
No 58
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=32.41 E-value=1.7e+02 Score=23.35 Aligned_cols=58 Identities=9% Similarity=0.032 Sum_probs=40.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHH
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (670)
.+.+.|++++.++.-+.+++.........++.+.++.++. .. .+|..|...+++++++
T Consensus 11 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-------~~--~~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 11 DALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-------AT--RNFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-------HT--TCHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-------Hh--ccHHHHHHHHHHHHHH
Confidence 4567899999999999988765555555566655555543 33 3588888888887764
No 59
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=31.89 E-value=1e+02 Score=24.36 Aligned_cols=45 Identities=7% Similarity=-0.223 Sum_probs=34.7
Q ss_pred chHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 370 HLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 370 ~lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
.-..+|...+++..+. .....++....|.|..-+|+.++|...+.
T Consensus 64 ~~~~~A~~~~~~a~~~---------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 108 (133)
T 2lni_A 64 LEFQLALKDCEECIQL---------------EPTFIKGYTRKAAALEAMKDYTKAMDVYQ 108 (133)
T ss_dssp TCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHh---------------CCCchHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3467888888877653 01235788899999999999999999984
No 60
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=31.35 E-value=1.9e+02 Score=24.23 Aligned_cols=60 Identities=15% Similarity=0.089 Sum_probs=40.9
Q ss_pred HHHHhhhHHHHHHHHHHHhhh--cCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHH
Q 005918 179 VLQEAGETEVVLRIGESLLRE--RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~--~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (670)
++.++|+++++++.-+..|+- .....+ -.+|-+|..++.-....+ +|..|.+.+++++++
T Consensus 51 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~-----~~~a~~~~~lg~~~~~~~--~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 51 VYFEEKKFAECVQFCEKAVEVGRETRADY-----KLIAKAMSRAGNAFQKQN--DLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCCH-----HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHhCcccchhh-----HHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhh
Confidence 567899999999999999862 222222 123445555565554554 599999999998763
No 61
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=30.60 E-value=1e+02 Score=28.87 Aligned_cols=64 Identities=9% Similarity=0.138 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHh
Q 005918 349 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 428 (670)
Q Consensus 349 a~~~YlaalAliA~GFa~rkP~lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L 428 (670)
....|.-+++||- +++|..|++|-.+|+.+-...- .....|-..-.|+.+.-+|+.++|...+
T Consensus 32 ~~~~F~ya~~Lv~----S~~~~~~~~gI~lLe~ll~~~~-------------p~~~rd~lY~LAv~~~kl~~Y~~A~~y~ 94 (152)
T 1pc2_A 32 KSTQFEYAWCLVR----SKYNDDIRKGIVLLEELLPKGS-------------KEEQRDYVFYLAVGNYRLKEYEKALKYV 94 (152)
T ss_dssp HHHHHHHHHHHHT----CSSHHHHHHHHHHHHHHHHHSC-------------HHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhcCC-------------ccchHHHHHHHHHHHHHccCHHHHHHHH
Confidence 3457777788774 7889999999999999986510 1245789999999999999999999998
Q ss_pred c
Q 005918 429 G 429 (670)
Q Consensus 429 ~ 429 (670)
.
T Consensus 95 ~ 95 (152)
T 1pc2_A 95 R 95 (152)
T ss_dssp H
T ss_pred H
Confidence 3
No 62
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=30.58 E-value=3.1e+02 Score=24.92 Aligned_cols=64 Identities=16% Similarity=0.255 Sum_probs=43.1
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhC
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (670)
.+...|+++.++++-+++++.. +... ...+.++..++.-.+..+ +|..|.+.+++++++.++.+
T Consensus 14 ~~~~~g~~~~A~~~~~~al~~~-~~~~-----~~~~~~~~~l~~~~~~~g--~~~~A~~~~~~al~~~~~~~ 77 (338)
T 3ro2_A 14 RLCKSGDCRAGVSFFEAAVQVG-TEDL-----KTLSAIYSQLGNAYFYLH--DYAKALEYHHHDLTLARTIG 77 (338)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC-CSCH-----HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccHHHHHHHHHHHHhhC-cccH-----HHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHhhccc
Confidence 4457788999998888888742 2211 122333444555555554 59999999999999988765
No 63
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=30.44 E-value=2.2e+02 Score=27.14 Aligned_cols=19 Identities=21% Similarity=0.258 Sum_probs=10.9
Q ss_pred hhhHhHHHHHHHHHHHHhC
Q 005918 232 YIGGCEMLERALKLLQEEG 250 (670)
Q Consensus 232 y~~aa~~Le~al~LLqr~G 250 (670)
+..|...+++++++..+.|
T Consensus 323 ~~~A~~~~~~al~~~~~~~ 341 (406)
T 3sf4_A 323 HDQAMHFAEKHLEISREVG 341 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 5555666666666555543
No 64
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=28.96 E-value=74 Score=24.63 Aligned_cols=43 Identities=14% Similarity=0.027 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhhCCCCcccccCccccccchhhhh-hhHHHHHHHHhcCChHHHHHHhc
Q 005918 372 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEME-FALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 372 I~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~D-v~lE~avC~LLLGqveeA~~~L~ 429 (670)
..+|...++++.+. .....+ +.+.+|.|..-+|+.++|...+.
T Consensus 16 ~~~A~~~~~~al~~---------------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 59 (99)
T 2kc7_A 16 IENALQALEEFLQT---------------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQ 59 (99)
T ss_dssp HHHHHHHHHHHHHH---------------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 46788888777643 112246 88999999999999999999984
No 65
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=28.15 E-value=68 Score=27.86 Aligned_cols=43 Identities=21% Similarity=0.134 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 372 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 372 I~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
..+|...+++.... .....+..+..|.|++-+|+.++|..++.
T Consensus 71 ~~~A~~~~~~al~l---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 113 (148)
T 2vgx_A 71 YDLAIHSYSYGAVM---------------DIXEPRFPFHAAECLLQXGELAEAESGLF 113 (148)
T ss_dssp HHHHHHHHHHHHHH---------------STTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---------------CCCCchHHHHHHHHHHHcCCHHHHHHHHH
Confidence 46777777776543 11235788999999999999999999984
No 66
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=27.53 E-value=2.9e+02 Score=23.61 Aligned_cols=57 Identities=16% Similarity=0.127 Sum_probs=33.7
Q ss_pred HhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhC
Q 005918 182 EAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (670)
Q Consensus 182 ElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (670)
+.|+++++.++.+.+.++ +. .. +-++..++.-.+..+ +|..|...+++++++.++.|
T Consensus 4 ~~g~~~~A~~~~~~~~~~--~~-~~-------~~~~~~l~~~~~~~g--~~~~A~~~~~~al~~~~~~~ 60 (203)
T 3gw4_A 4 EAHDYALAERQAQALLAH--PA-TA-------SGARFMLGYVYAFMD--RFDEARASFQALQQQAQKSG 60 (203)
T ss_dssp ---CHHHHHHHHHHHHTS--TT-TH-------HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHTTC
T ss_pred ccccHHHHHHHHHHhcCC--hH-HH-------HHHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHcC
Confidence 567787777755444331 11 12 233344444455554 59999999999999998765
No 67
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=27.32 E-value=74 Score=27.34 Aligned_cols=44 Identities=7% Similarity=-0.012 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|...+++.... .....++...+|.|++-+|+.++|...+.
T Consensus 26 ~~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 69 (164)
T 3sz7_A 26 EYSKAIDLYTQALSI---------------APANPIYLSNRAAAYSASGQHEKAAEDAE 69 (164)
T ss_dssp CHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCcCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 456788888777643 11236888999999999999999999984
No 68
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=27.22 E-value=3.5e+02 Score=24.49 Aligned_cols=131 Identities=10% Similarity=0.024 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhcCCc-hhhHHHhhcccCCCCCCccccCCCCCccchHHHH----
Q 005918 106 DGIRRAYEARISKPPQYGFSPDALISRRQILQAACETLANA-SSRREYNQGLADDHADTILTEVPWDKVPGALLVL---- 180 (670)
Q Consensus 106 eEIKkAYRklal~~PDk~~s~eaa~~RfqlI~eAYeVLSDp-~kR~~YD~~L~e~~~~~~~lei~~~~~~GAL~LL---- 180 (670)
++-.+.|.+....+|+...... .. -.+..+|.-++|. +-...|+..+...... . ..+...+.=+.+..
T Consensus 21 ~~A~~~~~~~~~~~p~~~~~~~---a~-~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~-~--~~~~a~~~~g~~~~~~~~ 93 (225)
T 2yhc_A 21 RQAITQLEALDNRYPFGPYSQQ---VQ-LDLIYAYYKNADLPLAQAAIDRFIRLNPTH-P--NIDYVMYMRGLTNMALDD 93 (225)
T ss_dssp HHHHHHHHHHHHHCTTSTTHHH---HH-HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-T--THHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCChHHHH---HH-HHHHHHHHhcCCHHHHHHHHHHHHHHCcCC-C--cHHHHHHHHHHHHHhhhh
Confidence 4445667777777777543222 22 2356777777773 3445666665433210 0 00001111122222
Q ss_pred -------------HHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHH-------HHhhHhhHHHHHhCCCchhhHhHHHH
Q 005918 181 -------------QEAGETEVVLRIGESLLRERLPKSFKQDVVLAMA-------LAYVDISRDAMAFNPPDYIGGCEMLE 240 (670)
Q Consensus 181 -------------qElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~A-------LA~~elarea~~q~~~~y~~aa~~Le 240 (670)
.+.|+++..++.=+.+++.........+...-++ -++..++.-.+.++ +|..|...++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~--~~~~A~~~~~ 171 (225)
T 2yhc_A 94 SALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERG--AWVAVVNRVE 171 (225)
T ss_dssp --------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHH
T ss_pred hhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--cHHHHHHHHH
Confidence 2367888888888888875433333333222221 12233444444443 4777777777
Q ss_pred HHHHH
Q 005918 241 RALKL 245 (670)
Q Consensus 241 ~al~L 245 (670)
++++.
T Consensus 172 ~~l~~ 176 (225)
T 2yhc_A 172 GMLRD 176 (225)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 69
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=26.97 E-value=93 Score=23.17 Aligned_cols=44 Identities=14% Similarity=0.096 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|...+++.... .....++....|.|..-+|+.++|..++.
T Consensus 24 ~~~~A~~~~~~a~~~---------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 67 (91)
T 1na3_A 24 DYDEAIEYYQKALEL---------------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67 (91)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 356788888776643 01125778899999999999999999884
No 70
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=26.79 E-value=4.4e+02 Score=25.48 Aligned_cols=64 Identities=13% Similarity=0.193 Sum_probs=43.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhC
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (670)
.+...|++++.+++-+++++-.. .. . ...+-++..++.-.+..+ +|..|.+.+++++++.++.+
T Consensus 57 ~~~~~g~~~~A~~~~~~al~~~~-~~--~---~~~~~~~~~lg~~~~~~g--~~~~A~~~~~~al~~~~~~~ 120 (411)
T 4a1s_A 57 RLCNAGDCRAGVAFFQAAIQAGT-ED--L---RTLSAIYSQLGNAYFYLG--DYNKAMQYHKHDLTLAKSMN 120 (411)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCC-SC--H---HHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCcHHHHHHHHHHHHHhcc-cC--h---hHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHcc
Confidence 34567888888888888887421 11 1 122334455555555564 59999999999999998765
No 71
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=26.42 E-value=63 Score=28.91 Aligned_cols=44 Identities=11% Similarity=0.166 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
...+|...+++.... .....+.++..|.|++-+|+.++|...+.
T Consensus 85 ~~~~Ai~~~~~al~l---------------~P~~~~~~~~lg~~~~~lg~~~eA~~~~~ 128 (151)
T 3gyz_A 85 QFQQAADLYAVAFAL---------------GKNDYTPVFHTGQCQLRLKAPLKAKECFE 128 (151)
T ss_dssp CHHHHHHHHHHHHHH---------------SSSCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh---------------CCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456777777776543 11235788999999999999999999984
No 72
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=25.70 E-value=89 Score=25.33 Aligned_cols=56 Identities=11% Similarity=0.004 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 352 ~YlaalAliA~GFa~rkP~lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
.+.-+.++...| -..+|...+++..+. .....+..+.+|.|...+|+.++|...+.
T Consensus 41 ~~~~a~~~~~~~-------~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~ 96 (126)
T 3upv_A 41 YSNRAAALAKLM-------SFPEAIADCNKAIEK---------------DPNFVRAYIRKATAQIAVKEYASALETLD 96 (126)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhc-------CHHHHHHHHHHHHHh---------------CCCcHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 344445554443 456777777776543 11235788999999999999999999984
No 73
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=25.51 E-value=67 Score=28.74 Aligned_cols=57 Identities=11% Similarity=0.200 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 351 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 351 ~~YlaalAliA~GFa~rkP~lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
..|.-++++...| -..+|...|+++... .....+....+|.|..-+|+.++|...+.
T Consensus 38 ~~~~lg~~~~~~g-------~~~eA~~~~~~al~~---------------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 38 DIYSYAYDFYNKG-------RIEEAEVFFRFLCIY---------------DFYNVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp HHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-------CHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 3445555555444 467899999888754 12336888999999999999999999984
No 74
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=24.20 E-value=91 Score=26.73 Aligned_cols=56 Identities=11% Similarity=-0.075 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 352 ~YlaalAliA~GFa~rkP~lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
.|.-+.++...| -..+|...+++.... .....+..+.+|.|+.-+|+.++|...+.
T Consensus 48 ~~~l~~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 103 (164)
T 3sz7_A 48 LSNRAAAYSASG-------QHEKAAEDAELATVV---------------DPKYSKAWSRLGLARFDMADYKGAKEAYE 103 (164)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcc-------CHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 444455555444 356788888777643 11236888999999999999999999984
No 75
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=24.02 E-value=74 Score=25.19 Aligned_cols=43 Identities=7% Similarity=0.033 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 372 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 372 I~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
..+|...+++.... .....++....|.|...+|+.++|...+.
T Consensus 32 ~~~A~~~~~~al~~---------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 74 (133)
T 2lni_A 32 YPQAMKHYTEAIKR---------------NPKDAKLYSNRAACYTKLLEFQLALKDCE 74 (133)
T ss_dssp SHHHHHHHHHHHTT---------------CTTCHHHHHHHHHHHTTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc---------------CCCcHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 46788888877643 11236888999999999999999999884
No 76
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=23.74 E-value=1.2e+02 Score=23.38 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|..++++..... ....+.....+.|..-.|+.++|..++.
T Consensus 24 ~~~~A~~~~~~~~~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 67 (125)
T 1na0_A 24 DYDEAIEYYQKALELD---------------PNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67 (125)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHC---------------cCcHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4567888888776430 1124678889999999999999998884
No 77
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.58 E-value=1.1e+02 Score=24.85 Aligned_cols=44 Identities=16% Similarity=0.141 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|...+++..+. .....++....|.|...+|+.++|..++.
T Consensus 80 ~~~~A~~~~~~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 123 (148)
T 2dba_A 80 DYDKAETEASKAIEK---------------DGGDVKALYRRSQALEKLGRLDQAVLDLQ 123 (148)
T ss_dssp CHHHHHHHHHHHHHH---------------TSCCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh---------------CccCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456788887776543 01125788999999999999999999984
No 78
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=23.36 E-value=1.6e+02 Score=24.43 Aligned_cols=56 Identities=21% Similarity=0.112 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 352 ~YlaalAliA~GFa~rkP~lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
.|.-+.+++..| -..+|...|++..+. .....+..+..|.|..-+|+.++|...+.
T Consensus 20 ~~~~g~~~~~~g-------~~~~A~~~~~~al~~---------------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~ 75 (121)
T 1hxi_A 20 PMEEGLSMLKLA-------NLAEAALAFEAVCQK---------------EPEREEAWRSLGLTQAENEKDGLAIIALN 75 (121)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcC-------CHHHHHHHHHHHHHH---------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 455566666555 356788888777653 12236888899999999999999999884
No 79
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=22.58 E-value=1.2e+02 Score=23.64 Aligned_cols=44 Identities=11% Similarity=0.197 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|..++++..+.. ....++....|.|....|+.++|...+.
T Consensus 19 ~~~~A~~~~~~a~~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 62 (131)
T 1elr_A 19 DFDTALKHYDKAKELD---------------PTNMTYITNQAAVYFEKGDYNKCRELCE 62 (131)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC---------------CccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4678888888776531 1225788899999999999999999984
No 80
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=22.40 E-value=5.3e+02 Score=24.88 Aligned_cols=57 Identities=16% Similarity=0.159 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhhhc--CCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhC
Q 005918 186 TEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (670)
Q Consensus 186 ~e~Vl~lg~~~Lq~~--l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (670)
++.++++-++.++-. .+. . -..+.++..++.-.+..+ +|+.|...+++++++....+
T Consensus 199 ~~~A~~~~~~al~~~~~~~~--~----~~~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~ 257 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDLGD--R----GAQGRACGNLGNTYYLLG--DFQAAIEHHQERLRIAREFG 257 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHTC--H----HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCC--H----HHHHHHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHhcC
Confidence 777777766666421 111 1 123445555666666664 59999999999999988765
No 81
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=22.28 E-value=1.2e+02 Score=23.17 Aligned_cols=44 Identities=14% Similarity=0.003 Sum_probs=31.0
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|...+++.... .....++....|.|.+-+|+.++|...+.
T Consensus 19 ~~~~A~~~~~~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 62 (118)
T 1elw_A 19 NIDDALQCYSEAIKL---------------DPHNHVLYSNRSAAYAKKGDYQKAYEDGC 62 (118)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 356677777766543 01225778888999999999999988874
No 82
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=22.22 E-value=2e+02 Score=27.89 Aligned_cols=67 Identities=18% Similarity=0.044 Sum_probs=39.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCC
Q 005918 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGA 251 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~ 251 (670)
++...|+++++++.-++++......+...+.. -++..++.-.+..+ ++..|...+++++.+.++.|-
T Consensus 262 ~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~----~~~~~la~~~~~~g--~~~~A~~~l~~al~~~~~~g~ 328 (373)
T 1hz4_A 262 AQILLGEFEPAEIVLEELNENARSLRLMSDLN----RNLLLLNQLYWQAG--RKSDAQRVLLDALKLANRTGF 328 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH----HHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHhCcchhhHH----HHHHHHHHHHHHhC--CHHHHHHHHHHHHHHhccccH
Confidence 45567888887777777765321111122221 11222223333443 588999999999999998874
No 83
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.58 E-value=1.7e+02 Score=23.52 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|..++++..+.. |......++....|.|+.-+|+.++|...+.
T Consensus 43 ~~~~A~~~~~~a~~~~------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 89 (148)
T 2dba_A 43 DYGGALAAYTQALGLD------------ATPQDQAVLHRNRAACHLKLEDYDKAETEAS 89 (148)
T ss_dssp CHHHHHHHHHHHHTSC------------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHc------------ccchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 4678888888877540 1111236888899999999999999999884
No 84
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=21.34 E-value=1.1e+02 Score=23.21 Aligned_cols=46 Identities=9% Similarity=-0.032 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhc-CChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLV-GKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLL-GqveeA~~~L~ 429 (670)
-..+|...+++..+..- . ....++....+.|..-+ |+.++|...+.
T Consensus 55 ~~~~A~~~~~~a~~~~~------------~-~~~~~~~~~l~~~~~~~~~~~~~A~~~~~ 101 (112)
T 2kck_A 55 RYEEAVDCYNYVINVIE------------D-EYNKDVWAAKADALRYIEGKEVEAEIAEA 101 (112)
T ss_dssp CHHHHHHHHHHHHHTSC------------C-TTCHHHHHHHHHHHTTCSSCSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCc------------c-cchHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 36788888887765410 0 11357888999999999 99999999984
No 85
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=20.96 E-value=1.4e+02 Score=27.39 Aligned_cols=63 Identities=8% Similarity=0.134 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHh
Q 005918 349 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 428 (670)
Q Consensus 349 a~~~YlaalAliA~GFa~rkP~lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L 428 (670)
....|.-|++||= ++.|+-|+++-.||+.|-..+- .....|-..-.|+.+.=||+.++|+..+
T Consensus 35 ~~~~F~yAw~Lv~----S~~~~d~~~GI~lLe~l~~~~~-------------p~~~Rd~lY~LAvg~yklg~Y~~A~~~~ 97 (126)
T 1nzn_A 35 KSTQFEYAWCLVR----TRYNDDIRKGIVLLEELLPKGS-------------KEEQRDYVFYLAVGNYRLKEYEKALKYV 97 (126)
T ss_dssp HHHHHHHHHHHTT----SSSHHHHHHHHHHHHHHTTTSC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhcCC-------------cchHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 3458888888874 8999999999999999986511 1256799999999999999999999887
No 86
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=20.84 E-value=3.1e+02 Score=22.89 Aligned_cols=56 Identities=16% Similarity=0.116 Sum_probs=0.0
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHH
Q 005918 178 LVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (670)
Q Consensus 178 ~LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (670)
.++.++|+++++++.-+++|+-.... +-++.-+|.--+..+. |+.|.+.+++++++
T Consensus 55 ~~~~~~~~~~~A~~~~~~al~~~p~~----------~~a~~~lg~~~~~~~~--~~~A~~~~~~al~l 110 (126)
T 4gco_A 55 ACLTKLMEFQRALDDCDTCIRLDSKF----------IKGYIRKAACLVAMRE--WSKAQRAYEDALQV 110 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTC----------HHHHHHHHHHHHHTTC--HHHHHHHHHHHHHH
T ss_pred hHHHhhccHHHHHHHHHHHHHhhhhh----------hHHHHHHHHHHHHCCC--HHHHHHHHHHHHHH
No 87
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=20.83 E-value=1.8e+02 Score=26.47 Aligned_cols=67 Identities=10% Similarity=0.071 Sum_probs=53.5
Q ss_pred HHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCCCCCChHHHHHHHHHhHhhChhhHHHhhCCCC
Q 005918 213 MALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDLQAQIDETLEEINPRCVLELLGLPL 282 (670)
Q Consensus 213 ~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~P~Lq~eIe~~L~eL~PyriLELLalPL 282 (670)
-|+-++..|+.+++++ +++...+.+.+|+.++..=. .+|=++--.+|...|..|==|++-+|+.--+
T Consensus 35 gal~~l~~A~~ai~~~--d~~~k~~~i~KA~~Ii~~L~-~sLd~e~GgeiA~nL~~LY~y~~~~L~~An~ 101 (131)
T 3iqc_A 35 GILRFSSQAKRCIENE--DIEKKIYYINRVTDIFTELL-NILDYEKGGEVAVYLTGLYTHQIKVLTQANV 101 (131)
T ss_dssp HHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHH-HTBCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHH-HhcCCccccHHHHHHHHHHHHHHHHHHHhhh
Confidence 3667888899999985 69999999999999886532 3455666679999999999999988875443
No 88
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=20.78 E-value=3.2e+02 Score=22.57 Aligned_cols=56 Identities=11% Similarity=-0.016 Sum_probs=36.4
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhcCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHH
Q 005918 178 LVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (670)
Q Consensus 178 ~LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (670)
..+.+.|++++.++.-+++++.... ..+....++.++ ... .++..|...+++++++
T Consensus 25 ~~~~~~g~~~~A~~~~~~al~~~P~---~~~a~~~lg~~~-------~~~--g~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 25 LSMLKLANLAEAALAFEAVCQKEPE---REEAWRSLGLTQ-------AEN--EKDGLAIIALNHARML 80 (121)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTT---CHHHHHHHHHHH-------HHT--TCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHH-------HHc--CCHHHHHHHHHHHHHh
Confidence 3566889999999998988874221 233433344333 333 2588888888888775
No 89
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=20.52 E-value=1.3e+02 Score=24.28 Aligned_cols=43 Identities=16% Similarity=0.109 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 372 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 372 I~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
..+|...+++.... .....++....|.|+.-+|+.++|...+.
T Consensus 59 ~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 101 (137)
T 3q49_B 59 PEQALADCRRALEL---------------DGQSVKAHFFLGQCQLEMESYDEAIANLQ 101 (137)
T ss_dssp HHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh---------------CchhHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 45677777776543 01235788999999999999999999884
No 90
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=20.27 E-value=2.2e+02 Score=26.99 Aligned_cols=76 Identities=7% Similarity=-0.047 Sum_probs=49.0
Q ss_pred HHHHhhhHHHHHHHHHHHhhhc--CCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhH-hHHHHHHHHHHHHhCCCCCC
Q 005918 179 VLQEAGETEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGG-CEMLERALKLLQEEGASSLA 255 (670)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~--l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~a-a~~Le~al~LLqr~G~~~l~ 255 (670)
++.+.|++++++++-++.|+-. ..... ..+-++..+|.-....+ ++.+| -..+++|+.+.+..+ -
T Consensus 205 ~y~~~~~y~~Al~~~~kal~~~~~~~~~~------~~~~~~~~lg~~y~~~g--~~~~Ai~~~~~~Al~~~~~~~----~ 272 (293)
T 2qfc_A 205 ALYLDSRYEESLYQVNKAIEISCRINSMA------LIGQLYYQRGECLRKLE--YEEAEIEDAYKKASFFFDILE----M 272 (293)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTBCS------SHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHTT----C
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHcC--CcHHHHHHHHHHHHHHHHHhC----c
Confidence 5668899999998888888532 11111 12344555555555554 48899 667999999999887 3
Q ss_pred hHHHHHHHHHh
Q 005918 256 PDLQAQIDETL 266 (670)
Q Consensus 256 P~Lq~eIe~~L 266 (670)
+....+|..-.
T Consensus 273 ~~~~~~~~~~~ 283 (293)
T 2qfc_A 273 HAYKEALVNKI 283 (293)
T ss_dssp HHHHHHHHHHH
T ss_pred HhhHHHHHHHH
Confidence 55555544433
No 91
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=20.09 E-value=3.2e+02 Score=26.05 Aligned_cols=66 Identities=11% Similarity=0.072 Sum_probs=46.7
Q ss_pred HHHHHhhhHHHHHHHHHHHhhh--cCCCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCC
Q 005918 178 LVLQEAGETEVVLRIGESLLRE--RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGA 251 (670)
Q Consensus 178 ~LLqElGE~e~Vl~lg~~~Lq~--~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~ 251 (670)
.+++..|++++.++.-++.++- ..+.. -..|-++..++.-....+ +|..|...+++|+++..+.|.
T Consensus 45 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~------~~~a~~~~~lg~~~~~~g--~~~~A~~~~~~Al~l~~~~g~ 112 (292)
T 1qqe_A 45 TIYRLRKELNLAGDSFLKAADYQKKAGNE------DEAGNTYVEAYKCFKSGG--NSVNAVDSLENAIQIFTHRGQ 112 (292)
T ss_dssp HHHHHTTCTHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHcCC
Confidence 4667888888888877777752 12221 134556667776665654 599999999999999988773
No 92
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=20.06 E-value=4.5e+02 Score=24.48 Aligned_cols=85 Identities=7% Similarity=0.014 Sum_probs=51.0
Q ss_pred HHHHHhhhHHHHHHHHHHHhhh---cC-CCChhHHHHHHHHHHhhHhhHHHHHhCCCchhhHhHHHHHHHHHHHHhCCCC
Q 005918 178 LVLQEAGETEVVLRIGESLLRE---RL-PKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASS 253 (670)
Q Consensus 178 ~LLqElGE~e~Vl~lg~~~Lq~---~l-~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~ 253 (670)
..|.++|+|++.++.....|+- ++ -.+...+.- .- |+.-.+.--... .+|+.|.+.+++|+++--...+
T Consensus 65 ~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~-~~--~~~~rG~aL~~l--gr~eEAl~~y~kAlel~p~d~~-- 137 (159)
T 2hr2_A 65 EALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLW-IS--AVYSRALALDGL--GRGAEAMPEFKKVVEMIEERKG-- 137 (159)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHH-HH--HHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHCCS--
T ss_pred HHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHH-HH--HHHhHHHHHHHC--CCHHHHHHHHHHHHhcCCCcHH--
Confidence 4678999999999999999973 00 011111111 01 113333222222 3699999999999999866542
Q ss_pred CC---hHHHHHHHHHhHhh
Q 005918 254 LA---PDLQAQIDETLEEI 269 (670)
Q Consensus 254 l~---P~Lq~eIe~~L~eL 269 (670)
.. -.++..|++-.++|
T Consensus 138 ~~~~~~~~~~~~~~~~~k~ 156 (159)
T 2hr2_A 138 ETPGKERMMEVAIDRIAQL 156 (159)
T ss_dssp CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 33 35566666666655
No 93
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=20.03 E-value=1.4e+02 Score=23.09 Aligned_cols=44 Identities=7% Similarity=-0.027 Sum_probs=31.7
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhcCChHHHHHHhc
Q 005918 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (670)
Q Consensus 371 lI~~A~~ll~qL~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGqveeA~~~L~ 429 (670)
-..+|...+++.... .....++....|.|...+|+.++|...+.
T Consensus 27 ~~~~A~~~~~~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 70 (131)
T 2vyi_A 27 NFEAAVHFYGKAIEL---------------NPANAVYFCNRAAAYSKLGNYAGAVQDCE 70 (131)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc---------------CCCCHHHHHHHHHHHHHhhchHHHHHHHH
Confidence 356777777776543 01125678889999999999999998874
Done!