Your job contains 1 sequence.
>005922
MADEPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDF
QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVS
YGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE
LMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGG
ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNP
AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ
PTPGGYPGNWDQTPTQQTSQGSGYDYYSQQPSSQQPQAPGGSAAPADSTGYSYSQPPASG
YNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQG
DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQ
SGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAP
PSNYGAATQPGYGSAAYGAPPGGSQAGYGQGPPSYYGGGYSQPVYTADGNAAPAAQPVQQ
GGVTKSPQS
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005922
(669 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043530 - symbol:AT2G25970 "AT2G25970" species... 1448 2.7e-148 1
TAIR|locus:2140513 - symbol:AT4G10070 "AT4G10070" species... 543 2.3e-68 2
TAIR|locus:2012713 - symbol:AT1G33680 "AT1G33680" species... 514 2.3e-67 2
UNIPROTKB|F6Y140 - symbol:KHSRP "Uncharacterized protein"... 268 1.0e-26 2
UNIPROTKB|F1SBT6 - symbol:KHSRP "Uncharacterized protein"... 274 1.1e-26 2
UNIPROTKB|F1MHR6 - symbol:LOC505564 "Uncharacterized prot... 272 1.5e-26 2
ZFIN|ZDB-GENE-040426-2159 - symbol:fubp1 "far upstream el... 293 1.6e-26 2
RGD|1591892 - symbol:Fubp1 "far upstream element (FUSE) b... 281 1.6e-26 2
UNIPROTKB|Q32PX7 - symbol:Fubp1 "Far upstream element-bin... 281 1.6e-26 2
UNIPROTKB|Q96AE4 - symbol:FUBP1 "Far upstream element-bin... 281 1.7e-26 2
UNIPROTKB|J9P014 - symbol:FUBP1 "Uncharacterized protein"... 281 1.7e-26 2
UNIPROTKB|E9PEB5 - symbol:FUBP1 "Far upstream element-bin... 281 1.8e-26 2
UNIPROTKB|B4DT31 - symbol:FUBP1 "cDNA FLJ53425, highly si... 281 2.0e-26 2
MGI|MGI:1336214 - symbol:Khsrp "KH-type splicing regulato... 273 2.3e-26 2
UNIPROTKB|E2QVT3 - symbol:KHSRP "Uncharacterized protein"... 268 2.5e-26 2
MGI|MGI:1196294 - symbol:Fubp1 "far upstream element (FUS... 279 3.0e-26 2
UNIPROTKB|Q92945 - symbol:KHSRP "Far upstream element-bin... 279 3.5e-26 2
UNIPROTKB|F1MX51 - symbol:FUBP1 "Uncharacterized protein"... 281 1.0e-25 2
UNIPROTKB|F1S9S5 - symbol:FUBP1 "Uncharacterized protein"... 281 1.5e-25 2
UNIPROTKB|E2RJQ2 - symbol:FUBP1 "Uncharacterized protein"... 281 1.8e-25 2
UNIPROTKB|Q8UVD9 - symbol:KHSRP "Far upstream element-bin... 267 2.2e-25 3
UNIPROTKB|F1S9S9 - symbol:FUBP1 "Uncharacterized protein"... 281 2.3e-25 3
RGD|621828 - symbol:Khsrp "KH-type splicing regulatory pr... 273 1.1e-24 3
UNIPROTKB|E1BX03 - symbol:FUBP1 "Uncharacterized protein"... 268 1.9e-23 2
UNIPROTKB|F1NV59 - symbol:FUBP1 "Uncharacterized protein"... 257 3.1e-22 2
UNIPROTKB|F1S0X8 - symbol:FUBP3 "Uncharacterized protein"... 254 7.0e-22 2
RGD|1307004 - symbol:Fubp3 "far upstream element (FUSE) b... 261 7.3e-22 2
UNIPROTKB|G3V829 - symbol:Fubp3 "RCG45587" species:10116 ... 261 7.3e-22 2
ZFIN|ZDB-GENE-030131-4357 - symbol:khsrp "KH-type splicin... 259 7.6e-22 2
UNIPROTKB|A6QP83 - symbol:FUBP3 "Uncharacterized protein"... 254 1.1e-21 2
ZFIN|ZDB-GENE-041121-12 - symbol:zgc:101598 "zgc:101598" ... 266 1.4e-20 2
WB|WBGene00007534 - symbol:C12D8.1 species:6239 "Caenorha... 259 2.0e-20 3
UNIPROTKB|Q17936 - symbol:C12D8.1 "Protein C12D8.1, isofo... 259 2.0e-20 3
UNIPROTKB|Q96I24 - symbol:FUBP3 "Far upstream element-bin... 240 5.6e-20 2
WB|WBGene00022738 - symbol:ZK418.9 species:6239 "Caenorha... 266 6.3e-20 1
UNIPROTKB|F1NYJ3 - symbol:FUBP3 "Uncharacterized protein"... 263 1.0e-19 1
UNIPROTKB|F1NGC0 - symbol:FUBP3 "Uncharacterized protein"... 263 1.2e-19 1
UNIPROTKB|Q7JPS0 - symbol:Psi "PSI" species:7242 "Drosoph... 223 4.2e-19 2
UNIPROTKB|J9P1I9 - symbol:FUBP3 "Uncharacterized protein"... 255 9.4e-19 2
UNIPROTKB|F1PEW1 - symbol:FUBP3 "Uncharacterized protein"... 255 1.5e-18 2
FB|FBgn0014870 - symbol:Psi "P-element somatic inhibitor"... 218 4.1e-18 2
WB|WBGene00016489 - symbol:C36E6.1 species:6239 "Caenorha... 241 1.4e-17 2
FB|FBgn0028573 - symbol:prc "pericardin" species:7227 "Dr... 213 1.6e-17 2
UNIPROTKB|G8ENL4 - symbol:FUS "Uncharacterized protein" s... 234 1.9e-16 1
ZFIN|ZDB-GENE-030131-1600 - symbol:ewsr1b "Ewing sarcoma ... 234 2.4e-16 1
ZFIN|ZDB-GENE-030131-2317 - symbol:ewsr1a "Ewing sarcoma ... 233 3.7e-16 1
UNIPROTKB|Q28009 - symbol:FUS "RNA-binding protein FUS" s... 229 6.6e-16 1
UNIPROTKB|C9JSZ1 - symbol:FUBP1 "Far upstream element-bin... 204 1.6e-15 1
MGI|MGI:1353633 - symbol:Fus "fused in sarcoma" species:1... 225 1.9e-15 1
RGD|1308864 - symbol:Fus "fused in sarcoma" species:10116... 225 1.9e-15 1
DICTYBASE|DDB_G0277909 - symbol:cbpP "calcium-binding pro... 166 2.4e-15 2
UNIPROTKB|F1PBJ4 - symbol:FUS "Uncharacterized protein" s... 219 8.6e-15 1
WB|WBGene00013347 - symbol:Y59A8B.10 species:6239 "Caenor... 198 1.9e-14 2
UNIPROTKB|Q9GRY9 - symbol:Y59A8B.10 "Protein Y59A8B.10, i... 198 1.9e-14 2
ZFIN|ZDB-GENE-040426-1010 - symbol:fus "fusion (involved ... 216 2.1e-14 1
ZFIN|ZDB-GENE-080220-35 - symbol:arid1aa "AT rich interac... 186 6.6e-14 2
FB|FBgn0038642 - symbol:Muc91C "Mucin 91C" species:7227 "... 199 1.5e-13 2
ZFIN|ZDB-GENE-041221-2 - symbol:prnpb "prion protein b" s... 149 1.7e-13 2
ZFIN|ZDB-GENE-050706-149 - symbol:zgc:110045 "zgc:110045"... 182 3.8e-13 1
UNIPROTKB|F1MA60 - symbol:Ewsr1 "Protein Ewsr1" species:1... 202 1.0e-12 1
DICTYBASE|DDB_G0269160 - symbol:nxnA "annexin VII" specie... 199 1.1e-12 1
DICTYBASE|DDB_G0277797 - symbol:sec24l "putative transpor... 204 1.4e-12 1
ZFIN|ZDB-GENE-041221-3 - symbol:prnprs3 "prion protein, r... 163 2.5e-12 2
UNIPROTKB|H9L011 - symbol:LOC426023 "Uncharacterized prot... 174 2.8e-12 1
FB|FBgn0261885 - symbol:osa "osa" species:7227 "Drosophil... 164 3.1e-12 3
UNIPROTKB|D4A6P8 - symbol:Fubp3 "Protein Fubp3" species:1... 186 3.4e-12 1
FB|FBgn0034157 - symbol:resilin "resilin" species:7227 "D... 158 3.5e-12 2
UNIPROTKB|P71590 - symbol:fhaA "FHA domain-containing pro... 168 3.7e-12 2
ZFIN|ZDB-GENE-000308-1 - symbol:igf2bp3 "insulin-like gro... 196 3.8e-12 1
WB|WBGene00001734 - symbol:grl-25 species:6239 "Caenorhab... 196 6.1e-12 1
UNIPROTKB|F1RFI8 - symbol:EWSR1 "Uncharacterized protein"... 194 6.7e-12 1
UNIPROTKB|F1PUD6 - symbol:NOVA2 "Uncharacterized protein"... 191 6.8e-12 2
UNIPROTKB|F1NPL2 - symbol:PCBP3 "Uncharacterized protein"... 187 7.2e-12 1
UNIPROTKB|F1NPL4 - symbol:PCBP3 "Uncharacterized protein"... 185 1.4e-11 1
ZFIN|ZDB-GENE-080211-1 - symbol:nova2 "neuro-oncological ... 189 1.5e-11 1
ASPGD|ASPL0000051147 - symbol:rfeF species:162425 "Emeric... 151 1.6e-11 2
UNIPROTKB|F8W0G4 - symbol:PCBP2 "Poly(rC)-binding protein... 167 1.6e-11 1
UNIPROTKB|A8E651 - symbol:EWSR1 "Uncharacterized protein"... 190 2.1e-11 1
FB|FBgn0085362 - symbol:Vml "Vitelline membrane-like" spe... 174 2.4e-11 2
UNIPROTKB|H3BRU6 - symbol:PCBP2 "Poly(rC)-binding protein... 175 2.5e-11 2
TAIR|locus:2184362 - symbol:BTR1L "AT5G04430" species:370... 185 3.1e-11 2
DICTYBASE|DDB_G0281955 - symbol:agnD "argonaut-like prote... 151 3.4e-11 2
UNIPROTKB|O73932 - symbol:igf2bp3-a "Insulin-like growth ... 192 4.1e-11 2
ASPGD|ASPL0000045500 - symbol:AN10257 species:162425 "Eme... 154 4.2e-11 2
UNIPROTKB|J9P7Y9 - symbol:PCBP1 "Uncharacterized protein"... 182 4.2e-11 1
RGD|1308032 - symbol:Nova2 "neuro-oncological ventral ant... 184 4.5e-11 2
UNIPROTKB|Q5E9A3 - symbol:PCBP1 "Poly(rC)-binding protein... 181 5.4e-11 1
UNIPROTKB|Q15365 - symbol:PCBP1 "Poly(rC)-binding protein... 181 5.4e-11 1
MGI|MGI:1345635 - symbol:Pcbp1 "poly(rC) binding protein ... 181 5.4e-11 1
RGD|1561319 - symbol:Pcbp1 "poly(rC) binding protein 1" s... 181 5.4e-11 1
UNIPROTKB|D4A458 - symbol:Ewsr1 "Protein Ewsr1" species:1... 185 6.7e-11 1
UNIPROTKB|J3QT27 - symbol:PCBP3 "Poly(rC)-binding protein... 181 7.0e-11 2
UNIPROTKB|F1NPL3 - symbol:PCBP3 "Uncharacterized protein"... 180 7.1e-11 1
UNIPROTKB|F1NP95 - symbol:NOVA1 "Uncharacterized protein"... 181 7.3e-11 2
UNIPROTKB|F1LN98 - symbol:Ewsr1 "Protein Ewsr1" species:1... 185 7.4e-11 1
UNIPROTKB|F1MS84 - symbol:NOVA2 "Uncharacterized protein"... 180 8.4e-11 2
UNIPROTKB|F1SFQ4 - symbol:PCBP2 "Uncharacterized protein"... 179 8.9e-11 1
UNIPROTKB|E2RCH9 - symbol:PCBP3 "Uncharacterized protein"... 181 8.9e-11 2
ZFIN|ZDB-GENE-060526-113 - symbol:nova1 "neuro-oncologica... 185 9.0e-11 3
UNIPROTKB|Q15366 - symbol:PCBP2 "Poly(rC)-binding protein... 179 9.9e-11 1
WARNING: Descriptions of 669 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2043530 [details] [associations]
symbol:AT2G25970 "AT2G25970" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003723 EMBL:AC004747 EMBL:AC005395
eggNOG:NOG300923 KO:K13210 HSSP:Q9UNW9 EMBL:AY078954 EMBL:AK226845
IPI:IPI00540360 PIR:T02627 RefSeq:NP_180167.1 UniGene:At.21555
ProteinModelPortal:O82762 SMR:O82762 STRING:O82762 PaxDb:O82762
PRIDE:O82762 ProMEX:O82762 EnsemblPlants:AT2G25970.1 GeneID:817137
KEGG:ath:AT2G25970 TAIR:At2g25970 HOGENOM:HOG000242545
InParanoid:O82762 OMA:AANSTQD PhylomeDB:O82762
ProtClustDB:CLSN2913011 ArrayExpress:O82762 Genevestigator:O82762
Uniprot:O82762
Length = 632
Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
Identities = 349/642 (54%), Positives = 406/642 (63%)
Query: 1 MADEPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSA-PDPAVA----------PTSYNS 49
MADE QYSSD +KRKYE+ T PP + RRPTGFS+ P P+ + P+SYNS
Sbjct: 1 MADESQYSSDTYSNKRKYEEPTAPPPST-RRPTGFSSGPIPSASVDPTAPTGLPPSSYNS 59
Query: 50 VPPPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSAD-KGFSSPPSDL 108
VPPP DE Q AK++A++IAARL NS A+AKRPRV+NG+ +D D KGFSS PS+
Sbjct: 60 VPPPMDEIQ---IAKQKAQEIAARLLNS--ADAKRPRVDNGAS-YDYGDNKGFSSYPSEG 113
Query: 109 KSIPA--PSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTR 166
K + PS+IPVSYG +Q GT+KKI+IPN+RVGVIIGK GETIKYLQLQSGAKIQVTR
Sbjct: 114 KQMSGTVPSSIPVSYGSFQ--GTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTR 171
Query: 167 DTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESG---GSGIVA-RRLTGQAGSDH 222
D +AD N TR+V+L GTP+QI+KAEQLI DVL EAE+G GSG RR+ GQAG+D
Sbjct: 172 DMDADPNCATRTVDLTGTPDQISKAEQLITDVLQEAEAGNTAGSGGGGGRRMGGQAGADQ 231
Query: 223 FAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIE 282
F MKIPNNKVGL+IGKGGETIK+MQA+TGARIQVIPLHLPPGD + ERT+QIDG +EQIE
Sbjct: 232 FVMKIPNNKVGLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIE 291
Query: 283 SAKQLVNEVIS-ENRIRNPAMAGGYSQQG-YQARPPTSWGTPGAPSMQQPGYG-YVQPGA 339
AKQLVNE+IS ENR+RN AM GGY QQG YQARPP+SW PG P Q PGYG Y+QPGA
Sbjct: 292 HAKQLVNEIISGENRMRNSAMGGGYPQQGGYQARPPSSWAPPGGPPAQ-PGYGGYMQPGA 350
Query: 340 YPGQTPQYNMSQPPYGGYPSQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 399
YPG PQY S PYG YP Q + G Y
Sbjct: 351 YPGP-PQYGQS--PYGSYPQQTSAGYYD---QSSVPPSQQSAQGEYDYYGQQQSQQPSSG 404
Query: 400 XXXXXXXXXXGYSYSQPPASGYNQQGQGYAQDSYGGYHAPQ-SGYGQAAPYDQQQGYNSA 458
GY+Y Q ASGY Q GQGY QD YG Y+A Q SGYGQAA YDQQ
Sbjct: 405 GSSAPPTDTTGYNYYQH-ASGYGQAGQGYQQDGYGAYNASQQSGYGQAAGYDQQ------ 457
Query: 459 AGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGT-GQQP----SPNTASY 513
GYG+ N SQE D++QA PP SSA GQ GYGT GQQP S A Y
Sbjct: 458 GGYGSTTNPSQEE---------DASQAAPP--SSAQSGQAGYGTTGQQPPAQGSTGQAGY 506
Query: 514 PPQGATQPSYGVPPTS--QSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYG-QTQQSPGS 570
+Q Y P + SGYG+ PP S YG Q Q P A P +YG Q+ + +
Sbjct: 507 GAPPTSQAGYSSQPAAAYNSGYGAP-PPASKPPTYGQSQ-QSPGA-PGSYGSQSGYAQPA 563
Query: 571 AGGYGQP-GYSHSQPPPS-----SYAQPDSGSQRAPPSNYGA 606
A GYGQP Y + Q P Y QP +G + + GA
Sbjct: 564 ASGYGQPPAYGYGQAPQGYGSYGGYTQPAAGGGYSSDGSAGA 605
Score = 194 (73.4 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 90/304 (29%), Positives = 109/304 (35%)
Query: 322 PGA-PSMQQPGYGYVQPGAYPGQTPQ--YNMSQPPYGGYPSQPTPGG---YPGNWDXXXX 375
PGA P P YG G+YP QT Y+ S P PSQ + G Y G
Sbjct: 348 PGAYPG--PPQYGQSPYGSYPQQTSAGYYDQSSVP----PSQQSAQGEYDYYGQQQSQQP 401
Query: 376 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGY-SYSQPPASGYNQQGQGYAQDS-Y 433
GY +Y+ SGY Q GY Q Y
Sbjct: 402 SSGGSSAPPTDTTGYNYYQHASGYGQAGQGYQQDGYGAYNASQQSGYGQAA-GYDQQGGY 460
Query: 434 GGYHAP--QSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQS 491
G P + QAAP Q + AGYG T Q+ P+ G+ G + PP
Sbjct: 461 GSTTNPSQEEDASQAAPPSSAQ--SGQAGYGT---TGQQ--PPAQGSTGQAGYGAPPTSQ 513
Query: 492 SAAMGQQG--YGTGQQPSPNTASYPPQGATQPSYGVPPT--SQSGYGSQVPPQSGYA--- 544
+ Q Y +G P + P G +Q S G P + SQSGY P SGY
Sbjct: 514 AGYSSQPAAAYNSGYGAPPPASKPPTYGQSQQSPGAPGSYGSQSGYAQ--PAASGYGQPP 571
Query: 545 --GYGM-PQAQKPLAN--PPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRA 599
GYG PQ PA G S GSAG G P S A P +G +A
Sbjct: 572 AYGYGQAPQGYGSYGGYTQPAAGGGYSSDGSAGATAGGG---GGTPASQSAAPPAGPPKA 628
Query: 600 PPSN 603
P +
Sbjct: 629 SPKS 632
>TAIR|locus:2140513 [details] [associations]
symbol:AT4G10070 "AT4G10070" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 EMBL:CP002687 GO:GO:0003723
UniGene:At.33655 IPI:IPI01020077 RefSeq:NP_192745.2
ProteinModelPortal:F4JLJ3 SMR:F4JLJ3 EnsemblPlants:AT4G10070.1
GeneID:826598 KEGG:ath:AT4G10070 OMA:PSTHAIG ArrayExpress:F4JLJ3
Uniprot:F4JLJ3
Length = 725
Score = 543 (196.2 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 124/258 (48%), Positives = 168/258 (65%)
Query: 123 GYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELM 182
G QS T+++I++P+ +VGV+IGK GETI+YLQ SGAKIQ+ RD+EAD +S R VE++
Sbjct: 172 GTQS--TTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALRPVEII 229
Query: 183 GTPEQIAKAEQLINDVLAEAESGGS-GIVARR--LTGQAG-SDHFAMKIPNNKVGLVIGK 238
G+ I AE+LI+ V+AEAE+GGS +VAR T G + +K+PN+KVGL+IG+
Sbjct: 230 GSVACIESAEKLISAVIAEAEAGGSPALVARGHPSTHAIGIPEQIEIKVPNDKVGLIIGR 289
Query: 239 GGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIR 298
GGETIKNMQ R+GAR Q+IP H GD ERTV+I G QI+ A ++ +V+++N R
Sbjct: 290 GGETIKNMQTRSGARTQLIPQHAE-GDGLKERTVRISGDKMQIDIATDMIKDVMNQNA-R 347
Query: 299 NPAMAGGYSQQGYQAR-P--PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG 355
+ +GGY+Q Y+ + P P WG+ G P P Y Y G Y Q YN P +G
Sbjct: 348 PSSYSGGYNQPAYRPQGPGGPPQWGSRG-PHAPHP-YDYHPRGPYSSQGSYYN--SPGFG 403
Query: 356 GYPSQPTP--GGYPGNWD 371
GYP Q P GGY +WD
Sbjct: 404 GYPPQHMPPRGGYGTDWD 421
Score = 169 (64.5 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 66/213 (30%), Positives = 77/213 (36%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGY---HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNT 467
+ Y P Y+ QG Y +GGY H P G G +DQ+ Y+ Y
Sbjct: 380 HPYDYHPRGPYSSQGSYYNSPGFGGYPPQHMPPRG-GYGTDWDQRPPYSGPYNYYGRQGA 438
Query: 468 SQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGAT-------- 519
G P S P P + Q YG GQ P P T
Sbjct: 439 QSAGPVPP-----PSGPVPSPAFGGPPLSQVSYGYGQSHGPEYGHAAPYSQTGYQQTYGQ 493
Query: 520 ---QPSYGVPPTSQSGYGSQVPPQSG-YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYG 575
QP Y P Q YG PP G +GY Q Q+P P YG QQ P G YG
Sbjct: 494 TYEQPKYDSNPPMQPPYGGSYPPAGGGQSGYY--QMQQPGVRP--YGM-QQGPVQQG-YG 547
Query: 576 QPGYSHSQPPP--SSYAQPDSGSQRAPPSNYGA 606
P QP SS P G+ A PS YG+
Sbjct: 548 PP-----QPAAAASSGDVPYQGATPAAPS-YGS 574
Score = 164 (62.8 bits), Expect = 7.7e-68, Sum P(2) = 7.7e-68
Identities = 65/206 (31%), Positives = 77/206 (37%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAA-GYGNVNNTSQ 469
Y QP Y Q QG Q YG + PY QG AA YG+ N Q
Sbjct: 525 YQMQQPGVRPYGMQ-QGPVQQGYGPPQPAAAASSGDVPY---QGATPAAPSYGSTNMAPQ 580
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-PSPNTA----SYPPQGATQPSYG 524
+ + G Q P SSA Y G Q P+ A S P +T G
Sbjct: 581 QQQYGYTSSDGPVQQQTYPSYSSAPPSD-AYNNGTQTPATGPAYQQQSVQPASSTYDQTG 639
Query: 525 VPPTSQSGYGSQVPPQSGYA------GYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ-P 577
+ +GYG QV P GY YG QA A P G QQ A Y P
Sbjct: 640 AQQAAAAGYGGQVAPTGGYTYPTSQPAYGS-QAAYSQAAPTQTGYEQQPATQAAVYATAP 698
Query: 578 GYS--HSQPPPSSYAQPDSGSQRAPP 601
G + +Q P S+YAQ D+ A P
Sbjct: 699 GTAPVKTQSPQSAYAQYDASQVYATP 724
Score = 159 (61.0 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 61/181 (33%), Positives = 74/181 (40%)
Query: 413 YSQPPASGYNQQGQGYAQDSYG--GYHAPQS-GYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
Y+QP Y QG G +G G HAP Y PY Q Y ++ G+G Q
Sbjct: 355 YNQP---AYRPQGPG-GPPQWGSRGPHAPHPYDYHPRGPYSSQGSYYNSPGFGGY--PPQ 408
Query: 470 EGHTPSYGAQG-DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGAT-QPSYGVPP 527
H P G G D Q PP G+QG P P PP G P++G PP
Sbjct: 409 --HMPPRGGYGTDWDQRPPYSGPYNYYGRQG-AQSAGPVP-----PPSGPVPSPAFGGPP 460
Query: 528 TSQS--GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPG-SAGGYGQPGYSHSQP 584
SQ GYG P+ G+A P +Q YGQT + P + QP Y S P
Sbjct: 461 LSQVSYGYGQSHGPEYGHAA---PYSQTGYQQ--TYGQTYEQPKYDSNPPMQPPYGGSYP 515
Query: 585 P 585
P
Sbjct: 516 P 516
Score = 155 (59.6 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 50/159 (31%), Positives = 83/159 (52%)
Query: 80 AEAKRPRVENGSGG-FDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEI--P 136
+ A RP GS +SA+K S+ ++ ++ +P+ + + ++G ++IEI P
Sbjct: 220 SSALRPVEIIGSVACIESAEKLISAVIAEAEAGGSPALVARGHPSTHAIGIPEQIEIKVP 279
Query: 137 NIRVGVIIGKSGETIKYLQLQSGAKIQ-VTRDTEADLNSPTRSVELMGTPEQIAKAEQLI 195
N +VG+IIG+ GETIK +Q +SGA+ Q + + E D R+V + G QI A +I
Sbjct: 280 NDKVGLIIGRGGETIKNMQTRSGARTQLIPQHAEGD-GLKERTVRISGDKMQIDIATDMI 338
Query: 196 NDVLAE-----AESGGSGIVARRLTGQAGSDHFAMKIPN 229
DV+ + + SGG A R G G + + P+
Sbjct: 339 KDVMNQNARPSSYSGGYNQPAYRPQGPGGPPQWGSRGPH 377
Score = 150 (57.9 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 73/219 (33%), Positives = 88/219 (40%)
Query: 416 PPASGYNQQ----GQGYAQDSYG-GY-HAPQSGYGQAAPYDQQQGYNSAAG--YGNVNNT 467
PP SG G +Q SYG G H P+ YG AAPY Q GY G Y
Sbjct: 445 PPPSGPVPSPAFGGPPLSQVSYGYGQSHGPE--YGHAAPYSQT-GYQQTYGQTYEQPKYD 501
Query: 468 SQEGHTPSYGAQ------GDS----TQAPP--PVQSSAAMGQQGYGTGQQPSP-NTASYP 514
S P YG G S Q P P QQGYG Q + ++ P
Sbjct: 502 SNPPMQPPYGGSYPPAGGGQSGYYQMQQPGVRPYGMQQGPVQQGYGPPQPAAAASSGDVP 561
Query: 515 PQGATQ--PSYG----VPPTSQSGYGSQVPP--QSGYAGYGMPQAQKPLANPPAYGQTQQ 566
QGAT PSYG P Q GY S P Q Y Y + P ++ AY Q
Sbjct: 562 YQGATPAAPSYGSTNMAPQQQQYGYTSSDGPVQQQTYPSY----SSAPPSD--AYNNGTQ 615
Query: 567 SPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
+P + Y Q QP S+Y Q +G+Q+A + YG
Sbjct: 616 TPATGPAYQQQSV---QPASSTYDQ--TGAQQAAAAGYG 649
Score = 150 (57.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 82/270 (30%), Positives = 98/270 (36%)
Query: 303 AGGYSQQGYQARPPTSWGTP---GAPSMQQPGYGYVQPGAYPGQTPQYNMSQP---PYG- 355
A YSQ GYQ ++ P P MQ P YG P A GQ+ Y M QP PYG
Sbjct: 479 AAPYSQTGYQQTYGQTYEQPKYDSNPPMQPP-YGGSYPPAGGGQSGYYQMQQPGVRPYGM 537
Query: 356 -------GY-PSQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 407
GY P QP G+
Sbjct: 538 QQGPVQQGYGPPQPAAAASSGDVPYQGATPAAPSYGSTNMAPQQQQYGYTSSDGPVQQQT 597
Query: 408 XXGYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAA-GYGN-VN 465
YS S PP+ YN G + G + QS ++ YDQ +AA GYG V
Sbjct: 598 YPSYS-SAPPSDAYNN---GTQTPATGPAYQQQSVQPASSTYDQTGAQQAAAAGYGGQVA 653
Query: 466 NTSQEGHT-----PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ 520
T G+T P+YG+Q +QA P Q GY QQP+ A Y AT
Sbjct: 654 PTG--GYTYPTSQPAYGSQAAYSQAAPT--------QTGYE--QQPATQAAVY----ATA 697
Query: 521 PSYGVPPTSQSGYGSQVPPQSGYAGYGMPQ 550
P P +QS PQS YA Y Q
Sbjct: 698 PGTA-PVKTQS-------PQSAYAQYDASQ 719
Score = 74 (31.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 49/185 (26%), Positives = 59/185 (31%)
Query: 300 PAMAGGYSQQGYQARPPT--SWGTPG-APSMQQPGYGYVQP-GAYPGQT-PQYNMSQPPY 354
PA A YQ P S+G+ AP QQ YGY G QT P Y+ S PP
Sbjct: 551 PAAAASSGDVPYQGATPAAPSYGSTNMAPQQQQ--YGYTSSDGPVQQQTYPSYS-SAPPS 607
Query: 355 GGYPS-QPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSY 413
Y + TP P GY+Y
Sbjct: 608 DAYNNGTQTPATGPA-------YQQQSVQPASSTYDQTGAQQAAAAGYGGQVAPTGGYTY 660
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
P S Q G +Q +Y Q+GY Q P Q Y +A G V S +
Sbjct: 661 ---PTS---QPAYG-SQAAYSQAAPTQTGYEQQ-PATQAAVYATAPGTAPVKTQSPQSAY 712
Query: 474 PSYGA 478
Y A
Sbjct: 713 AQYDA 717
Score = 72 (30.4 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 26/67 (38%), Positives = 32/67 (47%)
Query: 315 PPTSWGTPGAPSMQQPGYGYVQPGA---YP---GQT---PQYNMS---QPPYGG-YPSQP 361
PP S + G P YG+ P + Y GQT P+Y+ + QPPYGG YP P
Sbjct: 459 PPLSQVSYGYGQSHGPEYGHAAPYSQTGYQQTYGQTYEQPKYDSNPPMQPPYGGSYP--P 516
Query: 362 TPGGYPG 368
GG G
Sbjct: 517 AGGGQSG 523
Score = 66 (28.3 bits), Expect = 5.1e-22, Sum P(3) = 5.1e-22
Identities = 23/66 (34%), Positives = 28/66 (42%)
Query: 306 YSQQGYQAR---PPTSWGTP----GAPSMQQPGYGYVQP-GAYPGQTPQYNMS--QPPYG 355
Y +QG Q+ PP S P G P + Q YGY Q G G Y+ + Q YG
Sbjct: 433 YGRQGAQSAGPVPPPSGPVPSPAFGGPPLSQVSYGYGQSHGPEYGHAAPYSQTGYQQTYG 492
Query: 356 GYPSQP 361
QP
Sbjct: 493 QTYEQP 498
Score = 49 (22.3 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 23/82 (28%), Positives = 30/82 (36%)
Query: 298 RNPAMAGG--YSQQGYQARPPTSW---GTPGAPSMQQPGYG-----YVQPGAY---PGQT 344
R P + G Y+ G+ PP G G Q+P Y Y + GA P
Sbjct: 387 RGPYSSQGSYYNSPGFGGYPPQHMPPRGGYGTDWDQRPPYSGPYNYYGRQGAQSAGPVPP 446
Query: 345 PQYNMSQPPYGGYPSQPTPGGY 366
P + P +GG P GY
Sbjct: 447 PSGPVPSPAFGGPPLSQVSYGY 468
>TAIR|locus:2012713 [details] [associations]
symbol:AT1G33680 "AT1G33680" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF13014 PROSITE:PS50084 SMART:SM00322
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0003723
eggNOG:NOG300923 KO:K13210 UniGene:At.39892 UniGene:At.71035
HOGENOM:HOG000242545 EMBL:AK229850 EMBL:AK229909 EMBL:AK230055
IPI:IPI00786006 RefSeq:NP_174629.3 ProteinModelPortal:Q0WLY0
SMR:Q0WLY0 STRING:Q0WLY0 PaxDb:Q0WLY0 PRIDE:Q0WLY0
EnsemblPlants:AT1G33680.1 GeneID:840259 KEGG:ath:AT1G33680
TAIR:At1g33680 InParanoid:Q0WLY0 OMA:PSYGSTP PhylomeDB:Q0WLY0
ProtClustDB:CLSN2690290 Genevestigator:Q0WLY0 Uniprot:Q0WLY0
Length = 763
Score = 514 (186.0 bits), Expect = 2.3e-67, Sum P(2) = 2.3e-67
Identities = 136/383 (35%), Positives = 202/383 (52%)
Query: 1 MADEPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDF 60
+ ++ Q + D S K ED P P ++ D +V + ++ +E +D
Sbjct: 102 LIEKVQETIDAEESDNKMEDNGKPEDNQLVTPEVVTSQDVSVEESKEVNISGSQNEGED- 160
Query: 61 QAAKRRAEQIAARLCNSVSAEA----KRPRVENGSGGFDSADKGFSSPPS---DLKSIPA 113
+K + +A + + S E + E +GG G S + K +
Sbjct: 161 -DSKETNDVVAQKEVENGSKEVTDCDSQKEDEANAGGESKEVNGSVSHDEIGDESKEVNG 219
Query: 114 PSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLN 173
S QS T+++I++P+ +VG +IGK GE ++YLQ+ SGAKIQ+ RD EAD +
Sbjct: 220 GSTHK-EVDDTQS--TTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPS 276
Query: 174 SPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVG 233
S R VE++GT I KAE+LIN V+AE E+GG +A R G + +K+P++KVG
Sbjct: 277 SALRPVEIIGTVSCIEKAEKLINAVIAEVEAGGVPALAAR--GVP--EQMEIKVPSDKVG 332
Query: 234 LVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVIS 293
++IG+GGETIKNMQ ++ ARIQ+IP + GD S ERTV+I G QI+ A L+ +V+
Sbjct: 333 VIIGRGGETIKNMQTKSRARIQLIPQN--EGDASKERTVRISGDKRQIDIATALIKDVMY 390
Query: 294 ENRIRNPAMAGGYSQQGYQAR-P--PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMS 350
++ +P +GG++QQ YQ R P P WG+ G Y Y G YP Q +
Sbjct: 391 QDGRPSP-YSGGFNQQAYQPRGPGGPPQWGSRGPHGPHSMPYNYHHGGPYPSQGSHFR-- 447
Query: 351 QPPYGGYPSQPTP--GGYPGNWD 371
P GGYP Q P GY W+
Sbjct: 448 PPNSGGYPPQHMPPRSGYGSGWE 470
Score = 194 (73.4 bits), Expect = 2.3e-67, Sum P(2) = 2.3e-67
Identities = 82/216 (37%), Positives = 94/216 (43%)
Query: 410 GYSYSQP--PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAA-GYGNVNN 466
GY +P P QG A SYG A S YG + P G AA YG+ N
Sbjct: 562 GYGPPRPAAPPGDVPYQGPTPAAPSYGSTPAAAS-YG-STPAAPSYGSTPAAPSYGS--N 617
Query: 467 TSQEGHTPSYG-AQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGV 525
+Q+ YG A TQ P SSAA GY G QP +Y GA QP+ GV
Sbjct: 618 MAQQ---QQYGYASSAPTQQTYPSYSSAAPSD-GYN-GTQPPAVAPAYEQHGA-QPASGV 671
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPA-----YGQT-QQSP----GSAGGY- 574
TS GYG QVPP GY+ Y P Q N PA YG Q P G+A Y
Sbjct: 672 QQTS-GGYG-QVPPTGGYSSY--PSTQPAYGNTPAQSNGNYGYIGSQYPSYGGGNASAYA 727
Query: 575 ---GQPGYSHSQPPPSSYAQPDSGSQRAPPSNYGAA 607
GQ YS + PP + Y Q S +Q A Y AA
Sbjct: 728 APTGQTAYSQTAPPQAGYEQ--SATQSA---GYAAA 758
Score = 164 (62.8 bits), Expect = 3.4e-64, Sum P(2) = 3.4e-64
Identities = 74/218 (33%), Positives = 90/218 (41%)
Query: 410 GYSYSQ---PPASGYNQQGQGYAQDSYGGYHAPQSGYGQ----AAPYD-QQQGYNSAA-G 460
GY SQ P A G +Q Q YG + + GYG A P D QG AA
Sbjct: 529 GYGGSQQGYPSAGGQHQMQQ--PSRPYGMQGSAEQGYGPPRPAAPPGDVPYQGPTPAAPS 586
Query: 461 YGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ 520
YG+ + G TP+ + G ST A P S+ A QQ YG +P +YP +
Sbjct: 587 YGSTPAAASYGSTPAAPSYG-STPAAPSYGSNMAQQQQ-YGYASS-APTQQTYPSYSSAA 643
Query: 521 PSYGV----PPTSQSGYGSQ-VPPQSGY----AGYG-MPQAQKPLANP---PAYGQTQ-Q 566
PS G PP Y P SG GYG +P + P PAYG T Q
Sbjct: 644 PSDGYNGTQPPAVAPAYEQHGAQPASGVQQTSGGYGQVPPTGGYSSYPSTQPAYGNTPAQ 703
Query: 567 SPGSAGGYGQPGYSHSQPPPSSYAQPDSG---SQRAPP 601
S G+ G G S+ S+YA P SQ APP
Sbjct: 704 SNGNYGYIGSQYPSYGGGNASAYAAPTGQTAYSQTAPP 741
Score = 161 (61.7 bits), Expect = 7.0e-64, Sum P(2) = 7.0e-64
Identities = 60/178 (33%), Positives = 74/178 (41%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQ---GYNSAAGYGNVNNTS 468
SY PA+ G A SYG A Q YG A+ QQ Y+SAA N T
Sbjct: 595 SYGSTPAAP--SYGSTPAAPSYGSNMAQQQQYGYASSAPTQQTYPSYSSAAPSDGYNGTQ 652
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
P+Y G Q VQ ++ GYG P+ +SYP +TQP+YG P
Sbjct: 653 PPAVAPAYEQHG--AQPASGVQQTSG----GYGQ-VPPTGGYSSYP---STQPAYGNTPA 702
Query: 529 SQSG-YG---SQVPPQSG--YAGYGMPQAQKPLAN--PPAYGQTQQSPGSAGGYGQPG 578
+G YG SQ P G + Y P Q + PP G Q + SAG PG
Sbjct: 703 QSNGNYGYIGSQYPSYGGGNASAYAAPTGQTAYSQTAPPQAGYEQSATQSAGYAAAPG 760
Score = 156 (60.0 bits), Expect = 2.4e-63, Sum P(2) = 2.4e-63
Identities = 68/221 (30%), Positives = 87/221 (39%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY---HAP-QSGYGQ--------AAPYD---QQQGYNS 457
Y+ Y QG + + GGY H P +SGYG + PYD +Q G N
Sbjct: 431 YNYHHGGPYPSQGSHFRPPNSGGYPPQHMPPRSGYGSGWEQRPPHSGPYDYYGRQGGQNP 490
Query: 458 AAGYGNVNNTSQEGHTPSYGAQGDSTQA--PPPVQSSAAMG--QQGYGT--GQ-QPSPNT 510
+ + SQ G +YG D PP QS G QQGY + GQ Q +
Sbjct: 491 GPVPSHGASYSQAGAQQTYGQMYDQPHYDNPPMHQSYGGYGGSQQGYPSAGGQHQMQQPS 550
Query: 511 ASYPPQGATQPSYGVP-PTSQSGYGSQVPPQSGYAGYGM-PQAQKPLANP--PAYGQTQQ 566
Y QG+ + YG P P + G P YG P A + P P+YG T
Sbjct: 551 RPYGMQGSAEQGYGPPRPAAPPGDVPYQGPTPAAPSYGSTPAAASYGSTPAAPSYGSTPA 610
Query: 567 SPGSAGGYGQP---GYSHSQPPPSSYAQPDSGSQRAPPSNY 604
+P Q GY+ S P +Y P S S AP Y
Sbjct: 611 APSYGSNMAQQQQYGYASSAPTQQTY--P-SYSSAAPSDGY 648
Score = 154 (59.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 77/276 (27%), Positives = 97/276 (35%)
Query: 276 GTSEQIESAKQLVNEVISENRIRNPAMA---GGY--SQQGY-QARPPTSWGTPGAP-SMQ 328
G S A+Q ++ + NP M GGY SQQGY A P P MQ
Sbjct: 497 GASYSQAGAQQTYGQMYDQPHYDNPPMHQSYGGYGGSQQGYPSAGGQHQMQQPSRPYGMQ 556
Query: 329 ---QPGYGYVQPGAYPGQTPQYNMSQ--PPYGGYPSQPTPGGYPG--NWDXXXXXXXXXX 381
+ GYG +P A PG P + P YG P+ + G P ++
Sbjct: 557 GSAEQGYGPPRPAAPPGDVPYQGPTPAAPSYGSTPAAASYGSTPAAPSYGSTPAAPSYGS 616
Query: 382 XXXXXXXXXXXXXXXXXXX--XXXXXXXXXGYSYSQPPA--SGYNQQGQGYAQDSYGGYH 437
GY+ +QPPA Y Q G AQ + G
Sbjct: 617 NMAQQQQYGYASSAPTQQTYPSYSSAAPSDGYNGTQPPAVAPAYEQHG---AQPA-SGVQ 672
Query: 438 APQSGYGQAAPYDQQQGYNSAA-GYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMG 496
GYGQ P Y S YGN S G+ G+Q S +A G
Sbjct: 673 QTSGGYGQVPPTGGYSSYPSTQPAYGNTPAQSN-GNYGYIGSQYPSYGGGNASAYAAPTG 731
Query: 497 QQGYGTGQQPSPNTASYPPQGATQPS-YGVPP-TSQ 530
Q Y Q +P A Y Q ATQ + Y P T+Q
Sbjct: 732 QTAYS---QTAPPQAGYE-QSATQSAGYAAAPGTAQ 763
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 64/206 (31%), Positives = 78/206 (37%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSG----YG-QAAPYDQQQG--YNSAAGYGNVNNTS 468
P + G+NQQ Y GG PQ G +G + PY+ G Y S + N+
Sbjct: 397 PYSGGFNQQA--YQPRGPGG--PPQWGSRGPHGPHSMPYNYHHGGPYPSQGSHFRPPNSG 452
Query: 469 --QEGHTPSYGAQGDS-TQAPPPVQSSAAMGQQGYGTGQQPSP---NTASYPPQGATQPS 522
H P G Q PP G+QG GQ P P + ASY GA Q +
Sbjct: 453 GYPPQHMPPRSGYGSGWEQRPPHSGPYDYYGRQG---GQNPGPVPSHGASYSQAGAQQ-T 508
Query: 523 YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHS 582
YG Q Y + P Y GYG Q P A Q P G + GY
Sbjct: 509 YG-QMYDQPHYDNP-PMHQSYGGYGGSQQGYPSAGGQHQMQQPSRPYGMQGSAEQGYGPP 566
Query: 583 QP--PPSSYAQPDSGSQRAPPSNYGA 606
+P PP P G A PS YG+
Sbjct: 567 RPAAPPGDV--PYQGPTPAAPS-YGS 589
Score = 68 (29.0 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 25/73 (34%), Positives = 32/73 (43%)
Query: 305 GYSQQGYQARPPTS--WGTPGAPSMQQPG----YG--YVQPGAYPGQTPQYNMSQPPYGG 356
GY G++ RPP S + G Q PG +G Y Q GA Y+ QP Y
Sbjct: 464 GYGS-GWEQRPPHSGPYDYYGRQGGQNPGPVPSHGASYSQAGAQQTYGQMYD--QPHYDN 520
Query: 357 YPSQPTPGGYPGN 369
P + GGY G+
Sbjct: 521 PPMHQSYGGYGGS 533
Score = 50 (22.7 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 22/64 (34%), Positives = 27/64 (42%)
Query: 306 YSQQGYQARPPT-SWGTPGAPSMQQPGYG--YVQPGAYPGQTPQYNMSQPPYGG-YPSQP 361
Y +QG Q P S G + + Q YG Y QP Y P + S YGG P
Sbjct: 482 YGRQGGQNPGPVPSHGASYSQAGAQQTYGQMYDQPH-Y--DNPPMHQSYGGYGGSQQGYP 538
Query: 362 TPGG 365
+ GG
Sbjct: 539 SAGG 542
>UNIPROTKB|F6Y140 [details] [associations]
symbol:KHSRP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
OMA:QASGNCH GeneTree:ENSGT00650000093048 EMBL:AAEX03012495
Ensembl:ENSCAFT00000029641 Uniprot:F6Y140
Length = 602
Score = 268 (99.4 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 90/266 (33%), Positives = 124/266 (46%)
Query: 121 YGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE 180
YG +G + +P VGV+IG+SGE IK +Q +G +IQ +D D P +
Sbjct: 173 YGS--RIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD---DGTGPEKIAH 227
Query: 181 LMGTPEQIAKAEQLINDVLAEAESG------GSGIV--AR-RLTGQAG----SDHFAMKI 227
+MG P++ A ++IND+L SG G G+ R R GQ I
Sbjct: 228 IMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSI 287
Query: 228 PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPP-GDTSTERTVQIDGTSEQIESAKQ 286
P +K GLVIG+GGE +K + +TGA ++ I LPP GD + + + I G+ +QI+ AKQ
Sbjct: 288 PTHKCGLVIGRGGENVKAINQQTGAFVE-ISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQ 345
Query: 287 LVNEVISENRIRNPAMAGGYSQQGYQA--RP-PTSWGTPGAPSMQQPGYGYVQPGAYP-- 341
L+ E I GG G P P + G PGAP P G P YP
Sbjct: 346 LIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAP----PHAGGPPPHQYPPQ 401
Query: 342 GQTPQYNMSQPPYGGYPSQPTPGGYP 367
G Y QPP P++ P
Sbjct: 402 GWGNTYPQWQPPAPHDPNKAAAAADP 427
Score = 249 (92.7 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 57/166 (34%), Positives = 97/166 (58%)
Query: 130 SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIA 189
+++ +P+ VG+IIG+ GE I +Q SG K+Q++ D+ P RSV L G PE +
Sbjct: 2 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGG---LPERSVSLTGAPESVQ 58
Query: 190 KAEQLINDVLAEAESGGSGIVARRLTG-QAGSDHFAMKIPNNKVGLVIGKGGETIKNMQA 248
KA+ +++D+++ G G G Q G+ M IP K GLVIGKGGETIK +Q
Sbjct: 59 KAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQE 117
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
R G +++I + +T+ ++ ++I G +++ A ++V +++ E
Sbjct: 118 RAG--VKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 161
Score = 247 (92.0 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 64/199 (32%), Positives = 104/199 (52%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
GT ++I IP + G++IGK GETIK LQ ++G K+ + +D + N + + ++G P +
Sbjct: 89 GTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVD-KPLRIIGDPYK 147
Query: 188 IAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQ 247
+ +A +++ D+L E + GG G R G + +P + VG+VIG+ GE IK +Q
Sbjct: 148 VQQACEMVMDILRERDQGGFG--DRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQ 205
Query: 248 ARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYS 307
G RIQ G T E+ I G ++ E A +++N+++ R P GG
Sbjct: 206 NDAGVRIQ---FKQDDG-TGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPG 261
Query: 308 QQ--GY-QARPPTSWGTPG 323
G + R +WG PG
Sbjct: 262 MPPGGRGRGRGQGNWGPPG 280
Score = 129 (50.5 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
++P+ VGL+IG+GGE I +Q +G ++Q+ P G ER+V + G E ++ AK
Sbjct: 6 RVPDGMVGLIIGRGGEQINKIQQDSGCKVQISP---DSGGLP-ERSVSLTGAPESVQKAK 61
Query: 286 QLVNEVISENR 296
++++++S R
Sbjct: 62 MMLDDIVSRGR 72
Score = 110 (43.8 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 96 SADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQ 155
S G PP P G + G IP + G++IG+ GE +K +
Sbjct: 248 SLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAIN 307
Query: 156 LQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLIND 197
Q+GA ++++R + + + + G+P+QI A+QLI +
Sbjct: 308 QQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEE 349
Score = 108 (43.1 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 57/195 (29%), Positives = 71/195 (36%)
Query: 416 PPASGYNQQGQG--YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
PP Y QG G Y Q H P A P Y S Y G
Sbjct: 393 PPPHQYPPQGWGNTYPQWQPPAPHDPNKAAAAADPNAAWAAYYSH--YYQQPPGPVPGPA 450
Query: 474 PSYGA---QGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQGATQPSYGVPPT 528
P+ A QG+ Q PP QS + Y GQQP A PPQ ++
Sbjct: 451 PAPAAPPAQGEPPQPPPAGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAW----- 503
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ-PGYSHSQPPPS 587
+ Y Q +G G G P +P + A+ + + A YGQ PG QPPP+
Sbjct: 504 -EEYYKKQAQVATG-GGPGAPPGSQPDYSA-AWAEYYRQ--QAAYYGQTPGPGGPQPPPT 558
Query: 588 SYAQPD-SGSQRAPP 601
Q SG+ PP
Sbjct: 559 QQGQQQASGNCHPPP 573
Score = 95 (38.5 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 41/127 (32%), Positives = 48/127 (37%)
Query: 478 AQGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQG----ATQPSYGVPPTSQS 531
AQG+ Q PP QS + Y GQQP A PPQ A + Y +
Sbjct: 458 AQGEPPQPPPAGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAWEEYYKKQAQVAT 515
Query: 532 GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQ-----QSPGSAGGYGQP-GYSHSQPP 585
G G PP S Y A+ YGQT Q P + G Q G H PP
Sbjct: 516 GGGPGAPPGS-QPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQASGNCHPPPP 574
Query: 586 PSSYAQP 592
P S+ P
Sbjct: 575 PFSFQPP 581
Score = 78 (32.5 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 30/105 (28%), Positives = 37/105 (35%)
Query: 503 GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYG 562
G P+ + P Q G PP + Q PPQ G+ G PQ Q P + P
Sbjct: 364 GPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQ-GW-GNTYPQWQPPAPHDPNKA 421
Query: 563 QTQQSPGSAGG------YGQPGYSHSQPPPSSYAQPDSGSQRAPP 601
P +A Y QP P P+ A P G PP
Sbjct: 422 AAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPP 466
Score = 75 (31.5 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 22/48 (45%), Positives = 23/48 (47%)
Query: 312 QARPPTSWGTPGAPSMQQPGYG------YVQPGAYPGQTPQYNMSQPP 353
QA+ T G PGAP QP Y Y Q AY GQTP QPP
Sbjct: 510 QAQVATGGG-PGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPP 556
Score = 69 (29.3 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 21/62 (33%), Positives = 25/62 (40%)
Query: 313 ARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG---YPGN 369
A P +W + QQP PG PG P + PP G P QP P G Y
Sbjct: 425 ADPNAAWAAYYSHYYQQP------PGPVPGPAPA--PAAPPAQGEPPQPPPAGQSDYTKA 476
Query: 370 WD 371
W+
Sbjct: 477 WE 478
Score = 69 (29.3 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 39/129 (30%), Positives = 49/129 (37%)
Query: 415 QPPASGYNQQGQGYAQDSYGGYHAPQS----GYGQAAPYDQQQGYNSA-AGYGNVNNTSQ 469
QP G Q Q Y + ++ Y+ Q+ G G AP Q Y++A A Y +
Sbjct: 487 QPQQPGAPPQ-QDYTK-AWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYR-QQAAY 543
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
G TP G PPP Q GQQ Q S N PP + QP V P
Sbjct: 544 YGQTPGPGGP-----QPPPTQQ----GQQ------QASGNCHPPPPPFSFQPPATVHPAL 588
Query: 530 QSGYGSQVP 538
G+ P
Sbjct: 589 VGSAGNPFP 597
Score = 47 (21.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 17/71 (23%), Positives = 23/71 (32%)
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
G P G P G G P A PP + Q G+ QP H
Sbjct: 359 GPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDP 418
Query: 584 PPPSSYAQPDS 594
++ A P++
Sbjct: 419 NKAAAAADPNA 429
>UNIPROTKB|F1SBT6 [details] [associations]
symbol:KHSRP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010494 "cytoplasmic stress granule" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
InterPro:IPR015096 Pfam:PF09005 OMA:QASGNCH
GeneTree:ENSGT00650000093048 EMBL:CU929921
Ensembl:ENSSSCT00000014785 Uniprot:F1SBT6
Length = 747
Score = 274 (101.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 84/279 (30%), Positives = 131/279 (46%)
Query: 24 PPSAAARRPTGFSAPDPAVAPTSYNSVPP----PADEFQDFQAAKRRAEQIAARLCNSVS 79
PP R G P S PP P F A +RA QIAA++ +
Sbjct: 34 PPGRXDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAA 93
Query: 80 AEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGG-YQSMGTS--KKIEIP 136
+ G GG + P S K +I G + TS ++ +P
Sbjct: 94 TTVNNSTPDFGFGGQKRQLEDGDQPESK-KLASQGDSISSQLGPIHPPPRTSMTEEYRVP 152
Query: 137 NIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLIN 196
+ VG+IIG+ GE I +Q SG K+Q++ D+ P RSV L G PE + KA+ +++
Sbjct: 153 DGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGG---LPERSVSLTGAPESVQKAKMMLD 209
Query: 197 DVLAEAESGGSGIVARRLTG-QAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
D+++ G G G Q G+ M IP K GLVIGKGGETIK +Q R G ++
Sbjct: 210 DIVSRGRGGPPGQFHDNANGGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQERAG--VK 266
Query: 256 VIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
+I + +T+ ++ ++I G +++ A ++V +++ E
Sbjct: 267 MILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 305
Score = 266 (98.7 bits), Expect = 8.9e-26, Sum P(2) = 8.9e-26
Identities = 88/252 (34%), Positives = 120/252 (47%)
Query: 121 YGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE 180
YG +G + +P VGV+IG+SGE IK +Q +G +IQ +D D P +
Sbjct: 317 YGS--RIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD---DGTGPEKIAH 371
Query: 181 LMGTPEQIAKAEQLINDVLAEAESG------GSGIV--AR-RLTGQAG----SDHFAMKI 227
+MG P++ A ++IND+L SG G G+ R R GQ I
Sbjct: 372 IMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSI 431
Query: 228 PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPP-GDTSTERTVQIDGTSEQIESAKQ 286
P +K GLVIG+GGE +K + +TGA ++ I LPP GD + + + I G+ +QI+ AKQ
Sbjct: 432 PTHKCGLVIGRGGENVKAINQQTGAFVE-ISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQ 489
Query: 287 LVNEVISENRIRNPAMAGGYSQQGYQA--RP-PTSWGTPGAPSMQQPGYGYVQPGAYP-- 341
L+ E I GG G P P + G PGAP P G P YP
Sbjct: 490 LIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAP----PHAGGPPPHQYPPQ 545
Query: 342 GQTPQYNMSQPP 353
G Y QPP
Sbjct: 546 GWGNTYPQWQPP 557
Score = 247 (92.0 bits), Expect = 9.7e-23, Sum P(3) = 9.7e-23
Identities = 64/199 (32%), Positives = 104/199 (52%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
GT ++I IP + G++IGK GETIK LQ ++G K+ + +D + N + + ++G P +
Sbjct: 233 GTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVD-KPLRIIGDPYK 291
Query: 188 IAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQ 247
+ +A +++ D+L E + GG G R G + +P + VG+VIG+ GE IK +Q
Sbjct: 292 VQQACEMVMDILRERDQGGFG--DRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQ 349
Query: 248 ARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYS 307
G RIQ G T E+ I G ++ E A +++N+++ R P GG
Sbjct: 350 NDAGVRIQ---FKQDDG-TGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPG 405
Query: 308 QQ--GY-QARPPTSWGTPG 323
G + R +WG PG
Sbjct: 406 MPPGGRGRGRGQGNWGPPG 424
Score = 129 (50.5 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
++P+ VGL+IG+GGE I +Q +G ++Q+ P G ER+V + G E ++ AK
Sbjct: 150 RVPDGMVGLIIGRGGEQINKIQQDSGCKVQISP---DSGGLP-ERSVSLTGAPESVQKAK 205
Query: 286 QLVNEVISENR 296
++++++S R
Sbjct: 206 MMLDDIVSRGR 216
Score = 110 (43.8 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 96 SADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQ 155
S G PP P G + G IP + G++IG+ GE +K +
Sbjct: 392 SLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAIN 451
Query: 156 LQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLIND 197
Q+GA ++++R + + + + G+P+QI A+QLI +
Sbjct: 452 QQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEE 493
Score = 105 (42.0 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 58/196 (29%), Positives = 72/196 (36%)
Query: 416 PPASGYNQQGQG--YAQDSYGGYHAPQSGYGQAA-PYDQQQGYNSAAGYGNVNNTSQEGH 472
PP Y QG G Y Q H P AA P Y S Y G
Sbjct: 537 PPPHQYPPQGWGNTYPQWQPPAPHDPNKAAAAAADPNAAWAAYYSH--YYQQPPGPVPGP 594
Query: 473 TPSYGA---QGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQGATQPSYGVPP 527
P+ A QG+ Q PP QS + Y GQQP A PPQ ++
Sbjct: 595 APAPAAPPTQGEPPQPPPAGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAW---- 648
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ-PGYSHSQPPP 586
+ Y Q +G G G P +P + A+ + + A YGQ PG QPPP
Sbjct: 649 --EEYYKKQAQVATG-GGPGAPPGSQPDYSA-AWAEYYRQ--QAAYYGQTPGPGGPQPPP 702
Query: 587 SSYAQPD-SGSQRAPP 601
+ Q SG+ PP
Sbjct: 703 TQQGQQQASGNCHPPP 718
Score = 91 (37.1 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 40/126 (31%), Positives = 47/126 (37%)
Query: 479 QGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQG----ATQPSYGVPPTSQSG 532
QG+ Q PP QS + Y GQQP A PPQ A + Y +G
Sbjct: 604 QGEPPQPPPAGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAWEEYYKKQAQVATG 661
Query: 533 YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQ-----QSPGSAGGYGQP-GYSHSQPPP 586
G PP S Y A+ YGQT Q P + G Q G H PPP
Sbjct: 662 GGPGAPPGS-QPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQASGNCHPPPPP 720
Query: 587 SSYAQP 592
S+ P
Sbjct: 721 FSFQPP 726
Score = 75 (31.5 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 22/48 (45%), Positives = 23/48 (47%)
Query: 312 QARPPTSWGTPGAPSMQQPGYG------YVQPGAYPGQTPQYNMSQPP 353
QA+ T G PGAP QP Y Y Q AY GQTP QPP
Sbjct: 655 QAQVATGGG-PGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPP 701
Score = 72 (30.4 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 28/106 (26%), Positives = 38/106 (35%)
Query: 503 GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYG 562
G P+ + P Q G PP + Q PPQ G+ G PQ Q P + P
Sbjct: 508 GPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQ-GW-GNTYPQWQPPAPHDPNKA 565
Query: 563 QTQQSPGSAGGYGQPGYSHSQPP-------PSSYAQPDSGSQRAPP 601
+ +A + + QPP P+ A P G PP
Sbjct: 566 AAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPTQGEPPQPP 611
Score = 69 (29.3 bits), Expect = 7.5e-26, Sum P(3) = 7.5e-26
Identities = 21/62 (33%), Positives = 25/62 (40%)
Query: 313 ARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG---YPGN 369
A P +W + QQP PG PG P + PP G P QP P G Y
Sbjct: 570 ADPNAAWAAYYSHYYQQP------PGPVPGPAPA--PAAPPTQGEPPQPPPAGQSDYTKA 621
Query: 370 WD 371
W+
Sbjct: 622 WE 623
Score = 69 (29.3 bits), Expect = 7.5e-26, Sum P(3) = 7.5e-26
Identities = 39/129 (30%), Positives = 49/129 (37%)
Query: 415 QPPASGYNQQGQGYAQDSYGGYHAPQS----GYGQAAPYDQQQGYNSA-AGYGNVNNTSQ 469
QP G Q Q Y + ++ Y+ Q+ G G AP Q Y++A A Y +
Sbjct: 632 QPQQPGAPPQ-QDYTK-AWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYR-QQAAY 688
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
G TP G PPP Q GQQ Q S N PP + QP V P
Sbjct: 689 YGQTPGPGGP-----QPPPTQQ----GQQ------QASGNCHPPPPPFSFQPPATVHPAL 733
Query: 530 QSGYGSQVP 538
G+ P
Sbjct: 734 VGSAGNPFP 742
Score = 44 (20.5 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 19/81 (23%), Positives = 26/81 (32%)
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
G P G P G G P A PP + Q G+ QP H
Sbjct: 503 GPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDP 562
Query: 584 PPPSSYAQPDSGSQRAPPSNY 604
++ A + + A S+Y
Sbjct: 563 NKAAAAAADPNAAWAAYYSHY 583
>UNIPROTKB|F1MHR6 [details] [associations]
symbol:LOC505564 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0010494 "cytoplasmic stress granule" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
InterPro:IPR015096 Pfam:PF09005 OMA:QASGNCH
GeneTree:ENSGT00650000093048 EMBL:DAAA02019565 EMBL:DAAA02019566
IPI:IPI00701919 Ensembl:ENSBTAT00000027991 Uniprot:F1MHR6
Length = 708
Score = 272 (100.8 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 81/272 (29%), Positives = 132/272 (48%)
Query: 28 AARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRPRV 87
A R G SA P+ P P F A +RA QIAA++ +
Sbjct: 7 AGGRAGGXSAGGPSQPPGGGG----PGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTP 62
Query: 88 ENGSGG----FDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVI 143
+ G GG + D+ S + + P+ SM +++ +P+ VG+I
Sbjct: 63 DFGFGGQKRQLEDGDQPESKKLASQGDSMSSQLGPIHPPPRTSM--TEEYRVPDGMVGLI 120
Query: 144 IGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAE 203
IG+ GE I +Q SG K+Q++ D+ P RSV L G PE + KA+ +++D+++
Sbjct: 121 IGRGGEQINKIQQDSGCKVQISPDSGG---LPERSVSLTGAPESVQKAKMMLDDIVSRGR 177
Query: 204 SGGSGIVARRLTG-QAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLP 262
G G G Q G+ M IP K GLVIGKGGETIK +Q R G +++I +
Sbjct: 178 GGPPGQFHDNANGGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQERAG--VKMILIQDG 234
Query: 263 PGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
+T+ ++ ++I G +++ A ++V +++ E
Sbjct: 235 SQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 266
Score = 266 (98.7 bits), Expect = 7.2e-26, Sum P(2) = 7.2e-26
Identities = 88/252 (34%), Positives = 120/252 (47%)
Query: 121 YGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE 180
YG +G + +P VGV+IG+SGE IK +Q +G +IQ +D D P +
Sbjct: 278 YGS--RIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD---DGTGPEKIAH 332
Query: 181 LMGTPEQIAKAEQLINDVLAEAESG------GSGIV--AR-RLTGQAG----SDHFAMKI 227
+MG P++ A ++IND+L SG G G+ R R GQ I
Sbjct: 333 IMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSI 392
Query: 228 PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPP-GDTSTERTVQIDGTSEQIESAKQ 286
P +K GLVIG+GGE +K + +TGA ++ I LPP GD + + + I G+ +QI+ AKQ
Sbjct: 393 PTHKCGLVIGRGGENVKAINQQTGAFVE-ISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQ 450
Query: 287 LVNEVISENRIRNPAMAGGYSQQGYQA--RP-PTSWGTPGAPSMQQPGYGYVQPGAYP-- 341
L+ E I GG G P P + G PGAP P G P YP
Sbjct: 451 LIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAP----PHAGGPPPHQYPPQ 506
Query: 342 GQTPQYNMSQPP 353
G Y QPP
Sbjct: 507 GWGNTYPQWQPP 518
Score = 247 (92.0 bits), Expect = 7.2e-23, Sum P(3) = 7.2e-23
Identities = 64/199 (32%), Positives = 104/199 (52%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
GT ++I IP + G++IGK GETIK LQ ++G K+ + +D + N + + ++G P +
Sbjct: 194 GTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVD-KPLRIIGDPYK 252
Query: 188 IAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQ 247
+ +A +++ D+L E + GG G R G + +P + VG+VIG+ GE IK +Q
Sbjct: 253 VQQACEMVMDILRERDQGGFG--DRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQ 310
Query: 248 ARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYS 307
G RIQ G T E+ I G ++ E A +++N+++ R P GG
Sbjct: 311 NDAGVRIQ---FKQDDG-TGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPG 366
Query: 308 QQ--GY-QARPPTSWGTPG 323
G + R +WG PG
Sbjct: 367 MPPGGRGRGRGQGNWGPPG 385
Score = 129 (50.5 bits), Expect = 9.5e-10, Sum P(3) = 9.5e-10
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
++P+ VGL+IG+GGE I +Q +G ++Q+ P G ER+V + G E ++ AK
Sbjct: 111 RVPDGMVGLIIGRGGEQINKIQQDSGCKVQISP---DSGGLP-ERSVSLTGAPESVQKAK 166
Query: 286 QLVNEVISENR 296
++++++S R
Sbjct: 167 MMLDDIVSRGR 177
Score = 110 (43.8 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 96 SADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQ 155
S G PP P G + G IP + G++IG+ GE +K +
Sbjct: 353 SLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAIN 412
Query: 156 LQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLIND 197
Q+GA ++++R + + + + G+P+QI A+QLI +
Sbjct: 413 QQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEE 454
Score = 105 (42.0 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 58/196 (29%), Positives = 72/196 (36%)
Query: 416 PPASGYNQQGQG--YAQDSYGGYHAPQSGYGQAA-PYDQQQGYNSAAGYGNVNNTSQEGH 472
PP Y QG G Y Q H P AA P Y S Y G
Sbjct: 498 PPPHQYPPQGWGNTYPQWQPPAPHDPNKAAAAAADPNAAWAAYYSH--YYQQPPGPVPGP 555
Query: 473 TPSYGA---QGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQGATQPSYGVPP 527
P+ A QG+ Q PP QS + Y GQQP A PPQ ++
Sbjct: 556 APAPAAPPTQGEPPQPPPAGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAW---- 609
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ-PGYSHSQPPP 586
+ Y Q +G G G P +P + A+ + + A YGQ PG QPPP
Sbjct: 610 --EEYYKKQAQVATG-GGPGAPPGSQPDYSA-AWAEYYRQ--QAAYYGQTPGPGGPQPPP 663
Query: 587 SSYAQPD-SGSQRAPP 601
+ Q SG+ PP
Sbjct: 664 TQQGQQQASGNCHPPP 679
Score = 91 (37.1 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 40/126 (31%), Positives = 47/126 (37%)
Query: 479 QGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQG----ATQPSYGVPPTSQSG 532
QG+ Q PP QS + Y GQQP A PPQ A + Y +G
Sbjct: 565 QGEPPQPPPAGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAWEEYYKKQAQVATG 622
Query: 533 YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQ-----QSPGSAGGYGQP-GYSHSQPPP 586
G PP S Y A+ YGQT Q P + G Q G H PPP
Sbjct: 623 GGPGAPPGS-QPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQASGNCHPPPPP 681
Query: 587 SSYAQP 592
S+ P
Sbjct: 682 FSFQPP 687
Score = 75 (31.5 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 22/48 (45%), Positives = 23/48 (47%)
Query: 312 QARPPTSWGTPGAPSMQQPGYG------YVQPGAYPGQTPQYNMSQPP 353
QA+ T G PGAP QP Y Y Q AY GQTP QPP
Sbjct: 616 QAQVATGGG-PGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPP 662
Score = 72 (30.4 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 28/106 (26%), Positives = 38/106 (35%)
Query: 503 GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYG 562
G P+ + P Q G PP + Q PPQ G+ G PQ Q P + P
Sbjct: 469 GPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQ-GW-GNTYPQWQPPAPHDPNKA 526
Query: 563 QTQQSPGSAGGYGQPGYSHSQPP-------PSSYAQPDSGSQRAPP 601
+ +A + + QPP P+ A P G PP
Sbjct: 527 AAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPTQGEPPQPP 572
Score = 69 (29.3 bits), Expect = 9.4e-26, Sum P(3) = 9.4e-26
Identities = 21/62 (33%), Positives = 25/62 (40%)
Query: 313 ARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG---YPGN 369
A P +W + QQP PG PG P + PP G P QP P G Y
Sbjct: 531 ADPNAAWAAYYSHYYQQP------PGPVPGPAPA--PAAPPTQGEPPQPPPAGQSDYTKA 582
Query: 370 WD 371
W+
Sbjct: 583 WE 584
Score = 69 (29.3 bits), Expect = 9.4e-26, Sum P(3) = 9.4e-26
Identities = 39/129 (30%), Positives = 49/129 (37%)
Query: 415 QPPASGYNQQGQGYAQDSYGGYHAPQS----GYGQAAPYDQQQGYNSA-AGYGNVNNTSQ 469
QP G Q Q Y + ++ Y+ Q+ G G AP Q Y++A A Y +
Sbjct: 593 QPQQPGAPPQ-QDYTK-AWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYR-QQAAY 649
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
G TP G PPP Q GQQ Q S N PP + QP V P
Sbjct: 650 YGQTPGPGGP-----QPPPTQQ----GQQ------QASGNCHPPPPPFSFQPPATVHPAL 694
Query: 530 QSGYGSQVP 538
G+ P
Sbjct: 695 VGSAGNPFP 703
Score = 44 (20.5 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 19/81 (23%), Positives = 26/81 (32%)
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
G P G P G G P A PP + Q G+ QP H
Sbjct: 464 GPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDP 523
Query: 584 PPPSSYAQPDSGSQRAPPSNY 604
++ A + + A S+Y
Sbjct: 524 NKAAAAAADPNAAWAAYYSHY 544
>ZFIN|ZDB-GENE-040426-2159 [details] [associations]
symbol:fubp1 "far upstream element (FUSE) binding
protein 1" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-040426-2159 GO:GO:0003723 CTD:8880 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210 OrthoDB:EOG4STS4G
InterPro:IPR015096 Pfam:PF09005 GeneTree:ENSGT00650000093048
OMA:NGQEGDQ EMBL:CT027589 EMBL:BC064649 IPI:IPI00484709
RefSeq:NP_998309.1 UniGene:Dr.76240 SMR:Q6P2A9
Ensembl:ENSDART00000081442 Ensembl:ENSDART00000128153 GeneID:406418
KEGG:dre:406418 InParanoid:Q6P2A9 NextBio:20818020 Uniprot:Q6P2A9
Length = 642
Score = 293 (108.2 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 90/263 (34%), Positives = 137/263 (52%)
Query: 42 VAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRPR-VEN--GSGGFDSAD 98
VAP S N+ D F+D A +RA QIAA+ + + P V N G GG
Sbjct: 7 VAPPSSNAGGGMNDAFKD---ALQRARQIAAK----IGGDGVPPSPVSNDFGYGGQKRPL 59
Query: 99 KGFSSPPSDLKSIPA--P-SAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQ 155
+ P + K +P P SA+ GG S++ ++P+ VG IIG+ GE I LQ
Sbjct: 60 EDGDQP--ETKKVPPSDPFSAVMGGMGG-PPRSVSEEFKVPDGMVGFIIGRGGEQISRLQ 116
Query: 156 LQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLT 215
+SG KIQ+ D+ P RSV L G+P+ I A++L+++++ E G
Sbjct: 117 QESGCKIQIAPDSGG---MPDRSVTLTGSPDAIMTAKRLLSEIV---EKGRPSPAFHHND 170
Query: 216 GQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQID 275
G S H M IP +K GLVIGKGGETIK +Q R G ++++ + P +T ++ ++I
Sbjct: 171 GPGMSVH-EMMIPASKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLRIS 227
Query: 276 GTSEQIESAKQLVNEVISENRIR 298
G +++ AK +V ++I + R
Sbjct: 228 GDPFKVQQAKDMVMDLIRDQGFR 250
Score = 250 (93.1 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 84/264 (31%), Positives = 116/264 (43%)
Query: 122 GGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEAD-------LNS 174
GG G S + +P VG++IG+SGE IK +Q +G +IQ D + +
Sbjct: 261 GGGGGGGESLDVPVPRFAVGIVIGRSGEMIKKIQNDTGVRIQFKPDDGSTPERIAQIMGP 320
Query: 175 PTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQA--------GSDHFAMK 226
P R+ + ++ Q GG G R GQ G F
Sbjct: 321 PDRAQHAADIITDLLRSVQAGGPPGHGGGGGGGGGGRGRGRGQGNWNMGPPGGLQEFTFT 380
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
+P K GL+IGKGGETIKN+ ++GARI+ + + PP + + G+ +QI+ A+Q
Sbjct: 381 VPTMKTGLIIGKGGETIKNISQQSGARIE-LQRNPPPNSDPNIKIFTVRGSPQQIDYARQ 439
Query: 287 LVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQ 346
LV E I + +P M G + G P S G PG P G PG Y GQ P
Sbjct: 440 LVEEKIG-GPV-SP-MGGPHGPPGPHGGP--SHGPPGPQGPPAP-MGPYNPGPY-GQGPP 492
Query: 347 YNMSQPPYGGYPSQPTPGGYPGNW 370
PP Y Q GYP +W
Sbjct: 493 -GPHGPP-APYQPQGWGNGYP-HW 513
Score = 80 (33.2 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 41/144 (28%), Positives = 54/144 (37%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAG---YGNVNNTSQEGH 472
PPA Y QG G + Y + Q +P N+AA Y Q
Sbjct: 497 PPAP-YQPQGWG---NGYPHWQQGQPDPTVCSPDKAAADANAAAWAAYYSQYQQQPQGPM 552
Query: 473 TPSYGAQGDSTQAP-----PPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPP 527
TP+ A G +TQA P Q ++ Y Q +P A+ ATQP G P
Sbjct: 553 TPTSAAPG-TTQANGQGQGQPQQDYTKAWEEYYKKQGQAAPQAAAAAT--ATQP--GGQP 607
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQA 551
+ + Q+ Y G G PQA
Sbjct: 608 DYSAAWAEYYRQQAAYYGQGAPQA 631
Score = 74 (31.1 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 41/149 (27%), Positives = 51/149 (34%)
Query: 434 GGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSA 493
G Y+ G G P+ Y G+GN Q+G D A ++A
Sbjct: 480 GPYNPGPYGQGPPGPHGPPAPYQPQ-GWGNGYPHWQQGQPDPTVCSPDKAAA----DANA 534
Query: 494 AMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGY--AGYGMPQA 551
A Y QQ PQG P+ P T+Q+ Q PQ Y A +
Sbjct: 535 AAWAAYYSQYQQQ--------PQGPMTPTSAAPGTTQANGQGQGQPQQDYTKAWEEYYKK 586
Query: 552 QKPLANPPAYGQTQQSPGSAGGYGQPGYS 580
Q A A T PG GQP YS
Sbjct: 587 QGQAAPQAAAAATATQPG-----GQPDYS 610
Score = 71 (30.1 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 37/115 (32%), Positives = 43/115 (37%)
Query: 507 SPNTASYPPQGATQPSYGVPPTSQSGYGSQVPP-QSGYAGYGMPQAQKPLA-----NPPA 560
SP Y Q + G P S G G PP G +G P Q P A NP
Sbjct: 430 SPQQIDYARQLVEEKIGG--PVSPMG-GPHGPPGPHGGPSHGPPGPQGPPAPMGPYNPGP 486
Query: 561 YGQTQQSP-GSAGGYGQP-----GYSH---SQPPPSSYAQPDSGSQRAPPSNYGA 606
YGQ P G Y QP GY H QP P+ PD + A + + A
Sbjct: 487 YGQGPPGPHGPPAPY-QPQGWGNGYPHWQQGQPDPT-VCSPDKAAADANAAAWAA 539
Score = 58 (25.5 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 28/104 (26%), Positives = 36/104 (34%)
Query: 433 YGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS----YGAQGDST-QAPP 487
Y Y Q G P G A G G Q+ +T + Y QG + QA
Sbjct: 541 YSQYQ--QQPQGPMTPTSAAPGTTQANGQGQ--GQPQQDYTKAWEEYYKKQGQAAPQAAA 596
Query: 488 PVQSSAAMGQQGYGTG-QQPSPNTASYPPQGATQPSYGVPPTSQ 530
++ GQ Y + A+Y QGA Q G P Q
Sbjct: 597 AATATQPGGQPDYSAAWAEYYRQQAAYYGQGAPQAMGGAPQAQQ 640
Score = 58 (25.5 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 28/110 (25%), Positives = 37/110 (33%)
Query: 496 GQQGYGTGQQPSPNTASYP-PQGATQPS-YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQK 553
G G G P P P P G P YG P G + PQ G+ G G P Q+
Sbjct: 460 GPHG-GPSHGP-PGPQGPPAPMGPYNPGPYGQGPPGPHGPPAPYQPQ-GW-GNGYPHWQQ 515
Query: 554 PLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSN 603
+P + + + YS Q P P S + +N
Sbjct: 516 GQPDPTVCSPDKAAADANAAAWAAYYSQYQQQPQGPMTPTSAAPGTTQAN 565
Score = 50 (22.7 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 21/62 (33%), Positives = 26/62 (41%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG 365
Y +QG QA P + A + QPG G QP Y +Y Q Y G + GG
Sbjct: 584 YKKQG-QAAPQAA----AAATATQPG-G--QPD-YSAAWAEYYRQQAAYYGQGAPQAMGG 634
Query: 366 YP 367
P
Sbjct: 635 AP 636
Score = 50 (22.7 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 23/73 (31%), Positives = 27/73 (36%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGA-YPGQTPQYNMSQ----PPY 354
A A YSQ Q + P + T AP Q G G QP Y +Y Q P
Sbjct: 536 AWAAYYSQYQQQPQGPMT-PTSAAPGTTQANGQGQGQPQQDYTKAWEEYYKKQGQAAPQA 594
Query: 355 GGYPSQPTPGGYP 367
+ PGG P
Sbjct: 595 AAAATATQPGGQP 607
Score = 41 (19.5 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 482 STQAPPPVQSSAAMGQQGYGTGQ-QPSPNTASYPPQGATQPSYGVPPTSQSG 532
S QA P G G G G+ + N PP G + ++ VP T ++G
Sbjct: 337 SVQAGGPPGHGGGGGGGGGGRGRGRGQGNWNMGPPGGLQEFTFTVP-TMKTG 387
>RGD|1591892 [details] [associations]
symbol:Fubp1 "far upstream element (FUSE) binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 RGD:1591892
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003723 CTD:8880 eggNOG:NOG300923 HOVERGEN:HBG000625
KO:K13210 InterPro:IPR015096 Pfam:PF09005 EMBL:BC107942
IPI:IPI00373591 RefSeq:NP_001032742.1 UniGene:Rn.177078
ProteinModelPortal:Q32PX7 SMR:Q32PX7 STRING:Q32PX7
PhosphoSite:Q32PX7 PRIDE:Q32PX7 GeneID:654496 KEGG:rno:654496
NextBio:714902 Genevestigator:Q32PX7 Uniprot:Q32PX7
Length = 639
Score = 281 (104.0 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 86/253 (33%), Positives = 121/253 (47%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 275 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPDRIAQITGPPDRCQHAA 331
Query: 193 QLINDVLAEAESG---GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLVIGKGG 240
++I D+L ++G G G R R GQ G F +P K GL+IGKGG
Sbjct: 332 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 391
Query: 241 ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE--NRIR 298
ETIK++ ++GARI+ + + PP + I GT +QI+ A+QL+ E I N +
Sbjct: 392 ETIKSISQQSGARIE-LQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 450
Query: 299 NPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P G + G P P GTP P P Y PG PG P PP Y
Sbjct: 451 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAP---Y-NPGP-PGPAPH----GPP-APY 500
Query: 358 PSQPTPGGYPGNW 370
Q YP +W
Sbjct: 501 APQGWGNAYP-HW 512
Score = 263 (97.6 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 82/263 (31%), Positives = 133/263 (50%)
Query: 47 YNSVPPPADE---------FQD-FQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDS 96
Y++VPPP+ D F+ A +RA QIAA++ + G GG
Sbjct: 4 YSTVPPPSSGSAGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSN--DYGYGGQKR 61
Query: 97 ADKGFSSPPSDLKSIPAPS-----AIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETI 151
+ P D K +P + +P + +S+ T ++ ++P+ VG IIG+ GE I
Sbjct: 62 PLEDGDQP--DAKKVPPQNDSFGAQLPPMHQQQRSVMT-EEYKVPDGMVGFIIGRGGEQI 118
Query: 152 KYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVA 211
+Q +SG KIQ+ D+ P RS L GTPE + A++L+ D + E G
Sbjct: 119 SRIQQESGCKIQIAPDSGG---LPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPGFHH 174
Query: 212 RRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERT 271
G A + + IP +K GLVIGKGGETIK +Q R G ++++ + P +T ++
Sbjct: 175 GDGPGNAVQE---IMIPASKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKP 229
Query: 272 VQIDGTSEQIESAKQLVNEVISE 294
++I G +++ AK++V E+I +
Sbjct: 230 LRITGDPYKVQQAKEMVLELIRD 252
Score = 217 (81.4 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 59/215 (27%), Positives = 112/215 (52%)
Query: 131 KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAK 190
++I IP + G++IGK GETIK LQ ++G K+ + +D + + + + + G P ++ +
Sbjct: 183 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQQ 241
Query: 191 AEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 242 AKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 299
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
G RIQ P T+ +R QI G ++ + A +++ +++ + NP G +
Sbjct: 300 AGVRIQF----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPG-GPGPGGR 354
Query: 310 GYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
G + R +W G PG +Q+ + ++ P G
Sbjct: 355 G-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 384
Score = 136 (52.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT E ++SAK
Sbjct: 101 KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGTPESVQSAK 156
Query: 286 QLVNEVISENR 296
+L+++++ + R
Sbjct: 157 RLLDQIVEKGR 167
Score = 93 (37.8 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 49/165 (29%), Positives = 62/165 (37%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ QQQ A G + N+ + +
Sbjct: 481 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAH 538
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTAS-----------YPPQGATQPS-Y 523
Y Q Q PP + A Q G G Q +P A Y G P+
Sbjct: 539 YYQQ--QAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPA 596
Query: 524 GVPPTSQSGYGSQ----VPPQSGYAGYGMPQAQKPLANPPA-YGQ 563
G PP Q Y + Q+ Y PQ P +PPA GQ
Sbjct: 597 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGM-P-QHPPAPQGQ 639
Score = 76 (31.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 33/115 (28%), Positives = 43/115 (37%)
Query: 487 PPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVP--PQSG 542
PPV G G +G P P T P G P+ Y P + +G P PQ
Sbjct: 451 PPVPHGPH-GVPGPHGPPGPPGPGT----PMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 505
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Y Q Q P +P G S A Y +QPPP++ A + +Q
Sbjct: 506 GNAYPHWQQQAP-PDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQ 559
Score = 75 (31.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 48/187 (25%), Positives = 65/187 (34%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDST-------QAPP 487
G H P G P YN A + G Y QG QAPP
Sbjct: 462 GPHGPPGPPGPGTPMGP---YNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPP 518
Query: 488 -PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS-GYGSQV-PPQSGYA 544
P ++ + + PP A P+ G P T+Q+ G G Q P +G
Sbjct: 519 DPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAA--PA-GAPTTTQTNGQGDQQNPAPAGQV 575
Query: 545 GYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-----HSQPPPSSYAQPD-SGSQR 598
Y +A + GQ +P A GQP YS + + + YAQ G +
Sbjct: 576 DY--TKAWEEYYKK--MGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQ 631
Query: 599 APPSNYG 605
PP+ G
Sbjct: 632 HPPAPQG 638
Score = 63 (27.2 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 39/122 (31%), Positives = 48/122 (39%)
Query: 472 HTPSYGAQGDSTQAPP-PVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPS 522
H P +G G PP P MG Y G P+P+ A Y PQG P
Sbjct: 455 HGP-HGVPGP--HGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPH 511
Query: 523 YG--VPPT-SQSGYGSQVPPQSGY-AGYGMPQAQKPLANP---PAYGQT-----QQSPGS 570
+ PP +++G + Y A Y QAQ P A P P QT QQ+P
Sbjct: 512 WQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAP 571
Query: 571 AG 572
AG
Sbjct: 572 AG 573
Score = 57 (25.1 bits), Expect = 5.7e-21, Sum P(3) = 5.7e-21
Identities = 24/65 (36%), Positives = 28/65 (43%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ--PT 362
Y QQ QA+PP + GAP+ Q G G Q A GQ Y + Y Q P
Sbjct: 539 YYQQ--QAQPPPA-APAGAPTTTQTNGQGDQQNPAPAGQV-DYTKAWEEYYKKMGQAVPA 594
Query: 363 PGGYP 367
P G P
Sbjct: 595 PAGAP 599
Score = 56 (24.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 23/74 (31%), Positives = 30/74 (40%)
Query: 298 RNPAMAG--GYSQ--QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQP 352
+NPA AG Y++ + Y + + P GAP QP Y Y Q Y + P
Sbjct: 567 QNPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSP 626
Query: 353 PYGGYPSQP-TPGG 365
G P P P G
Sbjct: 627 Q--GMPQHPPAPQG 638
Score = 42 (19.8 bits), Expect = 5.7e-21, Sum P(3) = 5.7e-21
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQ 445
YS A Y QQ YAQ S G P + GQ
Sbjct: 606 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 639
>UNIPROTKB|Q32PX7 [details] [associations]
symbol:Fubp1 "Far upstream element-binding protein 1"
species:10116 "Rattus norvegicus" [GO:0010628 "positive regulation
of gene expression" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
RGD:1591892 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003723 CTD:8880 eggNOG:NOG300923 HOVERGEN:HBG000625
KO:K13210 InterPro:IPR015096 Pfam:PF09005 EMBL:BC107942
IPI:IPI00373591 RefSeq:NP_001032742.1 UniGene:Rn.177078
ProteinModelPortal:Q32PX7 SMR:Q32PX7 STRING:Q32PX7
PhosphoSite:Q32PX7 PRIDE:Q32PX7 GeneID:654496 KEGG:rno:654496
NextBio:714902 Genevestigator:Q32PX7 Uniprot:Q32PX7
Length = 639
Score = 281 (104.0 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 86/253 (33%), Positives = 121/253 (47%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 275 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPDRIAQITGPPDRCQHAA 331
Query: 193 QLINDVLAEAESG---GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLVIGKGG 240
++I D+L ++G G G R R GQ G F +P K GL+IGKGG
Sbjct: 332 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 391
Query: 241 ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE--NRIR 298
ETIK++ ++GARI+ + + PP + I GT +QI+ A+QL+ E I N +
Sbjct: 392 ETIKSISQQSGARIE-LQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 450
Query: 299 NPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P G + G P P GTP P P Y PG PG P PP Y
Sbjct: 451 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAP---Y-NPGP-PGPAPH----GPP-APY 500
Query: 358 PSQPTPGGYPGNW 370
Q YP +W
Sbjct: 501 APQGWGNAYP-HW 512
Score = 263 (97.6 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 82/263 (31%), Positives = 133/263 (50%)
Query: 47 YNSVPPPADE---------FQD-FQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDS 96
Y++VPPP+ D F+ A +RA QIAA++ + G GG
Sbjct: 4 YSTVPPPSSGSAGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSN--DYGYGGQKR 61
Query: 97 ADKGFSSPPSDLKSIPAPS-----AIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETI 151
+ P D K +P + +P + +S+ T ++ ++P+ VG IIG+ GE I
Sbjct: 62 PLEDGDQP--DAKKVPPQNDSFGAQLPPMHQQQRSVMT-EEYKVPDGMVGFIIGRGGEQI 118
Query: 152 KYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVA 211
+Q +SG KIQ+ D+ P RS L GTPE + A++L+ D + E G
Sbjct: 119 SRIQQESGCKIQIAPDSGG---LPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPGFHH 174
Query: 212 RRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERT 271
G A + + IP +K GLVIGKGGETIK +Q R G ++++ + P +T ++
Sbjct: 175 GDGPGNAVQE---IMIPASKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKP 229
Query: 272 VQIDGTSEQIESAKQLVNEVISE 294
++I G +++ AK++V E+I +
Sbjct: 230 LRITGDPYKVQQAKEMVLELIRD 252
Score = 217 (81.4 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 59/215 (27%), Positives = 112/215 (52%)
Query: 131 KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAK 190
++I IP + G++IGK GETIK LQ ++G K+ + +D + + + + + G P ++ +
Sbjct: 183 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQQ 241
Query: 191 AEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 242 AKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 299
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
G RIQ P T+ +R QI G ++ + A +++ +++ + NP G +
Sbjct: 300 AGVRIQF----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPG-GPGPGGR 354
Query: 310 GYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
G + R +W G PG +Q+ + ++ P G
Sbjct: 355 G-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 384
Score = 136 (52.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT E ++SAK
Sbjct: 101 KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGTPESVQSAK 156
Query: 286 QLVNEVISENR 296
+L+++++ + R
Sbjct: 157 RLLDQIVEKGR 167
Score = 93 (37.8 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 49/165 (29%), Positives = 62/165 (37%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ QQQ A G + N+ + +
Sbjct: 481 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAH 538
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTAS-----------YPPQGATQPS-Y 523
Y Q Q PP + A Q G G Q +P A Y G P+
Sbjct: 539 YYQQ--QAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPA 596
Query: 524 GVPPTSQSGYGSQ----VPPQSGYAGYGMPQAQKPLANPPA-YGQ 563
G PP Q Y + Q+ Y PQ P +PPA GQ
Sbjct: 597 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGM-P-QHPPAPQGQ 639
Score = 76 (31.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 33/115 (28%), Positives = 43/115 (37%)
Query: 487 PPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVP--PQSG 542
PPV G G +G P P T P G P+ Y P + +G P PQ
Sbjct: 451 PPVPHGPH-GVPGPHGPPGPPGPGT----PMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 505
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Y Q Q P +P G S A Y +QPPP++ A + +Q
Sbjct: 506 GNAYPHWQQQAP-PDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQ 559
Score = 75 (31.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 48/187 (25%), Positives = 65/187 (34%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDST-------QAPP 487
G H P G P YN A + G Y QG QAPP
Sbjct: 462 GPHGPPGPPGPGTPMGP---YNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPP 518
Query: 488 -PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS-GYGSQV-PPQSGYA 544
P ++ + + PP A P+ G P T+Q+ G G Q P +G
Sbjct: 519 DPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAA--PA-GAPTTTQTNGQGDQQNPAPAGQV 575
Query: 545 GYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-----HSQPPPSSYAQPD-SGSQR 598
Y +A + GQ +P A GQP YS + + + YAQ G +
Sbjct: 576 DY--TKAWEEYYKK--MGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQ 631
Query: 599 APPSNYG 605
PP+ G
Sbjct: 632 HPPAPQG 638
Score = 63 (27.2 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 39/122 (31%), Positives = 48/122 (39%)
Query: 472 HTPSYGAQGDSTQAPP-PVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPS 522
H P +G G PP P MG Y G P+P+ A Y PQG P
Sbjct: 455 HGP-HGVPGP--HGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPH 511
Query: 523 YG--VPPT-SQSGYGSQVPPQSGY-AGYGMPQAQKPLANP---PAYGQT-----QQSPGS 570
+ PP +++G + Y A Y QAQ P A P P QT QQ+P
Sbjct: 512 WQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAP 571
Query: 571 AG 572
AG
Sbjct: 572 AG 573
Score = 57 (25.1 bits), Expect = 5.7e-21, Sum P(3) = 5.7e-21
Identities = 24/65 (36%), Positives = 28/65 (43%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ--PT 362
Y QQ QA+PP + GAP+ Q G G Q A GQ Y + Y Q P
Sbjct: 539 YYQQ--QAQPPPA-APAGAPTTTQTNGQGDQQNPAPAGQV-DYTKAWEEYYKKMGQAVPA 594
Query: 363 PGGYP 367
P G P
Sbjct: 595 PAGAP 599
Score = 56 (24.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 23/74 (31%), Positives = 30/74 (40%)
Query: 298 RNPAMAG--GYSQ--QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQP 352
+NPA AG Y++ + Y + + P GAP QP Y Y Q Y + P
Sbjct: 567 QNPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSP 626
Query: 353 PYGGYPSQP-TPGG 365
G P P P G
Sbjct: 627 Q--GMPQHPPAPQG 638
Score = 42 (19.8 bits), Expect = 5.7e-21, Sum P(3) = 5.7e-21
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQ 445
YS A Y QQ YAQ S G P + GQ
Sbjct: 606 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 639
>UNIPROTKB|Q96AE4 [details] [associations]
symbol:FUBP1 "Far upstream element-binding protein 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010628 "positive
regulation of gene expression" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0003700 GO:GO:0003723
GO:GO:0006366 GO:GO:0003697 GO:GO:0010628 EMBL:U05040 EMBL:AC096948
EMBL:BC017247 IPI:IPI00375441 IPI:IPI00853059 PIR:A53184
RefSeq:NP_003893.2 UniGene:Hs.567380 PDB:1J4W PDB:2KXH PDBsum:1J4W
PDBsum:2KXH ProteinModelPortal:Q96AE4 SMR:Q96AE4 DIP:DIP-47273N
IntAct:Q96AE4 MINT:MINT-1374324 STRING:Q96AE4 PhosphoSite:Q96AE4
DMDM:116241370 REPRODUCTION-2DPAGE:IPI00375441 PaxDb:Q96AE4
PRIDE:Q96AE4 DNASU:8880 Ensembl:ENST00000294623
Ensembl:ENST00000370768 GeneID:8880 KEGG:hsa:8880 UCSC:uc001dii.3
CTD:8880 GeneCards:GC01M078400 HGNC:HGNC:4004 HPA:HPA006149
MIM:603444 neXtProt:NX_Q96AE4 PharmGKB:PA28420 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210 OrthoDB:EOG4STS4G
ChiTaRS:FUBP1 EvolutionaryTrace:Q96AE4 GenomeRNAi:8880
NextBio:33343 ArrayExpress:Q96AE4 Bgee:Q96AE4 CleanEx:HS_FUBP1
Genevestigator:Q96AE4 GermOnline:ENSG00000162613 InterPro:IPR015096
Pfam:PF09005 Uniprot:Q96AE4
Length = 644
Score = 281 (104.0 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 86/253 (33%), Positives = 121/253 (47%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPERIAQITGPPDRCQHAA 336
Query: 193 QLINDVLAEAESG---GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLVIGKGG 240
++I D+L ++G G G R R GQ G F +P K GL+IGKGG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 241 ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE--NRIR 298
ETIK++ ++GARI+ + + PP + I GT +QI+ A+QL+ E I N +
Sbjct: 397 ETIKSISQQSGARIE-LQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 455
Query: 299 NPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P G + G P P GTP P P Y PG PG P PP Y
Sbjct: 456 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAP---Y-NPGP-PGPAPH----GPP-APY 505
Query: 358 PSQPTPGGYPGNW 370
Q YP +W
Sbjct: 506 APQGWGNAYP-HW 517
Score = 252 (93.8 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 79/245 (32%), Positives = 126/245 (51%)
Query: 60 FQAAKRRAEQIAARLCNSVSAEA----------KRPRVENGSGGFDSADKGFSSPPSDLK 109
F+ A +RA QIAA++ KRP +E+G D D +P +D
Sbjct: 31 FKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRP-LEDG----DQPDAKKVAPQNDSF 85
Query: 110 SIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTE 169
P P+ +S+ T ++ ++P+ VG IIG+ GE I +Q +SG KIQ+ D+
Sbjct: 86 GTQLP---PMHQQQSRSVMT-EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG 141
Query: 170 ADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPN 229
P RS L GTPE + A++L+ D + E G G A + + IP
Sbjct: 142 G---LPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPGFHHGDGPGNAVQE---IMIPA 194
Query: 230 NKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVN 289
+K GLVIGKGGETIK +Q R G ++++ + P +T ++ ++I G +++ AK++V
Sbjct: 195 SKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVL 252
Query: 290 EVISE 294
E+I +
Sbjct: 253 ELIRD 257
Score = 220 (82.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 60/215 (27%), Positives = 112/215 (52%)
Query: 131 KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAK 190
++I IP + G++IGK GETIK LQ ++G K+ + +D + + + + + G P ++ +
Sbjct: 188 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQQ 246
Query: 191 AEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 247 AKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 304
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
G RIQ P T+ ER QI G ++ + A +++ +++ + NP G +
Sbjct: 305 AGVRIQF----KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPG-GPGPGGR 359
Query: 310 GYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
G + R +W G PG +Q+ + ++ P G
Sbjct: 360 G-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 389
Score = 136 (52.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT E ++SAK
Sbjct: 106 KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGTPESVQSAK 161
Query: 286 QLVNEVISENR 296
+L+++++ + R
Sbjct: 162 RLLDQIVEKGR 172
Score = 93 (37.8 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 49/165 (29%), Positives = 62/165 (37%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ QQQ A G + N+ + +
Sbjct: 486 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAH 543
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTAS-----------YPPQGATQPS-Y 523
Y Q Q PP + A Q G G Q +P A Y G P+
Sbjct: 544 YYQQ--QAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPT 601
Query: 524 GVPPTSQSGYGSQ----VPPQSGYAGYGMPQAQKPLANPPA-YGQ 563
G PP Q Y + Q+ Y PQ P +PPA GQ
Sbjct: 602 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGM-P-QHPPAPQGQ 644
Score = 76 (31.8 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 33/115 (28%), Positives = 43/115 (37%)
Query: 487 PPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVP--PQSG 542
PPV G G +G P P T P G P+ Y P + +G P PQ
Sbjct: 456 PPVPHGPH-GVPGPHGPPGPPGPGT----PMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 510
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Y Q Q P +P G S A Y +QPPP++ A + +Q
Sbjct: 511 GNAYPHWQQQAP-PDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQ 564
Score = 73 (30.8 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 48/187 (25%), Positives = 65/187 (34%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDST-------QAPP 487
G H P G P YN A + G Y QG QAPP
Sbjct: 467 GPHGPPGPPGPGTPMGP---YNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPP 523
Query: 488 -PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS-GYGSQV-PPQSGYA 544
P ++ + + PP A P+ G P T+Q+ G G Q P +G
Sbjct: 524 DPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAA--PA-GAPTTTQTNGQGDQQNPAPAGQV 580
Query: 545 GYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-----HSQPPPSSYAQPD-SGSQR 598
Y +A + GQ +P A GQP YS + + + YAQ G +
Sbjct: 581 DY--TKAWEEYYKK--MGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQ 636
Query: 599 APPSNYG 605
PP+ G
Sbjct: 637 HPPAPQG 643
Score = 63 (27.2 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 39/122 (31%), Positives = 48/122 (39%)
Query: 472 HTPSYGAQGDSTQAPP-PVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPS 522
H P +G G PP P MG Y G P+P+ A Y PQG P
Sbjct: 460 HGP-HGVPGP--HGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPH 516
Query: 523 YG--VPPT-SQSGYGSQVPPQSGY-AGYGMPQAQKPLANP---PAYGQT-----QQSPGS 570
+ PP +++G + Y A Y QAQ P A P P QT QQ+P
Sbjct: 517 WQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAP 576
Query: 571 AG 572
AG
Sbjct: 577 AG 578
Score = 56 (24.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 23/74 (31%), Positives = 30/74 (40%)
Query: 298 RNPAMAG--GYSQ--QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQP 352
+NPA AG Y++ + Y + + P GAP QP Y Y Q Y + P
Sbjct: 572 QNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSP 631
Query: 353 PYGGYPSQP-TPGG 365
G P P P G
Sbjct: 632 Q--GMPQHPPAPQG 643
Score = 55 (24.4 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 24/65 (36%), Positives = 28/65 (43%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ--PT 362
Y QQ QA+PP + GAP+ Q G G Q A GQ Y + Y Q P
Sbjct: 544 YYQQ--QAQPPPA-APAGAPTTTQTNGQGDQQNPAPAGQV-DYTKAWEEYYKKMGQAVPA 599
Query: 363 PGGYP 367
P G P
Sbjct: 600 PTGAP 604
Score = 42 (19.8 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQ 445
YS A Y QQ YAQ S G P + GQ
Sbjct: 611 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 644
>UNIPROTKB|J9P014 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 EMBL:AAEX03004886
Ensembl:ENSCAFT00000046408 Uniprot:J9P014
Length = 644
Score = 281 (104.0 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 86/253 (33%), Positives = 121/253 (47%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPDRIAQITGPPDRCQHAA 336
Query: 193 QLINDVLAEAESG---GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLVIGKGG 240
++I D+L ++G G G R R GQ G F +P K GL+IGKGG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 241 ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE--NRIR 298
ETIK++ ++GARI+ + + PP + I GT +QI+ A+QL+ E I N +
Sbjct: 397 ETIKSISQQSGARIE-LQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 455
Query: 299 NPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P G + G P P GTP P P Y PG PG P PP Y
Sbjct: 456 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAP---Y-NPGP-PGPAPH----GPP-APY 505
Query: 358 PSQPTPGGYPGNW 370
Q YP +W
Sbjct: 506 APQGWGNAYP-HW 517
Score = 252 (93.8 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 79/245 (32%), Positives = 126/245 (51%)
Query: 60 FQAAKRRAEQIAARLCNSVSAEA----------KRPRVENGSGGFDSADKGFSSPPSDLK 109
F+ A +RA QIAA++ KRP +E+G D D +P +D
Sbjct: 31 FKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRP-LEDG----DQPDAKKVAPQNDSF 85
Query: 110 SIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTE 169
P P+ +S+ T ++ ++P+ VG IIG+ GE I +Q +SG KIQ+ D+
Sbjct: 86 GTQLP---PMHQQQSRSVMT-EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG 141
Query: 170 ADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPN 229
P RS L GTPE + A++L+ D + E G G A + + IP
Sbjct: 142 G---LPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPGFHHGDGPGNAVQE---IMIPA 194
Query: 230 NKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVN 289
+K GLVIGKGGETIK +Q R G ++++ + P +T ++ ++I G +++ AK++V
Sbjct: 195 SKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVL 252
Query: 290 EVISE 294
E+I +
Sbjct: 253 ELIRD 257
Score = 217 (81.4 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 59/215 (27%), Positives = 112/215 (52%)
Query: 131 KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAK 190
++I IP + G++IGK GETIK LQ ++G K+ + +D + + + + + G P ++ +
Sbjct: 188 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQQ 246
Query: 191 AEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 247 AKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 304
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
G RIQ P T+ +R QI G ++ + A +++ +++ + NP G +
Sbjct: 305 AGVRIQF----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPG-GPGPGGR 359
Query: 310 GYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
G + R +W G PG +Q+ + ++ P G
Sbjct: 360 G-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 389
Score = 136 (52.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT E ++SAK
Sbjct: 106 KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGTPESVQSAK 161
Query: 286 QLVNEVISENR 296
+L+++++ + R
Sbjct: 162 RLLDQIVEKGR 172
Score = 93 (37.8 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 49/165 (29%), Positives = 62/165 (37%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ QQQ A G + N+ + +
Sbjct: 486 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAH 543
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTAS-----------YPPQGATQPS-Y 523
Y Q Q PP + A Q G G Q +P A Y G P+
Sbjct: 544 YYQQ--QAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPT 601
Query: 524 GVPPTSQSGYGSQ----VPPQSGYAGYGMPQAQKPLANPPA-YGQ 563
G PP Q Y + Q+ Y PQ P +PPA GQ
Sbjct: 602 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGM-P-QHPPAPQGQ 644
Score = 76 (31.8 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 33/115 (28%), Positives = 43/115 (37%)
Query: 487 PPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVP--PQSG 542
PPV G G +G P P T P G P+ Y P + +G P PQ
Sbjct: 456 PPVPHGPH-GVPGPHGPPGPPGPGT----PMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 510
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Y Q Q P +P G S A Y +QPPP++ A + +Q
Sbjct: 511 GNAYPHWQQQAP-PDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQ 564
Score = 73 (30.8 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 48/187 (25%), Positives = 65/187 (34%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDST-------QAPP 487
G H P G P YN A + G Y QG QAPP
Sbjct: 467 GPHGPPGPPGPGTPMGP---YNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPP 523
Query: 488 -PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS-GYGSQV-PPQSGYA 544
P ++ + + PP A P+ G P T+Q+ G G Q P +G
Sbjct: 524 DPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAA--PA-GAPTTTQTNGQGDQQNPAPAGQV 580
Query: 545 GYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-----HSQPPPSSYAQPD-SGSQR 598
Y +A + GQ +P A GQP YS + + + YAQ G +
Sbjct: 581 DY--TKAWEEYYKK--MGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQ 636
Query: 599 APPSNYG 605
PP+ G
Sbjct: 637 HPPAPQG 643
Score = 63 (27.2 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 39/122 (31%), Positives = 48/122 (39%)
Query: 472 HTPSYGAQGDSTQAPP-PVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPS 522
H P +G G PP P MG Y G P+P+ A Y PQG P
Sbjct: 460 HGP-HGVPGP--HGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPH 516
Query: 523 YG--VPPT-SQSGYGSQVPPQSGY-AGYGMPQAQKPLANP---PAYGQT-----QQSPGS 570
+ PP +++G + Y A Y QAQ P A P P QT QQ+P
Sbjct: 517 WQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAP 576
Query: 571 AG 572
AG
Sbjct: 577 AG 578
Score = 56 (24.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 23/74 (31%), Positives = 30/74 (40%)
Query: 298 RNPAMAG--GYSQ--QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQP 352
+NPA AG Y++ + Y + + P GAP QP Y Y Q Y + P
Sbjct: 572 QNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSP 631
Query: 353 PYGGYPSQP-TPGG 365
G P P P G
Sbjct: 632 Q--GMPQHPPAPQG 643
Score = 55 (24.4 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 24/65 (36%), Positives = 28/65 (43%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ--PT 362
Y QQ QA+PP + GAP+ Q G G Q A GQ Y + Y Q P
Sbjct: 544 YYQQ--QAQPPPA-APAGAPTTTQTNGQGDQQNPAPAGQV-DYTKAWEEYYKKMGQAVPA 599
Query: 363 PGGYP 367
P G P
Sbjct: 600 PTGAP 604
Score = 42 (19.8 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQ 445
YS A Y QQ YAQ S G P + GQ
Sbjct: 611 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 644
>UNIPROTKB|E9PEB5 [details] [associations]
symbol:FUBP1 "Far upstream element-binding protein 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
EMBL:AC096948 HGNC:HGNC:4004 ChiTaRS:FUBP1 InterPro:IPR015096
Pfam:PF09005 IPI:IPI00644386 ProteinModelPortal:E9PEB5 SMR:E9PEB5
PRIDE:E9PEB5 Ensembl:ENST00000370767 ArrayExpress:E9PEB5
Bgee:E9PEB5 Uniprot:E9PEB5
Length = 655
Score = 281 (104.0 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 86/253 (33%), Positives = 121/253 (47%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPERIAQITGPPDRCQHAA 336
Query: 193 QLINDVLAEAESG---GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLVIGKGG 240
++I D+L ++G G G R R GQ G F +P K GL+IGKGG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 241 ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE--NRIR 298
ETIK++ ++GARI+ + + PP + I GT +QI+ A+QL+ E I N +
Sbjct: 397 ETIKSISQQSGARIE-LQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 455
Query: 299 NPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P G + G P P GTP P P Y PG PG P PP Y
Sbjct: 456 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAP---Y-NPGP-PGPAPH----GPP-APY 505
Query: 358 PSQPTPGGYPGNW 370
Q YP +W
Sbjct: 506 APQGWGNAYP-HW 517
Score = 252 (93.8 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 79/245 (32%), Positives = 126/245 (51%)
Query: 60 FQAAKRRAEQIAARLCNSVSAEA----------KRPRVENGSGGFDSADKGFSSPPSDLK 109
F+ A +RA QIAA++ KRP +E+G D D +P +D
Sbjct: 31 FKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRP-LEDG----DQPDAKKVAPQNDSF 85
Query: 110 SIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTE 169
P P+ +S+ T ++ ++P+ VG IIG+ GE I +Q +SG KIQ+ D+
Sbjct: 86 GTQLP---PMHQQQSRSVMT-EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG 141
Query: 170 ADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPN 229
P RS L GTPE + A++L+ D + E G G A + + IP
Sbjct: 142 G---LPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPGFHHGDGPGNAVQE---IMIPA 194
Query: 230 NKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVN 289
+K GLVIGKGGETIK +Q R G ++++ + P +T ++ ++I G +++ AK++V
Sbjct: 195 SKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVL 252
Query: 290 EVISE 294
E+I +
Sbjct: 253 ELIRD 257
Score = 220 (82.5 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 60/215 (27%), Positives = 112/215 (52%)
Query: 131 KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAK 190
++I IP + G++IGK GETIK LQ ++G K+ + +D + + + + + G P ++ +
Sbjct: 188 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQQ 246
Query: 191 AEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 247 AKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 304
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
G RIQ P T+ ER QI G ++ + A +++ +++ + NP G +
Sbjct: 305 AGVRIQF----KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPG-GPGPGGR 359
Query: 310 GYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
G + R +W G PG +Q+ + ++ P G
Sbjct: 360 G-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 389
Score = 136 (52.9 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT E ++SAK
Sbjct: 106 KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGTPESVQSAK 161
Query: 286 QLVNEVISENR 296
+L+++++ + R
Sbjct: 162 RLLDQIVEKGR 172
Score = 93 (37.8 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 47/172 (27%), Positives = 61/172 (35%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ QQQ A G + N+ + +
Sbjct: 486 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAH 543
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY------GVPPTS 529
Y Q Q PP + A Q G G Q +P A Y VP +
Sbjct: 544 YYQQ--QAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPT 601
Query: 530 QSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSH 581
+ G Q + +A Y QA P G Q P G + SH
Sbjct: 602 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQ-GMPQHPPAPQG-FANHARSH 651
Score = 76 (31.8 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 33/115 (28%), Positives = 43/115 (37%)
Query: 487 PPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVP--PQSG 542
PPV G G +G P P T P G P+ Y P + +G P PQ
Sbjct: 456 PPVPHGPH-GVPGPHGPPGPPGPGT----PMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 510
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Y Q Q P +P G S A Y +QPPP++ A + +Q
Sbjct: 511 GNAYPHWQQQAP-PDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQ 564
Score = 63 (27.2 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 39/122 (31%), Positives = 48/122 (39%)
Query: 472 HTPSYGAQGDSTQAPP-PVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPS 522
H P +G G PP P MG Y G P+P+ A Y PQG P
Sbjct: 460 HGP-HGVPGP--HGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPH 516
Query: 523 YG--VPPT-SQSGYGSQVPPQSGY-AGYGMPQAQKPLANP---PAYGQT-----QQSPGS 570
+ PP +++G + Y A Y QAQ P A P P QT QQ+P
Sbjct: 517 WQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAP 576
Query: 571 AG 572
AG
Sbjct: 577 AG 578
Score = 59 (25.8 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 23/75 (30%), Positives = 31/75 (41%)
Query: 298 RNPAMAG--GYSQ--QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQP 352
+NPA AG Y++ + Y + + P GAP QP Y Y Q Y + P
Sbjct: 572 QNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSP 631
Query: 353 PYGGYPSQP-TPGGY 366
G P P P G+
Sbjct: 632 Q--GMPQHPPAPQGF 644
Score = 55 (24.4 bits), Expect = 2.0e-19, Sum P(3) = 2.0e-19
Identities = 24/65 (36%), Positives = 28/65 (43%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ--PT 362
Y QQ QA+PP + GAP+ Q G G Q A GQ Y + Y Q P
Sbjct: 544 YYQQ--QAQPPPA-APAGAPTTTQTNGQGDQQNPAPAGQV-DYTKAWEEYYKKMGQAVPA 599
Query: 363 PGGYP 367
P G P
Sbjct: 600 PTGAP 604
Score = 54 (24.1 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 20/81 (24%), Positives = 26/81 (32%)
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSP---GSAGGYGQPGYSHS 582
PP +G VP G G P NP Y P G Y G+ ++
Sbjct: 456 PPVPHGPHG--VPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNA 513
Query: 583 QPPPSSYAQPDSGSQRAPPSN 603
P A PD P++
Sbjct: 514 YPHWQQQAPPDPAKAGTDPNS 534
Score = 42 (19.8 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 15/38 (39%), Positives = 16/38 (42%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY--HAPQ-SGYGQAA 447
YS A Y QQ YAQ S G H P G+ A
Sbjct: 611 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGFANHA 648
>UNIPROTKB|B4DT31 [details] [associations]
symbol:FUBP1 "cDNA FLJ53425, highly similar to Far upstream
element-binding protein 1" species:9606 "Homo sapiens" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0003723 EMBL:AC096948 UniGene:Hs.567380
HGNC:HGNC:4004 HOGENOM:HOG000231552 HOVERGEN:HBG000625
ChiTaRS:FUBP1 InterPro:IPR015096 Pfam:PF09005 EMBL:AK300032
IPI:IPI00641948 SMR:B4DT31 STRING:B4DT31 Ensembl:ENST00000436586
UCSC:uc010orm.2 OMA:NGQEGDQ Uniprot:B4DT31
Length = 665
Score = 281 (104.0 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 86/253 (33%), Positives = 121/253 (47%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 301 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPERIAQITGPPDRCQHAA 357
Query: 193 QLINDVLAEAESG---GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLVIGKGG 240
++I D+L ++G G G R R GQ G F +P K GL+IGKGG
Sbjct: 358 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 417
Query: 241 ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE--NRIR 298
ETIK++ ++GARI+ + + PP + I GT +QI+ A+QL+ E I N +
Sbjct: 418 ETIKSISQQSGARIE-LQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 476
Query: 299 NPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P G + G P P GTP P P Y PG PG P PP Y
Sbjct: 477 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAP---Y-NPGP-PGPAPH----GPP-APY 526
Query: 358 PSQPTPGGYPGNW 370
Q YP +W
Sbjct: 527 APQGWGNAYP-HW 538
Score = 257 (95.5 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 83/258 (32%), Positives = 129/258 (50%)
Query: 60 FQAAKRRAEQIAARLCNSVSAEA----------KRPRVENGSGGFDSADKG--FSSPPSD 107
F+ A +RA QIAA++ KRP +E+G G + S + PS
Sbjct: 31 FKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRP-LEDGDGSWTSPSSTTHWEGMPSP 89
Query: 108 LKSIP-APSAIPV--SYGG-----YQSMGTS---KKIEIPNIRVGVIIGKSGETIKYLQL 156
K P A P S+G +Q S ++ ++P+ VG IIG+ GE I +Q
Sbjct: 90 FKDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQ 149
Query: 157 QSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTG 216
+SG KIQ+ D+ P RS L GTPE + A++L+ D + E G G
Sbjct: 150 ESGCKIQIAPDSGG---LPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPGFHHGDGPG 205
Query: 217 QAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDG 276
A + + IP +K GLVIGKGGETIK +Q R G ++++ + P +T ++ ++I G
Sbjct: 206 NAVQE---IMIPASKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLRITG 260
Query: 277 TSEQIESAKQLVNEVISE 294
+++ AK++V E+I +
Sbjct: 261 DPYKVQQAKEMVLELIRD 278
Score = 220 (82.5 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 60/215 (27%), Positives = 112/215 (52%)
Query: 131 KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAK 190
++I IP + G++IGK GETIK LQ ++G K+ + +D + + + + + G P ++ +
Sbjct: 209 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQQ 267
Query: 191 AEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 268 AKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 325
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
G RIQ P T+ ER QI G ++ + A +++ +++ + NP G +
Sbjct: 326 AGVRIQF----KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPG-GPGPGGR 380
Query: 310 GYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
G + R +W G PG +Q+ + ++ P G
Sbjct: 381 G-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 410
Score = 150 (57.9 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 48/199 (24%), Positives = 93/199 (46%)
Query: 106 SDLKSIPAPSAIPVSYGGYQSMG----TSKKIEIPNIR--VGVIIGKSGETIKYLQLQSG 159
+D ++P PS+ GG G + K + R I G +G ++ G
Sbjct: 2 ADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYG 61
Query: 160 AKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGI--VARRLTGQ 217
+ + D + SP+ + G P K + V + +S G+ + + ++ +
Sbjct: 62 GQKRPLEDGDGSWTSPSSTTHWEGMPSPF-KDQPDAKKVAPQNDSFGTQLPPMHQQQSRS 120
Query: 218 AGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGT 277
++ + K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT
Sbjct: 121 VMTEEY--KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGT 174
Query: 278 SEQIESAKQLVNEVISENR 296
E ++SAK+L+++++ + R
Sbjct: 175 PESVQSAKRLLDQIVEKGR 193
Score = 93 (37.8 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 49/165 (29%), Positives = 62/165 (37%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ QQQ A G + N+ + +
Sbjct: 507 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAH 564
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTAS-----------YPPQGATQPS-Y 523
Y Q Q PP + A Q G G Q +P A Y G P+
Sbjct: 565 YYQQ--QAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPT 622
Query: 524 GVPPTSQSGYGSQ----VPPQSGYAGYGMPQAQKPLANPPA-YGQ 563
G PP Q Y + Q+ Y PQ P +PPA GQ
Sbjct: 623 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGM-P-QHPPAPQGQ 665
Score = 76 (31.8 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 33/115 (28%), Positives = 43/115 (37%)
Query: 487 PPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVP--PQSG 542
PPV G G +G P P T P G P+ Y P + +G P PQ
Sbjct: 477 PPVPHGPH-GVPGPHGPPGPPGPGT----PMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 531
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Y Q Q P +P G S A Y +QPPP++ A + +Q
Sbjct: 532 GNAYPHWQQQAP-PDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQ 585
Score = 73 (30.8 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 48/187 (25%), Positives = 65/187 (34%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDST-------QAPP 487
G H P G P YN A + G Y QG QAPP
Sbjct: 488 GPHGPPGPPGPGTPMGP---YNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPP 544
Query: 488 -PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS-GYGSQV-PPQSGYA 544
P ++ + + PP A P+ G P T+Q+ G G Q P +G
Sbjct: 545 DPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAA--PA-GAPTTTQTNGQGDQQNPAPAGQV 601
Query: 545 GYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-----HSQPPPSSYAQPD-SGSQR 598
Y +A + GQ +P A GQP YS + + + YAQ G +
Sbjct: 602 DY--TKAWEEYYKK--MGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQ 657
Query: 599 APPSNYG 605
PP+ G
Sbjct: 658 HPPAPQG 664
Score = 63 (27.2 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 39/122 (31%), Positives = 48/122 (39%)
Query: 472 HTPSYGAQGDSTQAPP-PVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPS 522
H P +G G PP P MG Y G P+P+ A Y PQG P
Sbjct: 481 HGP-HGVPGP--HGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPH 537
Query: 523 YG--VPPT-SQSGYGSQVPPQSGY-AGYGMPQAQKPLANP---PAYGQT-----QQSPGS 570
+ PP +++G + Y A Y QAQ P A P P QT QQ+P
Sbjct: 538 WQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAP 597
Query: 571 AG 572
AG
Sbjct: 598 AG 599
Score = 56 (24.8 bits), Expect = 7.6e-20, Sum P(2) = 7.6e-20
Identities = 23/74 (31%), Positives = 30/74 (40%)
Query: 298 RNPAMAG--GYSQ--QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQP 352
+NPA AG Y++ + Y + + P GAP QP Y Y Q Y + P
Sbjct: 593 QNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSP 652
Query: 353 PYGGYPSQP-TPGG 365
G P P P G
Sbjct: 653 Q--GMPQHPPAPQG 664
Score = 55 (24.4 bits), Expect = 5.8e-20, Sum P(3) = 5.8e-20
Identities = 24/65 (36%), Positives = 28/65 (43%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ--PT 362
Y QQ QA+PP + GAP+ Q G G Q A GQ Y + Y Q P
Sbjct: 565 YYQQ--QAQPPPA-APAGAPTTTQTNGQGDQQNPAPAGQV-DYTKAWEEYYKKMGQAVPA 620
Query: 363 PGGYP 367
P G P
Sbjct: 621 PTGAP 625
Score = 42 (19.8 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQ 445
YS A Y QQ YAQ S G P + GQ
Sbjct: 632 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 665
>MGI|MGI:1336214 [details] [associations]
symbol:Khsrp "KH-type splicing regulatory protein"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730
"mRNA 3'-UTR binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] Reactome:REACT_78136
Reactome:REACT_88316 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS00178 PROSITE:PS50084 SMART:SM00322
MGI:MGI:1336214 GO:GO:0005829 GO:GO:0005634 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0006351
GO:GO:0003723 GO:GO:0051028 GO:GO:0010494 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210
InterPro:IPR015096 Pfam:PF09005 CTD:8570 OMA:QASGNCH EMBL:AK156541
EMBL:CT571247 EMBL:BC064454 EMBL:BC108414 IPI:IPI00462934
RefSeq:NP_034743.3 UniGene:Mm.34296 HSSP:Q91WJ8
ProteinModelPortal:Q3U0V1 SMR:Q3U0V1 IntAct:Q3U0V1 STRING:Q3U0V1
PhosphoSite:Q3U0V1 PaxDb:Q3U0V1 PRIDE:Q3U0V1 DNASU:16549
Ensembl:ENSMUST00000007814 GeneID:16549 KEGG:mmu:16549
UCSC:uc008ddr.2 GeneTree:ENSGT00650000093048 InParanoid:Q3U0V1
OrthoDB:EOG451DQX NextBio:290019 Bgee:Q3U0V1 CleanEx:MM_KHSRP
Genevestigator:Q3U0V1 Uniprot:Q3U0V1
Length = 748
Score = 273 (101.2 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 86/280 (30%), Positives = 133/280 (47%)
Query: 24 PPSAAARRPTGFSAPDPAVAPTSYN-SVPP----PADEFQDFQAAKRRAEQIAARLCNSV 78
PP A R G P S S PP P F A +RA QIAA++
Sbjct: 34 PPGAGDRGGGGPGGGGPGGGGASGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDA 93
Query: 79 SAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGG-YQSMGTS--KKIEI 135
+ + G GG + P S K +I G + TS ++ +
Sbjct: 94 ATTVNNNTPDFGFGGQKRQLEDGDQPDSK-KLASQGDSIGSQLGPIHPPPRTSMTEEYRV 152
Query: 136 PNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLI 195
P+ VG+IIG+ GE I +Q SG K+Q++ D+ P RSV L G PE + KA+ ++
Sbjct: 153 PDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGG---LPERSVSLTGAPESVQKAKMML 209
Query: 196 NDVLAEAESGGSGIVARRLTG-QAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
+D+++ G G G Q G+ M IP K GLVIGKGGETIK +Q R G +
Sbjct: 210 DDIVSRGRGGPPGQFHDNANGGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQERAG--V 266
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
++I + +T+ ++ ++I G +++ A ++V +++ E
Sbjct: 267 KMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 306
Score = 263 (97.6 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 87/252 (34%), Positives = 117/252 (46%)
Query: 121 YGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE 180
YG +G + +P VGV+IG+SGE IK +Q +G +IQ +D D P +
Sbjct: 318 YGS--RVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD---DGTGPEKIAH 372
Query: 181 LMGTPEQIAKAEQLINDVLAEAESGGSGIVAR---------RLTGQAG----SDHFAMKI 227
+MG P++ A ++IND+L SG G R GQ I
Sbjct: 373 IMGPPDRCEHAARIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSI 432
Query: 228 PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPP-GDTSTERTVQIDGTSEQIESAKQ 286
P +K GLVIG+GGE +K + +TGA ++ I LPP GD + + V I G+ +QI+ AKQ
Sbjct: 433 PTHKCGLVIGRGGENVKAINQQTGAFVE-ISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQ 490
Query: 287 LVNEVISENRIRNPAMAGGYSQQGYQA--RP-PTSWGTPGAPSMQQPGYGYVQPGAYP-- 341
L+ E I GG G P P + G PGAP P G P YP
Sbjct: 491 LIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAP----PHAGGPPPHQYPPQ 546
Query: 342 GQTPQYNMSQPP 353
G Y QPP
Sbjct: 547 GWGNTYPQWQPP 558
Score = 247 (92.0 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 64/199 (32%), Positives = 104/199 (52%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
GT ++I IP + G++IGK GETIK LQ ++G K+ + +D + N + + ++G P +
Sbjct: 234 GTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVD-KPLRIIGDPYK 292
Query: 188 IAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQ 247
+ +A +++ D+L E + GG G R G + +P + VG+VIG+ GE IK +Q
Sbjct: 293 VQQACEMVMDILRERDQGGFG--DRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQ 350
Query: 248 ARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAG--G 305
G RIQ G T E+ I G ++ E A +++N+++ R P G G
Sbjct: 351 NDAGVRIQ---FKQDDG-TGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGAPG 406
Query: 306 YSQQGY-QARPPTSWGTPG 323
G + R +WG PG
Sbjct: 407 MPPGGRGRGRGQGNWGPPG 425
Score = 133 (51.9 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 157 QSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLA-EAESGGSGIVARRLT 215
Q AKI D +N+ T G Q+ +Q + LA + +S GS +
Sbjct: 84 QIAAKIG--GDAATTVNNNTPDFGFGGQKRQLEDGDQPDSKKLASQGDSIGSQLGPIHPP 141
Query: 216 GQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQID 275
+ ++P+ VGL+IG+GGE I +Q +G ++Q+ P G ER+V +
Sbjct: 142 PRTSMTE-EYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISP---DSGGLP-ERSVSLT 196
Query: 276 GTSEQIESAKQLVNEVISENR 296
G E ++ AK ++++++S R
Sbjct: 197 GAPESVQKAKMMLDDIVSRGR 217
Score = 103 (41.3 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 58/198 (29%), Positives = 74/198 (37%)
Query: 416 PPASGYNQQGQG--YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ---E 470
PP Y QG G Y Q H P AA D + AA Y +
Sbjct: 538 PPPHQYPPQGWGNTYPQWQPPAPHDPNKA--AAAATDPNAAW--AAYYSHYYQQPPGPVP 593
Query: 471 GHTPSYGA---QGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQGATQPSYGV 525
G P+ A QG+ Q PP QS + Y GQQP A PPQ ++
Sbjct: 594 GPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAW-- 649
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ-PGYSHSQP 584
+ Y Q +G G G P +P + A+ + + A YGQ PG QP
Sbjct: 650 ----EEYYKKQAQVATG-GGPGAPPGSQPDYSA-AWAEYYRQ--QAAYYGQTPGPGGPQP 701
Query: 585 PPSSYAQPD-SGSQRAPP 601
PP+ Q SG+ PP
Sbjct: 702 PPTQQGQQQASGNCHPPP 719
Score = 95 (38.5 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 41/127 (32%), Positives = 48/127 (37%)
Query: 478 AQGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQG----ATQPSYGVPPTSQS 531
AQG+ Q PP QS + Y GQQP A PPQ A + Y +
Sbjct: 604 AQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAWEEYYKKQAQVAT 661
Query: 532 GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQ-----QSPGSAGGYGQP-GYSHSQPP 585
G G PP S Y A+ YGQT Q P + G Q G H PP
Sbjct: 662 GGGPGAPPGS-QPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQASGNCHPPPP 720
Query: 586 PSSYAQP 592
P S+ P
Sbjct: 721 PFSFQPP 727
Score = 75 (31.5 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 22/48 (45%), Positives = 23/48 (47%)
Query: 312 QARPPTSWGTPGAPSMQQPGYG------YVQPGAYPGQTPQYNMSQPP 353
QA+ T G PGAP QP Y Y Q AY GQTP QPP
Sbjct: 656 QAQVATGGG-PGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPP 702
Score = 71 (30.1 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 28/106 (26%), Positives = 38/106 (35%)
Query: 503 GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYG 562
G P+ + P Q G PP + Q PPQ G+ G PQ Q P + P
Sbjct: 509 GPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQ-GW-GNTYPQWQPPAPHDPNKA 566
Query: 563 QTQQSPGSAGGYGQPGYSHSQPP-------PSSYAQPDSGSQRAPP 601
+ +A + + QPP P+ A P G PP
Sbjct: 567 AAAATDPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPP 612
Score = 69 (29.3 bits), Expect = 2.5e-25, Sum P(3) = 2.5e-25
Identities = 39/129 (30%), Positives = 49/129 (37%)
Query: 415 QPPASGYNQQGQGYAQDSYGGYHAPQS----GYGQAAPYDQQQGYNSA-AGYGNVNNTSQ 469
QP G Q Q Y + ++ Y+ Q+ G G AP Q Y++A A Y +
Sbjct: 633 QPQQPGAPPQ-QDYTK-AWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYR-QQAAY 689
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
G TP G PPP Q GQQ Q S N PP + QP V P
Sbjct: 690 YGQTPGPGGP-----QPPPTQQ----GQQ------QASGNCHPPPPPFSFQPPATVHPAL 734
Query: 530 QSGYGSQVP 538
G+ P
Sbjct: 735 VGSAGNPFP 743
Score = 65 (27.9 bits), Expect = 2.5e-25, Sum P(3) = 2.5e-25
Identities = 20/60 (33%), Positives = 24/60 (40%)
Query: 315 PPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG---YPGNWD 371
P +W + QQP PG PG P + PP G P QP P G Y W+
Sbjct: 573 PNAAWAAYYSHYYQQP------PGPVPGPAPA--PAAPPAQGEPPQPPPTGQSDYTKAWE 624
Score = 44 (20.5 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 19/81 (23%), Positives = 26/81 (32%)
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
G P G P G G P A PP + Q G+ QP H
Sbjct: 504 GPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDP 563
Query: 584 PPPSSYAQPDSGSQRAPPSNY 604
++ A + + A S+Y
Sbjct: 564 NKAAAAATDPNAAWAAYYSHY 584
>UNIPROTKB|E2QVT3 [details] [associations]
symbol:KHSRP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
Ensembl:ENSCAFT00000029641 Uniprot:E2QVT3
Length = 743
Score = 268 (99.4 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 90/266 (33%), Positives = 124/266 (46%)
Query: 121 YGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE 180
YG +G + +P VGV+IG+SGE IK +Q +G +IQ +D D P +
Sbjct: 314 YGS--RIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD---DGTGPEKIAH 368
Query: 181 LMGTPEQIAKAEQLINDVLAEAESG------GSGIV--AR-RLTGQAG----SDHFAMKI 227
+MG P++ A ++IND+L SG G G+ R R GQ I
Sbjct: 369 IMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSI 428
Query: 228 PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPP-GDTSTERTVQIDGTSEQIESAKQ 286
P +K GLVIG+GGE +K + +TGA ++ I LPP GD + + + I G+ +QI+ AKQ
Sbjct: 429 PTHKCGLVIGRGGENVKAINQQTGAFVE-ISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQ 486
Query: 287 LVNEVISENRIRNPAMAGGYSQQGYQA--RP-PTSWGTPGAPSMQQPGYGYVQPGAYP-- 341
L+ E I GG G P P + G PGAP P G P YP
Sbjct: 487 LIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAP----PHAGGPPPHQYPPQ 542
Query: 342 GQTPQYNMSQPPYGGYPSQPTPGGYP 367
G Y QPP P++ P
Sbjct: 543 GWGNTYPQWQPPAPHDPNKAAAAADP 568
Score = 252 (93.8 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 71/230 (30%), Positives = 117/230 (50%)
Query: 69 QIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGG-YQSM 127
QIAA++ + + G GG + P S K +I G +
Sbjct: 80 QIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESK-KLASQGDSISSQLGPIHPPP 138
Query: 128 GTS--KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTP 185
TS ++ +P+ VG+IIG+ GE I +Q SG K+Q++ D+ P RSV L G P
Sbjct: 139 RTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGG---LPERSVSLTGAP 195
Query: 186 EQIAKAEQLINDVLAEAESGGSGIVARRLTG-QAGSDHFAMKIPNNKVGLVIGKGGETIK 244
E + KA+ +++D+++ G G G Q G+ M IP K GLVIGKGGETIK
Sbjct: 196 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIM-IPAGKAGLVIGKGGETIK 254
Query: 245 NMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
+Q R G +++I + +T+ ++ ++I G +++ A ++V +++ E
Sbjct: 255 QLQERAG--VKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 302
Score = 247 (92.0 bits), Expect = 9.4e-23, Sum P(3) = 9.4e-23
Identities = 64/199 (32%), Positives = 104/199 (52%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
GT ++I IP + G++IGK GETIK LQ ++G K+ + +D + N + + ++G P +
Sbjct: 230 GTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVD-KPLRIIGDPYK 288
Query: 188 IAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQ 247
+ +A +++ D+L E + GG G R G + +P + VG+VIG+ GE IK +Q
Sbjct: 289 VQQACEMVMDILRERDQGGFG--DRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQ 346
Query: 248 ARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYS 307
G RIQ G T E+ I G ++ E A +++N+++ R P GG
Sbjct: 347 NDAGVRIQ---FKQDDG-TGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPG 402
Query: 308 QQ--GY-QARPPTSWGTPG 323
G + R +WG PG
Sbjct: 403 MPPGGRGRGRGQGNWGPPG 421
Score = 129 (50.5 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
++P+ VGL+IG+GGE I +Q +G ++Q+ P G ER+V + G E ++ AK
Sbjct: 147 RVPDGMVGLIIGRGGEQINKIQQDSGCKVQISP---DSGGLP-ERSVSLTGAPESVQKAK 202
Query: 286 QLVNEVISENR 296
++++++S R
Sbjct: 203 MMLDDIVSRGR 213
Score = 110 (43.8 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 96 SADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQ 155
S G PP P G + G IP + G++IG+ GE +K +
Sbjct: 389 SLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAIN 448
Query: 156 LQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLIND 197
Q+GA ++++R + + + + G+P+QI A+QLI +
Sbjct: 449 QQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEE 490
Score = 108 (43.1 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 57/195 (29%), Positives = 71/195 (36%)
Query: 416 PPASGYNQQGQG--YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
PP Y QG G Y Q H P A P Y S Y G
Sbjct: 534 PPPHQYPPQGWGNTYPQWQPPAPHDPNKAAAAADPNAAWAAYYSH--YYQQPPGPVPGPA 591
Query: 474 PSYGA---QGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQGATQPSYGVPPT 528
P+ A QG+ Q PP QS + Y GQQP A PPQ ++
Sbjct: 592 PAPAAPPAQGEPPQPPPAGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAW----- 644
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ-PGYSHSQPPPS 587
+ Y Q +G G G P +P + A+ + + A YGQ PG QPPP+
Sbjct: 645 -EEYYKKQAQVATG-GGPGAPPGSQPDYSA-AWAEYYRQ--QAAYYGQTPGPGGPQPPPT 699
Query: 588 SYAQPD-SGSQRAPP 601
Q SG+ PP
Sbjct: 700 QQGQQQASGNCHPPP 714
Score = 95 (38.5 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 41/127 (32%), Positives = 48/127 (37%)
Query: 478 AQGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQG----ATQPSYGVPPTSQS 531
AQG+ Q PP QS + Y GQQP A PPQ A + Y +
Sbjct: 599 AQGEPPQPPPAGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAWEEYYKKQAQVAT 656
Query: 532 GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQ-----QSPGSAGGYGQP-GYSHSQPP 585
G G PP S Y A+ YGQT Q P + G Q G H PP
Sbjct: 657 GGGPGAPPGS-QPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQASGNCHPPPP 715
Query: 586 PSSYAQP 592
P S+ P
Sbjct: 716 PFSFQPP 722
Score = 78 (32.5 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 30/105 (28%), Positives = 37/105 (35%)
Query: 503 GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYG 562
G P+ + P Q G PP + Q PPQ G+ G PQ Q P + P
Sbjct: 505 GPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQ-GW-GNTYPQWQPPAPHDPNKA 562
Query: 563 QTQQSPGSAGG------YGQPGYSHSQPPPSSYAQPDSGSQRAPP 601
P +A Y QP P P+ A P G PP
Sbjct: 563 AAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPP 607
Score = 75 (31.5 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 22/48 (45%), Positives = 23/48 (47%)
Query: 312 QARPPTSWGTPGAPSMQQPGYG------YVQPGAYPGQTPQYNMSQPP 353
QA+ T G PGAP QP Y Y Q AY GQTP QPP
Sbjct: 651 QAQVATGGG-PGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPP 697
Score = 69 (29.3 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 21/62 (33%), Positives = 25/62 (40%)
Query: 313 ARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG---YPGN 369
A P +W + QQP PG PG P + PP G P QP P G Y
Sbjct: 566 ADPNAAWAAYYSHYYQQP------PGPVPGPAPA--PAAPPAQGEPPQPPPAGQSDYTKA 617
Query: 370 WD 371
W+
Sbjct: 618 WE 619
Score = 69 (29.3 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 39/129 (30%), Positives = 49/129 (37%)
Query: 415 QPPASGYNQQGQGYAQDSYGGYHAPQS----GYGQAAPYDQQQGYNSA-AGYGNVNNTSQ 469
QP G Q Q Y + ++ Y+ Q+ G G AP Q Y++A A Y +
Sbjct: 628 QPQQPGAPPQ-QDYTK-AWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYR-QQAAY 684
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
G TP G PPP Q GQQ Q S N PP + QP V P
Sbjct: 685 YGQTPGPGGP-----QPPPTQQ----GQQ------QASGNCHPPPPPFSFQPPATVHPAL 729
Query: 530 QSGYGSQVP 538
G+ P
Sbjct: 730 VGSAGNPFP 738
Score = 47 (21.6 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 17/71 (23%), Positives = 23/71 (32%)
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
G P G P G G P A PP + Q G+ QP H
Sbjct: 500 GPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDP 559
Query: 584 PPPSSYAQPDS 594
++ A P++
Sbjct: 560 NKAAAAADPNA 570
>MGI|MGI:1196294 [details] [associations]
symbol:Fubp1 "far upstream element (FUSE) binding protein 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=ISO] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 MGI:MGI:1196294 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003723
eggNOG:NOG300923 HOGENOM:HOG000231552 HOVERGEN:HBG000625
InterPro:IPR015096 Pfam:PF09005 EMBL:BC014763 EMBL:AK029458
IPI:IPI00467635 IPI:IPI00874931 UniGene:Mm.278922 PDB:1X4M PDB:1X4N
PDBsum:1X4M PDBsum:1X4N ProteinModelPortal:Q91WJ8 SMR:Q91WJ8
IntAct:Q91WJ8 STRING:Q91WJ8 PhosphoSite:Q91WJ8
REPRODUCTION-2DPAGE:Q91WJ8 PaxDb:Q91WJ8 PRIDE:Q91WJ8
UCSC:uc008rsv.1 InParanoid:Q91WJ8 EvolutionaryTrace:Q91WJ8
CleanEx:MM_FUBP1 Genevestigator:Q91WJ8
GermOnline:ENSMUSG00000028034 Uniprot:Q91WJ8
Length = 651
Score = 279 (103.3 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 86/253 (33%), Positives = 120/253 (47%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 276 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPDRIAQITGPPDRCQHAA 332
Query: 193 QLINDVLAEAESG---GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLVIGKGG 240
++I D+L ++G G G R R GQ G F +P K GL+IGKGG
Sbjct: 333 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 392
Query: 241 ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE--NRIR 298
ETIK++ ++GARI+ + PP + I GT +QI+ A+QL+ E I N +
Sbjct: 393 ETIKSISQQSGARIE-LQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 451
Query: 299 NPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P G + G P P GTP P P Y PG PG P PP Y
Sbjct: 452 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAP---Y-NPGP-PGPAPH----GPP-APY 501
Query: 358 PSQPTPGGYPGNW 370
Q YP +W
Sbjct: 502 APQGWGNAYP-HW 513
Score = 259 (96.2 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 80/263 (30%), Positives = 130/263 (49%)
Query: 47 YNSVPPPADE---------FQD-FQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDS 96
Y++VPPP+ D F+ A +RA QIAA++ + G GG
Sbjct: 4 YSTVPPPSSGSAGGGGGGVVNDAFKDALQRARQIAAKIGGDAGTSLNSN--DYGYGGQKR 61
Query: 97 ADKGFSSPPSDLKSIPAPS-----AIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETI 151
+ P D K +P + +P + +++ ++P+ VG IIG+ GE I
Sbjct: 62 PLEDGDQP--DAKKVPPQNDSFGAQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQI 119
Query: 152 KYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVA 211
+Q +SG KIQ+ D+ P RS L GTPE + A++L+ D + E G
Sbjct: 120 SRIQQESGCKIQIAPDSGG---LPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPGFHH 175
Query: 212 RRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERT 271
G A + + IP +K GLVIGKGGETIK +Q R G ++++ + P +T ++
Sbjct: 176 GDGPGNAVQE---IMIPASKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKP 230
Query: 272 VQIDGTSEQIESAKQLVNEVISE 294
++I G +++ AK++V E+I +
Sbjct: 231 LRITGDPYKVQQAKEMVLELIRD 253
Score = 217 (81.4 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 59/215 (27%), Positives = 112/215 (52%)
Query: 131 KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAK 190
++I IP + G++IGK GETIK LQ ++G K+ + +D + + + + + G P ++ +
Sbjct: 184 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQQ 242
Query: 191 AEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 243 AKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 300
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
G RIQ P T+ +R QI G ++ + A +++ +++ + NP G +
Sbjct: 301 AGVRIQF----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPG-GPGPGGR 355
Query: 310 GYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
G + R +W G PG +Q+ + ++ P G
Sbjct: 356 G-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 385
Score = 136 (52.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT E ++SAK
Sbjct: 102 KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGTPESVQSAK 157
Query: 286 QLVNEVISENR 296
+L+++++ + R
Sbjct: 158 RLLDQIVEKGR 168
Score = 93 (37.8 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 47/172 (27%), Positives = 61/172 (35%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ QQQ A G + N+ + +
Sbjct: 482 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQQQAPPDPAKAGADPNSAAWAAYYAH 539
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY------GVPPTS 529
Y Q Q PP + A Q G G Q +P A Y VP +
Sbjct: 540 YYQQ--QAQPPPAAPAGAPATTQTNGQGDQQAPAPAGQVDYTKAWEEYYKKMGQAVPAPA 597
Query: 530 QSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSH 581
+ G Q + +A Y QA P G Q P G + SH
Sbjct: 598 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQ-GMPQHPPAPQG-FANHARSH 647
Score = 76 (31.8 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 33/115 (28%), Positives = 43/115 (37%)
Query: 487 PPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVP--PQSG 542
PPV G G +G P P T P G P+ Y P + +G P PQ
Sbjct: 452 PPVPHGPH-GVPGPHGPPGPPGPGT----PMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 506
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Y Q Q P +P G S A Y +QPPP++ A + +Q
Sbjct: 507 GNAYPHWQQQAP-PDPAKAGADPNSAAWAAYYAHYYQQQAQPPPAAPAGAPATTQ 560
Score = 59 (25.8 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 48/198 (24%), Positives = 67/198 (33%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSG---YGQAAPYDQQQGYNSAAGYGNVNNTSQEGH 472
P G +G+G Q ++ P G + P + G G + + SQ+
Sbjct: 347 PGGPGPGGRGRGRGQGNWN--MGPPGGLQEFNFIVPTGKT-GLIIGKGGETIKSISQQS- 402
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQ--GATQPSYGVP-PTS 529
GA+ + ++PPP GT QQ + G P G P P
Sbjct: 403 ----GARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP-LGPPVPHG 457
Query: 530 QSGY-GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSP---GSAGGYGQPGYSHSQPP 585
G G PP G G G P P NP Y P G Y G+ ++ P
Sbjct: 458 PHGVPGPHGPP--GPPGPGTPMG--PY-NPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPH 512
Query: 586 PSSYAQPDSGSQRAPPSN 603
A PD A P++
Sbjct: 513 WQQQAPPDPAKAGADPNS 530
Score = 58 (25.5 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 24/65 (36%), Positives = 28/65 (43%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ--PT 362
Y QQ QA+PP + GAP+ Q G G Q A GQ Y + Y Q P
Sbjct: 540 YYQQ--QAQPPPA-APAGAPATTQTNGQGDQQAPAPAGQV-DYTKAWEEYYKKMGQAVPA 595
Query: 363 PGGYP 367
P G P
Sbjct: 596 PAGAP 600
Score = 53 (23.7 bits), Expect = 8.4e-20, Sum P(2) = 8.4e-20
Identities = 20/62 (32%), Positives = 24/62 (38%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP-TPG 364
Y + G QA P + GAP QP Y Y Q Y + P G P P P
Sbjct: 586 YKKMG-QAVPAPA----GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQ--GMPQHPPAPQ 638
Query: 365 GY 366
G+
Sbjct: 639 GF 640
Score = 42 (19.8 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 15/38 (39%), Positives = 16/38 (42%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY--HAPQ-SGYGQAA 447
YS A Y QQ YAQ S G H P G+ A
Sbjct: 607 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGFANHA 644
>UNIPROTKB|Q92945 [details] [associations]
symbol:KHSRP "Far upstream element-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 GO:GO:0005654 GO:GO:0006355 GO:GO:0003677
GO:GO:0006397 GO:GO:0006351 GO:GO:0003723 GO:GO:0051028
GO:GO:0000375 eggNOG:NOG300923 HOGENOM:HOG000231552
HOVERGEN:HBG000625 KO:K13210 InterPro:IPR015096 Pfam:PF09005
CTD:8570 EMBL:U94832 EMBL:AC011491 EMBL:AC011539 EMBL:BC085004
EMBL:AF093747 EMBL:AF093745 EMBL:AF093748 EMBL:U69126 EMBL:AB209662
IPI:IPI00479786 IPI:IPI00855957 RefSeq:NP_003676.2
UniGene:Hs.727344 PDB:2HH2 PDB:2HH3 PDB:2JVZ PDB:2OPU PDB:2OPV
PDB:4B8T PDBsum:2HH2 PDBsum:2HH3 PDBsum:2JVZ PDBsum:2OPU
PDBsum:2OPV PDBsum:4B8T ProteinModelPortal:Q92945 SMR:Q92945
DIP:DIP-48484N IntAct:Q92945 STRING:Q92945 PhosphoSite:Q92945
DMDM:160380711 REPRODUCTION-2DPAGE:Q92945 PaxDb:Q92945 PRIDE:Q92945
Ensembl:ENST00000398148 GeneID:8570 KEGG:hsa:8570 UCSC:uc002mer.4
GeneCards:GC19M006413 H-InvDB:HIX0040083 HGNC:HGNC:6316
HPA:HPA034739 MIM:603445 neXtProt:NX_Q92945 PharmGKB:PA30097
InParanoid:Q92945 OMA:QASGNCH PhylomeDB:Q92945 ChEMBL:CHEMBL1795105
ChiTaRS:KHSRP EvolutionaryTrace:Q92945 GenomeRNAi:8570
NextBio:32149 PMAP-CutDB:Q92945 ArrayExpress:Q92945 Bgee:Q92945
CleanEx:HS_KHSRP Genevestigator:Q92945 GermOnline:ENSG00000088247
Uniprot:Q92945
Length = 711
Score = 279 (103.3 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 85/279 (30%), Positives = 132/279 (47%)
Query: 24 PPSAAARRPTGFSAPDPAVAPTSYNSVPP----PADEFQDFQAAKRRAEQIAARLCNSVS 79
PP A R G P S PP P F A +RA QIAA++ +
Sbjct: 34 PPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAA 93
Query: 80 AEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGG-YQSMGTS--KKIEIP 136
+ G GG + P S K +I G + TS ++ +P
Sbjct: 94 TTVNNSTPDFGFGGQKRQLEDGDQPESK-KLASQGDSISSQLGPIHPPPRTSMTEEYRVP 152
Query: 137 NIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLIN 196
+ VG+IIG+ GE I +Q SG K+Q++ D+ P RSV L G PE + KA+ +++
Sbjct: 153 DGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGG---LPERSVSLTGAPESVQKAKMMLD 209
Query: 197 DVLAEAESGGSGIVARRLTG-QAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
D+++ G G G Q G+ M IP K GLVIGKGGETIK +Q R G ++
Sbjct: 210 DIVSRGRGGPPGQFHDNANGGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQERAG--VK 266
Query: 256 VIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
+I + +T+ ++ ++I G +++ A ++V +++ E
Sbjct: 267 MILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 305
Score = 269 (99.8 bits), Expect = 4.8e-25, Sum P(2) = 4.8e-25
Identities = 90/259 (34%), Positives = 123/259 (47%)
Query: 121 YGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE 180
YG +G + +P VGV+IG+SGE IK +Q +G +IQ +D D P +
Sbjct: 317 YGS--RIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD---DGTGPEKIAH 371
Query: 181 LMGTPEQIAKAEQLINDVLAEAESG------GSGIV--AR-RLTGQAG----SDHFAMKI 227
+MG P++ A ++IND+L SG G G+ R R GQ I
Sbjct: 372 IMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSI 431
Query: 228 PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPP-GDTSTERTVQIDGTSEQIESAKQ 286
P +K GLVIG+GGE +K + +TGA ++ I LPP GD + + + I G+ +QI+ AKQ
Sbjct: 432 PTHKCGLVIGRGGENVKAINQQTGAFVE-ISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQ 489
Query: 287 LVNEVISENRIRNPAMAGGYSQQGYQA--RP-PTSWGTPGAPSMQQPGYGYVQPGAYP-- 341
L+ E I GG G P P + G PGAP P G P YP
Sbjct: 490 LIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAP----PHAGGPPPHQYPPQ 545
Query: 342 GQTPQYNMSQPPYGGYPSQ 360
G Y QPP PS+
Sbjct: 546 GWGNTYPQWQPPAPHDPSK 564
Score = 247 (92.0 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 64/199 (32%), Positives = 104/199 (52%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
GT ++I IP + G++IGK GETIK LQ ++G K+ + +D + N + + ++G P +
Sbjct: 233 GTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVD-KPLRIIGDPYK 291
Query: 188 IAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQ 247
+ +A +++ D+L E + GG G R G + +P + VG+VIG+ GE IK +Q
Sbjct: 292 VQQACEMVMDILRERDQGGFG--DRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQ 349
Query: 248 ARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYS 307
G RIQ G T E+ I G ++ E A +++N+++ R P GG
Sbjct: 350 NDAGVRIQ---FKQDDG-TGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPG 405
Query: 308 QQ--GY-QARPPTSWGTPG 323
G + R +WG PG
Sbjct: 406 MPPGGRGRGRGQGNWGPPG 424
Score = 129 (50.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
++P+ VGL+IG+GGE I +Q +G ++Q+ P G ER+V + G E ++ AK
Sbjct: 150 RVPDGMVGLIIGRGGEQINKIQQDSGCKVQISP---DSGGLP-ERSVSLTGAPESVQKAK 205
Query: 286 QLVNEVISENR 296
++++++S R
Sbjct: 206 MMLDDIVSRGR 216
Score = 110 (43.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 96 SADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQ 155
S G PP P G + G IP + G++IG+ GE +K +
Sbjct: 392 SLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAIN 451
Query: 156 LQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLIND 197
Q+GA ++++R + + + + G+P+QI A+QLI +
Sbjct: 452 QQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEE 493
Score = 94 (38.1 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 54/185 (29%), Positives = 67/185 (36%)
Query: 416 PPASGYNQQGQG--YAQDSYGGYHAPQSGYGQAA-PYDQQQGYNSAAGYGNVNNTSQEGH 472
PP Y QG G Y Q H P AA P Y S Y G
Sbjct: 537 PPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSH--YYQQPPGPVPGP 594
Query: 473 TPSYGA---QGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQGATQPSYGVPP 527
P+ A QG+ Q PP QS + Y GQQP A PPQ ++
Sbjct: 595 APAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAW---- 648
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ-PGYSHSQPPP 586
+ Y Q +G G G P +P + A+ + + A YGQ PG QPPP
Sbjct: 649 --EEYYKKQAQVATG-GGPGAPPGSQPDYSA-AWAEYYRQ--QAAYYGQTPGPGGPQPPP 702
Query: 587 SSYAQ 591
+ Q
Sbjct: 703 TQQGQ 707
Score = 75 (31.5 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 22/48 (45%), Positives = 23/48 (47%)
Query: 312 QARPPTSWGTPGAPSMQQPGYG------YVQPGAYPGQTPQYNMSQPP 353
QA+ T G PGAP QP Y Y Q AY GQTP QPP
Sbjct: 655 QAQVATGGG-PGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPP 701
Score = 74 (31.1 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 28/106 (26%), Positives = 39/106 (36%)
Query: 503 GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYG 562
G P+ + P Q G PP + Q PPQ G+ G PQ Q P + P+
Sbjct: 508 GPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQ-GW-GNTYPQWQPPAPHDPSKA 565
Query: 563 QTQQSPGSAGGYGQPGYSHSQPP-------PSSYAQPDSGSQRAPP 601
+ +A + + QPP P+ A P G PP
Sbjct: 566 AAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPP 611
Score = 67 (28.6 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 21/62 (33%), Positives = 25/62 (40%)
Query: 313 ARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG---YPGN 369
A P +W + QQP PG PG P + PP G P QP P G Y
Sbjct: 570 ADPNAAWAAYYSHYYQQP------PGPVPGPAPA--PAAPPAQGEPPQPPPTGQSDYTKA 621
Query: 370 WD 371
W+
Sbjct: 622 WE 623
Score = 45 (20.9 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 19/81 (23%), Positives = 26/81 (32%)
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
G P G P G G P A PP + Q G+ QP H
Sbjct: 503 GPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDP 562
Query: 584 PPPSSYAQPDSGSQRAPPSNY 604
++ A + + A S+Y
Sbjct: 563 SKAAAAAADPNAAWAAYYSHY 583
>UNIPROTKB|F1MX51 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GO:GO:0010628 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 OMA:NGQEGDQ EMBL:DAAA02008247
EMBL:DAAA02008246 IPI:IPI00698543 Ensembl:ENSBTAT00000011751
Uniprot:F1MX51
Length = 602
Score = 281 (104.0 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 86/253 (33%), Positives = 121/253 (47%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 237 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPDRIAQITGPPDRCQHAA 293
Query: 193 QLINDVLAEAESG---GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLVIGKGG 240
++I D+L ++G G G R R GQ G F +P K GL+IGKGG
Sbjct: 294 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 353
Query: 241 ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE--NRIR 298
ETIK++ ++GARI+ + + PP + I GT +QI+ A+QL+ E I N +
Sbjct: 354 ETIKSISQQSGARIE-LQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 412
Query: 299 NPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P G + G P P GTP P P Y PG PG P PP Y
Sbjct: 413 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAP---Y-NPGP-PGPAPH----GPP-APY 462
Query: 358 PSQPTPGGYPGNW 370
Q YP +W
Sbjct: 463 APQGWGNAYP-HW 474
Score = 218 (81.8 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 68/212 (32%), Positives = 113/212 (53%)
Query: 83 KRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGV 142
KRP +E+G D D +P +D + +P + +S+ T ++ ++P+ VG
Sbjct: 25 KRP-LEDG----DQPDAKKVAPQNDSFG----TQLPPMHQQQRSVMT-EEYKVPDGMVGF 74
Query: 143 IIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEA 202
IIG+ GE I +Q +SG KIQ+ D+ P RS L GTPE + A++L+ D++
Sbjct: 75 IIGRGGEQISRIQQESGCKIQIAPDSGG---LPERSCMLTGTPESVQSAKRLL-DIV--- 127
Query: 203 ESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLP 262
E G G S + IP +K GLV GKGGETI N + R G ++++ +
Sbjct: 128 EKGRPAPGFHHGDGPKCSSE--IMIPASKAGLV-GKGGETINNSEERAG--VKMVMIQDG 182
Query: 263 PGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
P +T ++ ++I G +++ AK++V E+I +
Sbjct: 183 PQNTGADKPLRITGDPYKVQQAKEMVLELIRD 214
Score = 193 (73.0 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 56/216 (25%), Positives = 109/216 (50%)
Query: 130 SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIA 189
S +I IP + G ++GK GETI + ++G K+ + +D + + + + + G P ++
Sbjct: 145 SSEIMIPASKAG-LVGKGGETINNSEERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQ 202
Query: 190 KAEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQA 248
+A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 203 QAKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQN 260
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQ 308
G RIQ P T+ +R QI G ++ + A +++ +++ + NP G
Sbjct: 261 DAGVRIQF----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPG-GPGPGG 315
Query: 309 QGYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
+G + R +W G PG +Q+ + ++ P G
Sbjct: 316 RG-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 346
Score = 126 (49.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 26/71 (36%), Positives = 44/71 (61%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT E ++SAK
Sbjct: 66 KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGTPESVQSAK 121
Query: 286 QLVNEVISENR 296
+L+ +++ + R
Sbjct: 122 RLL-DIVEKGR 131
Score = 84 (34.6 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 49/166 (29%), Positives = 62/166 (37%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ QQQ A G + N+ + +
Sbjct: 443 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQQQAPPDPAKTGTDPNSAAWAAYYAH 500
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGT-GQQPSPNTAS-----------YPPQGATQPS- 522
Y Q Q PP + A Q G G Q +P A Y G P+
Sbjct: 501 YYQQ--QAQPPPAAPAGAPTTTQTNGQEGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAP 558
Query: 523 YGVPPTSQSGYGSQ----VPPQSGYAGYGMPQAQKPLANPPA-YGQ 563
G PP Q Y + Q+ Y PQ P +PPA GQ
Sbjct: 559 TGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGM-P-QHPPAPQGQ 602
Score = 76 (31.8 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 33/115 (28%), Positives = 43/115 (37%)
Query: 487 PPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVP--PQSG 542
PPV G G +G P P T P G P+ Y P + +G P PQ
Sbjct: 413 PPVPHGPH-GVPGPHGPPGPPGPGT----PMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 467
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Y Q Q P +P G S A Y +QPPP++ A + +Q
Sbjct: 468 GNAYPHWQQQAP-PDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQ 521
Score = 69 (29.3 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 36/119 (30%), Positives = 45/119 (37%)
Query: 472 HTPSYGAQGDSTQAPP-PVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPS 522
H P +G G PP P MG Y G P+P+ A Y PQG P
Sbjct: 417 HGP-HGVPGP--HGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPH 473
Query: 523 YG--VPPT-SQSGYGSQVPPQSGY-AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP 577
+ PP +++G + Y A Y QAQ P A P T Q+ G G P
Sbjct: 474 WQQQAPPDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQEGDQQNP 532
Score = 64 (27.6 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 47/188 (25%), Positives = 64/188 (34%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDST-------QAPP 487
G H P G P YN A + G Y QG QAPP
Sbjct: 424 GPHGPPGPPGPGTPMGP---YNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPP 480
Query: 488 -PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG--YGSQV-PPQSGY 543
P ++ + + PP A P+ G P T+Q+ G Q P +G
Sbjct: 481 DPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAA--PA-GAPTTTQTNGQEGDQQNPAPAGQ 537
Query: 544 AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-----HSQPPPSSYAQPD-SGSQ 597
Y +A + GQ +P A GQP YS + + + YAQ G
Sbjct: 538 VDY--TKAWEEYYKK--MGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMP 593
Query: 598 RAPPSNYG 605
+ PP+ G
Sbjct: 594 QHPPAPQG 601
Score = 56 (24.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 23/74 (31%), Positives = 30/74 (40%)
Query: 298 RNPAMAG--GYSQ--QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQP 352
+NPA AG Y++ + Y + + P GAP QP Y Y Q Y + P
Sbjct: 530 QNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSP 589
Query: 353 PYGGYPSQP-TPGG 365
G P P P G
Sbjct: 590 Q--GMPQHPPAPQG 601
Score = 42 (19.8 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQ 445
YS A Y QQ YAQ S G P + GQ
Sbjct: 569 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 602
>UNIPROTKB|F1S9S5 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 EMBL:CU695021
Ensembl:ENSSSCT00000004173 Uniprot:F1S9S5
Length = 645
Score = 281 (104.0 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 86/253 (33%), Positives = 121/253 (47%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPDRIAQITGPPDRCQHAA 336
Query: 193 QLINDVLAEAESG---GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLVIGKGG 240
++I D+L ++G G G R R GQ G F +P K GL+IGKGG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 241 ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE--NRIR 298
ETIK++ ++GARI+ + + PP + I GT +QI+ A+QL+ E I N +
Sbjct: 397 ETIKSISQQSGARIE-LQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 455
Query: 299 NPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P G + G P P GTP P P Y PG PG P PP Y
Sbjct: 456 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAP---Y-NPGP-PGPAPH----GPP-APY 505
Query: 358 PSQPTPGGYPGNW 370
Q YP +W
Sbjct: 506 APQGWGNAYP-HW 517
Score = 252 (93.8 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 79/245 (32%), Positives = 126/245 (51%)
Query: 60 FQAAKRRAEQIAARLCNSVSAEA----------KRPRVENGSGGFDSADKGFSSPPSDLK 109
F+ A +RA QIAA++ KRP +E+G D D +P +D
Sbjct: 31 FKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRP-LEDG----DQPDAKKVAPQNDSF 85
Query: 110 SIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTE 169
P P+ +S+ T ++ ++P+ VG IIG+ GE I +Q +SG KIQ+ D+
Sbjct: 86 GTQLP---PMHQQQSRSVMT-EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG 141
Query: 170 ADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPN 229
P RS L GTPE + A++L+ D + E G G A + + IP
Sbjct: 142 G---LPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPGFHHGDGPGNAVQE---IMIPA 194
Query: 230 NKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVN 289
+K GLVIGKGGETIK +Q R G ++++ + P +T ++ ++I G +++ AK++V
Sbjct: 195 SKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVL 252
Query: 290 EVISE 294
E+I +
Sbjct: 253 ELIRD 257
Score = 217 (81.4 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 59/215 (27%), Positives = 112/215 (52%)
Query: 131 KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAK 190
++I IP + G++IGK GETIK LQ ++G K+ + +D + + + + + G P ++ +
Sbjct: 188 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQQ 246
Query: 191 AEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 247 AKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 304
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
G RIQ P T+ +R QI G ++ + A +++ +++ + NP G +
Sbjct: 305 AGVRIQF----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPG-GPGPGGR 359
Query: 310 GYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
G + R +W G PG +Q+ + ++ P G
Sbjct: 360 G-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 389
Score = 136 (52.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT E ++SAK
Sbjct: 106 KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGTPESVQSAK 161
Query: 286 QLVNEVISENR 296
+L+++++ + R
Sbjct: 162 RLLDQIVEKGR 172
Score = 84 (34.6 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 49/166 (29%), Positives = 62/166 (37%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ QQQ A G + N+ + +
Sbjct: 486 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQQQAPPDPAKTGTDPNSAAWAAYYAH 543
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGT-GQQPSPNTAS-----------YPPQGATQPS- 522
Y Q Q PP + A Q G G Q +P A Y G P+
Sbjct: 544 YYQQ--QAQPPPAAPAGAPTTTQTNGQEGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAP 601
Query: 523 YGVPPTSQSGYGSQ----VPPQSGYAGYGMPQAQKPLANPPA-YGQ 563
G PP Q Y + Q+ Y PQ P +PPA GQ
Sbjct: 602 TGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGM-P-QHPPAPQGQ 645
Score = 76 (31.8 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 33/115 (28%), Positives = 43/115 (37%)
Query: 487 PPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVP--PQSG 542
PPV G G +G P P T P G P+ Y P + +G P PQ
Sbjct: 456 PPVPHGPH-GVPGPHGPPGPPGPGT----PMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 510
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Y Q Q P +P G S A Y +QPPP++ A + +Q
Sbjct: 511 GNAYPHWQQQAP-PDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQ 564
Score = 69 (29.3 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 36/119 (30%), Positives = 45/119 (37%)
Query: 472 HTPSYGAQGDSTQAPP-PVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPS 522
H P +G G PP P MG Y G P+P+ A Y PQG P
Sbjct: 460 HGP-HGVPGP--HGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPH 516
Query: 523 YG--VPPT-SQSGYGSQVPPQSGY-AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP 577
+ PP +++G + Y A Y QAQ P A P T Q+ G G P
Sbjct: 517 WQQQAPPDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQEGDQQNP 575
Score = 64 (27.6 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 47/188 (25%), Positives = 64/188 (34%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDST-------QAPP 487
G H P G P YN A + G Y QG QAPP
Sbjct: 467 GPHGPPGPPGPGTPMGP---YNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPP 523
Query: 488 -PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG--YGSQV-PPQSGY 543
P ++ + + PP A P+ G P T+Q+ G Q P +G
Sbjct: 524 DPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAA--PA-GAPTTTQTNGQEGDQQNPAPAGQ 580
Query: 544 AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-----HSQPPPSSYAQPD-SGSQ 597
Y +A + GQ +P A GQP YS + + + YAQ G
Sbjct: 581 VDY--TKAWEEYYKK--MGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMP 636
Query: 598 RAPPSNYG 605
+ PP+ G
Sbjct: 637 QHPPAPQG 644
Score = 56 (24.8 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 23/74 (31%), Positives = 30/74 (40%)
Query: 298 RNPAMAG--GYSQ--QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQP 352
+NPA AG Y++ + Y + + P GAP QP Y Y Q Y + P
Sbjct: 573 QNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSP 632
Query: 353 PYGGYPSQP-TPGG 365
G P P P G
Sbjct: 633 Q--GMPQHPPAPQG 644
Score = 42 (19.8 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQ 445
YS A Y QQ YAQ S G P + GQ
Sbjct: 612 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 645
>UNIPROTKB|E2RJQ2 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 OMA:NGQEGDQ EMBL:AAEX03004886
Ensembl:ENSCAFT00000032426 Uniprot:E2RJQ2
Length = 668
Score = 281 (104.0 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 86/253 (33%), Positives = 121/253 (47%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 303 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPDRIAQITGPPDRCQHAA 359
Query: 193 QLINDVLAEAESG---GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLVIGKGG 240
++I D+L ++G G G R R GQ G F +P K GL+IGKGG
Sbjct: 360 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 419
Query: 241 ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE--NRIR 298
ETIK++ ++GARI+ + + PP + I GT +QI+ A+QL+ E I N +
Sbjct: 420 ETIKSISQQSGARIE-LQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 478
Query: 299 NPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P G + G P P GTP P P Y PG PG P PP Y
Sbjct: 479 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAP---Y-NPGP-PGPAPH----GPP-APY 528
Query: 358 PSQPTPGGYPGNW 370
Q YP +W
Sbjct: 529 APQGWGNAYP-HW 540
Score = 248 (92.4 bits), Expect = 9.6e-22, Sum P(2) = 9.6e-22
Identities = 82/261 (31%), Positives = 130/261 (49%)
Query: 55 DEFQD-FQAAKRRAEQIAARLCNSVSAE------AKRPRVENGSGGF---DSADKGFSSP 104
D F+D Q A++ A +I S+++ KRP + G G S+ +
Sbjct: 29 DAFKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRPLEDGGVDGSWTSPSSTTHWEGM 88
Query: 105 PSDLKSIP-APSAIPV--SYGG-----YQSMGTS---KKIEIPNIRVGVIIGKSGETIKY 153
PS K P A P S+G +Q S ++ ++P+ VG IIG+ GE I
Sbjct: 89 PSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISR 148
Query: 154 LQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARR 213
+Q +SG KIQ+ D+ P RS L GTPE + A++L+ D + E G
Sbjct: 149 IQQESGCKIQIAPDSGG---LPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPGFHHGD 204
Query: 214 LTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQ 273
G A + + IP +K GLVIGKGGETIK +Q R G ++++ + P +T ++ ++
Sbjct: 205 GPGNAVQE---IMIPASKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLR 259
Query: 274 IDGTSEQIESAKQLVNEVISE 294
I G +++ AK++V E+I +
Sbjct: 260 ITGDPYKVQQAKEMVLELIRD 280
Score = 217 (81.4 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 59/215 (27%), Positives = 112/215 (52%)
Query: 131 KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAK 190
++I IP + G++IGK GETIK LQ ++G K+ + +D + + + + + G P ++ +
Sbjct: 211 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQQ 269
Query: 191 AEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 270 AKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 327
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
G RIQ P T+ +R QI G ++ + A +++ +++ + NP G +
Sbjct: 328 AGVRIQF----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPG-GPGPGGR 382
Query: 310 GYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
G + R +W G PG +Q+ + ++ P G
Sbjct: 383 G-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 412
Score = 141 (54.7 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 49/201 (24%), Positives = 93/201 (46%)
Query: 106 SDLKSIPAPSAIPVSYGGYQSMG----TSKKIEIPNIR--VGVIIGKSGETIKYLQLQSG 159
+D ++P PS+ GG G + K + R I G +G ++ G
Sbjct: 2 ADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYG 61
Query: 160 AKIQVTRDTEAD--LNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGI--VARRLT 215
+ + D D SP+ + G P K + V + +S G+ + + ++ +
Sbjct: 62 GQKRPLEDGGVDGSWTSPSSTTHWEGMPSPF-KDQPDAKKVAPQNDSFGTQLPPMHQQQS 120
Query: 216 GQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQID 275
++ + K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ +
Sbjct: 121 RSVMTEEY--KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLT 174
Query: 276 GTSEQIESAKQLVNEVISENR 296
GT E ++SAK+L+++++ + R
Sbjct: 175 GTPESVQSAKRLLDQIVEKGR 195
Score = 84 (34.6 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 49/166 (29%), Positives = 62/166 (37%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ QQQ A G + N+ + +
Sbjct: 509 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAH 566
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGT-GQQPSPNTAS-----------YPPQGATQPS- 522
Y Q Q PP + A Q G G Q +P A Y G P+
Sbjct: 567 YYQQ--QAQPPPAAPAGAPTTTQTNGQEGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAP 624
Query: 523 YGVPPTSQSGYGSQ----VPPQSGYAGYGMPQAQKPLANPPA-YGQ 563
G PP Q Y + Q+ Y PQ P +PPA GQ
Sbjct: 625 TGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGM-P-QHPPAPQGQ 668
Score = 76 (31.8 bits), Expect = 6.5e-21, Sum P(2) = 6.5e-21
Identities = 33/115 (28%), Positives = 43/115 (37%)
Query: 487 PPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVP--PQSG 542
PPV G G +G P P T P G P+ Y P + +G P PQ
Sbjct: 479 PPVPHGPH-GVPGPHGPPGPPGPGT----PMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 533
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Y Q Q P +P G S A Y +QPPP++ A + +Q
Sbjct: 534 GNAYPHWQQQAP-PDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQ 587
Score = 69 (29.3 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 36/119 (30%), Positives = 45/119 (37%)
Query: 472 HTPSYGAQGDSTQAPP-PVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPS 522
H P +G G PP P MG Y G P+P+ A Y PQG P
Sbjct: 483 HGP-HGVPGP--HGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPH 539
Query: 523 YG--VPPT-SQSGYGSQVPPQSGY-AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP 577
+ PP +++G + Y A Y QAQ P A P T Q+ G G P
Sbjct: 540 WQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQEGDQQNP 598
Score = 64 (27.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 47/188 (25%), Positives = 64/188 (34%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDST-------QAPP 487
G H P G P YN A + G Y QG QAPP
Sbjct: 490 GPHGPPGPPGPGTPMGP---YNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPP 546
Query: 488 -PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG--YGSQV-PPQSGY 543
P ++ + + PP A P+ G P T+Q+ G Q P +G
Sbjct: 547 DPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAA--PA-GAPTTTQTNGQEGDQQNPAPAGQ 603
Query: 544 AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-----HSQPPPSSYAQPD-SGSQ 597
Y +A + GQ +P A GQP YS + + + YAQ G
Sbjct: 604 VDY--TKAWEEYYKK--MGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMP 659
Query: 598 RAPPSNYG 605
+ PP+ G
Sbjct: 660 QHPPAPQG 667
Score = 56 (24.8 bits), Expect = 8.0e-19, Sum P(2) = 8.0e-19
Identities = 23/74 (31%), Positives = 30/74 (40%)
Query: 298 RNPAMAG--GYSQ--QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQP 352
+NPA AG Y++ + Y + + P GAP QP Y Y Q Y + P
Sbjct: 596 QNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSP 655
Query: 353 PYGGYPSQP-TPGG 365
G P P P G
Sbjct: 656 Q--GMPQHPPAPQG 667
Score = 42 (19.8 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQ 445
YS A Y QQ YAQ S G P + GQ
Sbjct: 635 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 668
>UNIPROTKB|Q8UVD9 [details] [associations]
symbol:KHSRP "Far upstream element-binding protein 2"
species:9031 "Gallus gallus" [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0003730 "mRNA
3'-UTR binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0005737 GO:GO:0003730
GO:GO:0008298 GO:GO:0051028 HOVERGEN:HBG000625 KO:K13210
InterPro:IPR015096 Pfam:PF09005 EMBL:AF461020 IPI:IPI00589044
RefSeq:NP_989608.1 UniGene:Gga.94 ProteinModelPortal:Q8UVD9
SMR:Q8UVD9 PRIDE:Q8UVD9 GeneID:374140 KEGG:gga:374140 CTD:8570
NextBio:20813655 Uniprot:Q8UVD9
Length = 769
Score = 267 (99.0 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 68/203 (33%), Positives = 114/203 (56%)
Query: 97 ADKGFSSPPSDLKSIPAPSA-IPVSYGGY----QSMGTSKKIEIPNIRVGVIIGKSGETI 151
A++G PP+ L PSA +P G +S +++ +P+ VG+IIG+ GE I
Sbjct: 173 AERGRRPPPA-LTGGALPSAALPPQLGPMHPPPRSTTVTEEYRVPDGMVGLIIGRGGEQI 231
Query: 152 KYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVA 211
+Q SG K+Q++ D+ P RSV L G+PE + KA+ +++D+++ G G
Sbjct: 232 NKIQQDSGCKVQISPDSGG---LPERSVSLTGSPEAVQKAKLMLDDIVSRGRGGPPGQFH 288
Query: 212 RRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERT 271
GQ G+ M IP K GLVIGKGGETIK +Q R G +++I + +T+ ++
Sbjct: 289 DYANGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQERAG--VKMIFIQDGSQNTNVDKP 345
Query: 272 VQIDGTSEQIESAKQLVNEVISE 294
++I G +++ A ++V +++ E
Sbjct: 346 LRIIGDPYKVQQACEMVMDILRE 368
Score = 250 (93.1 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 90/267 (33%), Positives = 125/267 (46%)
Query: 121 YGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE 180
YG +G + +P VGV+IG+SGE IK +Q +G +IQ +D D P +
Sbjct: 380 YGS--RIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD---DGTGPEKIAH 434
Query: 181 LMGTPEQIAKAEQLINDVLAEAESG-----GSGIV--AR-RLTGQA--G--SDHFAMKIP 228
+MG PE+ A ++IND+L SG G G+ R R GQ G IP
Sbjct: 435 IMGPPERCEHAARIINDLLQSLRSGPPGPPGHGMPPGGRGRGRGQGIWGPPGGEMTFSIP 494
Query: 229 NNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPP-GDTSTERTVQIDGTSEQIESAKQL 287
+K GLVIG+GGE +K + + GA ++ I LPP GD + + + I G+ +QIE AKQ
Sbjct: 495 THKCGLVIGRGGENVKAINQQRGAFVE-ISRQLPPNGDPNFKLFI-IRGSPQQIEHAKQP 552
Query: 288 VNEVISENRI----RNPAMAGGYSQQGYQA--RP-PTSWGTPGAPSMQQPGYGYVQPGAY 340
+ E I E + P G G P P + G PG P P + Y P +
Sbjct: 553 IEEKI-EGPLCPVGPGPGPGGPPGPAGPMGPFNPGPFNQGPPGGP----PPHQY-PPQGW 606
Query: 341 PGQTPQYNMSQPPYGGYPSQPTPGGYP 367
PQ+ QPP PS+ P
Sbjct: 607 GNTYPQW---QPPAPHDPSKAAAAADP 630
Score = 129 (50.5 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
++P+ VGL+IG+GGE I +Q +G ++Q+ P G ER+V + G+ E ++ AK
Sbjct: 214 RVPDGMVGLIIGRGGEQINKIQQDSGCKVQISP---DSGGLP-ERSVSLTGSPEAVQKAK 269
Query: 286 QLVNEVISENRIRNPAMAGGYS 307
++++++S R P Y+
Sbjct: 270 LMLDDIVSRGRGGPPGQFHDYA 291
Score = 95 (38.5 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 52/184 (28%), Positives = 66/184 (35%)
Query: 416 PPASGYNQQGQG--YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
PP Y QG G Y Q H P A P GY S Y G
Sbjct: 596 PPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAADPNAAWAGYYSH--YYQQPPGPVPGQP 653
Query: 474 PSYGA---QGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQGATQPSYGVPPT 528
P+ A QG+ Q PP QS + Y GQQP A PPQ ++
Sbjct: 654 PAPTAPPVQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAW----- 706
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ-PGYSHSQPPPS 587
+ Y Q + G G P +P + A+ + + A YGQ PG + PPP+
Sbjct: 707 -EEYYKKQAAQVATGGGPGAPPGPQPDYSA-AWAEYYRQ--QAAYYGQTPGAAGPAPPPT 762
Query: 588 SYAQ 591
Q
Sbjct: 763 QQGQ 766
Score = 86 (35.3 bits), Expect = 1.9e-24, Sum P(3) = 1.9e-24
Identities = 32/112 (28%), Positives = 42/112 (37%)
Query: 480 GDSTQAPP-PVQSSAAMGQQGYGTGQQPSPNTASYPPQG--ATQPSYGVP-PTSQSGYGS 535
G PP P + G P YPPQG T P + P P S +
Sbjct: 567 GPGPGGPPGPAGPMGPFNPGPFNQGPPGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAA 626
Query: 536 QVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPS 587
P + +AGY Q+P P GQ +P + G+P QPPP+
Sbjct: 627 AADPNAAWAGYYSHYYQQPPG--PVPGQPP-APTAPPVQGEP----PQPPPT 671
Score = 72 (30.4 bits), Expect = 5.3e-23, Sum P(3) = 5.3e-23
Identities = 23/68 (33%), Positives = 28/68 (41%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG- 365
S+ A P +W + QQP PG PGQ P + PP G P QP P G
Sbjct: 622 SKAAAAADPNAAWAGYYSHYYQQP------PGPVPGQPPA--PTAPPVQGEPPQPPPTGQ 673
Query: 366 --YPGNWD 371
Y W+
Sbjct: 674 SDYTKAWE 681
Score = 69 (29.3 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 47/167 (28%), Positives = 55/167 (32%)
Query: 460 GYGNVNNTSQEG--HTPSYGAQG-DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQ 516
G+GN Q H PS A D A S G GQ P+P TA P Q
Sbjct: 605 GWGNTYPQWQPPAPHDPSKAAAAADPNAAWAGYYSHYYQQPPGPVPGQPPAP-TAP-PVQ 662
Query: 517 GAT-QPSYGVPPTSQSGY-----------GSQ-----VPPQSGYAGYGMPQAQKPLANPP 559
G QP PPT QS Y G Q PPQ Y +K A
Sbjct: 663 GEPPQP----PPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAAQVA 718
Query: 560 AYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQ-PDSGSQRAPPSNYG 605
G PG Y + + + Y Q P + PP+ G
Sbjct: 719 TGGGPGAPPGPQPDYSAAWAEYYRQQAAYYGQTPGAAGPAPPPTQQG 765
Score = 68 (29.0 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 20/48 (41%), Positives = 21/48 (43%)
Query: 312 QARPPTSWGTPGAPSMQQPGYG------YVQPGAYPGQTPQYNMSQPP 353
QA + G PGAP QP Y Y Q AY GQTP PP
Sbjct: 713 QAAQVATGGGPGAPPGPQPDYSAAWAEYYRQQAAYYGQTPGAAGPAPP 760
Score = 54 (24.1 bits), Expect = 3.7e-21, Sum P(3) = 3.7e-21
Identities = 25/75 (33%), Positives = 29/75 (38%)
Query: 299 NPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYP--GQTPQYNMSQPPYGG 356
N A AG YS YQ P G P AP+ P G +P P GQ+ + Y
Sbjct: 631 NAAWAGYYSHY-YQQPPGPVPGQPPAPTAP-PVQG--EPPQPPPTGQSDYTKAWEEYYKK 686
Query: 357 YPSQPTPGGYPGNWD 371
QP G P D
Sbjct: 687 IGQQPQQPGAPPQQD 701
Score = 47 (21.6 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 51 PPPADEFQD-FQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGG 93
PP +D F A +RA QIAA++ + + G GG
Sbjct: 80 PPGGGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGG 123
Score = 43 (20.2 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 549 PQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDS 594
P Q P PP + Q G+ QP H ++ A P++
Sbjct: 587 PFNQGPPGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAADPNA 632
>UNIPROTKB|F1S9S9 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GO:GO:0010628 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 OMA:NGQEGDQ EMBL:CU695021
Ensembl:ENSSSCT00000004169 Uniprot:F1S9S9
Length = 708
Score = 281 (104.0 bits), Expect = 2.3e-25, Sum P(3) = 2.3e-25
Identities = 86/253 (33%), Positives = 121/253 (47%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 320 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPDRIAQITGPPDRCQHAA 376
Query: 193 QLINDVLAEAESG---GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLVIGKGG 240
++I D+L ++G G G R R GQ G F +P K GL+IGKGG
Sbjct: 377 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 436
Query: 241 ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE--NRIR 298
ETIK++ ++GARI+ + + PP + I GT +QI+ A+QL+ E I N +
Sbjct: 437 ETIKSISQQSGARIE-LQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 495
Query: 299 NPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P G + G P P GTP P P Y PG PG P PP Y
Sbjct: 496 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAP---Y-NPGP-PGPAPH----GPP-APY 545
Query: 358 PSQPTPGGYPGNW 370
Q YP +W
Sbjct: 546 APQGWGNAYP-HW 557
Score = 238 (88.8 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 58/165 (35%), Positives = 95/165 (57%)
Query: 130 SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIA 189
+++ ++P+ VG IIG+ GE I +Q +SG KIQ+ D+ P RS L GTPE +
Sbjct: 142 TEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGG---LPERSCMLTGTPESVQ 198
Query: 190 KAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++L+ D + E G G A + + IP +K GLVIGKGGETIK +Q R
Sbjct: 199 SAKRLL-DQIVEKGRPAPGFHHGDGPGNAVQE---IMIPASKAGLVIGKGGETIKQLQER 254
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
G ++++ + P +T ++ ++I G +++ AK++V E+I +
Sbjct: 255 AG--VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRD 297
Score = 217 (81.4 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 59/215 (27%), Positives = 112/215 (52%)
Query: 131 KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAK 190
++I IP + G++IGK GETIK LQ ++G K+ + +D + + + + + G P ++ +
Sbjct: 228 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQQ 286
Query: 191 AEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 287 AKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 344
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
G RIQ P T+ +R QI G ++ + A +++ +++ + NP G +
Sbjct: 345 AGVRIQF----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPG-GPGPGGR 399
Query: 310 GYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
G + R +W G PG +Q+ + ++ P G
Sbjct: 400 G-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 429
Score = 136 (52.9 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT E ++SAK
Sbjct: 146 KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGTPESVQSAK 201
Query: 286 QLVNEVISENR 296
+L+++++ + R
Sbjct: 202 RLLDQIVEKGR 212
Score = 86 (35.3 bits), Expect = 2.3e-25, Sum P(3) = 2.3e-25
Identities = 49/180 (27%), Positives = 61/180 (33%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ QQQ A G + N+ + +
Sbjct: 526 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQQQAPPDPAKTGTDPNSAAWAAYYAH 583
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGT-GQQPSPNTASYPPQGATQPSYGVPPTSQSGYG 534
Y Q Q PP + A Q G G Q +P A Y Q G
Sbjct: 584 YYQQ--QAQPPPAAPAGAPTTTQTNGQEGDQQNPAPAGQVDYTKAWEEY-YKKMGQQGQT 640
Query: 535 SQVPPQSGYAGYGMPQAQK---PLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQ 591
+ Y Q Q P PP GQ S A Y Q ++Q P Q
Sbjct: 641 QDY--SKAWEEYYKKQGQAVPAPTGAPPG-GQPDYSAAWAEYYRQQAAYYAQTSPQGMPQ 697
Score = 76 (31.8 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 33/115 (28%), Positives = 43/115 (37%)
Query: 487 PPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVP--PQSG 542
PPV G G +G P P T P G P+ Y P + +G P PQ
Sbjct: 496 PPVPHGPH-GVPGPHGPPGPPGPGT----PMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 550
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Y Q Q P +P G S A Y +QPPP++ A + +Q
Sbjct: 551 GNAYPHWQQQAP-PDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQ 604
Score = 69 (29.3 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 36/119 (30%), Positives = 45/119 (37%)
Query: 472 HTPSYGAQGDSTQAPP-PVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPS 522
H P +G G PP P MG Y G P+P+ A Y PQG P
Sbjct: 500 HGP-HGVPGP--HGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPH 556
Query: 523 YG--VPPT-SQSGYGSQVPPQSGY-AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP 577
+ PP +++G + Y A Y QAQ P A P T Q+ G G P
Sbjct: 557 WQQQAPPDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQEGDQQNP 615
Score = 62 (26.9 bits), Expect = 6.1e-18, Sum P(3) = 6.1e-18
Identities = 26/95 (27%), Positives = 36/95 (37%)
Query: 273 QIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGY 332
Q+D T E K++ + + + + A Y +QG PT GAP QP Y
Sbjct: 620 QVDYTKAWEEYYKKMGQQ--GQTQDYSKAWEEYYKKQGQAVPAPT-----GAPPGGQPDY 672
Query: 333 GYVQPGAYPGQTPQYNMSQPPYGGYPSQP-TPGGY 366
Y Q Y + P G P P P G+
Sbjct: 673 SAAWAEYYRQQAAYYAQTSPQ--GMPQHPPAPQGF 705
Score = 54 (24.1 bits), Expect = 4.0e-17, Sum P(3) = 4.0e-17
Identities = 20/81 (24%), Positives = 26/81 (32%)
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSP---GSAGGYGQPGYSHS 582
PP +G VP G G P NP Y P G Y G+ ++
Sbjct: 496 PPVPHGPHG--VPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNA 553
Query: 583 QPPPSSYAQPDSGSQRAPPSN 603
P A PD P++
Sbjct: 554 YPHWQQQAPPDPAKTGTDPNS 574
Score = 41 (19.5 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 13/29 (44%), Positives = 13/29 (44%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY--HAP 439
YS A Y QQ YAQ S G H P
Sbjct: 672 YSAAWAEYYRQQAAYYAQTSPQGMPQHPP 700
Score = 38 (18.4 bits), Expect = 2.3e-25, Sum P(3) = 2.3e-25
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 60 FQAAKRRAEQIAARL 74
F+ A +RA QIAA++
Sbjct: 31 FKDALQRARQIAAKI 45
>RGD|621828 [details] [associations]
symbol:Khsrp "KH-type splicing regulatory protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=ISO] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621828 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0043025 GO:GO:0030425
GO:GO:0006397 GO:GO:0006351 GO:GO:0003730 GO:GO:0051028
HOVERGEN:HBG000625 KO:K13210 InterPro:IPR015096 Pfam:PF09005
CTD:8570 EMBL:AF308818 IPI:IPI00200920 RefSeq:NP_598286.1
UniGene:Rn.92643 ProteinModelPortal:Q99PF5 SMR:Q99PF5
PhosphoSite:Q99PF5 REPRODUCTION-2DPAGE:Q99PF5 PRIDE:Q99PF5
GeneID:171137 KEGG:rno:171137 NextBio:621918 Genevestigator:Q99PF5
Uniprot:Q99PF5
Length = 721
Score = 273 (101.2 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
Identities = 86/280 (30%), Positives = 133/280 (47%)
Query: 24 PPSAAARRPTGFSAPDPAVAPTSYN-SVPP----PADEFQDFQAAKRRAEQIAARLCNSV 78
PP A R G P S S PP P F A +RA QIAA++
Sbjct: 34 PPGAGDRGGGGPGGGGPGGGGASGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDA 93
Query: 79 SAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGG-YQSMGTS--KKIEI 135
+ + G GG + P S K +I G + TS ++ +
Sbjct: 94 ATTVNNNTPDFGFGGQKRQLEDGDQPDSK-KLASQGDSIGSQLGPIHPPPRTSMTEEYRV 152
Query: 136 PNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLI 195
P+ VG+IIG+ GE I +Q SG K+Q++ D+ P RSV L G PE + KA+ ++
Sbjct: 153 PDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGG---LPERSVSLTGAPESVQKAKMML 209
Query: 196 NDVLAEAESGGSGIVARRLTG-QAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
+D+++ G G G Q G+ M IP K GLVIGKGGETIK +Q R G +
Sbjct: 210 DDIVSRGRGGPPGQFHDNANGGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQERAG--V 266
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
++I + +T+ ++ ++I G +++ A ++V +++ E
Sbjct: 267 KMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 306
Score = 261 (96.9 bits), Expect = 9.2e-23, Sum P(2) = 9.2e-23
Identities = 87/252 (34%), Positives = 117/252 (46%)
Query: 121 YGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE 180
YG +G + +P VGV+IG+SGE IK +Q +G +IQ +D D P +
Sbjct: 318 YGS--RVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD---DGTGPEKIAH 372
Query: 181 LMGTPEQIAKAEQLINDVLAEAESGGSGIVAR---------RLTGQAG----SDHFAMKI 227
+MG P++ A ++IND+L SG G R GQ I
Sbjct: 373 IMGPPDRCEHAARIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSI 432
Query: 228 PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPP-GDTSTERTVQIDGTSEQIESAKQ 286
P +K GLVIG+GGE +K + +TGA ++ I LPP GD + + V I G+ +QI+ AKQ
Sbjct: 433 PTHKCGLVIGRGGENVKAINQQTGAFVE-ISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQ 490
Query: 287 LVNEVISENRIRNPAMAGGYSQQGYQA--RP-PTSWGTPGAPSMQQPGYGYVQPGAYP-- 341
L+ E I GG G P P + G PGAP P G P YP
Sbjct: 491 LIEEKIEGPLCPVGPGPGGPGPAGPMGPFHPGPFNQGPPGAP----PHAGGPPPHQYPPQ 546
Query: 342 GQTPQYNMSQPP 353
G Y QPP
Sbjct: 547 GWGNTYPEWQPP 558
Score = 247 (92.0 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 64/199 (32%), Positives = 104/199 (52%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
GT ++I IP + G++IGK GETIK LQ ++G K+ + +D + N + + ++G P +
Sbjct: 234 GTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVD-KPLRIIGDPYK 292
Query: 188 IAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQ 247
+ +A +++ D+L E + GG G R G + +P + VG+VIG+ GE IK +Q
Sbjct: 293 VQQACEMVMDILRERDQGGFG--DRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQ 350
Query: 248 ARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAG--G 305
G RIQ G T E+ I G ++ E A +++N+++ R P G G
Sbjct: 351 NDAGVRIQ---FKQDDG-TGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGAPG 406
Query: 306 YSQQGY-QARPPTSWGTPG 323
G + R +WG PG
Sbjct: 407 MPPGGRGRGRGQGNWGPPG 425
Score = 133 (51.9 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 157 QSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLA-EAESGGSGIVARRLT 215
Q AKI D +N+ T G Q+ +Q + LA + +S GS +
Sbjct: 84 QIAAKIG--GDAATTVNNNTPDFGFGGQKRQLEDGDQPDSKKLASQGDSIGSQLGPIHPP 141
Query: 216 GQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQID 275
+ ++P+ VGL+IG+GGE I +Q +G ++Q+ P G ER+V +
Sbjct: 142 PRTSMTE-EYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISP---DSGGLP-ERSVSLT 196
Query: 276 GTSEQIESAKQLVNEVISENR 296
G E ++ AK ++++++S R
Sbjct: 197 GAPESVQKAKMMLDDIVSRGR 217
Score = 81 (33.6 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
Identities = 52/187 (27%), Positives = 68/187 (36%)
Query: 416 PPASGYNQQGQG--YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ---E 470
PP Y QG G Y + H P AA D + AA Y +
Sbjct: 538 PPPHQYPPQGWGNTYPEWQPPAPHDPNKA--AAAATDPNAAW--AAYYSHYYQQPPGPVP 593
Query: 471 GHTPSYGA---QGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQGATQPSYGV 525
G P+ A QG+ Q PP QS + Y GQQP A PPQ ++
Sbjct: 594 GPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGA--PPQQDYTKAW-- 649
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ-PGYSHSQP 584
+ Y Q +G G G P +P + A+ + + A YGQ PG QP
Sbjct: 650 ----EEYYKKQAQVATG-GGPGAPPGSQPDYSA-AWAEYYRQ--QAAYYGQTPGPGGPQP 701
Query: 585 PPSSYAQ 591
P + Q
Sbjct: 702 PSTQQGQ 708
Score = 75 (31.5 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 22/48 (45%), Positives = 23/48 (47%)
Query: 312 QARPPTSWGTPGAPSMQQPGYG------YVQPGAYPGQTPQYNMSQPP 353
QA+ T G PGAP QP Y Y Q AY GQTP QPP
Sbjct: 656 QAQVATGGG-PGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPP 702
Score = 68 (29.0 bits), Expect = 9.2e-23, Sum P(2) = 9.2e-23
Identities = 27/106 (25%), Positives = 38/106 (35%)
Query: 503 GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYG 562
G P+ + P Q G PP + Q PPQ G+ G P+ Q P + P
Sbjct: 509 GPGPAGPMGPFHPGPFNQGPPGAPPHAGGPPPHQYPPQ-GW-GNTYPEWQPPAPHDPNKA 566
Query: 563 QTQQSPGSAGGYGQPGYSHSQPP-------PSSYAQPDSGSQRAPP 601
+ +A + + QPP P+ A P G PP
Sbjct: 567 AAAATDPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPP 612
Score = 65 (27.9 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 20/60 (33%), Positives = 24/60 (40%)
Query: 315 PPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG---YPGNWD 371
P +W + QQP PG PG P + PP G P QP P G Y W+
Sbjct: 573 PNAAWAAYYSHYYQQP------PGPVPGPAPA--PAAPPAQGEPPQPPPTGQSDYTKAWE 624
Score = 65 (27.9 bits), Expect = 4.8e-23, Sum P(3) = 4.8e-23
Identities = 46/175 (26%), Positives = 55/175 (31%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
Y QPPA + A D + A S Y Y Q G +Q
Sbjct: 552 YPEWQPPAPHDPNKAAAAATDPNAAWAAYYSHY-----YQQPPGPVPGPAPAPAAPPAQ- 605
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTAS-----YPPQG--ATQPSY 523
G P G S + +GQQ G P + Y Q AT
Sbjct: 606 GEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGP 665
Query: 524 GVPPTSQSGYGSQ----VPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGY 574
G PP SQ Y + Q+ Y G P P PP+ Q QQ A GY
Sbjct: 666 GAPPGSQPDYSAAWAEYYRQQAAYYGQ-TPGPGGP--QPPSTQQGQQQATEANGY 717
Score = 52 (23.4 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 25/85 (29%), Positives = 34/85 (40%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSA-AGYGNVNNTSQEGHTP 474
PP Y + + Y Y +G G AP Q Y++A A Y + G TP
Sbjct: 640 PPQQDYTKAWEEY----YKKQAQVATGGGPGAPPGSQPDYSAAWAEYYR-QQAAYYGQTP 694
Query: 475 SYGA-QGDSTQAPPPVQSSAAMGQQ 498
G Q STQ Q++ A G +
Sbjct: 695 GPGGPQPPSTQQGQQ-QATEANGYE 718
Score = 46 (21.3 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
Identities = 18/50 (36%), Positives = 21/50 (42%)
Query: 322 PGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPS--QPTPGGYPGN 369
PG P P G PG + Q P PP+ G P Q P G+ GN
Sbjct: 507 PGGPGPAGP-MGPFHPGPF-NQGPP---GAPPHAGGPPPHQYPPQGW-GN 550
Score = 43 (20.2 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 19/81 (23%), Positives = 26/81 (32%)
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
G P G P G G P A PP + Q G+ QP H
Sbjct: 504 GPGPGGPGPAGPMGPFHPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPEWQPPAPHDP 563
Query: 584 PPPSSYAQPDSGSQRAPPSNY 604
++ A + + A S+Y
Sbjct: 564 NKAAAAATDPNAAWAAYYSHY 584
>UNIPROTKB|E1BX03 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0010628 "positive regulation of gene
expression" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GO:GO:0010628 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 OMA:NGQEGDQ EMBL:AADN02012752
IPI:IPI00679838 Ensembl:ENSGALT00000014525 ArrayExpress:E1BX03
Uniprot:E1BX03
Length = 645
Score = 268 (99.4 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 83/252 (32%), Positives = 118/252 (46%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G P++ A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPDRIAQITGPPDRCQHAA 335
Query: 193 QLINDVLAEAESG---GSGIVARRLTGQA----------GSDHFAMKIPNNKVGLVIGKG 239
++I D+L ++G G G R G+ G F +P K GL+IGKG
Sbjct: 336 EIITDLLRSVQAGNPGGPGGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKG 395
Query: 240 GETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRN 299
GETIK++ ++GARI+ + + PP + I GT +QI+ A+QL+ E I + N
Sbjct: 396 GETIKSISQQSGARIE-LQRNPPPNADPNMKMFTIRGTPQQIDYARQLIEEKIG-GPV-N 452
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAY-PGQTPQYNMSQPPYGGYP 358
P G G P G PG P P G P Y PG P PP Y
Sbjct: 453 PL--GPPVPHGPHGVVPGPHGPPGPPGPGAP-MGPYNPAPYNPGP-PGPAPHGPP-APYA 507
Query: 359 SQPTPGGYPGNW 370
Q YP +W
Sbjct: 508 PQGWGNAYP-HW 518
Score = 255 (94.8 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 83/266 (31%), Positives = 134/266 (50%)
Query: 47 YNSVPPPADE-----------FQD-FQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGF 94
Y++VPPPA D F+ A +RA QIAA++ + G GG
Sbjct: 4 YSTVPPPASGAPGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSMNSN--DYGYGGQ 61
Query: 95 DSADKGFSSPPSDLKSIPAP------SAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSG 148
+ P D K + AP + +P + +S+ T ++ ++P+ VG IIG+ G
Sbjct: 62 KRPLEDGDQP--DAKKV-APQNDSFGNQLPPMHQQQRSVMT-EEYKVPDGMVGFIIGRGG 117
Query: 149 ETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSG 208
E I +Q +SG KIQ+ ++ P RS L GTPE + A++L+ D + E G
Sbjct: 118 EQISRIQQESGCKIQIAPALDSG-GLPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPG 175
Query: 209 IVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTST 268
G A + + IP +K GLVIGKGGETIK +Q R G ++++ + P +T
Sbjct: 176 FHHGDGPGNAVQE---IMIPASKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGA 230
Query: 269 ERTVQIDGTSEQIESAKQLVNEVISE 294
++ ++I G +++ AK++V E+I +
Sbjct: 231 DKPLRITGDPYKVQQAKEMVLELIRD 256
Score = 230 (86.0 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 60/215 (27%), Positives = 113/215 (52%)
Query: 131 KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAK 190
++I IP + G++IGK GETIK LQ ++G K+ + +D + + + + + G P ++ +
Sbjct: 187 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD-KPLRITGDPYKVQQ 245
Query: 191 AEQLINDVLAEAESGGSGIVARRLTGQ-AGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A++++ +++ + GG V + G++ + IP VG+VIG+ GE IK +Q
Sbjct: 246 AKEMVLELIRD--QGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 303
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
G RIQ P T+ +R QI G ++ + A +++ +++ + NP GG +
Sbjct: 304 AGVRIQF----KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGGPGGR 359
Query: 310 GYQARPPTSW--GTPGAPSMQQPGYGYVQPGAYPG 342
G + R +W G PG +Q+ + ++ P G
Sbjct: 360 G-RGRGQGNWNMGPPGG--LQE--FNFIVPTGKTG 389
Score = 143 (55.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/71 (38%), Positives = 46/71 (64%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +Q +G +IQ+ P L G ER+ + GT E ++SAK
Sbjct: 103 KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPA-LDSGGLP-ERSCMLTGTPESVQSAK 160
Query: 286 QLVNEVISENR 296
+L+++++ + R
Sbjct: 161 RLLDQIVEKGR 171
Score = 78 (32.5 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 46/165 (27%), Positives = 58/165 (35%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ Q G + N+ + +
Sbjct: 487 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQPPNPPDPGKPGTDPNSAAWAAYYAH 544
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTAS-----------YPPQGATQPS-Y 523
Y Q Q PP Q G G QP+P A Y G P+
Sbjct: 545 YYQQ--QAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTKAWEEYYKKMGQAVPAPA 602
Query: 524 GVPPTSQSGYGSQ----VPPQSGYAGYGMPQAQKPLANPPA-YGQ 563
G PP Q Y + Q+ Y PQ P +PPA GQ
Sbjct: 603 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGM-P-QHPPAPQGQ 645
Score = 73 (30.8 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 34/110 (30%), Positives = 40/110 (36%)
Query: 472 HTPSYGAQGDSTQAPPPVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPSY 523
H P +G P P A MG Y G P+P+ A Y PQG P +
Sbjct: 460 HGP-HGVVPGPHGPPGPPGPGAPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHW 518
Query: 524 GVPPTSQSGYGSQVPPQSG----YAGYGMPQAQKPLANPPAYGQTQQSPG 569
P G P + YA Y QAQ P A PP T Q+ G
Sbjct: 519 QPPNPPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNG 568
Score = 70 (29.7 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 50/186 (26%), Positives = 65/186 (34%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAP---PPVQS 491
G H P G AP YN A + G Y QG P PP +
Sbjct: 468 GPHGPPGPPGPGAPMGP---YNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPP--N 522
Query: 492 SAAMGQQGYGTGQQP-SPNTASYPPQGATQPSY---GVPPTSQS-GYGSQV-PPQSGYAG 545
G+ G + A Y Q A P G P T+Q+ G G Q P +G
Sbjct: 523 PPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVD 582
Query: 546 YGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-----HSQPPPSSYAQPD-SGSQRA 599
Y +A + GQ +P A GQP YS + + + YAQ G +
Sbjct: 583 Y--TKAWEEYYKK--MGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQH 638
Query: 600 PPSNYG 605
PP+ G
Sbjct: 639 PPAPQG 644
Score = 62 (26.9 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 23/65 (35%), Positives = 27/65 (41%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ--PT 362
Y QQ QA+PP + PG P+ Q G G QP P Y + Y Q P
Sbjct: 545 YYQQ--QAQPPPA-APPGGPATTQTNGQGD-QPNPAPAGQVDYTKAWEEYYKKMGQAVPA 600
Query: 363 PGGYP 367
P G P
Sbjct: 601 PAGAP 605
Score = 55 (24.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 17/54 (31%), Positives = 21/54 (38%)
Query: 554 PLANPPAYGQTQQSPGSAGGYGQPGYSHSQPP--PSSYAQ-PDSGSQRAPPSNY 604
PL P +G PG G G PG P P+ Y P + PP+ Y
Sbjct: 453 PLGPPVPHGPHGVVPGPHGPPGPPGPGAPMGPYNPAPYNPGPPGPAPHGPPAPY 506
Score = 55 (24.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 23/73 (31%), Positives = 29/73 (39%)
Query: 299 NPAMAG--GYSQ--QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP 353
NPA AG Y++ + Y + + P GAP QP Y Y Q Y + P
Sbjct: 574 NPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQ 633
Query: 354 YGGYPSQP-TPGG 365
G P P P G
Sbjct: 634 --GMPQHPPAPQG 644
Score = 42 (19.8 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQ 445
YS A Y QQ YAQ S G P + GQ
Sbjct: 612 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 645
>UNIPROTKB|F1NV59 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 EMBL:AADN02012752 IPI:IPI00579990
Ensembl:ENSGALT00000014526 ArrayExpress:F1NV59 Uniprot:F1NV59
Length = 632
Score = 257 (95.5 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 84/265 (31%), Positives = 122/265 (46%)
Query: 125 QSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGT 184
+ G +++ IP VG++IG++GE IK +Q +G +IQ D D +P R ++ G
Sbjct: 253 RDQGGFREVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGTTPDRIAQITGP 309
Query: 185 PEQIAKAEQLINDVLAEAESG---GSGIVARRLTGQA----------GSDHFAMKIPNNK 231
P++ A ++I D+L ++G G G R G+ G F +P K
Sbjct: 310 PDRCQHAAEIITDLLRSVQAGNPGGPGGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGK 369
Query: 232 VGLVIGKG-----GETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
GL+IGKG GETIK++ ++GARI+ + + PP + I GT +QI+ A+Q
Sbjct: 370 TGLIIGKGNVSLRGETIKSISQQSGARIE-LQRNPPPNADPNMKMFTIRGTPQQIDYARQ 428
Query: 287 LVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAY-PGQTP 345
L+ E I + NP G G P G PG P P G P Y PG P
Sbjct: 429 LIEEKIG-GPV-NPL--GPPVPHGPHGVVPGPHGPPGPPGPGAP-MGPYNPAPYNPGP-P 482
Query: 346 QYNMSQPPYGGYPSQPTPGGYPGNW 370
PP Y Q YP +W
Sbjct: 483 GPAPHGPP-APYAPQGWGNAYP-HW 505
Score = 257 (95.5 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 84/266 (31%), Positives = 134/266 (50%)
Query: 47 YNSVPPPADE-----------FQD-FQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGF 94
Y++VPPPA D F+ A +RA QIAA++ + G GG
Sbjct: 4 YSTVPPPASGAPGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSMNSN--DYGYGGQ 61
Query: 95 DSADKGFSSPPSDLKSIPAP------SAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSG 148
+ P D K + AP + +P + +S+ T ++ ++P+ VG IIG+ G
Sbjct: 62 KRPLEDGDQP--DAKKV-APQNDSFGNQLPPMHQQQRSVMT-EEYKVPDGMVGFIIGRGG 117
Query: 149 ETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSG 208
E I +Q +SG KIQ+ D+ P RS L GTPE + A++L+ D + E G
Sbjct: 118 EQISRIQQESGCKIQIAPDSGG---LPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPG 173
Query: 209 IVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTST 268
G A + + IP +K GLVIGKGGETIK +Q R G ++++ + P +T
Sbjct: 174 FHHGDGPGNAVQE---IMIPASKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGA 228
Query: 269 ERTVQIDGTSEQIESAKQLVNEVISE 294
++ ++I G +++ AK++V E+I +
Sbjct: 229 DKPLRITGDPYKVQQAKEMVLELIRD 254
Score = 136 (52.9 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT E ++SAK
Sbjct: 103 KVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGTPESVQSAK 158
Query: 286 QLVNEVISENR 296
+L+++++ + R
Sbjct: 159 RLLDQIVEKGR 169
Score = 78 (32.5 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 46/165 (27%), Positives = 58/165 (35%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG-NVNNTSQEGHTPS 475
PA YN G A +APQ G+G A P+ Q G + N+ + +
Sbjct: 474 PAP-YNPGPPGPAPHGPPAPYAPQ-GWGNAYPHWQPPNPPDPGKPGTDPNSAAWAAYYAH 531
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTAS-----------YPPQGATQPS-Y 523
Y Q Q PP Q G G QP+P A Y G P+
Sbjct: 532 YYQQ--QAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTKAWEEYYKKMGQAVPAPA 589
Query: 524 GVPPTSQSGYGSQ----VPPQSGYAGYGMPQAQKPLANPPA-YGQ 563
G PP Q Y + Q+ Y PQ P +PPA GQ
Sbjct: 590 GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGM-P-QHPPAPQGQ 632
Score = 73 (30.8 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 34/110 (30%), Positives = 40/110 (36%)
Query: 472 HTPSYGAQGDSTQAPPPVQSSAAMGQQG---YGTGQQ-PSPN--TASYPPQG--ATQPSY 523
H P +G P P A MG Y G P+P+ A Y PQG P +
Sbjct: 447 HGP-HGVVPGPHGPPGPPGPGAPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHW 505
Query: 524 GVPPTSQSGYGSQVPPQSG----YAGYGMPQAQKPLANPPAYGQTQQSPG 569
P G P + YA Y QAQ P A PP T Q+ G
Sbjct: 506 QPPNPPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNG 555
Score = 70 (29.7 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 50/186 (26%), Positives = 65/186 (34%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAP---PPVQS 491
G H P G AP YN A + G Y QG P PP +
Sbjct: 455 GPHGPPGPPGPGAPMGP---YNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPP--N 509
Query: 492 SAAMGQQGYGTGQQP-SPNTASYPPQGATQPSY---GVPPTSQS-GYGSQV-PPQSGYAG 545
G+ G + A Y Q A P G P T+Q+ G G Q P +G
Sbjct: 510 PPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVD 569
Query: 546 YGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-----HSQPPPSSYAQPD-SGSQRA 599
Y +A + GQ +P A GQP YS + + + YAQ G +
Sbjct: 570 Y--TKAWEEYYKK--MGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQH 625
Query: 600 PPSNYG 605
PP+ G
Sbjct: 626 PPAPQG 631
Score = 62 (26.9 bits), Expect = 8.1e-21, Sum P(3) = 8.1e-21
Identities = 23/65 (35%), Positives = 27/65 (41%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ--PT 362
Y QQ QA+PP + PG P+ Q G G QP P Y + Y Q P
Sbjct: 532 YYQQ--QAQPPPA-APPGGPATTQTNGQGD-QPNPAPAGQVDYTKAWEEYYKKMGQAVPA 587
Query: 363 PGGYP 367
P G P
Sbjct: 588 PAGAP 592
Score = 55 (24.4 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
Identities = 17/54 (31%), Positives = 21/54 (38%)
Query: 554 PLANPPAYGQTQQSPGSAGGYGQPGYSHSQPP--PSSYAQ-PDSGSQRAPPSNY 604
PL P +G PG G G PG P P+ Y P + PP+ Y
Sbjct: 440 PLGPPVPHGPHGVVPGPHGPPGPPGPGAPMGPYNPAPYNPGPPGPAPHGPPAPY 493
Score = 55 (24.4 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
Identities = 23/73 (31%), Positives = 29/73 (39%)
Query: 299 NPAMAG--GYSQ--QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP 353
NPA AG Y++ + Y + + P GAP QP Y Y Q Y + P
Sbjct: 561 NPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQ 620
Query: 354 YGGYPSQP-TPGG 365
G P P P G
Sbjct: 621 --GMPQHPPAPQG 631
Score = 42 (19.8 bits), Expect = 8.1e-21, Sum P(3) = 8.1e-21
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQ 445
YS A Y QQ YAQ S G P + GQ
Sbjct: 599 YSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 632
>UNIPROTKB|F1S0X8 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0006351 GO:GO:0003723
GeneTree:ENSGT00650000093048 OMA:AAPHQNT EMBL:CU914779
Ensembl:ENSSSCT00000006271 Uniprot:F1S0X8
Length = 548
Score = 254 (94.5 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 73/245 (29%), Positives = 127/245 (51%)
Query: 52 PPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSI 111
P + + F A R QIAA++ +S+ P + N + D + G+ ++
Sbjct: 11 PVGMKAEGFVDALHRVRQIAAKI-DSI------PHLNNSTPLVDPSVYGYG-----VQKR 58
Query: 112 PAPSAIPVSYGG--YQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTE 169
P + G +Q +++ ++P+ VG IIG+ GE I +Q +SG KIQ+ ++
Sbjct: 59 PLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESS 118
Query: 170 ADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPN 229
P R L GTPE I +A++L+ ++ +G G + G + + IP
Sbjct: 119 G---IPERPCVLTGTPESIEQAKRLLGQIVDRCRNG-PGF-HNDVDGSSTIQE--LLIPA 171
Query: 230 NKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVN 289
+KVGLVIGKGGETIK +Q RTG ++++ + P T ++ ++I G +++ A+++V
Sbjct: 172 SKVGLVIGKGGETIKQLQERTG--VKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVL 229
Query: 290 EVISE 294
E+I E
Sbjct: 230 EIIRE 234
Score = 247 (92.0 bits), Expect = 7.8e-18, P = 7.8e-18
Identities = 74/255 (29%), Positives = 123/255 (48%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
G S ++ +P VG++IG++GE IK +Q +G +IQ D D SP R+ ++MG P++
Sbjct: 253 GGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGISPERAAQVMGPPDR 309
Query: 188 IAKAEQLINDVL--AEAESGGSGIVARRLTGQAGSD----------HFAMKIPNNKVGLV 235
A +I++++ A+ G G+ R G+ D +P +K GLV
Sbjct: 310 CQHAAHVISELILTAQERDGFGGLAVARGRGRGRGDWSVGTPGGIQEITYTVPADKCGLV 369
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGGE IK++ ++GA ++ + + PP R I G +QIE A+ L++E + +
Sbjct: 370 IGKGGENIKSINQQSGAHVE-LQRNPPPNTDPGLRVFTIRGVPQQIEVARHLIDEKVGGS 428
Query: 296 RIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG 355
+ P G + Q + ++PP AP Q + G +P + N + P+G
Sbjct: 429 GLGAP---GAFGQSPF-SQPPA------AP--HQNTFPPRSSGCFPNIAAKVNGN--PHG 474
Query: 356 GYPSQPTPGGYPGNW 370
S P P W
Sbjct: 475 APVSGP-PAFLTQGW 488
Score = 223 (83.6 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 58/208 (27%), Positives = 103/208 (49%)
Query: 118 PVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTR 177
P + T +++ IP +VG++IGK GETIK LQ ++G K+ + +D + +
Sbjct: 152 PGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGAD-K 210
Query: 178 SVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIG 237
+ + G P ++ +A +++ +++ E + V + + G + +P VG+VIG
Sbjct: 211 PLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFSSRMGGGSIEVSVPRFAVGIVIG 270
Query: 238 KGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRI 297
+ GE IK +Q G RIQ P S ER Q+ G ++ + A +++E+I +
Sbjct: 271 RNGEMIKKIQNDAGVRIQF----KPDDGISPERAAQVMGPPDRCQHAAHVISELILTAQE 326
Query: 298 RNPAMAGGYSQQGYQARPPTSW--GTPG 323
R+ GG + + R W GTPG
Sbjct: 327 RDGF--GGLAVARGRGRGRGDWSVGTPG 352
Score = 127 (49.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +QA +G +IQ+ ER + GT E IE AK
Sbjct: 83 KVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS----ESSGIPERPCVLTGTPESIEQAK 138
Query: 286 QLVNEVISENRIRN 299
+L+ +++ +R RN
Sbjct: 139 RLLGQIV--DRCRN 150
Score = 123 (48.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 123 GYQSMGTSKKIE-----IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTR 177
G S+GT I+ +P + G++IGK GE IK + QSGA +++ R+ + + R
Sbjct: 344 GDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGLR 403
Query: 178 SVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQA 218
+ G P+QI A LI++ + GGSG+ A GQ+
Sbjct: 404 VFTIRGVPQQIEVARHLIDEKV-----GGSGLGAPGAFGQS 439
Score = 75 (31.5 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 33/122 (27%), Positives = 47/122 (38%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAA 494
G AP +GQ+ P+ Q AA + N G P+ A+ + PV A
Sbjct: 429 GLGAP-GAFGQS-PFSQPP----AAPHQNTFPPRSSGCFPNIAAKVNGNPHGAPVSGPPA 482
Query: 495 MGQQGYGTG----QQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQ 550
QG+G+ QQP+ S+ A Q S PP + Q + G + Q
Sbjct: 483 FLTQGWGSTYQAWQQPAQQVPSHAASAAPQASS--PPDYTMAWAEYYRQQVAFYGQTLGQ 540
Query: 551 AQ 552
AQ
Sbjct: 541 AQ 542
Score = 39 (18.8 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 569 GSAGGYGQPGYSHSQPPPSSY 589
G+ G +GQ +S QPP + +
Sbjct: 431 GAPGAFGQSPFS--QPPAAPH 449
>RGD|1307004 [details] [associations]
symbol:Fubp3 "far upstream element (FUSE) binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=ISO] [GO:0010628 "positive
regulation of gene expression" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1307004 GO:GO:0003723 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210
InterPro:IPR015096 Pfam:PF09005 CTD:8939 OrthoDB:EOG4X97H1
EMBL:DQ144645 IPI:IPI00394110 RefSeq:NP_001034426.1
UniGene:Rn.199412 ProteinModelPortal:Q2QC85 SMR:Q2QC85
GeneID:362106 KEGG:rno:362106 UCSC:RGD:1307004 InParanoid:Q2QC85
NextBio:678673 Genevestigator:Q2QC85 Uniprot:Q2QC85
Length = 569
Score = 261 (96.9 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 73/239 (30%), Positives = 126/239 (52%)
Query: 58 QDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAI 117
+DF A R QIAA++ +S+ P + N + D + G+ ++ P +
Sbjct: 17 EDFVDALHRVRQIAAKI-DSI------PHLNNSTPLVDPSVYGYG-----VQKRPLDDGV 64
Query: 118 PVSYGG--YQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSP 175
G +Q +++ ++P+ VG IIG+ GE I +Q +SG KIQ+ ++ P
Sbjct: 65 GNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSG---IP 121
Query: 176 TRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLV 235
R L GTPE I +A++L+ ++ +G G + G + + IP +KVGLV
Sbjct: 122 ERPCVLTGTPESIEQAKRLLGQIVDRCRNG-PGF-HNDIDGNSTIQE--LLIPASKVGLV 177
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
IGKGGETIK +Q RTG ++++ + P T ++ ++I G +++ A+++V E+I E
Sbjct: 178 IGKGGETIKQLQERTG--VKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 246 (91.7 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 61/197 (30%), Positives = 104/197 (52%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
T +++ IP +VG++IGK GETIK LQ ++G K+ + +D + + + + G P ++
Sbjct: 163 TIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGAD-KPLRITGDPFKV 221
Query: 189 AKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQA 248
+A +++ +++ E + V T +AG + +P VG+VIG+ GE IK +Q
Sbjct: 222 QQAREMVLEIIREKDQADFRGVRSDFTSRAGGGSIEVSVPRFVVGIVIGRNGEMIKKIQN 281
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQ 308
TG RIQ P S ER Q+ G ++ + A +++NE+I + R + GG +
Sbjct: 282 GTGVRIQF----KPDDGISPERAAQVMGPPDRCQHAARIINELILTAQERE--ILGGLTG 335
Query: 309 QGYQARPPTSW--GTPG 323
+ R W GTPG
Sbjct: 336 TRGRGRGRGDWSVGTPG 352
Score = 239 (89.2 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 73/238 (30%), Positives = 116/238 (48%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
G S ++ +P VG++IG++GE IK +Q +G +IQ D D SP R+ ++MG P++
Sbjct: 253 GGSIEVSVPRFVVGIVIGRNGEMIKKIQNGTGVRIQFKPD---DGISPERAAQVMGPPDR 309
Query: 188 IAKAEQLINDVLAEAES----GG-SGIVAR-RLTGQ------AGSDHFAMKIPNNKVGLV 235
A ++IN+++ A+ GG +G R R G G +P +K GLV
Sbjct: 310 CQHAARIINELILTAQEREILGGLTGTRGRGRGRGDWSVGTPGGIQEITYTVPADKCGLV 369
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGGE IK++ ++GA ++ + + PP R I G +QIE A+ L++E +
Sbjct: 370 IGKGGENIKSINQQSGAHVE-LQRNPPPNTDPNLRIFTIRGAPQQIEVARHLIDEKVGGA 428
Query: 296 RIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP 353
+ P G Q ++PP + P P + P TP +S PP
Sbjct: 429 SLGAPTAFG----QSPFSQPPAAPHQNTFPPRAFPNIA-AKVNGNPHSTP---VSGPP 478
Score = 127 (49.8 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +QA +G +IQ+ ER + GT E IE AK
Sbjct: 83 KVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS----ESSGIPERPCVLTGTPESIEQAK 138
Query: 286 QLVNEVISENRIRN 299
+L+ +++ +R RN
Sbjct: 139 RLLGQIV--DRCRN 150
Score = 116 (45.9 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 123 GYQSMGTSKKIE-----IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTR 177
G S+GT I+ +P + G++IGK GE IK + QSGA +++ R+ + + R
Sbjct: 344 GDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLR 403
Query: 178 SVELMGTPEQIAKAEQLINDVLAEAESG 205
+ G P+QI A LI++ + A G
Sbjct: 404 IFTIRGAPQQIEVARHLIDEKVGGASLG 431
Score = 68 (29.0 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 37/149 (24%), Positives = 56/149 (37%)
Query: 438 APQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQ 497
AP + +GQ+ P+ Q AA + NT P+ A+ + PV A
Sbjct: 432 AP-TAFGQS-PFSQPP----AAPH---QNTFPPRAFPNIAAKVNGNPHSTPVSGPPAFLT 482
Query: 498 QGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLAN 557
QG+G+ Q P +QP P S++ + G+ PQA P
Sbjct: 483 QGWGSTYQAWQQPTQQVPSQQSQPQNSQPDYSKAW--EDYYKKQGHTTSAAPQASSPPDY 540
Query: 558 PPAYGQTQQSPGSAGGYGQP---GYSHSQ 583
A+ + + A YGQ +HSQ
Sbjct: 541 TMAWAEYYRQ--QAAFYGQTLGQAQAHSQ 567
>UNIPROTKB|G3V829 [details] [associations]
symbol:Fubp3 "RCG45587" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1307004 GO:GO:0003723 EMBL:CH474001
InterPro:IPR015096 Pfam:PF09005 GeneTree:ENSGT00650000093048
EMBL:AC108321 Ensembl:ENSRNOT00000021871 Uniprot:G3V829
Length = 569
Score = 261 (96.9 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 73/239 (30%), Positives = 126/239 (52%)
Query: 58 QDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAI 117
+DF A R QIAA++ +S+ P + N + D + G+ ++ P +
Sbjct: 17 EDFVDALHRVRQIAAKI-DSI------PHLNNSTPLVDPSVYGYG-----VQKRPLDDGV 64
Query: 118 PVSYGG--YQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSP 175
G +Q +++ ++P+ VG IIG+ GE I +Q +SG KIQ+ ++ P
Sbjct: 65 GNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSG---IP 121
Query: 176 TRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLV 235
R L GTPE I +A++L+ ++ +G G + G + + IP +KVGLV
Sbjct: 122 ERPCVLTGTPESIEQAKRLLGQIVDRCRNG-PGF-HNDIDGNSTIQE--LLIPASKVGLV 177
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
IGKGGETIK +Q RTG ++++ + P T ++ ++I G +++ A+++V E+I E
Sbjct: 178 IGKGGETIKQLQERTG--VKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 241 (89.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 60/197 (30%), Positives = 103/197 (52%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
T +++ IP +VG++IGK GETIK LQ ++G K+ + +D + + + + G P ++
Sbjct: 163 TIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGAD-KPLRITGDPFKV 221
Query: 189 AKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQA 248
+A +++ +++ E + V T +AG + +P VG+VIG+ GE IK +Q
Sbjct: 222 QQAREMVLEIIREKDQADFRGVRSDFTSRAGGGSIEVSVPRFVVGIVIGRNGEMIKKIQN 281
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQ 308
G RIQ P S ER Q+ G ++ + A +++NE+I + R + GG +
Sbjct: 282 DAGVRIQF----KPDDGISPERAAQVMGPPDRCQHAARIINELILTAQERE--ILGGLTG 335
Query: 309 QGYQARPPTSW--GTPG 323
+ R W GTPG
Sbjct: 336 TRGRGRGRGDWSVGTPG 352
Score = 241 (89.9 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 73/238 (30%), Positives = 116/238 (48%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
G S ++ +P VG++IG++GE IK +Q +G +IQ D D SP R+ ++MG P++
Sbjct: 253 GGSIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGISPERAAQVMGPPDR 309
Query: 188 IAKAEQLINDVLAEAES----GG-SGIVAR-RLTGQ------AGSDHFAMKIPNNKVGLV 235
A ++IN+++ A+ GG +G R R G G +P +K GLV
Sbjct: 310 CQHAARIINELILTAQEREILGGLTGTRGRGRGRGDWSVGTPGGIQEITYTVPADKCGLV 369
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGGE IK++ ++GA ++ + + PP R I G +QIE A+ L++E +
Sbjct: 370 IGKGGENIKSINQQSGAHVE-LQRNPPPNTDPNLRIFTIRGAPQQIEVARHLIDEKVGGA 428
Query: 296 RIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP 353
+ P G Q ++PP + P P + P TP +S PP
Sbjct: 429 SLGAPTAFG----QSPFSQPPAAPHQNTFPPRAFPNIA-AKVNGNPHSTP---VSGPP 478
Score = 127 (49.8 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +QA +G +IQ+ ER + GT E IE AK
Sbjct: 83 KVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS----ESSGIPERPCVLTGTPESIEQAK 138
Query: 286 QLVNEVISENRIRN 299
+L+ +++ +R RN
Sbjct: 139 RLLGQIV--DRCRN 150
Score = 116 (45.9 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 123 GYQSMGTSKKIE-----IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTR 177
G S+GT I+ +P + G++IGK GE IK + QSGA +++ R+ + + R
Sbjct: 344 GDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLR 403
Query: 178 SVELMGTPEQIAKAEQLINDVLAEAESG 205
+ G P+QI A LI++ + A G
Sbjct: 404 IFTIRGAPQQIEVARHLIDEKVGGASLG 431
Score = 68 (29.0 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 37/149 (24%), Positives = 56/149 (37%)
Query: 438 APQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQ 497
AP + +GQ+ P+ Q AA + NT P+ A+ + PV A
Sbjct: 432 AP-TAFGQS-PFSQPP----AAPH---QNTFPPRAFPNIAAKVNGNPHSTPVSGPPAFLT 482
Query: 498 QGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLAN 557
QG+G+ Q P +QP P S++ + G+ PQA P
Sbjct: 483 QGWGSTYQAWQQPTQQVPSQQSQPQNSQPDYSKAW--EDYYKKQGHTTSAAPQASSPPDY 540
Query: 558 PPAYGQTQQSPGSAGGYGQP---GYSHSQ 583
A+ + + A YGQ +HSQ
Sbjct: 541 TMAWAEYYRQ--QAAFYGQTLGQAQAHSQ 567
>ZFIN|ZDB-GENE-030131-4357 [details] [associations]
symbol:khsrp "KH-type splicing regulatory protein"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 ZFIN:ZDB-GENE-030131-4357 GO:GO:0003723
InterPro:IPR015096 Pfam:PF09005 OMA:QASGNCH
GeneTree:ENSGT00650000093048 EMBL:AL929150 IPI:IPI00482681
Ensembl:ENSDART00000038330 ArrayExpress:F1QXP8 Bgee:F1QXP8
Uniprot:F1QXP8
Length = 666
Score = 259 (96.2 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 87/275 (31%), Positives = 134/275 (48%)
Query: 45 TSYNSVPPPADEF--------QD-FQAAKRRAEQIAARLCNSVSAEAKRPRVENG---SG 92
+ Y++VPPP +D F A +RA QIAA++ V+ P NG S
Sbjct: 2 SEYSAVPPPGPGAALGAGGLKKDAFADAVQRARQIAAKIGGDVTGP---PMSNNGGAESY 58
Query: 93 GFDSADKGFSS---PPSDLKSIPAPSAIPVSYGGY------QSMGTSKKIE---IPNIRV 140
F + + P S + +A +S G QS+ S E +P+ V
Sbjct: 59 PFPTPKRSLEDGDQPESKKMASDRDNAAALSIGAQLAALSKQSVRPSSMTEEYRVPDGMV 118
Query: 141 GVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLA 200
G+IIG+ GE I +Q SG K+Q+ D+ P RSV + G PE I KA+ +++D++
Sbjct: 119 GLIIGRGGEQINKIQQDSGCKVQIAPDSGG---LPDRSVSITGGPEAIQKAKMMLDDIV- 174
Query: 201 EAESGGSGIVARRLTGQAGSDHFA-MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
S G G GS H M IP K GL+IGKGGETIK +Q R G ++ +I
Sbjct: 175 ---SRGRGTPPSFHESTNGSGHMQEMVIPAGKAGLIIGKGGETIKQLQERAGVKMILIQ- 230
Query: 260 HLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
G + ++ ++I G +++ A+++V E++ E
Sbjct: 231 DASQGP-NMDKPLRIIGDPYKVQQAREMVQEILRE 264
Score = 216 (81.1 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 72/263 (27%), Positives = 115/263 (43%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
G +++ IP + G+IIGK GETIK LQ ++G K+ + +D N + + ++G P +
Sbjct: 192 GHMQEMVIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQGPNMD-KPLRIIGDPYK 250
Query: 188 IAKAEQLINDVLAEAESGG--SGIVARRLTGQAGSDH--------FAMKIPNNKVGLVIG 237
+ +A +++ ++L E + G R+ G G + +P + VG+VIG
Sbjct: 251 VQQAREMVQEILRERDHPGFERNEYGSRMGGGGGGGGGGGGGGGGIEVPVPRHSVGVVIG 310
Query: 238 KGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRI 297
+ GE IK +Q G RIQ P T ++ I G ++ E A ++NE++ R+
Sbjct: 311 RSGEMIKKIQNDAGVRIQF----KPDDGTGPDKIAHIMGPPDRCEHAASIINELLQSIRV 366
Query: 298 RN------PAMAGGYSQQGYQAR---PPTSWGTPGAPSM--QQPGY--GYVQPGAYPGQT 344
R P G G + R P +WG P M P + G V G
Sbjct: 367 REEGGGGPPGPPGTGMPPGGRGRGRGPGGNWGGPPGSEMTFSIPAHKCGLVI-GRGGENV 425
Query: 345 PQYNMSQPPYGGYPSQPTPGGYP 367
N + QP P G P
Sbjct: 426 KAINQQTGAFVEISRQPPPNGDP 448
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 81/283 (28%), Positives = 106/283 (37%)
Query: 216 GQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQID 275
G GS+ IP +K GLVIG+GGE +K + +TGA +++ P GD + + I
Sbjct: 399 GPPGSE-MTFSIPAHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNF-KLFTIR 456
Query: 276 GTSEQIESAKQLVNEVISENRI-------RNPAMAG--G-YSQQGYQARPPTSWGTPGAP 325
G+ +QI+ AKQL+ + I E + P AG G Y+ YQ PP G P
Sbjct: 457 GSPQQIDHAKQLIEDKI-EGPLCPVGPGPGGPGPAGPMGPYNPNPYQPGPPGGPPHGGPP 515
Query: 326 SMQQP-GYGYVQPGAYPGQTPQYNMSQPP------YGGYPSQPTPGGYPGNWDXXXXXXX 378
Q P G+G P P + P Y Y QP PG
Sbjct: 516 GGQYPQGWGNAYQQWQP-HDPSKAATDPNAAWAAYYAQYYQQPGGAAMPGQTPAAQPAAP 574
Query: 379 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQQGQGYAQDSYGGYHA 438
G + P A+G G AQ + A
Sbjct: 575 GPADQSQAAPGAAQPDYTKAWEEYYKKMAAAGGG-AAPAAAG------G-AQPAGAAAAA 626
Query: 439 PQSGYGQA-APYDQQQGYNSAAGYGNVNNT-SQEGHTPSYGAQ 479
Q+ Y A A Y +QQ AA YG T Q G TP G Q
Sbjct: 627 GQTDYSAAWAEYYRQQ----AAYYGQTGQTPGQPGATPQ-GQQ 664
Score = 154 (59.3 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 76/268 (28%), Positives = 105/268 (39%)
Query: 122 GGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVEL 181
GG G ++ +P VGV+IG+SGE IK +Q +G +IQ D D P + +
Sbjct: 287 GGGGGGGGGIEVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKPD---DGTGPDKIAHI 343
Query: 182 MGTPEQIAKAEQLINDVLAEA---ESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIG- 237
MG P++ A +IN++L E GG G TG + P G G
Sbjct: 344 MGPPDRCEHAASIINELLQSIRVREEGGGGPPGPPGTGMPPGGRGRGRGPGGNWGGPPGS 403
Query: 238 ---------KGGETI----KNMQA--RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIE 282
K G I +N++A + I PP + I G+ +QI+
Sbjct: 404 EMTFSIPAHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQID 463
Query: 283 SAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPG 342
AKQL+ E++I P G G P G P P+ QPG PG
Sbjct: 464 HAKQLI-----EDKIEGPLCPVGPGPGG--PGPAGPMG-PYNPNPYQPG----PPGG--- 508
Query: 343 QTPQYNMSQPPYGGYPSQPTPGGYPGNW 370
PP+GG P G YP W
Sbjct: 509 ---------PPHGGPPG----GQYPQGW 523
Score = 129 (50.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 40/143 (27%), Positives = 66/143 (46%)
Query: 55 DEFQDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAP 114
D+ R E AA + N + ++ R R E G GG G PP P
Sbjct: 338 DKIAHIMGPPDRCEH-AASIINEL-LQSIRVR-EEGGGG-PPGPPGTGMPPGGRGRGRGP 393
Query: 115 SAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNS 174
++GG G+ IP + G++IG+ GE +K + Q+GA ++++R + +
Sbjct: 394 GG---NWGG--PPGSEMTFSIPAHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDP 448
Query: 175 PTRSVELMGTPEQIAKAEQLIND 197
+ + G+P+QI A+QLI D
Sbjct: 449 NFKLFTIRGSPQQIDHAKQLIED 471
Score = 73 (30.8 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 44/166 (26%), Positives = 54/166 (32%)
Query: 440 QSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQG-DSTQAPPPVQ-----SSA 493
Q G P+ G G+GN Q H PS A ++ A Q A
Sbjct: 502 QPGPPGGPPHGGPPGGQYPQGWGNAYQQWQP-HDPSKAATDPNAAWAAYYAQYYQQPGGA 560
Query: 494 AM-GQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQ 552
AM GQ P P S GA QP Y + Y ++ G A
Sbjct: 561 AMPGQTPAAQPAAPGPADQSQAAPGAAQPDY---TKAWEEYYKKMAAAGGGAAPAAAGGA 617
Query: 553 KPLANPPAYGQTQQSPG-------SAGGYGQPGYSHSQPPPSSYAQ 591
+P A GQT S A YGQ G + QP + Q
Sbjct: 618 QPAGAAAAAGQTDYSAAWAEYYRQQAAYYGQTGQTPGQPGATPQGQ 663
Score = 72 (30.4 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
Identities = 47/171 (27%), Positives = 58/171 (33%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G + PP Y QG G A + H P P Y A Y +
Sbjct: 508 GPPHGGPPGGQY-PQGWGNAYQQWQP-HDPSKA--ATDPNAAWAAYY-AQYYQQPGGAAM 562
Query: 470 EGHTPSYGAQGDSTQAPPPV-QSSAAMG--QQGYGTGQQPSPNTASYPPQGATQPSYG-V 525
G TP+ AQ AP P QS AA G Q Y + + GA + G
Sbjct: 563 PGQTPA--AQ---PAAPGPADQSQAAPGAAQPDYTKAWEEYYKKMAAAGGGAAPAAAGGA 617
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ 576
P + Q + +A Y QA YGQT Q+PG G Q
Sbjct: 618 QPAGAAAAAGQTDYSAAWAEYYRQQAAY-------YGQTGQTPGQPGATPQ 661
Score = 69 (29.3 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 32/106 (30%), Positives = 39/106 (36%)
Query: 496 GQQGYGTGQQPSP-NTASYPPQGATQPSYGVPPTSQ--SGYGSQVPPQSGYAGYGMPQAQ 552
G G G P N Y P P +G PP Q G+G+ Q A
Sbjct: 483 GPGGPGPAGPMGPYNPNPYQPGPPGGPPHGGPPGGQYPQGWGNAY--QQWQPHDPSKAAT 540
Query: 553 KPLANPPAY-GQTQQSPGSAGGYGQ-PGYSHSQPPPSSYAQPDSGS 596
P A AY Q Q PG A GQ P + P P+ +Q G+
Sbjct: 541 DPNAAWAAYYAQYYQQPGGAAMPGQTPAAQPAAPGPADQSQAAPGA 586
Score = 46 (21.3 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 42/181 (23%), Positives = 59/181 (32%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP +G G+G + G + P + + G G NV +Q+
Sbjct: 377 PPGTGMPPGGRGRGRGPGGNWGGPPGSEMTFSIPAHKCGLVIGRGGENVKAINQQT---- 432
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQ-QPSPNTASYPPQGATQPSYGVPPTSQSGYG 534
GA + ++ PPP G + + SP + Q G P G G
Sbjct: 433 -GAFVEISRQPPP------NGDPNFKLFTIRGSPQQIDHAKQLIEDKIEG--PLCPVGPG 483
Query: 535 SQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA--GGYGQPGYSHSQPPPSSYAQP 592
P +G G P +P PP PG G+G Y QP S A
Sbjct: 484 PGGPGPAGPMGPYNPNPYQP--GPPGGPPHGGPPGGQYPQGWGN-AYQQWQPHDPSKAAT 540
Query: 593 D 593
D
Sbjct: 541 D 541
Score = 42 (19.8 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 558 PPAYGQTQQSPGSAG-GYGQPGYSHSQPPPS 587
PP T PG G G G PG + PP S
Sbjct: 374 PPGPPGTGMPPGGRGRGRG-PGGNWGGPPGS 403
Score = 41 (19.5 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 487 PPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
PP M G G G+ P N PP ++ ++ +P
Sbjct: 374 PPGPPGTGMPPGGRGRGRGPGGNWGG-PP--GSEMTFSIP 410
>UNIPROTKB|A6QP83 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0006351 GO:GO:0003723 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210
GeneTree:ENSGT00650000093048 CTD:8939 OMA:AAPHQNT OrthoDB:EOG4X97H1
EMBL:DAAA02032235 EMBL:DAAA02032236 EMBL:BC149198 IPI:IPI00714784
RefSeq:NP_001094687.1 UniGene:Bt.2190 SMR:A6QP83
Ensembl:ENSBTAT00000017383 GeneID:541080 KEGG:bta:541080
InParanoid:A6QP83 NextBio:20878996 Uniprot:A6QP83
Length = 572
Score = 254 (94.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 73/245 (29%), Positives = 127/245 (51%)
Query: 52 PPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSI 111
P + + F A R QIAA++ +S+ P + N + D + G+ ++
Sbjct: 11 PVGMKAEGFVDALHRVRQIAAKI-DSI------PHLNNSTPLVDPSVYGYG-----VQKR 58
Query: 112 PAPSAIPVSYGG--YQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTE 169
P + G +Q +++ ++P+ VG IIG+ GE I +Q +SG KIQ+ ++
Sbjct: 59 PLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESS 118
Query: 170 ADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPN 229
P R L GTPE I +A++L+ ++ +G G + G + + IP
Sbjct: 119 G---IPERPCVLTGTPESIEQAKRLLGQIVDRCRNG-PGF-HNDVDGNSTVQE--IPIPA 171
Query: 230 NKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVN 289
+KVGLVIGKGGETIK +Q RTG ++++ + P T ++ ++I G +++ A+++V
Sbjct: 172 SKVGLVIGKGGETIKQLQERTG--VKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVL 229
Query: 290 EVISE 294
E+I E
Sbjct: 230 EIIRE 234
Score = 242 (90.2 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 63/203 (31%), Positives = 105/203 (51%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
G S ++ +P VG++IG++GE IK +Q +G +IQ D D SP R+ ++MG P++
Sbjct: 253 GGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGISPERAAQVMGPPDR 309
Query: 188 IAKAEQLINDVL--AEAESGGSGIVARRLTGQAGSD----------HFAMKIPNNKVGLV 235
A +I++++ A+ G G+ R G+ D +P +K GLV
Sbjct: 310 CQHAAHVISELILTAQERDGFGGLAVARGRGRGRGDWSVGTPGGIQEVTYTVPADKCGLV 369
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGGE IK++ ++GA ++ + + PP R I G QIE A+ L++E +
Sbjct: 370 IGKGGENIKSINQQSGAHVE-LQRNPPPSTDPNLRIFTIRGLPPQIEVARHLIDEKVGGT 428
Query: 296 RIRNPAMAGGYSQQGYQARPPTS 318
I P G + Q + ++PP +
Sbjct: 429 SIGAP---GPFGQSPF-SQPPAA 447
Score = 226 (84.6 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 58/197 (29%), Positives = 101/197 (51%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
T ++I IP +VG++IGK GETIK LQ ++G K+ + +D + + + + G P ++
Sbjct: 163 TVQEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGAD-KPLRITGDPFKV 221
Query: 189 AKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQA 248
+A +++ +++ E + V + + G + +P VG+VIG+ GE IK +Q
Sbjct: 222 QQAREMVLEIIREKDQADFRGVRGDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQN 281
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQ 308
G RIQ P S ER Q+ G ++ + A +++E+I + R+ GG +
Sbjct: 282 DAGVRIQF----KPDDGISPERAAQVMGPPDRCQHAAHVISELILTAQERDGF--GGLAV 335
Query: 309 QGYQARPPTSW--GTPG 323
+ R W GTPG
Sbjct: 336 ARGRGRGRGDWSVGTPG 352
Score = 127 (49.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +QA +G +IQ+ ER + GT E IE AK
Sbjct: 83 KVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS----ESSGIPERPCVLTGTPESIEQAK 138
Query: 286 QLVNEVISENRIRN 299
+L+ +++ +R RN
Sbjct: 139 RLLGQIV--DRCRN 150
Score = 121 (47.7 bits), Expect = 0.00057, P = 0.00057
Identities = 57/227 (25%), Positives = 90/227 (39%)
Query: 123 GYQSMGTSKKIE-----IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTR 177
G S+GT I+ +P + G++IGK GE IK + QSGA +++ R+ + R
Sbjct: 344 GDWSVGTPGGIQEVTYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPNLR 403
Query: 178 SVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIG 237
+ G P QI A LI++ + G G + Q + P G
Sbjct: 404 IFTIRGLPPQIEVARHLIDEKVGGTSIGAPGPFGQSPFSQPPAAPHQNTFPPRSSGCFPN 463
Query: 238 KGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRI 297
+ N + A + P L G ST + Q ++Q+ S + ++ S
Sbjct: 464 IAAKVNGNPHS---APVSGPPAFLTQGWGSTYQAWQ--QPTQQVPSQQ---SQPQSSQPD 515
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQT 344
+ A Y +Q + A TP +M Y Y Q A+ GQT
Sbjct: 516 YSKAWEDYYKKQSHAASAAPQASTPPDYTMAWAEY-YRQQVAFYGQT 561
Score = 74 (31.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 38/156 (24%), Positives = 57/156 (36%)
Query: 431 DSYGGYHAPQSG-YGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPV 489
+ GG G +GQ+ P+ Q AA + N G P+ A+ + PV
Sbjct: 423 EKVGGTSIGAPGPFGQS-PFSQPP----AAPHQNTFPPRSSGCFPNIAAKVNGNPHSAPV 477
Query: 490 QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMP 549
A QG+G+ Q P +QP P S++ + QS +A P
Sbjct: 478 SGPPAFLTQGWGSTYQAWQQPTQQVPSQQSQPQSSQPDYSKA-WEDYYKKQS-HAASAAP 535
Query: 550 QAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPP 585
QA P A+ + + YGQ +Q P
Sbjct: 536 QASTPPDYTMAWAEYYRQ--QVAFYGQT-LGQAQAP 568
Score = 71 (30.1 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 36/142 (25%), Positives = 59/142 (41%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGH 472
+SQPPA+ + + + A +G +AP + + G+G+ T Q
Sbjct: 441 FSQPPAAPHQNTFPPRSSGCFPNIAAKVNGNPHSAPVSGPPAFLTQ-GWGS---TYQAWQ 496
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG 532
P+ Q S Q+ P QSS + + + + AS PQ +T P Y + + +
Sbjct: 497 QPTQ--QVPSQQSQP--QSSQPDYSKAWEDYYKKQSHAASAAPQASTPPDYTM---AWAE 549
Query: 533 YGSQVPPQSGYAGYGMPQAQKP 554
Y Q Q + G + QAQ P
Sbjct: 550 YYRQ---QVAFYGQTLGQAQAP 568
Score = 38 (18.4 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 567 SPGSAGGYGQPGYSHSQPPPSSY 589
S G+ G +GQ +S QPP + +
Sbjct: 429 SIGAPGPFGQSPFS--QPPAAPH 449
>ZFIN|ZDB-GENE-041121-12 [details] [associations]
symbol:zgc:101598 "zgc:101598" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-041121-12 GO:GO:0003723
eggNOG:NOG300923 HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210
InterPro:IPR015096 Pfam:PF09005 OrthoDB:EOG4X97H1 EMBL:BC085379
IPI:IPI00487369 RefSeq:NP_001007777.1 UniGene:Dr.76973
ProteinModelPortal:Q5RKQ3 SMR:Q5RKQ3 STRING:Q5RKQ3 GeneID:493616
KEGG:dre:493616 InParanoid:Q5RKQ3 NextBio:20865427
ArrayExpress:Q5RKQ3 Uniprot:Q5RKQ3
Length = 572
Score = 266 (98.7 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 78/241 (32%), Positives = 120/241 (49%)
Query: 127 MGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPE 186
+G+S + +P VG++IG++GE IK +Q +G +IQ D D SP R ++MG PE
Sbjct: 257 LGSSIDVAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGISPDRVAQVMGQPE 313
Query: 187 QIAKAEQLINDVL--AEAESGGSGIVARRLTGQAGSD----------HFAMKIPNNKVGL 234
+ A LIN+++ A+ G G + R G+ D IP +K GL
Sbjct: 314 RCQHAVHLINELVQTAQERDGFGGPLGPRGRGRGRGDWNIGTPGGLQEVTYTIPADKCGL 373
Query: 235 VIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
VIGKGGETIKN+ ++GA ++ + + PP RT I G+ +Q+E A+QL+++ I
Sbjct: 374 VIGKGGETIKNINQQSGAHVE-LQRNPPPNTDPNVRTFSIRGSPQQMEMARQLIDDKIGA 432
Query: 295 NRIRNPAMAGGYSQQGYQ--ARPPTSWGTPGAPSMQQPGYGYVQPGAYPG--QTPQYNMS 350
+ + GG S G + P + G + G+G P Q P +N S
Sbjct: 433 SGM------GGNSSFGLSPFTQGPATPHQNGPQTFMTGGWGTTYQTWQPQSQQDPSHNGS 486
Query: 351 Q 351
Q
Sbjct: 487 Q 487
Score = 259 (96.2 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 67/210 (31%), Positives = 118/210 (56%)
Query: 85 PRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVII 144
P + N S D++ G+++ L A + + G +++ T + ++P+ VG II
Sbjct: 42 PHMNNSSPVVDASLYGYATQKRSLDEGVA-NQLGAMVHGTRAIIT-EDFKVPDKMVGFII 99
Query: 145 GKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAES 204
G+ GE I +QL+S KIQ+ D+ ++ P L GTPE I +A++L+ ++ +
Sbjct: 100 GRGGEQITRIQLESNCKIQIAADSGGMMDRPCT---LTGTPESIEQAKRLLGQIVDRCRN 156
Query: 205 GGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
G G ++ + G + IP +KVGLVIGKGG+TIK +Q RTG +++I + P
Sbjct: 157 G-PGFHSQ-MDGSSAVQEIL--IPASKVGLVIGKGGDTIKQLQERTG--VKMIMIQDDPM 210
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVISE 294
T +++ ++I G +++ A++LV E+I E
Sbjct: 211 PTGSDKPLRISGDPYKVQQARELVVEIIRE 240
Score = 231 (86.4 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 66/216 (30%), Positives = 110/216 (50%)
Query: 123 GYQSM--GTS--KKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
G+ S G+S ++I IP +VG++IGK G+TIK LQ ++G K+ + +D S +
Sbjct: 159 GFHSQMDGSSAVQEILIPASKVGLVIGKGGDTIKQLQERTGVKMIMIQDDPMPTGSD-KP 217
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGK 238
+ + G P ++ +A +L+ +++ E + G + GS + +P VG+VIG+
Sbjct: 218 LRISGDPYKVQQARELVVEIIREKDQGDFRSGRSDFGSRLGSS-IDVAVPRFAVGIVIGR 276
Query: 239 GGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIR 298
GE IK +Q G RIQ P S +R Q+ G E+ + A L+NE++ + R
Sbjct: 277 NGEMIKKIQNDAGVRIQF----KPDDGISPDRVAQVMGQPERCQHAVHLINELVQTAQER 332
Query: 299 NPAMAGGYSQQGYQARPPTSW--GTPGAPSMQQPGY 332
+ G +G + R W GTPG +Q+ Y
Sbjct: 333 D-GFGGPLGPRG-RGRGRGDWNIGTPGG--LQEVTY 364
Score = 149 (57.5 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 59/210 (28%), Positives = 89/210 (42%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
IP + G++IGK GETIK + QSGA +++ R+ + + R+ + G+P+Q+ A QL
Sbjct: 366 IPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRTFSIRGSPQQMEMARQL 425
Query: 195 INDVLAEAESGG-SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGAR 253
I+D + + GG S T + H N + G G T + Q ++
Sbjct: 426 IDDKIGASGMGGNSSFGLSPFTQGPATPH-----QNGPQTFMTGGWGTTYQTWQPQS--- 477
Query: 254 IQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQA 313
Q P H G S + + EQ N+ S + A Y +Q A
Sbjct: 478 -QQDPSH--NGSQSGQ--MDYSKAWEQYYKKLGQQNQGQSSGPDYSKAWEEYYKKQTQAA 532
Query: 314 RPPTSWGTPGAPSMQQPGYGYVQPGAYPGQ 343
P + +P S Y Y Q GAY GQ
Sbjct: 533 GPGSQQSSPPDYSAAWVEY-YRQQGAYYGQ 561
Score = 58 (25.5 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 33/112 (29%), Positives = 41/112 (36%)
Query: 498 QGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQ--KPL 555
QG T Q P T G T ++ P SQ S QSG Y Q K L
Sbjct: 448 QGPATPHQNGPQTFMTGGWGTTYQTW--QPQSQQD-PSHNGSQSGQMDYSKAWEQYYKKL 504
Query: 556 ANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYGAA 607
GQ Q S Y + + + A P GSQ++ P +Y AA
Sbjct: 505 ------GQQNQGQSSGPDYSK-AWEEYYKKQTQAAGP--GSQQSSPPDYSAA 547
Score = 58 (25.5 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 31/118 (26%), Positives = 40/118 (33%)
Query: 444 GQAAPYDQQQGYNSAAGYGNVNNT--SQEGHTPSY-GAQ-GDSTQAPPPVQSSAAMGQQG 499
G A P+ G+G T Q PS+ G+Q G + Q +GQQ
Sbjct: 449 GPATPHQNGPQTFMTGGWGTTYQTWQPQSQQDPSHNGSQSGQMDYSKAWEQYYKKLGQQN 508
Query: 500 YGTGQQPSPNTA---SYPPQG-ATQPS--YGVPPTSQSGYGSQVPPQSGYAGYGMPQA 551
G P + A Y Q A P PP + + Q Y G G QA
Sbjct: 509 QGQSSGPDYSKAWEEYYKKQTQAAGPGSQQSSPPDYSAAWVEYYRQQGAYYGQGQTQA 566
Score = 42 (19.8 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 18/64 (28%), Positives = 20/64 (31%)
Query: 305 GYSQQGYQARPPTS--WGTPGAPSMQQPGYGYVQ--PGAYPGQTPQYNMSQPPYGGYPSQ 360
G QG + P S W Q G G Q P Y +Y Q Y G
Sbjct: 505 GQQNQGQSSGPDYSKAWEEYYKKQTQAAGPGSQQSSPPDYSAAWVEYYRQQGAYYGQGQT 564
Query: 361 PTPG 364
PG
Sbjct: 565 QAPG 568
>WB|WBGene00007534 [details] [associations]
symbol:C12D8.1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016246 "RNA
interference" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0016246
GO:GO:0003723 EMBL:Z73969 KO:K13210 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 HSSP:Q96AE4 HOGENOM:HOG000018892
GeneID:179423 KEGG:cel:CELE_C12D8.1 UCSC:C12D8.1b CTD:179423
NextBio:905322 PIR:T19217 RefSeq:NP_505633.1
ProteinModelPortal:Q17936 SMR:Q17936 IntAct:Q17936
MINT:MINT-1038809 STRING:Q17936 PRIDE:Q17936
EnsemblMetazoa:C12D8.1b WormBase:C12D8.1b InParanoid:Q17936
OMA:PERCAVI ArrayExpress:Q17936 Uniprot:Q17936
Length = 611
Score = 259 (96.2 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 65/195 (33%), Positives = 109/195 (55%)
Query: 108 LKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRD 167
+ + A S P G+ T+ I IP R G+IIGKSG+TI+ LQ +SG K+ + +D
Sbjct: 134 INEVVARSQNPRPQYGFPRAQTTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD 193
Query: 168 TEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAE--SGGSGIVARRLTGQAG-SDHFA 224
++ ++ ++ + + G P++I A+QL+ ++L +GGSG+ G G S
Sbjct: 194 NQS-VSDQSKPLRITGDPQKIELAKQLVAEILNSGGDGNGGSGLQMHHAGGGGGASARGE 252
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTST-ERTVQIDGTSEQIES 283
+ +P + VG++IGK G+TIK + TG +IQ P D ST ER I GT +QI
Sbjct: 253 VVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF----KPDDDPSTPERCAVIMGTRDQIYR 308
Query: 284 AKQLVNEVISENRIR 298
A + + E++ ++ ++
Sbjct: 309 ATERITELVKKSTMQ 323
Score = 258 (95.9 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 64/169 (37%), Positives = 94/169 (55%)
Query: 122 GGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVEL 181
GG + G ++ +P VG+IIGK G+TIK L +++G KIQ D D ++P R +
Sbjct: 245 GGASARG---EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDD--DPSTPERCAVI 299
Query: 182 MGTPEQIAKAEQLINDVLAEA--ESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKG 239
MGT +QI +A + I +++ ++ + GG G VA + S F M +P K GLVIGKG
Sbjct: 300 MGTRDQIYRATERITELVKKSTMQQGGGGNVAGAMVSNEAST-FYMSVPAAKCGLVIGKG 358
Query: 240 GETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLV 288
GETIK + + +GA + L P + E+ I G IE AK L+
Sbjct: 359 GETIKQINSESGAHCE---LSRDPTGNADEKVFVIKGGKRAIEHAKHLI 404
Score = 221 (82.9 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 54/164 (32%), Positives = 97/164 (59%)
Query: 130 SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIA 189
++K IP VG++IG+ G I+ +Q ++G ++Q++ D AD +S R V L G+ +
Sbjct: 71 NEKYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPD--ADPSSGVRMVTLEGSRSNVE 128
Query: 190 KAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A+ LIN+V+A +++ R Q D + IP N+ GL+IGK G+TI+ +Q +
Sbjct: 129 TAKHLINEVVARSQNPRPQYGFPR--AQTTID---IAIPPNRCGLIIGKSGDTIRQLQEK 183
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVIS 293
+G ++ ++ + D S + ++I G ++IE AKQLV E+++
Sbjct: 184 SGCKMILVQDNQSVSDQS--KPLRITGDPQKIELAKQLVAEILN 225
Score = 146 (56.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
IP + VG+VIG+GG I+ +QA+ G R+Q+ P P +S R V ++G+ +E+AK
Sbjct: 76 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADP---SSGVRMVTLEGSRSNVETAKH 132
Query: 287 LVNEVISENRIRNPAMAGGY 306
L+NEV++ R +NP G+
Sbjct: 133 LINEVVA--RSQNPRPQYGF 150
Score = 60 (26.2 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 43/164 (26%), Positives = 55/164 (33%)
Query: 423 QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDS 482
QQ YAQ + AP + G P QQ Y V P+ +
Sbjct: 463 QQNSVYAQQTAAPAAAPYAAAGIVQP-QQQVAYQQPQVVQQVQ--------PATTVAATT 513
Query: 483 TQAPPPV---QSSAAMGQQGY---GTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ 536
T PV Q +A + Y G + A + A + V P G Q
Sbjct: 514 TPTVDPVTGEQDYSAQWMEYYKSIGAHDKAEAVEAQMKKKKAEAAARAVVP---GGLIQQ 570
Query: 537 VPPQSGYAGYGMPQ----AQKPLANPPAYGQTQQSPGSAGGYGQ 576
+P G MPQ A+ P N PAY +P A YGQ
Sbjct: 571 MP-----MGMAMPQMSAQARVPTQNYPAYSAAGAAPYQAQQYGQ 609
Score = 37 (18.1 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 69 QIAARLCNSVSAEAKRPRVENG 90
+ A L N V A ++ PR + G
Sbjct: 128 ETAKHLINEVVARSQNPRPQYG 149
>UNIPROTKB|Q17936 [details] [associations]
symbol:C12D8.1 "Protein C12D8.1, isoform b" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0016246 GO:GO:0003723
EMBL:Z73969 KO:K13210 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 HSSP:Q96AE4 HOGENOM:HOG000018892
GeneID:179423 KEGG:cel:CELE_C12D8.1 UCSC:C12D8.1b CTD:179423
NextBio:905322 PIR:T19217 RefSeq:NP_505633.1
ProteinModelPortal:Q17936 SMR:Q17936 IntAct:Q17936
MINT:MINT-1038809 STRING:Q17936 PRIDE:Q17936
EnsemblMetazoa:C12D8.1b WormBase:C12D8.1b InParanoid:Q17936
OMA:PERCAVI ArrayExpress:Q17936 Uniprot:Q17936
Length = 611
Score = 259 (96.2 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 65/195 (33%), Positives = 109/195 (55%)
Query: 108 LKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRD 167
+ + A S P G+ T+ I IP R G+IIGKSG+TI+ LQ +SG K+ + +D
Sbjct: 134 INEVVARSQNPRPQYGFPRAQTTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD 193
Query: 168 TEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAE--SGGSGIVARRLTGQAG-SDHFA 224
++ ++ ++ + + G P++I A+QL+ ++L +GGSG+ G G S
Sbjct: 194 NQS-VSDQSKPLRITGDPQKIELAKQLVAEILNSGGDGNGGSGLQMHHAGGGGGASARGE 252
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTST-ERTVQIDGTSEQIES 283
+ +P + VG++IGK G+TIK + TG +IQ P D ST ER I GT +QI
Sbjct: 253 VVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF----KPDDDPSTPERCAVIMGTRDQIYR 308
Query: 284 AKQLVNEVISENRIR 298
A + + E++ ++ ++
Sbjct: 309 ATERITELVKKSTMQ 323
Score = 258 (95.9 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 64/169 (37%), Positives = 94/169 (55%)
Query: 122 GGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVEL 181
GG + G ++ +P VG+IIGK G+TIK L +++G KIQ D D ++P R +
Sbjct: 245 GGASARG---EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDD--DPSTPERCAVI 299
Query: 182 MGTPEQIAKAEQLINDVLAEA--ESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKG 239
MGT +QI +A + I +++ ++ + GG G VA + S F M +P K GLVIGKG
Sbjct: 300 MGTRDQIYRATERITELVKKSTMQQGGGGNVAGAMVSNEAST-FYMSVPAAKCGLVIGKG 358
Query: 240 GETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLV 288
GETIK + + +GA + L P + E+ I G IE AK L+
Sbjct: 359 GETIKQINSESGAHCE---LSRDPTGNADEKVFVIKGGKRAIEHAKHLI 404
Score = 221 (82.9 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 54/164 (32%), Positives = 97/164 (59%)
Query: 130 SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIA 189
++K IP VG++IG+ G I+ +Q ++G ++Q++ D AD +S R V L G+ +
Sbjct: 71 NEKYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPD--ADPSSGVRMVTLEGSRSNVE 128
Query: 190 KAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
A+ LIN+V+A +++ R Q D + IP N+ GL+IGK G+TI+ +Q +
Sbjct: 129 TAKHLINEVVARSQNPRPQYGFPR--AQTTID---IAIPPNRCGLIIGKSGDTIRQLQEK 183
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVIS 293
+G ++ ++ + D S + ++I G ++IE AKQLV E+++
Sbjct: 184 SGCKMILVQDNQSVSDQS--KPLRITGDPQKIELAKQLVAEILN 225
Score = 146 (56.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
IP + VG+VIG+GG I+ +QA+ G R+Q+ P P +S R V ++G+ +E+AK
Sbjct: 76 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADP---SSGVRMVTLEGSRSNVETAKH 132
Query: 287 LVNEVISENRIRNPAMAGGY 306
L+NEV++ R +NP G+
Sbjct: 133 LINEVVA--RSQNPRPQYGF 150
Score = 60 (26.2 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 43/164 (26%), Positives = 55/164 (33%)
Query: 423 QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDS 482
QQ YAQ + AP + G P QQ Y V P+ +
Sbjct: 463 QQNSVYAQQTAAPAAAPYAAAGIVQP-QQQVAYQQPQVVQQVQ--------PATTVAATT 513
Query: 483 TQAPPPV---QSSAAMGQQGY---GTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ 536
T PV Q +A + Y G + A + A + V P G Q
Sbjct: 514 TPTVDPVTGEQDYSAQWMEYYKSIGAHDKAEAVEAQMKKKKAEAAARAVVP---GGLIQQ 570
Query: 537 VPPQSGYAGYGMPQ----AQKPLANPPAYGQTQQSPGSAGGYGQ 576
+P G MPQ A+ P N PAY +P A YGQ
Sbjct: 571 MP-----MGMAMPQMSAQARVPTQNYPAYSAAGAAPYQAQQYGQ 609
Score = 37 (18.1 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 69 QIAARLCNSVSAEAKRPRVENG 90
+ A L N V A ++ PR + G
Sbjct: 128 ETAKHLINEVVARSQNPRPQYG 149
>UNIPROTKB|Q96I24 [details] [associations]
symbol:FUBP3 "Far upstream element-binding protein 3"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0010628 "positive regulation of gene expression"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 EMBL:U69127 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0003677 EMBL:CH471090
GO:GO:0006351 GO:GO:0003723 EMBL:AL359092 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210 EMBL:AK295155
EMBL:AL353695 EMBL:BC001325 EMBL:BC007874 EMBL:BC137338
EMBL:BC137340 IPI:IPI00063245 IPI:IPI00377261 RefSeq:NP_003925.1
UniGene:Hs.673029 UniGene:Hs.98751 ProteinModelPortal:Q96I24
SMR:Q96I24 DIP:DIP-50124N IntAct:Q96I24 STRING:Q96I24
PhosphoSite:Q96I24 DMDM:37078499 REPRODUCTION-2DPAGE:IPI00377261
PaxDb:Q96I24 PRIDE:Q96I24 DNASU:8939 Ensembl:ENST00000319725
Ensembl:ENST00000372376 GeneID:8939 KEGG:hsa:8939 UCSC:uc004bzr.1
UCSC:uc010mzd.1 CTD:8939 GeneCards:GC09P133454 HGNC:HGNC:4005
HPA:HPA047658 MIM:603536 neXtProt:NX_Q96I24 PharmGKB:PA28421
InParanoid:Q96I24 OMA:AAPHQNT OrthoDB:EOG4X97H1 PhylomeDB:Q96I24
GenomeRNAi:8939 NextBio:33614 ArrayExpress:Q96I24 Bgee:Q96I24
CleanEx:HS_FUBP3 Genevestigator:Q96I24 GermOnline:ENSG00000107164
Uniprot:Q96I24
Length = 572
Score = 240 (89.5 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 57/171 (33%), Positives = 99/171 (57%)
Query: 124 YQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMG 183
+Q +++ ++P+ VG IIG+ GE I +Q +SG KIQ+ ++ P R L G
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSG---IPERPCVLTG 129
Query: 184 TPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETI 243
TPE I +A++L+ ++ +G G + S + IP +KVGLVIG+GGETI
Sbjct: 130 TPESIEQAKRLLGQIVDRCRNG-PGF---HNDIDSNSTIQEILIPASKVGLVIGRGGETI 185
Query: 244 KNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
K +Q RTG ++++ + P T ++ ++I G + +++ A+++V E+I E
Sbjct: 186 KQLQERTG--VKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIRE 234
Score = 214 (80.4 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 59/216 (27%), Positives = 105/216 (48%)
Query: 118 PVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTR 177
P + S T ++I IP +VG++IG+ GETIK LQ ++G K+ + +D + +
Sbjct: 152 PGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGAD-K 210
Query: 178 SVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIG 237
+ + G ++ +A +++ +++ E + V + G + +P VG+VIG
Sbjct: 211 PLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVSVPRFAVGIVIG 270
Query: 238 KGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRI 297
+ GE IK +Q G RIQ P S ER Q+ G ++ + A +++E+I +
Sbjct: 271 RNGEMIKKIQNDAGVRIQF----KPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQE 326
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPS-MQQPGY 332
R+ GG + + R W GAP +Q+ Y
Sbjct: 327 RDGF--GGLAAARGRGRGRGDWSV-GAPGGVQEITY 359
Score = 129 (50.5 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 64/276 (23%), Positives = 105/276 (38%)
Query: 69 QIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMG 128
Q AA + + + A+ +G GG +A +G D S+ AP GG Q +
Sbjct: 311 QHAAHIISELILTAQE---RDGFGGLAAA-RGRGRGRGDW-SVGAP-------GGVQEIT 358
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
+ +P + G++IGK GE IK + QSGA +++ R+ + + R + G P+QI
Sbjct: 359 YT----VPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQI 414
Query: 189 AKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQA 248
A QLI++ + G G + Q + P G NM A
Sbjct: 415 EVARQLIDEKVGGTNLGAPGAFGQSPFSQPPAPPHQNTFPPRSSGC--------FPNMAA 466
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQ 308
+ P+ PP + + + ++ S + A Y +
Sbjct: 467 KVNGNPHSTPVSGPPAFLTQGWGSTYQAWQQPTQQVPSQQSQPQSSQPNYSKAWEDYYKK 526
Query: 309 QGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQT 344
Q + A +P +M Y Y Q A+ GQT
Sbjct: 527 QSHAASAAPQASSPPDYTMAWAEY-YRQQVAFYGQT 561
Score = 73 (30.8 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 38/157 (24%), Positives = 58/157 (36%)
Query: 431 DSYGGYHAPQSG-YGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPV 489
+ GG + G +GQ+ P+ Q A + N G P+ A+ + PV
Sbjct: 423 EKVGGTNLGAPGAFGQS-PFSQPP----APPHQNTFPPRSSGCFPNMAAKVNGNPHSTPV 477
Query: 490 QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMP 549
A QG+G+ Q P +QP P S++ + QS +A P
Sbjct: 478 SGPPAFLTQGWGSTYQAWQQPTQQVPSQQSQPQSSQPNYSKA-WEDYYKKQS-HAASAAP 535
Query: 550 QAQKPLANPPAYGQTQQSPGSAGGYGQP---GYSHSQ 583
QA P A+ + + YGQ +HSQ
Sbjct: 536 QASSPPDYTMAWAEYYRQ--QVAFYGQTLGQAQAHSQ 570
Score = 44 (20.5 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 569 GSAGGYGQPGYSHSQPPPSSYAQPDSGS 596
G+ G +GQ +S PP P S
Sbjct: 431 GAPGAFGQSPFSQPPAPPHQNTFPPRSS 458
>WB|WBGene00022738 [details] [associations]
symbol:ZK418.9 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 eggNOG:NOG300923 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 HSSP:Q96AE4 EMBL:FO080150
HOGENOM:HOG000018892 PIR:T27855 RefSeq:NP_001023000.1
ProteinModelPortal:Q23487 SMR:Q23487 STRING:Q23487 PaxDb:Q23487
PRIDE:Q23487 EnsemblMetazoa:ZK418.9a GeneID:175989
KEGG:cel:CELE_ZK418.9 UCSC:ZK418.9b.2 CTD:175989 WormBase:ZK418.9a
InParanoid:Q23487 OMA:NCTIEGP NextBio:890626 ArrayExpress:Q23487
Uniprot:Q23487
Length = 557
Score = 266 (98.7 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 86/251 (34%), Positives = 110/251 (43%)
Query: 122 GGYQSMGTSKKIEI--PNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
GGY + K E+ P + G+IIGK GE IK L ++G KIQ DT NS R
Sbjct: 231 GGYGAQEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNP--NSEDRIA 288
Query: 180 ELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQA--GSDHFAMKIPNNKVGLVIG 237
+MGT +QI +A + I +++ A R G G F M +P K GLVIG
Sbjct: 289 VIMGTRDQIYRATERITEIVNRAIKNNGAPQDRGSAGTVLPGQSIFYMHVPAGKCGLVIG 348
Query: 238 KGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRI 297
KGGE IK ++ TGA + P + E+ +I G+ QI A LV + E
Sbjct: 349 KGGENIKQIERETGATCGLAPAAEQKNED--EKVFEIKGSQLQIHHASHLVRIKVGEISP 406
Query: 298 RNPA-----MAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQP 352
P GGY QQ QA S GT Q G G++Q P Q P
Sbjct: 407 NTPVPPLQGAGGGYQQQ--QAM--FSAGTQNG-GYQSTG-GFIQQQQQPQFQHQQQQWAP 460
Query: 353 PYGGYPSQPTP 363
GG Q P
Sbjct: 461 QNGGGVQQRLP 471
Score = 221 (82.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 72/244 (29%), Positives = 119/244 (48%)
Query: 86 RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIE----IPNIRVG 141
++ GG + + S D IP + V G +MG S KI +P VG
Sbjct: 10 QIIGADGGIGTLKRPLDSEILDGDLIPTKKSSEV---GDLNMGDSDKITDIYPVPEKVVG 66
Query: 142 VIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAE 201
++IGK G I+ +Q SG ++Q+ D ++ +N R+ + G P+Q+A A Q+I V+
Sbjct: 67 LVIGKGGSEIRLIQQTSGCRVQMDPDHQS-VNG-FRNCTIEGPPDQVAVARQMITQVINR 124
Query: 202 AESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHL 261
++G A G+ + M IP +K+GLVIGKGGETI+ +Q ++G R +
Sbjct: 125 NQTGAQPGAA---PGEVTEE---MLIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQET 178
Query: 262 PPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAM-----------AGGYSQQG 310
T + +++ G+ IE+AK LV+ +++ + P + GGY Q
Sbjct: 179 TTA-TGQPKPLRMIGSPAAIETAKALVHNIMNNTQGNAPLLQRAPHQPSGQFGGGYGAQE 237
Query: 311 YQAR 314
QA+
Sbjct: 238 AQAK 241
Score = 213 (80.0 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 56/182 (30%), Positives = 101/182 (55%)
Query: 130 SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAK-IQVTRDTEADLNSPTRSVELMGTPEQI 188
++++ IP ++G++IGK GETI+ +Q QSG + V ++T P + + ++G+P I
Sbjct: 139 TEEMLIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQP-KPLRMIGSPAAI 197
Query: 189 AKAEQLINDVLAEAESGGSGIVAR---RLTGQAGSDHFAMK--------IPNNKVGLVIG 237
A+ L+++++ + G + ++ R + +GQ G + A + +P G++IG
Sbjct: 198 ETAKALVHNIMNNTQ-GNAPLLQRAPHQPSGQFGGGYGAQEAQAKGEVIVPRLSAGMIIG 256
Query: 238 KGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRI 297
KGGE IK + A TG +IQ P P S +R I GT +QI A + + E+++ I
Sbjct: 257 KGGEMIKRLAAETGTKIQFKPDTNP---NSEDRIAVIMGTRDQIYRATERITEIVNR-AI 312
Query: 298 RN 299
+N
Sbjct: 313 KN 314
Score = 59 (25.8 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 30/103 (29%), Positives = 39/103 (37%)
Query: 507 SPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYG--MPQAQKPLANPPAYGQT 564
SPNT P QGA G Q S GY G + Q Q+P + Q
Sbjct: 405 SPNTPVPPLQGA-----GGGYQQQQAMFSAGTQNGGYQSTGGFIQQQQQPQFQ---HQQQ 456
Query: 565 QQSPGSAGGYGQ--PGYSHSQP--PPSSYAQPDSGSQRAPPSN 603
Q +P + GG Q P + P P + P + + AP N
Sbjct: 457 QWAPQNGGGVQQRLPTEMYQNPMQQPQASVIPQASADPAPAVN 499
Score = 58 (25.5 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 22/70 (31%), Positives = 27/70 (38%)
Query: 537 VPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGS 596
VPP G AG G Q Q + G Q + G QP + H Q +A + G
Sbjct: 410 VPPLQG-AGGGYQQQQAMFSAGTQNGGYQSTGGFIQQQQQPQFQHQQ---QQWAPQNGGG 465
Query: 597 --QRAPPSNY 604
QR P Y
Sbjct: 466 VQQRLPTEMY 475
Score = 44 (20.5 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 31/143 (21%), Positives = 45/143 (31%)
Query: 415 QPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTP 474
Q GY QQ ++ + G + G+ Q Q Q N Q T
Sbjct: 414 QGAGGGYQQQQAMFSAGTQNGGYQSTGGFIQQQQQPQFQHQQQQWAPQNGGGVQQRLPTE 473
Query: 475 SYGAQGDSTQAPPPVQSSAAMG---QQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS 531
Y QA Q+SA G + A Y G + + V +
Sbjct: 474 MYQNPMQQPQASVIPQASADPAPAVNPATGAPDYSAQWAAYYRSIGLVEQAAMVESQMRR 533
Query: 532 GYGSQVPPQSGYAGYGMPQAQKP 554
+ P G G+PQ+Q+P
Sbjct: 534 NQSNTAP--LGDVS-GVPQSQQP 553
>UNIPROTKB|F1NYJ3 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00650000093048 EMBL:AADN02026565
EMBL:AADN02026566 EMBL:AADN02026567 EMBL:AADN02026568
EMBL:AADN02026569 EMBL:AADN02026570 IPI:IPI00819889
Ensembl:ENSGALT00000006277 ArrayExpress:F1NYJ3 Uniprot:F1NYJ3
Length = 508
Score = 263 (97.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 74/229 (32%), Positives = 115/229 (50%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
G S ++ +P VG++IG++GE IK +Q +G +IQ D D SP R ++MG P++
Sbjct: 242 GGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGISPERVAQVMGLPDR 298
Query: 188 IAKAEQLINDVL--AEAESG-GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLV 235
A +I++++ A+ G GS VAR R G+ G +P +K GLV
Sbjct: 299 CQHAAHIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYTVPADKCGLV 358
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGGE IK++ ++GA ++ + + PP R I G +QIE A+ L++E +
Sbjct: 359 IGKGGENIKSINQQSGAHVE-LQRNPPPNTDPGVRIFTIRGVPQQIELARHLIDEKVGGT 417
Query: 296 RIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQ 343
+ P GG+ Q + P T G + G+G Q PGQ
Sbjct: 418 SMGGP---GGFGQSPFNQAPTTPHQN-GPQAFMTQGWGSTYQTWQQPGQ 462
Score = 251 (93.4 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 60/171 (35%), Positives = 99/171 (57%)
Query: 124 YQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMG 183
+Q ++ ++P+ VG IIG+ GE I +Q++SG KIQ+ D+ P R L G
Sbjct: 62 HQRAVITEDFKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGG---MPERPCVLTG 118
Query: 184 TPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETI 243
TPE I +A++L+ ++ +G G + G + IP +KVGLVIGKGGETI
Sbjct: 119 TPESIEQAKRLLGQIVDRCRNG-PGF-HNDVDGNSTIQEIL--IPASKVGLVIGKGGETI 174
Query: 244 KNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
K +Q RTG +++I + P T ++ ++I G + +++ A+++V E+I E
Sbjct: 175 KQLQERTG--VKMIMIQDGPMPTGADKPLRITGDAFKVQQAREMVLEIIRE 223
Score = 218 (81.8 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 58/204 (28%), Positives = 104/204 (50%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
T ++I IP +VG++IGK GETIK LQ ++G K+ + +D + + + + G ++
Sbjct: 152 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGAD-KPLRITGDAFKV 210
Query: 189 AKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQA 248
+A +++ +++ E + V + + G + +P VG+VIG+ GE IK +Q
Sbjct: 211 QQAREMVLEIIREKDQADFRGVRNDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQN 270
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQ 308
G RIQ P S ER Q+ G ++ + A +++E+I + R+ + ++
Sbjct: 271 DAGVRIQF----KPDDGISPERVAQVMGLPDRCQHAAHIISELILTAQERDGFGSLAVAR 326
Query: 309 QGYQARPPTSWGTPGAPSMQQPGY 332
+ R S GTPG MQ+ Y
Sbjct: 327 GRGRGRGDWSVGTPGG--MQEITY 348
Score = 39 (18.8 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 567 SPGSAGGYGQPGYSHSQPPP 586
S G GG+GQ ++ + P
Sbjct: 418 SMGGPGGFGQSPFNQAPTTP 437
Score = 38 (18.4 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 9/45 (20%), Positives = 16/45 (35%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNS 457
++Q P + + Q + +G + GQ P G S
Sbjct: 430 FNQAPTTPHQNGPQAFMTQGWGSTYQTWQQPGQQVPSKYHNGTQS 474
>UNIPROTKB|F1NGC0 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0006351 GO:GO:0003723
GeneTree:ENSGT00650000093048 OMA:AAPHQNT EMBL:AADN02026565
EMBL:AADN02026566 EMBL:AADN02026567 EMBL:AADN02026568
EMBL:AADN02026569 EMBL:AADN02026570 IPI:IPI00578263
Ensembl:ENSGALT00000039554 ArrayExpress:F1NGC0 Uniprot:F1NGC0
Length = 539
Score = 263 (97.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 74/229 (32%), Positives = 115/229 (50%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
G S ++ +P VG++IG++GE IK +Q +G +IQ D D SP R ++MG P++
Sbjct: 271 GGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGISPERVAQVMGLPDR 327
Query: 188 IAKAEQLINDVL--AEAESG-GSGIVAR-RLTGQA--------GSDHFAMKIPNNKVGLV 235
A +I++++ A+ G GS VAR R G+ G +P +K GLV
Sbjct: 328 CQHAAHIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYTVPADKCGLV 387
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGGE IK++ ++GA ++ + + PP R I G +QIE A+ L++E +
Sbjct: 388 IGKGGENIKSINQQSGAHVE-LQRNPPPNTDPGVRIFTIRGVPQQIELARHLIDEKVGGT 446
Query: 296 RIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQ 343
+ P GG+ Q + P T G + G+G Q PGQ
Sbjct: 447 SMGGP---GGFGQSPFNQAPTTPHQN-GPQAFMTQGWGSTYQTWQQPGQ 491
Score = 251 (93.4 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 60/171 (35%), Positives = 99/171 (57%)
Query: 124 YQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMG 183
+Q ++ ++P+ VG IIG+ GE I +Q++SG KIQ+ D+ P R L G
Sbjct: 91 HQRAVITEDFKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGG---MPERPCVLTG 147
Query: 184 TPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETI 243
TPE I +A++L+ ++ +G G + G + IP +KVGLVIGKGGETI
Sbjct: 148 TPESIEQAKRLLGQIVDRCRNG-PGF-HNDVDGNSTIQEIL--IPASKVGLVIGKGGETI 203
Query: 244 KNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
K +Q RTG +++I + P T ++ ++I G + +++ A+++V E+I E
Sbjct: 204 KQLQERTG--VKMIMIQDGPMPTGADKPLRITGDAFKVQQAREMVLEIIRE 252
Score = 218 (81.8 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 58/204 (28%), Positives = 104/204 (50%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
T ++I IP +VG++IGK GETIK LQ ++G K+ + +D + + + + G ++
Sbjct: 181 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGAD-KPLRITGDAFKV 239
Query: 189 AKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQA 248
+A +++ +++ E + V + + G + +P VG+VIG+ GE IK +Q
Sbjct: 240 QQAREMVLEIIREKDQADFRGVRNDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQN 299
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQ 308
G RIQ P S ER Q+ G ++ + A +++E+I + R+ + ++
Sbjct: 300 DAGVRIQF----KPDDGISPERVAQVMGLPDRCQHAAHIISELILTAQERDGFGSLAVAR 355
Query: 309 QGYQARPPTSWGTPGAPSMQQPGY 332
+ R S GTPG MQ+ Y
Sbjct: 356 GRGRGRGDWSVGTPGG--MQEITY 377
Score = 52 (23.4 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 20/55 (36%), Positives = 25/55 (45%)
Query: 494 AMGQQGYGTGQQPSPNTASYPPQGATQP--SYGVPPTSQSGY--GSQVPPQSGYA 544
+MG G G GQ P + P Q Q + G T Q+ G QVP +SG A
Sbjct: 447 SMGGPG-GFGQSPFNQAPTTPHQNGPQAFMTQGWGSTYQTWQQPGQQVPNKSGSA 500
Score = 39 (18.8 bits), Expect = 8.1e-18, Sum P(2) = 8.1e-18
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 567 SPGSAGGYGQPGYSHSQPPP 586
S G GG+GQ ++ + P
Sbjct: 447 SMGGPGGFGQSPFNQAPTTP 466
Score = 37 (18.1 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 9/48 (18%), Positives = 18/48 (37%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAG 460
++Q P + + Q + +G + GQ P S++G
Sbjct: 459 FNQAPTTPHQNGPQAFMTQGWGSTYQTWQQPGQQVPNKSGSAQISSSG 506
>UNIPROTKB|Q7JPS0 [details] [associations]
symbol:Psi "PSI" species:7242 "Drosophila sp." [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IDA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0048024 "regulation
of mRNA splicing, via spliceosome" evidence=IMP] [GO:0048025
"negative regulation of mRNA splicing, via spliceosome"
evidence=IDA;IMP] [GO:0005685 "U1 snRNP" evidence=IPI]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0003729 GO:GO:0006397
GO:GO:0007283 GO:GO:0048025 GO:GO:0000381 InterPro:IPR015096
Pfam:PF09005 PDB:2BN5 PDBsum:2BN5 FlyBase:FBgn0014870 EMBL:S75665
PDB:2BN6 PDBsum:2BN6 ProteinModelPortal:Q7JPS0 SMR:Q7JPS0
InParanoid:Q7JPS0 EvolutionaryTrace:Q7JPS0 Uniprot:Q7JPS0
Length = 796
Score = 223 (83.6 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 73/243 (30%), Positives = 116/243 (47%)
Query: 108 LKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRD 167
L +I P P Y YQ +I IP +VG++IGK G+TIK LQ ++GAK+ + +D
Sbjct: 197 LLTINMPPPGPSGYPPYQ------EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQD 250
Query: 168 -TEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAES--------------GGSGIVAR 212
+L P R + G ++I A+Q++ D++A+ ++ GG G+
Sbjct: 251 GPNQELIKPLR---ISGEAQKIEHAKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFN 307
Query: 213 RLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTV 272
G + + +P VG+VIGKGG+ I+ +Q G ++Q I D +R
Sbjct: 308 NFNNGNGGESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRC 364
Query: 273 QIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQP-G 331
I GT +Q++ AK+ ++ +I RN G ++ G G PG S G
Sbjct: 365 VIQGTRQQVDDAKRTIDGLIENVMQRN-----GMNRNGNGGG-----GGPGGDSGNSNYG 414
Query: 332 YGY 334
YGY
Sbjct: 415 YGY 417
Score = 218 (81.8 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 70/228 (30%), Positives = 117/228 (51%)
Query: 87 VENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTS--KKIEIPNIRVGVII 144
+ +GSGG G S ++I +A+ S GTS ++I +P G +
Sbjct: 81 MSSGSGGGGGGGGG-PGGASITQAIAQAAAVAARLAA--SAGTSCEEQIRLPESVAGAFM 137
Query: 145 GKSG-ETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAE 203
G+S +TI ++Q +SG K+QV +D + R + L G + + K ++I ++ A
Sbjct: 138 GRSSNDTITHIQAESGVKVQVMQDQD-------RVIMLRGQRDTVTKGREMIQNM---AN 187
Query: 204 SGGSGIVARRLT------GQAGSDHFA-MKIPNNKVGLVIGKGGETIKNMQARTGARIQV 256
G G V LT G +G + + IP KVGLVIGKGG+TIK +Q +TGA++ +
Sbjct: 188 RAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMII 247
Query: 257 IPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAG 304
I P + + ++I G +++IE AKQ+V ++I++ + G
Sbjct: 248 IQ-DGP--NQELIKPLRISGEAQKIEHAKQMVLDLIAQKDAQGQQQGG 292
Score = 139 (54.0 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 72/268 (26%), Positives = 110/268 (41%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
G S ++ +P I VGV+IGK G+ I+ +Q + G K+Q + ++ R + GT +Q
Sbjct: 315 GESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGD--RRCVIQGTRQQ 372
Query: 188 IAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIG----KGG-ET 242
+ A++ I D L E +G+ G G N+ G G +GG E
Sbjct: 373 VDDAKRTI-DGLIENVMQRNGM---NRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREE 428
Query: 243 IKNMQ---------ARTGARIQVIP----LHLP----PGDTSTERTVQIDGTSEQIESAK 285
I + R G I++I H + E+ + GT++Q+E+A+
Sbjct: 429 ITFLVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKSKGTTDQVEAAR 488
Query: 286 QLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP 345
Q+++E I N N S++ P G G Q + Q G Y GQ
Sbjct: 489 QMISEKI--NMELNVI-----SRKPIGGGPGGGGGNSGGG--QNNSHHNQQQGGYGGQN- 538
Query: 346 QYNMSQPPYG-GYPSQPTPGGY-PGNWD 371
Q P G GY QP G Y WD
Sbjct: 539 QMQGGDPNSGAGYQQQPWGGPYGQQGWD 566
Score = 88 (36.0 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 52/184 (28%), Positives = 64/184 (34%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYG-QAAPYDQQQGYNSAAGYGNVNNTSQEGH 472
S P Q Q +Q GG A + Y Q A Y Y S G +
Sbjct: 625 SSGPVQQQQPQQQQQSQQQTGGAGAGGADYSAQWAEY-----YRSV---GKIEEAEAIEK 676
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS--YG--VPPT 528
T G Q+ P S GQQ QP+P A+ A + YG + PT
Sbjct: 677 TLKNKQNGSGGQSSTPNPSQGGSGQQ------QPNPAAAAAAAAAAAAAAGGYGQSMTPT 730
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGS-AGGYGQPGYSHSQPPPS 587
+ Y SQ + AG G PQ A P GQ+ PG+ G Y GY P
Sbjct: 731 QYAQY-SQYYAAAAAAG-GQPQG----APQPGGGQSGGPPGNYPGNYPGAGYGGYPGAPG 784
Query: 588 SYAQ 591
Q
Sbjct: 785 QQQQ 788
Score = 83 (34.3 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 27/63 (42%), Positives = 28/63 (44%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
P YSQ Y A + G P GAP QPG G Q G PG P N YGGYP
Sbjct: 729 PTQYAQYSQ--YYAAAAAAGGQPQGAP---QPGGG--QSGGPPGNYPG-NYPGAGYGGYP 780
Query: 359 SQP 361
P
Sbjct: 781 GAP 783
Score = 78 (32.5 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 58/210 (27%), Positives = 72/210 (34%)
Query: 419 SGYNQQGQGYAQ--DSYGGYHAPQSGYGQAAPYDQQQG-YNSAAGYGNVNNTSQEGHTPS 475
SG QQ Q + GG Q Q Y +Q G + A Q G
Sbjct: 568 SGQQQQMAMANQGGSAAGGASGGQDYSAQWIEYYKQMGCHREAEMIEQQMKAKQAG---- 623
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQP-SPNTASYPPQ-GATQPSYGVPPT---SQ 530
G+ G Q P Q + G G G S A Y G + + + T Q
Sbjct: 624 -GSSGPVQQQQPQQQQQSQQQTGGAGAGGADYSAQWAEYYRSVGKIEEAEAIEKTLKNKQ 682
Query: 531 SGYGSQVP-PQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA-GGYGQ---PG-YS-HSQ 583
+G G Q P G G Q+P NP A + +A GGYGQ P Y+ +SQ
Sbjct: 683 NGSGGQSSTPNPSQGGSGQ---QQP--NPAAAAAAAAAAAAAAGGYGQSMTPTQYAQYSQ 737
Query: 584 ---------PPPSSYAQPDSGSQRAPPSNY 604
P QP G PP NY
Sbjct: 738 YYAAAAAAGGQPQGAPQPGGGQSGGPPGNY 767
Score = 77 (32.2 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 33/105 (31%), Positives = 42/105 (40%)
Query: 278 SEQIESA-KQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGY-V 335
+E IE K N ++ NP+ GG QQ Q P + A + GYG +
Sbjct: 671 AEAIEKTLKNKQNGSGGQSSTPNPSQ-GGSGQQ--QPNPAAAAAAAAAAAAAAGGYGQSM 727
Query: 336 QPGAYPGQTPQYNMSQPPYGGYPS-QPTPGG---------YPGNW 370
P Y Q QY + GG P P PGG YPGN+
Sbjct: 728 TPTQY-AQYSQYYAAAAAAGGQPQGAPQPGGGQSGGPPGNYPGNY 771
Score = 71 (30.1 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 46/204 (22%), Positives = 69/204 (33%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ----QGYNSAAGYGNVN 465
GY G G GY Q +GG + Q G+ + Q QG ++A G
Sbjct: 533 GYGGQNQMQGGDPNSGAGYQQQPWGGPYG-QQGWDPSGQQQQMAMANQGGSAAGGASGGQ 591
Query: 466 NTSQEG--HTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY 523
+ S + + G ++ +++ A G G QQP S G
Sbjct: 592 DYSAQWIEYYKQMGCHREAEMIEQQMKAKQAGGSSGPVQQQQPQQQQQSQQQTGGA---- 647
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPP--AYGQTQQSPGSAGGYGQPGYSH 581
G S ++ G +K L N + GQ+ S GG GQ
Sbjct: 648 GAGGADYSAQWAEYYRSVGKIEEA-EAIEKTLKNKQNGSGGQSSTPNPSQGGSGQ----- 701
Query: 582 SQPPPSSYAQPDSGSQRAPPSNYG 605
QP P++ A + + A YG
Sbjct: 702 QQPNPAAAAAA-AAAAAAAAGGYG 724
Score = 68 (29.0 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 39/155 (25%), Positives = 51/155 (32%)
Query: 454 GYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGT--GQQPSPNTA 511
G NS G N ++ Q+G YG Q P S A QQ +G GQQ
Sbjct: 515 GGNSGGGQNNSHHNQQQG---GYGGQNQMQGGDP--NSGAGYQQQPWGGPYGQQ------ 563
Query: 512 SYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA 571
+ P G Q + S G Q A + Q + Q A
Sbjct: 564 GWDPSGQQQ-QMAMANQGGSAAGGASGGQDYSAQWIEYYKQMGCHREAEMIEQQMKAKQA 622
Query: 572 GGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYGA 606
GG P QP +Q +G A ++Y A
Sbjct: 623 GGSSGP-VQQQQPQQQQQSQQQTGGAGAGGADYSA 656
Score = 64 (27.6 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 21/47 (44%), Positives = 21/47 (44%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQTPQ 346
A AGG Q Q S G PG PG GY PGA PGQ Q
Sbjct: 743 AAAGGQPQGAPQPGGGQSGGPPGNYPGNYPGAGYGGYPGA-PGQQQQ 788
Score = 61 (26.5 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 52/202 (25%), Positives = 77/202 (38%)
Query: 419 SGYNQQGQGYAQDSY--GGYHAPQSGYGQ---AAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
S +NQQ GY + GG +GY Q PY QQ G++ + G + +G +
Sbjct: 525 SHHNQQQGGYGGQNQMQGGDPNSGAGYQQQPWGGPYGQQ-GWDPS-GQQQQMAMANQGGS 582
Query: 474 PSYGAQGDSTQAPPPVQSSAAMG--QQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS 531
+ GA G + ++ MG ++ QQ A G++ P P Q
Sbjct: 583 AAGGASGGQDYSAQWIEYYKQMGCHREAEMIEQQMKAKQAG----GSSGPVQQQQPQQQQ 638
Query: 532 GYGSQVPPQSGYAGYGMPQAQKPLANP-PAYGQTQQSPGSAGGY-----GQPGYSHSQPP 585
Q Q+G AG G A + G+ +++ G G S S P
Sbjct: 639 ----QSQQQTGGAGAGGADYSAQWAEYYRSVGKIEEAEAIEKTLKNKQNGSGGQS-STPN 693
Query: 586 PSSYAQPDSGSQRAPPSNYGAA 607
PS Q SG Q+ P+ AA
Sbjct: 694 PS---QGGSGQQQPNPAAAAAA 712
Score = 59 (25.8 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 26/94 (27%), Positives = 30/94 (31%)
Query: 488 PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYG 547
P+ G G GQ S + G G P S +GY Q P G YG
Sbjct: 506 PIGGGPGGGGGNSGGGQNNSHHNQQQGGYGGQNQMQGGDPNSGAGYQQQ--PWGG--PYG 561
Query: 548 MPQAQKPLANPPAYGQTQQSPGSAGGY-GQPGYS 580
Q P Q +AGG G YS
Sbjct: 562 Q-QGWDPSGQQQQMAMANQGGSAAGGASGGQDYS 594
Score = 57 (25.1 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 25/70 (35%), Positives = 28/70 (40%)
Query: 301 AMAGGYSQQ--GYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
A AGGY Q Q + + A + QP G QPG P N P G YP
Sbjct: 718 AAAGGYGQSMTPTQYAQYSQYYAAAAAAGGQP-QGAPQPGGGQSGGPPGNY---P-GNYP 772
Query: 359 SQPTPGGYPG 368
GGYPG
Sbjct: 773 GAGY-GGYPG 781
Score = 55 (24.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 36/135 (26%), Positives = 45/135 (33%)
Query: 420 GYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQ 479
G N Q YGG + Q G + QQQ + YG Q+G PS
Sbjct: 521 GQNNSHHNQQQGGYGGQNQMQGGDPNSGAGYQQQPWGGP--YG------QQGWDPS---- 568
Query: 480 GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQ-GATQPSYGVPPTSQSGYGSQVP 538
G Q Q +A G G GQ S Y Q G + + + Q Q
Sbjct: 569 GQQQQMAMANQGGSAAG--GASGGQDYSAQWIEYYKQMGCHREAEMI---EQQMKAKQAG 623
Query: 539 PQSGYAGYGMPQAQK 553
SG PQ Q+
Sbjct: 624 GSSGPVQQQQPQQQQ 638
Score = 50 (22.7 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 23/76 (30%), Positives = 27/76 (35%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYH---APQSGYGQAA-PYDQQQGYNSAAGYGNV- 464
GY S P Y Q Q YA + G APQ G GQ+ P G AGYG
Sbjct: 722 GYGQSMTPTQ-YAQYSQYYAAAAAAGGQPQGAPQPGGGQSGGPPGNYPGNYPGAGYGGYP 780
Query: 465 --------NNTSQEGH 472
+ + H
Sbjct: 781 GAPGQQQQKSHKNDNH 796
Score = 50 (22.7 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 555 LANPPAYGQTQQSPGSAGGYGQPG 578
+A A GQ Q G GG G PG
Sbjct: 280 IAQKDAQGQQQGGRGGGGGGGGPG 303
>UNIPROTKB|J9P1I9 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00650000093048
EMBL:AAEX03006837 EMBL:AAEX03006838 Ensembl:ENSCAFT00000048747
Uniprot:J9P1I9
Length = 487
Score = 255 (94.8 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 74/245 (30%), Positives = 126/245 (51%)
Query: 52 PPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSI 111
P + + F A R QIAA++ +SV P + N + D + G+ ++
Sbjct: 11 PVGMKAEGFVDALHRVRQIAAKI-DSV------PHLNNSTPLVDPSVYGYG-----VQKR 58
Query: 112 PAPSAIPVSYGG--YQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTE 169
P + G +Q +++ ++P+ VG IIG+ GE I +Q +SG KIQ+ ++
Sbjct: 59 PLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESS 118
Query: 170 ADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPN 229
P R L GTPE I +A++L+ ++ +G G + G + IP
Sbjct: 119 G---IPERPCVLTGTPESIEQAKRLLGQIVDRCRNG-PGF-HNDIDGNSTIQEIL--IPA 171
Query: 230 NKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVN 289
+KVGLVIGKGGETIK +Q RTG ++++ + P T ++ ++I G +++ A+++V
Sbjct: 172 SKVGLVIGKGGETIKQLQERTG--VKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVL 229
Query: 290 EVISE 294
E+I E
Sbjct: 230 EIIRE 234
Score = 248 (92.4 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 62/203 (30%), Positives = 106/203 (52%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
G S ++ +P VG++IG++GE IK +Q +G +IQ D D SP R+ ++MG P++
Sbjct: 253 GGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGISPERAAQVMGPPDR 309
Query: 188 IAKAEQLINDVL--AEAESGGSGIVARRLTGQAGSD----------HFAMKIPNNKVGLV 235
A +IN+++ A+ G G+ R G+ D +P +K GLV
Sbjct: 310 CQHAAHVINELILTAQERDGFGGLTVARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLV 369
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGG+ IK++ ++GA ++ + + PP R I G +QIE A+ L++E +
Sbjct: 370 IGKGGDNIKSINQQSGAHVE-LQRNPPPNTDPNLRIFTIRGIPQQIEVARHLIDEKVGGT 428
Query: 296 RIRNPAMAGGYSQQGYQARPPTS 318
+ P G + Q + ++PP +
Sbjct: 429 SLGAP---GAFGQSPF-SQPPAA 447
Score = 226 (84.6 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 60/205 (29%), Positives = 104/205 (50%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
T ++I IP +VG++IGK GETIK LQ ++G K+ + +D + + + + G P ++
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGAD-KPLRITGDPFKV 221
Query: 189 AKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQA 248
+A +++ +++ E + V + + G + +P VG+VIG+ GE IK +Q
Sbjct: 222 QQAREMVLEIIREKDQADFRGVRGDFSARVGGGSIEVSVPRFAVGIVIGRNGEMIKKIQN 281
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQ 308
G RIQ P S ER Q+ G ++ + A ++NE+I + R+ GG +
Sbjct: 282 DAGVRIQF----KPDDGISPERAAQVMGPPDRCQHAAHVINELILTAQERDGF--GGLTV 335
Query: 309 QGYQARPPTSWGTPGAPS-MQQPGY 332
+ R W GAP +Q+ Y
Sbjct: 336 ARGRGRGRGDWSV-GAPGGVQEITY 359
Score = 127 (49.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +QA +G +IQ+ ER + GT E IE AK
Sbjct: 83 KVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS----ESSGIPERPCVLTGTPESIEQAK 138
Query: 286 QLVNEVISENRIRN 299
+L+ +++ +R RN
Sbjct: 139 RLLGQIV--DRCRN 150
Score = 41 (19.5 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 323 GAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGG-YPS 359
G S+ PG P + P P N P G +PS
Sbjct: 426 GGTSLGAPGAFGQSPFSQPPAAPHQNTFPPRSSGCFPS 463
Score = 40 (19.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 567 SPGSAGGYGQPGYSHSQPPPSSY 589
S G+ G +GQ +S QPP + +
Sbjct: 429 SLGAPGAFGQSPFS--QPPAAPH 449
>UNIPROTKB|F1PEW1 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00650000093048
OMA:AAPHQNT EMBL:AAEX03006837 EMBL:AAEX03006838
Ensembl:ENSCAFT00000031728 Uniprot:F1PEW1
Length = 547
Score = 255 (94.8 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 74/245 (30%), Positives = 126/245 (51%)
Query: 52 PPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSI 111
P + + F A R QIAA++ +SV P + N + D + G+ ++
Sbjct: 11 PVGMKAEGFVDALHRVRQIAAKI-DSV------PHLNNSTPLVDPSVYGYG-----VQKR 58
Query: 112 PAPSAIPVSYGG--YQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTE 169
P + G +Q +++ ++P+ VG IIG+ GE I +Q +SG KIQ+ ++
Sbjct: 59 PLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESS 118
Query: 170 ADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPN 229
P R L GTPE I +A++L+ ++ +G G + G + IP
Sbjct: 119 G---IPERPCVLTGTPESIEQAKRLLGQIVDRCRNG-PGF-HNDIDGNSTIQEIL--IPA 171
Query: 230 NKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVN 289
+KVGLVIGKGGETIK +Q RTG ++++ + P T ++ ++I G +++ A+++V
Sbjct: 172 SKVGLVIGKGGETIKQLQERTG--VKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVL 229
Query: 290 EVISE 294
E+I E
Sbjct: 230 EIIRE 234
Score = 253 (94.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 77/261 (29%), Positives = 124/261 (47%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
G S ++ +P VG++IG++GE IK +Q +G +IQ D D SP R+ ++MG P++
Sbjct: 253 GGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGISPERAAQVMGPPDR 309
Query: 188 IAKAEQLINDVL--AEAESGGSGIVARRLTGQAGSD----------HFAMKIPNNKVGLV 235
A +IN+++ A+ G G+ R G+ D +P +K GLV
Sbjct: 310 CQHAAHVINELILTAQERDGFGGLTVARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLV 369
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGG+ IK++ ++GA ++ + + PP R I G +QIE A+ L++E +
Sbjct: 370 IGKGGDNIKSINQQSGAHVE-LQRNPPPNTDPNLRIFTIRGIPQQIEVARHLIDEKVGGT 428
Query: 296 RIRNPAMAGGYSQQGYQARP--PTSWGTPGAPSMQQPGY---GYVQPGAYPGQTPQYNMS 350
+ P G + Q + P P G P + P + G+ +P + Q S
Sbjct: 429 SLGAP---GAFGQSPFSQPPAAPHQKG-PALLATSNPHWPQRGWQRPVGRVKENSQ--QS 482
Query: 351 QPPYGGYPSQPTPGGYPGNWD 371
QPP SQP Y W+
Sbjct: 483 QPP----SSQPD---YSKAWE 496
Score = 226 (84.6 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 60/205 (29%), Positives = 104/205 (50%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
T ++I IP +VG++IGK GETIK LQ ++G K+ + +D + + + + G P ++
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGAD-KPLRITGDPFKV 221
Query: 189 AKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQA 248
+A +++ +++ E + V + + G + +P VG+VIG+ GE IK +Q
Sbjct: 222 QQAREMVLEIIREKDQADFRGVRGDFSARVGGGSIEVSVPRFAVGIVIGRNGEMIKKIQN 281
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQ 308
G RIQ P S ER Q+ G ++ + A ++NE+I + R+ GG +
Sbjct: 282 DAGVRIQF----KPDDGISPERAAQVMGPPDRCQHAAHVINELILTAQERDGF--GGLTV 335
Query: 309 QGYQARPPTSWGTPGAPS-MQQPGY 332
+ R W GAP +Q+ Y
Sbjct: 336 ARGRGRGRGDWSV-GAPGGVQEITY 359
Score = 127 (49.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 226 KIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAK 285
K+P+ VG +IG+GGE I +QA +G +IQ+ ER + GT E IE AK
Sbjct: 83 KVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS----ESSGIPERPCVLTGTPESIEQAK 138
Query: 286 QLVNEVISENRIRN 299
+L+ +++ +R RN
Sbjct: 139 RLLGQIV--DRCRN 150
Score = 42 (19.8 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 21/74 (28%), Positives = 28/74 (37%)
Query: 497 QQGYG--TGQQPSPNTASYPPQGATQPSYGVP----PTSQSGYGSQVPPQSGYAGYGMPQ 550
Q+G+ G+ + S PP ++QP Y QS S P S Y M
Sbjct: 465 QRGWQRPVGRVKENSQQSQPP--SSQPDYSKAWEDYYKKQSHAASAAPQASSPPDYTMAW 522
Query: 551 AQKPLANPPAYGQT 564
A+ YGQT
Sbjct: 523 AEYYRQQVAFYGQT 536
>FB|FBgn0014870 [details] [associations]
symbol:Psi "P-element somatic inhibitor" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IMP;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005685
"U1 snRNP" evidence=IPI] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IDA] [GO:0048024 "regulation of mRNA splicing, via
spliceosome" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003729
GO:GO:0006397 GO:GO:0007283 GO:GO:0048025 GO:GO:0000381
EMBL:AL031863 InterPro:IPR015096 Pfam:PF09005 HSSP:Q96AE4
FlyBase:FBgn0014870 PIR:T13690 ProteinModelPortal:O96828 SMR:O96828
STRING:O96828 PRIDE:O96828 InParanoid:O96828 ArrayExpress:O96828
Bgee:O96828 Uniprot:O96828
Length = 806
Score = 218 (81.8 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 70/228 (30%), Positives = 117/228 (51%)
Query: 87 VENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTS--KKIEIPNIRVGVII 144
+ +GSGG G S ++I +A+ S GTS ++I +P G +
Sbjct: 94 MSSGSGGGGGGGGG-PGGASITQAIAQAAAVAARLAA--SAGTSCEEQIRLPESVAGAFM 150
Query: 145 GKSG-ETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAE 203
G+S +TI ++Q +SG K+QV +D + R + L G + + K ++I ++ A
Sbjct: 151 GRSSNDTITHIQAESGVKVQVMQDQD-------RVIMLRGQRDTVTKGREMIQNM---AN 200
Query: 204 SGGSGIVARRLT------GQAGSDHFA-MKIPNNKVGLVIGKGGETIKNMQARTGARIQV 256
G G V LT G +G + + IP KVGLVIGKGG+TIK +Q +TGA++ +
Sbjct: 201 RAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMII 260
Query: 257 IPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAG 304
I P + + ++I G +++IE AKQ+V ++I++ + G
Sbjct: 261 IQ-DGP--NQELIKPLRISGEAQKIEHAKQMVLDLIAQKDAQGQQQGG 305
Score = 216 (81.1 bits), Expect = 6.8e-18, Sum P(2) = 6.8e-18
Identities = 63/203 (31%), Positives = 104/203 (51%)
Query: 108 LKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRD 167
L +I P P Y YQ +I IP +VG++IGK G+TIK LQ ++GAK+ + +D
Sbjct: 210 LLTINMPPPGPSGYPPYQ------EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQD 263
Query: 168 -TEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAES--------------GGSGIVAR 212
+L P R + G ++I A+Q++ D++A+ ++ GG G+
Sbjct: 264 GPNQELIKPLR---ISGEAQKIEHAKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFN 320
Query: 213 RLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTV 272
G + + +P VG+VIGKGG+ I+ +Q G ++Q I D +R
Sbjct: 321 NFNNGNGGESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRC 377
Query: 273 QIDGTSEQIESAKQLVNEVISEN 295
I GT +Q++ AK+ ++ +I EN
Sbjct: 378 VIQGTRQQVDDAKRTIDGLI-EN 399
Score = 187 (70.9 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 72/266 (27%), Positives = 116/266 (43%)
Query: 128 GTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQ 187
G S ++ +P I VGV+IGK G+ I+ +Q + G K+Q + ++ R + GT +Q
Sbjct: 328 GESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGD--RRCVIQGTRQQ 385
Query: 188 IAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNK---------------- 231
+ A++ I+ ++ + T SD A K +K
Sbjct: 386 VDDAKRTIDGLIENVMVSRKYFIKEANTLPM-SDVIATKWHESKWQWRRRWPRRRLWQLQ 444
Query: 232 --VGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVN 289
+ +VIG+GGETIK + ++GA + + + E+ + GT++Q+E+A+Q+++
Sbjct: 445 LRLWIVIGRGGETIKLINQQSGAHTE---MDRNASNPPNEKLFKSKGTTDQVEAARQMIS 501
Query: 290 EVISE--NRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQY 347
E I+ N I + GG P G G Q + Q G Y GQ Q
Sbjct: 502 EKINMELNVISRKPIGGG---------PGGGGGNSGGG--QNNSHHNQQQGGYGGQN-QM 549
Query: 348 NMSQPPYG-GYPSQPTPGGY-PGNWD 371
P G GY QP G Y WD
Sbjct: 550 QGGDPNSGAGYQQQPWGGPYGQQGWD 575
Score = 84 (34.6 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 53/186 (28%), Positives = 67/186 (36%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYG-QAAPYDQQQGY--NSAAGYGNVNNTSQE 470
S P Q Q +Q GG A + Y Q A Y + G + A + N Q
Sbjct: 634 SSGPVQQQQPQQQQQSQQQTGGAGAGGADYSAQWAEYYRSVGKIEEAEAIEKTLKNKQQN 693
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS--YG--VP 526
G G + P P Q GQQ QP+P A+ A + YG +
Sbjct: 694 G-------SGGQSSTPNPSQGGP--GQQ------QPNPAAAAAAAAAAAAAAGGYGQSMT 738
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGS-AGGYGQPGYSHSQPP 585
PT + Y SQ + AG G PQ A P GQ+ PG+ G Y GY
Sbjct: 739 PTQYAQY-SQYYAAAAAAG-GQPQG----APQPGGGQSGGPPGNYPGNYPGAGYGGYPGA 792
Query: 586 PSSYAQ 591
P Q
Sbjct: 793 PGQQQQ 798
Score = 83 (34.3 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 27/63 (42%), Positives = 28/63 (44%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
P YSQ Y A + G P GAP QPG G Q G PG P N YGGYP
Sbjct: 739 PTQYAQYSQ--YYAAAAAAGGQPQGAP---QPGGG--QSGGPPGNYPG-NYPGAGYGGYP 790
Query: 359 SQP 361
P
Sbjct: 791 GAP 793
Score = 76 (31.8 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 43/192 (22%), Positives = 62/192 (32%)
Query: 418 ASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGY-GNVNNTSQEGHTPSY 476
A+G GQ Y+ + Y+ + +A +QQ A G G V + S
Sbjct: 592 AAGGASGGQDYSAQ-WIEYYKQMGCHREAEMIEQQMKAKQAGGSSGPVQQQQPQQQQQSQ 650
Query: 477 GAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSP--NTASYPPQGATQPSYGVPPTSQSGYG 534
G + + A + G ++ T Q + P SQ G G
Sbjct: 651 QQTGGAGAGGADYSAQWAEYYRSVGKIEEAEAIEKTLKNKQQNGSGGQSSTPNPSQGGPG 710
Query: 535 SQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ--PGYSHSQPPPSSYAQP 592
Q P + A A A YGQ+ +P Y Q + + P QP
Sbjct: 711 QQQPNPAAAAAAAAAAA----AAAGGYGQSM-TPTQYAQYSQYYAAAAAAGGQPQGAPQP 765
Query: 593 DSGSQRAPPSNY 604
G PP NY
Sbjct: 766 GGGQSGGPPGNY 777
Score = 76 (31.8 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 45/202 (22%), Positives = 66/202 (32%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ----QGYNSAAGYGNVN 465
GY G G GY Q +GG + Q G+ + Q QG ++A G
Sbjct: 542 GYGGQNQMQGGDPNSGAGYQQQPWGGPYG-QQGWDPSGQQQQMAMANQGGSAAGGASGGQ 600
Query: 466 NTSQEG--HTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY 523
+ S + + G ++ +++ A G G QQP S G
Sbjct: 601 DYSAQWIEYYKQMGCHREAEMIEQQMKAKQAGGSSGPVQQQQPQQQQQSQQQTGGA---- 656
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
G S ++ G +K L N G QS G PG Q
Sbjct: 657 GAGGADYSAQWAEYYRSVGKIEEA-EAIEKTLKNKQQNGSGGQSSTPNPSQGGPG--QQQ 713
Query: 584 PPPSSYAQPDSGSQRAPPSNYG 605
P P++ A + + A YG
Sbjct: 714 PNPAAAAAA-AAAAAAAAGGYG 734
Score = 73 (30.8 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 28/83 (33%), Positives = 34/83 (40%)
Query: 299 NPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGY-VQPGAYPGQTPQYNMSQPPYGGY 357
NP+ GG QQ Q P + A + GYG + P Y Q QY + GG
Sbjct: 703 NPSQ-GGPGQQ--QPNPAAAAAAAAAAAAAAGGYGQSMTPTQY-AQYSQYYAAAAAAGGQ 758
Query: 358 PS-QPTPGG---------YPGNW 370
P P PGG YPGN+
Sbjct: 759 PQGAPQPGGGQSGGPPGNYPGNY 781
Score = 68 (29.0 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 39/155 (25%), Positives = 51/155 (32%)
Query: 454 GYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGT--GQQPSPNTA 511
G NS G N ++ Q+G YG Q P S A QQ +G GQQ
Sbjct: 524 GGNSGGGQNNSHHNQQQG---GYGGQNQMQGGDP--NSGAGYQQQPWGGPYGQQ------ 572
Query: 512 SYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA 571
+ P G Q + S G Q A + Q + Q A
Sbjct: 573 GWDPSGQQQ-QMAMANQGGSAAGGASGGQDYSAQWIEYYKQMGCHREAEMIEQQMKAKQA 631
Query: 572 GGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYGA 606
GG P QP +Q +G A ++Y A
Sbjct: 632 GGSSGP-VQQQQPQQQQQSQQQTGGAGAGGADYSA 665
Score = 64 (27.6 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 21/47 (44%), Positives = 21/47 (44%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQTPQ 346
A AGG Q Q S G PG PG GY PGA PGQ Q
Sbjct: 753 AAAGGQPQGAPQPGGGQSGGPPGNYPGNYPGAGYGGYPGA-PGQQQQ 798
Score = 59 (25.8 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 26/94 (27%), Positives = 30/94 (31%)
Query: 488 PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYG 547
P+ G G GQ S + G G P S +GY Q P G YG
Sbjct: 515 PIGGGPGGGGGNSGGGQNNSHHNQQQGGYGGQNQMQGGDPNSGAGYQQQ--PWGG--PYG 570
Query: 548 MPQAQKPLANPPAYGQTQQSPGSAGGY-GQPGYS 580
Q P Q +AGG G YS
Sbjct: 571 Q-QGWDPSGQQQQMAMANQGGSAAGGASGGQDYS 603
Score = 57 (25.1 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 25/70 (35%), Positives = 28/70 (40%)
Query: 301 AMAGGYSQQ--GYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
A AGGY Q Q + + A + QP G QPG P N P G YP
Sbjct: 728 AAAGGYGQSMTPTQYAQYSQYYAAAAAAGGQP-QGAPQPGGGQSGGPPGNY---P-GNYP 782
Query: 359 SQPTPGGYPG 368
GGYPG
Sbjct: 783 GAGY-GGYPG 791
Score = 55 (24.4 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 36/135 (26%), Positives = 45/135 (33%)
Query: 420 GYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQ 479
G N Q YGG + Q G + QQQ + YG Q+G PS
Sbjct: 530 GQNNSHHNQQQGGYGGQNQMQGGDPNSGAGYQQQPWGGP--YG------QQGWDPS---- 577
Query: 480 GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQ-GATQPSYGVPPTSQSGYGSQVP 538
G Q Q +A G G GQ S Y Q G + + + Q Q
Sbjct: 578 GQQQQMAMANQGGSAAG--GASGGQDYSAQWIEYYKQMGCHREAEMI---EQQMKAKQAG 632
Query: 539 PQSGYAGYGMPQAQK 553
SG PQ Q+
Sbjct: 633 GSSGPVQQQQPQQQQ 647
Score = 50 (22.7 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 555 LANPPAYGQTQQSPGSAGGYGQPG 578
+A A GQ Q G GG G PG
Sbjct: 293 IAQKDAQGQQQGGRGGGGGGGGPG 316
Score = 50 (22.7 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 23/76 (30%), Positives = 27/76 (35%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYH---APQSGYGQAA-PYDQQQGYNSAAGYGNV- 464
GY S P Y Q Q YA + G APQ G GQ+ P G AGYG
Sbjct: 732 GYGQSMTPTQ-YAQYSQYYAAAAAAGGQPQGAPQPGGGQSGGPPGNYPGNYPGAGYGGYP 790
Query: 465 --------NNTSQEGH 472
+ + H
Sbjct: 791 GAPGQQQQKSHKNDNH 806
>WB|WBGene00016489 [details] [associations]
symbol:C36E6.1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 eggNOG:NOG300923 InterPro:IPR015096
Pfam:PF09005 GeneTree:ENSGT00650000093048 HSSP:Q96AE4 EMBL:FO080802
GeneID:181773 KEGG:cel:CELE_C36E6.1 CTD:181773 HOGENOM:HOG000018892
RefSeq:NP_510825.1 ProteinModelPortal:Q9BLA0 SMR:Q9BLA0
STRING:Q9BLA0 PaxDb:Q9BLA0 PRIDE:Q9BLA0 EnsemblMetazoa:C36E6.1b
UCSC:C36E6.1a WormBase:C36E6.1b InParanoid:Q9BLA0 OMA:IQLIQEN
NextBio:915282 ArrayExpress:Q9BLA0 Uniprot:Q9BLA0
Length = 641
Score = 241 (89.9 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 86/275 (31%), Positives = 125/275 (45%)
Query: 112 PAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEAD 171
PA SA+ G +M S ++++P VG I+G G+ IK L ++G KIQ D +
Sbjct: 232 PA-SAMMAGNGPVATM--SLQVKVPRCTVGAIMGLQGKNIKKLSDETGTKIQFLPDDDPK 288
Query: 172 LNSPTRSVELMGTPEQIAKAEQLINDVL-AEAESGGSGIVARRLTGQAGSDHFAMKIPNN 230
L RS+ ++G ++ QLI ++ A +E+ + +V F M IP +
Sbjct: 289 LME--RSLAIIGNKNKVYVCAQLIKAIVEANSEAANAPVVL-----------FYMVIPAS 335
Query: 231 KVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNE 290
K GLVIG+GGETIK + +GA + L P E+T I G+ Q+E AK L+
Sbjct: 336 KCGLVIGRGGETIKQINQESGAHCE---LSRDPNTNPIEKTFVIRGSEAQVEHAKHLIRV 392
Query: 291 VISENRIRNPAMAGGYSQQGYQARPPTS----------------W-GTPGAPSMQQPGYG 333
+ + P G Q Q +PP W G P QQP +
Sbjct: 393 KVGDIPPNTPYTPAGMPQPQPQQQPPQMVQVQPNLQGQQPNMQMWAGQPLVQQPQQPHHI 452
Query: 334 YVQPGA-YPGQTPQYNMSQPPYGGYPSQPTPGGYP 367
+ QP +P Q PQ + PP GYP+Q YP
Sbjct: 453 HQQPAQLHPVQLPQ--VMAPP--GYPTQ---AAYP 480
Score = 180 (68.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 47/166 (28%), Positives = 84/166 (50%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTE-ADLNSPTRSVELMGTPEQIAK 190
+I IP + G IIGK GE ++ L+ + +Q+ +D AD P +++ G P+Q+ +
Sbjct: 160 EIPIPANKCGAIIGKGGEQMRKLRSWTNCNVQLLQDNNIADTVKP---LKITGDPKQVEQ 216
Query: 191 AEQLINDVLA-EAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQAR 249
L+ D+LA ++ S ++A G + +K+P VG ++G G+ IK +
Sbjct: 217 CRLLVADILACNDDTPASAMMAGN--GPVATMSLQVKVPRCTVGAIMGLQGKNIKKLSDE 274
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
TG +IQ +P P ER++ I G ++ QL+ ++ N
Sbjct: 275 TGTKIQFLPDDDPK---LMERSLAIIGNKNKVYVCAQLIKAIVEAN 317
Score = 162 (62.1 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 49/184 (26%), Positives = 93/184 (50%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ +P VG++IG++G ++ + +SG ++QVT + + R VE+ G PE I +A+
Sbjct: 59 VPVPEQCVGLVIGRNGAEVQAISQKSGCRVQVTVQPSS---TGFRLVEIYGIPENIERAK 115
Query: 193 QLINDVLAEA--ESGG----------SGIVARRLT-GQAGSDHFAMKIPNNKVGLVIGKG 239
I++V+ + G GI + + G + IP NK G +IGKG
Sbjct: 116 AYISEVVTRGTRQPGPLCQPVVHVQTHGIKSPVVDQGDPSKITIEIPIPANKCGAIIGKG 175
Query: 240 GETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRN 299
GE ++ +++ T +Q++ + T + ++I G +Q+E + LV ++++ N
Sbjct: 176 GEQMRKLRSWTNCNVQLLQDN---NIADTVKPLKITGDPKQVEQCRLLVADILACND-DT 231
Query: 300 PAMA 303
PA A
Sbjct: 232 PASA 235
Score = 77 (32.2 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 22/61 (36%), Positives = 25/61 (40%)
Query: 537 VPPQSGYAGYGMPQAQKPLANPPAYGQTQ-----QSPGSAGGYGQPGYSHSQPPPSSYAQ 591
+PP + Y GMPQ Q P PP Q Q Q P GQP Q P + Q
Sbjct: 397 IPPNTPYTPAGMPQPQ-PQQQPPQMVQVQPNLQGQQPNMQMWAGQPLVQQPQQPHHIHQQ 455
Query: 592 P 592
P
Sbjct: 456 P 456
Score = 51 (23.0 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 36/145 (24%), Positives = 46/145 (31%)
Query: 437 HAPQSGYGQAAP-YDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAM 495
H Q A P Y Q Y A Y TS P AQ Q VQ++ +
Sbjct: 460 HPVQLPQVMAPPGYPTQAAYPPQAVY---QQTSVAAWHPMQQAQPQQQQY---VQAAIPV 513
Query: 496 GQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPL 555
Q Y QQP+P Q + Q +Q+ Q A Q + +
Sbjct: 514 SQAMYQPPQQPAPAPVETGLSLYAQYAMQAAAQQQEQQRAQMAAQQE-AKLAKQQTTQQV 572
Query: 556 ANPPAYGQTQQSPGSAGGYGQPGYS 580
A Q S G + G YS
Sbjct: 573 AQKDT-ASAQNSTGGSAKDGDADYS 596
>FB|FBgn0028573 [details] [associations]
symbol:prc "pericardin" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=NAS] [GO:0007507
"heart development" evidence=IMP;TAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0035088 "establishment or
maintenance of apical/basal cell polarity" evidence=TAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0002009
"morphogenesis of an epithelium" evidence=TAS] GO:GO:0002009
GO:GO:0007507 GO:GO:0005578 FlyBase:FBgn0028573 InterPro:IPR009765
Pfam:PF07054 EMBL:AF203342 STRING:Q9U617 PRIDE:Q9U617
InParanoid:Q9U617 ArrayExpress:Q9U617 Bgee:Q9U617 Uniprot:Q9U617
Length = 1729
Score = 213 (80.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 81/214 (37%), Positives = 91/214 (42%)
Query: 410 GYSYSQPPASGYNQQGQ-GY-AQDSYGGYH-APQSGYG-QAAPYDQ----QQGYNSAAGY 461
GY +QP G GQ GY +Q GG A Q GYG Q Q Q GY S G
Sbjct: 978 GYG-TQPGIGGQTAAGQPGYGSQPGIGGQTGAGQPGYGSQTGVGGQIGAGQPGYGSQPGI 1036
Query: 462 GNVNNTSQEGH--TPSYGAQ-GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA 518
G Q G+ P +G Q G Q P V GQ GYG+ QP + GA
Sbjct: 1037 GGQTGAGQPGYGAQPGFGGQPGYGNQ--PGVGGQTGAGQPGYGS--QPGVGGQT----GA 1088
Query: 519 TQPSYGVPPT--SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGY-- 574
QP YGV P Q G G Q +G GYG Q + P YG TQQ G G
Sbjct: 1089 GQPGYGVIPGFGGQPGIGGQTA--AGKPGYG---GQPGIGGSPVYG-TQQGTGGPSGISG 1142
Query: 575 GQPGYSHSQPPPSSYAQPDSGSQRAPPSNYGAAT 608
GQPGY +QP + QP GS P G AT
Sbjct: 1143 GQPGYG-TQPGQTGAGQPGYGSL---PGTGGQAT 1172
Score = 202 (76.2 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 72/201 (35%), Positives = 84/201 (41%)
Query: 410 GYSYSQPPASGYNQQGQ-GY-AQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNT 467
GY SQP G GQ GY +Q GG Q+G GQ Y Q G + G G
Sbjct: 552 GYG-SQPGIGGQTGAGQPGYGSQPGIGG----QTGAGQPG-YGTQPGVGAQTGTGQPGYG 605
Query: 468 SQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPP 527
SQ G GA + P + GQ GYG+ T + P TQP G
Sbjct: 606 SQPGVGTQIGAGQPGYGSQPGIGGQTGAGQPGYGSQPGIGGQTGAAQPGYGTQPGVGAQT 665
Query: 528 -TSQSGYGSQVPPQSGYAGYGMP-QAQKP----LANP--PAYGQTQQSPGSAGGYGQPGY 579
T Q GYG+Q P G G G P ++P P P YG TQ G+ G GQPGY
Sbjct: 666 GTGQPGYGAQ-PGIGGQTGAGQPGYGRQPGIGGQTGPGQPGYG-TQPGVGTQTGTGQPGY 723
Query: 580 SHSQPP---PSSYAQPDSGSQ 597
+QP S QP GSQ
Sbjct: 724 G-AQPGIGGQSGAGQPGYGSQ 743
Score = 199 (75.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 78/221 (35%), Positives = 90/221 (40%)
Query: 410 GYSYSQPPASGYNQQGQ-GYA-QDSYGGYHAP-QSGYG-QAAPYDQ----QQGYNSAAGY 461
GY +QP G GQ GY Q GG P Q GYG Q Q Q GY S G
Sbjct: 348 GYG-TQPGIGGQTGAGQPGYGTQPGIGGQTGPGQPGYGTQPGIGGQTGPGQPGYGSQPGI 406
Query: 462 GNVNNTSQEGH--TPSYGAQGDSTQ----APPPVQSSAAMGQQGYGTGQQPSPNTASYPP 515
G Q G+ P G Q + Q P + + GQ GYGT T + P
Sbjct: 407 GGQTGAGQPGYGTQPGIGGQTGAGQPGYGTQPGIGAQTGAGQPGYGTQPGIGGQTGAGQP 466
Query: 516 QGATQPSYGVPP-TSQSGYGSQ--VPPQSGYA--GYG-MPQ-AQKPLANPPAYGQTQQSP 568
TQP GV Q GYGSQ + Q+G GYG P + A P YG +Q
Sbjct: 467 GYGTQPGIGVQTGAGQPGYGSQPGIGAQTGAGQPGYGSQPGIGGQTGAGQPGYG-SQPGI 525
Query: 569 GSAGGYGQPGYSHSQP---PPSSYAQPDSGSQRAPPSNYGA 606
G G GQPGY +QP + QP GSQ GA
Sbjct: 526 GGQTGAGQPGYG-TQPGIGAQTGAGQPGYGSQPGIGGQTGA 565
Score = 189 (71.6 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 74/216 (34%), Positives = 85/216 (39%)
Query: 410 GYSYSQPPASGYNQQGQ-GY-AQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNT 467
GY SQP G GQ GY +Q GG Q+G GQ Y Q G + G G
Sbjct: 501 GYG-SQPGIGGQTGAGQPGYGSQPGIGG----QTGAGQPG-YGTQPGIGAQTGAGQPGYG 554
Query: 468 SQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP- 526
SQ G GA + P + GQ GYGT T + P +QP G
Sbjct: 555 SQPGIGGQTGAGQPGYGSQPGIGGQTGAGQPGYGTQPGVGAQTGTGQPGYGSQPGVGTQI 614
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQ--AQKPL-----ANPPAYGQTQQSPGSAGGYGQPGY 579
Q GYGSQ P G G G P +Q + A P YG TQ G+ G GQPGY
Sbjct: 615 GAGQPGYGSQ-PGIGGQTGAGQPGYGSQPGIGGQTGAAQPGYG-TQPGVGAQTGTGQPGY 672
Query: 580 SHSQP---------PPSSYAQPDSGSQRAPPS-NYG 605
+QP P QP G Q P YG
Sbjct: 673 G-AQPGIGGQTGAGQPGYGRQPGIGGQTGPGQPGYG 707
Score = 188 (71.2 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 76/213 (35%), Positives = 85/213 (39%)
Query: 410 GYSYSQPPASGYNQQGQ-GY-AQDSYGGYH-APQSGYG-QAAPYDQ----QQGYNSAAGY 461
GY SQP G GQ GY +Q GG A Q GYG Q Q Q GY S G
Sbjct: 263 GYG-SQPGIGGQTGAGQPGYGSQPGIGGQTGAGQPGYGTQPGIGGQTGAGQPGYGSQPGI 321
Query: 462 GNVNNTSQEGH--TPSYGAQGDSTQ----APPPVQSSAAMGQQGYGTGQQPSPNTASYPP 515
G Q G+ P G Q + Q P + GQ GYGT T P
Sbjct: 322 GGQTGAGQPGYGSQPGIGGQTGAGQPGYGTQPGIGGQTGAGQPGYGTQPGIGGQTGPGQP 381
Query: 516 QGATQPSYGVPP-TSQSGYGSQVPPQSGYAGYGMPQ--AQKPL-----ANPPAYGQTQQS 567
TQP G Q GYGSQ P G G G P Q + A P YG TQ
Sbjct: 382 GYGTQPGIGGQTGPGQPGYGSQ-PGIGGQTGAGQPGYGTQPGIGGQTGAGQPGYG-TQPG 439
Query: 568 PGSAGGYGQPGYSHSQPP---PSSYAQPDSGSQ 597
G+ G GQPGY +QP + QP G+Q
Sbjct: 440 IGAQTGAGQPGYG-TQPGIGGQTGAGQPGYGTQ 471
Score = 187 (70.9 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 73/210 (34%), Positives = 82/210 (39%)
Query: 410 GYSYSQPPASGYNQQGQ-GY-AQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNT 467
GY SQP G GQ GY +Q GG Q+G GQ Y Q G G G
Sbjct: 212 GYG-SQPGIGGQTGAGQPGYGSQPGIGG----QTGAGQPG-YGSQPGIGGQTGAGQPGYG 265
Query: 468 SQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPP 527
SQ G GA + P + GQ GYGT T + P +QP G
Sbjct: 266 SQPGIGGQTGAGQPGYGSQPGIGGQTGAGQPGYGTQPGIGGQTGAGQPGYGSQPGIGGQT 325
Query: 528 -TSQSGYGSQVPPQSGYAGYGMPQ--AQKPL-----ANPPAYGQTQQSPGSAGGYGQPGY 579
Q GYGSQ P G G G P Q + A P YG TQ G G GQPGY
Sbjct: 326 GAGQPGYGSQ-PGIGGQTGAGQPGYGTQPGIGGQTGAGQPGYG-TQPGIGGQTGPGQPGY 383
Query: 580 SHSQPP---PSSYAQPDSGSQRAPPSNYGA 606
+QP + QP GSQ GA
Sbjct: 384 G-TQPGIGGQTGPGQPGYGSQPGIGGQTGA 412
Score = 182 (69.1 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 74/219 (33%), Positives = 89/219 (40%)
Query: 410 GYSYSQPPASGYNQQGQ-GY-AQDSYGGYH-APQSGYGQAAPYDQQQGYNSAAGYG---N 463
GY SQP G GQ GY +Q GG A Q GYG Q G GYG
Sbjct: 620 GYG-SQPGIGGQTGAGQPGYGSQPGIGGQTGAAQPGYGTQPGVGAQTG-TGQPGYGAQPG 677
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY 523
+ + G P YG Q P + GQ GYGT QP T + G QP Y
Sbjct: 678 IGGQTGAGQ-PGYGRQ-------PGIGGQTGPGQPGYGT--QPGVGTQT----GTGQPGY 723
Query: 524 GVPP-------TSQSGYGSQ--VPPQSG--YAGYGMPQAQKPLANPPAYGQTQQSPGSAG 572
G P Q GYGSQ + Q+G GYG + A P+YG +Q G+
Sbjct: 724 GAQPGIGGQSGAGQPGYGSQPGIGGQTGGGQPGYGSQIGGQTGAGQPSYG-SQPGVGAQN 782
Query: 573 GYGQPGYSHSQPP---PSSYAQPDSGSQRAPPSNYGAAT 608
G GQPGY ++P + QP G Q + G T
Sbjct: 783 GGGQPGYG-TRPVIGGQTGAGQPGYGGQTGVGGSPGFLT 820
Score = 181 (68.8 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 72/203 (35%), Positives = 82/203 (40%)
Query: 410 GYSYSQPPASGYNQQGQ-GYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
GY +QP G GQ GY G Q+G GQ Y Q G + G G S
Sbjct: 450 GYG-TQPGIGGQTGAGQPGYGTQPGIGV---QTGAGQPG-YGSQPGIGAQTGAGQPGYGS 504
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
Q G GA + P + GQ GYGT QP + GA QP YG
Sbjct: 505 QPGIGGQTGAGQPGYGSQPGIGGQTGAGQPGYGT--QPGIGAQT----GAGQPGYG---- 554
Query: 529 SQSGYGSQVPPQSGYAGYG-MPQ-AQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPP 586
SQ G G Q +G GYG P + A P YG TQ G+ G GQPGY SQP
Sbjct: 555 SQPGIGGQTG--AGQPGYGSQPGIGGQTGAGQPGYG-TQPGVGAQTGTGQPGYG-SQPGV 610
Query: 587 SSY---AQPDSGSQRAPPSNYGA 606
+ QP GSQ GA
Sbjct: 611 GTQIGAGQPGYGSQPGIGGQTGA 633
Score = 179 (68.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 78/216 (36%), Positives = 88/216 (40%)
Query: 410 GYSYSQPPASGYNQQGQ-GY-AQDSYGGYH-APQSGYG-QAAPYDQ----QQGYNSAAGY 461
GY SQP G GQ GY +Q G A Q GYG Q Q Q GY S G
Sbjct: 144 GYG-SQPGIGGQTATGQPGYGSQLGVGAQAGAGQPGYGAQPGVGAQTGAGQPGYGSQTGI 202
Query: 462 GNVNNTSQEGH--TPSYGAQGDSTQ----APPPVQSSAAMGQQGYGTGQQPSPNTASYPP 515
G Q G+ P G Q + Q + P + GQ GYG+ QP +
Sbjct: 203 GGQTGAGQPGYGSQPGIGGQTGAGQPGYGSQPGIGGQTGAGQPGYGS--QPGIGGQT--- 257
Query: 516 QGATQPSYGVPPTSQSGYGSQVPPQSGYAGYG-MPQ-AQKPLANPPAYGQTQQSPGSAGG 573
GA QP YG SQ G G Q +G GYG P + A P YG TQ G G
Sbjct: 258 -GAGQPGYG----SQPGIGGQTG--AGQPGYGSQPGIGGQTGAGQPGYG-TQPGIGGQTG 309
Query: 574 YGQPGYSHSQPP---PSSYAQPDSGSQRAPPSNYGA 606
GQPGY SQP + QP GSQ GA
Sbjct: 310 AGQPGYG-SQPGIGGQTGAGQPGYGSQPGIGGQTGA 344
Score = 161 (61.7 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 65/176 (36%), Positives = 74/176 (42%)
Query: 410 GYSYSQPPASGYNQQGQ-GY-AQDSYGGYH-APQSGYGQAAPYDQQQGYN--SAAGYGNV 464
GY +QP G GQ GY +Q GG A Q GYG + Q G +AAG
Sbjct: 1058 GYG-NQPGVGGQTGAGQPGYGSQPGVGGQTGAGQPGYGVIPGFGGQPGIGGQTAAGKPGY 1116
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYG 524
G +P YG Q T P S + GQ GYGT QP GA QP YG
Sbjct: 1117 GGQPGIGGSPVYGTQ-QGTGGP----SGISGGQPGYGT--QPGQT-------GAGQPGYG 1162
Query: 525 VPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGY--GQPG 578
P G G Q +G GYG P +Q + P YG TQ G G GQPG
Sbjct: 1163 SLP----GTGGQAT--AGQPGYG-PGSQPGIGGAPVYG-TQPGGGGQTGVIGGQPG 1210
Score = 158 (60.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 59/171 (34%), Positives = 66/171 (38%)
Query: 415 QPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTP 474
QP G Q G G Q YG P G GQ +Q GY + G G Q G+
Sbjct: 944 QPGIGG--QTGAG--QPGYGFIGQPGIG-GQTGTSGRQPGYGTQPGIGGQTAAGQPGYGS 998
Query: 475 SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYP----PQGATQPSYGVPPT-- 528
G G + P S +G Q G GQ P S P GA QP YG P
Sbjct: 999 QPGIGGQTGAGQPGYGSQTGVGGQ-IGAGQ---PGYGSQPGIGGQTGAGQPGYGAQPGFG 1054
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
Q GYG+Q P G G G P YG +Q G G GQPGY
Sbjct: 1055 GQPGYGNQ-PGVGGQTGAGQP----------GYG-SQPGVGGQTGAGQPGY 1093
Score = 157 (60.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 59/172 (34%), Positives = 70/172 (40%)
Query: 452 QQGYNSAAGYGNVNNTSQEGHTPSYG--AQGDSTQ----APPPVQSSAAMGQQGYGTGQQ 505
Q GY S G G T Q G+ G AQ + Q A P V + GQ GYG+
Sbjct: 142 QPGYGSQPGIGGQTATGQPGYGSQLGVGAQAGAGQPGYGAQPGVGAQTGAGQPGYGSQTG 201
Query: 506 PSPNTASYPPQGATQPSYGVPP-TSQSGYGSQVPPQSGYAGYGMPQ--AQKPL-----AN 557
T + P +QP G Q GYGSQ P G G G P +Q + A
Sbjct: 202 IGGQTGAGQPGYGSQPGIGGQTGAGQPGYGSQ-PGIGGQTGAGQPGYGSQPGIGGQTGAG 260
Query: 558 PPAYGQTQQSPGSAGGYGQPGYSHSQPP---PSSYAQPDSGSQRAPPSNYGA 606
P YG +Q G G GQPGY SQP + QP G+Q GA
Sbjct: 261 QPGYG-SQPGIGGQTGAGQPGYG-SQPGIGGQTGAGQPGYGTQPGIGGQTGA 310
Score = 147 (56.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 66/207 (31%), Positives = 76/207 (36%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHA-------PQSGYGQAAPYDQQQGYNSAAGYGNVN 465
Y P G +Q G G Q YGG Q GYG A GY + G G +
Sbjct: 859 YGSQPGIG-DQTGAG--QSGYGGQPGISGQTGGGQPGYGGQATISGLPGYGTQPGIGALT 915
Query: 466 NTSQEGH-----TPSYGAQGDSTQ----APPPVQSSAAMGQQGYG-TGQQPSPNTASYPP 515
GH P G Q + Q P + GQ GYG GQ P
Sbjct: 916 AVPG-GHYGYETQPGIGGQTGTNQPGFGGQPGIGGQTGAGQPGYGFIGQ---PGIGGQTG 971
Query: 516 QGATQPSYGVPPTSQSGYGSQVPPQSGYAGYG-MPQ-AQKPLANPPAYGQTQQSPGSAGG 573
QP YG P G G Q +G GYG P + A P YG +Q G G
Sbjct: 972 TSGRQPGYGTQP----GIGGQTA--AGQPGYGSQPGIGGQTGAGQPGYG-SQTGVGGQIG 1024
Query: 574 YGQPGYSHSQPP---PSSYAQPDSGSQ 597
GQPGY SQP + QP G+Q
Sbjct: 1025 AGQPGYG-SQPGIGGQTGAGQPGYGAQ 1050
Score = 145 (56.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 70/215 (32%), Positives = 80/215 (37%)
Query: 410 GYSYSQPPASGYNQQGQ-GYAQ-DSYGGYHAPQSGYGQAA---P-YDQQQGYNSAAGYGN 463
GY SQP G GQ GY +GG P G GQ A P Y Q G + YG
Sbjct: 1075 GYG-SQPGVGGQTGAGQPGYGVIPGFGGQ--PGIG-GQTAAGKPGYGGQPGIGGSPVYGT 1130
Query: 464 VNNTSQ----EGHTPSYGAQGDSTQAPPPVQSS-------AAMGQQGYGTGQQPSPNTAS 512
T G P YG Q T A P S A GQ GYG G QP A
Sbjct: 1131 QQGTGGPSGISGGQPGYGTQPGQTGAGQPGYGSLPGTGGQATAGQPGYGPGSQPGIGGA- 1189
Query: 513 YPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQS-PGSA 571
P G TQP G G Q+ + G GYG Q + P Y Q+ PG+
Sbjct: 1190 -PVYG-TQPGGGGQTGVIGGQPGQIGDRVGQPGYGTQTGQ--IGAPGRYTDGSQTVPGAV 1245
Query: 572 GGYGQPGYSHSQPPPS-SYAQPDSGSQRAPPSNYG 605
G G S + S A+ G +A S G
Sbjct: 1246 GTGGVVAAGTSGADDAFSQAESSIGDGQASASAQG 1280
Score = 144 (55.7 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 64/208 (30%), Positives = 80/208 (38%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
S+ SG + GQ +Q S G + SGY Y A+G G +
Sbjct: 74 SRSTVSGTHGMGQAQSQFSSGDCNGC-SGY--QTDYPSSGRILDASGSGGIGRPDSIISL 130
Query: 474 PS-YGAQGDSTQ----APPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPP- 527
P G Q + Q + P + A GQ GYG+ + P QP G
Sbjct: 131 PGGVGGQTGAGQPGYGSQPGIGGQTATGQPGYGSQLGVGAQAGAGQPGYGAQPGVGAQTG 190
Query: 528 TSQSGYGSQ--VPPQSGYA--GYG-MPQ-AQKPLANPPAYGQTQQSPGSAGGYGQPGYSH 581
Q GYGSQ + Q+G GYG P + A P YG +Q G G GQPGY
Sbjct: 191 AGQPGYGSQTGIGGQTGAGQPGYGSQPGIGGQTGAGQPGYG-SQPGIGGQTGAGQPGYG- 248
Query: 582 SQPP---PSSYAQPDSGSQRAPPSNYGA 606
SQP + QP GSQ GA
Sbjct: 249 SQPGIGGQTGAGQPGYGSQPGIGGQTGA 276
Score = 126 (49.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 61/196 (31%), Positives = 71/196 (36%)
Query: 410 GYSYSQPPASGYNQQGQ-GYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGN---VN 465
GY SQP G GQ GY G A Q YG Q G GYG +
Sbjct: 739 GYG-SQPGIGGQTGGGQPGYGSQIGGQTGAGQPSYGSQPGVGAQNG-GGQPGYGTRPVIG 796
Query: 466 NTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG-----YGTGQQPSPNTASYPPQGATQ 520
+ G P YG Q +P + G G G GQ + + G
Sbjct: 797 GQTGAGQ-PGYGGQTGVGGSPGFLTQPGIGGISGPIGGKVGGGQSEAAKPGYWAQPGIGG 855
Query: 521 PS-YGVPP-------TSQSGYGSQVPPQSGYAGYGMPQ--AQKPLANPPAYGQTQQSPGS 570
PS YG P QSGYG Q P SG G G P Q ++ P YG TQ G+
Sbjct: 856 PSRYGSQPGIGDQTGAGQSGYGGQ-PGISGQTGGGQPGYGGQATISGLPGYG-TQPGIGA 913
Query: 571 AGGY--GQPGYSHSQP 584
G GY +QP
Sbjct: 914 LTAVPGGHYGYE-TQP 928
Score = 92 (37.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 32/77 (41%), Positives = 36/77 (46%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQT----PQYNMSQPP 353
P + G G Q GY ++P G G QPGYG QPG GQT P Y +QP
Sbjct: 319 PGIGGQTGAGQPGYGSQP----GIGGQTGAGQPGYG-TQPGI-GGQTGAGQPGYG-TQPG 371
Query: 354 YGGY--PSQPTPGGYPG 368
GG P QP G PG
Sbjct: 372 IGGQTGPGQPGYGTQPG 388
Score = 90 (36.7 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 32/81 (39%), Positives = 34/81 (41%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGT-PGAPSM-QQPGYGYV----QPG--AYPGQTPQYNM 349
P + G G Q GY +P T PG P QPG G QPG A PG Q
Sbjct: 676 PGIGGQTGAGQPGYGRQPGIGGQTGPGQPGYGTQPGVGTQTGTGQPGYGAQPGIGGQSGA 735
Query: 350 SQPPYGGYPS--QPTPGGYPG 368
QP YG P T GG PG
Sbjct: 736 GQPGYGSQPGIGGQTGGGQPG 756
Score = 88 (36.0 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 28/66 (42%), Positives = 32/66 (48%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPS--QPT 362
G Q GY ++P G G QPGYG QPG + GQ P Y +QP GG QP
Sbjct: 1024 GAGQPGYGSQP----GIGGQTGAGQPGYG-AQPG-FGGQ-PGYG-NQPGVGGQTGAGQPG 1075
Query: 363 PGGYPG 368
G PG
Sbjct: 1076 YGSQPG 1081
Score = 86 (35.3 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 28/74 (37%), Positives = 34/74 (45%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQTPQYNMSQPPYGG 356
P + G G +Q G+ +P G G QPGYG++ QPG GQT QP YG
Sbjct: 928 PGIGGQTGTNQPGFGGQP----GIGGQTGAGQPGYGFIGQPGI-GGQTGTSGR-QPGYGT 981
Query: 357 YPS--QPTPGGYPG 368
P T G PG
Sbjct: 982 QPGIGGQTAAGQPG 995
Score = 86 (35.3 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 34/83 (40%), Positives = 37/83 (44%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQT----PQYNMSQPP 353
P + G G Q GY ++P G G QPGYG QPG GQT P Y SQP
Sbjct: 268 PGIGGQTGAGQPGYGSQP----GIGGQTGAGQPGYG-TQPGI-GGQTGAGQPGYG-SQPG 320
Query: 354 YGG--------YPSQPTPGGYPG 368
GG Y SQP GG G
Sbjct: 321 IGGQTGAGQPGYGSQPGIGGQTG 343
Score = 85 (35.0 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 30/71 (42%), Positives = 33/71 (46%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P + G G Q GY ++P G G QPGYG QPG GQT QP YG
Sbjct: 234 PGIGGQTGAGQPGYGSQP----GIGGQTGAGQPGYGS-QPGI-GGQT---GAGQPGYG-- 282
Query: 358 PSQPTPGGYPG 368
SQP GG G
Sbjct: 283 -SQPGIGGQTG 292
Score = 84 (34.6 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 30/71 (42%), Positives = 32/71 (45%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P + G G Q GY +P G G QPGYG QPG GQT QP YG
Sbjct: 353 PGIGGQTGAGQPGYGTQP----GIGGQTGPGQPGYG-TQPGI-GGQT---GPGQPGYG-- 401
Query: 358 PSQPTPGGYPG 368
SQP GG G
Sbjct: 402 -SQPGIGGQTG 411
Score = 83 (34.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 33/82 (40%), Positives = 36/82 (43%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPG--AYPGQ-TPQYNMSQPPY 354
P + G G Q GY ++P G G QPGYG QPG A G P Y SQP
Sbjct: 557 PGIGGQTGAGQPGYGSQP----GIGGQTGAGQPGYG-TQPGVGAQTGTGQPGYG-SQPGV 610
Query: 355 G--------GYPSQPTPGGYPG 368
G GY SQP GG G
Sbjct: 611 GTQIGAGQPGYGSQPGIGGQTG 632
Score = 83 (34.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 33/82 (40%), Positives = 36/82 (43%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPG--AYPGQ-TPQYNMSQPPY 354
P + G G Q GY ++P G G QPGYG QPG A G P Y SQP
Sbjct: 506 PGIGGQTGAGQPGYGSQP----GIGGQTGAGQPGYG-TQPGIGAQTGAGQPGYG-SQPGI 559
Query: 355 GG--------YPSQPTPGGYPG 368
GG Y SQP GG G
Sbjct: 560 GGQTGAGQPGYGSQPGIGGQTG 581
Score = 82 (33.9 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 28/64 (43%), Positives = 30/64 (46%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPG 364
G Q GY ++P G G QPGYG QPG GQT QP YG SQP G
Sbjct: 207 GAGQPGYGSQP----GIGGQTGAGQPGYGS-QPGI-GGQT---GAGQPGYG---SQPGIG 254
Query: 365 GYPG 368
G G
Sbjct: 255 GQTG 258
Score = 82 (33.9 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 29/71 (40%), Positives = 33/71 (46%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P + G G Q GY ++P G G QPGYG QPG GQT QP YG
Sbjct: 302 PGIGGQTGAGQPGYGSQP----GIGGQTGAGQPGYGS-QPGI-GGQT---GAGQPGYG-- 350
Query: 358 PSQPTPGGYPG 368
+QP GG G
Sbjct: 351 -TQPGIGGQTG 360
Score = 81 (33.6 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 29/74 (39%), Positives = 33/74 (44%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG-- 355
P + G G Q GY ++ G G QPGYG QPG GQT QP YG
Sbjct: 1000 PGIGGQTGAGQPGYGSQT----GVGGQIGAGQPGYGS-QPGI-GGQT---GAGQPGYGAQ 1050
Query: 356 -GYPSQPTPGGYPG 368
G+ QP G PG
Sbjct: 1051 PGFGGQPGYGNQPG 1064
Score = 80 (33.2 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 32/81 (39%), Positives = 35/81 (43%)
Query: 300 PAMAG--GYSQQGYQARP----PTSWGTPGAPSMQQPGYGYV----QPG--AYPGQTPQY 347
P + G G Q GY +P T G PG S QPG G QPG + PG Q
Sbjct: 574 PGIGGQTGAGQPGYGTQPGVGAQTGTGQPGYGS--QPGVGTQIGAGQPGYGSQPGIGGQT 631
Query: 348 NMSQPPYGGYPSQPTPGGYPG 368
QP YG SQP GG G
Sbjct: 632 GAGQPGYG---SQPGIGGQTG 649
Score = 79 (32.9 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 27/66 (40%), Positives = 30/66 (45%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPS--QPT 362
G Q GY ++P G G QPGYG QPG GQT +QP YG P T
Sbjct: 615 GAGQPGYGSQP----GIGGQTGAGQPGYGS-QPGI-GGQT---GAAQPGYGTQPGVGAQT 665
Query: 363 PGGYPG 368
G PG
Sbjct: 666 GTGQPG 671
Score = 79 (32.9 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 32/81 (39%), Positives = 35/81 (43%)
Query: 300 PAMAG--GYSQQGYQARP----PTSWGTPGAPSMQQPGYGYV----QPG--AYPGQTPQY 347
P + G G Q GY +P T G PG S QPG G QPG + PG Q
Sbjct: 455 PGIGGQTGAGQPGYGTQPGIGVQTGAGQPGYGS--QPGIGAQTGAGQPGYGSQPGIGGQT 512
Query: 348 NMSQPPYGGYPSQPTPGGYPG 368
QP YG SQP GG G
Sbjct: 513 GAGQPGYG---SQPGIGGQTG 530
Score = 79 (32.9 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 32/83 (38%), Positives = 37/83 (44%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQT----PQYNMSQPP 353
P + G G Q GY ++P G G QPGYG QPG GQT P Y +QP
Sbjct: 387 PGIGGQTGPGQPGYGSQP----GIGGQTGAGQPGYG-TQPGI-GGQTGAGQPGYG-TQPG 439
Query: 354 YG--------GYPSQPTPGGYPG 368
G GY +QP GG G
Sbjct: 440 IGAQTGAGQPGYGTQPGIGGQTG 462
Score = 78 (32.5 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 28/75 (37%), Positives = 35/75 (46%)
Query: 302 MAGGYSQQ---GYQARP----PTSWGT-PGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP 353
+ GG S+ GY A+P P+ +G+ PG Q G G G PG + Q QP
Sbjct: 835 VGGGQSEAAKPGYWAQPGIGGPSRYGSQPGIGD--QTGAGQSGYGGQPGISGQTGGGQPG 892
Query: 354 YGGYPSQPTPGGYPG 368
YGG Q T G PG
Sbjct: 893 YGG---QATISGLPG 904
Score = 78 (32.5 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 28/79 (35%), Positives = 32/79 (40%)
Query: 300 PAMAG--GYSQQGYQARP----PTSWGTPGAPSM--QQPGYGYVQPGAYPGQTPQYNMSQ 351
P + G G Q GY ++P T G PG S Q G G G+ PG Q Q
Sbjct: 727 PGIGGQSGAGQPGYGSQPGIGGQTGGGQPGYGSQIGGQTGAGQPSYGSQPGVGAQNGGGQ 786
Query: 352 PPYGGYP--SQPTPGGYPG 368
P YG P T G PG
Sbjct: 787 PGYGTRPVIGGQTGAGQPG 805
Score = 77 (32.2 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 26/63 (41%), Positives = 27/63 (42%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPG 364
G Q GY A+P G G QPGYG QPG GQT QP YG T
Sbjct: 717 GTGQPGYGAQP----GIGGQSGAGQPGYGS-QPGI-GGQT---GGGQPGYGSQIGGQTGA 767
Query: 365 GYP 367
G P
Sbjct: 768 GQP 770
Score = 77 (32.2 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 28/71 (39%), Positives = 31/71 (43%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P + G G +Q GY +P G QPGYG QPG GQT QP YG
Sbjct: 642 PGIGGQTGAAQPGYGTQP----GVGAQTGTGQPGYG-AQPGI-GGQT---GAGQPGYG-- 690
Query: 358 PSQPTPGGYPG 368
QP GG G
Sbjct: 691 -RQPGIGGQTG 700
Score = 77 (32.2 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 33/76 (43%), Positives = 35/76 (46%)
Query: 305 GYSQQGYQARP----PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG----- 355
G Q GY +P T G PG + QPG G VQ GA GQ P Y SQP G
Sbjct: 445 GAGQPGYGTQPGIGGQTGAGQPGYGT--QPGIG-VQTGA--GQ-PGYG-SQPGIGAQTGA 497
Query: 356 ---GYPSQPTPGGYPG 368
GY SQP GG G
Sbjct: 498 GQPGYGSQPGIGGQTG 513
Score = 77 (32.2 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 30/73 (41%), Positives = 32/73 (43%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P + G G Q GY +P T GA QPGYG QPG GQT QP YG
Sbjct: 421 PGIGGQTGAGQPGYGTQPGIGAQT-GAG---QPGYG-TQPGI-GGQT---GAGQPGYGTQ 471
Query: 358 PS--QPTPGGYPG 368
P T G PG
Sbjct: 472 PGIGVQTGAGQPG 484
Score = 77 (32.2 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 30/76 (39%), Positives = 32/76 (42%)
Query: 301 AMAGGYSQQGYQARP----PTSWGTPGAPSMQ----QPGYGYVQPGAYPGQTPQYNMSQP 352
A AG Q GY A+P T G PG S Q G G G+ PG Q QP
Sbjct: 170 AQAGA-GQPGYGAQPGVGAQTGAGQPGYGSQTGIGGQTGAGQPGYGSQPGIGGQTGAGQP 228
Query: 353 PYGGYPSQPTPGGYPG 368
YG SQP GG G
Sbjct: 229 GYG---SQPGIGGQTG 241
Score = 77 (32.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 30/78 (38%), Positives = 32/78 (41%)
Query: 297 IRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQT----PQYNMSQP 352
I P + G G Q T G G + QPGYG QPG GQT P Y SQ
Sbjct: 961 IGQPGIGGQTGTSGRQPGYGTQPGIGGQTAAGQPGYGS-QPGI-GGQTGAGQPGYG-SQT 1017
Query: 353 PYGGY--PSQPTPGGYPG 368
GG QP G PG
Sbjct: 1018 GVGGQIGAGQPGYGSQPG 1035
Score = 75 (31.5 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 31/82 (37%), Positives = 39/82 (47%)
Query: 300 PAMAG--GYSQQGYQARPPTS----WGT-PGAPSMQQ-PG--YGY-VQPGAYPGQTPQYN 348
P ++G G Q GY + S +GT PG ++ PG YGY QPG GQT
Sbjct: 880 PGISGQTGGGQPGYGGQATISGLPGYGTQPGIGALTAVPGGHYGYETQPGI-GGQT---G 935
Query: 349 MSQPPYGGYPS--QPTPGGYPG 368
+QP +GG P T G PG
Sbjct: 936 TNQPGFGGQPGIGGQTGAGQPG 957
Score = 72 (30.4 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 29/78 (37%), Positives = 32/78 (41%)
Query: 300 PAMAG--GYSQQGYQARPPTSWGTPGAPSM-QQPGYGYVQPGAYPGQ--TP----QYNMS 350
P + G G Q GY ++ G G PS QPG G G PG P Q
Sbjct: 744 PGIGGQTGGGQPGYGSQIGGQTGA-GQPSYGSQPGVGAQNGGGQPGYGTRPVIGGQTGAG 802
Query: 351 QPPYGGYPSQPTPGGYPG 368
QP YGG Q GG PG
Sbjct: 803 QPGYGG---QTGVGGSPG 817
Score = 69 (29.3 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 23/66 (34%), Positives = 27/66 (40%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPS--QPT 362
G Q GY ++P G G + QPGYG + G Q QP YG P T
Sbjct: 139 GAGQPGYGSQP----GIGGQTATGQPGYG-----SQLGVGAQAGAGQPGYGAQPGVGAQT 189
Query: 363 PGGYPG 368
G PG
Sbjct: 190 GAGQPG 195
Score = 62 (26.9 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 28/79 (35%), Positives = 33/79 (41%)
Query: 293 SENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQP 352
S RI + + +GG + P G G QPGYG QPG GQT QP
Sbjct: 108 SSGRILDASGSGGIGRPDSIISLPG--GVGGQTGAGQPGYGS-QPGI-GGQTAT---GQP 160
Query: 353 PYG---GYPSQPTPGGYPG 368
YG G +Q G PG
Sbjct: 161 GYGSQLGVGAQ-AGAGQPG 178
>UNIPROTKB|G8ENL4 [details] [associations]
symbol:FUS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 EMBL:CU464163 EMBL:JF940526
Ensembl:ENSSSCT00000036326 Uniprot:G8ENL4
Length = 517
Score = 234 (87.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 71/182 (39%), Positives = 88/182 (48%)
Query: 412 SYSQPPASGYNQQG-QGYAQDSYGGY--HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
+Y P GY+QQ Q Y Q SY GY A SGYGQ++ Y G GYG +
Sbjct: 16 AYPTQPGQGYSQQSNQPYGQQSYSGYGQSADTSGYGQSS-YGSSYGQTQNTGYGAQSAPQ 74
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS-YGVPP 527
G T YG+ G +Q+ QSS GYG QQP+P++ S ++Q S YG P
Sbjct: 75 GYGSTGGYGS-GQGSQSSYGQQSS----YPGYG--QQPAPSSTSGSYGTSSQSSGYGQPQ 127
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQAQKPLANPP-AYGQTQQ-SPGSAGGYGQPGYSHSQPP 585
+ GYG Q SGY G Q+ NPP YGQ Q + S GG G G S+ Q
Sbjct: 128 SG--GYGQQ----SGYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGSYGQDQ 181
Query: 586 PS 587
PS
Sbjct: 182 PS 183
Score = 159 (61.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 62/174 (35%), Positives = 67/174 (38%)
Query: 410 GYSYSQPPASGYNQQG--QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNT 467
G SY Q +GY Q QGY S GGY SG G + Y QQ Y GYG
Sbjct: 56 GSSYGQTQNTGYGAQSAPQGYG--STGGYG---SGQGSQSSYGQQSSY---PGYGQ--QP 105
Query: 468 SQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQ-GYGTGQQPSPNTASY-PPQG-ATQPSYG 524
+ + SYG S+ P S GQQ GYG QQ SY PPQG Q Y
Sbjct: 106 APSSTSGSYGTSSQSSGYGQP--QSGGYGQQSGYGGQQQSYGQQQSYNPPQGYGQQNQYN 163
Query: 525 VPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
S SG G G YG Q YG QS G GG G
Sbjct: 164 ----SSSGGGGG----GGGGSYGQDQPSMSGGGGGGYGNQDQSGGYGGGQQDRG 209
Score = 147 (56.8 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 56/150 (37%), Positives = 70/150 (46%)
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGY-GTGQQPSPNTASYPPQGATQPSY 523
N+ +Q+ T SYGA QS+ GQQ Y G GQ S +T+ Y Q + SY
Sbjct: 4 NDYTQQA-TQSYGAYPTQPGQGYSQQSNQPYGQQSYSGYGQ--SADTSGYG-QSSYGSSY 59
Query: 524 GVPPTSQSGYGSQVPPQSGYA---GYGMPQAQKPL----ANPPAYGQTQQSPGS-AGGYG 575
G T +GYG+Q PQ GY GYG Q + ++ P YGQ Q +P S +G YG
Sbjct: 60 G--QTQNTGYGAQSAPQ-GYGSTGGYGSGQGSQSSYGQQSSYPGYGQ-QPAPSSTSGSYG 115
Query: 576 QPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
S S Y QP SG S YG
Sbjct: 116 TSSQS------SGYGQPQSGGY-GQQSGYG 138
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 58/191 (30%), Positives = 69/191 (36%)
Query: 410 GYSYSQPPAS-----GYNQQGQGYAQDSYGGYHAPQSGYG-QAAPYDQQQGYNSAAGYGN 463
GY P+S G + Q GY Q GGY QSGYG Q Y QQQ YN GYG
Sbjct: 100 GYGQQPAPSSTSGSYGTSSQSSGYGQPQSGGY-GQQSGYGGQQQSYGQQQSYNPPQGYGQ 158
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY 523
N + G G Q P S + G GYG Q + Y G Q
Sbjct: 159 QNQYNSSSGGGGGGGGGSYGQDQP---SMSGGGGGGYGNQDQ----SGGYG--GGQQDRG 209
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
G SG G SG GY P G + G GG + G++
Sbjct: 210 GRGRGGGSGGGGGYNRSSG--GY----------EPRGRGGGRGGRGGMGGSDRGGFNKFG 257
Query: 584 PPPSSYAQPDS 594
P ++ DS
Sbjct: 258 GPRDQGSRHDS 268
>ZFIN|ZDB-GENE-030131-1600 [details] [associations]
symbol:ewsr1b "Ewing sarcoma breakpoint region 1b"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IMP] [GO:0007067 "mitosis"
evidence=IMP] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
ZFIN:ZDB-GENE-030131-1600 GO:GO:0007067 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0021954
GeneTree:ENSGT00530000063105 HOGENOM:HOG000038010
HOVERGEN:HBG000970 EMBL:BX664747 EMBL:BC097019 UniGene:Dr.76923
SMR:Q4QRG0 STRING:Q4QRG0 Ensembl:ENSDART00000003998 OMA:PVINIYL
Uniprot:Q4QRG0
Length = 579
Score = 234 (87.4 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 86/223 (38%), Positives = 98/223 (43%)
Query: 412 SYSQPPASGYNQQGQ-GYAQDSYGGYH----APQSGYGQAAP----YDQQQGYNSAAGYG 462
SY+ PPA Y Q Q GY Q Y Y AP++ Y QAAP Y QQQ Y S G
Sbjct: 21 SYTAPPAQTYGQTAQQGYTQQDYSSYAQPAAAPEATYSQAAPSAGAYAQQQ-YGSTYGQA 79
Query: 463 NVN--------NTSQEG-HT-P--SYGAQG-DSTQAPPPVQSSAAMGQQGYGTGQQPSPN 509
T Q G +T P SYGA + A P Q+S Q GY T QP+ +
Sbjct: 80 AATAAAAPAAYGTPQPGAYTQPAQSYGASSYTGSTAAPAAQASYG-SQPGYST--QPAYS 136
Query: 510 TASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPG 569
S P + SY +SQ Y Q AGY P Q A P YGQ QQS
Sbjct: 137 GYSQQPAASAPQSYSA--SSQPAYNQSAYSQP--AGYSQPGYQ---AQQPGYGQQQQS-- 187
Query: 570 SAGGYGQPGYSHSQPPP--------SSYAQPDSGSQRAPPSNY 604
A G GQP H Q PP SSYAQ G Q AP ++Y
Sbjct: 188 -AYGQGQPPQQHQQGPPAAYPPQGSSSYAQTQYGQQSAPQNDY 229
Score = 208 (78.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 73/207 (35%), Positives = 88/207 (42%)
Query: 419 SGYNQQGQGYAQDSYGGYHAPQSG-YGQAAPYDQ-QQGYNSAAGYGNVNNTSQEGHTPSY 476
S YNQ G AQ SYG Y AP + YGQ A QQ Y+S A + PS
Sbjct: 8 SSYNQAG---AQQSYGSYTAPPAQTYGQTAQQGYTQQDYSSYAQPAAAPEATYSQAAPSA 64
Query: 477 GAQGDSTQAPPPVQSSA--AMGQQGYGTGQQPSPNTASYPPQGATQPSY-G--VPPTSQS 531
GA Q++A A YGT P P + P Q SY G P +Q+
Sbjct: 65 GAYAQQQYGSTYGQAAATAAAAPAAYGT---PQPGAYTQPAQSYGASSYTGSTAAPAAQA 121
Query: 532 GYGSQ--VPPQSGYAGYGM-PQAQKP----LANPPAYGQTQQSPGSAGGYGQPGYSHSQP 584
YGSQ Q Y+GY P A P ++ PAY Q+ S GY QPGY QP
Sbjct: 122 SYGSQPGYSTQPAYSGYSQQPAASAPQSYSASSQPAYNQSAYS--QPAGYSQPGYQAQQP 179
Query: 585 -----PPSSYAQ--PDSGSQRAPPSNY 604
S+Y Q P Q+ PP+ Y
Sbjct: 180 GYGQQQQSAYGQGQPPQQHQQGPPAAY 206
Score = 190 (71.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 69/193 (35%), Positives = 84/193 (43%)
Query: 411 YSYSQPPASGYNQQ--GQGYAQDSYGGYHAPQSGYGQAAP--YDQQ-QGYNSAAGYGNVN 465
YS + P A Y QQ G Y Q + AP + YG P Y Q Q Y A+ Y
Sbjct: 57 YSQAAPSAGAYAQQQYGSTYGQAAATAAAAP-AAYGTPQPGAYTQPAQSYG-ASSY--TG 112
Query: 466 NTSQEGHTPSYGAQ-GDSTQAPPP--VQSSAAMGQQGYGTGQQPSPNTASYP-PQGATQP 521
+T+ SYG+Q G STQ Q AA Q Y QP+ N ++Y P G +QP
Sbjct: 113 STAAPAAQASYGSQPGYSTQPAYSGYSQQPAASAPQSYSASSQPAYNQSAYSQPAGYSQP 172
Query: 522 SYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ---PG 578
Y Q GYG Q QS Y G G P Q P AY S + YGQ P
Sbjct: 173 GY---QAQQPGYGQQ--QQSAY-GQGQPPQQHQQGPPAAYPPQGSSSYAQTQYGQQSAPQ 226
Query: 579 YSHSQPPPSSYAQ 591
+ Q P +SY+Q
Sbjct: 227 NDYQQNPYNSYSQ 239
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 77/278 (27%), Positives = 98/278 (35%)
Query: 329 QPGYG-YVQPGAYP-GQTPQYNMSQPPYGGYPSQPTPGGYPGNWDXXXXXXXXXXXXXXX 386
Q YG Y P A GQT Q +Q Y Y +QP P
Sbjct: 16 QQSYGSYTAPPAQTYGQTAQQGYTQQDYSSY-AQPAAA--P-------EATYSQAAPSAG 65
Query: 387 XXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQQGQGYAQDSY-GGYHAP--QSGY 443
Y QP A Y Q Q Y SY G AP Q+ Y
Sbjct: 66 AYAQQQYGSTYGQAAATAAAAPAAYGTPQPGA--YTQPAQSYGASSYTGSTAAPAAQASY 123
Query: 444 GQAAPYDQQQGYN------SAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQ 497
G Y Q Y+ +A+ + + +SQ + S +Q P GQ
Sbjct: 124 GSQPGYSTQPAYSGYSQQPAASAPQSYSASSQPAYNQSAYSQPAGYSQPGYQAQQPGYGQ 183
Query: 498 Q---GYGTGQQPSPNT----ASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQ 550
Q YG GQ P + A+YPPQG++ SY +Q+ YG Q PQ+ Y
Sbjct: 184 QQQSAYGQGQPPQQHQQGPPAAYPPQGSS--SY-----AQTQYGQQSAPQNDYQ------ 230
Query: 551 AQKPLANPPAYGQTQQSPGSA-GGY---GQPGYSHSQP 584
Q P + G + PGS GGY G+ GY P
Sbjct: 231 -QNPYNSYSQGGVSGGYPGSQRGGYQDGGRDGYDRGGP 267
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 56/171 (32%), Positives = 67/171 (39%)
Query: 441 SGYGQAAPYDQQQGYNS--AAGYGNVNNTSQEGHTPS-YGAQGDSTQAPPPVQSSAAMGQ 497
S Y QA Y + A YG T+Q+G+T Y + AP S AA
Sbjct: 8 SSYNQAGAQQSYGSYTAPPAQTYGQ---TAQQGYTQQDYSSYAQPAAAPEATYSQAAPSA 64
Query: 498 QGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLAN 557
Y Q S + A +YG P Q G +Q P QS YG A
Sbjct: 65 GAYAQQQYGSTYGQAAATAAAAPAAYGTP---QPGAYTQ-PAQS----YGASSYTGSTAA 116
Query: 558 PPAYGQTQQSPGSAGGYG-QPGYS-HSQPPPSSYAQPDSGSQRAPPSNYGA 606
P A Q S GS GY QP YS +SQ P +S Q S S + P N A
Sbjct: 117 PAA----QASYGSQPGYSTQPAYSGYSQQPAASAPQSYSASSQ-PAYNQSA 162
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 51/163 (31%), Positives = 69/163 (42%)
Query: 459 AGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSP--NTASYPPQ 516
A N ++ +Q G SYG+ PP Q+ QQGY T Q S A+ P
Sbjct: 2 ASVTNYSSYNQAGAQQSYGSY-----TAPPAQTYGQTAQQGY-TQQDYSSYAQPAAAPEA 55
Query: 517 GATQ--PSYGVPPTSQSG--YGSQVPPQSGY-AGYGMPQAQKPLANPPAYGQTQQS---- 567
+Q PS G Q G YG + A YG PQ +YG + +
Sbjct: 56 TYSQAAPSAGAYAQQQYGSTYGQAAATAAAAPAAYGTPQPGAYTQPAQSYGASSYTGSTA 115
Query: 568 -PGSAGGYG-QPGYSHSQPPPSSYAQPDSGSQRAPPSNYGAAT 608
P + YG QPGYS +QP S Y+Q + S P +Y A++
Sbjct: 116 APAAQASYGSQPGYS-TQPAYSGYSQQPAASA---PQSYSASS 154
Score = 99 (39.9 bits), Expect = 6.0e-07, Sum P(3) = 6.0e-07
Identities = 24/56 (42%), Positives = 28/56 (50%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAY-PGQTPQYNMSQPPYGGYPSQ 360
Y+Q Y P + PG + QQPGYG Q AY GQ PQ + PP YP Q
Sbjct: 158 YNQSAYSQ--PAGYSQPGYQA-QQPGYGQQQQSAYGQGQPPQQHQQGPP-AAYPPQ 209
Score = 97 (39.2 bits), Expect = 6.0e-07, Sum P(3) = 6.0e-07
Identities = 36/121 (29%), Positives = 44/121 (36%)
Query: 413 YSQPPASGYNQQGQG-YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEG 471
+ Q P + Y QG YAQ YG APQ+ Y Q PY+ + GY SQ G
Sbjct: 198 HQQGPPAAYPPQGSSSYAQTQYGQQSAPQNDY-QQNPYNSYSQGGVSGGYPG----SQRG 252
Query: 472 HTPSYGAQGDSTQAPPPVQSSAAMGQQGYG-TGQQPSPNTASYPPQGATQPSYGVPPTSQ 530
G G P MG+ G G G + N P +G G P
Sbjct: 253 GYQDGGRDGYDRGGP----RGRGMGRGGMGIAGDRGGFNKPGGPMRGGMDRDMGHPGEQD 308
Query: 531 S 531
S
Sbjct: 309 S 309
Score = 92 (37.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 30/74 (40%), Positives = 33/74 (44%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGY----GYVQPGAYPGQTPQYNMSQPP-Y 354
PA +G YSQQ A P S+ P+ Q Y GY QPG Y Q P Y Q Y
Sbjct: 133 PAYSG-YSQQP-AASAPQSYSASSQPAYNQSAYSQPAGYSQPG-YQAQQPGYGQQQQSAY 189
Query: 355 G-GYPSQPTPGGYP 367
G G P Q G P
Sbjct: 190 GQGQPPQQHQQGPP 203
Score = 80 (33.2 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 35/118 (29%), Positives = 46/118 (38%)
Query: 262 PPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGY---------- 311
PP T + T Q T + S Q + P+ AG Y+QQ Y
Sbjct: 25 PPAQTYGQ-TAQQGYTQQDYSSYAQPAAAPEATYSQAAPS-AGAYAQQQYGSTYGQAAAT 82
Query: 312 QARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG---GYPSQPTPGGY 366
A P ++GTP + QP Y +Y G T +Q YG GY +QP GY
Sbjct: 83 AAAAPAAYGTPQPGAYTQPAQSY-GASSYTGSTAA-PAAQASYGSQPGYSTQPAYSGY 138
Score = 42 (19.8 bits), Expect = 6.0e-07, Sum P(3) = 6.0e-07
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 33 TGFSAPDPAVAPTSYNSVPPPA 54
+G+S A AP SY++ PA
Sbjct: 136 SGYSQQPAASAPQSYSASSQPA 157
Score = 40 (19.1 bits), Expect = 9.5e-07, Sum P(3) = 9.5e-07
Identities = 30/125 (24%), Positives = 45/125 (36%)
Query: 3 DEPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFS----APDPAVAPTSYNSVPPPADEFQ 58
D Y+ + Y A A++ G + A A AP +Y + P P
Sbjct: 42 DYSSYAQPAAAPEATYSQAAPSAGAYAQQQYGSTYGQAAATAAAAPAAYGT-PQPG---- 96
Query: 59 DFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPP--SDLKSIPAPSA 116
A + A+ A +S + P + G + G+S+ P S PA SA
Sbjct: 97 ---AYTQPAQSYGA---SSYTGSTAAPAAQASYG----SQPGYSTQPAYSGYSQQPAASA 146
Query: 117 IPVSY 121
P SY
Sbjct: 147 -PQSY 150
>ZFIN|ZDB-GENE-030131-2317 [details] [associations]
symbol:ewsr1a "Ewing sarcoma breakpoint region 1a"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0007067 "mitosis" evidence=IMP]
[GO:0021954 "central nervous system neuron development"
evidence=IMP] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
ZFIN:ZDB-GENE-030131-2317 GO:GO:0007067 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0021954
eggNOG:NOG240581 HOGENOM:HOG000038010 HOVERGEN:HBG000970 KO:K13209
OrthoDB:EOG42NJ15 EMBL:BC068397 IPI:IPI00488733
RefSeq:NP_001108610.1 UniGene:Dr.5648 ProteinModelPortal:Q6NUX1
PRIDE:Q6NUX1 GeneID:323597 KEGG:dre:323597 CTD:323597
NextBio:20808342 ArrayExpress:Q6NUX1 Bgee:Q6NUX1 Uniprot:Q6NUX1
Length = 624
Score = 233 (87.1 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 76/205 (37%), Positives = 92/205 (44%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-P-QSGYGQAAP--YDQQQGYNSAAGYGNVNNTSQEGHT 473
A+ YN GQ +Q YG Y A P Q GYGQ Y QQQGY S + + + G +
Sbjct: 2 AADYNSYGQAGSQQGYGSYPAQPSQPGYGQGTQQSYGQQQGYGSYSQPADSTYSQTSGSS 61
Query: 474 PSYGAQ--GDSTQAPPPVQSS----AAMGQ------QGYGTGQQPSPNTASYPPQGATQP 521
SYG Q G S PP S +A Q QGYG+ S +TA+ TQ
Sbjct: 62 SSYGQQPYGSSYGQQPPASGSYNAASATPQGYTQPVQGYGSSSYDS-STAAASSTSNTQT 120
Query: 522 SYGVPPTSQSGYGSQVPPQSGYAGYGM-PQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS 580
SYG Q+ YG+Q S Y GYG P A P P +Y Q P GY Q YS
Sbjct: 121 SYG----GQASYGTQ----SAYPGYGQQPAAAAP---PSSYSSGSQQPA---GYEQSSYS 166
Query: 581 HSQPPPSSYAQPDSGSQRAPPSNYG 605
QP S+Y+Q G + YG
Sbjct: 167 Q-QPQQSTYSQQQQGGYQGQQGGYG 190
Score = 208 (78.3 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 86/278 (30%), Positives = 100/278 (35%)
Query: 350 SQPPYGGYPSQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 409
SQ YG YP+QP+ GY G
Sbjct: 13 SQQGYGSYPAQPSQPGY-GQGTQQSYGQQQGYGSYSQPADSTYSQTSGSSSSYGQQPYGS 71
Query: 410 GYSYSQPPASG-YNQQG---QGYAQ--DSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGN 463
Y QPPASG YN QGY Q YG S ++ + Q Y A YG
Sbjct: 72 SYG-QQPPASGSYNAASATPQGYTQPVQGYGSSSYDSSTAAASSTSNTQTSYGGQASYG- 129
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGY---GTGQQPSPNTASYPPQGA-- 518
+Q + P YG Q + APP SS + GY QQP +T S QG
Sbjct: 130 ----TQSAY-PGYGQQ-PAAAAPPSSYSSGSQQPAGYEQSSYSQQPQQSTYSQQQQGGYQ 183
Query: 519 -TQPSYGVPPT-SQSGYGSQVPPQSGYA---GYGMPQAQKPLANPPAYGQTQQSPGSAGG 573
Q YG + SQ G Q PPQ A Y P + YGQ Q S G GG
Sbjct: 184 GQQGGYGQQSSYSQQGGYQQTPPQQQQAPPSSYAPPSGSYGQPSASQYGQ-QGSTG--GG 240
Query: 574 YGQPGYSHSQPPPSSYA--QPD---SGSQRAPPSN-YG 605
YGQ Y PP+ Y +PD G P S YG
Sbjct: 241 YGQSDYK----PPNQYGSYRPDHQNGGGYSGPESGGYG 274
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 78/309 (25%), Positives = 101/309 (32%)
Query: 308 QQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP----QYNMSQPPYGGYPSQPTP 363
QQGY + + T S YG G+ GQ P YN + GY +QP
Sbjct: 40 QQGYGSYSQPADSTYSQTSGSSSSYGQQPYGSSYGQQPPASGSYNAASATPQGY-TQPVQ 98
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXGYSY-SQPPA 418
G ++D YS SQ PA
Sbjct: 99 GYGSSSYDSSTAAASSTSNTQTSYGGQASYGTQSAYPGYGQQPAAAAPPSSYSSGSQQPA 158
Query: 419 ----SGYNQQGQG--YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGH 472
S Y+QQ Q Y+Q GGY Q GYGQ + Y QQ GY +
Sbjct: 159 GYEQSSYSQQPQQSTYSQQQQGGYQGQQGGYGQQSSYSQQGGYQQTPP--QQQQAPPSSY 216
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNT-ASYPPQGATQPSYGVPPTSQS 531
P G+ G + + Q S G GYG PN SY P Y P +
Sbjct: 217 APPSGSYGQPSASQYGQQGSTG-G--GYGQSDYKPPNQYGSYRPDHQNGGGYSGPESG-- 271
Query: 532 GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQ 591
GYG P G G G + + G + G GG + G + +++
Sbjct: 272 GYGG---PGEG-RGMGGGENRGRGRGGFDRGMMRGGGGMRGGMSRGGMGIAGDR-GGFSK 326
Query: 592 PDSGSQRAP 600
P G AP
Sbjct: 327 PGDGEMGAP 335
Score = 157 (60.3 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 86/294 (29%), Positives = 104/294 (35%)
Query: 303 AGGYSQQGYQARPPTSWGT-PGAPSMQQPGYGYVQPGAYPGQTPQY-NMSQPPYGGYPSQ 360
A Y+ G QA +G+ P PS QPGYG +Y GQ Y + SQP Y SQ
Sbjct: 2 AADYNSYG-QAGSQQGYGSYPAQPS--QPGYGQGTQQSY-GQQQGYGSYSQPADSTY-SQ 56
Query: 361 PTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASG 420
+ G ++ Y S AS
Sbjct: 57 TS--GSSSSYGQQPYGSSYGQQPPASGSYNAASATPQGYTQPVQGYGSSSYDSSTAAASS 114
Query: 421 YNQQGQGYA-QDSYGGYHAPQSGYGQ-----AAPYDQQQGYNSAAGYGNVNNTSQEGHTP 474
+ Y Q SYG A GYGQ A P G AGY ++ SQ+
Sbjct: 115 TSNTQTSYGGQASYGTQSA-YPGYGQQPAAAAPPSSYSSGSQQPAGYEQ-SSYSQQPQQS 172
Query: 475 SYGAQ---GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS--YGVPPTS 529
+Y Q G Q Q S+ Q GY QQ P PP PS YG P S
Sbjct: 173 TYSQQQQGGYQGQQGGYGQQSSYSQQGGY---QQTPPQQQQAPPSSYAPPSGSYGQPSAS 229
Query: 530 QSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGS-----AGGYGQPG 578
Q YG Q +G GYG KP +Y Q+ G +GGYG PG
Sbjct: 230 Q--YGQQ--GSTG-GGYGQSD-YKPPNQYGSYRPDHQNGGGYSGPESGGYGGPG 277
>UNIPROTKB|Q28009 [details] [associations]
symbol:FUS "RNA-binding protein FUS" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0045944 GO:GO:0003723
eggNOG:NOG240581 GeneTree:ENSGT00530000063105 KO:K13098
HOGENOM:HOG000038010 CTD:2521 EMBL:U26024 EMBL:BC119965
IPI:IPI00705463 RefSeq:NP_776337.1 UniGene:Bt.2474
ProteinModelPortal:Q28009 STRING:Q28009 PRIDE:Q28009
Ensembl:ENSBTAT00000007571 GeneID:280796 KEGG:bta:280796
InParanoid:Q28009 OrthoDB:EOG4DV5NH NextBio:20804952 Uniprot:Q28009
Length = 513
Score = 229 (85.7 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 72/183 (39%), Positives = 88/183 (48%)
Query: 412 SYSQPPASGYNQQG-QGYAQDSYGGY--HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
+Y P GY+QQ Q Y Q SYGGY SGYGQ++ Y G GY ++
Sbjct: 16 AYPTQPGQGYSQQSNQPYGQQSYGGYGQSTDTSGYGQSS-YSGSYGQTQNTGYST--QSA 72
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG-Y-GTGQQPSPNTASYPPQGATQPS-YGV 525
+G++ S G G S + QSS GQQ Y G GQQP+P+ S ++Q S YG
Sbjct: 73 PQGYS-SAGGYGSSQSS----QSS--YGQQSSYPGYGQQPAPSGTSGSYGSSSQSSGYGQ 125
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPP-AYGQTQQSPGSAGGYGQPGYSHSQP 584
P GYG Q SGY G Q+ NPP YGQ Q S GG G G S+ Q
Sbjct: 126 P--QGGGYGQQ----SGYGGQQQSYGQQQSYNPPQGYGQQSQYNSSGGGGGGGGGSYGQD 179
Query: 585 PPS 587
PS
Sbjct: 180 QPS 182
Score = 176 (67.0 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 63/179 (35%), Positives = 78/179 (43%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTS---QEGHT 473
++ Y QQ A SYG Y P GY Q + +Q G S GYG +TS Q ++
Sbjct: 3 SNDYTQQ----ATQSYGAYPTQPGQGYSQQS--NQPYGQQSYGGYGQSTDTSGYGQSSYS 56
Query: 474 PSYGAQ---GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQ 530
SYG G STQ+ P SSA GYG+ Q + +SY Q ++ P YG P +
Sbjct: 57 GSYGQTQNTGYSTQSAPQGYSSAG----GYGSSQS---SQSSYGQQ-SSYPGYGQQP-AP 107
Query: 531 SGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP-GYSHSQPPPSS 588
SG S +GYG PQ YG QQS G Y P GY SS
Sbjct: 108 SGTSGSYGSSSQSSGYGQPQGGG-YGQQSGYGGQQQSYGQQQSYNPPQGYGQQSQYNSS 165
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 67/183 (36%), Positives = 78/183 (42%)
Query: 412 SYSQPPASGYNQQG--QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
SY Q +GY+ Q QGY+ S GGY + QS Q++ Y QQ Y GYG +
Sbjct: 58 SYGQTQNTGYSTQSAPQGYS--SAGGYGSSQSS--QSS-YGQQSSY---PGYGQ--QPAP 107
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQ-GYGTGQQPSPNTASY-PPQGATQPS-YGVP 526
G + SYG+ S+ P GQQ GYG QQ SY PPQG Q S Y
Sbjct: 108 SGTSGSYGSSSQSSGYGQP--QGGGYGQQSGYGGQQQSYGQQQSYNPPQGYGQQSQYNSS 165
Query: 527 PTSQSG----YGSQVPPQS---GYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
G YG P S G GYG Q Q YG QQ G G G GY
Sbjct: 166 GGGGGGGGGSYGQDQPSMSSGGGGGGYGN-QDQSG-----GYGGGQQDRGGRGRGGGGGY 219
Query: 580 SHS 582
+ S
Sbjct: 220 NRS 222
Score = 157 (60.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 54/165 (32%), Positives = 66/165 (40%)
Query: 429 AQDSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPP 487
A SYG Y P GY Q + +Q G S GYG +TS G + G+ G +
Sbjct: 10 ATQSYGAYPTQPGQGYSQQS--NQPYGQQSYGGYGQSTDTSGYGQSSYSGSYGQTQNTGY 67
Query: 488 PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAG-Y 546
QS+ QGY + Y ++Q SYG +S GYG Q P SG +G Y
Sbjct: 68 STQSAP----QGYSSA-------GGYGSSQSSQSSYG-QQSSYPGYGQQ-PAPSGTSGSY 114
Query: 547 GMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQ 591
G P G QQS G G G S PP Y Q
Sbjct: 115 GSSSQSSGYGQPQGGGYGQQS-GYGGQQQSYGQQQSYNPPQGYGQ 158
Score = 157 (60.3 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 72/261 (27%), Positives = 88/261 (33%)
Query: 300 PAMAG-GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
P G GYSQQ Q S+G G S GYG +Y G Y +Q GY
Sbjct: 18 PTQPGQGYSQQSNQPYGQQSYGGYGQ-STDTSGYGQ---SSYSGS---YGQTQNT--GYS 68
Query: 359 SQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPA 418
+Q P GY Y QP
Sbjct: 69 TQSAPQGYSSAGGYGSSQSSQSSYGQQSSYPGYGQQPAPSGTSGSYGSSSQSSGYGQPQG 128
Query: 419 SGYNQQ-GQGYAQDSYG---GYHAPQSGYGQAAPYDQQQGYNSAAG--YGNVN-NTSQEG 471
GY QQ G G Q SYG Y+ PQ GYGQ + Y+ G G YG + S G
Sbjct: 129 GGYGQQSGYGGQQQSYGQQQSYNPPQ-GYGQQSQYNSSGGGGGGGGGSYGQDQPSMSSGG 187
Query: 472 HTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS 531
YG Q S Q G+ G G G S + Y P+G G +
Sbjct: 188 GGGGYGNQDQSGGYGGGQQDRGGRGRGG-GGGYNRS--SGGYEPRGR-----GGGRGGRG 239
Query: 532 GYGSQVPPQSGYAGYGMPQAQ 552
G G + G+ +G P+ Q
Sbjct: 240 GMGGS--DRGGFNKFGGPRDQ 258
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 53/148 (35%), Positives = 69/148 (46%)
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYG 524
N+ +Q+ T SYGA QS+ GQQ YG G S +T+ Y Q + SYG
Sbjct: 4 NDYTQQA-TQSYGAYPTQPGQGYSQQSNQPYGQQSYG-GYGQSTDTSGYG-QSSYSGSYG 60
Query: 525 VPPTSQSGYGSQVPPQSGYA---GYGMPQAQKPL----ANPPAYGQTQQSPGSAGGYGQP 577
T +GY +Q PQ GY+ GYG Q+ + ++ P YGQ G++G YG
Sbjct: 61 --QTQNTGYSTQSAPQ-GYSSAGGYGSSQSSQSSYGQQSSYPGYGQQPAPSGTSGSYG-- 115
Query: 578 GYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
S SQ S Y QP G S YG
Sbjct: 116 --SSSQS--SGYGQPQGGGY-GQQSGYG 138
Score = 38 (18.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 561 YGQTQQSPGSAGGYGQPGY 579
YG ++ G GGY + GY
Sbjct: 455 YGDDRR--GGRGGYDRGGY 471
>UNIPROTKB|C9JSZ1 [details] [associations]
symbol:FUBP1 "Far upstream element-binding protein 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
EMBL:AC096948 HGNC:HGNC:4004 ChiTaRS:FUBP1 IPI:IPI00641948
ProteinModelPortal:C9JSZ1 SMR:C9JSZ1 STRING:C9JSZ1 PRIDE:C9JSZ1
Ensembl:ENST00000421641 HOGENOM:HOG000110867 ArrayExpress:C9JSZ1
Bgee:C9JSZ1 Uniprot:C9JSZ1
Length = 232
Score = 204 (76.9 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 72/212 (33%), Positives = 105/212 (49%)
Query: 60 FQAAKRRAEQIAARLCNSVSAEA----------KRPRVENGSGGFDSAD-----KGFSSP 104
F+ A +RA QIAA++ KRP +E+G G + S +G SP
Sbjct: 31 FKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRP-LEDGDGSWTSPSSTTHWEGMPSP 89
Query: 105 ---PSDLKSIPAP------SAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQ 155
D K + AP + +P + +S+ T ++ ++P+ VG IIG+ GE I +Q
Sbjct: 90 FKDQPDAKKV-APQNDSFGTQLPPMHQQQRSVMT-EEYKVPDGMVGFIIGRGGEQISRIQ 147
Query: 156 LQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLT 215
+SG KIQ+ D+ P RS L GTPE + A++L+ D + E G
Sbjct: 148 QESGCKIQIAPDSGG---LPERSCMLTGTPESVQSAKRLL-DQIVEKGRPAPGFHHGDGP 203
Query: 216 GQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQ 247
G A + + IP +K GLVIGKGGETIK +Q
Sbjct: 204 GNAVQE---IMIPASKAGLVIGKGGETIKQLQ 232
Score = 148 (57.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 48/197 (24%), Positives = 88/197 (44%)
Query: 106 SDLKSIPAPSAIPVSYGGYQSMG----TSKKIEIPNIR--VGVIIGKSGETIKYLQLQSG 159
+D ++P PS+ GG G + K + R I G +G ++ G
Sbjct: 2 ADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYG 61
Query: 160 AKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAG 219
+ + D + SP+ + G P K + V + +S G+ + ++
Sbjct: 62 GQKRPLEDGDGSWTSPSSTTHWEGMPSPF-KDQPDAKKVAPQNDSFGTQLPPMHQQQRSV 120
Query: 220 SDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSE 279
K+P+ VG +IG+GGE I +Q +G +IQ+ P G ER+ + GT E
Sbjct: 121 MTE-EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP---DSGGLP-ERSCMLTGTPE 175
Query: 280 QIESAKQLVNEVISENR 296
++SAK+L+++++ + R
Sbjct: 176 SVQSAKRLLDQIVEKGR 192
>MGI|MGI:1353633 [details] [associations]
symbol:Fus "fused in sarcoma" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 MGI:MGI:1353633
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:NOG240581 KO:K13098 HOGENOM:HOG000038010 CTD:2521
ChiTaRS:FUS OrthoDB:EOG4DV5NH OMA:YGTQSTP EMBL:AF224264
IPI:IPI00117063 RefSeq:NP_631888.1 UniGene:Mm.277680
ProteinModelPortal:P56959 SMR:P56959 IntAct:P56959 MINT:MINT-136330
STRING:P56959 PhosphoSite:P56959 PaxDb:P56959 PRIDE:P56959
Ensembl:ENSMUST00000106251 GeneID:233908 KEGG:mmu:233908
HOVERGEN:HBG094940 InParanoid:P56959 NextBio:381951 Bgee:P56959
Genevestigator:P56959 GermOnline:ENSMUSG00000030795 Uniprot:P56959
Length = 518
Score = 225 (84.3 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 70/183 (38%), Positives = 89/183 (48%)
Query: 412 SYSQPPASGYNQQG-QGYAQDSYGGY--HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
+Y P GY+QQ Q Y Q SY GY A SGYGQ++ Y G GYG +
Sbjct: 16 AYPTQPGQGYSQQSSQPYGQQSYSGYGQSADTSGYGQSS-YGSSYGQTQNTGYGTQSAPQ 74
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS-YGVPP 527
G T YG+ S+Q+ QSS GYG QQP+P++ S G++Q S YG P
Sbjct: 75 GYGSTGGYGSS-QSSQSSYGQQSS----YPGYG--QQPAPSSTSGSYGGSSQSSSYGQPQ 127
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQAQKPLA-NPP-AYGQTQQ-SPGSAGGYGQPGYSHSQP 584
+ GYG Q SGY G Q+ + NPP YGQ Q + S GG G G ++ Q
Sbjct: 128 SG--GYGQQ----SGYGGQQQSYGQQQSSYNPPQGYGQQNQYNSSSGGGGGGGGGNYGQD 181
Query: 585 PPS 587
S
Sbjct: 182 QSS 184
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 65/179 (36%), Positives = 77/179 (43%)
Query: 429 AQDSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPP 487
A SYG Y P GY Q + Q G S +GYG +TS G + SYG+ TQ
Sbjct: 10 ATQSYGAYPTQPGQGYSQQS--SQPYGQQSYSGYGQSADTSGYGQS-SYGSSYGQTQNTG 66
Query: 488 PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYG 547
SA QGYG+ T Y ++Q SYG +S GYG Q P S YG
Sbjct: 67 YGTQSAP---QGYGS-------TGGYGSSQSSQSSYG-QQSSYPGYGQQPAPSSTSGSYG 115
Query: 548 MPQAQKPLANPPAYGQTQQSPGSAGGYGQP-GYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
+Q +YGQ Q +GGYGQ GY Q SY Q S PP YG
Sbjct: 116 -GSSQSS-----SYGQPQ-----SGGYGQQSGYGGQQ---QSYGQQQSSYN--PPQGYG 158
Score = 165 (63.1 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 66/180 (36%), Positives = 82/180 (45%)
Query: 413 YSQPPASGYN----QQGQGYAQDSYGGY-HAPQSGYGQAAPYDQQQGYNSAAGYGN-VNN 466
Y+Q Y Q GQGY+Q S Y SGYGQ+A GY ++ YG+
Sbjct: 6 YTQQATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYGQSA---DTSGYGQSS-YGSSYGQ 61
Query: 467 TSQEGHTPSYGAQG-DSTQAPPPVQSS-AAMGQQG-Y-GTGQQPSPNTASYPPQGATQPS 522
T G+ QG ST QSS ++ GQQ Y G GQQP+P++ S G++Q S
Sbjct: 62 TQNTGYGTQSAPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSS 121
Query: 523 YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHS 582
P S GYG Q SGY G Q Q +YGQ Q S GYGQ +S
Sbjct: 122 SYGQPQS-GGYGQQ----SGYGG----QQQ-------SYGQQQSSYNPPQGYGQQNQYNS 165
Score = 164 (62.8 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 73/264 (27%), Positives = 86/264 (32%)
Query: 300 PAMAG-GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
P G GYSQQ Q S+ G S GYG G+ GQT GY
Sbjct: 18 PTQPGQGYSQQSSQPYGQQSYSGYGQ-SADTSGYGQSSYGSSYGQTQNT--------GYG 68
Query: 359 SQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPA 418
+Q P GY SY QP +
Sbjct: 69 TQSAPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSSSYGQPQS 128
Query: 419 SGYNQQ-GQGYAQDSYG----GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
GY QQ G G Q SYG Y+ PQ GYGQ Y+ G G GN Q +
Sbjct: 129 GGYGQQSGYGGQQQSYGQQQSSYNPPQ-GYGQQNQYNSSSGGGGGGGGGNYGQ-DQSSMS 186
Query: 474 PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY 533
G G Q QS G GYG GQQ G + S G P + G
Sbjct: 187 GGGGGGGYGNQD----QSGGGGG--GYGGGQQDRGGRGRGGGGGYNRSSGGYEPRGRGGG 240
Query: 534 -----GSQVPPQSGYAGYGMPQAQ 552
G + G+ +G P+ Q
Sbjct: 241 RGGRGGMGGSDRGGFNKFGGPRDQ 264
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 65/184 (35%), Positives = 78/184 (42%)
Query: 410 GYSYSQPPASGYNQQG--QGYAQDS-YGGYHAPQSGYGQAA--P-YDQQQGYNSAAG-YG 462
G SY Q +GY Q QGY YG + QS YGQ + P Y QQ +S +G YG
Sbjct: 56 GSSYGQTQNTGYGTQSAPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYG 115
Query: 463 NVNNTSQEGHTPS--YGAQGD--STQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA 518
+ +S G S YG Q Q Q S+ QGYG QQ N++S G
Sbjct: 116 GSSQSSSYGQPQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYG--QQNQYNSSSGGGGGG 173
Query: 519 TQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
+YG +S SG G G GYG Q Q YG QQ G G G G
Sbjct: 174 GGGNYGQDQSSMSGGG-------GGGGYGN-QDQSG-GGGGGYGGGQQDRGGRGRGGGGG 224
Query: 579 YSHS 582
Y+ S
Sbjct: 225 YNRS 228
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 60/150 (40%), Positives = 74/150 (49%)
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGY-GTGQQPSPNTASYPPQGATQPSY 523
N+ +Q+ T SYGA QSS GQQ Y G GQ S +T+ Y Q + SY
Sbjct: 4 NDYTQQA-TQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYGQ--SADTSGYG-QSSYGSSY 59
Query: 524 GVPPTSQSGYGSQVPPQSGYA---GYGMPQAQKPL----ANPPAYGQTQQSPGS-AGGYG 575
G T +GYG+Q PQ GY GYG Q+ + ++ P YGQ Q +P S +G YG
Sbjct: 60 G--QTQNTGYGTQSAPQ-GYGSTGGYGSSQSSQSSYGQQSSYPGYGQ-QPAPSSTSGSYG 115
Query: 576 QPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
G S S SSY QP SG S YG
Sbjct: 116 --GSSQS----SSYGQPQSGGY-GQQSGYG 138
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 77/259 (29%), Positives = 91/259 (35%)
Query: 338 GAYPGQTPQ-YNM-SQPPYGGYPSQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXX 395
GAYP Q Q Y+ S PYG Q + GY + D
Sbjct: 15 GAYPTQPGQGYSQQSSQPYG----QQSYSGYGQSADTSGYGQSSYGSSYGQTQNTGYGTQ 70
Query: 396 XXXXXXXXXXXXXXGYSYSQPPASGYNQQGQ--GYAQD--------SYGGYHAPQSGYGQ 445
GY SQ S Y QQ GY Q SYGG + S YGQ
Sbjct: 71 SAPQGYGSTG----GYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGG-SSQSSSYGQ 125
Query: 446 AAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ 505
P Q GY +GYG G SYG Q S+ PP QGYG QQ
Sbjct: 126 --P--QSGGYGQQSGYG--------GQQQSYGQQ-QSSYNPP----------QGYG--QQ 160
Query: 506 PSPNTASYPPQGATQPSYGVPPTSQSG------YGSQVPPQSGYAGYGMPQAQKPLANPP 559
N++S G +YG +S SG YG+Q G GYG Q +
Sbjct: 161 NQYNSSSGGGGGGGGGNYGQDQSSMSGGGGGGGYGNQDQSGGGGGGYGGGQQDRGGRGRG 220
Query: 560 AYGQTQQSPGSAGGYGQPG 578
G +S +GGY G
Sbjct: 221 GGGGYNRS---SGGYEPRG 236
>RGD|1308864 [details] [associations]
symbol:Fus "fused in sarcoma" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1308864
GO:GO:0000166 EMBL:CH473956 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 eggNOG:NOG240581
GeneTree:ENSGT00530000063105 KO:K13098 HOGENOM:HOG000038010
CTD:2521 OrthoDB:EOG4DV5NH OMA:YGTQSTP EMBL:BC087153
RefSeq:NP_001012137.1 UniGene:Rn.100218 STRING:Q5PQK2
Ensembl:ENSRNOT00000031891 GeneID:317385 KEGG:rno:317385
UCSC:RGD:1308864 InParanoid:Q5PQK2 NextBio:671703
Genevestigator:Q5PQK2 Uniprot:Q5PQK2
Length = 518
Score = 225 (84.3 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 70/183 (38%), Positives = 89/183 (48%)
Query: 412 SYSQPPASGYNQQG-QGYAQDSYGGY--HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
+Y P GY+QQ Q Y Q SY GY A SGYGQ++ Y G GYG +
Sbjct: 16 AYPTQPGQGYSQQSNQPYGQQSYSGYGQSADTSGYGQSS-YGSSYGQTQNTGYGTQSAPQ 74
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS-YGVPP 527
G T YG+ S+Q+ QSS GYG QQP+P++ S G++Q S YG P
Sbjct: 75 GYGSTGGYGSS-QSSQSSYGQQSS----YPGYG--QQPAPSSTSGSYGGSSQSSSYGQPQ 127
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQAQKPLA-NPP-AYGQTQQ-SPGSAGGYGQPGYSHSQP 584
+ GYG Q SGY G Q+ + NPP YGQ Q + S GG G G ++ Q
Sbjct: 128 SG--GYGQQ----SGYGGQQQSYGQQQSSYNPPQGYGQQNQYNSSSGGGGGGGGGNYGQD 181
Query: 585 PPS 587
S
Sbjct: 182 QSS 184
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 65/179 (36%), Positives = 78/179 (43%)
Query: 429 AQDSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPP 487
A SYG Y P GY Q + +Q G S +GYG +TS G + SYG+ TQ
Sbjct: 10 ATQSYGAYPTQPGQGYSQQS--NQPYGQQSYSGYGQSADTSGYGQS-SYGSSYGQTQNTG 66
Query: 488 PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYG 547
SA QGYG+ T Y ++Q SYG +S GYG Q P S YG
Sbjct: 67 YGTQSAP---QGYGS-------TGGYGSSQSSQSSYG-QQSSYPGYGQQPAPSSTSGSYG 115
Query: 548 MPQAQKPLANPPAYGQTQQSPGSAGGYGQP-GYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
+Q +YGQ Q +GGYGQ GY Q SY Q S PP YG
Sbjct: 116 -GSSQSS-----SYGQPQ-----SGGYGQQSGYGGQQ---QSYGQQQSSYN--PPQGYG 158
Score = 165 (63.1 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 66/180 (36%), Positives = 82/180 (45%)
Query: 413 YSQPPASGYN----QQGQGYAQDSYGGY-HAPQSGYGQAAPYDQQQGYNSAAGYGN-VNN 466
Y+Q Y Q GQGY+Q S Y SGYGQ+A GY ++ YG+
Sbjct: 6 YTQQATQSYGAYPTQPGQGYSQQSNQPYGQQSYSGYGQSA---DTSGYGQSS-YGSSYGQ 61
Query: 467 TSQEGHTPSYGAQG-DSTQAPPPVQSS-AAMGQQG-Y-GTGQQPSPNTASYPPQGATQPS 522
T G+ QG ST QSS ++ GQQ Y G GQQP+P++ S G++Q S
Sbjct: 62 TQNTGYGTQSAPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSS 121
Query: 523 YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHS 582
P S GYG Q SGY G Q Q +YGQ Q S GYGQ +S
Sbjct: 122 SYGQPQS-GGYGQQ----SGYGG----QQQ-------SYGQQQSSYNPPQGYGQQNQYNS 165
Score = 164 (62.8 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 73/264 (27%), Positives = 86/264 (32%)
Query: 300 PAMAG-GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
P G GYSQQ Q S+ G S GYG G+ GQT GY
Sbjct: 18 PTQPGQGYSQQSNQPYGQQSYSGYGQ-SADTSGYGQSSYGSSYGQTQNT--------GYG 68
Query: 359 SQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPA 418
+Q P GY SY QP +
Sbjct: 69 TQSAPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSSSYGQPQS 128
Query: 419 SGYNQQ-GQGYAQDSYG----GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
GY QQ G G Q SYG Y+ PQ GYGQ Y+ G G GN Q +
Sbjct: 129 GGYGQQSGYGGQQQSYGQQQSSYNPPQ-GYGQQNQYNSSSGGGGGGGGGNYGQ-DQSSMS 186
Query: 474 PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY 533
G G Q QS G GYG GQQ G + S G P + G
Sbjct: 187 GGGGGGGYGNQD----QSGGGGG--GYGGGQQDRGGRGRGGGGGYNRSSGGYEPRGRGGG 240
Query: 534 -----GSQVPPQSGYAGYGMPQAQ 552
G + G+ +G P+ Q
Sbjct: 241 RGGRGGMGGSDRGGFNKFGGPRDQ 264
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 65/184 (35%), Positives = 78/184 (42%)
Query: 410 GYSYSQPPASGYNQQG--QGYAQDS-YGGYHAPQSGYGQAA--P-YDQQQGYNSAAG-YG 462
G SY Q +GY Q QGY YG + QS YGQ + P Y QQ +S +G YG
Sbjct: 56 GSSYGQTQNTGYGTQSAPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYG 115
Query: 463 NVNNTSQEGHTPS--YGAQGD--STQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA 518
+ +S G S YG Q Q Q S+ QGYG QQ N++S G
Sbjct: 116 GSSQSSSYGQPQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYG--QQNQYNSSSGGGGGG 173
Query: 519 TQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
+YG +S SG G G GYG Q Q YG QQ G G G G
Sbjct: 174 GGGNYGQDQSSMSGGG-------GGGGYGN-QDQSG-GGGGGYGGGQQDRGGRGRGGGGG 224
Query: 579 YSHS 582
Y+ S
Sbjct: 225 YNRS 228
Score = 157 (60.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 59/150 (39%), Positives = 74/150 (49%)
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGY-GTGQQPSPNTASYPPQGATQPSY 523
N+ +Q+ T SYGA QS+ GQQ Y G GQ S +T+ Y Q + SY
Sbjct: 4 NDYTQQA-TQSYGAYPTQPGQGYSQQSNQPYGQQSYSGYGQ--SADTSGYG-QSSYGSSY 59
Query: 524 GVPPTSQSGYGSQVPPQSGYA---GYGMPQAQKPL----ANPPAYGQTQQSPGS-AGGYG 575
G T +GYG+Q PQ GY GYG Q+ + ++ P YGQ Q +P S +G YG
Sbjct: 60 G--QTQNTGYGTQSAPQ-GYGSTGGYGSSQSSQSSYGQQSSYPGYGQ-QPAPSSTSGSYG 115
Query: 576 QPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
G S S SSY QP SG S YG
Sbjct: 116 --GSSQS----SSYGQPQSGGY-GQQSGYG 138
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 77/259 (29%), Positives = 91/259 (35%)
Query: 338 GAYPGQTPQ-YNM-SQPPYGGYPSQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXX 395
GAYP Q Q Y+ S PYG Q + GY + D
Sbjct: 15 GAYPTQPGQGYSQQSNQPYG----QQSYSGYGQSADTSGYGQSSYGSSYGQTQNTGYGTQ 70
Query: 396 XXXXXXXXXXXXXXGYSYSQPPASGYNQQGQ--GYAQD--------SYGGYHAPQSGYGQ 445
GY SQ S Y QQ GY Q SYGG + S YGQ
Sbjct: 71 SAPQGYGSTG----GYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGG-SSQSSSYGQ 125
Query: 446 AAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ 505
P Q GY +GYG G SYG Q S+ PP QGYG QQ
Sbjct: 126 --P--QSGGYGQQSGYG--------GQQQSYGQQ-QSSYNPP----------QGYG--QQ 160
Query: 506 PSPNTASYPPQGATQPSYGVPPTSQSG------YGSQVPPQSGYAGYGMPQAQKPLANPP 559
N++S G +YG +S SG YG+Q G GYG Q +
Sbjct: 161 NQYNSSSGGGGGGGGGNYGQDQSSMSGGGGGGGYGNQDQSGGGGGGYGGGQQDRGGRGRG 220
Query: 560 AYGQTQQSPGSAGGYGQPG 578
G +S +GGY G
Sbjct: 221 GGGGYNRS---SGGYEPRG 236
>DICTYBASE|DDB_G0277909 [details] [associations]
symbol:cbpP "calcium-binding protein" species:44689
"Dictyostelium discoideum" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR002048
InterPro:IPR011992 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054
dictyBase:DDB_G0277909 Prosite:PS00018 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 EMBL:U03413 RefSeq:XP_642080.1
ProteinModelPortal:P35085 PRIDE:P35085 EnsemblProtists:DDB0214957
GeneID:8621293 KEGG:ddi:DDB_G0277909 eggNOG:NOG135385 OMA:MGAYPPQ
ProtClustDB:CLSZ2846833 Uniprot:P35085
Length = 467
Score = 166 (63.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 75/211 (35%), Positives = 77/211 (36%)
Query: 410 GYSYSQPPASG-Y--NQQGQ-GYAQDSYG--GYHAPQSGYGQAAPYDQQQGYNSAAGYGN 463
GY QP SG Y Q GQ GY G G + PQ G Q Y QQ G
Sbjct: 104 GYPPQQPGQSGQYPPQQPGQPGYPPQQPGAPGQYPPQQG--QPGQYPPQQ-----PGQPG 156
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQSS---AAMGQQGYG-----TGQQPSPNTASYPP 515
Q+G P Q A PP QS A QQG TG P PP
Sbjct: 157 QYPPQQQGQYPPQ--QPGQPGAYPPQQSGQPGAYPPQQGVQNTLAKTGAPGQPGVP--PP 212
Query: 516 QGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYG 575
QGA GVPP Q Y Q PP Y G P A P P AY QQ G
Sbjct: 213 QGAYPGQPGVPP-QQGAYPGQQPPMGAYPPQGQPGAYPPQGQPGAYPPQQQQVAYPGQ-- 269
Query: 576 QPGYSHSQPPPSSYAQPDSGSQRAPPSNYGA 606
QP PP A P G Q A P GA
Sbjct: 270 QPPMGAY--PPQQGAYP--GQQGAYPGQQGA 296
Score = 156 (60.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 71/202 (35%), Positives = 75/202 (37%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGH 472
YSQ P G +Q + G AP GQ P QQ G A G +N
Sbjct: 17 YSQMPVKVMGTPGAPGSQSTPGAPGAP----GQYPP--QQPG---APG----SNLPPYPG 63
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG 532
T GA G Q PP Q G QQP YPPQ QP Y PP Q G
Sbjct: 64 TQQPGAPGAPGQYPPQ--------QPGQYPPQQPGA-PGQYPPQQPGQPGY--PP-QQPG 111
Query: 533 YGSQVPPQS-GYAGYGMPQAQKPLANPPAYGQT----QQSPGSAGGYG--QPG-YSHSQP 584
Q PPQ G GY Q P PP GQ Q PG G Y Q G Y QP
Sbjct: 112 QSGQYPPQQPGQPGYPPQQPGAPGQYPPQQGQPGQYPPQQPGQPGQYPPQQQGQYPPQQP 171
Query: 585 -PPSSYAQPDSGSQRAPPSNYG 605
P +Y SG A P G
Sbjct: 172 GQPGAYPPQQSGQPGAYPPQQG 193
Score = 119 (46.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 32/71 (45%), Positives = 33/71 (46%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGY-GYVQPGAYPGQTPQYNMSQPPYGGYP 358
P G Y Q PP G PG QQPG GY P PGQ+ QY QP GYP
Sbjct: 70 PGAPGQYPPQQPGQYPPQQPGAPGQYPPQQPGQPGY--PPQQPGQSGQYPPQQPGQPGYP 127
Query: 359 -SQP-TPGGYP 367
QP PG YP
Sbjct: 128 PQQPGAPGQYP 138
Score = 107 (42.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 34/83 (40%), Positives = 37/83 (44%)
Query: 298 RNPAMAGGY--SQQGYQARPPTSWGTPGA--PSMQQPG-YGYVQPGAYPGQTP-----QY 347
+ P +G Y Q G PP G PG P QPG Y QPG PGQ P QY
Sbjct: 108 QQPGQSGQYPPQQPGQPGYPPQQPGAPGQYPPQQGQPGQYPPQQPGQ-PGQYPPQQQGQY 166
Query: 348 NMSQPPY-GGYPSQPT--PGGYP 367
QP G YP Q + PG YP
Sbjct: 167 PPQQPGQPGAYPPQQSGQPGAYP 189
Score = 105 (42.0 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 32/75 (42%), Positives = 34/75 (45%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQ-PGYGYVQPGAYPGQTPQYNMSQ-PPYG 355
+NP AG + Y P GTPGAP Q PG PG YP Q P S PPY
Sbjct: 5 QNPPPAGS-AADFYSQMPVKVMGTPGAPGSQSTPGAPGA-PGQYPPQQPGAPGSNLPPYP 62
Query: 356 G--YPSQP-TPGGYP 367
G P P PG YP
Sbjct: 63 GTQQPGAPGAPGQYP 77
Score = 100 (40.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 56/202 (27%), Positives = 68/202 (33%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G + PP G G PQ Y QQG +
Sbjct: 183 GQPGAYPPQQGVQNTLAKTGAPGQPGVPPPQGAYPGQPGVPPQQGAYPGQ-QPPMGAYPP 241
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYP-PQGATQPSYGVPPT 528
+G +Y QG PP Q A GQQ G P P +YP QGA G P
Sbjct: 242 QGQPGAYPPQGQPGAYPPQQQQVAYPGQQP-PMGAYP-PQQGAYPGQQGAYPGQQGAYPG 299
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSS 588
Q Y Q PP Y G Q Q ++ AY QT + G Y PG Q P
Sbjct: 300 QQGAYPGQ-PPMGAYPG----QQQYGVS---AYSQTTAAY-QTGAY--PG----QTPMGV 344
Query: 589 Y-AQPDS-GSQRAPPSNYGAAT 608
Y Q + + + YGA +
Sbjct: 345 YPGQTTAYAAYQTTAIGYGATS 366
Score = 96 (38.9 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 32/74 (43%), Positives = 32/74 (43%)
Query: 300 PAMAGGYSQQGYQARP---PTSWGTPGAPSMQQPGY-GYVQPGAYPGQTPQYNMSQPPYG 355
P G S G P P PGAP P Y G QPGA PG QY QP G
Sbjct: 28 PGAPGSQSTPGAPGAPGQYPPQ--QPGAPGSNLPPYPGTQQPGA-PGAPGQYPPQQP--G 82
Query: 356 GYP-SQP-TPGGYP 367
YP QP PG YP
Sbjct: 83 QYPPQQPGAPGQYP 96
Score = 94 (38.1 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 27/53 (50%), Positives = 27/53 (50%)
Query: 320 GTPGAPSM---QQPG-YGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG-YP 367
G PGAP QQPG Y QPGA PGQ P QP Y P QP G YP
Sbjct: 68 GAPGAPGQYPPQQPGQYPPQQPGA-PGQYPPQQPGQPGYP--PQQPGQSGQYP 117
Score = 94 (38.1 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 28/61 (45%), Positives = 29/61 (47%)
Query: 315 PPTSWGTPGA-----PSMQQPGYGYVQPGAYPGQTP-QYNMSQPPYGG-YP-SQPTPGGY 366
PP G PG+ P QQPG PG YP Q P QY QP G YP QP GY
Sbjct: 47 PPQQPGAPGSNLPPYPGTQQPGAPGA-PGQYPPQQPGQYPPQQPGAPGQYPPQQPGQPGY 105
Query: 367 P 367
P
Sbjct: 106 P 106
>UNIPROTKB|F1PBJ4 [details] [associations]
symbol:FUS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 OMA:YGTQSTP EMBL:AAEX03004378
EMBL:AAEX03004379 Ensembl:ENSCAFT00000026694 Uniprot:F1PBJ4
Length = 517
Score = 219 (82.2 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 67/174 (38%), Positives = 82/174 (47%)
Query: 412 SYSQPPASGYNQQG-QGYAQDSYGGY--HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
+Y P GY+QQ Q Y Q SY GY A SGYGQ++ Y G GYG +
Sbjct: 16 AYPTQPGQGYSQQSNQPYGQQSYSGYGQSADTSGYGQSS-YGSSYGQTQNTGYGTQSTPQ 74
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG-Y-GTGQQPSPNTASYPPQGATQPS-YGV 525
G T YG S+Q S ++ GQQ Y G GQQP+P++ S +Q S YG
Sbjct: 75 GYGSTGGYG----SSQG-----SQSSYGQQSSYPGYGQQPAPSSTSGSYGSGSQSSGYGQ 125
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPP-AYGQTQQSPGSAGGYGQPG 578
P + GYG Q GYG Q+ NPP YGQ Q S+GG G G
Sbjct: 126 PQSG--GYGQQSGYSGQQQGYGQQQSSY---NPPQGYGQQNQYNSSSGGGGGGG 174
Score = 175 (66.7 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 58/168 (34%), Positives = 70/168 (41%)
Query: 429 AQDSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPP 487
A SYG Y P GY Q + +Q G S +GYG +TS G + SYG+ TQ
Sbjct: 10 ATQSYGAYPTQPGQGYSQQS--NQPYGQQSYSGYGQSADTSGYGQS-SYGSSYGQTQ--- 63
Query: 488 PVQSSAAMGQQGYGTGQQPSP--NTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAG 545
GYGT P +T Y +Q SYG +S GYG Q P S
Sbjct: 64 ---------NTGYGTQSTPQGYGSTGGYGSSQGSQSSYG-QQSSYPGYGQQPAPSSTSGS 113
Query: 546 YGMPQAQKPLANPPAYGQTQQS--PGSAGGYGQPGYSHSQPPPSSYAQ 591
YG P + G QQS G GYGQ S++ PP Y Q
Sbjct: 114 YGSGSQSSGYGQPQSGGYGQQSGYSGQQQGYGQQQSSYN--PPQGYGQ 159
Score = 156 (60.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 72/263 (27%), Positives = 87/263 (33%)
Query: 300 PAMAG-GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
P G GYSQQ Q S+ G S GYG G+ GQT GY
Sbjct: 18 PTQPGQGYSQQSNQPYGQQSYSGYGQ-SADTSGYGQSSYGSSYGQTQNT--------GYG 68
Query: 359 SQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPA 418
+Q TP GY Y QP +
Sbjct: 69 TQSTPQGYGSTGGYGSSQGSQSSYGQQSSYPGYGQQPAPSSTSGSYGSGSQSSGYGQPQS 128
Query: 419 SGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVN----NTSQEGHTP 474
GY QQ GY+ G Y QS Y Y QQ YNS++G G N Q+ +
Sbjct: 129 GGYGQQS-GYSGQQQG-YGQQQSSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSM 186
Query: 475 SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY- 533
S G G Q QS G GYG GQQ G + S G P + G
Sbjct: 187 SGGGGGYGNQD----QSG---GGGGYGGGQQDRGGRGRGGGGGYNRSSGGYEPRGRGGGR 239
Query: 534 ----GSQVPPQSGYAGYGMPQAQ 552
G + G+ +G P+ Q
Sbjct: 240 GGRGGMGGSDRGGFNKFGGPRDQ 262
Score = 155 (59.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 64/174 (36%), Positives = 73/174 (41%)
Query: 410 GYSYSQPPASGYNQQG--QGYAQDS-YGGYHAPQSGYGQAA--P-YDQQQGYNSAAG-YG 462
G SY Q +GY Q QGY YG QS YGQ + P Y QQ +S +G YG
Sbjct: 56 GSSYGQTQNTGYGTQSTPQGYGSTGGYGSSQGSQSSYGQQSSYPGYGQQPAPSSTSGSYG 115
Query: 463 NVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQG-ATQP 521
+ + +S G P G G QS + QQGYG QQ S N PPQG Q
Sbjct: 116 SGSQSSGYGQ-PQSGGYGQ--------QSGYSGQQQGYGQ-QQSSYN----PPQGYGQQN 161
Query: 522 SYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYG 575
Y S SG G G YG Q+ YG QS G GGYG
Sbjct: 162 QYN----SSSGGGGG---GGGGGNYGQDQSSMS-GGGGGYGNQDQS-GGGGGYG 206
Score = 148 (57.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 58/163 (35%), Positives = 74/163 (45%)
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGY-GTGQQPSPNTASYPPQGATQPSY 523
N+ +Q+ T SYGA QS+ GQQ Y G GQ S +T+ Y Q + SY
Sbjct: 4 NDYTQQA-TQSYGAYPTQPGQGYSQQSNQPYGQQSYSGYGQ--SADTSGYG-QSSYGSSY 59
Query: 524 GVPPTSQSGYGSQVPPQSGYA---GYGMPQAQKPL----ANPPAYGQTQQSPGS-AGGYG 575
G T +GYG+Q PQ GY GYG Q + ++ P YGQ Q +P S +G YG
Sbjct: 60 G--QTQNTGYGTQSTPQ-GYGSTGGYGSSQGSQSSYGQQSSYPGYGQ-QPAPSSTSGSYG 115
Query: 576 QPGYS--HSQPPPSSYAQPD--SGSQRA---------PPSNYG 605
S + QP Y Q SG Q+ PP YG
Sbjct: 116 SGSQSSGYGQPQSGGYGQQSGYSGQQQGYGQQQSSYNPPQGYG 158
Score = 38 (18.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 561 YGQTQQSPGSAGGYGQPGY 579
YG ++ G GGY + GY
Sbjct: 459 YGDDRR--GGRGGYDRGGY 475
>WB|WBGene00013347 [details] [associations]
symbol:Y59A8B.10 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00650000093048 eggNOG:NOG258094
KO:K14944 EMBL:AL132898 GeneID:180183 KEGG:cel:CELE_Y59A8B.10
CTD:180183 HSSP:P51513 RefSeq:NP_001256769.1
ProteinModelPortal:Q9GRY9 SMR:Q9GRY9 DIP:DIP-24651N IntAct:Q9GRY9
MINT:MINT-1109012 STRING:Q9GRY9 PaxDb:Q9GRY9 PRIDE:Q9GRY9
EnsemblMetazoa:Y59A8B.10a UCSC:Y59A8B.10 WormBase:Y59A8B.10a
HOGENOM:HOG000017831 InParanoid:Q9GRY9 OMA:LAKYNIM NextBio:908344
ArrayExpress:Q9GRY9 Uniprot:Q9GRY9
Length = 413
Score = 198 (74.8 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 57/188 (30%), Positives = 94/188 (50%)
Query: 114 PSAIPVSYGGYQSMGT--SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEAD 171
P+ +GG + G S KI IP+ VG IIGK GE ++ L+ + ++Q+++++E
Sbjct: 25 PANKKAHFGGEEEGGDHLSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETY 84
Query: 172 LNSPTRSVELMGTPEQIAKAEQLINDVLAE--AESGGSGIVARRLTGQAGSDHFAMKIPN 229
+ R + G I + I D + E A+ GGS + T + M PN
Sbjct: 85 PGTSERICLVKGRLNNIMAVIESIQDKIREKCADQGGSDAFDHKNTSRGAEIKIVM--PN 142
Query: 230 NKVGLVIGKGGETIKNMQARTGARIQVIP-LHLPPGDTSTERTVQI--DGTSEQIESAKQ 286
G+VIGK G IK+++ + G +IQV P TS ER V + D S +++A +
Sbjct: 143 TSAGMVIGKSGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVAHDEASALLQAASR 202
Query: 287 LVNEVISE 294
++ +V S+
Sbjct: 203 VLEKVASD 210
Score = 59 (25.8 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 33/130 (25%), Positives = 45/130 (34%)
Query: 418 ASGYNQQG-QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSY 476
A+G+ G QGY +GG PQ G G G N + ++N T +
Sbjct: 275 AAGFGGGGGQGYGGPQFGGQGGPQFGNGNNKYPMSGLGNNELLSF--LDNLQSTLRTSGF 332
Query: 477 GAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS-GYGS 535
Q S + +Q A G G G A+ Q S G+ S G+G
Sbjct: 333 NEQSVS-EVMQAMQVLAKYNIMGLGLGL----GVAAMAQMRTGQESQGMSANHGSAGFGD 387
Query: 536 QVPPQSGYAG 545
Q G G
Sbjct: 388 GYG-QGGVQG 396
Score = 56 (24.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 29/114 (25%), Positives = 43/114 (37%)
Query: 492 SAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQA 551
++ + ++ +G G PS + S P G G + S + S VP +G G G
Sbjct: 214 ASEINKEDFGKGSGPSGSANSGPSGGGGGGGGGGQSNNNSSFSS-VPAFNGGGGGGG--- 269
Query: 552 QKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
G + G GG GQ GY Q Q +G+ + P S G
Sbjct: 270 ----------GMNVGAAGFGGGGGQ-GYGGPQFGGQGGPQFGNGNNKYPMSGLG 312
Score = 50 (22.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 20/76 (26%), Positives = 26/76 (34%)
Query: 430 QDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSY-GAQGDSTQAPPP 488
++ +G P SG + P G G G NN S P++ G G
Sbjct: 219 KEDFGKGSGP-SGSANSGP---SGGGGGGGGGGQSNNNSSFSSVPAFNGGGGGGGGMNVG 274
Query: 489 VQSSAAMGQQGYGTGQ 504
G QGYG Q
Sbjct: 275 AAGFGGGGGQGYGGPQ 290
Score = 44 (20.5 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 15/47 (31%), Positives = 18/47 (38%)
Query: 562 GQTQQSP-GSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYGAA 607
G P G GG G G S++ SS + G N GAA
Sbjct: 230 GSANSGPSGGGGGGGGGGQSNNNSSFSSVPAFNGGGGGGGGMNVGAA 276
>UNIPROTKB|Q9GRY9 [details] [associations]
symbol:Y59A8B.10 "Protein Y59A8B.10, isoform a"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00650000093048 eggNOG:NOG258094 KO:K14944
EMBL:AL132898 GeneID:180183 KEGG:cel:CELE_Y59A8B.10 CTD:180183
HSSP:P51513 RefSeq:NP_001256769.1 ProteinModelPortal:Q9GRY9
SMR:Q9GRY9 DIP:DIP-24651N IntAct:Q9GRY9 MINT:MINT-1109012
STRING:Q9GRY9 PaxDb:Q9GRY9 PRIDE:Q9GRY9 EnsemblMetazoa:Y59A8B.10a
UCSC:Y59A8B.10 WormBase:Y59A8B.10a HOGENOM:HOG000017831
InParanoid:Q9GRY9 OMA:LAKYNIM NextBio:908344 ArrayExpress:Q9GRY9
Uniprot:Q9GRY9
Length = 413
Score = 198 (74.8 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 57/188 (30%), Positives = 94/188 (50%)
Query: 114 PSAIPVSYGGYQSMGT--SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEAD 171
P+ +GG + G S KI IP+ VG IIGK GE ++ L+ + ++Q+++++E
Sbjct: 25 PANKKAHFGGEEEGGDHLSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETY 84
Query: 172 LNSPTRSVELMGTPEQIAKAEQLINDVLAE--AESGGSGIVARRLTGQAGSDHFAMKIPN 229
+ R + G I + I D + E A+ GGS + T + M PN
Sbjct: 85 PGTSERICLVKGRLNNIMAVIESIQDKIREKCADQGGSDAFDHKNTSRGAEIKIVM--PN 142
Query: 230 NKVGLVIGKGGETIKNMQARTGARIQVIP-LHLPPGDTSTERTVQI--DGTSEQIESAKQ 286
G+VIGK G IK+++ + G +IQV P TS ER V + D S +++A +
Sbjct: 143 TSAGMVIGKSGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVAHDEASALLQAASR 202
Query: 287 LVNEVISE 294
++ +V S+
Sbjct: 203 VLEKVASD 210
Score = 59 (25.8 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 33/130 (25%), Positives = 45/130 (34%)
Query: 418 ASGYNQQG-QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSY 476
A+G+ G QGY +GG PQ G G G N + ++N T +
Sbjct: 275 AAGFGGGGGQGYGGPQFGGQGGPQFGNGNNKYPMSGLGNNELLSF--LDNLQSTLRTSGF 332
Query: 477 GAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS-GYGS 535
Q S + +Q A G G G A+ Q S G+ S G+G
Sbjct: 333 NEQSVS-EVMQAMQVLAKYNIMGLGLGL----GVAAMAQMRTGQESQGMSANHGSAGFGD 387
Query: 536 QVPPQSGYAG 545
Q G G
Sbjct: 388 GYG-QGGVQG 396
Score = 56 (24.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 29/114 (25%), Positives = 43/114 (37%)
Query: 492 SAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQA 551
++ + ++ +G G PS + S P G G + S + S VP +G G G
Sbjct: 214 ASEINKEDFGKGSGPSGSANSGPSGGGGGGGGGGQSNNNSSFSS-VPAFNGGGGGGG--- 269
Query: 552 QKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
G + G GG GQ GY Q Q +G+ + P S G
Sbjct: 270 ----------GMNVGAAGFGGGGGQ-GYGGPQFGGQGGPQFGNGNNKYPMSGLG 312
Score = 50 (22.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 20/76 (26%), Positives = 26/76 (34%)
Query: 430 QDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSY-GAQGDSTQAPPP 488
++ +G P SG + P G G G NN S P++ G G
Sbjct: 219 KEDFGKGSGP-SGSANSGP---SGGGGGGGGGGQSNNNSSFSSVPAFNGGGGGGGGMNVG 274
Query: 489 VQSSAAMGQQGYGTGQ 504
G QGYG Q
Sbjct: 275 AAGFGGGGGQGYGGPQ 290
Score = 44 (20.5 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 15/47 (31%), Positives = 18/47 (38%)
Query: 562 GQTQQSP-GSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYGAA 607
G P G GG G G S++ SS + G N GAA
Sbjct: 230 GSANSGPSGGGGGGGGGGQSNNNSSFSSVPAFNGGGGGGGGMNVGAA 276
>ZFIN|ZDB-GENE-040426-1010 [details] [associations]
symbol:fus "fusion (involved in t(12;16) in
malignant liposarcoma)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 ZFIN:ZDB-GENE-040426-1010 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00530000063105 KO:K13098 CTD:2521 EMBL:BX571714
IPI:IPI00785727 RefSeq:NP_957377.2 UniGene:Dr.114403
Ensembl:ENSDART00000055340 GeneID:394058 KEGG:dre:394058
NextBio:20815017 Bgee:F1R0M4 Uniprot:F1R0M4
Length = 541
Score = 216 (81.1 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 78/213 (36%), Positives = 97/213 (45%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNS------AAGYGN 463
G SYSQP A Y+QQ SYGGY+ QS +APY+Q GY+S + GYG+
Sbjct: 22 GQSYSQPSAQNYSQQ-------SYGGYN--QSSESSSAPYNQG-GYSSNYGQSQSGGYGS 71
Query: 464 VNNTSQEGHTPS---YGAQGDS-TQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGAT 519
+G++ S Y + G S T PPP QS Q Y Q SP +A ++
Sbjct: 72 --QAPSQGYSQSSQSYSSGGYSNTSQPPPAQSGGYSQQSSYSGYNQSSPASAPGGYSSSS 129
Query: 520 QPS-YGVPPT-SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP 577
Q S YG S GYG QSG GYG Q GQ Q S G Y P
Sbjct: 130 QSSGYGQQQQQSGGGYGGS-GGQSG--GYGSSGGQSSGFGGSG-GQHQSSQSGGGSYS-P 184
Query: 578 GYSHSQPPPSSYAQPDS-G----SQRAPPSNYG 605
++S PPP SY Q G +Q +PP + G
Sbjct: 185 SPNYSSPPPQSYGQQSQYGQGGYNQDSPPMSGG 217
Score = 175 (66.7 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 78/263 (29%), Positives = 95/263 (36%)
Query: 328 QQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPGNWDXXXX----XXXXXXXX 383
Q +GY G Y GQ+ Q + SQP Y SQ + GGY + +
Sbjct: 8 QTSSHGY---GGYGGQSGQ-SYSQPSAQNY-SQQSYGGYNQSSESSSAPYNQGGYSSNYG 62
Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXGYSY-SQPP---ASGYNQQGQ--GYAQDSYGGYH 437
GYS SQPP + GY+QQ GY Q S
Sbjct: 63 QSQSGGYGSQAPSQGYSQSSQSYSSGGYSNTSQPPPAQSGGYSQQSSYSGYNQSSPASAP 122
Query: 438 APQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQ 497
S Q++ Y QQQ S GYG G + YG+ G + Q
Sbjct: 123 GGYSSSSQSSGYGQQQ-QQSGGGYGGSG-----GQSGGYGSSGGQSSGFGGSGGQHQSSQ 176
Query: 498 QGYGTGQQPSPNTASYPPQGATQPS-YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLA 556
G G+ PSPN +S PPQ Q S YG Q GY PP SG G G Q
Sbjct: 177 SGGGS-YSPSPNYSSPPPQSYGQQSQYG-----QGGYNQDSPPMSGGGGGGGYGGQDG-- 228
Query: 557 NPPAYGQTQQSP-GSAGGYGQPG 578
Y Q + G GG+G G
Sbjct: 229 ---GYSQDGRGGRGRGGGFGGRG 248
Score = 168 (64.2 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 66/210 (31%), Positives = 84/210 (40%)
Query: 410 GYSYSQPPASG-YNQQG--QGYAQDSYGGY--HAPQSGYGQAAPYDQQQGYNSAAGYGNV 464
GY+ S +S YNQ G Y Q GGY AP GY Q++ Q Y+S GY N
Sbjct: 40 GYNQSSESSSAPYNQGGYSSNYGQSQSGGYGSQAPSQGYSQSS-----QSYSSG-GYSNT 93
Query: 465 NNT--SQEG---HTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGAT 519
+ +Q G SY S+ A P S++ GYG QQ S Y G
Sbjct: 94 SQPPPAQSGGYSQQSSYSGYNQSSPASAPGGYSSSSQSSGYGQQQQQSGG--GYGGSGGQ 151
Query: 520 QPSYGVPPTSQSGYG-SQVPPQSGYAGYGMPQAQKPLANPP--AYGQ---------TQQS 567
YG SG+G S QS +G G ++PP +YGQ Q S
Sbjct: 152 SGGYGSSGGQSSGFGGSGGQHQSSQSGGGSYSPSPNYSSPPPQSYGQQSQYGQGGYNQDS 211
Query: 568 PGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
P +GG G GY Y+Q G +
Sbjct: 212 PPMSGGGGGGGYGGQD---GGYSQDGRGGR 238
Score = 146 (56.5 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 81/305 (26%), Positives = 106/305 (34%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPS---QP 361
GY GY + S+ P A + Q YG + P YN GGY S Q
Sbjct: 13 GYG--GYGGQSGQSYSQPSAQNYSQQSYGGYNQSSESSSAP-YNQ-----GGYSSNYGQS 64
Query: 362 TPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPAS-- 419
GGY G+ GY+ S P ++
Sbjct: 65 QSGGY-GSQAPSQGYSQSSQSYSSGGYSNTSQPPPAQSGGYSQQSSYSGYNQSSPASAPG 123
Query: 420 GYNQQGQ--GYAQD---SYGGYHAPQSGYGQAAPYDQQQGYNSA-AGYGNVNNTSQEGHT 473
GY+ Q GY Q S GGY SG GQ+ Y G +S G G + +SQ G
Sbjct: 124 GYSSSSQSSGYGQQQQQSGGGYGG--SG-GQSGGYGSSGGQSSGFGGSGGQHQSSQSGGG 180
Query: 474 PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT--SQS 531
SY + + +PPP QS Q G G Q SP + G YG SQ
Sbjct: 181 -SY-SPSPNYSSPPP-QSYGQQSQYGQGGYNQDSPPMSG----GGGGGGYGGQDGGYSQD 233
Query: 532 GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG--YSHSQPPPSSY 589
G G + G+ G G + P G+ G GG+ + G H P+
Sbjct: 234 GRGGR-GRGGGFGGRGAGGFDRGGRGGPR-GRGGMGMGDRGGFNKFGGPRDHGAGGPNMQ 291
Query: 590 AQPDS 594
Q +S
Sbjct: 292 EQDNS 296
Score = 141 (54.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 62/198 (31%), Positives = 77/198 (38%)
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGD 481
N GQ + YGGY QSG + P Q Y S YG N +S+ P Y G
Sbjct: 4 NDYGQT-SSHGYGGYGG-QSGQSYSQP--SAQNY-SQQSYGGYNQSSESSSAP-YNQGGY 57
Query: 482 STQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQS 541
S+ S G Q G S ++ SY G + S PP +QSG SQ QS
Sbjct: 58 SSNYGQ--SQSGGYGSQAPSQGY--SQSSQSYSSGGYSNTSQ--PPPAQSGGYSQ---QS 108
Query: 542 GYAGYGMPQAQKPLANPPAYGQTQQSPG-------SAGGYG-----QPGYSHSQPPPSSY 589
Y+GY P + P Y + QS G S GGYG GY S S +
Sbjct: 109 SYSGYNQ---SSPASAPGGYSSSSQSSGYGQQQQQSGGGYGGSGGQSGGYGSSGGQSSGF 165
Query: 590 AQPDSGSQRAPPSNYGAA 607
SG Q + G +
Sbjct: 166 G--GSGGQHQSSQSGGGS 181
>ZFIN|ZDB-GENE-080220-35 [details] [associations]
symbol:arid1aa "AT rich interactive domain 1Aa
(SWI-like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 ZFIN:ZDB-GENE-080220-35 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:BX649265
EMBL:CR524825 IPI:IPI00934197 Ensembl:ENSDART00000135930
ArrayExpress:F1QMS8 Bgee:F1QMS8 Uniprot:F1QMS8
Length = 2286
Score = 186 (70.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 70/202 (34%), Positives = 87/202 (43%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQA-APYDQQQGYNSAAGYGNVNNTSQE 470
SY Q GY QQGQ SY G H P GQ +PY Q A G G SQ+
Sbjct: 369 SYGQQGPGGYMQQGQ----QSYYGQHGPGPHPGQQQSPYPQPSP-GQAGGQGPY---SQQ 420
Query: 471 GH-TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
H T S G G + P Q + QG TG P P+ + Y Q + + P +S
Sbjct: 421 PHATQSSGPHGQT--GTPYQQPHMSQQPQGQMTGPSPGPSQSPYS-QSSAAAAAAAPQSS 477
Query: 530 QSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQS--PGSAGGYGQPGYSHSQPP-- 585
QS Y Q PQS + G QA PPA QTQ S PG Q + QPP
Sbjct: 478 QSPYSQQQVPQSQPSQQGSSQA------PPA-SQTQPSYPPGQGPQQQQQPSASQQPPQT 530
Query: 586 PSSYAQPDSGSQRAP---PSNY 604
P+ +Q +G + P P++Y
Sbjct: 531 PTPASQTPAGHAQMPQGQPTSY 552
Score = 166 (63.5 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 68/207 (32%), Positives = 80/207 (38%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSG--YGQAA-PYDQQQGYNSAAGYGNVNNTSQ 469
Y QP QG Y+Q HA QS +GQ PY QQ + S G + S
Sbjct: 403 YPQPSPGQAGGQGP-YSQQP----HATQSSGPHGQTGTPY--QQPHMSQQPQGQMTGPSP 455
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY--GV-P 526
Y + A P S + QQ Q ++ PP TQPSY G P
Sbjct: 456 GPSQSPYSQSSAAAAAAAPQSSQSPYSQQQVPQSQPSQQGSSQAPPASQTQPSYPPGQGP 515
Query: 527 PTSQSGYGSQVPPQSGY------AGYG-MPQAQKPLA---NPPAYGQTQQSPGSAGGYGQ 576
Q SQ PPQ+ AG+ MPQ Q P + NPP Q QQ P Q
Sbjct: 516 QQQQQPSASQQPPQTPTPASQTPAGHAQMPQGQ-PTSYSQNPPQQQQQQQQPQQQ--QQQ 572
Query: 577 PGYSHSQPPPSSYAQPDSGSQR-APPS 602
Y PPP +Q SQ APPS
Sbjct: 573 SPYQRFPPPPQEISQESFSSQSSAPPS 599
Score = 151 (58.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 68/208 (32%), Positives = 77/208 (37%)
Query: 410 GYSYSQPPASG--YNQQG-QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNN 466
G SQP SG Y+QQ QG G P GYG P G YG
Sbjct: 309 GKMRSQPYGSGGPYSQQPHQGTPSGPQQGPAYPGQGYGPPGPQRYPMGMQGRMQYGQ--- 365
Query: 467 TSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGT--GQQPSPNTASYPPQGATQPSYG 524
PSYG QG QS GQ G G GQQ SP P Q Q Y
Sbjct: 366 -----QMPSYGQQGPGGYMQQGQQSY--YGQHGPGPHPGQQQSPYPQPSPGQAGGQGPYS 418
Query: 525 VPP--TSQSGYGSQV--PPQSGYAGYGMPQAQKPLANP-PAYGQTQQSPGSAGGYG---- 575
P T SG Q P Q + PQ Q +P P+ QS +A
Sbjct: 419 QQPHATQSSGPHGQTGTPYQQPHMSQ-QPQGQMTGPSPGPSQSPYSQSSAAAAAAAPQSS 477
Query: 576 QPGYSHSQPPPSSYAQPDSGSQRAPPSN 603
Q YS Q P S +Q GS +APP++
Sbjct: 478 QSPYSQQQVPQSQPSQ--QGSSQAPPAS 503
Score = 97 (39.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 46/168 (27%), Positives = 62/168 (36%)
Query: 417 PASGYNQQGQGYAQDSYGGYHA-PQSG---YGQA-APYDQ--QQGYNSAAGYGNVNNTSQ 469
P+ G +Q Y+Q S A PQS Y Q P Q QQG + A +
Sbjct: 453 PSPGPSQSP--YSQSSAAAAAAAPQSSQSPYSQQQVPQSQPSQQGSSQAPPASQTQPSYP 510
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASY-PPQGATQPSYGVPPT 528
G P Q ++Q PP + A+ G+ Q P + S PPQ Q
Sbjct: 511 PGQGPQQQQQPSASQQPPQTPTPASQTPAGHAQMPQGQPTSYSQNPPQQQQQQQQPQQQQ 570
Query: 529 SQSGYGSQVPP-----QSGYAGYGM-PQAQKPLANPPAYGQTQQSPGS 570
QS Y PP Q ++ P + PLA+ + Q P S
Sbjct: 571 QQSPYQRFPPPPQEISQESFSSQSSAPPSGPPLASKSSTEDMQGRPSS 618
Score = 95 (38.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 47/201 (23%), Positives = 68/201 (33%)
Query: 412 SYSQ-PPASGYNQQG--QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
SYSQ PP QQ Q Q Y + P Q + Q S + ++T
Sbjct: 551 SYSQNPPQQQQQQQQPQQQQQQSPYQRFPPPPQEISQESFSSQSSAPPSGPPLASKSSTE 610
Query: 469 QEGHTPSY--GAQGDSTQAPPPVQSSAAMG--QQGYGTGQQPSPNTASYPPQGATQPSYG 524
PS G P + + + G G + Q N A P T P G
Sbjct: 611 DMQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPPVG 670
Query: 525 VPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQP 584
P ++ + + P + G MP +P ++ + G S G GY P
Sbjct: 671 SPASASASRSGPLSPTT-MPGNQMPP--RP-SSGQSDGIIHPSMNQPGMGPDRGYMQRNP 726
Query: 585 PPSSYAQPDSGSQRAPPSNYG 605
+ Y P S S +P + G
Sbjct: 727 QMAPYGSPQSSSALSPRQSSG 747
Score = 93 (37.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 58/206 (28%), Positives = 86/206 (41%)
Query: 415 QPPASGYNQQGQGYAQDSYGGYH-APQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
Q P + Q +Q+S+ AP SG A+ + + +++ + + T
Sbjct: 572 QSPYQRFPPPPQEISQESFSSQSSAPPSGPPLASKSSTEDMQGRPSSLPDLSGSIDDLPT 631
Query: 474 PSYGA--QGDSTQAPPPVQSSAAMGQQGYGTGQQP-SPNTASYPPQGA---TQPSYGVPP 527
+ GA G ST V SS G+Q Q P SP+T+ PP G+ S P
Sbjct: 632 GTEGALSPGVSTSG---VSSS--QGEQS-NPAQSPFSPHTS--PPVGSPASASASRSGPL 683
Query: 528 TSQSGYGSQVPPQ--SGYA-GYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHS-Q 583
+ + G+Q+PP+ SG + G P +P P G Q++P A YG P S +
Sbjct: 684 SPTTMPGNQMPPRPSSGQSDGIIHPSMNQPGMGPDR-GYMQRNPQMAP-YGSPQSSSALS 741
Query: 584 PPPSSYAQPDSG----SQRAPPSNYG 605
P SS Q G Q +NYG
Sbjct: 742 PRQSSGGQVHPGMVPYQQNNSMANYG 767
Score = 92 (37.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 53/205 (25%), Positives = 67/205 (32%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSG-YGQA----------APYDQQQGYN-SAAGY 461
S PPA Y Q G Y P G Y A PY+ QQ + A
Sbjct: 1306 SAPPAGSYPNQQPGMFPQQQSNYKRPGDGSYPPAKRHHDGEMFGGPYNAQQPQPPTQAPP 1365
Query: 462 GNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAM--GQQGYGTGQQPSPNTASYPPQGAT 519
+ QE + + S + PP Q+ G+ G P+ + S PPQ
Sbjct: 1366 SGPTSAQQEMYNQYNSSYPGSERRPPGAQNQFPFPFGRDRMQPGTGPN-SQGSMPPQMMG 1424
Query: 520 QPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANP---PAYGQTQQSPGSAGGYGQ 576
P Q G Q GY+ Y P Q P A P P Y +S +
Sbjct: 1425 SQMQSAPDGPQGGMW-QGRGDMGYSNY--PNRQGPPAGPGQGPGYHTMNRSEDMMSS--E 1479
Query: 577 PGYSHSQPPPSSYAQPDSGSQRAPP 601
P +H P QP G A P
Sbjct: 1480 PRMNHDGQWPGP-RQPPFGPGGAGP 1503
Score = 88 (36.0 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 32/96 (33%), Positives = 41/96 (42%)
Query: 276 GTSEQIESAKQLVNEVISENRIRN-PAMAGG-YSQQGYQARPPTSWGTPGAPSMQQPGYG 333
G++ Q Q + ++R+ P +GG YSQQ +Q P G P+ GYG
Sbjct: 290 GSTGQPLGRNQTPGSMDQMGKMRSQPYGSGGPYSQQPHQGTPS---GPQQGPAYPGQGYG 346
Query: 334 YVQPGAYP-GQTP--QYNMSQPPYGGYPSQPTPGGY 366
P YP G QY P YG Q PGGY
Sbjct: 347 PPGPQRYPMGMQGRMQYGQQMPSYG----QQGPGGY 378
Score = 84 (34.6 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 50/170 (29%), Positives = 66/170 (38%)
Query: 443 YGQAAPYDQQQGYNSAAGYGNVN-NTSQEGHTPSYGAQG--DSTQAPPPVQSSAAMGQQG 499
Y Y++ + + G++ Q PS G + PP Q + Q
Sbjct: 1243 YPYGTNYERSRPESGMGPDGSIGPGVPQPNMMPSNAESGMYSPNRYPPQQQRHDSYSSQY 1302
Query: 500 YGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY-----GSQVPPQSGYAG--YGMP-QA 551
G Q +P SYP Q QP G+ P QS Y GS P + + G +G P A
Sbjct: 1303 PG---QSAPPAGSYPNQ---QP--GMFPQQQSNYKRPGDGSYPPAKRHHDGEMFGGPYNA 1354
Query: 552 QKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPP 601
Q+P PP TQ P Q Y+ SSY P GS+R PP
Sbjct: 1355 QQP--QPP----TQAPPSGPTSAQQEMYNQYN---SSY--P--GSERRPP 1391
Score = 81 (33.6 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 26/75 (34%), Positives = 28/75 (37%)
Query: 298 RNPAMAG-GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAY--PGQTPQYNMSQP-P 353
+ PA G GY G Q P G Q P YG PG Y GQ Y P P
Sbjct: 336 QGPAYPGQGYGPPGPQRYPMGMQGRMQY-GQQMPSYGQQGPGGYMQQGQQSYYGQHGPGP 394
Query: 354 YGGYPSQPTPGGYPG 368
+ G P P PG
Sbjct: 395 HPGQQQSPYPQPSPG 409
Score = 76 (31.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 46/149 (30%), Positives = 62/149 (41%)
Query: 239 GGETIKNMQARTGARIQVIPLHLP-PGDTSTERTVQIDGTSEQIESAKQLV-NEVISENR 296
GG++ K Q A ++ P TST Q+ + S ++ S++
Sbjct: 197 GGQSAKQQQPAAAASYSNQRYNMGNPQPTSTPTLNQLLTSPSGARSYPNYPPSDYNSQDG 256
Query: 297 IRNPA-MA--GG-YS--QQGYQAR----PPTSWGTPGAP--SMQQPG----YGYVQPGAY 340
+ PA MA GG Y G+Q R PP S G+ G P Q PG G ++ Y
Sbjct: 257 AKGPADMASSGGQYGGGHPGWQQRSHHPPPMSPGSTGQPLGRNQTPGSMDQMGKMRSQPY 316
Query: 341 PGQTPQYNMSQPPYGGYPSQPTPG-GYPG 368
P Y SQ P+ G PS P G YPG
Sbjct: 317 GSGGP-Y--SQQPHQGTPSGPQQGPAYPG 342
Score = 76 (31.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 24/63 (38%), Positives = 27/63 (42%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPG 364
GY Q+ Q P S + A S +Q G V PG P Q N S YG Q P
Sbjct: 720 GYMQRNPQMAPYGSPQSSSALSPRQSSGGQVHPGMVPYQQ---NNSMANYGPQGGQYGPQ 776
Query: 365 GYP 367
GYP
Sbjct: 777 GYP 779
Score = 66 (28.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 34/141 (24%), Positives = 56/141 (39%)
Query: 13 PSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAA 72
PS + QT P+ A++ P G A P PTSY+ PP + Q Q +++ +
Sbjct: 521 PSASQQPPQT--PTPASQTPAGH-AQMPQGQPTSYSQNPPQQQQQQQ-QPQQQQQQSPYQ 576
Query: 73 RLC---NSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGT 129
R +S E+ + G A K S D++ PS++P G + T
Sbjct: 577 RFPPPPQEISQESFSSQSSAPPSGPPLASK---SSTEDMQG--RPSSLPDLSGSIDDLPT 631
Query: 130 SKKIEI-PNIRVGVIIGKSGE 149
+ + P + + GE
Sbjct: 632 GTEGALSPGVSTSGVSSSQGE 652
>FB|FBgn0038642 [details] [associations]
symbol:Muc91C "Mucin 91C" species:7227 "Drosophila
melanogaster" [GO:0005201 "extracellular matrix structural
constituent" evidence=ISM] [GO:0031012 "extracellular matrix"
evidence=ISM] [GO:0022008 "neurogenesis" evidence=IMP]
EMBL:AE014297 GO:GO:0022008 eggNOG:NOG12793 GO:GO:0031012
GO:GO:0005201 GeneTree:ENSGT00700000104744 RefSeq:NP_650744.1
UniGene:Dm.10760 EnsemblMetazoa:FBtr0083687 GeneID:42246
KEGG:dme:Dmel_CG7709 UCSC:CG7709-RA CTD:42246 FlyBase:FBgn0038642
InParanoid:Q9VE45 OMA:GPYPSAP PhylomeDB:Q9VE45 GenomeRNAi:42246
NextBio:827869 ArrayExpress:Q9VE45 Bgee:Q9VE45 Uniprot:Q9VE45
Length = 950
Score = 199 (75.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 100/337 (29%), Positives = 122/337 (36%)
Query: 309 QGYQARPPTSWGTP-GAPSMQQPGYGYVQPGAY--PGQTPQ--YNMSQP--PYGGYPSQP 361
Q Y A P S+G P AP Q G Y P P Y +P P Y + P
Sbjct: 238 QSYGAPPSASYGPPKSAPPSQSYGAPAPPSSKYGPPKSAPSSSYGAPRPAAPSSSYGA-P 296
Query: 362 TPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGY 421
P P + Y PP+S Y
Sbjct: 297 AP---PSSSYGAPAAPSSSYGAPAAPSSSYGAPAAPSSSYGAPAPPSKSYGAPAPPSSSY 353
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNS--AAGYGNVNNTSQEGHTP----- 474
SYG P S YG AP G + + YG S+ P
Sbjct: 354 GAPAA--PSKSYGAPAPPSSSYGAPAPPSSSYGAPAPPSPSYGAPAPPSKSYGAPAPPSS 411
Query: 475 SYGAQGDSTQ---APPPVQSS---AAMGQQGYGTGQQPSPNTASY-PPQGATQP---SYG 524
SYGA ++ AP P SS A YG PS ++SY PP+ A P SYG
Sbjct: 412 SYGAPAAPSKSYGAPAPPSSSYGAPAPPSSSYGA---PSAPSSSYGPPKPAPAPPSSSYG 468
Query: 525 VPPTSQSGYGSQVPPQSG----YAGYGMPQAQK--PLANPPA--YGQTQ--QSPGSAGGY 574
PP Q+ S +PP S + YG P PL + P+ YG QS GS+G
Sbjct: 469 APP--QAPVSSYLPPASRPSKPSSSYGAPSVSSFVPLPSAPSTNYGAPSKTQSLGSSGYS 526
Query: 575 GQPGYSHSQP--PPSS-YAQPDSGSQR-APPSN-YGA 606
P S+ P PPSS Y P S Q +PPS+ YGA
Sbjct: 527 SGPSSSYEAPVAPPSSSYGAPSSSFQPISPPSSSYGA 563
Score = 182 (69.1 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 65/210 (30%), Positives = 87/210 (41%)
Query: 411 YSYSQP-PASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
Y + P P+S Y SYG + P YG + ++ YG
Sbjct: 177 YPAAAPRPSSSYGPPASR-PSSSYGPPPSRPSQSYGPPPQAKKPHHRRPSSSYGAPRPAP 235
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASY-PPQGATQPSYGVP- 526
+ SYGA ++ PP +A Q YG P+P ++ Y PP+ A SYG P
Sbjct: 236 P---SQSYGAPPSASYGPP----KSAPPSQSYGA---PAPPSSKYGPPKSAPSSSYGAPR 285
Query: 527 PTS-QSGYGSQVPPQSGYAGYGMPQAQ--KPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
P + S YG+ PP S Y P + P A +YG S G P S+
Sbjct: 286 PAAPSSSYGAPAPPSSSYGAPAAPSSSYGAPAAPSSSYGAPAAPSSSYGAPAPPSKSYGA 345
Query: 584 P-PPSS-YAQPDSGSQR----APPSN-YGA 606
P PPSS Y P + S+ APPS+ YGA
Sbjct: 346 PAPPSSSYGAPAAPSKSYGAPAPPSSSYGA 375
Score = 168 (64.2 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 83/308 (26%), Positives = 106/308 (34%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGY 366
S G A P +S+G P APS YG +P P P + PP S P
Sbjct: 431 SSYGAPAPPSSSYGAPSAPSSS---YGPPKPAPAP---PSSSYGAPPQAPVSSYLPPASR 484
Query: 367 PGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQ-----PPASGY 421
P G S S PP+S Y
Sbjct: 485 PSKPSSSYGAPSVSSFVPLPSAPSTNYGAPSKTQSLGSSGYSSGPSSSYEAPVAPPSSSY 544
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGD 481
G S+ P S YG AP G S++G + +S PS G+ G
Sbjct: 545 -----GAPSSSFQPISPPSSSYG--AP---SSGSGSSSGSFSAAPSSLYS-APSKGSSGG 593
Query: 482 STQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQS 541
S Q+ P SA G G PS ++SY ++ S G P + + S P S
Sbjct: 594 SFQSAPSSSYSAPSASANSG-GSYPSAPSSSYSAPSSSSSSGG--PYASAPSSSYSAPSS 650
Query: 542 GYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGY-GQPGYSHSQPPPSSYAQPDSGSQ--R 598
G + G P P A +Y S S G Y P S+S P P S +SG
Sbjct: 651 G-SNSGGPY---PAAPSSSYSAPSASANSGGSYPSAPSSSYSAPSPGS----NSGGPYPA 702
Query: 599 APPSNYGA 606
AP S+Y A
Sbjct: 703 APSSSYSA 710
Score = 166 (63.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 75/323 (23%), Positives = 106/323 (32%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPS 359
P+ GY + P +S+ P AP P Y P + + PP Y +
Sbjct: 514 PSKTQSLGSSGYSSGPSSSYEAPVAP----PSSSYGAPSS------SFQPISPPSSSYGA 563
Query: 360 QPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPAS 419
P+ G + G SY P+S
Sbjct: 564 -PSSGSGSSSGSFSAAPSSLYSAPSKGSSGGSFQSAPSSSYSAPSASANSGGSYPSAPSS 622
Query: 420 GYN------QQGQGYAQDSYGGYHAPQSGYGQAAPYDQ--QQGYNSAAGYGNVNNTSQEG 471
Y+ G YA Y AP SG PY Y++ + N +
Sbjct: 623 SYSAPSSSSSSGGPYASAPSSSYSAPSSGSNSGGPYPAAPSSSYSAPSASANSGGSYPSA 682
Query: 472 HTPSYGAQ--GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
+ SY A G ++ P P S++ Y + PS N+ P A SY P +S
Sbjct: 683 PSSSYSAPSPGSNSGGPYPAAPSSS-----Y-SAPSPSANSGG-PYASAPSSSYSAPSSS 735
Query: 530 QSGYGSQVP-PQSGYAGYGMPQAQK-PLANPPA--YGQTQQSPGSAGGY-GQPGYSHSQP 584
+ G P S Y+ + P + P+ Y S S G Y P S++ P
Sbjct: 736 SNSGGPYAAAPSSSYSAPSSSSSSGGPYPSAPSSSYSAPSSSLSSGGPYPSAPSSSYAAP 795
Query: 585 PPSSYAQPDSGSQRAPPSN-YGA 606
PSS + G A PSN Y A
Sbjct: 796 SPSSNS---GGPYPAAPSNSYSA 815
Score = 161 (61.7 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 79/325 (24%), Positives = 107/325 (32%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTP-----GAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPY 354
P+ G S + A P + + P G P Y P A Y + P
Sbjct: 564 PSSGSGSSSGSFSAAPSSLYSAPSKGSSGGSFQSAPSSSYSAPSASANSGGSYPSA--PS 621
Query: 355 GGYPSQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYS 414
Y S P+ G G SY
Sbjct: 622 SSY-SAPSSSSSSGGPYASAPSSSYSAPSSGSNSGGPYPAAPSSSYSAPSASANSGGSYP 680
Query: 415 QPPASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAPYDQQQG-YNSA--AGYGNVNNTSQE 470
P+S Y+ G +S G Y A P S Y +P G Y SA + Y +++S
Sbjct: 681 SAPSSSYSAPSPG--SNSGGPYPAAPSSSYSAPSPSANSGGPYASAPSSSYSAPSSSSNS 738
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-PSPNTASYPPQ-GATQPSYGVP-P 527
G P A S AP SS + PS + +S P A SY P P
Sbjct: 739 GG-PYAAAPSSSYSAPSSSSSSGGPYPSAPSSSYSAPSSSLSSGGPYPSAPSSSYAAPSP 797
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQAQK---PLANP-PAYGQTQQSPGSAG-GYGQPGYSHS 582
+S SG P + Y+ P + P + P P++ S G+ G G +S S
Sbjct: 798 SSNSGGPYPAAPSNSYSAPIAPPSSSYGAPASGPSPSFSAPSSSYGAPSTGSGSSSFSSS 857
Query: 583 QPPPSSYAQPDS-GSQRAPPSNYGA 606
S + S G AP S+YGA
Sbjct: 858 SSSFSGASSSSSAGYPSAPSSSYGA 882
Score = 159 (61.0 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 82/315 (26%), Positives = 111/315 (35%)
Query: 303 AGGYSQ---QGYQA--RPPTS-WGTPGAP--SMQQPGYGYVQPGAYPGQTPQYNMSQPPY 354
+ GYS Y+A PP+S +G P + + P Y P + G + + S P
Sbjct: 522 SSGYSSGPSSSYEAPVAPPSSSYGAPSSSFQPISPPSSSYGAPSSGSGSSSG-SFSAAPS 580
Query: 355 GGYPSQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYS 414
Y S P+ G G++ G Y+
Sbjct: 581 SLY-SAPSKGSSGGSFQSAPSSSYSAPSASANSGGSYPSAPSSSYSAPSSSSSSGG-PYA 638
Query: 415 QPPASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAPYDQQQG-YNSA--AGYGNVNNTSQE 470
P+S Y+ G +S G Y A P S Y + G Y SA + Y + S
Sbjct: 639 SAPSSSYSAPSSG--SNSGGPYPAAPSSSYSAPSASANSGGSYPSAPSSSYSAPSPGSNS 696
Query: 471 GHTPSYGAQGDSTQAPPP-VQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
G P A S AP P S + PS ++ S P A S P+S
Sbjct: 697 GG-PYPAAPSSSYSAPSPSANSGGPYASAPSSSYSAPSSSSNSGGPYAAAPSSSYSAPSS 755
Query: 530 QSGYGSQVP--PQSGYAGYGMPQAQK-PLANPPAYGQTQQSPGS-AGG-Y-GQPGYSHSQ 583
S G P P S Y+ + P + P+ SP S +GG Y P S+S
Sbjct: 756 SSSSGGPYPSAPSSSYSAPSSSLSSGGPYPSAPSSSYAAPSPSSNSGGPYPAAPSNSYSA 815
Query: 584 P--PPSS-YAQPDSG 595
P PPSS Y P SG
Sbjct: 816 PIAPPSSSYGAPASG 830
Score = 158 (60.7 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 66/288 (22%), Positives = 97/288 (33%)
Query: 303 AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ-- 360
+G S Y A P +S+ P A + Y +Y +P N S PY PS
Sbjct: 650 SGSNSGGPYPAAPSSSYSAPSASANSGGSYPSAPSSSYSAPSPGSN-SGGPYPAAPSSSY 708
Query: 361 --PTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPA 418
P+P G G Y P+
Sbjct: 709 SAPSPSANSGGPYASAPSSSYSAPSSSSNSGGPYAAAPSSSYSAPSSSSSSGGPYPSAPS 768
Query: 419 SGYNQQGQGYAQDSYGGY-HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYG 477
S Y+ + S G Y AP S Y +P G AA N + + SYG
Sbjct: 769 SSYSAPSSSLS--SGGPYPSAPSSSYAAPSPSSNSGGPYPAAP-SNSYSAPIAPPSSSYG 825
Query: 478 AQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQV 537
A S +P S++ G G+G +++S ++ S G P S YG+
Sbjct: 826 APA-SGPSPSFSAPSSSYGAPSTGSGSSSFSSSSSSFSGASSSSSAGYPSAPSSSYGA-- 882
Query: 538 PPQSGYAGYGMPQA-QKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQP 584
P +G +G+ A + PPA G + P + GY ++ P
Sbjct: 883 -PSTG-SGHSFSSAPSSSYSAPPAGGSSSSGPYPSAPSQDSGYEYNGP 928
Score = 151 (58.2 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 73/294 (24%), Positives = 98/294 (33%)
Query: 316 PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPGNWDXXXX 375
P+S G P P Y P A Y + P Y S P+PG G
Sbjct: 648 PSSGSNSGGPYPAAPSSSYSAPSASANSGGSYPSA--PSSSY-SAPSPGSNSGGPYPAAP 704
Query: 376 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQQGQGYAQDSYGG 435
G Y+ P+S Y+ + S G
Sbjct: 705 SSSYSAPSPSANSGGPYASAPSSSYSAPSSSSNSGGPYAAAPSSSYSAPSS--SSSSGGP 762
Query: 436 Y-HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSA- 493
Y AP S Y +AP +S Y + ++S +PS + G AP S+
Sbjct: 763 YPSAPSSSY--SAP---SSSLSSGGPYPSAPSSSYAAPSPSSNSGGPYPAAPSNSYSAPI 817
Query: 494 AMGQQGYGT-GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQ 552
A YG PSP+ ++ P PS G +S S S S + G P A
Sbjct: 818 APPSSSYGAPASGPSPSFSA-PSSSYGAPSTGSGSSSFSSSSSSFSGASSSSSAGYPSAP 876
Query: 553 KPLANPPAYGQTQQ-SPGSAGGYGQP---GYSHSQPPPSSYAQPDSGSQRAPPS 602
P+ G S + Y P G S S P PS+ +Q DSG + PS
Sbjct: 877 SSSYGAPSTGSGHSFSSAPSSSYSAPPAGGSSSSGPYPSAPSQ-DSGYEYNGPS 929
Score = 146 (56.5 bits), Expect = 9.9e-13, Sum P(3) = 9.9e-13
Identities = 59/209 (28%), Positives = 78/209 (37%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYG--QAAPYDQQQGYNSA--AGYGNVNN 466
Y PP+S Y SYG AP S YG + AP Y + A +
Sbjct: 423 YGAPAPPSSSYGAPAP--PSSSYGAPSAPSSSYGPPKPAPAPPSSSYGAPPQAPVSSYLP 480
Query: 467 TSQEGHTPS--YGAQGDSTQAPPPVQSSAAMGQ----QGYGT-GQQPSPNTASYPPQGAT 519
+ PS YGA S+ P P S G Q G+ G P+++ P
Sbjct: 481 PASRPSKPSSSYGAPSVSSFVPLPSAPSTNYGAPSKTQSLGSSGYSSGPSSSYEAPVAPP 540
Query: 520 QPSYGVPPTSQSGYGSQVPPQSGYAG--YGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP 577
SYG P +S + PP S Y G + + P+ + S GS+GG Q
Sbjct: 541 SSSYGAPSSS---FQPISPPSSSYGAPSSGSGSSSGSFSAAPSSLYSAPSKGSSGGSFQS 597
Query: 578 GYSHSQPPPSSYAQPDSGSQRAPPSNYGA 606
S S PS+ A AP S+Y A
Sbjct: 598 APSSSYSAPSASANSGGSYPSAPSSSYSA 626
Score = 143 (55.4 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 55/161 (34%), Positives = 70/161 (43%)
Query: 467 TSQEGHTPSYGAQGDSTQAPP---PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS- 522
+S + + YGA S+ PP P S + Y Q + + YP A +PS
Sbjct: 128 SSPQRPSSKYGAPPVSSYLPPASGPAPSFNSAPSSSYAAPSQSASSGGPYPA-AAPRPSS 186
Query: 523 -YGVPPTSQ--SGYGSQVPPQSGYAGYGMP-QAQKPLANPPA--YGQTQQSPGSAGGYGQ 576
YG PP S+ S YG PP YG P QA+KP P+ YG + +P S YG
Sbjct: 187 SYG-PPASRPSSSYGP--PPSRPSQSYGPPPQAKKPHHRRPSSSYGAPRPAPPSQS-YGA 242
Query: 577 P-----GYSHSQPPPSSYAQPDSGSQR------APPSNYGA 606
P G S PP SY P S + AP S+YGA
Sbjct: 243 PPSASYGPPKSAPPSQSYGAPAPPSSKYGPPKSAPSSSYGA 283
Score = 139 (54.0 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 62/215 (28%), Positives = 85/215 (39%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
Y PP+ Y SYG P S YG AP + Y + A + + +
Sbjct: 383 YGAPAPPSPSYGAPAP--PSKSYGAPAPPSSSYG--APAAPSKSYGAPAPPSS-SYGAPA 437
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA-TQPS--YGVPP 527
+ SYGA + + P + + A YG Q +P ++ PP ++PS YG P
Sbjct: 438 PPSSSYGAPSAPSSSYGPPKPAPAPPSSSYGAPPQ-APVSSYLPPASRPSKPSSSYGAPS 496
Query: 528 TSQSGYGSQVP-PQSGYAGYGMPQAQKPLAN------PPAYGQTQQSPGSAGGYGQPGYS 580
S S VP P + YG P + L + P + + +P S+ YG P S
Sbjct: 497 VS-----SFVPLPSAPSTNYGAPSKTQSLGSSGYSSGPSSSYEAPVAPPSSS-YGAPSSS 550
Query: 581 HS--QPPPSSYAQPDSGS-------QRAPPSNYGA 606
PP SSY P SGS AP S Y A
Sbjct: 551 FQPISPPSSSYGAPSSGSGSSSGSFSAAPSSLYSA 585
Score = 135 (52.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 70/318 (22%), Positives = 98/318 (30%)
Query: 303 AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ-- 360
A S Y + P +S+ P + S Y +Y + N S PY PS
Sbjct: 608 ASANSGGSYPSAPSSSYSAPSSSSSSGGPYASAPSSSYSAPSSGSN-SGGPYPAAPSSSY 666
Query: 361 --PTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPA 418
P+ G G Y+ P+
Sbjct: 667 SAPSASANSGGSYPSAPSSSYSAPSPGSNSGGPYPAAPSSSYSAPSPSANSGGPYASAPS 726
Query: 419 SGYN------QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGH 472
S Y+ G YA Y AP S PY + +A ++ S G
Sbjct: 727 SSYSAPSSSSNSGGPYAAAPSSSYSAPSSSSSSGGPYPSAPSSSYSAPSSSL---SSGGP 783
Query: 473 TPSYGAQGDSTQAPPPVQSSA----AMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
PS A S AP P +S A Y P P+++ P PS+ P +
Sbjct: 784 YPS--APSSSYAAPSPSSNSGGPYPAAPSNSYSAPIAP-PSSSYGAPASGPSPSFSAPSS 840
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP----GYSHSQP 584
S YG+ P +G + + + + YG P G+S S
Sbjct: 841 S---YGA---PSTGSGSSSFSSSSSSFSGASSSSSAGYPSAPSSSYGAPSTGSGHSFSSA 894
Query: 585 PPSSY-AQPDSGSQRAPP 601
P SSY A P GS + P
Sbjct: 895 PSSSYSAPPAGGSSSSGP 912
Score = 88 (36.0 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 36/116 (31%), Positives = 49/116 (42%)
Query: 7 YSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRR 66
Y + PS KY PP +A + + AP PA +SY + PP+ + AA
Sbjct: 260 YGAPAPPSS-KYG----PPKSAPS--SSYGAPRPAAPSSSYGAPAPPSSSY-GAPAAPSS 311
Query: 67 AEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYG 122
+ A +S A A P G+ S G +PPS S AP+A SYG
Sbjct: 312 SYGAPAAPSSSYGAPAA-PSSSYGAPAPPSKSYGAPAPPSS--SYGAPAAPSKSYG 364
Score = 85 (35.0 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 39/138 (28%), Positives = 57/138 (41%)
Query: 412 SYSQP---PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAG-YGNVNNT 467
SYS P P+S Y G + + AP S YG + ++S++ + +++
Sbjct: 812 SYSAPIAPPSSSYGAPASGPSPS----FSAPSSSYGAPSTGSGSSSFSSSSSSFSGASSS 867
Query: 468 SQEGH--TPS--YGA----QGDSTQAPPPVQSSAAMGQQGYGTGQQPS-PNTAS-YPPQG 517
S G+ PS YGA G S + P SA +G PS P+ S Y G
Sbjct: 868 SSAGYPSAPSSSYGAPSTGSGHSFSSAPSSSYSAPPAGGSSSSGPYPSAPSQDSGYEYNG 927
Query: 518 ATQPSYGVPPTSQSGYGS 535
+Q VP T Q Y +
Sbjct: 928 PSQ----VPDTIQQSYSA 941
Score = 84 (34.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 45/160 (28%), Positives = 63/160 (39%)
Query: 2 ADEPQYSSDGTPSKRKYEDQTTPPSAAARRPTG----FSAPDPAVAPTSYN-SVPPPADE 56
A Y + PS Y PPS++ P+ + P PA AP S + PP A
Sbjct: 418 APSKSYGAPAPPSS-SY-GAPAPPSSSYGAPSAPSSSYGPPKPAPAPPSSSYGAPPQAPV 475
Query: 57 FQDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDS-----ADKGFSSPPSDLKSI 111
A R ++ ++ SVS+ P + + G S G+SS PS S
Sbjct: 476 SSYLPPASRPSKPSSSYGAPSVSSFVPLPSAPSTNYGAPSKTQSLGSSGYSSGPSS--SY 533
Query: 112 PAPSAIPVS-YGGYQSMGTSKKIEIPNIRVGVIIGKSGET 150
AP A P S YG S + + I P+ G SG +
Sbjct: 534 EAPVAPPSSSYGAPSS--SFQPISPPSSSYGAPSSGSGSS 571
Score = 79 (32.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 37/131 (28%), Positives = 50/131 (38%)
Query: 2 ADEPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAP--TSYNSVPPPADEFQD 59
A Y + PSK Y PPS++ P S A AP +SY + PP+ +
Sbjct: 328 APSSSYGAPAPPSK-SY-GAPAPPSSSYGAPAAPSKSYGAPAPPSSSYGAPAPPSSSY-G 384
Query: 60 FQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
A + A S A A P G+ S G +PPS PAP +
Sbjct: 385 APAPPSPSYGAPAPPSKSYGAPAP-PSSSYGAPAAPSKSYGAPAPPSSSYGAPAPPSS-- 441
Query: 120 SYGGYQSMGTS 130
SYG + +S
Sbjct: 442 SYGAPSAPSSS 452
Score = 78 (32.5 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 37/124 (29%), Positives = 48/124 (38%)
Query: 2 ADEPQYSSDGTPS--KRKYEDQTTPP-SAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQ 58
A P S G P+ Y P S A P S PA +SY + PP+ +
Sbjct: 335 APAPPSKSYGAPAPPSSSYGAPAAPSKSYGAPAPPSSSYGAPAPPSSSYGAPAPPSPSY- 393
Query: 59 DFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIP 118
A ++ A +S A A P G+ S+ G +PPS S APSA
Sbjct: 394 GAPAPPSKSYGAPAPPSSSYGAPAA-PSKSYGAPAPPSSSYGAPAPPSS--SYGAPSAPS 450
Query: 119 VSYG 122
SYG
Sbjct: 451 SSYG 454
Score = 73 (30.8 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 35/122 (28%), Positives = 50/122 (40%)
Query: 263 PGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQG---YQARPPTSW 319
PG+ ++ VQ+ G A LV +V +E + N + Q+ Y A P +S+
Sbjct: 86 PGEAASVMRVQLFGVIAVAVVAVSLVRDVGAEPPVNNAYLPPSSPQRPSSKYGAPPVSSY 145
Query: 320 GTPG---APSMQQ-PGYGYVQP-------GAYPGQTPQYNMSQ-PP-------YGGYPSQ 360
P APS P Y P G YP P+ + S PP YG PS+
Sbjct: 146 LPPASGPAPSFNSAPSSSYAAPSQSASSGGPYPAAAPRPSSSYGPPASRPSSSYGPPPSR 205
Query: 361 PT 362
P+
Sbjct: 206 PS 207
Score = 71 (30.1 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 30/113 (26%), Positives = 45/113 (39%)
Query: 13 PSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTS--YNSVPPPADEFQDFQAAKRRAEQI 70
PS + PPS + P S P AP S Y + PP+ ++ ++A +
Sbjct: 224 PSSSYGAPRPAPPSQSYGAPPSASYGPPKSAPPSQSYGAPAPPSSKYGPPKSAPSSSYGA 283
Query: 71 AARLCNSVSAEAKRPRVENGSGGFDSA-DKGFSSPPSDLKSIPAPSAIPVSYG 122
S S A P + S G +A + +P + S AP+A SYG
Sbjct: 284 PRPAAPSSSYGAPAP--PSSSYGAPAAPSSSYGAPAAPSSSYGAPAAPSSSYG 334
Score = 70 (29.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/123 (27%), Positives = 46/123 (37%)
Query: 2 ADEPQYSSDGTPSKRKYEDQTTPPSA--AARRPTGFSAPDPAVAPTSYNSVPPPADEFQD 59
A Y + PS Y P S+ A P+ S PA +SY + PP+ +
Sbjct: 288 APSSSYGAPAPPSS-SYGAPAAPSSSYGAPAAPSS-SYGAPAAPSSSYGAPAPPSKSY-G 344
Query: 60 FQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
A + A S A A P G+ S+ G +PPS PAP +
Sbjct: 345 APAPPSSSYGAPAAPSKSYGAPAP-PSSSYGAPAPPSSSYGAPAPPSPSYGAPAPPS--K 401
Query: 120 SYG 122
SYG
Sbjct: 402 SYG 404
Score = 67 (28.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 38/140 (27%), Positives = 50/140 (35%)
Query: 2 ADEPQYSSDGTPSK-RKYEDQTTPPSAA--ARRPTGFSAPDPAVAPTSYNSVPP-PADEF 57
A P SS G P+ K PPS++ A P S P+ +SY P PA
Sbjct: 405 APAPPSSSYGAPAAPSKSYGAPAPPSSSYGAPAPPSSSYGAPSAPSSSYGPPKPAPAPPS 464
Query: 58 QDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAI 117
+ A + +S A RP + S G S P + + APS
Sbjct: 465 SSYGAPPQAP-------VSSYLPPASRPSKPSSSYGAPSVSSFVPLPSAPSTNYGAPSKT 517
Query: 118 P-VSYGGYQSMGTSKKIEIP 136
+ GY S G S E P
Sbjct: 518 QSLGSSGYSS-GPSSSYEAP 536
Score = 67 (28.6 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 23/73 (31%), Positives = 28/73 (38%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQ--PGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
P A S G A P +S+G P APS P GA + Y PP Y
Sbjct: 284 PRPAAPSSSYGAPAPPSSSYGAPAAPSSSYGAPAAPSSSYGAPAAPSSSYGAPAPPSKSY 343
Query: 358 --PSQPTPG-GYP 367
P+ P+ G P
Sbjct: 344 GAPAPPSSSYGAP 356
Score = 66 (28.3 bits), Expect = 9.9e-13, Sum P(3) = 9.9e-13
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY--PSQPTPG 364
S G A P +S+G P PS P YG P P ++ Y PP Y P+ P+
Sbjct: 371 SSYGAPAPPSSSYGAPAPPS---PSYGAPAP---PSKS--YGAPAPPSSSYGAPAAPSKS 422
Query: 365 -GYP 367
G P
Sbjct: 423 YGAP 426
Score = 66 (28.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 33/124 (26%), Positives = 47/124 (37%)
Query: 7 YSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRR 66
YSS PS YE PPS++ P+ S+ P P+S P +
Sbjct: 525 YSSG--PSS-SYEAPVAPPSSSYGAPS--SSFQPISPPSSSYGAPSSGSGSSSGSFSAAP 579
Query: 67 AEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQS 126
+ +A S + + S SA+ G S P + S APS+ S G Y S
Sbjct: 580 SSLYSAPSKGSSGGSFQSAPSSSYSAPSASANSGGSYPSAPSSSYSAPSSSSSSGGPYAS 639
Query: 127 MGTS 130
+S
Sbjct: 640 APSS 643
Score = 64 (27.6 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 23/69 (33%), Positives = 27/69 (39%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQP-----GAYPGQTPQYNMSQPPYGGY--PS 359
S G A P S+G P PS YG P GA +P Y PP Y P+
Sbjct: 351 SSYGAPAAPSKSYGAPAPPSSS---YGAPAPPSSSYGAPAPPSPSYGAPAPPSKSYGAPA 407
Query: 360 QPTPG-GYP 367
P+ G P
Sbjct: 408 PPSSSYGAP 416
Score = 62 (26.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 31/123 (25%), Positives = 46/123 (37%)
Query: 5 PQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSA---PDPAVAPTSYNSVPPPADE-FQDF 60
P SS P+ + PS++ P+ ++ P PA AP +S PPA +
Sbjct: 140 PPVSSYLPPASGPAPSFNSAPSSSYAAPSQSASSGGPYPAAAPRPSSSYGPPASRPSSSY 199
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV- 119
R Q + +RP G+ + + +PPS P SA P
Sbjct: 200 GPPPSRPSQSYGPPPQAKKPHHRRPSSSYGAPRPAPPSQSYGAPPSASYG-PPKSAPPSQ 258
Query: 120 SYG 122
SYG
Sbjct: 259 SYG 261
Score = 62 (26.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 33/138 (23%), Positives = 54/138 (39%)
Query: 2 ADEPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQ 61
A P SS G P + P S ++ + + AP + +S+ VP P+ ++
Sbjct: 459 APAPPSSSYGAPPQAPVSSYLPPASRPSKPSSSYGAP----SVSSF--VPLPSAPSTNYG 512
Query: 62 AAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFS--SPPSDLKSIPAPSAIPV 119
A + ++ + S+ + P V S + + F SPPS S APS+
Sbjct: 513 APSKTQSLGSSGYSSGPSSSYEAP-VAPPSSSYGAPSSSFQPISPPSS--SYGAPSSGSG 569
Query: 120 SYGGYQSMGTSKKIEIPN 137
S G S S P+
Sbjct: 570 SSSGSFSAAPSSLYSAPS 587
Score = 60 (26.2 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 34/131 (25%), Positives = 49/131 (37%)
Query: 5 PQYSSDGTPSKRKYEDQ---TTPPSAAARRPT-GFSAPDPAVAPTSYNSVPPP-ADEFQD 59
P SS G PS + PS+ P+ G S AP+S S P A+
Sbjct: 556 PPSSSYGAPSSGSGSSSGSFSAAPSSLYSAPSKGSSGGSFQSAPSSSYSAPSASANSGGS 615
Query: 60 FQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
+ +A + + +S A P + S ++ G P + S APSA
Sbjct: 616 YPSAPSSSYSAPSSSSSSGGPYASAPS-SSYSAPSSGSNSGGPYPAAPSSSYSAPSASAN 674
Query: 120 SYGGYQSMGTS 130
S G Y S +S
Sbjct: 675 SGGSYPSAPSS 685
Score = 46 (21.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 314 RPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPG 368
RP +S+G P + +P Y P + P Q+ Y PP P P G
Sbjct: 183 RPSSSYGPPAS----RPSSSYGPPPSRPSQS--YG--PPPQAKKPHHRRPSSSYG 229
>ZFIN|ZDB-GENE-041221-2 [details] [associations]
symbol:prnpb "prion protein b" species:7955 "Danio
rerio" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0016338 "calcium-independent
cell-cell adhesion" evidence=IMP] [GO:0007156 "homophilic cell
adhesion" evidence=IDA] [GO:0055113 "epiboly involved in
gastrulation with mouth forming second" evidence=IGI;IMP]
[GO:2000047 "regulation of cell-cell adhesion mediated by cadherin"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007417 "central nervous system development" evidence=IGI]
[GO:0009986 "cell surface" evidence=IDA] InterPro:IPR022416
ZFIN:ZDB-GENE-041221-2 GO:GO:0005886 GO:GO:0009986 GO:GO:0051260
GO:GO:0007156 GO:GO:0055113 GO:GO:0016338 Gene3D:1.10.790.10
SUPFAM:SSF54098 EMBL:AJ850286 IPI:IPI00485089 UniGene:Dr.90045
ProteinModelPortal:Q5K0E1 PRIDE:Q5K0E1 HOVERGEN:HBG056090
InParanoid:Q5K0E1 Bgee:Q5K0E1 GO:GO:2000047 Uniprot:Q5K0E1
Length = 606
Score = 149 (57.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 68/253 (26%), Positives = 89/253 (35%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYG-YVQPGAYP--GQTPQYNMSQPPY 354
+NP AG Y G P +PG Q PG G Y G+YP G P + Y
Sbjct: 85 QNPG-AGSYPAGGSYPYPGRGGSSPGGYPNQNPGAGSYPSGGSYPSAGGNPNQYPGRGGY 143
Query: 355 --GGYPSQ-PTPGGYP--GNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-X 408
GGYP+Q P G YP G++
Sbjct: 144 NPGGYPNQNPGAGSYPAGGSYPSAGGNPNQYPGRGGTSPAGYPNQNPGAGSYPAGGSYPS 203
Query: 409 XGYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
G + +Q P G + G GY + G P G +A + Q Y G N +
Sbjct: 204 AGGNPNQYPGRGGSNPG-GYPNQNPGAGSYPAGGSYPSAGGNPNQ-YPGRGGSSPGGNPN 261
Query: 469 QEGHTPSYGAQGDSTQAPPPV-QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS-Y-GV 525
Q +Y G Q P S+ G+ GY G P SYP + A QP Y G
Sbjct: 262 QNPGAGTYAGGGYPNQYPGGGGYSNQNPGRSGYSPGGYPG--AGSYPVRNAGQPGVYPGA 319
Query: 526 PPTSQSGYGSQVP 538
P++ GY + P
Sbjct: 320 HPSAGGGYPNWNP 332
Score = 147 (56.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 66/213 (30%), Positives = 80/213 (37%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G S P GY Q G GG + P +G G Y + GYN GY N N +
Sbjct: 102 GRGGSSP--GGYPNQNPGAGSYPSGGSY-PSAG-GNPNQYPGRGGYNPG-GYPNQNPGAG 156
Query: 470 E----GHTPSYGAQGDSTQAPPPVQSS-AAMGQQGYGTGQQPSPNTASYPPQGATQPSY- 523
G PS G G+ Q P +S A Q G G P+ SYP G Y
Sbjct: 157 SYPAGGSYPSAG--GNPNQYPGRGGTSPAGYPNQNPGAGSYPAGG--SYPSAGGNPNQYP 212
Query: 524 GVPPTSQSGYGSQVPPQSGY-AGYGMPQAQKPLANPPAY-GQTQQSPGS-------AGGY 574
G ++ GY +Q P Y AG P A NP Y G+ SPG AG Y
Sbjct: 213 GRGGSNPGGYPNQNPGAGSYPAGGSYPSAG---GNPNQYPGRGGSSPGGNPNQNPGAGTY 269
Query: 575 GQPGYSHSQPPPSSYAQPDSGSQRAPPSNYGAA 607
GY + P Y+ + G P Y A
Sbjct: 270 AGGGYPNQYPGGGGYSNQNPGRSGYSPGGYPGA 302
Score = 134 (52.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 69/211 (32%), Positives = 83/211 (39%)
Query: 420 GY-NQQGQGYAQDSYGGY--HAPQSG-Y--GQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
GY NQQ G S GY P +G Y G + PY + G +S GY N N + G
Sbjct: 65 GYPNQQYPGRGGSSPSGYPNQNPGAGSYPAGGSYPYPGRGG-SSPGGYPNQNPGA--GSY 121
Query: 474 PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPS----PNTASYPPQGATQPSY-GVPPT 528
PS G+ + P GY Q P P SYP G Y G T
Sbjct: 122 PSGGSYPSAGGNPNQYPGRGGYNPGGY-PNQNPGAGSYPAGGSYPSAGGNPNQYPGRGGT 180
Query: 529 SQSGYGSQVPPQSGY-AGYGMPQA-----QKPL---ANPPAYGQTQQSPGSAGGYGQPG- 578
S +GY +Q P Y AG P A Q P +NP Y Q+PG AG Y G
Sbjct: 181 SPAGYPNQNPGAGSYPAGGSYPSAGGNPNQYPGRGGSNPGGY--PNQNPG-AGSYPAGGS 237
Query: 579 YSHSQPPPSSYAQPDSGSQRAPPS-NYGAAT 608
Y + P+ Y S P+ N GA T
Sbjct: 238 YPSAGGNPNQYPGRGGSSPGGNPNQNPGAGT 268
Score = 130 (50.8 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 59/200 (29%), Positives = 73/200 (36%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHA----PQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEG 471
P GYN G G Y A P +G G Y + G S AGY N N + G
Sbjct: 138 PGRGGYNPGGYPNQNPGAGSYPAGGSYPSAG-GNPNQYPGRGG-TSPAGYPNQNPGA--G 193
Query: 472 HTP---SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY-GVPP 527
P SY + G + P S G G P SYP G Y G
Sbjct: 194 SYPAGGSYPSAGGNPNQYPGRGGSNPGGYPNQNPGAGSYPAGGSYPSAGGNPNQYPGRGG 253
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPS 587
+S G +Q P YAG G P P G + Q+PG +G Y GY P
Sbjct: 254 SSPGGNPNQNPGAGTYAGGGYPNQY-----PGGGGYSNQNPGRSG-YSPGGY----PGAG 303
Query: 588 SYAQPDSGSQRAPPSNYGAA 607
SY ++G P + +A
Sbjct: 304 SYPVRNAGQPGVYPGAHPSA 323
Score = 111 (44.1 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 30/89 (33%), Positives = 39/89 (43%)
Query: 285 KQLVNEVISENRIRNPAMAGGYSQQGYQARP--PTSWGTPGAPSMQQPGYGYVQPGAYPG 342
K V+E + + + G +Q Y +P P + PG P+ Q PG G P YP
Sbjct: 26 KGTVSETVPKKPPEKTSQ-GTKTQPNYPRQPSNPGAGSNPGYPNQQYPGRGGSSPSGYPN 84
Query: 343 QTPQYNMSQPPYGGYP----SQPTPGGYP 367
Q P S P G YP +PGGYP
Sbjct: 85 QNPGAG-SYPAGGSYPYPGRGGSSPGGYP 112
Score = 111 (44.1 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 27/66 (40%), Positives = 29/66 (43%)
Query: 304 GGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP-T 362
GG S GY + P + P S PG G PG YP Q P S P G YPS
Sbjct: 75 GGSSPSGYPNQNPGAGSYPAGGSYPYPGRGGSSPGGYPNQNPGAG-SYPSGGSYPSAGGN 133
Query: 363 PGGYPG 368
P YPG
Sbjct: 134 PNQYPG 139
Score = 59 (25.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 32/119 (26%), Positives = 43/119 (36%)
Query: 410 GYSYSQPPASG-YNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQ-----QQGYNSAAGYGN 463
GYS P +G Y + G G + + GY P +Q G G+G
Sbjct: 293 GYSPGGYPGAGSYPVRNAGQPGVYPGAHPSAGGGYPNWNPNNQILSPRYGGSFGGGGFGT 352
Query: 464 VNNT-SQE----GHTPSYGAQGDSTQAPPPVQSSAAMGQQ-GYGTGQQPSPNTASYPPQ 516
+ SQ G+ PS ++G +A A G GYG G PN PQ
Sbjct: 353 GGSPFSQSVKNMGYNPSAKSKGFGKKAVVAAGVGAMAGMAIGYGIGNFQRPNFQFRSPQ 411
Score = 57 (25.1 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 337 PGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPG 368
P P +T Q +QP Y PS P G PG
Sbjct: 34 PKKPPEKTSQGTKTQPNYPRQPSNPGAGSNPG 65
Score = 41 (19.5 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 5 PQYSSDGTPSKRKYEDQTTPPSAAA 29
P+ +S GT ++ Y Q + P A +
Sbjct: 38 PEKTSQGTKTQPNYPRQPSNPGAGS 62
>ZFIN|ZDB-GENE-050706-149 [details] [associations]
symbol:zgc:110045 "zgc:110045" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-050706-149
GO:GO:0003723 GeneTree:ENSGT00550000074311 EMBL:CR759794
eggNOG:NOG315872 HOGENOM:HOG000182823 HOVERGEN:HBG053520
OrthoDB:EOG46WZ8K EMBL:BC098540 IPI:IPI00629204
RefSeq:NP_001035073.1 UniGene:Dr.87947 SMR:Q4KMJ2
Ensembl:ENSDART00000079745 GeneID:664755 KEGG:dre:664755
OMA:QSCARIT NextBio:20902333 Uniprot:Q4KMJ2
Length = 222
Score = 182 (69.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 66/213 (30%), Positives = 103/213 (48%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ D +SP R
Sbjct: 8 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINIS-----DGSSPERI 61
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGK 238
V + G E I KA +I + E + ++ +T + + P ++ G +IGK
Sbjct: 62 VTITGASEVIFKAFAMIAEKFEEDIL--ASMINSTVTSRPPVT-LRLVFPASQCGSLIGK 118
Query: 239 GGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIR 298
GG IK ++ TGA++QV LP STER V I GT I + + V+ E+ +
Sbjct: 119 GGSKIKEIRESTGAQVQVAGDLLPD---STERAVTISGTPHAITQCVKHICTVMLESPPK 175
Query: 299 N--------PAMAGGYSQQGYQARPPTSWGTPG 323
P+ GG++ Q T++ PG
Sbjct: 176 GATIPYRPKPSAGGGHTVLT-QPHAATAFAIPG 207
>UNIPROTKB|F1MA60 [details] [associations]
symbol:Ewsr1 "Protein Ewsr1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1307258
GO:GO:0005634 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 IPI:IPI00764664 Ensembl:ENSRNOT00000057382
ArrayExpress:F1MA60 Uniprot:F1MA60
Length = 661
Score = 202 (76.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 76/212 (35%), Positives = 93/212 (43%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
GYS Y+ P GY Q Q Y Q SYG Y P Y Q Q S A G +
Sbjct: 17 GYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTD-----VSYTQAQ---STATXGQTAYAT 68
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSA-AMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPP 527
G P+ +G ST P A + QGYGTG + TA+ TQ SY
Sbjct: 69 SYGQPPT--VEGTSTGYTTPTAPQAYSQPVQGYGTGAYDT-TTATVT---TTQASYA--- 119
Query: 528 TSQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP--GY- 579
+QS YG+Q P Y YG P A P N PA +T Q S GGY QP GY
Sbjct: 120 -AQSAYGTQ--P--AYPAYGQQPAATAPTRPQDGNKPA--ETSQPQSSTGGYNQPSLGYG 172
Query: 580 --SHSQPP-PSSYA-QPDSGSQRAPPSNYGAA 607
++S P P SY QP + PP++Y ++
Sbjct: 173 QSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSS 204
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 68/212 (32%), Positives = 80/212 (37%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYG-GYHAPQSGYGQAAPYDQ--------QQGYNSAAGYG 462
SY QPP GY + Y P GYG A YD Q Y + + YG
Sbjct: 69 SYGQPPT--VEGTSTGYTTPTAPQAYSQPVQGYGTGA-YDTTTATVTTTQASYAAQSAYG 125
Query: 463 NVNNTSQEGHTPSYGA-----QGDS-TQAPPPVQSSAAMGQQ--GYGTGQQPSPNT-ASY 513
G P+ A G+ + P S+ Q GYG P SY
Sbjct: 126 TQPAYPAYGQQPAATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSY 185
Query: 514 PPQGATQP-SYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAG 572
P Q T P SY PPTS Y S P + Y Q P +YGQ QS
Sbjct: 186 PMQPVTAPPSY--PPTS---YSSSQPTSYDQSSYSQ---QNTYGQPSSYGQ--QS----- 230
Query: 573 GYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNY 604
YGQ S+ Q PP+SY P +GS PS Y
Sbjct: 231 SYGQQS-SYGQQPPTSYP-PQTGSYSQAPSQY 260
Score = 142 (55.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 82/309 (26%), Positives = 98/309 (31%)
Query: 307 SQQGYQA--RPPTSWGTPGAPSMQQPGYG-YVQPG--AYPGQTPQYNMSQPPYG-GYPSQ 360
+QQGY A PT + Q YG Y QP +Y Q Y Y
Sbjct: 14 AQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQSTATXGQTAYATSYGQP 73
Query: 361 PTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASG 420
PT G + Y +QP
Sbjct: 74 PTVEGTSTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG-TQPAYPA 132
Query: 421 YNQQGQGYAQDSYGGYHAPQSGYGQAA---PYDQQQGYNSAA-GYGNVNNTSQEGHTPSY 476
Y QQ A PQ G A P GYN + GYG +N S SY
Sbjct: 133 YGQQPAATAPTR------PQDGNKPAETSQPQSSTGGYNQPSLGYGQ-SNYSYPQVPGSY 185
Query: 477 GAQGDSTQAPP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYG 534
Q APP P S ++ Y NT P Q SYG QS YG
Sbjct: 186 PMQ--PVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYG----QQSSYG 239
Query: 535 SQ----VPPQSGYAGYGMPQAQKPLANPPAYGQT----QQSPGSAGGYGQPGYSHSQPPP 586
Q PPQ+G Y +Q + +YGQ Q P S G YGQ S P
Sbjct: 240 QQPPTSYPPQTG--SYSQAPSQYSQQSS-SYGQQSSFRQDHPSSMGVYGQESGGFSGPGE 296
Query: 587 S-SYAQPDS 594
+ S + PD+
Sbjct: 297 NRSLSGPDN 305
Score = 122 (48.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 50/180 (27%), Positives = 70/180 (38%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
S PP S + Q Y Q SY + Q+ YGQ + Y QQ Y + YG TS T
Sbjct: 195 SYPPTSYSSSQPTSYDQSSY----SQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQT 250
Query: 474 PSYGAQGDSTQAPPPV-QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG 532
SY +QAP Q S++ GQQ PS + Y + G S SG
Sbjct: 251 GSY------SQAPSQYSQQSSSYGQQSSFRQDHPS-SMGVYGQESGGFSGPG-ENRSLSG 302
Query: 533 YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQP 592
++ + G+ GM + + G+ G GG+ +PG + P P
Sbjct: 303 PDNRGRGRGGFDRGGMSRGGR------GGGRGGMGAGERGGFNKPGGPMDEGPDLDLGLP 356
Score = 68 (29.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 22/68 (32%), Positives = 26/68 (38%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAP-SMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPS 359
A A Y Q T + TP AP + QP GY GAY T +Q Y +
Sbjct: 65 AYATSYGQPPTVEGTSTGYTTPTAPQAYSQPVQGY-GTGAYDTTTATVTTTQASYAAQSA 123
Query: 360 QPTPGGYP 367
T YP
Sbjct: 124 YGTQPAYP 131
Score = 48 (22.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 4 EPQYSSDG--TPSKRKYEDQTTPPSAAARRPTG-FSAPDPAVAPTSYNSVPP 52
+PQ S+ G PS + + P P +AP P+ PTSY+S P
Sbjct: 156 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAP-PSYPPTSYSSSQP 206
>DICTYBASE|DDB_G0269160 [details] [associations]
symbol:nxnA "annexin VII" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0009617 "response to bacterium" evidence=IEP]
[GO:0010008 "endosome membrane" evidence=IDA] [GO:0006874 "cellular
calcium ion homeostasis" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005509 "calcium ion binding" evidence=IEA;ISS] [GO:0030587
"sorocarp development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005544
"calcium-dependent phospholipid binding" evidence=IEA;IDA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001464
InterPro:IPR018252 InterPro:IPR018502 Pfam:PF00191 PRINTS:PR00196
PROSITE:PS00223 SMART:SM00335 dictyBase:DDB_G0269160 GO:GO:0005886
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0009617 GO:GO:0005509 GO:GO:0010008
GO:GO:0030587 GO:GO:0006874 eggNOG:NOG267770 GO:GO:0005544
Gene3D:1.10.220.10 PANTHER:PTHR10502 SUPFAM:SSF47874 EMBL:X60269
EMBL:X60270 EMBL:M69022 PIR:S14723 RefSeq:XP_001134471.1
RefSeq:XP_646006.1 ProteinModelPortal:P24639
EnsemblProtists:DDB0232009 GeneID:8616954 KEGG:ddi:DDB_G0269160
OMA:EWLLNDV ProtClustDB:CLSZ2431375 Uniprot:P24639
Length = 462
Score = 199 (75.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 64/169 (37%), Positives = 67/169 (39%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
S PP GY Q YG APQ GY Y QQGY GY Q+G+
Sbjct: 2 SYPPNQGYPPQSNSPQPGQYG---APQQGYPPQQGYPPQQGYPPQQGY-----PPQQGYP 53
Query: 474 PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY 533
P G Q PP Q QQGY QQ P YPPQ P G PP Q GY
Sbjct: 54 PQQGYPPQ--QGYPPQQGYPP--QQGYPP-QQGYPPQQGYPPQQGYPPQQGYPP--QQGY 106
Query: 534 GSQ--VPPQSGYAGYGMPQAQK-PLANPPAYGQTQQSPGSAGGYGQPGY 579
Q PPQ GY G P Q P P +PG GY Q GY
Sbjct: 107 PPQQGYPPQQGYPPQGYPPQQGYPPVGVPVGVPVGFAPGMVVGYHQ-GY 154
Score = 145 (56.1 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 48/129 (37%), Positives = 49/129 (37%)
Query: 484 QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ--VPPQS 541
Q PP +S GQ YG QQ P YPPQ P G PP Q GY Q PPQ
Sbjct: 7 QGYPPQSNSPQPGQ--YGAPQQGYPPQQGYPPQQGYPPQQGYPP--QQGYPPQQGYPPQQ 62
Query: 542 GYA---GYGMPQAQKPLAN-PPAYGQTQQS--PGSAGGYGQPGYSHSQPPPSSYAQPDSG 595
GY GY Q P PP G Q P G Q GY Q P P G
Sbjct: 63 GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQG 122
Query: 596 ---SQRAPP 601
Q PP
Sbjct: 123 YPPQQGYPP 131
Score = 120 (47.3 bits), Expect = 0.00053, P = 0.00053
Identities = 45/121 (37%), Positives = 45/121 (37%)
Query: 498 QGYGTGQQPSPNTASY-PPQGATQPSYGVPPTSQSGYGSQ--VPPQSGYA---GYGMPQA 551
QGY Q SP Y PQ P G PP Q GY Q PPQ GY GY Q
Sbjct: 7 QGYPP-QSNSPQPGQYGAPQQGYPPQQGYPP--QQGYPPQQGYPPQQGYPPQQGYPPQQG 63
Query: 552 QKPLAN-PPAYGQTQQS--PGSAGGYGQPGYSHSQ--PPPSSYAQPDSG---SQRAPPSN 603
P PP G Q P G Q GY Q PP Y P G Q PP
Sbjct: 64 YPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYP-PQQGYPPQQGYPPQG 122
Query: 604 Y 604
Y
Sbjct: 123 Y 123
>DICTYBASE|DDB_G0277797 [details] [associations]
symbol:sec24l "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0030127 "COPII vesicle
coat" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
dictyBase:DDB_G0277797 GO:GO:0006886 GO:GO:0008270
GenomeReviews:CM000151_GR EMBL:AAFI02000022 GO:GO:0006888
GO:GO:0030127 SUPFAM:SSF82919 InterPro:IPR012990 Pfam:PF08033
SUPFAM:SSF81811 eggNOG:COG5028 KO:K14007 RefSeq:XP_642481.2
ProteinModelPortal:Q54Z72 STRING:Q54Z72 PRIDE:Q54Z72
EnsemblProtists:DDB0235166 GeneID:8621192 KEGG:ddi:DDB_G0277797
OMA:NCKVAII Uniprot:Q54Z72
Length = 1133
Score = 204 (76.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 92/311 (29%), Positives = 110/311 (35%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGY---GYVQPGAYPGQTPQYNMSQPPYGGYPSQP 361
GY QQ Q P + G G P QQ + GY Q G YP Q PQ Q GGYP QP
Sbjct: 12 GYPQQQQQGYPQQNQG--GYPQQQQQQHQRGGYPQQG-YP-QQPQ-GYPQQNQGGYPQQP 66
Query: 362 TPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGY 421
Y + G YSQPP +
Sbjct: 67 QTQQY-NPYSQQTSPPTTTNSAPPTTNSAPLNPSVQQTSPPQSMTNNTGV-YSQPPPTNQ 124
Query: 422 NQ---QGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGA 478
Q + Q ++ GGY QS P QQQ Y GY SQ+ T S +
Sbjct: 125 QQSPSKSQPINNNNMGGY-PQQSSQSSPPPTSQQQQYQG--GYPQQTGYSQQPQTNSLSS 181
Query: 479 QGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVP 538
TQ PPP+ ++ + Q G Q P P T + Q T S PP + Y P
Sbjct: 182 P---TQPPPPITNNTSAPPQPTGYSQPP-PMTNNTGYQQTTNTSQ--PP--MNNYQQYSP 233
Query: 539 PQ-SGYAGYGMPQAQKPLA--NPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSG 595
Q SG Y PQ+Q+ P Y QQ P QP Y Q Q
Sbjct: 234 NQPSGGNMYQQPQSQQSQQPQQPQQYQYNQQPPQ------QP-YGQQQQQQQQQQQQQQQ 286
Query: 596 SQRAPPSN-YG 605
Q+ PP YG
Sbjct: 287 QQQQPPQQPYG 297
Score = 177 (67.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 70/200 (35%), Positives = 83/200 (41%)
Query: 411 YSYSQPPASGY-NQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGY-NSAAGYGNVNNTS 468
Y Q SGY QQ QGY Q + GGY Q Q Y QQ GY GY N
Sbjct: 3 YPNQQQEQSGYPQQQQQGYPQQNQGGYPQQQQQQHQRGGYPQQ-GYPQQPQGYPQQNQGG 61
Query: 469 --QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGV- 525
Q+ T Y T +PP +SA PS S PPQ T + GV
Sbjct: 62 YPQQPQTQQYNPYSQQT-SPPTTTNSAPPTTNS--APLNPSVQQTS-PPQSMTNNT-GVY 116
Query: 526 ---PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP-GYSH 581
PPT+Q S+ P + G PQ Q ++PP Q QQ G GY Q GYS
Sbjct: 117 SQPPPTNQQQSPSKSQPINNNNMGGYPQ-QSSQSSPPPTSQQQQYQG---GYPQQTGYSQ 172
Query: 582 SQPPPSSYAQPDSGSQRAPP 601
QP +S + P +Q PP
Sbjct: 173 -QPQTNSLSSP---TQPPPP 188
Score = 123 (48.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 54/192 (28%), Positives = 68/192 (35%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAP----YDQQQGYNSAAGYGNVNN 466
Y P +GY+QQ Q + S P + A P Y Q + GY N
Sbjct: 160 YQGGYPQQTGYSQQPQTNSLSSPTQPPPPITNNTSAPPQPTGYSQPPPMTNNTGYQQTTN 219
Query: 467 TSQ------EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ 520
TSQ + ++P+ + G+ Q P QS Q Y QQP P P G Q
Sbjct: 220 TSQPPMNNYQQYSPNQPSGGNMYQQPQSQQSQQPQQPQQYQYNQQP-PQQ----PYGQQQ 274
Query: 521 PSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS 580
Q Q PPQ Y PQ Q+ + P G S G QP
Sbjct: 275 QQQQQQQQQQQQQQQQ-PPQQPYGQ--QPQQQQQWNSNPVPGLQNLSLGPNNQ--QPQQQ 329
Query: 581 HSQPPPSSYAQP 592
+ QP Y QP
Sbjct: 330 YGQPQQQQYGQP 341
Score = 112 (44.5 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 53/201 (26%), Positives = 69/201 (34%)
Query: 412 SYSQPPASGYNQQGQG-YAQDSYGGY-HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
S S PP + QQ QG Y Q + GY PQ+ + N+ + SQ
Sbjct: 147 SQSSPPPTSQQQQYQGGYPQQT--GYSQQPQTNSLSSPTQPPPPITNNTSAPPQPTGYSQ 204
Query: 470 EGH-TPSYGAQGDSTQAPPPVQS--SAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
T + G Q + + PP+ + + Q G Q + S PQ Q Y
Sbjct: 205 PPPMTNNTGYQQTTNTSQPPMNNYQQYSPNQPSGGNMYQQPQSQQSQQPQQPQQYQYNQQ 264
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSH----- 581
P Q YG Q Q Q Q+P P YGQ Q PG +
Sbjct: 265 PPQQP-YGQQQQQQQQQQQQQQQQQQQPPQQP--YGQQPQQQQQWNSNPVPGLQNLSLGP 321
Query: 582 -SQPPPSSYAQPDSGSQRAPP 601
+Q P Y QP PP
Sbjct: 322 NNQQPQQQYGQPQQQQYGQPP 342
Score = 94 (38.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 54/207 (26%), Positives = 62/207 (29%)
Query: 414 SQPPASGYNQQGQGYAQDSYGG-YHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGH 472
SQPP + Y Q Q S G Y PQS Q QQ YN Q+
Sbjct: 221 SQPPMNNYQQYSPN--QPSGGNMYQQPQSQQSQQPQQPQQYQYNQQPPQQPYGQQQQQQQ 278
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGAT-QPSYGVPPTSQS 531
Q Q P QQ + + P S P Q YG P Q
Sbjct: 279 QQQQQQQQQQQQPPQQPYGQQPQQQQQWNSNPVPGLQNLSLGPNNQQPQQQYGQPQQQQ- 337
Query: 532 GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQ------------SPGSA----GGYG 575
YG PP G Q +P P QQ SP + Y
Sbjct: 338 -YGQ--PPFVGQQQQQQQQPWQP-QQPQQQPNQQQIEDNRINMSKVPSPTAILEQFNNYI 393
Query: 576 QPGYSHSQPPPSSYAQPDSGSQRAPPS 602
S PPPS+ Q Q A P+
Sbjct: 394 YKTNSDVSPPPSTVQQLVIDQQNASPN 420
Score = 81 (33.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 26/62 (41%), Positives = 27/62 (43%)
Query: 304 GGYSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGAYPGQ--TPQYNMSQPPYGGYPSQ 360
GGY QQ Q + G P QQP GY G YP Q T QYN PY S
Sbjct: 27 GGYPQQQQQQHQRGGYPQQGYP--QQPQGYPQQNQGGYPQQPQTQQYN----PYSQQTSP 80
Query: 361 PT 362
PT
Sbjct: 81 PT 82
Score = 59 (25.8 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 34/134 (25%), Positives = 54/134 (40%)
Query: 5 PQYSSDGTPSKRK------YEDQTTPPSAA-ARRPTGFSAP-DPAVAPTS-----YN--- 48
PQ + G P + + Y QT+PP+ + PT SAP +P+V TS N
Sbjct: 55 PQQNQGGYPQQPQTQQYNPYSQQTSPPTTTNSAPPTTNSAPLNPSVQQTSPPQSMTNNTG 114
Query: 49 --SVPPPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRP--RVENGSGGFDSADKGFSSP 104
S PPP ++ Q ++ S + P + + GG+ G+S
Sbjct: 115 VYSQPPPTNQQQSPSKSQPINNNNMGGYPQQSSQSSPPPTSQQQQYQGGYPQ-QTGYSQQ 173
Query: 105 PSDLKSIPAPSAIP 118
P S+ +P+ P
Sbjct: 174 PQT-NSLSSPTQPP 186
>ZFIN|ZDB-GENE-041221-3 [details] [associations]
symbol:prnprs3 "prion protein, related sequence 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005544 "calcium-dependent phospholipid binding"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0048854
"brain morphogenesis" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0007156 "homophilic cell adhesion" evidence=IDA]
[GO:0021731 "trigeminal motor nucleus development" evidence=IMP]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
InterPro:IPR001464 InterPro:IPR022416 ZFIN:ZDB-GENE-041221-3
GO:GO:0005886 GO:GO:0042981 GO:GO:0051260 GO:GO:0005509
GO:GO:0007156 GO:GO:0005544 PANTHER:PTHR10502 GO:GO:0048854
Gene3D:1.10.790.10 SUPFAM:SSF54098 HOVERGEN:HBG056090 EMBL:AJ620614
IPI:IPI00679275 RefSeq:NP_001013316.1 UniGene:Dr.162496
UniGene:Dr.84038 ProteinModelPortal:Q5K4F8 GeneID:503702
KEGG:dre:503702 CTD:503702 InParanoid:Q5K4F8 NextBio:20866258
ArrayExpress:Q5K4F8 GO:GO:0021731 Uniprot:Q5K4F8
Length = 567
Score = 163 (62.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 66/193 (34%), Positives = 77/193 (39%)
Query: 414 SQPPASGYNQQGQGY-AQDSY---GGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
S P +GY QG GY AQ Y GGY A Q GY Y Q GY + GY N +
Sbjct: 117 SYPGRAGYPNQG-GYPAQGGYPAQGGYPA-QGGYPAQGGYPAQGGYPAQGGYPQGNYPGR 174
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYP-PQGATQPSYGVPP- 527
G+ P G G Q P +S G G G P+ P P G + P Y V
Sbjct: 175 SGY-PGQG--GYPAQGGYPGGAS----YPGAGAGSYPNRYPGGNPYPVGGSYPGYPVRGG 227
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPS 587
+S + +G V GY G AQ P NP SP G YG GY P
Sbjct: 228 SSPNQFGGGVGGAGGYPG----AAQYPNWNP---NNKIMSPAYGGNYGGYGYGGRSP--- 277
Query: 588 SYAQPDSGSQRAP 600
+AQ G AP
Sbjct: 278 -FAQSVQGMGMAP 289
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 56/207 (27%), Positives = 76/207 (36%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G+ + + +S + +G G + + GG + S + + S Y
Sbjct: 28 GFGWGKTSSS--SNKG-GSSSGNKGGSSSSSSSSSSSKGTSSHGTHTSPGNYPRQPQVPN 84
Query: 470 EGHTPSYGAQGDST-QAP-PPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPP 527
+ P GA G Q PP S+ QG G+ PN YP QG P+ G P
Sbjct: 85 QNPPPYPGAGGGYPGQGRYPPAGSNPGYPNQGSYPGRAGYPNQGGYPAQGG-YPAQGGYP 143
Query: 528 TSQSGYGSQ--VPPQSGY-AGYGMPQAQKP-LANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
+Q GY +Q P Q GY A G PQ P + P G G GG PG
Sbjct: 144 -AQGGYPAQGGYPAQGGYPAQGGYPQGNYPGRSGYPGQGGYPAQGGYPGGASYPGAGAGS 202
Query: 584 PP---PSSYAQPDSGSQRAPPSNYGAA 607
P P P GS P G++
Sbjct: 203 YPNRYPGGNPYPVGGSYPGYPVRGGSS 229
Score = 106 (42.4 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 31/80 (38%), Positives = 37/80 (46%)
Query: 290 EVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSM-QQPGY-GYVQPGAYPGQTPQY 347
+V ++N P GGY QG R P + PG P+ PG GY G YP Q
Sbjct: 81 QVPNQNPPPYPGAGGGYPGQG---RYPPAGSNPGYPNQGSYPGRAGYPNQGGYPAQG--- 134
Query: 348 NMSQPPYGGYPSQPTPGGYP 367
P GGYP+Q GGYP
Sbjct: 135 --GYPAQGGYPAQ---GGYP 149
Score = 101 (40.6 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 31/76 (40%), Positives = 33/76 (43%)
Query: 300 PAMAGGYSQQGYQARP--PTSWGTPGAPSMQQPGYGYVQPGAYPGQT--PQYNMSQPPYG 355
P AG +Q GY A+ P G P G GY G YP Q PQ N P
Sbjct: 119 PGRAGYPNQGGYPAQGGYPAQGGYPAQGGYPAQG-GYPAQGGYPAQGGYPQGNY--PGRS 175
Query: 356 GYPSQ---PTPGGYPG 368
GYP Q P GGYPG
Sbjct: 176 GYPGQGGYPAQGGYPG 191
Score = 91 (37.1 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 52/186 (27%), Positives = 63/186 (33%)
Query: 420 GYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYN---SAA--------GYGNVNNTS 468
GY +G G + + +GG GY AA Y N S A GYG + +
Sbjct: 221 GYPVRG-GSSPNQFGGGVGGAGGYPGAAQYPNWNPNNKIMSPAYGGNYGGYGYGGRSPFA 279
Query: 469 QE----GHTPSYGAQGDSTQAPPPVQSSAAMGQQ-GYGTGQQPSPNTASYPPQGATQPSY 523
Q G PSY ++G QA + A G GYG G P P + PQ Y
Sbjct: 280 QSVQGMGMAPSYKSKGFGKQAIIAAGAGAVAGMALGYGLGSFPRPRFHFHNPQ----EEY 335
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
YG Q PP G Q P G + G P
Sbjct: 336 YYNHYMYRRYG-QTPPDGNMNGNTNSQGGIP-------GDAGSASAGQGNLN-PHEIFQN 386
Query: 584 PPPSSY 589
PPP SY
Sbjct: 387 PPPQSY 392
Score = 82 (33.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 23/64 (35%), Positives = 25/64 (39%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPG 364
G S G P P P+ P Y G YPGQ +Y PP G P P G
Sbjct: 63 GTSSHGTHTSPGNYPRQPQVPNQNPPPYPGAG-GGYPGQG-RY----PPAGSNPGYPNQG 116
Query: 365 GYPG 368
YPG
Sbjct: 117 SYPG 120
Score = 82 (33.9 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 61/218 (27%), Positives = 75/218 (34%)
Query: 410 GYSYSQPPA-SGYNQQGQGY-AQDSY-GGYHAPQSGYGQAAP-YDQQQGY---NSAAGY- 461
GY P SGY QG GY AQ Y GG P +G G Y Y S GY
Sbjct: 165 GYPQGNYPGRSGYPGQG-GYPAQGGYPGGASYPGAGAGSYPNRYPGGNPYPVGGSYPGYP 223
Query: 462 --GNVNNTSQEGHTPSYGAQGDSTQAP---P--PVQSSAAMGQQG-YGTGQQPSPNTASY 513
G + G G + Q P P + S A G G YG G + SP S
Sbjct: 224 VRGGSSPNQFGGGVGGAGGYPGAAQYPNWNPNNKIMSPAYGGNYGGYGYGGR-SPFAQSV 282
Query: 514 PPQGATQPSYGVPPTSQSGYGSQVPPQSG---YAGYGMPQAQKPLANPPAYGQTQQSPGS 570
G PSY G+G Q +G AG + P + Q
Sbjct: 283 QGMGMA-PSY-----KSKGFGKQAIIAAGAGAVAGMALGYGLGSFPRPRFHFHNPQEEYY 336
Query: 571 AGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYGAAT 608
Y Y Q PP ++ SQ P + G+A+
Sbjct: 337 YNHYMYRRYG--QTPPDGNMNGNTNSQGGIPGDAGSAS 372
Score = 46 (21.3 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 89 NGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGT-SKKIEIPN 137
+ GG S +KG SS S S ++ S+G + S G ++ ++PN
Sbjct: 38 SNKGGSSSGNKGGSSSSSSSSSSSKGTS---SHGTHTSPGNYPRQPQVPN 84
>UNIPROTKB|H9L011 [details] [associations]
symbol:LOC426023 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311
EMBL:AADN02056329 Ensembl:ENSGALT00000021744 OMA:RALENKI
Uniprot:H9L011
Length = 195
Score = 174 (66.3 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 52/149 (34%), Positives = 75/149 (50%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
LP STER + I G + I E KQ+
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQI 162
>FB|FBgn0261885 [details] [associations]
symbol:osa "osa" species:7227 "Drosophila melanogaster"
[GO:0046530 "photoreceptor cell differentiation" evidence=IMP]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IMP] [GO:0008587 "imaginal disc-derived
wing margin morphogenesis" evidence=IMP] [GO:0007379 "segment
specification" evidence=IMP] [GO:0003677 "DNA binding"
evidence=ISS;IDA;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA;IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0003713 "transcription coactivator
activity" evidence=IC] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0048190 "wing disc dorsal/ventral
pattern formation" evidence=IGI] [GO:0042058 "regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
EMBL:AE014297 GO:GO:0048190 GO:GO:0045893 GO:GO:0016055
GO:GO:0003677 GO:GO:0008586 GO:GO:0006351 GO:GO:0016568
eggNOG:NOG12793 GO:GO:0007379 GO:GO:0007480 KO:K11653
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 GO:GO:0046530 GO:GO:0008587
GO:GO:0035060 GO:GO:0042058 EMBL:AF053091 PIR:T13049
RefSeq:NP_001163639.1 RefSeq:NP_524392.2 RefSeq:NP_732263.1
UniGene:Dm.2989 ProteinModelPortal:Q8IN94 SMR:Q8IN94 DIP:DIP-20699N
IntAct:Q8IN94 MINT:MINT-297379 STRING:Q8IN94 PaxDb:Q8IN94
PRIDE:Q8IN94 EnsemblMetazoa:FBtr0089581 EnsemblMetazoa:FBtr0301487
GeneID:42130 KEGG:dme:Dmel_CG7467 CTD:42130 FlyBase:FBgn0261885
InParanoid:Q8IN94 OMA:SQMGQGP OrthoDB:EOG4MCVF9 PhylomeDB:Q8IN94
ChiTaRS:osa GenomeRNAi:42130 NextBio:827314 Bgee:Q8IN94
GermOnline:CG7467 Uniprot:Q8IN94
Length = 2716
Score = 164 (62.8 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 69/198 (34%), Positives = 77/198 (38%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAP---QSGYGQAAPYDQQQGYNSAAG--Y--GNVNNTS 468
PP QQGQ S GG P Q G GQ P QQ AAG Y G +
Sbjct: 1294 PPQQQQGQQGQ-QPPPSVGGGPPPAPQQHGPGQVPPSPQQH-VRPAAGAPYPPGGSGYPT 1351
Query: 469 QEGHTP---------SYGAQGDSTQAPPPVQSSAAMGQQ-GYGTGQQPSPNTASYPPQGA 518
TP +YG G S Q ++ GQ G G GQ P N YPP G
Sbjct: 1352 PVSRTPGSPYPSQPGAYGQYGSSDQ----YNATGPPGQPFGQGPGQYPPQNRNMYPPYG- 1406
Query: 519 TQPSYGVPPT--SQSG-YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYG 575
P PPT +Q G YGS+ P G P Q PPA G P SA G
Sbjct: 1407 --PEGEAPPTGANQYGPYGSR-PYSQPPPGGPQPPTQTVAGGPPAGGAPGAPPSSAYPTG 1463
Query: 576 QPGYS-HSQPPPSSYAQP 592
+P + QPPP QP
Sbjct: 1464 RPSQQDYYQPPPDQSPQP 1481
Score = 160 (61.4 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 57/197 (28%), Positives = 73/197 (37%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAA-PYDQQQGYNSAAGYGNVNNTSQEGHTP 474
PP G+ + YGG Q G+ PY Q G + NTS+ G +P
Sbjct: 259 PPPPGHGPPPPQHQPSPYGGQ---QGGWAPPPRPYSPQLGPSQQYRTPPPTNTSR-GQSP 314
Query: 475 SYGAQGDSTQAPP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ--PSYGVPPTSQ 530
A G ++ + P P Q QQ GQQP PP G Q P PPTSQ
Sbjct: 315 YPPAHGQNSGSYPSSPQQQQQQQQQQQQQAGQQPGGPVPGGPPPGTGQQPPQQNTPPTSQ 374
Query: 531 -SGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSY 589
S Y + P G G + + Y + + P G PG H PP S +
Sbjct: 375 YSPYPQRYPTPPGLPAGG--SNHRTAYSTHQYPEPNR-PWPGGSSPSPGSGHPLPPASPH 431
Query: 590 AQPDSGSQRAPPSNYGA 606
P Q PP + A
Sbjct: 432 HVPPLQQQPPPPPHVSA 448
Score = 133 (51.9 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 58/205 (28%), Positives = 73/205 (35%)
Query: 416 PPASGYN--QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ--QGYNSAAGYGNVNNTSQEG 471
PP S + QQ G Q + + P G P QQ QG G + +
Sbjct: 1262 PPHSPHTAAQQAAGQHQQQHPQHQHPGLP-GPPPPQQQQGQQGQQPPPSVGGGPPPAPQQ 1320
Query: 472 HTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGV------ 525
H P P + G GY T +P + YP Q YG
Sbjct: 1321 HGPGQVPPSPQQHVRPAAGAPYPPGGSGYPTPVSRTPGSP-YPSQPGAYGQYGSSDQYNA 1379
Query: 526 --PPTSQSGYG-SQVPPQSG--YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS 580
PP G G Q PPQ+ Y YG P+ + P P G Q P + Y QP
Sbjct: 1380 TGPPGQPFGQGPGQYPPQNRNMYPPYG-PEGEAP----PT-GANQYGPYGSRPYSQPPPG 1433
Query: 581 HSQPPPSSYA--QPDSGSQRAPPSN 603
QPP + A P G+ APPS+
Sbjct: 1434 GPQPPTQTVAGGPPAGGAPGAPPSS 1458
Score = 130 (50.8 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 68/216 (31%), Positives = 82/216 (37%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP +QQ Q + + ++PQ A P QG N+ A T P
Sbjct: 571 PPQQQQSQQQQA-SNSASSASNSPQQTPPPAPP--PNQGMNNMA-------TPPP---PP 617
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ--PSPNTASYPPQG-ATQPSY--GV----- 525
GA G PP + MG G G Q P YPP +P Y G
Sbjct: 618 QGAAGGGYPMPPHMHGGYKMGGPGQSPGAQGYPPQQPQQYPPGNYPPRPQYPPGAYATGP 677
Query: 526 --PPTSQSGYG--SQVPPQS---GYAGYGMPQ--AQKPLAN--PPAYGQTQQSPGSAGGY 574
PPTSQ+G G + +P + GY G GMP Q P PP+ QT PG A G
Sbjct: 678 PPPPTSQAGAGGANSMPSGAQAGGYPGRGMPNHTGQYPPYQWVPPSPQQTV--PGGAPGG 735
Query: 575 GQPGYSHSQ----PPPSSYA--QPDSGSQRAPPSNY 604
G +H Q PPP P GS P NY
Sbjct: 736 AMVG-NHVQGKGTPPPPVVGGPPPPQGSGSPRPLNY 770
Score = 128 (50.1 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 64/212 (30%), Positives = 73/212 (34%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYG--NVNNTSQEGH- 472
PP+S Q S Q GQ + G +S G G N Q
Sbjct: 452 PPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRP 511
Query: 473 TPS-YGAQGDSTQAPPPVQ----SSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY-GVP 526
TPS G+ G + +P Q S A Q G Q P A PP P G P
Sbjct: 512 TPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPPVGAGGPPPMPPHPGMPGGP 571
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQ----TQQSP--GSAGG-YGQP-- 577
P Q Q + A PQ P A PP G T P G+AGG Y P
Sbjct: 572 PQQQQSQQQQASNSASSAS-NSPQQTPPPAPPPNQGMNNMATPPPPPQGAAGGGYPMPPH 630
Query: 578 ---GYSHSQPPPSSYAQ--PDSGSQRAPPSNY 604
GY P S AQ P Q+ PP NY
Sbjct: 631 MHGGYKMGGPGQSPGAQGYPPQQPQQYPPGNY 662
Score = 127 (49.8 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 59/179 (32%), Positives = 69/179 (38%)
Query: 437 HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPP-VQSSAAM 495
H+P + QAA QQQ + + G P QG Q PPP V
Sbjct: 1264 HSPHTAAQQAAGQHQQQ-------HPQHQHPGLPGPPPPQQQQGQQGQQPPPSVGGGPPP 1316
Query: 496 GQQGYGTGQ-QPSPNTASYPPQGATQP--SYGVP-PTSQSGYGSQVPPQSG-YAGYGMPQ 550
Q +G GQ PSP P GA P G P P S++ GS P Q G Y YG
Sbjct: 1317 APQQHGPGQVPPSPQQHVRPAAGAPYPPGGSGYPTPVSRTP-GSPYPSQPGAYGQYGSSD 1375
Query: 551 AQKPLANPPAYGQT-QQSPGSAGGYGQPGYSHSQPP--PSSYAQPDSGSQRAPPSNYGA 606
Q PP GQ Q PG Y P + PP P A P +Q P YG+
Sbjct: 1376 -QYNATGPP--GQPFGQGPGQ---Y-PPQNRNMYPPYGPEGEAPPTGANQYGP---YGS 1424
Score = 121 (47.7 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 63/210 (30%), Positives = 69/210 (32%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
Y Q P QQ Q Q Y GQ P Q G + +
Sbjct: 1561 YPPQQGPPPPPQQQQQPQQQQQQPPYQQVAGPPGQQPPQAPPQWAQMNPGQTAQSGIAPP 1620
Query: 471 G---HTPSY-GAQGDSTQAPPPVQSSAAMG------QQGYGTGQQPSPNTASYPPQGATQ 520
G PS G Q P Q S G Q G PSP P G +
Sbjct: 1621 GSPLRPPSGPGQQNRMPGMPAQQQQSQQQGGVPQPPPQQASHGGVPSPGLPQVGPGGMVK 1680
Query: 521 PSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQT-QQSPGSAGGYGQPGY 579
P Y +PP G G QV G G GM +QKP PP GQ QQ P QP
Sbjct: 1681 PPYAMPPPPSQGVGQQVG--QGPPG-GM-MSQKP---PPMPGQAMQQQPLQQ----QPP- 1728
Query: 580 SHSQPPPSSYAQPDSGSQRAP----PSNYG 605
SH P P + Q Q P P YG
Sbjct: 1729 SHQHPHPHQHPQHQHPHQMPPNQTAPGGYG 1758
Score = 117 (46.2 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 62/196 (31%), Positives = 69/196 (35%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTP- 474
PP Q G A GG AP+ G Y + YG + + P
Sbjct: 106 PPHMQQQQHHGGPAPPPPGG--APEHAPGVKEEYTHLPPPHPHPAYGRYH--ADPNMDPY 161
Query: 475 SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPN-TASYPPQGAT---QPSYGVPPTSQ 530
YG + PP Q QQ QQP P + + PPQ QP G PT
Sbjct: 162 RYGQPLPGGK--PPQQQQPHPQQQ---PPQQPGPGGSPNRPPQQRYIPGQPPQGPTPTLN 216
Query: 531 SGYGSQ---VPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPS 587
S S PPQ YA PQ A A Q QQ AGG PG H PPP
Sbjct: 217 SLLQSSNPPPPPQHRYANTYDPQQAAASAAAAAAAQQQQ----AGGPPPPG--HGPPPPQ 270
Query: 588 SYAQPDSGSQR--APP 601
P G Q APP
Sbjct: 271 HQPSPYGGQQGGWAPP 286
Score = 107 (42.7 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 70/221 (31%), Positives = 82/221 (37%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEG 471
S+ PP S N A D Y GY S Y A+ Q Y + AG +
Sbjct: 1142 SFPAPPGSAPNA-----AIDGYPGYPGG-SPYPVAS--GPQPDY-ATAGQMQRPPSQNNP 1192
Query: 472 HTPSYGAQ-----GDSTQAPPPVQSS-AAMGQQGYGTG----QQPSPNTASYPPQGATQP 521
TP GA GD+ P + AA G G GTG Q P P AS GA
Sbjct: 1193 QTPHPGAAAAVAAGDNISVSNPFEDPIAAGGGPGSGTGPGPGQGPGPGAAS-GGAGAVGA 1251
Query: 522 SYGVP-PTSQSGYGSQVPPQ--SGYAGYGMPQAQKP-LANPPA----YGQT-QQSPGSAG 572
G P P + Q +G PQ Q P L PP GQ QQ P S G
Sbjct: 1252 VGGGPQPHPPPPHSPHTAAQQAAGQHQQQHPQHQHPGLPGPPPPQQQQGQQGQQPPPSVG 1311
Query: 573 GYGQPG-YSHS--QPPPS--SYAQPDSGSQRAPPSNYGAAT 608
G P H Q PPS + +P +G+ PP G T
Sbjct: 1312 GGPPPAPQQHGPGQVPPSPQQHVRPAAGAPY-PPGGSGYPT 1351
Score = 103 (41.3 bits), Expect = 0.00094, Sum P(4) = 0.00094
Identities = 60/211 (28%), Positives = 70/211 (33%)
Query: 410 GYSYSQP---PASGYNQQGQGYAQDSYG-GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVN 465
GY QP P Y + Q Y +Y G P + A + A GY
Sbjct: 648 GYPPQQPQQYPPGNYPPRPQ-YPPGAYATGPPPPPTSQAGAGGANSMPSGAQAGGYPGRG 706
Query: 466 NTSQEGHTPSYGAQGDSTQAPPP--VQSSAAMGQQGYGTGQQPSPNTASYPP-QGATQP- 521
+ G P Y S Q P A +G G G P P PP QG+ P
Sbjct: 707 MPNHTGQYPPYQWVPPSPQQTVPGGAPGGAMVGNHVQGKGTPPPPVVGGPPPPQGSGSPR 766
Query: 522 --SYGVPPTS-QSGYG-SQVPPQSGYAGYGM-PQAQKPLANPPAYGQTQQSPGSAGGYGQ 576
+Y + GYG S PPQ G GYG P P P P G
Sbjct: 767 PLNYLKQHLQHKGGYGGSPTPPQ-GPQGYGNGPTGMHP-GMPMGPPHHMGPPHGPTNMGP 824
Query: 577 PGYSHSQPPPSSYAQPDSGSQRAPPSNYGAA 607
P S PP S Q G Q P GA+
Sbjct: 825 PT---STPPQSQMLQ---GGQ---PQGQGAS 846
Score = 99 (39.9 bits), Expect = 0.00079, Sum P(4) = 0.00079
Identities = 56/195 (28%), Positives = 65/195 (33%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYD------QQQGYNSAAGYGNVNNT 467
SQ A G N G Y G P GQ PY QQ A G V N
Sbjct: 683 SQAGAGGANSMPSGAQAGGYPGRGMPNHT-GQYPPYQWVPPSPQQTVPGGAPGGAMVGNH 741
Query: 468 SQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGY---------GTGQQPSPNTASYPPQGA 518
Q TP G PPP Q S + Y G G P+P PQG
Sbjct: 742 VQGKGTPPPPVVG----GPPPPQGSGSPRPLNYLKQHLQHKGGYGGSPTPPQG---PQGY 794
Query: 519 TQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
G+ P G + P G G P + P + GQ Q G++GG G
Sbjct: 795 GNGPTGMHPGMPMGPPHHMGPPHGPTNMGPPTSTPPQSQMLQGGQPQ-GQGASGGPESGG 853
Query: 579 YSH-SQPPPSSYAQP 592
H SQ S + P
Sbjct: 854 PEHISQDNGISSSGP 868
Score = 95 (38.5 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 60/208 (28%), Positives = 72/208 (34%)
Query: 413 YSQPPASGYNQQGQGYAQDS-YGGYHA--PQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
YSQPP G Q A GG P S Y P QQ Y
Sbjct: 1427 YSQPPPGGPQPPTQTVAGGPPAGGAPGAPPSSAYPTGRP-SQQDYYQPPPDQSPQPRRHP 1485
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSP---NTASYPPQGATQPS---Y 523
+ S G + A P + + G Q Y SP N PP+GA P +
Sbjct: 1486 DFIKDSQPYPGYN--ARPQIYGAWQSGTQQYRPQYPSSPAPQNWGGAPPRGAAPPPGAPH 1543
Query: 524 GVPPTSQSGYGS----QVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
G P +G + PPQ G PQ Q+ P Q QQ P G PG
Sbjct: 1544 GPPIQQPAGVAQWDQHRYPPQQGPPP--PPQQQQ---QPQ---QQQQQPPYQQVAGPPGQ 1595
Query: 580 SHSQPPPSSYAQPDSG----SQRAPPSN 603
Q PP +AQ + G S APP +
Sbjct: 1596 QPPQAPPQ-WAQMNPGQTAQSGIAPPGS 1622
Score = 92 (37.4 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 29/74 (39%), Positives = 34/74 (45%)
Query: 294 ENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP 353
+ +R PA Y G P S TPG+P QPG Y G Y G + QYN + PP
Sbjct: 1331 QQHVR-PAAGAPYPPGGSGYPTPVS-RTPGSPYPSQPG-AY---GQY-GSSDQYNATGPP 1383
Query: 354 YGGYPSQPTPGGYP 367
G P PG YP
Sbjct: 1384 --GQPFGQGPGQYP 1395
Score = 89 (36.4 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 27/59 (45%), Positives = 29/59 (49%)
Query: 315 PPTSW-GTPGAPSMQQPGYGYVQPGAYPGQ-TPQYNMSQPPYGGYPSQP---TPGGYPG 368
PPTS G GA SM P G Q G YPG+ P + PPY P P PGG PG
Sbjct: 680 PPTSQAGAGGANSM--PS-G-AQAGGYPGRGMPNHTGQYPPYQWVPPSPQQTVPGGAPG 734
Score = 89 (36.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 27/64 (42%), Positives = 28/64 (43%)
Query: 308 QQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG-GYPS--QPTPG 364
QQG Q P G P AP QQ G G V P P PP G GYP+ TPG
Sbjct: 1301 QQGQQPPPSVGGGPPPAP--QQHGPGQVPPSPQQHVRPAAGAPYPPGGSGYPTPVSRTPG 1358
Query: 365 G-YP 367
YP
Sbjct: 1359 SPYP 1362
Score = 85 (35.0 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 28/76 (36%), Positives = 29/76 (38%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPG-YG---YVQPGAYPGQTPQYNMSQPPYG 355
P M GGY G P P P PG Y PGAY P SQ G
Sbjct: 629 PHMHGGYKMGGPGQSPGAQGYPPQQPQQYPPGNYPPRPQYPPGAYATGPPPPPTSQAGAG 688
Query: 356 GYPSQPT---PGGYPG 368
G S P+ GGYPG
Sbjct: 689 GANSMPSGAQAGGYPG 704
Score = 84 (34.6 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 42/143 (29%), Positives = 54/143 (37%)
Query: 471 GHTPSYGAQG--DSTQAPPPVQSSAAM-GQQGYGTGQQPSPNTASYPPQGATQPSYGVPP 527
G T S G+ DS APP +AA+ G GY G P P + P AT PP
Sbjct: 1129 GTTNSTGSSNSQDSFPAPPGSAPNAAIDGYPGY-PGGSPYPVASGPQPDYATAGQMQRPP 1187
Query: 528 TSQSGYGSQVPPQSGYAGYGMP-QAQKPLANPPAYGQTQQSPGSAGGYGQ-PGYSHSQPP 585
SQ+ + P + G P +P A G S G+ G GQ PG +
Sbjct: 1188 -SQNNPQTPHPGAAAAVAAGDNISVSNPFEDPIAAGGGPGS-GTGPGPGQGPGPGAASGG 1245
Query: 586 PSSYAQPDSGSQRAPPSNYGAAT 608
+ G Q PP + T
Sbjct: 1246 AGAVGAVGGGPQPHPPPPHSPHT 1268
Score = 80 (33.2 bits), Expect = 4.8e-10, Sum P(4) = 4.8e-10
Identities = 25/67 (37%), Positives = 29/67 (43%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPG----QTPQYNMSQPPYGGYPSQ 360
G SQQ Y+ PPT+ T S P +G G+YP Q Q Q G P
Sbjct: 295 GPSQQ-YRTPPPTN--TSRGQSPYPPAHGQ-NSGSYPSSPQQQQQQQQQQQQQAGQQPGG 350
Query: 361 PTPGGYP 367
P PGG P
Sbjct: 351 PVPGGPP 357
Score = 80 (33.2 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 38/116 (32%), Positives = 44/116 (37%)
Query: 479 QGDSTQAPPPVQSSAAMGQQGY---GTGQQPSPNTASYPP--QGATQPSYGVPPTSQSGY 533
QG Q PP S + G G G P A PP QG Q PP G
Sbjct: 1649 QGGVPQPPPQQASHGGVPSPGLPQVGPGGMVKPPYAMPPPPSQGVGQQVGQGPP---GGM 1705
Query: 534 GSQVPP-QSGYAGYGMPQAQKPLAN--P-----PAYGQTQQSPGSA---GGYGQPG 578
SQ PP G A P Q+P ++ P P + Q P + GGYG PG
Sbjct: 1706 MSQKPPPMPGQAMQQQPLQQQPPSHQHPHPHQHPQHQHPHQMPPNQTAPGGYGPPG 1761
Score = 77 (32.2 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 25/72 (34%), Positives = 31/72 (43%)
Query: 300 PAMAGGYSQQGYQARPP---TSWGTPGA-PSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG 355
P A G ++ PP ++G A P+M YG PG P Q Q + Q P
Sbjct: 127 PEHAPGVKEEYTHLPPPHPHPAYGRYHADPNMDPYRYGQPLPGGKPPQQQQPHPQQQP-- 184
Query: 356 GYPSQPTPGGYP 367
P QP PGG P
Sbjct: 185 --PQQPGPGGSP 194
Score = 71 (30.1 bits), Expect = 3.7e-09, Sum P(4) = 3.7e-09
Identities = 23/67 (34%), Positives = 25/67 (37%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP-----YGGYPSQ 360
YS Y P W PG S PG G+ P A P P PP GG P
Sbjct: 399 YSTHQYP-EPNRPW--PGGSS-PSPGSGHPLPPASPHHVPPLQQQPPPPPHVSAGGPPPS 454
Query: 361 PTPGGYP 367
+PG P
Sbjct: 455 SSPGHAP 461
Score = 71 (30.1 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 302 MAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQP----GAYPGQTPQYNMSQPPYGGY 357
+AGG G PP+S G PS Q Y QP P + P + PY GY
Sbjct: 1442 VAGGPPAGGAPGAPPSSAYPTGRPSQQD----YYQPPPDQSPQPRRHPDFIKDSQPYPGY 1497
Query: 358 PSQP 361
++P
Sbjct: 1498 NARP 1501
Score = 70 (29.7 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 23/47 (48%), Positives = 24/47 (51%)
Query: 328 QQPGYGYVQPGAYPG---QTPQYNMSQPP---YGGYPSQ-PTPGGYP 367
QQPG G V G PG Q PQ N PP Y YP + PTP G P
Sbjct: 346 QQPG-GPVPGGPPPGTGQQPPQQNT--PPTSQYSPYPQRYPTPPGLP 389
Score = 69 (29.3 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 20/61 (32%), Positives = 25/61 (40%)
Query: 311 YQARPPTSWGTPGAPSMQQPG----YGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGY 366
Y A PP G PG P P Y ++ P + Q +GG P+ P PGG
Sbjct: 69 YGAPPPPGSG-PGGPPGPDPAAVMHYHHLHQQQQQHPPPPHMQQQQHHGG-PAPPPPGGA 126
Query: 367 P 367
P
Sbjct: 127 P 127
Score = 69 (29.3 bits), Expect = 5.8e-09, Sum P(4) = 5.8e-09
Identities = 29/88 (32%), Positives = 34/88 (38%)
Query: 294 ENRIRNPAMAGGYS-QQGYQARPPTSWG-----TPGAPSMQQPGYGYVQP----GAY--- 340
+ + N A + S QQ PP + G TP P G GY P G Y
Sbjct: 579 QQQASNSASSASNSPQQTPPPAPPPNQGMNNMATPPPPPQGAAGGGYPMPPHMHGGYKMG 638
Query: 341 -PGQTPQYNMSQPPYGGYPSQPTPGGYP 367
PGQ+P PP P Q PG YP
Sbjct: 639 GPGQSPGAQ-GYPPQ--QPQQYPPGNYP 663
Score = 68 (29.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 23/64 (35%), Positives = 30/64 (46%)
Query: 313 ARPPTSWGTPGAPSMQQPGYGYVQP------GAYPG-QTPQYNMSQPPYGGYPSQPT-PG 364
A PP++ PGA + P G P G+ P Q Q N++ PYG P + PG
Sbjct: 23 ATPPSAGAAPGAAT--PPTSGPPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPPGSGPG 80
Query: 365 GYPG 368
G PG
Sbjct: 81 GPPG 84
Score = 68 (29.0 bits), Expect = 7.3e-09, Sum P(4) = 7.3e-09
Identities = 29/109 (26%), Positives = 39/109 (35%)
Query: 262 PPGDTSTERTVQIDGTSEQIESAKQLVNEVISENR-IRNPAMAGGYSQQGYQARPPTSWG 320
PPG T + V S S + ++ +++N I PA + S G +PP G
Sbjct: 499 PPG-TPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPA-SNQSSSGGPMQQPPVGAG 556
Query: 321 TPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPGN 369
P P PG P Q Q + S P Q P P N
Sbjct: 557 GP-PPMPPHPGMPGGPPQQQQSQQQQASNSASSASNSPQQTPPPAPPPN 604
Score = 68 (29.0 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 26/73 (35%), Positives = 31/73 (42%)
Query: 298 RNPAMAGGYSQQGYQARPPTS---WGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPY 354
+N M Y +G +A PPT +G G+ QP G QP P QT PP
Sbjct: 1397 QNRNMYPPYGPEG-EA-PPTGANQYGPYGSRPYSQPPPGGPQP---PTQTVA---GGPPA 1448
Query: 355 GGYPSQPTPGGYP 367
GG P P YP
Sbjct: 1449 GGAPGAPPSSAYP 1461
Score = 64 (27.6 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 23/83 (27%), Positives = 37/83 (44%)
Query: 288 VNEVISENRIRNPAMAGGYSQQGY--QARPPTSWGTPG-APSMQQPGYGYVQPGAYPGQT 344
++EV ++ + N + A G Q ++R + AP P + PG PG+
Sbjct: 890 MDEVSQQSTLSNASAASGEDPQCTTPKSRKNDPYSQSHLAPPSTSPHPVVMHPGGGPGE- 948
Query: 345 PQYNMSQPPYGGYPSQPTPGGYP 367
+Y+MS PP + P P G P
Sbjct: 949 -EYDMSSPP-----NWPRPAGSP 965
Score = 64 (27.6 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 28/106 (26%), Positives = 38/106 (35%)
Query: 257 IPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPP 316
IP P G T T ++ + ++ + N + + A A QQ PP
Sbjct: 203 IPGQPPQGPTPTLNSL-LQSSNPPPPPQHRYANTYDPQQAAASAAAAAAAQQQQAGGPPP 261
Query: 317 TSWGTPGAPSMQQPG-YGYVQPGAYPGQTPQYNMSQPPYGGYPSQP 361
G P P QP YG Q G P P Y+ P Y + P
Sbjct: 262 PGHGPP--PPQHQPSPYGGQQGGWAPPPRP-YSPQLGPSQQYRTPP 304
Score = 63 (27.2 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 24/66 (36%), Positives = 27/66 (40%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGY-GYVQPGAYP---GQTPQY----NMSQPPYGGYP 358
SQ + A PP S AP+ GY GY YP G P Y M +PP P
Sbjct: 1139 SQDSFPA-PPGS-----APNAAIDGYPGYPGGSPYPVASGPQPDYATAGQMQRPPSQNNP 1192
Query: 359 SQPTPG 364
P PG
Sbjct: 1193 QTPHPG 1198
Score = 61 (26.5 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 27/69 (39%), Positives = 30/69 (43%)
Query: 309 QGYQARPPTSWGT--PGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY--PSQ---- 360
QG PP + P P + P G Q G Y G P Y SQPP GG P+Q
Sbjct: 1389 QGPGQYPPQNRNMYPPYGPEGEAPPTGANQYGPY-GSRP-Y--SQPPPGGPQPPTQTVAG 1444
Query: 361 -PTPGGYPG 368
P GG PG
Sbjct: 1445 GPPAGGAPG 1453
Score = 60 (26.2 bits), Expect = 8.4e-05, Sum P(3) = 8.4e-05
Identities = 28/75 (37%), Positives = 31/75 (41%)
Query: 304 GGYSQQGYQARPPTSWGTPGA-PSM---QQPGYGY-VQP---GAYPGQTPQYNMSQPPYG 355
G SQQ Y PP P P QP GY +P GA+ T QY +P Y
Sbjct: 1463 GRPSQQDYYQPPPDQSPQPRRHPDFIKDSQPYPGYNARPQIYGAWQSGTQQY---RPQY- 1518
Query: 356 GYPSQPTP---GGYP 367
PS P P GG P
Sbjct: 1519 --PSSPAPQNWGGAP 1531
Score = 59 (25.8 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 19/48 (39%), Positives = 22/48 (45%)
Query: 320 GTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYP 367
G+P P Q GYG G +PG P M P + G P PT G P
Sbjct: 783 GSPTPPQGPQ-GYGNGPTGMHPGM-P---MGPPHHMGPPHGPTNMGPP 825
Score = 57 (25.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 308 QQGY-QARPPTSWGTPGAPSMQQPGYGYVQPGAYP-GQTPQYNM----SQPP 353
QQ + Q +PP G G+P+ + P Y+ PG P G TP N S PP
Sbjct: 176 QQPHPQQQPPQQPGPGGSPN-RPPQQRYI-PGQPPQGPTPTLNSLLQSSNPP 225
Score = 56 (24.8 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 21 QTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
Q PP + P G P P P +Y + PPP
Sbjct: 647 QGYPPQQPQQYPPGNYPPRPQYPPGAYATGPPP 679
Score = 53 (23.7 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 22/63 (34%), Positives = 25/63 (39%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ 360
AM G + Q G PP G P P G G +P Y Q Q+ GGY
Sbjct: 736 AMVGNHVQ-GKGTPPPPVVGGPPPPQ----GSGSPRPLNYLKQHLQHK------GGYGGS 784
Query: 361 PTP 363
PTP
Sbjct: 785 PTP 787
Score = 52 (23.4 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 38 PDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQI 70
P PA +P +N VP P + F+ ++++ +
Sbjct: 959 PRPAGSPQVFNHVPVPQEPFRSTITTTKKSDSL 991
Score = 49 (22.3 bits), Expect = 6.2e-11, Sum P(4) = 6.2e-11
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 19 EDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVP 51
+ Q P+ AA P+ +AP A PTS P
Sbjct: 13 QQQGGAPAPAATPPSAGAAPGAATPPTSGPPTP 45
Score = 47 (21.6 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 11 GTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTS-YNSV--PPP 53
G P +++ + Q SA++ + P PA P N++ PPP
Sbjct: 570 GPPQQQQSQQQQASNSASSASNSPQQTPPPAPPPNQGMNNMATPPP 615
Score = 47 (21.6 bits), Expect = 9.8e-11, Sum P(4) = 9.8e-11
Identities = 16/50 (32%), Positives = 20/50 (40%)
Query: 13 PSKRKYEDQTTPPSAAARRPTGFS--APDPA-------VAPTSYNSVPPP 53
PS TPP++ P S DP+ VAP Y + PPP
Sbjct: 26 PSAGAAPGAATPPTSGPPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPP 75
Score = 44 (20.5 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 27/116 (23%), Positives = 40/116 (34%)
Query: 13 PSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAA 72
P R +Q++ + P G P P PP Q Q+ +++A A+
Sbjct: 533 PISRPASNQSSSGGPMQQPPVGAGGPPPMPPHPGMPGGPP-----QQQQSQQQQASNSAS 587
Query: 73 RLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMG 128
NS + P G + A PP P P +GGY+ MG
Sbjct: 588 SASNSPQ-QTPPPAPPPNQGMNNMATP--PPPPQGAAGGGYPMP-PHMHGGYK-MG 638
Score = 43 (20.2 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 14/49 (28%), Positives = 19/49 (38%)
Query: 6 QYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDP-AVAPTSYNSVPPP 53
Q S+ P + +Y + P AAA +A A P PPP
Sbjct: 220 QSSNPPPPPQHRYANTYDPQQAAASAAAAAAAQQQQAGGPPPPGHGPPP 268
Score = 41 (19.5 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 24 PPSAAARRPTGFSAPD--PAVAPTSYNSVPPPADE 56
PP +A P S+P P+ +P + P P E
Sbjct: 443 PPHVSAGGPPPSSSPGHAPSPSPQPSQASPSPHQE 477
Score = 39 (18.8 bits), Expect = 6.2e-11, Sum P(4) = 6.2e-11
Identities = 9/22 (40%), Positives = 9/22 (40%)
Query: 104 PPSDLKSIPAPSAIPVSYGGYQ 125
PP P P P YGG Q
Sbjct: 259 PPPPGHGPPPPQHQPSPYGGQQ 280
Score = 38 (18.4 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 346 QYNMSQPPYGGYPSQPTPGGYPG 368
Q +++ P +P PGG PG
Sbjct: 925 QSHLAPPSTSPHPVVMHPGGGPG 947
Score = 37 (18.1 bits), Expect = 9.5e-10, Sum P(4) = 9.5e-10
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 37 APDPAVAPTSYNSVPPPA 54
AP PA P S + P A
Sbjct: 18 APAPAATPPSAGAAPGAA 35
>UNIPROTKB|D4A6P8 [details] [associations]
symbol:Fubp3 "Protein Fubp3" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1307004 GO:GO:0003723 EMBL:AC108321
IPI:IPI00951068 Ensembl:ENSRNOT00000063932 ArrayExpress:D4A6P8
Uniprot:D4A6P8
Length = 277
Score = 186 (70.5 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 64/215 (29%), Positives = 100/215 (46%)
Query: 151 IKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAES----GG 206
IK +Q +G +IQ D D SP R+ ++MG P++ A ++IN+++ A+ GG
Sbjct: 2 IKKIQNDAGVRIQFKPD---DGISPERAAQVMGPPDRCQHAARIINELILTAQEREILGG 58
Query: 207 -SGIVAR-RLTGQ------AGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIP 258
+G R R G G +P +K GLVIGKGGE IK++ ++GA ++ +
Sbjct: 59 LTGTRGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVE-LQ 117
Query: 259 LHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
+ PP R I G +QIE A+ L++E + + P G Q ++PP +
Sbjct: 118 RNPPPNTDPNLRIFTIRGAPQQIEVARHLIDEKVGGASLGAPTAFG----QSPFSQPPAA 173
Query: 319 WGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP 353
P P + P TP +S PP
Sbjct: 174 PHQNTFPPRAFPNIA-AKVNGNPHSTP---VSGPP 204
Score = 116 (45.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 123 GYQSMGTSKKIE-----IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTR 177
G S+GT I+ +P + G++IGK GE IK + QSGA +++ R+ + + R
Sbjct: 70 GDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLR 129
Query: 178 SVELMGTPEQIAKAEQLINDVLAEAESG 205
+ G P+QI A LI++ + A G
Sbjct: 130 IFTIRGAPQQIEVARHLIDEKVGGASLG 157
Score = 67 (28.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 32/119 (26%), Positives = 48/119 (40%)
Query: 438 APQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQ 497
AP + +GQ+ P+ Q AA + NT P+ A+ + PV A
Sbjct: 158 AP-TAFGQS-PFSQPP----AAPH---QNTFPPRAFPNIAAKVNGNPHSTPVSGPPAFLT 208
Query: 498 QGYGTG----QQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQ 552
QG+G+ QQP+ S+ A Q S PP + Q+ + G + QAQ
Sbjct: 209 QGWGSTYQAWQQPTQQVPSHTTSAAPQASS--PPDYTMAWAEYYRQQAAFYGQTLGQAQ 265
>FB|FBgn0034157 [details] [associations]
symbol:resilin "resilin" species:7227 "Drosophila
melanogaster" [GO:0008150 "biological_process" evidence=ND]
[GO:0005214 "structural constituent of chitin-based cuticle"
evidence=ISS] InterPro:IPR000618 Pfam:PF00379 PROSITE:PS00233
PROSITE:PS51155 EMBL:AE013599 GO:GO:0005576 eggNOG:NOG12793
GO:GO:0042302 GeneTree:ENSGT00570000079107 GO:GO:0030023
EMBL:BT003322 RefSeq:NP_611157.1 RefSeq:NP_995860.1
UniGene:Dm.19192 MINT:MINT-1724311 EnsemblMetazoa:FBtr0087024
GeneID:36880 KEGG:dme:Dmel_CG15920 UCSC:CG15920-RA CTD:36880
FlyBase:FBgn0034157 InParanoid:Q9V7U0 OMA:DLGQNGY OrthoDB:EOG43TXC1
PhylomeDB:Q9V7U0 GenomeRNAi:36880 NextBio:800852 Bgee:Q9V7U0
GermOnline:CG15920 Uniprot:Q9V7U0
Length = 620
Score = 158 (60.7 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 64/191 (33%), Positives = 78/191 (40%)
Query: 417 PASGYNQQGQGYAQDSYG----GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGH 472
P+S Y GQG + G Y AP G G P D Y + G GN S
Sbjct: 149 PSSSYGAPGQGQGNGNGGRSSSSYGAPGGGNG-GRPSDT---YGAPGG-GNGGRPSD--- 200
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG 532
+YGA G P S++ G G G G +PS +T P G S G P +S
Sbjct: 201 --TYGAPGGGNNGGRP---SSSYGAPGGGNGGRPS-DTYGAPGGGNGNGSGGRPSSS--- 251
Query: 533 YGSQVPPQSGYAG-----YGMP-QAQKPLANPPAYGQTQQSPGS-AGGYGQPGYSHSQPP 585
YG+ Q G+ G YG P Q QKP + A G + G + YG PG P
Sbjct: 252 YGAPGQGQGGFGGRPSDSYGAPGQNQKPSDSYGAPGSGNGNGGRPSSSYGAPGSGPGGRP 311
Query: 586 PSSYAQPDSGS 596
SY P SGS
Sbjct: 312 SDSYGPPASGS 322
Score = 158 (60.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 67/209 (32%), Positives = 83/209 (39%)
Query: 416 PPASGYNQQGQ----GYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEG 471
PP+ Y GQ G DSYG AP G G P D Y A G G Q G
Sbjct: 28 PPSDSYGAPGQSGPGGRPSDSYG---APGGGNG-GRPSDS---YG-APGQGQGQGQGQGG 79
Query: 472 HT--PS--YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQG-ATQPS--YG 524
+ PS YGA G + S++ G G G G +PS +T P G +PS YG
Sbjct: 80 YAGKPSDTYGAPGGGNGNGG--RPSSSYGAPGGGNGGRPS-DTYGAPGGGNGGRPSDTYG 136
Query: 525 VPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGG------YGQPG 578
P +G G + P S Y G Q N + +PG G YG PG
Sbjct: 137 APGGGGNGNGGR--PSSSYGAPGQGQGN---GNGGRSSSSYGAPGGGNGGRPSDTYGAPG 191
Query: 579 YSHSQPPPSSYAQPDSGSQRA-PPSNYGA 606
+ P +Y P G+ P S+YGA
Sbjct: 192 GGNGGRPSDTYGAPGGGNNGGRPSSSYGA 220
Score = 147 (56.8 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 65/199 (32%), Positives = 76/199 (38%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSY 476
P G N G G SYG AP G G Y + G GN S +Y
Sbjct: 138 PGGGGNGNG-GRPSSSYG---APGQGQGNGNGGRSSSSYGAPGG-GNGGRPSD-----TY 187
Query: 477 GAQGDSTQAPPPVQSSAAMGQQGYGT-GQQPSPNTASY-PPQGAT--QPS--YGVPPTSQ 530
GA G P S G G G G +PS +SY P G +PS YG P
Sbjct: 188 GAPGGGNGGRP----SDTYGAPGGGNNGGRPS---SSYGAPGGGNGGRPSDTYGAPGGG- 239
Query: 531 SGYGSQVPPQSGYAGYGMPQAQKPLANPPA--YGQTQQSPGSAGGYGQPGYSHSQP--PP 586
+G GS P S Y G Q Q P+ YG Q+ + YG PG + P
Sbjct: 240 NGNGSGGRPSSSYGAPG--QGQGGFGGRPSDSYGAPGQNQKPSDSYGAPGSGNGNGGRPS 297
Query: 587 SSYAQPDSGSQRAPPSNYG 605
SSY P SG P +YG
Sbjct: 298 SSYGAPGSGPGGRPSDSYG 316
Score = 145 (56.1 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 64/210 (30%), Positives = 81/210 (38%)
Query: 417 PASGYNQQGQGYA---QDSYG---GYHA--PQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
P+S Y G G D+YG G + P YG G ++ YG
Sbjct: 101 PSSSYGAPGGGNGGRPSDTYGAPGGGNGGRPSDTYGAPGGGGNGNGGRPSSSYGAPGQGQ 160
Query: 469 QEGH----TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGAT--QPS 522
G+ + SYGA G P S G G G G +PS +T P G +PS
Sbjct: 161 GNGNGGRSSSSYGAPGGGNGGRP----SDTYGAPGGGNGGRPS-DTYGAPGGGNNGGRPS 215
Query: 523 --YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGS--AGGYGQPG 578
YG P G S G G G +P ++ A GQ Q G + YG PG
Sbjct: 216 SSYGAPGGGNGGRPSDTYGAPG-GGNGNGSGGRPSSSYGAPGQGQGGFGGRPSDSYGAPG 274
Query: 579 YSHSQPPPSSYAQPDSGSQRA--PPSNYGA 606
+Q P SY P SG+ P S+YGA
Sbjct: 275 --QNQKPSDSYGAPGSGNGNGGRPSSSYGA 302
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 57/200 (28%), Positives = 76/200 (38%)
Query: 417 PASGYNQQGQGYAQ-DSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTP 474
P+ Y GQG Q GGY P YG A G ++ YG + +
Sbjct: 60 PSDSYGAPGQGQGQGQGQGGYAGKPSDTYG-APGGGNGNGGRPSSSYGAPGGGNGGRPSD 118
Query: 475 SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS--G 532
+YGA G P + A G G G G +PS + + P QG + G +S G
Sbjct: 119 TYGAPGGGNGGRPS-DTYGAPGGGGNGNGGRPSSSYGA-PGQGQGNGNGGRSSSSYGAPG 176
Query: 533 YGSQVPPQSGYAGYGMPQAQKP--LANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYA 590
G+ P Y G +P P G P S+ YG PG + P +Y
Sbjct: 177 GGNGGRPSDTYGAPGGGNGGRPSDTYGAPGGGNNGGRPSSS--YGAPGGGNGGRPSDTYG 234
Query: 591 QPD----SGSQRAPPSNYGA 606
P +GS P S+YGA
Sbjct: 235 APGGGNGNGSGGRPSSSYGA 254
Score = 133 (51.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 55/186 (29%), Positives = 67/186 (36%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEG 471
SY P + Y G P YG AP G ++ YG +
Sbjct: 171 SYGAPGGGNGGRPSDTYGAPGGGNGGRPSDTYG--APGGGNNGGRPSSSYGAPGGGNGGR 228
Query: 472 HTPSYGAQGDST---QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ-PS--YGV 525
+ +YGA G P S A GQ G G +PS SY G Q PS YG
Sbjct: 229 PSDTYGAPGGGNGNGSGGRPSSSYGAPGQGQGGFGGRPSD---SYGAPGQNQKPSDSYGA 285
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLAN--PPAYGQTQQSPGSAGGYGQPGYSHSQ 583
P SG G+ P S Y G +P + PPA G G AGG G G +
Sbjct: 286 PG---SGNGNGGRPSSSYGAPGSGPGGRPSDSYGPPASGS---GAGGAGGSGPGGADYDN 339
Query: 584 PPPSSY 589
P+ Y
Sbjct: 340 DEPAKY 345
Score = 87 (35.7 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 25/68 (36%), Positives = 28/68 (41%)
Query: 304 GGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP-- 361
G Q G RP S+G PG + +P Y PG GQ Q Y G PS
Sbjct: 34 GAPGQSGPGGRPSDSYGAPGGGNGGRPSDSYGAPGQGQGQ----GQGQGGYAGKPSDTYG 89
Query: 362 TPGGYPGN 369
PGG GN
Sbjct: 90 APGGGNGN 97
Score = 86 (35.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 43/149 (28%), Positives = 56/149 (37%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
GYS +P G + GY+ GG + GY P Q G A+GY N +
Sbjct: 473 GYSNGKP--GGQDLGPGGYSGGRPGGQDLGRDGYSGGRPGGQDLG---ASGYSN----GR 523
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP--- 526
G + G+ G V G QGY +G +P + +P G P
Sbjct: 524 PGGNGNGGSDGGRVIIGGRVIGGQDGGDQGY-SGGRPGGQDLGRDGYSSGRPG-GRPGGN 581
Query: 527 -PTSQSG--YGSQVPPQSGYAGYGMPQAQ 552
SQ G Y S P Q G G+G P Q
Sbjct: 582 GQDSQDGQGYSSGRPGQGGRNGFG-PGGQ 609
Score = 83 (34.3 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 49/185 (26%), Positives = 62/185 (33%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
GYS +P N G GY+ GG SGY P Q G A GY N Q
Sbjct: 427 GYSSGRPGNGNGNGNG-GYSGGRPGGQDLGPSGYSGGRPGGQDLG---AGGYSNGKPGGQ 482
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
+ G G S P +G+ GY +G +P +P S
Sbjct: 483 D-----LGPGGYSGGRP----GGQDLGRDGY-SGGRPGGQDLGASGYSNGRPGGNGNGGS 532
Query: 530 QSG--------YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSH 581
G G Q GY+G G P Q + + G+ PG G Q G +
Sbjct: 533 DGGRVIIGGRVIGGQDGGDQGYSG-GRPGGQDLGRDGYSSGRPGGRPGGNGQDSQDGQGY 591
Query: 582 SQPPP 586
S P
Sbjct: 592 SSGRP 596
Score = 70 (29.7 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 22/68 (32%), Positives = 28/68 (41%)
Query: 304 GGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTP 363
GG + G RP +S+G PG + +P Y PG G P P GG + P
Sbjct: 92 GGGNGNG--GRPSSSYGAPGGGNGGRPSDTYGAPGGGNGGRPSDTYGAPGGGGNGNGGRP 149
Query: 364 G---GYPG 368
G PG
Sbjct: 150 SSSYGAPG 157
Score = 54 (24.1 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 19/69 (27%), Positives = 25/69 (36%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPS 359
P+ + G G RP ++G PG + +P Y PG G YG P
Sbjct: 101 PSSSYGAPGGGNGGRPSDTYGAPGGGNGGRPSDTYGAPGG--GGNGNGGRPSSSYGA-PG 157
Query: 360 QPTPGGYPG 368
Q G G
Sbjct: 158 QGQGNGNGG 166
>UNIPROTKB|P71590 [details] [associations]
symbol:fhaA "FHA domain-containing protein FhaA"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005829 GO:GO:0005618 GenomeReviews:AL123456_GR
EMBL:BX842572 Gene3D:2.60.200.20 SUPFAM:SSF49879 PIR:B70700
RefSeq:NP_214534.1 RefSeq:YP_006513334.1 PDB:2LC0 PDB:2LC1 PDB:3OUN
PDB:3PO8 PDB:3POA PDBsum:2LC0 PDBsum:2LC1 PDBsum:3OUN PDBsum:3PO8
PDBsum:3POA ProteinModelPortal:P71590 SMR:P71590 DIP:DIP-59047N
PhosSite:P12071703 PRIDE:P71590 EnsemblBacteria:EBMYCT00000001781
GeneID:13315997 GeneID:887067 KEGG:mtu:Rv0020c KEGG:mtv:RVBD_0020c
PATRIC:18148538 TubercuList:Rv0020c HOGENOM:HOG000235804
OMA:DQGYGQP ProtClustDB:CLSK790198 EvolutionaryTrace:P71590
InterPro:IPR022128 Pfam:PF12401 Uniprot:P71590
Length = 527
Score = 168 (64.2 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 68/213 (31%), Positives = 83/213 (38%)
Query: 416 PPASGYNQQGQGYAQDSYGGYH-----------APQSGYGQAAPYDQQQGYNSAAGYGNV 464
P GY QG+GY GGY P +GYG A YDQ GY + GYG
Sbjct: 251 PDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYG-APGYDQ--GYRQSGGYG-- 305
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG-YGTGQQPSP--NTASYPPQGATQP 521
S G P YG G+ + P A ++G Y P P +YP QG
Sbjct: 306 --PSPGGGQPGYGGYGEYGRGP-------ARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQ 356
Query: 522 SY--GVPPTSQSGYG--------SQVPPQSGYAGYGMPQAQKPLANPPAYGQT------Q 565
Y G + YG ++ P GYA G A+ P YGQ+ Q
Sbjct: 357 GYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAE-PAGRDYDYGQSGAPDYGQ 415
Query: 566 QSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQR 598
+PG GYGQ GY + S Q D GS R
Sbjct: 416 PAPGGYSGYGQGGYGSAGT--SVTLQLDDGSGR 446
Score = 137 (53.3 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 54/173 (31%), Positives = 63/173 (36%)
Query: 440 QSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG 499
+ G GQ P D+ Y+ Y + G P G+ D PP ++ Q G
Sbjct: 163 RGGQGQGRP-DEY--YDDR--YARPQEDPRGGPDPQGGS--DPRGGYPP-ETGGYPPQPG 214
Query: 500 YGTGQQPS----PNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYA--GYGMPQAQK 553
Y + P P YP QG G P Q GY P Q GY G G P Q
Sbjct: 215 YPRPRHPDQGDYPEQIGYPDQGGYPEQRGYP--EQRGY----PDQRGYQDQGRGYPD-QG 267
Query: 554 PLANPPAYGQTQQ-SPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
PP Y Q SPG A GYG PGY Y P G + YG
Sbjct: 268 QGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGYG-PSPGGGQPGYGGYG 319
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 51/175 (29%), Positives = 64/175 (36%)
Query: 416 PPASGYNQQGQGYAQDSYG--GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
P GY Q GY + + G + Q GY Y +Q+GY GY + +G
Sbjct: 204 PETGGYPPQ-PGYPRPRHPDQGDYPEQIGYPDQGGYPEQRGYPEQRGYPDQRGYQDQGR- 261
Query: 474 PSYGAQGDSTQAPP-----PVQS--SAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
Y QG PP PV +A G GY G + S P G QP YG
Sbjct: 262 -GYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGYG--PSPGGGQPGYG-- 316
Query: 527 PTSQSGYGSQVPPQSGYAGYGMP--QAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
+ G G + Y G P Q+P A P G Q A YG+ Y
Sbjct: 317 GYGEYGRGPARHEEGSYVPSGPPGPPEQRP-AYPDQGGYDQGYQQGATTYGRQDY 370
Score = 74 (31.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 26/68 (38%), Positives = 28/68 (41%)
Query: 306 YSQQGYQARPPTS-WGTPGAPSMQQPGYGYV-QPGAYPGQTPQYNMSQ-PPYGGYPSQ-- 360
Y Y ARP G P P GY + G YP Q P Y + P G YP Q
Sbjct: 174 YYDDRY-ARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQ-PGYPRPRHPDQGDYPEQIG 231
Query: 361 -PTPGGYP 367
P GGYP
Sbjct: 232 YPDQGGYP 239
>ZFIN|ZDB-GENE-000308-1 [details] [associations]
symbol:igf2bp3 "insulin-like growth factor 2 mRNA
binding protein 3" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730 "mRNA
3'-UTR binding" evidence=ISS] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 Pfam:PF13014 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 ZFIN:ZDB-GENE-000308-1
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003730 HSSP:Q9Y6M1 HOVERGEN:HBG052725
KO:K13197 eggNOG:NOG249985 GeneTree:ENSGT00530000063171
HOGENOM:HOG000000675 OrthoDB:EOG405S0T CTD:10643 OMA:EAQDTKF
EMBL:AF161270 EMBL:BC045873 IPI:IPI00497892 RefSeq:NP_571566.1
UniGene:Dr.8280 ProteinModelPortal:Q9PW80 SMR:Q9PW80 PRIDE:Q9PW80
Ensembl:ENSDART00000010140 GeneID:30967 KEGG:dre:30967
InParanoid:Q9PW80 NextBio:20807119 ArrayExpress:Q9PW80 Bgee:Q9PW80
Uniprot:Q9PW80
Length = 582
Score = 196 (74.1 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 75/225 (33%), Positives = 108/225 (48%)
Query: 89 NGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIE-----IPNIRVGVI 143
N G F A G SP + S P P A GYQS G + E IP + VG I
Sbjct: 370 NALGLFPGAASGGISP--SVVSGPPPGA----QAGYQSFGAQMESETVHLFIPALAVGAI 423
Query: 144 IGKSGETIKYLQLQSGAKIQVTRDTEAD-LNSPTRSVELMGTPEQIAKAEQLINDVLAEA 202
IGK G+ IK L +GA I++ AD +++ R V + G PE KA+ I L E
Sbjct: 424 IGKQGQHIKQLSRFAGASIKIA---PADGIDAKQRMVIISGPPEAQFKAQGRIFGKLKEE 480
Query: 203 ESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLP 262
G + +A H +K+P+ G VIGKGG+T+ +Q T A + V+P
Sbjct: 481 NFFGP---KEEVKLEA---H--IKVPSFAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQT 531
Query: 263 PGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRN---PAMAG 304
P D + + V+I G + A++ + E+IS+ R + P+ AG
Sbjct: 532 P-DENDQVVVKITGHFYASQLAQRKIQEIISQVRRQQQPKPSAAG 575
Score = 136 (52.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 44/166 (26%), Positives = 84/166 (50%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
++ +P VG IIGK G TI+ + Q+ +KI + R A + + + + TPE + A
Sbjct: 198 RLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENA--GAAEKPITVHSTPEGCSSA 255
Query: 192 EQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQAR 249
+ I +++ + E+ + ++T + +KI NN VG +IGK G +K ++
Sbjct: 256 CRNIMEIM-QKEA-----IDTKIT-----EEIPLKILAHNNFVGRLIGKEGRNLKKIEQD 304
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
T +I + PL + ERT+ + GT + A++ + + + E+
Sbjct: 305 TDTKITISPLQ-DLTLYNPERTITVKGTLDACAKAEEEIMKKVRES 349
Score = 42 (19.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 517 GATQPSY--GVPPTSQSGYGS 535
G PS G PP +Q+GY S
Sbjct: 381 GGISPSVVSGPPPGAQAGYQS 401
Score = 41 (19.5 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 568 PGSAGGYGQPGYSHSQPPPSSYAQPDS-GSQ 597
PG+A G P S PPP + A S G+Q
Sbjct: 376 PGAASGGISPSVV-SGPPPGAQAGYQSFGAQ 405
Score = 38 (18.4 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 507 SPNTASYPPQGATQPSY 523
SP+ S PP GA Q Y
Sbjct: 384 SPSVVSGPPPGA-QAGY 399
>WB|WBGene00001734 [details] [associations]
symbol:grl-25 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] GO:GO:0009792
GO:GO:0040010 GO:GO:0000003 EMBL:Z11126
GeneTree:ENSGT00570000079107 EMBL:Z12018 RefSeq:NP_001023025.1
ProteinModelPortal:G5EDQ6 EnsemblMetazoa:ZK643.8 GeneID:176265
KEGG:cel:CELE_ZK643.8 CTD:176265 WormBase:ZK643.8 OMA:QYLGAYA
NextBio:891834 Uniprot:G5EDQ6
Length = 774
Score = 196 (74.1 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 83/316 (26%), Positives = 117/316 (37%)
Query: 304 GGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTP 363
GGYS PP P AP+ G GY + + G Y+ GG S +
Sbjct: 293 GGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSG-----GGEASSSSG 347
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQ 423
GGY G + GYS +S +
Sbjct: 348 GGYSGGGESSSSGGSSYSSGGDSSSSSGGGYSSGGDSSSSSSSSG-GYSGGSDSSSSSSS 406
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDST 483
GY S GG A S G+++ SA GY +++ E + Y G S
Sbjct: 407 SSGGY---SSGGGDAGASSGGESS---------SAGGYSGSSSSGGEASSGGYSG-GSSE 453
Query: 484 QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP---PTSQSG-Y-GSQVP 538
AP P + A+ G GY G + +P A P G S P P + SG Y GS+
Sbjct: 454 PAPAPEAAPASSG--GYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSGGYSGSEAA 511
Query: 539 PQS-------GYAGY-GMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSY- 589
P++ GY+G P+A P A Y ++ +P +A GYS S+ P +
Sbjct: 512 PEAAPAAPSGGYSGSEAAPEAA-PAAPSGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 570
Query: 590 AQPD---SGSQRAPPS 602
A P SGS+ + P+
Sbjct: 571 AAPSGGYSGSESSAPA 586
Score = 143 (55.4 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 77/317 (24%), Positives = 115/317 (36%)
Query: 303 AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPT 362
+GGY+ G +S G+ G G GY G G + GGY S P
Sbjct: 241 SGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGY-SAPA 299
Query: 363 PGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYN 422
P G YS G
Sbjct: 300 AAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGGYS----GGGE 355
Query: 423 QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGY--GNVNNTSQEGHTPSYGAQG 480
G + S GG + SG G ++ D +S+ GY G+ +++S + Y + G
Sbjct: 356 SSSSGGSSYSSGGDSSSSSGGGYSSGGDSSSSSSSSGGYSGGSDSSSSSSSSSGGYSSGG 415
Query: 481 DSTQAPPPVQSSAAMGQQGYGT-GQQPSPNTASYPPQGATQPSYG--VPPTSQSGY--GS 535
A +SS+A G G + G + S + Y G+++P+ P S GY GS
Sbjct: 416 GDAGASSGGESSSAGGYSGSSSSGGEAS--SGGYSG-GSSEPAPAPEAAPASSGGYSGGS 472
Query: 536 QVPPQS-------GYAGY-GMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPS 587
+ P++ GY+G P+A P A Y ++ +P +A GYS S+ P
Sbjct: 473 EAAPEAAPAAPSGGYSGSEAAPEAA-PAAPSGGYSGSEAAPEAAPAAPSGGYSGSEAAPE 531
Query: 588 SY-AQPD---SGSQRAP 600
+ A P SGS+ AP
Sbjct: 532 AAPAAPSGGYSGSEAAP 548
>UNIPROTKB|F1RFI8 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0005634
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 OMA:EGTSTGY EMBL:CU640468
EMBL:CT737304 Ensembl:ENSSSCT00000010930 Uniprot:F1RFI8
Length = 606
Score = 194 (73.4 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 69/203 (33%), Positives = 81/203 (39%)
Query: 410 GYS-YSQPPASGYNQQGQ-GYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNT 467
GYS Y+ P GY Q Q Y Q SYG Y P Y Q Q + A YG
Sbjct: 17 GYSAYTAQPTQGYAQTTQQAYGQQSYGTYGQPTD-----VSYTQAQ---TTATYGQTAYA 68
Query: 468 SQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQG--ATQPSYGV 525
+ G P+ G ST P S QGYGTG + Q A Q +YG
Sbjct: 69 TSYGQPPT----GYSTPTAPQAYSQPV---QGYGTGAYDTTTATVTTTQASYAAQSAYGT 121
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQA----QKPLANPPAYGQTQQSPGSAGGYGQPGYSH 581
P + YG Q P + A Y Q Q + YGQ S G YGQ S+
Sbjct: 122 QP-AYPAYGQQ-PAATAPASYSSTQPTSYDQSSYSQQNTYGQPS-SYGQQSSYGQQS-SY 177
Query: 582 SQPPPSSYAQPDSGSQRAPPSNY 604
Q PP+SY P +GS PS Y
Sbjct: 178 GQQPPTSYP-PQTGSYSQAPSQY 199
Score = 157 (60.3 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 59/189 (31%), Positives = 75/189 (39%)
Query: 441 SGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAP-PPVQSSAAMGQQG 499
S Y QAA Y + G T Q SYG G T Q++A GQ
Sbjct: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTA 66
Query: 500 YGT--GQQPSPNTASYPPQGATQP--SYGVPP---------TSQSGYGSQVP--PQSGYA 544
Y T GQ P+ + PQ +QP YG T+Q+ Y +Q Q Y
Sbjct: 67 YATSYGQPPTGYSTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYP 126
Query: 545 GYGMPQAQKPLANPPA-YGQTQQSPGSAGGYGQPGYSHSQPPP----SSYAQPDSGSQRA 599
YG Q+P A PA Y TQ + Y Q ++ QP SSY Q S Q+
Sbjct: 127 AYG----QQPAATAPASYSSTQPTSYDQSSYSQQN-TYGQPSSYGQQSSYGQQSSYGQQ- 180
Query: 600 PPSNYGAAT 608
PP++Y T
Sbjct: 181 PPTSYPPQT 189
Score = 138 (53.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 75/292 (25%), Positives = 101/292 (34%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQY-NMSQPPYG-GYP---- 358
GY+Q QA S+GT G P+ Y Q A GQT + QPP G P
Sbjct: 28 GYAQTTQQAYGQQSYGTYGQPT--DVSYTQAQTTATYGQTAYATSYGQPPTGYSTPTAPQ 85
Query: 359 --SQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQP 416
SQP G G +D YS +QP
Sbjct: 86 AYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPASYSSTQP 145
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSY 476
+ Y Q SY + Q+ YGQ + Y QQ Y + YG TS T SY
Sbjct: 146 TS---------YDQSSY----SQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSY 192
Query: 477 GAQGDSTQAPPPV-QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGS 535
+QAP Q S++ GQQ ++ + T S +G+ Q + S + S
Sbjct: 193 ------SQAPSQYSQQSSSYGQQSELLREKTNLLTNSL--RGSEQLAL----EHNSSFDS 240
Query: 536 QV--PPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPP 585
Q+ P G G + S G GG+ +PG + P
Sbjct: 241 QMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGPMDEGP 292
>UNIPROTKB|F1PUD6 [details] [associations]
symbol:NOVA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GeneTree:ENSGT00650000093048 OMA:TPPEVVC
EMBL:AAEX03000869 EMBL:AAEX03000868 Ensembl:ENSCAFT00000006989
Uniprot:F1PUD6
Length = 502
Score = 191 (72.3 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 67/246 (27%), Positives = 106/246 (43%)
Query: 104 PPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQ 163
PP D P+P A P G Y K+ IP+ G IIGK G+TI LQ ++GA I+
Sbjct: 25 PPPDCPP-PSPCA-PAEEGEY-----FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK 77
Query: 164 VTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEA-ESGGSGIVARRLTGQAGSDH 222
+++ + + R + GT E + I + + E ++ V L Q +
Sbjct: 78 LSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNP 137
Query: 223 FAMK-----IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGT 277
K +PN+ GL+IGKGG T+K + ++GA +Q+ P G ER V + G
Sbjct: 138 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS--QKPEGINLQERVVTVSGE 195
Query: 278 SEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGA-PSMQQPGYGYVQ 336
EQ+ A + + + E+ + + Y+ G+P A P+ P
Sbjct: 196 PEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAAS 255
Query: 337 PGAYPG 342
A G
Sbjct: 256 AAAASG 261
Score = 138 (53.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 36/113 (31%), Positives = 61/113 (53%)
Query: 198 VLAEAESGGSG--IVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
V A A +G +G + A +L ++ + + +P N VG ++GKGG+T+ Q TGARIQ
Sbjct: 392 VAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQ 451
Query: 256 VIPL-HLPPGDTSTERTVQIDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
+ PG + R V I G+ ++A+ L+++ ++ E +R NP G
Sbjct: 452 ISKKGEFLPG--TRNRRVTITGSPAATQAAQYLISQRVTYEQGVRASNPQKVG 502
Score = 46 (21.3 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 34/133 (25%), Positives = 48/133 (36%)
Query: 462 GNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG----YGTGQQPSPNTASYPPQG 517
G V N++ G +P Y + D A ++AA G G G G P+ A +
Sbjct: 229 GPVANSNPTG-SP-YASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPAALPA-FSGTD 285
Query: 518 ATQPSYGVPPTSQSGYGSQVPPQ--SGYAGYGMPQAQKPLANPPAYGQTQQSPGSAG--G 573
S + + GY + + A G+ A ANP A AG G
Sbjct: 286 LLAISTALNTLASYGYNTNSLGLGLNSAAASGVLAAVAAGANPAAAAAANLLASYAGEAG 345
Query: 574 YGQPGYSHSQPPP 586
G G + PPP
Sbjct: 346 AGPAGGAAPPPPP 358
>UNIPROTKB|F1NPL2 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074311 EMBL:AADN02008174
IPI:IPI00812713 Ensembl:ENSGALT00000021485 ArrayExpress:F1NPL2
Uniprot:F1NPL2
Length = 319
Score = 187 (70.9 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 78/256 (30%), Positives = 118/256 (46%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ + P R
Sbjct: 5 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEGS-----CPERI 58
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGK 238
V + G + I KA +I L E + + +T + + +P ++ G +IGK
Sbjct: 59 VTITGPTDAIFKAFSMI--ALKFEEDINASMTNSTVTSKPPVT-LRLVVPASQCGSLIGK 115
Query: 239 GGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRI 297
GG IK ++ TGA++QV LP STER V I GT + I + KQ+ V+ +
Sbjct: 116 GGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQIC--VVM---L 167
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP--QYNMSQPPYG 355
+P + A P + A ++Q G Y P +P T Q M PP+
Sbjct: 168 ESPPKGATIPYRPKPASAPIIFAGGQAFTIQ--GQ-YAIP--HPDLTKLHQLAMQHPPFT 222
Query: 356 GYPSQPTPGGYPGNWD 371
Q TPG +P D
Sbjct: 223 PL-GQTTPG-FPERLD 236
>UNIPROTKB|F1NPL4 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074311 EMBL:AADN02008174
IPI:IPI00571530 Ensembl:ENSGALT00000021482 ArrayExpress:F1NPL4
Uniprot:F1NPL4
Length = 326
Score = 185 (70.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 77/252 (30%), Positives = 117/252 (46%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ + P R
Sbjct: 5 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEGS-----CPERI 58
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGK 238
V + G + I KA +I L E + + +T + + +P ++ G +IGK
Sbjct: 59 VTITGPTDAIFKAFSMI--ALKFEEDINASMTNSTVTSKPPVT-LRLVVPASQCGSLIGK 115
Query: 239 GGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRI 297
GG IK ++ TGA++QV LP STER V I GT + I + KQ+ V+ +
Sbjct: 116 GGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQIC--VVM---L 167
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP--QYNMSQPPYG 355
+P + A P + A ++Q G Y P +P T Q M PP+
Sbjct: 168 ESPPKGATIPYRPKPASAPIIFAGGQAFTIQ--GQ-YAIP--HPDLTKLHQLAMQHPPFT 222
Query: 356 GYPSQPTPGGYP 367
Q TPG +P
Sbjct: 223 PL-GQTTPG-FP 232
Score = 116 (45.9 bits), Expect = 0.00081, P = 0.00081
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 118 PVSYGGYQSMG--TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSP 175
PV + G + +S ++ IPN +G IIG+ G I ++ SGA+I++ TE S
Sbjct: 232 PVPHIGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEG---SA 288
Query: 176 TRSVELMGTPEQIAKAEQLIN 196
R V + G+P I+ A+ LIN
Sbjct: 289 ERQVTITGSPANISLAQYLIN 309
>ZFIN|ZDB-GENE-080211-1 [details] [associations]
symbol:nova2 "neuro-oncological ventral antigen 2"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 ZFIN:ZDB-GENE-080211-1 GO:GO:0003723 eggNOG:NOG258094
HOGENOM:HOG000007833 HOVERGEN:HBG082048 EMBL:AY597523
IPI:IPI01006797 UniGene:Dr.77006 OrthoDB:EOG4D26RK
ArrayExpress:Q53B45 Uniprot:Q53B45
Length = 473
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 71/249 (28%), Positives = 110/249 (44%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 66 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNV 125
Query: 192 EQLINDVLAEAESGGS-----GIVARRLTGQAGSDHFA-MKIPNNKVGLVIGKGGETIKN 245
I + + E I+ + T A + +PN+ GL+IGKGG T+K
Sbjct: 126 HDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLVVPNSTAGLIIGKGGATVKA 185
Query: 246 MQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGG 305
+ ++GA +Q+ P G ER V I G EQ A +++ + I E+ + +
Sbjct: 186 VMEQSGAWVQLS--QKPDGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNIS 243
Query: 306 YSQ-QGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQ--TPQYNMSQPPYGGYPSQP 361
YS G A PT G+P A S + V P A T + Q G + P
Sbjct: 244 YSNISGPVANSNPT--GSPYANSAE------VMPAAAAAAAATASSLLGQASLAGVGAFP 295
Query: 362 TP-GGYPGN 369
T + GN
Sbjct: 296 TTMSSFSGN 304
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 51/191 (26%), Positives = 74/191 (38%)
Query: 90 GSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGE 149
G G F + FS +DL +I + SYG Y + + P GV+ +
Sbjct: 290 GVGAFPTTMSSFSG--NDLLAITSALNTLASYG-YNTNSLGLGLN-PAAASGVLAAVAAS 345
Query: 150 TIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMG-TPEQIAKAEQLINDVLAEAES-GGS 207
+ D P S L G T +A A N L+ A S
Sbjct: 346 ANPAAAAAANLLASYANDASTSAGHPATS--LGGFTLGSLAAATGATNGYLSAASPLVAS 403
Query: 208 GIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL-HLPPGDT 266
++A + D + +P N VG ++GKGG+T+ Q TGARIQ+ PG
Sbjct: 404 SLLATEKLAEGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG-- 461
Query: 267 STERTVQIDGT 277
+ R V I G+
Sbjct: 462 TRNRKVTITGS 472
>ASPGD|ASPL0000051147 [details] [associations]
symbol:rfeF species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005576
"extracellular region" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002035
PROSITE:PS50234 SMART:SM00327 EMBL:BN001307
EnsemblFungi:CADANIAT00008680 OMA:DCTSNFE Uniprot:C8VLE0
Length = 524
Score = 151 (58.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 50/148 (33%), Positives = 63/148 (42%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYD--QQQGYNSAAGYGNVNNTS 468
Y SG + G YGGY GYG +APY+ QQQ Y+ A Y ++ +
Sbjct: 388 YDTKDERGSGPSGAPPGPPPGQYGGYGQSGPGYGSSAPYNPGQQQPYSPA--YPP-HSQA 444
Query: 469 QEGHT--PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
G+ P G G +Q P P S A Y +GQQ +A YPP SYG
Sbjct: 445 PGGYAQPPPQGQYGGYSQ-PGPGYGSPAP----YSSGQQQGYGSAPYPPSSQASGSYG-- 497
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQKP 554
Q YG + Q GY G P Q+P
Sbjct: 498 ---QQQYGQRPGSQPGYPGQQPPYGQQP 522
Score = 133 (51.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 52/148 (35%), Positives = 62/148 (41%)
Query: 462 GNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQP 521
G+++++ G G + PPP Q GQ G G G ++A Y P G QP
Sbjct: 382 GSIDSSYDTKDERGSGPSG-APPGPPPGQYGG-YGQSGPGYG-----SSAPYNP-GQQQP 433
Query: 522 -SYGVPPTSQS--GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQ-TQQSPGSAGGYGQP 577
S PP SQ+ GY +Q PPQ Y GY P P YG S G GYG
Sbjct: 434 YSPAYPPHSQAPGGY-AQPPPQGQYGGYSQPG--------PGYGSPAPYSSGQQQGYGSA 484
Query: 578 GYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
Y S SY Q G QR P S G
Sbjct: 485 PYPPSSQASGSYGQQQYG-QR-PGSQPG 510
Score = 86 (35.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 30/76 (39%), Positives = 36/76 (47%)
Query: 295 NRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAY-PGQTPQYNMSQPP 353
++I N M+ S Y PPTS+ T G P+ G G Q G Y P Q PQ QPP
Sbjct: 5 SKIANAQMSASNSGGVYGGAPPTSY-TGGPPT----GAGS-QAGGYQPQQAPQ--QQQPP 56
Query: 354 --YGGYPSQPTPGGYP 367
Y YP + GYP
Sbjct: 57 QQYQAYPGG-SASGYP 71
Score = 59 (25.8 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 23/71 (32%), Positives = 29/71 (40%)
Query: 301 AMAGGYS-QQG-YQARPPTSWGT-PGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
+ AGGY QQ Q +PP + PG + P P PG P + +Q P G Y
Sbjct: 39 SQAGGYQPQQAPQQQQPPQQYQAYPGGSASGYPPQNAPYPPGPPG--PPH--AQAPGGQY 94
Query: 358 PSQPTPGGYPG 368
GG G
Sbjct: 95 GPPSGAGGAVG 105
>UNIPROTKB|F8W0G4 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC068889 EMBL:AC023509
HGNC:HGNC:8648 ChiTaRS:PCBP2 IPI:IPI01021465
ProteinModelPortal:F8W0G4 SMR:F8W0G4 PRIDE:F8W0G4
Ensembl:ENST00000551104 ArrayExpress:F8W0G4 Bgee:F8W0G4
Uniprot:F8W0G4
Length = 158
Score = 167 (63.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 49/142 (34%), Positives = 71/142 (50%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI 281
LP STER + I G + I
Sbjct: 137 MLP---NSTERAITIAGIPQSI 155
>UNIPROTKB|A8E651 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199
SMART:SM00360 SMART:SM00547 GO:GO:0005634 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG240581
GeneTree:ENSGT00530000063105 CTD:2130 HOGENOM:HOG000038010
HOVERGEN:HBG000970 KO:K13209 OMA:EGTSTGY OrthoDB:EOG42NJ15
EMBL:DAAA02045602 EMBL:BC153844 IPI:IPI00871084
RefSeq:NP_001103270.1 UniGene:Bt.33949 SMR:A8E651 STRING:A8E651
Ensembl:ENSBTAT00000023612 GeneID:534073 KEGG:bta:534073
InParanoid:A8E651 NextBio:20876260 Uniprot:A8E651
Length = 655
Score = 190 (71.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 76/212 (35%), Positives = 91/212 (42%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAP-YDQQQ----GYNSAAGYGNVNNTSQEG 471
++ Y+ Q AQ Y Y A P GY Q Y QQ G + Y T+ G
Sbjct: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG 62
Query: 472 HTP---SYGAQ--GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
T SYG G ST A P S QGYGTG + TA+ TQ SY
Sbjct: 63 QTAYATSYGQPPTGYSTPAAPQAYSQPV---QGYGTGAYDT-TTATVT---TTQASYA-- 113
Query: 527 PTSQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP--GY 579
+QS YG+Q P Y YG P A P N PA +T Q S GGY QP GY
Sbjct: 114 --AQSAYGTQ--P--AYPAYGQQPAATAPARPQDGNKPA--ETSQPQSSTGGYNQPSLGY 165
Query: 580 ---SHSQPP-PSSYA-QPDSGSQRAPPSNYGA 606
++S P P SY QP S PP++Y +
Sbjct: 166 GQSNYSYPQVPGSYPMQPVSAPPSYPPTSYSS 197
Score = 180 (68.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 74/221 (33%), Positives = 87/221 (39%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
GYS Y+ P GY Q Q Y Q SYG Y P Y Q Q + A YG +
Sbjct: 17 GYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTD-----VSYTQAQ---TTATYGQTAYAT 68
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQG--ATQPSYGVP 526
G P+ G ST A P S QGYGTG + Q A Q +YG
Sbjct: 69 SYGQPPT----GYSTPAAPQAYSQPV---QGYGTGAYDTTTATVTTTQASYAAQSAYGTQ 121
Query: 527 PTSQSGYGSQ----VP--PQSGY--AGYGMPQAQKPLANPPA--YGQTQQS-PGSAGGY- 574
P + YG Q P PQ G A PQ+ N P+ YGQ+ S P G Y
Sbjct: 122 P-AYPAYGQQPAATAPARPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP 180
Query: 575 -----GQPGY---SHSQPPPSSYAQPDSGSQRA--PPSNYG 605
P Y S+S P+SY Q Q PS+YG
Sbjct: 181 MQPVSAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYG 221
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 84/312 (26%), Positives = 107/312 (34%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQY-NMSQPPYGGYPSQPTP 363
GY+Q QA S+GT G P+ Y Q A GQT + QPP G Y + P
Sbjct: 28 GYAQTT-QAYGQQSYGTYGQPT--DVSYTQAQTTATYGQTAYATSYGQPPTG-YSTPAAP 83
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQP--PASGY 421
Y + + P P G
Sbjct: 84 QAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPARPQDGN 143
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGD 481
Q S GGY+ P GYGQ+ Y G + S PSY
Sbjct: 144 KPAETSQPQSSTGGYNQPSLGYGQS-----NYSYPQVPGSYPMQPVSAP---PSYPPTSY 195
Query: 482 STQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA--TQPSYGV-PPTS---QSGYGS 535
S+ P S+ Q YG QPS SY Q + Q SYG PPTS Q+G S
Sbjct: 196 SSTQPTSYDQSSYSQQNTYG---QPS----SYGQQSSYGQQSSYGQQPPTSYPPQTGSYS 248
Query: 536 QVPPQSGY--AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPD 593
Q P Q + YG Q+ +P + G Q +GG+ PG + S P + +
Sbjct: 249 QAPSQYSQQSSSYGQ-QSSFRQDHPSSMGVYGQE---SGGFSGPGENRSMSGPDNRGRGR 304
Query: 594 SGSQRAPPSNYG 605
G R S G
Sbjct: 305 GGFDRGGMSRGG 316
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 83/306 (27%), Positives = 100/306 (32%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP-QYNMSQPP--YGGYPSQPTP 363
+QQGY A T+ T G Q YG G Y T Y +Q YG +
Sbjct: 14 AQQGYSAY--TAQPTQGYAQTTQ-AYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSY 70
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQ 423
G P + Y +QP Y Q
Sbjct: 71 GQPPTGYSTPAAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG-TQPAYPAYGQ 129
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAA---PYDQQQGYNSAA-GYGNVNNTSQEGHTPSYGAQ 479
Q A PQ G A P GYN + GYG +N S SY Q
Sbjct: 130 QPAATAPAR------PQDGNKPAETSQPQSSTGGYNQPSLGYGQ-SNYSYPQVPGSYPMQ 182
Query: 480 GDSTQAPP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ- 536
S APP P S ++ Y NT P Q SYG QS YG Q
Sbjct: 183 PVS--APPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYG----QQSSYGQQP 236
Query: 537 ---VPPQSGYAGYGMPQAQKPLANPPAYGQT----QQSPGSAGGYGQPGYSHSQPPPS-S 588
PPQ+G Y +Q + +YGQ Q P S G YGQ S P + S
Sbjct: 237 PTSYPPQTG--SYSQAPSQYSQQSS-SYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRS 293
Query: 589 YAQPDS 594
+ PD+
Sbjct: 294 MSGPDN 299
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 53/155 (34%), Positives = 73/155 (47%)
Query: 468 SQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSP-------NTASYPPQGATQ 520
+Q+G++ +Y AQ TQ Q++ A GQQ YGT QP+ TA+Y Q A
Sbjct: 14 AQQGYS-AYTAQ--PTQGY--AQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG-QTAYA 67
Query: 521 PSYGVPPTSQSGYGSQVPPQSGYA----GYGMPQAQKPLANPPAYGQTQQSPGSAGGYG- 575
SYG PPT GY + PQ+ Y+ GYG A TQ S + YG
Sbjct: 68 TSYGQPPT---GYSTPAAPQA-YSQPVQGYGTGAYDTTTATVTT---TQASYAAQSAYGT 120
Query: 576 QPGYSH--SQPPPSSYAQPDSGSQRAPPSNYGAAT 608
QP Y QP ++ A+P G++ A S ++T
Sbjct: 121 QPAYPAYGQQPAATAPARPQDGNKPAETSQPQSST 155
Score = 124 (48.7 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 50/180 (27%), Positives = 70/180 (38%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
S PP S + Q Y Q SY + Q+ YGQ + Y QQ Y + YG TS T
Sbjct: 189 SYPPTSYSSTQPTSYDQSSY----SQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQT 244
Query: 474 PSYGAQGDSTQAPPPV-QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG 532
SY +QAP Q S++ GQQ PS + Y + G S SG
Sbjct: 245 GSY------SQAPSQYSQQSSSYGQQSSFRQDHPS-SMGVYGQESGGFSGPG-ENRSMSG 296
Query: 533 YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQP 592
++ + G+ GM + + G+ G GG+ +PG + P P
Sbjct: 297 PDNRGRGRGGFDRGGMSRGGR------GGGRGGMGAGERGGFNKPGGPMDEGPDLDLGPP 350
Score = 53 (23.7 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 4 EPQYSSDG--TPSKRKYEDQTTPPSAAARRPTG-FSAPDPAVAPTSYNSVPP 52
+PQ S+ G PS + + P P SAP P+ PTSY+S P
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVSAP-PSYPPTSYSSTQP 200
Score = 43 (20.2 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 21 QTTPPSAAARRPTGFSAPDPAVAPTSYN 48
QT ++ + PTG+S P AP +Y+
Sbjct: 63 QTAYATSYGQPPTGYSTP---AAPQAYS 87
>FB|FBgn0085362 [details] [associations]
symbol:Vml "Vitelline membrane-like" species:7227 "Drosophila
melanogaster" [GO:0009950 "dorsal/ventral axis specification"
evidence=IGI] [GO:0060388 "vitelline envelope" evidence=IDA]
[GO:0007305 "vitelline membrane formation involved in
chorion-containing eggshell formation" evidence=ISM] [GO:0008316
"structural constituent of vitelline membrane" evidence=ISM]
[GO:0035805 "egg coat" evidence=ISM] EMBL:AE014298 GO:GO:0009950
GeneTree:ENSGT00700000104744 PROSITE:PS51137 GO:GO:0060388
InterPro:IPR013135 RefSeq:NP_001096866.1 UniGene:Dm.32785
STRING:A8JUV4 EnsemblMetazoa:FBtr0112535 GeneID:5740271
KEGG:dme:Dmel_CG34333 UCSC:CG34333-RA CTD:5740271
FlyBase:FBgn0085362 eggNOG:NOG284187 InParanoid:A8JUV4 OMA:ISKYETI
OrthoDB:EOG4KPRTT GenomeRNAi:5740271 NextBio:20891311 Bgee:A8JUV4
Uniprot:A8JUV4
Length = 578
Score = 174 (66.3 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 81/313 (25%), Positives = 105/313 (33%)
Query: 311 YQARPPTSWGTPGAPSMQQPGY-GYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPGN 369
Y A +S+ P APS P Y P A P Y+ P P+ P+
Sbjct: 161 YSAPASSSYSAPAAPSYSAPAAPSYSAPAA-----PSYSAPAAPSYSAPAAPSYSAPAAP 215
Query: 370 WDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQQGQGYA 429
G SYS P A Y+
Sbjct: 216 SYSAPSAPSYSAQKTSSYSAPAAPSYHAPAAPASSYSAPAGPSYSAPAAPSYSAPSYSAP 275
Query: 430 QDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTP---SYGAQGDSTQAP 486
SY AP S AAP Y++ A ++ S +P SY A T +
Sbjct: 276 ASSYSALKAP-SYSAPAAP-----SYSAPAAPSYSSSASPSYSSPASSSYSAPAAPTYSA 329
Query: 487 PPVQSSAAMGQQGYGTGQQPS---PNTASYPPQGATQPSYGVPPT-SQSGYGS---QVPP 539
P QS +A Y PS P ++SY A PSY P S S + P
Sbjct: 330 PKAQSYSAPAAPSYSAPAAPSYSAPASSSYSAPAA--PSYSAPAAPSYSAPAAPSYSAPA 387
Query: 540 QSGYAGYGMPQAQKPLANPPAYG---QTQQSPGSAGGYGQPGY-SHSQPPPSSYAQPDSG 595
S Y+ P P A P+Y + S +A Y P S+S P SY+ P +
Sbjct: 388 SSSYSAPAAPSYSAPAA--PSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAP 445
Query: 596 SQRAPPSN-YGAA 607
S AP S+ Y AA
Sbjct: 446 SYSAPASSGYSAA 458
Score = 158 (60.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 71/295 (24%), Positives = 96/295 (32%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGY 366
S Y A+ +S+ P APS P A G P Y+ P PS P
Sbjct: 221 SAPSYSAQKTSSYSAPAAPSYHAPAAPASSYSAPAG--PSYSAPAAPSYSAPSYSAPAS- 277
Query: 367 PGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQ-QG 425
SYS P A Y+ +
Sbjct: 278 -----SYSALKAPSYSAPAAPSYSAPAAPSYSSSASPSYSSPASSSYSAPAAPTYSAPKA 332
Query: 426 QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT-PSYGAQGDSTQ 484
Q Y+ + Y AP + +AP +A Y S PSY A S+
Sbjct: 333 QSYSAPAAPSYSAPAAP-SYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSY 391
Query: 485 APPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA-TQPSYGVPPTSQSGYGSQVPPQSGY 543
+ P S +A Y S + + P A PSY P + S P S
Sbjct: 392 SAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAP-AAPSYSAPAAPSYSAP 450
Query: 544 A--GYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGS 596
A GY +A + PA G + +P ++ GY P S S P SSY+ P S +
Sbjct: 451 ASSGYSAARAYSAGSAAPASGYS--APKTSSGYSAPASSGS-PAASSYSAPASST 502
Score = 149 (57.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 79/313 (25%), Positives = 105/313 (33%)
Query: 311 YQARPPTSWGTPGAPSMQQPGYG-YVQPGAYPGQTPQY-NMSQPPYGGYPSQPTPGGYPG 368
Y A S+ P APS P Y P A P + S P Y S P Y
Sbjct: 113 YSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSY-SAPASSSYSA 171
Query: 369 NW-DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYN-QQGQ 426
SYS P A Y+ Q+
Sbjct: 172 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPSAPSYSAQKTS 231
Query: 427 GYAQDSYGGYHAPQSGYGQAAPYDQQQGYN-SAAGYGNVNNTSQEGHTPSYGAQGDSTQA 485
Y+ + YHAP + A+ Y G + SA + + S SY A + +
Sbjct: 232 SYSAPAAPSYHAPAA---PASSYSAPAGPSYSAPAAPSYSAPSYSAPASSYSALKAPSYS 288
Query: 486 PPPVQSSAAMGQQGYGTGQQPS---PNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSG 542
P S +A Y + PS P ++SY A P+Y P +QS P S
Sbjct: 289 APAAPSYSAPAAPSYSSSASPSYSSPASSSYSAPAA--PTYSAPK-AQSYSAPAAPSYSA 345
Query: 543 YAG--YGMPQAQKPLANP--PAYGQT---QQSPGSAGGYGQPGYS-HSQPPPSSYAQPDS 594
A Y P A + P P+Y S +A Y P S +S P SY+ P +
Sbjct: 346 PAAPSYSAP-ASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAA 404
Query: 595 GSQRAPPSN-YGA 606
S AP S+ Y A
Sbjct: 405 PSYSAPASSSYSA 417
Score = 148 (57.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 74/311 (23%), Positives = 100/311 (32%)
Query: 311 YQARPPTSWGTPGAPSMQQPGY-GYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPGN 369
Y A S+ P APS P Y P A P + Q S PS P +
Sbjct: 193 YSAPAAPSYSAPAAPSYSAPAAPSYSAPSA-PSYSAQKTSSYSAPAA-PSYHAPAAPASS 250
Query: 370 WDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XGYSYSQPPASGYNQQGQ-G 427
+ SYS P A Y+
Sbjct: 251 YSAPAGPSYSAPAAPSYSAPSYSAPASSYSALKAPSYSAPAAPSYSAPAAPSYSSSASPS 310
Query: 428 YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPP 487
Y+ + Y AP + +AP Q +A Y PSY A S+ + P
Sbjct: 311 YSSPASSSYSAPAAPT-YSAPKAQSYSAPAAPSYS-------APAAPSYSAPASSSYSAP 362
Query: 488 PVQSSAAMGQQGYGTGQQPS---PNTASYPPQGATQPSYGVPPT-SQSGYGSQ---VPPQ 540
S +A Y PS P ++SY A PSY P S S S P
Sbjct: 363 AAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAA--PSYSAPAAPSYSAPASSSYSAPAA 420
Query: 541 SGYAGYGMPQAQKPLANPPAYGQ----TQQSPGSAGGYGQPGYSH-SQPPPSSYAQPDSG 595
Y+ P P A P+Y + +P S+G YS S P S Y+ P +
Sbjct: 421 PSYSAPAAPSYSAPAA--PSYSAPAAPSYSAPASSGYSAARAYSAGSAAPASGYSAPKTS 478
Query: 596 SQRAPPSNYGA 606
S + P++ G+
Sbjct: 479 SGYSAPASSGS 489
Score = 145 (56.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 74/312 (23%), Positives = 97/312 (31%)
Query: 303 AGGYSQQ---GYQARPPTSWGTPGAP--SMQQP-GYGYVQPGAYPGQTPQYNMSQPPYGG 356
A YS Q Y A S+ P AP S P G Y P A P Y+ Y
Sbjct: 222 APSYSAQKTSSYSAPAAPSYHAPAAPASSYSAPAGPSYSAPAAPSYSAPSYSAPASSYSA 281
Query: 357 Y--PSQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYS 414
PS P P SYS
Sbjct: 282 LKAPSYSAPAA-PS----YSAPAAPSYSSSASPSYSSPASSSYSAPAAPTYSAPKAQSYS 336
Query: 415 QPPASGYNQQGQ-GYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
P A Y+ Y+ + Y AP + +AP +A Y ++S
Sbjct: 337 APAAPSYSAPAAPSYSAPASSSYSAPAAP-SYSAPAAPSYSAPAAPSYSAPASSSYSAPA 395
Query: 474 -PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA-TQPSYGVPPTSQS 531
PSY A + + P S +A Y PS + + P A PSY P + S
Sbjct: 396 APSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAP--ASS 453
Query: 532 GYGSQVPPQSGYA----GYGMPQAQKPLANPPAYGQTQQSPGSA--GGYGQPGYSHSQPP 585
GY + +G A GY P+ + P + G S SA GYS
Sbjct: 454 GYSAARAYSAGSAAPASGYSAPKTSSGYSAPASSGSPAASSYSAPASSTASSGYSAPASK 513
Query: 586 PSSYAQPDSGSQ 597
S YA+ + Q
Sbjct: 514 SSGYARSEMDHQ 525
Score = 144 (55.7 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 75/312 (24%), Positives = 101/312 (32%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGY 366
SQ Y + P AP Y P A P Y+ P P+ P+
Sbjct: 62 SQSSYSPAKDQGYSAPAAPVYSPAAPSYSAPAA-----PSYSAPAAPSYSAPAAPSYSA- 115
Query: 367 PGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQQGQ 426
P SYS P +S Y+
Sbjct: 116 PAA-PSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAA 174
Query: 427 -GYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT-PSYGAQGDSTQ 484
Y+ + Y AP + +AP +A Y S + PSY AQ S+
Sbjct: 175 PSYSAPAAPSYSAPAAP-SYSAPAAPSYSAPAAPSYSAPAAPSYSAPSAPSYSAQKTSSY 233
Query: 485 APP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSG 542
+ P P + A Y PS + + P A PSY P +S S + P S
Sbjct: 234 SAPAAPSYHAPAAPASSYSAPAGPSYSAPAAPSYSA--PSYSAPASSYSAL--KAPSYSA 289
Query: 543 YAG--YGMPQAQKPLANP-PAYGQTQQSPGSAGG---YGQP-GYSHSQPPPSSYAQPDSG 595
A Y P A ++ P+Y S SA Y P S+S P SY+ P +
Sbjct: 290 PAAPSYSAPAAPSYSSSASPSYSSPASSSYSAPAAPTYSAPKAQSYSAPAAPSYSAPAAP 349
Query: 596 SQRAPPSN-YGA 606
S AP S+ Y A
Sbjct: 350 SYSAPASSSYSA 361
Score = 120 (47.3 bits), Expect = 0.00074, P = 0.00074
Identities = 53/202 (26%), Positives = 74/202 (36%)
Query: 417 PASGYNQQGQGYAQDS--YGGYHA---PQSGYGQAAPYDQQQGYNSAA--GYGNVNNTSQ 469
PA+ + G+ + Y H P Y Y+ Q Y+ A GY
Sbjct: 23 PATRNEEFDDGFPESEFDYEERHTREIPAQAYAPPIVYNSQSSYSPAKDQGYSAPAAPVY 82
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
PSY A + + P S +A Y +P SY A PSY P +
Sbjct: 83 SPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYS-----APAAPSYSAPAA--PSYSAP--A 133
Query: 530 QSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYG---QTQQSPGSAGGYGQPGY-SHSQPP 585
S Y + P Y+ P P A P+Y + S +A Y P S+S P
Sbjct: 134 SSSYSAPAAPS--YSAPAAPSYSAPAA--PSYSAPASSSYSAPAAPSYSAPAAPSYSAPA 189
Query: 586 PSSYAQPDSGSQRAPPS-NYGA 606
SY+ P + S AP + +Y A
Sbjct: 190 APSYSAPAAPSYSAPAAPSYSA 211
Score = 61 (26.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 32/114 (28%), Positives = 45/114 (39%)
Query: 5 PQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPD-PAVAPTSYNSVPPPADEFQDFQAA 63
P YS+ PS Y P +A P+ +SAP P+ + + S PA AA
Sbjct: 87 PSYSAPAAPS---YSAPAAPSYSAPAAPS-YSAPAAPSYSAPAAPSYSAPASSSYSAPAA 142
Query: 64 KRRAEQIAARLCNSVSAEAKRPRVENGSGGFDS-ADKGFSSPPSDLKSIPA-PS 115
+A S SA A S + + A +S+P + S PA PS
Sbjct: 143 P----SYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPS 192
Score = 58 (25.5 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 48 NSVPPPADEFQDFQAAKRRAE-QIAARLCNSVSAEAKRPR-VENGSGGFDSA-DKGFSSP 104
N+ PA ++F +E R + A+A P V N + A D+G+S+P
Sbjct: 18 NAFSLPATRNEEFDDGFPESEFDYEERHTREIPAQAYAPPIVYNSQSSYSPAKDQGYSAP 77
Query: 105 PSDLKSIPAPS 115
+ + S APS
Sbjct: 78 AAPVYSPAAPS 88
>UNIPROTKB|H3BRU6 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC068889 EMBL:AC023509
HGNC:HGNC:8648 ChiTaRS:PCBP2 Ensembl:ENST00000562264 Uniprot:H3BRU6
Length = 301
Score = 175 (66.7 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 55/162 (33%), Positives = 81/162 (50%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 6 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 60
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 61 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 117
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNP 300
LP STER + I G + I E KQ+ V+ E ++P
Sbjct: 118 MLP---NSTERAITIAGIPQSIIECVKQIC-VVMLETLSQSP 155
Score = 121 (47.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 224 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 280
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 281 SLAQYLIN-VRLSSETGGMG 299
Score = 102 (41.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 214 LTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQ 273
L A + + IPN+ +G +IG+ G I ++ +GA+I++ P + ST+R V
Sbjct: 217 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT 272
Query: 274 IDGTSEQIESAKQLVNEVIS 293
I G++ I A+ L+N +S
Sbjct: 273 ITGSAASISLAQYLINVRLS 292
Score = 93 (37.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ K+ E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 15 ESVKKMREESGARI--NIS-EGNCPERIITLAGPTNAIFKAFAMIIDKLEE-DISSSMTN 70
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 71 STAASRPPVTLRLV-VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 127
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ I + + I V+ E S
Sbjct: 128 TIAGIPQSIIECVKQICVVMLETLS 152
Score = 46 (21.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 23/75 (30%), Positives = 31/75 (41%)
Query: 535 SQVPPQSGYAGYGMPQAQKPLANPPAY--GQT--------QQS--PGSAGGYGQPGYSHS 582
SQ PP+ G +P KP ++P + GQ QQS P + G G G S
Sbjct: 152 SQSPPK----GVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESS 207
Query: 583 QPPPSSYAQPDSGSQ 597
P Y D+ +Q
Sbjct: 208 SPEVKGYWGLDASAQ 222
Score = 38 (18.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 103 SPPSD--LKSIPAPSAIPVSYGGYQ 125
SPP + P PS+ PV + G Q
Sbjct: 154 SPPKGVTIPYRPKPSSSPVIFAGGQ 178
>TAIR|locus:2184362 [details] [associations]
symbol:BTR1L "AT5G04430" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008380 "RNA splicing" evidence=NAS] [GO:0003727
"single-stranded RNA binding" evidence=IPI] [GO:0046719 "regulation
of viral protein levels in host cell" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 EMBL:CP002688 GO:GO:0008380 GO:GO:0003727 KO:K14944
IPI:IPI00533577 RefSeq:NP_850764.1 UniGene:At.4918
ProteinModelPortal:F4JW99 SMR:F4JW99 PRIDE:F4JW99
EnsemblPlants:AT5G04430.2 GeneID:830322 KEGG:ath:AT5G04430
OMA:RNIMEIT PhylomeDB:F4JW99 GO:GO:0046719 Uniprot:F4JW99
Length = 334
Score = 185 (70.2 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 70/250 (28%), Positives = 113/250 (45%)
Query: 95 DSADKGFSSPPSDL-KSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKY 153
+S + + P +L K P P S T + + N G +IGK G TI
Sbjct: 2 ESTESYAAGSPEELAKRSPEPH--DSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITE 59
Query: 154 LQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL-AE--AESGGSGIV 210
Q +SGA+IQ++R+ E + R + + G+ +++ +LI D L +E AE G
Sbjct: 60 FQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEP 119
Query: 211 ARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTER 270
RR+ + +PN+ G +IGKGG TIK+ + A I++ PL S +R
Sbjct: 120 RRRIR---------LVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLS-DR 169
Query: 271 TVQIDGTSEQIESAKQLVNEVISEN-----RIRNPAMAGGYSQQGYQARPPTSWGTPGAP 325
V + GT E+ A L+ ++E+ + +P G G+ PP ++ P
Sbjct: 170 LVTLSGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHG-PPYAYALP--- 225
Query: 326 SMQQPGYGYV 335
S+ GY V
Sbjct: 226 SVATAGYNSV 235
Score = 37 (18.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 411 YSYSQPPAS--GYNQQGQGYAQDSYGG 435
Y+Y+ P + GYN YA + GG
Sbjct: 220 YAYALPSVATAGYNSVN--YAPNGSGG 244
>DICTYBASE|DDB_G0281955 [details] [associations]
symbol:agnD "argonaut-like protein" species:44689
"Dictyostelium discoideum" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016246 "RNA interference" evidence=ISS]
[GO:0003727 "single-stranded RNA binding" evidence=ISS]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 dictyBase:DDB_G0281955 GO:GO:0016246
GenomeReviews:CM000152_GR GO:GO:0003727 SUPFAM:SSF53098
SUPFAM:SSF101690 eggNOG:NOG286051 EMBL:AAFI02000044 KO:K02156
RefSeq:XP_001134555.1 ProteinModelPortal:Q1ZXG9
EnsemblProtists:DDB0233052 GeneID:8623325 KEGG:ddi:DDB_G0281955
InParanoid:Q1ZXG9 ProtClustDB:CLSZ2431313 Uniprot:Q1ZXG9
Length = 1295
Score = 151 (58.2 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 64/199 (32%), Positives = 71/199 (35%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSA-AGYGNVNNTS 468
GY Y PP SG Q G Q QS + Q Y S AG
Sbjct: 47 GY-YPPPPTSGPTQTGSTPPQQPQ--QQLQQSPHQQGGYYPPPPPSGSIQAGSTQPQQQQ 103
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
Q+ S PPP S + Q G T QP Y PQ A+ P +P
Sbjct: 104 QQQQQQSQPPHQQGGYYPPPPTSGST--QTG-STPPQPHQQ-GGYYPQSASPP---LPQQ 156
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP---GYSHSQPP 585
Q G G PPQ GY Y P Q PP YG P G Y P GY + PP
Sbjct: 157 QQQG-GYYPPPQHGY--YPPPPPQGGYY-PPPYGYDPYGPPQGGYYPPPPPYGYGYYPPP 212
Query: 586 PS-SYAQPDSGSQ--RAPP 601
P Y P S Q + PP
Sbjct: 213 PPYGYYPPPSQQQTPQQPP 231
Score = 150 (57.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 69/215 (32%), Positives = 73/215 (33%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS-- 468
Y Y QPP Q Y Q Y Y P SG Q QQ GY TS
Sbjct: 3 YPYQQPPQQ---PQQPPYQQGGY--YPPPPSGPTQTGSTPPQQPPYQQGGYYPPPPTSGP 57
Query: 469 -QEGHTPSYGAQGDSTQAP--------PPVQSSAAMGQQGYGTGQQPSPNTASYPP--QG 517
Q G TP Q Q+P PP S + QQ S PP QG
Sbjct: 58 TQTGSTPPQQPQQQLQQSPHQQGGYYPPPPPSGSIQAGSTQPQQQQQQQQQQSQPPHQQG 117
Query: 518 ATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQS---PGSAGGY 574
P PPTS S PPQ G PQ+ A+PP Q QQ P GY
Sbjct: 118 GYYPP---PPTSGSTQTGSTPPQPHQQGGYYPQS----ASPPLPQQQQQGGYYPPPQHGY 170
Query: 575 GQPGYSHS--QPPPSSYAQ--PDSGSQRAPPSNYG 605
P PPP Y P G PP YG
Sbjct: 171 YPPPPPQGGYYPPPYGYDPYGPPQGGYYPPPPPYG 205
Score = 147 (56.8 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 67/207 (32%), Positives = 73/207 (35%)
Query: 410 GYSYSQPPASGYNQQGQGYAQD-SYGGYHAPQSGYGQAAPYDQQQG-YNSAAGYGNVNNT 467
GY Y PP SG Q G Q GGY+ PQS P QQQG Y +G
Sbjct: 118 GY-YPPPPTSGSTQTGSTPPQPHQQGGYY-PQSA-SPPLPQQQQQGGYYPPPQHGYYPPP 174
Query: 468 SQEG--HTPSYG------AQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPN-TASYPPQGA 518
+G + P YG QG PPP YG PS T PPQ
Sbjct: 175 PPQGGYYPPPYGYDPYGPPQGGYYPPPPPYGYGYYPPPPPYGYYPPPSQQQTPQQPPQPQ 234
Query: 519 TQPSYGVP-PTSQSG--YG-SQVPPQSGYAGYGMPQA-QKPLANPPAYGQTQQSPGSAGG 573
SYGVP SQ Y Q PPQ PQ Q+P P Q Q P
Sbjct: 235 QLDSYGVPLQNSQQQIPYPPQQQPPQYEQQPQQPPQQPQQPQQQPQQPQQQPQLPQQPQQ 294
Query: 574 YGQPGYSHSQPPPSSYAQPDSGSQRAP 600
Q Q P QP Q+ P
Sbjct: 295 PQQQPLQQPQQPQQQPLQPQQQPQQQP 321
Score = 133 (51.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 60/205 (29%), Positives = 64/205 (31%)
Query: 410 GYSYSQPPASGYNQQGQGYAQ--DSYGGYHAPQS--GYGQAAPYDQQQGYNSAAGYGNVN 465
GY PP GY GY GGY+ P GYG P Y +
Sbjct: 169 GYYPPPPPQGGYYPPPYGYDPYGPPQGGYYPPPPPYGYGYYPPPPPYGYYPPPSQQQTPQ 228
Query: 466 NTSQEGHTPSYGA--QGDSTQAP-PPVQSSAAMGQQGYGTGQQPS-PNTASYPPQGATQ- 520
Q SYG Q Q P PP Q QQ QQP P PQ Q
Sbjct: 229 QPPQPQQLDSYGVPLQNSQQQIPYPPQQQPPQYEQQPQQPPQQPQQPQQQPQQPQQQPQL 288
Query: 521 PSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS 580
P P Q Q P Q PQ Q+P P Q Q P Q
Sbjct: 289 PQQPQQPQQQPLQQPQQPQQQPLQPQQQPQ-QQPQQQPQQQLQQQPPPLQQQQQQQQQQQ 347
Query: 581 HSQPPPSSYAQPDSGSQRAPPSNYG 605
QP P QP Q+ P N G
Sbjct: 348 QQQPQPQQQ-QPQL--QQQPQENLG 369
Score = 128 (50.1 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 63/207 (30%), Positives = 67/207 (32%)
Query: 410 GYSYSQ---PPASGYNQQGQGYA--QDSY-------GGYHAPQSGYGQAAPYDQQQGYNS 457
GY Y Q PP QQG Y Q Y GGY+ P GY P Q GY
Sbjct: 143 GY-YPQSASPPLPQQQQQGGYYPPPQHGYYPPPPPQGGYYPPPYGYDPYGP--PQGGYYP 199
Query: 458 AA---GYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYP 514
GYG G+ P Q Q P P Q + YG Q S YP
Sbjct: 200 PPPPYGYGYYPPPPPYGYYPPPSQQQTPQQPPQPQQLDS------YGVPLQNSQQQIPYP 253
Query: 515 PQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGY 574
PQ P Y P Q Q P Q PQ Q L P Q Q
Sbjct: 254 PQ-QQPPQYEQQP-QQPPQQPQQPQQQPQ----QPQQQPQLPQQPQQPQQQPLQQPQQPQ 307
Query: 575 GQPGYSHSQPPPSSYAQPDSGSQRAPP 601
QP QP QP Q+ PP
Sbjct: 308 QQPLQPQQQPQQQPQQQPQQQLQQQPP 334
Score = 97 (39.2 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 29/74 (39%), Positives = 33/74 (44%)
Query: 306 YSQQGYQARPP---TSWGT--PGAPSMQQPGY-------GYVQPGAYPGQTPQYNMSQPP 353
Y Q GY PP T G+ P P QQ GY G Q G+ P Q PQ + Q P
Sbjct: 17 YQQGGYYPPPPSGPTQTGSTPPQQPPYQQGGYYPPPPTSGPTQTGSTPPQQPQQQLQQSP 76
Query: 354 Y--GGYPSQPTPGG 365
+ GGY P P G
Sbjct: 77 HQQGGYYPPPPPSG 90
Score = 86 (35.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 28/69 (40%), Positives = 31/69 (44%)
Query: 306 YSQQGYQARPPTSWGT-----PGAPSMQQPGYGYVQPGA--YPGQTPQYNMSQPP-YGGY 357
+ Q GY PPTS T P P QQ GY Y Q + P Q Q PP +G Y
Sbjct: 114 HQQGGYYPPPPTSGSTQTGSTPPQPH-QQGGY-YPQSASPPLPQQQQQGGYYPPPQHGYY 171
Query: 358 PSQPTPGGY 366
P P GGY
Sbjct: 172 PPPPPQGGY 180
Score = 69 (29.3 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 31/137 (22%), Positives = 47/137 (34%)
Query: 4 EPQYSSDG---TPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDF 60
+P Y G P + +TPP + G+ P P PT S PP + Q
Sbjct: 14 QPPYQQGGYYPPPPSGPTQTGSTPPQQPPYQQGGYYPPPPTSGPTQTGSTPPQQPQQQLQ 73
Query: 61 QAAKRRAEQIAARL-CNSVSAEAKRPRVENGSGGFDSADK----GFSSPPSDLKSIPAPS 115
Q+ ++ S+ A + +P+ + S G+ PP S S
Sbjct: 74 QSPHQQGGYYPPPPPSGSIQAGSTQPQQQQQQQQQQSQPPHQQGGYYPPPPTSGSTQTGS 133
Query: 116 AIPVSY--GGYQSMGTS 130
P + GGY S
Sbjct: 134 TPPQPHQQGGYYPQSAS 150
Score = 61 (26.5 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 16/32 (50%), Positives = 16/32 (50%)
Query: 340 YPGQTPQYNMSQPPY--GGY----PSQPTPGG 365
YP Q P QPPY GGY PS PT G
Sbjct: 3 YPYQQPPQQPQQPPYQQGGYYPPPPSGPTQTG 34
Score = 61 (26.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 23/61 (37%), Positives = 24/61 (39%)
Query: 308 QQGYQARPPTSWGT-PGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPY--GGY-PSQPTP 363
QQ Q P G P P G QP Q Q SQPP+ GGY P PT
Sbjct: 69 QQQLQQSPHQQGGYYPPPPPSGSIQAGSTQPQQQ--QQQQQQQSQPPHQQGGYYPPPPTS 126
Query: 364 G 364
G
Sbjct: 127 G 127
>UNIPROTKB|O73932 [details] [associations]
symbol:igf2bp3-a "Insulin-like growth factor 2 mRNA-binding
protein 3-A" species:8355 "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IPI] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005783 GO:GO:0007275 GO:GO:0005634 GO:GO:0006417
GO:GO:0006355 GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003730 GO:GO:0030529 GO:GO:0051028
EMBL:AF055923 EMBL:AF064634 EMBL:BC170196 EMBL:BC170224
EMBL:BC170477 EMBL:BC170479 RefSeq:NP_001081752.1 UniGene:Xl.319
HSSP:Q9Y6M1 ProteinModelPortal:O73932 SMR:O73932 IntAct:O73932
PRIDE:O73932 GeneID:394293 KEGG:xla:394293 CTD:394293
Xenbase:XB-GENE-864935 HOVERGEN:HBG052725 KO:K13197 Uniprot:O73932
Length = 594
Score = 192 (72.6 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 66/210 (31%), Positives = 101/210 (48%)
Query: 89 NGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIE--IPNIRVGVIIGK 146
N G F S+ G PPS +P+P++ SY + S+ + IP + VG IIGK
Sbjct: 381 NALGLFPSSSSGMP-PPS--VGVPSPTS-STSYPPFGQQPESETVHLFIPALAVGAIIGK 436
Query: 147 SGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGG 206
G+ IK L +GA I++ D + R V + G PE KA+ I L E G
Sbjct: 437 QGQHIKQLSRFAGASIKIAPAEGPD--AKLRMVIITGPPEAQFKAQGRIYGKLKEENFFG 494
Query: 207 SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDT 266
+ T H +K+P+ G VIGKGG+T+ +Q T A + V+P P D
Sbjct: 495 PKEEVKLET------H--IKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP-DE 544
Query: 267 STERTVQIDGTSEQIESAKQLVNEVISENR 296
+ E V+I G + A++ + E++++ R
Sbjct: 545 NDEVVVKITGHFYASQLAQRKIQEILAQVR 574
Score = 139 (54.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 60/224 (26%), Positives = 102/224 (45%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
+P VG IIGK G TI+ + Q+ +KI + R A + + + + TPE + A ++
Sbjct: 212 VPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GAAEKPITIHSTPEGCSAACKI 269
Query: 195 INDVLA-EAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTG 251
I +++ EA+ + T + +KI NN VG +IGK G +K ++ T
Sbjct: 270 IMEIMQKEAQD-------TKFT-----EEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTD 317
Query: 252 ARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPA-------MAG 304
+I + PL + ERT+ + G+ E A++ + + I E+ + A +
Sbjct: 318 TKITISPLQ-DLTLYNPERTITVKGSIEPCAKAEEEIMKKIRESYENDIAAMNLQAHLIP 376
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYP--GQTPQ 346
G + P +S G P PS+ P +YP GQ P+
Sbjct: 377 GLNLNALGLFPSSSSGMP-PPSVGVPSP--TSSTSYPPFGQQPE 417
Score = 40 (19.1 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 15 KRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPA 54
+ YE+ + A G + + P+S + +PPP+
Sbjct: 358 RESYENDIAAMNLQAHLIPGLNLNALGLFPSSSSGMPPPS 397
>ASPGD|ASPL0000045500 [details] [associations]
symbol:AN10257 species:162425 "Emericella nidulans"
[GO:0010834 "telomere maintenance via telomere shortening"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 EMBL:BN001307 GO:GO:0003723
EnsemblFungi:CADANIAT00008760 OMA:ESENNAE Uniprot:C8VLW6
Length = 465
Score = 154 (59.3 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 61/226 (26%), Positives = 94/226 (41%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
I + +IGK GE + ++ SGAK V+ + + R + + G + +AKA L
Sbjct: 114 ISSQEAATVIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAVAKAFGL 170
Query: 195 INDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
I L + T Q+ + + IP+ +G +IGKGG I+ +Q +GAR+
Sbjct: 171 IIRTLNNEPLDAAS------TAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGARL 224
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN---RIRNPAMAGGYSQQGY 311
LP STER++ I G ++ + A V + E R PA A Y+ +
Sbjct: 225 NASDACLP---LSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPA-ASAYATRSG 280
Query: 312 QARPPTSWGTPGAPSMQQPGYG-YVQPGAYPGQTP-QYNMSQPPYG 355
G P + QP G Y P + P Q YG
Sbjct: 281 GPAGAVPGGMQVVPYVPQPAGGQYGHPDTFKRHHPGQARAGAGAYG 326
Score = 94 (38.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/187 (22%), Positives = 74/187 (39%)
Query: 102 SSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAK 161
S+ PS L+S P P S G +K+ + V+ G+ E ++ +SGA
Sbjct: 2 SASPSALQSTKRPLEDPSSPSGPNDQPEAKRPALDK----VVKGEESENNAEVKTESGAA 57
Query: 162 IQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSD 221
D + D P P+ Q I + E+ G+ +R ++
Sbjct: 58 NDA--DGQGDTVVPD-------APKGGVSETQPIQSTASHGEAAGNQSEQQRPQDESNWI 108
Query: 222 HFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQI 281
H I + + VIGKGGE + ++ +GA+ V G + ER + + G + +
Sbjct: 109 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSR--G--AVERILTVSGPQDAV 164
Query: 282 ESAKQLV 288
A L+
Sbjct: 165 AKAFGLI 171
Score = 77 (32.2 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 34/107 (31%), Positives = 42/107 (39%)
Query: 474 PSYGAQG--DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS-YGVPPTSQ 530
P+ G G D+ + P Q+ A G YG P + P A QP YG P T
Sbjct: 299 PAGGQYGHPDTFKRHHPGQARAGAG--AYGV---PYLHGQHAPAPVAPQPMHYGAPQTPY 353
Query: 531 SGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP 577
+G G P YG PQA +P P T +P GQP
Sbjct: 354 AGAGPHQPTP-----YGAPQAAQPRGGP-----TPAAPVGGAMPGQP 390
Score = 70 (29.7 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 29/83 (34%), Positives = 32/83 (38%)
Query: 301 AMAGGYSQQGYQARPPTS-WGTPGAPSMQQPGYGYVQPGAY--P---GQ------TPQ-- 346
A+ GG Y +P +G P PG GAY P GQ PQ
Sbjct: 285 AVPGGMQVVPYVPQPAGGQYGHPDTFKRHHPGQARAGAGAYGVPYLHGQHAPAPVAPQPM 344
Query: 347 -YNMSQPPYGGY-PSQPTPGGYP 367
Y Q PY G P QPTP G P
Sbjct: 345 HYGAPQTPYAGAGPHQPTPYGAP 367
Score = 38 (18.4 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 436 YHAPQSGYGQAAPY 449
Y APQ+ Y A P+
Sbjct: 346 YGAPQTPYAGAGPH 359
>UNIPROTKB|J9P7Y9 [details] [associations]
symbol:PCBP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311 CTD:5093
KO:K12889 OMA:RNISERN EMBL:AAEX03007630 RefSeq:XP_538537.1
Ensembl:ENSCAFT00000005324 GeneID:481417 KEGG:cfa:481417
Uniprot:J9P7Y9
Length = 356
Score = 182 (69.1 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 69/222 (31%), Positives = 101/222 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKRIREESGARINISEG-----NCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E + S + + +P + G +IGKGG IK ++ TGA++QV
Sbjct: 80 EE-DINSS--MTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
LP STER + I G + + E KQ+ V+ E ++P G YQ P +S
Sbjct: 137 MLP---NSTERAITIAGVPQSVTECVKQICL-VMLETLSQSPQ--GRVMTIPYQPMPASS 190
Query: 319 WGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ 360
P + Q G YP T +++ PP Y Q
Sbjct: 191 ---PVICAGGQDRCG--DAAGYPHAT--HDLEGPPLDAYSIQ 225
Score = 101 (40.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESA 284
+ IPNN +G +IG+ G I ++ +GA+I++ P + S+ R V I G++ I A
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQVTITGSAASISLA 339
Query: 285 KQLVNEVISENR 296
+ L+N +S +
Sbjct: 340 QYLINARLSSEK 351
Score = 94 (38.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ KR E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKRIREESGARI--NIS-EGNCPERIITLTGPTNAIFKAFAMIIDKLEE-DINSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ + + + I V+ E S
Sbjct: 147 TIAGVPQSVTECVKQICLVMLETLS 171
>RGD|1308032 [details] [associations]
symbol:Nova2 "neuro-oncological ventral antigen 2" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
RGD:1308032 GO:GO:0005634 GO:GO:0003723
GeneTree:ENSGT00650000093048 IPI:IPI00958388
Ensembl:ENSRNOT00000057965 Uniprot:F1M4H5
Length = 516
Score = 184 (69.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 59/218 (27%), Positives = 97/218 (44%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E + A
Sbjct: 60 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAA 119
Query: 192 EQLINDVLAEA-ESGGSGIVARRLTGQAGSDHFAMK-----IPNNKVGLVIGKGGETIKN 245
I + + E ++ V L Q + K +PN+ GL+IGKGG T+K
Sbjct: 120 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 179
Query: 246 MQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGG 305
+ ++GA +Q+ P G ER V + G EQ+ A + + + E+ + +
Sbjct: 180 VMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNIS 237
Query: 306 YSQQGYQARPPTSWGTPGA-PSMQQPGYGYVQPGAYPG 342
Y+ G+P A P+ P A G
Sbjct: 238 YANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 275
Score = 138 (53.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 36/113 (31%), Positives = 61/113 (53%)
Query: 198 VLAEAESGGSG--IVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
V A A +G +G + A +L ++ + + +P N VG ++GKGG+T+ Q TGARIQ
Sbjct: 406 VAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQ 465
Query: 256 VIPL-HLPPGDTSTERTVQIDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
+ PG + R V I G+ ++A+ L+++ ++ E +R NP G
Sbjct: 466 ISKKGEFLPG--TRNRRVTITGSPAATQAAQYLISQRVTYEQGVRASNPQKVG 516
Score = 118 (46.6 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 34/101 (33%), Positives = 53/101 (52%)
Query: 198 VLAEAESGGSGIVARRLTGQAG--SDHFA-MKIPNNKVGLVIGKGGETIKNMQARTGARI 254
++AEA S + R G G ++F + IP+ G +IGKGG+TI +Q TGA I
Sbjct: 31 LVAEALGAESFVCDERGWGGRGWEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 90
Query: 255 QVIPLH-LPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
++ PG +TER + GT+E + +A + E + E
Sbjct: 91 KLSKSKDFYPG--TTERVCLVQGTAEALNAAHSFIAEKVRE 129
Score = 46 (21.3 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 20/92 (21%), Positives = 35/92 (38%)
Query: 454 GYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASY 513
GYN+ + +N+ + G + A + A ++ G G G G +P
Sbjct: 314 GYNTNSLSLGLNSAAASGVLAAVAAGANPAAAAAANLLASYTGDAGAGPGAGAAPPPP-- 371
Query: 514 PPQGATQPSYGVPPTSQSGYGSQVPPQSGYAG 545
PP GA S+ + + G+ +G G
Sbjct: 372 PPPGALG-SFALAAAANGYLGAGAGGAAGAGG 402
>UNIPROTKB|Q5E9A3 [details] [associations]
symbol:PCBP1 "Poly(rC)-binding protein 1" species:9913 "Bos
taurus" [GO:0003697 "single-stranded DNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 GO:GO:0003697
GO:GO:0030529 GeneTree:ENSGT00550000074311 eggNOG:NOG315872
EMBL:BT021017 IPI:IPI00687560 RefSeq:NP_001015565.1 UniGene:Bt.4620
ProteinModelPortal:Q5E9A3 SMR:Q5E9A3 MINT:MINT-6732977
STRING:Q5E9A3 PRIDE:Q5E9A3 Ensembl:ENSBTAT00000011824 GeneID:509917
KEGG:bta:509917 CTD:5093 HOGENOM:HOG000182823 HOVERGEN:HBG053520
InParanoid:Q5E9A3 KO:K12889 OMA:RNISERN OrthoDB:EOG46WZ8K
NextBio:20869194 Uniprot:Q5E9A3
Length = 356
Score = 181 (68.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 69/223 (30%), Positives = 101/223 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKRIREESGARINISEG-----NCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E + S + + +P + G +IGKGG IK ++ TGA++QV
Sbjct: 80 EE-DINSS--MTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
LP STER + I G + + E KQ+ V+ E ++P G YQ P +S
Sbjct: 137 MLP---NSTERAITIAGVPQSVTECVKQICL-VMLETLSQSPQ--GRVMTIPYQPMPASS 190
Query: 319 WGTPGAPSMQQPGYGYVQPGA-YPGQTPQYNMSQPPYGGYPSQ 360
P + G A YP T +++ PP Y Q
Sbjct: 191 ------PVICAGGQDRCSDAAGYPHAT--HDLEGPPLDAYSIQ 225
Score = 101 (40.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESA 284
+ IPNN +G +IG+ G I ++ +GA+I++ P + S+ R V I G++ I A
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQVTITGSAASISLA 339
Query: 285 KQLVNEVISENR 296
+ L+N +S +
Sbjct: 340 QYLINARLSSEK 351
Score = 94 (38.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ KR E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKRIREESGARI--NIS-EGNCPERIITLTGPTNAIFKAFAMIIDKLEE-DINSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ + + + I V+ E S
Sbjct: 147 TIAGVPQSVTECVKQICLVMLETLS 171
>UNIPROTKB|Q15365 [details] [associations]
symbol:PCBP1 "Poly(rC)-binding protein 1" species:9606
"Homo sapiens" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0016071 "mRNA metabolic process" evidence=NAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0003723 GO:GO:0003697 GO:GO:0030529 GO:GO:0000398
eggNOG:NOG315872 CTD:5093 HOGENOM:HOG000182823 HOVERGEN:HBG053520
KO:K12889 OMA:RNISERN OrthoDB:EOG46WZ8K EMBL:X78137 EMBL:U24223
EMBL:Z29505 EMBL:BC039742 IPI:IPI00016610 RefSeq:NP_006187.2
UniGene:Hs.2853 PDB:1WVN PDB:1ZTG PDB:3VKE PDBsum:1WVN PDBsum:1ZTG
PDBsum:3VKE ProteinModelPortal:Q15365 SMR:Q15365 DIP:DIP-38136N
IntAct:Q15365 MINT:MINT-96267 STRING:Q15365 PhosphoSite:Q15365
DMDM:42560548 OGP:Q15365 REPRODUCTION-2DPAGE:IPI00016610
UCD-2DPAGE:Q15365 PaxDb:Q15365 PeptideAtlas:Q15365 PRIDE:Q15365
DNASU:5093 Ensembl:ENST00000303577 GeneID:5093 KEGG:hsa:5093
UCSC:uc002sgf.3 GeneCards:GC02P070314 HGNC:HGNC:8647 HPA:CAB037113
MIM:601209 neXtProt:NX_Q15365 PharmGKB:PA32986 InParanoid:Q15365
PhylomeDB:Q15365 ChiTaRS:PCBP1 EvolutionaryTrace:Q15365
GenomeRNAi:5093 NextBio:19644 ArrayExpress:Q15365 Bgee:Q15365
CleanEx:HS_PCBP1 Genevestigator:Q15365 GermOnline:ENSG00000169564
Uniprot:Q15365
Length = 356
Score = 181 (68.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 69/223 (30%), Positives = 101/223 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKRIREESGARINISEG-----NCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E + S + + +P + G +IGKGG IK ++ TGA++QV
Sbjct: 80 EE-DINSS--MTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
LP STER + I G + + E KQ+ V+ E ++P G YQ P +S
Sbjct: 137 MLP---NSTERAITIAGVPQSVTECVKQICL-VMLETLSQSPQ--GRVMTIPYQPMPASS 190
Query: 319 WGTPGAPSMQQPGYGYVQPGA-YPGQTPQYNMSQPPYGGYPSQ 360
P + G A YP T +++ PP Y Q
Sbjct: 191 ------PVICAGGQDRCSDAAGYPHAT--HDLEGPPLDAYSIQ 225
Score = 101 (40.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESA 284
+ IPNN +G +IG+ G I ++ +GA+I++ P + S+ R V I G++ I A
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQVTITGSAASISLA 339
Query: 285 KQLVNEVISENR 296
+ L+N +S +
Sbjct: 340 QYLINARLSSEK 351
Score = 94 (38.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ KR E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKRIREESGARI--NIS-EGNCPERIITLTGPTNAIFKAFAMIIDKLEE-DINSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ + + + I V+ E S
Sbjct: 147 TIAGVPQSVTECVKQICLVMLETLS 171
>MGI|MGI:1345635 [details] [associations]
symbol:Pcbp1 "poly(rC) binding protein 1" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=ISO;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=TAS] [GO:0008494 "translation activator
activity" evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=TAS] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 MGI:MGI:1345635 GO:GO:0005634
GO:GO:0006397 GO:GO:0003723 GO:GO:0008494 GO:GO:0003697
GO:GO:0030529 GeneTree:ENSGT00550000074311 eggNOG:NOG315872
CTD:5093 HOGENOM:HOG000182823 HOVERGEN:HBG053520 KO:K12889
OMA:RNISERN OrthoDB:EOG46WZ8K ChiTaRS:PCBP1 EMBL:AF139894
EMBL:AF139895 EMBL:BC069915 EMBL:BC004793 IPI:IPI00128904
RefSeq:NP_035995.1 UniGene:Mm.274146 ProteinModelPortal:P60335
SMR:P60335 IntAct:P60335 STRING:P60335 PhosphoSite:P60335
REPRODUCTION-2DPAGE:IPI00128904 REPRODUCTION-2DPAGE:P60335
PaxDb:P60335 PRIDE:P60335 Ensembl:ENSMUST00000053015 GeneID:23983
KEGG:mmu:23983 InParanoid:P60335 NextBio:303869 Bgee:P60335
CleanEx:MM_PCBP1 Genevestigator:P60335
GermOnline:ENSMUSG00000051695 Uniprot:P60335
Length = 356
Score = 181 (68.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 69/223 (30%), Positives = 101/223 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKRIREESGARINISEG-----NCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E + S + + +P + G +IGKGG IK ++ TGA++QV
Sbjct: 80 EE-DINSS--MTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
LP STER + I G + + E KQ+ V+ E ++P G YQ P +S
Sbjct: 137 MLP---NSTERAITIAGVPQSVTECVKQICL-VMLETLSQSPQ--GRVMTIPYQPMPASS 190
Query: 319 WGTPGAPSMQQPGYGYVQPGA-YPGQTPQYNMSQPPYGGYPSQ 360
P + G A YP T +++ PP Y Q
Sbjct: 191 ------PVICAGGQDRCSDAAGYPHAT--HDLEGPPLDAYSIQ 225
Score = 101 (40.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESA 284
+ IPNN +G +IG+ G I ++ +GA+I++ P + S+ R V I G++ I A
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQVTITGSAASISLA 339
Query: 285 KQLVNEVISENR 296
+ L+N +S +
Sbjct: 340 QYLINARLSSEK 351
Score = 94 (38.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ KR E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKRIREESGARI--NIS-EGNCPERIITLTGPTNAIFKAFAMIIDKLEE-DINSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ + + + I V+ E S
Sbjct: 147 TIAGVPQSVTECVKQICLVMLETLS 171
>RGD|1561319 [details] [associations]
symbol:Pcbp1 "poly(rC) binding protein 1" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1561319 GO:GO:0003723 GO:GO:0003697 OMA:RNISERN
OrthoDB:EOG46WZ8K IPI:IPI00882480 ProteinModelPortal:D3ZS68
SMR:D3ZS68 PRIDE:D3ZS68 Ensembl:ENSRNOT00000023806 UCSC:RGD:1561319
Uniprot:D3ZS68
Length = 356
Score = 181 (68.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 69/223 (30%), Positives = 101/223 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKRIREESGARINISEG-----NCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E + S + + +P + G +IGKGG IK ++ TGA++QV
Sbjct: 80 EE-DINSS--MTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
LP STER + I G + + E KQ+ V+ E ++P G YQ P +S
Sbjct: 137 MLP---NSTERAITIAGVPQSVTECVKQICL-VMLETLSQSPQ--GRVMTIPYQPMPASS 190
Query: 319 WGTPGAPSMQQPGYGYVQPGA-YPGQTPQYNMSQPPYGGYPSQ 360
P + G A YP T +++ PP Y Q
Sbjct: 191 ------PVICAGGQDRCSDAAGYPHAT--HDLEGPPLDAYSIQ 225
Score = 101 (40.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESA 284
+ IPNN +G +IG+ G I ++ +GA+I++ P + S+ R V I G++ I A
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQVTITGSAASISLA 339
Query: 285 KQLVNEVISENR 296
+ L+N +S +
Sbjct: 340 QYLINARLSSEK 351
Score = 94 (38.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ KR E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKRIREESGARI--NIS-EGNCPERIITLTGPTNAIFKAFAMIIDKLEE-DINSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ + + + I V+ E S
Sbjct: 147 TIAGVPQSVTECVKQICLVMLETLS 171
>UNIPROTKB|D4A458 [details] [associations]
symbol:Ewsr1 "Protein Ewsr1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1307258
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 IPI:IPI00767290 Ensembl:ENSRNOT00000057377
ArrayExpress:D4A458 Uniprot:D4A458
Length = 618
Score = 185 (70.2 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 71/211 (33%), Positives = 92/211 (43%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAP-YDQQQ----GYNSAAGYGNVNNTSQEG 471
++ Y+ Q AQ Y Y A P GY Q Y QQ G + Y +T+ G
Sbjct: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQSTATXG 62
Query: 472 HTP---SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
T SYG Q + P + + QGYGTG + TA+ TQ SY
Sbjct: 63 QTAYATSYG-QPPTGYTTPTAPQAYSQPVQGYGTGAYDT-TTATVT---TTQASYA---- 113
Query: 529 SQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP--GY-- 579
+QS YG+Q P Y YG P A P N PA +T Q S GGY QP GY
Sbjct: 114 AQSAYGTQ--P--AYPAYGQQPAATAPTRPQDGNKPA--ETSQPQSSTGGYNQPSLGYGQ 167
Query: 580 -SHSQPP-PSSYA-QPDSGSQRAPPSNYGAA 607
++S P P SY QP + PP++Y ++
Sbjct: 168 SNYSYPQVPGSYPMQPVTAPPSYPPTSYSSS 198
Score = 174 (66.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 70/216 (32%), Positives = 88/216 (40%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQS-GYGQA--APYDQQQGYNSAAGY---G 462
GYS Y+ P GY Q Q Y Q SYG Y P Y QA Q Y ++ G G
Sbjct: 17 GYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQSTATXGQTAYATSYGQPPTG 76
Query: 463 NVNNTSQEGHT-P--SYGAQG-DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA 518
T+ + ++ P YG D+T A ++ Q YGT QP+ YP G
Sbjct: 77 YTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT--QPA-----YPAYGQ 129
Query: 519 TQPSYGVPPTSQSGY--GSQVPPQSGYAGYGMPQ---AQKPLANPPAYGQTQQSPGSAG- 572
QP+ P Q G PQS GY P Q + P G P +A
Sbjct: 130 -QPAATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPP 188
Query: 573 GYGQPGYSHSQPPP---SSYAQPDSGSQRAPPSNYG 605
Y YS SQP SSY+Q ++ Q PS+YG
Sbjct: 189 SYPPTSYSSSQPTSYDQSSYSQQNTYGQ---PSSYG 221
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 66/206 (32%), Positives = 79/206 (38%)
Query: 418 ASGYNQQGQGYAQDSYG-GYHAPQSGYGQAAPYDQ--------QQGYNSAAGYGNVNNTS 468
A+ Y Q GY + Y P GYG A YD Q Y + + YG
Sbjct: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYGTGA-YDTTTATVTTTQASYAAQSAYGTQPAYP 125
Query: 469 QEGHTPSYGA-----QGDS-TQAPPPVQSSAAMGQQ--GYGTGQQPSPNT-ASYPPQGAT 519
G P+ A G+ + P S+ Q GYG P SYP Q T
Sbjct: 126 AYGQQPAATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVT 185
Query: 520 QP-SYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
P SY PPTS Y S P + Y Q P +YGQ QS YGQ
Sbjct: 186 APPSY--PPTS---YSSSQPTSYDQSSYSQ---QNTYGQPSSYGQ--QS-----SYGQQS 230
Query: 579 YSHSQPPPSSYAQPDSGSQRAPPSNY 604
S+ Q PP+SY P +GS PS Y
Sbjct: 231 -SYGQQPPTSYP-PQTGSYSQAPSQY 254
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 84/306 (27%), Positives = 107/306 (34%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQY-NMSQPPYGGYPSQPTP 363
GY+Q QA S+GT G P+ Y Q A GQT + QPP G Y + P
Sbjct: 28 GYAQTT-QAYGQQSYGTYGQPT--DVSYTQAQSTATXGQTAYATSYGQPPTG-YTTPTAP 83
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQP--PASGY 421
Y + + P P G
Sbjct: 84 QAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGN 143
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAA-PYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQG 480
Q S GGY+ P GYGQ+ Y Q G Y T+ PSY
Sbjct: 144 KPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPG-----SYPMQPVTAP----PSYPPTS 194
Query: 481 DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA--TQPSYGV-PPTS---QSGYG 534
S+ P S+ Q YG QPS SY Q + Q SYG PPTS Q+G
Sbjct: 195 YSSSQPTSYDQSSYSQQNTYG---QPS----SYGQQSSYGQQSSYGQQPPTSYPPQTGSY 247
Query: 535 SQVPPQSGY--AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQP 592
SQ P Q + YG Q+ +P + G Q +GG+ PG + S P + +
Sbjct: 248 SQAPSQYSQQSSSYGQ-QSSFRQDHPSSMGVYGQE---SGGFSGPGENRSLSGPDNRGRG 303
Query: 593 DSGSQR 598
G R
Sbjct: 304 RGGFDR 309
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 82/306 (26%), Positives = 99/306 (32%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP-QYNMSQPPY-GGYPSQPTPG 364
+QQGY A T+ T G Q YG G Y T Y +Q G + T
Sbjct: 14 AQQGYSAY--TAQPTQGYAQTTQ-AYGQQSYGTYGQPTDVSYTQAQSTATXGQTAYATSY 70
Query: 365 GYPGN-WDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQ 423
G P + Y +QP Y Q
Sbjct: 71 GQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG-TQPAYPAYGQ 129
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAA---PYDQQQGYNSAA-GYGNVNNTSQEGHTPSYGAQ 479
Q A PQ G A P GYN + GYG +N S SY Q
Sbjct: 130 QPAATAPTR------PQDGNKPAETSQPQSSTGGYNQPSLGYGQ-SNYSYPQVPGSYPMQ 182
Query: 480 GDSTQAPP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ- 536
APP P S ++ Y NT P Q SYG QS YG Q
Sbjct: 183 --PVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYG----QQSSYGQQP 236
Query: 537 ---VPPQSGYAGYGMPQAQKPLANPPAYGQT----QQSPGSAGGYGQPGYSHSQPPPS-S 588
PPQ+G Y +Q + +YGQ Q P S G YGQ S P + S
Sbjct: 237 PTSYPPQTG--SYSQAPSQYSQQSS-SYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRS 293
Query: 589 YAQPDS 594
+ PD+
Sbjct: 294 LSGPDN 299
>UNIPROTKB|J3QT27 [details] [associations]
symbol:PCBP3 "Poly(rC)-binding protein 3" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AJ011931 EMBL:AJ239328
EMBL:AL133492 EMBL:AL133493 EMBL:AL592528 HGNC:HGNC:8651
ChiTaRS:PCBP3 ProteinModelPortal:J3QT27 Ensembl:ENST00000400305
Uniprot:J3QT27
Length = 322
Score = 181 (68.8 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 76/233 (32%), Positives = 107/233 (45%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ N P R
Sbjct: 13 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEG-----NCPERI 66
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDH---FAMKIPNNKVGLV 235
V + G + I KA +I E I+ A S + +P ++ G +
Sbjct: 67 VTITGPTDAIFKAFAMIAYKFEE------DIINSMSNSPATSKPPVTLRLVVPASQCGSL 120
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISE 294
IGKGG IK ++ TGA++QV LP STER V I GT + I + KQ+ V+
Sbjct: 121 IGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQIC--VV-- 173
Query: 295 NRIRNPAMAGGYSQQGYQARP-PTSWGTPGAPSMQQ---PGYGYVQPGAYPGQ 343
M Y+ QG A P P +MQQ P G P A+PG+
Sbjct: 174 -------MLEAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNP-AFPGE 218
Score = 116 (45.9 bits), Expect = 0.00079, P = 0.00079
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
++ ++ IPN +G IIG+ G I ++ SGA+I++ TE S R + + GTP I
Sbjct: 245 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG---SSERQITITGTPANI 301
Query: 189 AKAEQLINDVLAEAESG 205
+ A+ LIN L +G
Sbjct: 302 SLAQYLINARLTSEVTG 318
Score = 37 (18.1 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 513 YPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYG-MPQAQKPLANPPA 560
+PP G T P++ P G ++P S M Q+ A+PPA
Sbjct: 205 FPPLGQTNPAF--P-------GEKLPLHSSEEAQNLMGQSSGLDASPPA 244
>UNIPROTKB|F1NPL3 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074311 EMBL:AADN02008174
IPI:IPI00591502 Ensembl:ENSGALT00000021483 OMA:DLNMNLS
ArrayExpress:F1NPL3 Uniprot:F1NPL3
Length = 356
Score = 180 (68.4 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 57/170 (33%), Positives = 87/170 (51%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ + P R
Sbjct: 4 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEGS-----CPERI 57
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGK 238
V + G + I KA +I L E + + +T + + +P ++ G +IGK
Sbjct: 58 VTITGPTDAIFKAFSMI--ALKFEEDINASMTNSTVTSKPPVT-LRLVVPASQCGSLIGK 114
Query: 239 GGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
GG IK ++ TGA++QV LP STER V I GT + I + KQ+
Sbjct: 115 GGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 161
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
+S ++ IPN +G IIG+ G I ++ SGA+I++ TE S R V + G+P I
Sbjct: 280 SSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEG---SAERQVTITGSPANI 336
Query: 189 AKAEQLINDVLAEAESG 205
+ A+ LIN L+ +G
Sbjct: 337 SLAQYLINARLSSEVTG 353
Score = 104 (41.7 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVS 120
+ K+ E+ AR+ ++S + R+ +G D+ K FS LK +A +
Sbjct: 33 ETVKKMREESGARI--NISEGSCPERIVTITGPTDAIFKAFSMIA--LKFEEDINASMTN 88
Query: 121 YGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE 180
+ ++ +P + G +IGK G IK ++ +GA++QV D NS R+V
Sbjct: 89 STVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVT 146
Query: 181 LMGTPEQIAKAEQLINDVLAE 201
+ GTP+ I + + I V+ E
Sbjct: 147 ISGTPDAIIQCVKQICVVMLE 167
Score = 95 (38.5 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 220 SDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSE 279
S H + IPN+ +G +IG+ G I ++ +GA+I++ + G S ER V I G+
Sbjct: 280 SSH-ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIA--NATEG--SAERQVTITGSPA 334
Query: 280 QIESAKQLVNEVIS 293
I A+ L+N +S
Sbjct: 335 NISLAQYLINARLS 348
>UNIPROTKB|F1NP95 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00650000093048 EMBL:AADN02003296
EMBL:AADN02003297 EMBL:AADN02003298 EMBL:AADN02003299
EMBL:AADN02003300 EMBL:AADN02003301 EMBL:AADN02003302
EMBL:AADN02003303 EMBL:AADN02003304 EMBL:AADN02003305
EMBL:AADN02003306 EMBL:AADN02003307 EMBL:AADN02003308
EMBL:AADN02003309 EMBL:AADN02003310 EMBL:AADN02003311
EMBL:AADN02003312 EMBL:AADN02003313 EMBL:AADN02003314
EMBL:AADN02003315 IPI:IPI00814536 Ensembl:ENSGALT00000016012
ArrayExpress:F1NP95 Uniprot:F1NP95
Length = 345
Score = 181 (68.8 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 51/170 (30%), Positives = 85/170 (50%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 95
Query: 192 EQLINDVLAE-----AESGGSGIVARRLTGQAGS-DHFAMKIPNNKVGLVIGKGGETIKN 245
I + + E A++ I+ + T + +PN+ GL+IGKGG T+K
Sbjct: 96 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKA 155
Query: 246 MQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
+ ++GA +Q+ P G ER V + G EQ A +L+ + I E+
Sbjct: 156 IMEQSGAWVQLS--QKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 203
Score = 132 (51.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
KI +PN G+IIGK G T+K + QSGA +Q+++ + +N R V + G PEQ KA
Sbjct: 134 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKA 192
Query: 192 EQLINDVLAEAESGGS--GIVARRLTGQAGSDH 222
+LI + E GS I +TG + +
Sbjct: 193 VELIIQKIQEDPQSGSCLNISYANVTGPVANSN 225
Score = 120 (47.3 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 207 SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLH-LPPGD 265
+G R TG+ G + IP+ G +IGKGG+TI +Q TGA I++ PG
Sbjct: 19 AGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG- 77
Query: 266 TSTERTVQIDGTSEQIESAKQLVNEVISE 294
+TER I GT E + + + E I E
Sbjct: 78 -TTERVCLIQGTVEALNAVHGFIAEKIRE 105
Score = 39 (18.8 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 16/47 (34%), Positives = 17/47 (36%)
Query: 544 AGYGMPQAQKPLANPPAYGQ----TQQSPGSAGGYGQPGYSHSQPPP 586
A G A ANP A T S SA G G + PPP
Sbjct: 299 AATGALAAAAASANPAAAAANLLATYASEASASGSTAGGTAPPPPPP 345
>UNIPROTKB|F1LN98 [details] [associations]
symbol:Ewsr1 "Protein Ewsr1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1307258
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 IPI:IPI00364603
Ensembl:ENSRNOT00000012634 ArrayExpress:F1LN98 Uniprot:F1LN98
Length = 656
Score = 185 (70.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 71/211 (33%), Positives = 92/211 (43%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAP-YDQQQ----GYNSAAGYGNVNNTSQEG 471
++ Y+ Q AQ Y Y A P GY Q Y QQ G + Y +T+ G
Sbjct: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQSTATXG 62
Query: 472 HTP---SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
T SYG Q + P + + QGYGTG + TA+ TQ SY
Sbjct: 63 QTAYATSYG-QPPTGYTTPTAPQAYSQPVQGYGTGAYDT-TTATVT---TTQASYA---- 113
Query: 529 SQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP--GY-- 579
+QS YG+Q P Y YG P A P N PA +T Q S GGY QP GY
Sbjct: 114 AQSAYGTQ--P--AYPAYGQQPAATAPTRPQDGNKPA--ETSQPQSSTGGYNQPSLGYGQ 167
Query: 580 -SHSQPP-PSSYA-QPDSGSQRAPPSNYGAA 607
++S P P SY QP + PP++Y ++
Sbjct: 168 SNYSYPQVPGSYPMQPVTAPPSYPPTSYSSS 198
Score = 174 (66.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 70/216 (32%), Positives = 88/216 (40%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQS-GYGQA--APYDQQQGYNSAAGY---G 462
GYS Y+ P GY Q Q Y Q SYG Y P Y QA Q Y ++ G G
Sbjct: 17 GYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQSTATXGQTAYATSYGQPPTG 76
Query: 463 NVNNTSQEGHT-P--SYGAQG-DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA 518
T+ + ++ P YG D+T A ++ Q YGT QP+ YP G
Sbjct: 77 YTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT--QPA-----YPAYGQ 129
Query: 519 TQPSYGVPPTSQSGY--GSQVPPQSGYAGYGMPQ---AQKPLANPPAYGQTQQSPGSAG- 572
QP+ P Q G PQS GY P Q + P G P +A
Sbjct: 130 -QPAATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPP 188
Query: 573 GYGQPGYSHSQPPP---SSYAQPDSGSQRAPPSNYG 605
Y YS SQP SSY+Q ++ Q PS+YG
Sbjct: 189 SYPPTSYSSSQPTSYDQSSYSQQNTYGQ---PSSYG 221
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 66/206 (32%), Positives = 79/206 (38%)
Query: 418 ASGYNQQGQGYAQDSYG-GYHAPQSGYGQAAPYDQ--------QQGYNSAAGYGNVNNTS 468
A+ Y Q GY + Y P GYG A YD Q Y + + YG
Sbjct: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYGTGA-YDTTTATVTTTQASYAAQSAYGTQPAYP 125
Query: 469 QEGHTPSYGA-----QGDS-TQAPPPVQSSAAMGQQ--GYGTGQQPSPNT-ASYPPQGAT 519
G P+ A G+ + P S+ Q GYG P SYP Q T
Sbjct: 126 AYGQQPAATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVT 185
Query: 520 QP-SYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
P SY PPTS Y S P + Y Q P +YGQ QS YGQ
Sbjct: 186 APPSY--PPTS---YSSSQPTSYDQSSYSQ---QNTYGQPSSYGQ--QS-----SYGQQS 230
Query: 579 YSHSQPPPSSYAQPDSGSQRAPPSNY 604
S+ Q PP+SY P +GS PS Y
Sbjct: 231 -SYGQQPPTSYP-PQTGSYSQAPSQY 254
Score = 135 (52.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 82/306 (26%), Positives = 99/306 (32%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP-QYNMSQPPY-GGYPSQPTPG 364
+QQGY A T+ T G Q YG G Y T Y +Q G + T
Sbjct: 14 AQQGYSAY--TAQPTQGYAQTTQ-AYGQQSYGTYGQPTDVSYTQAQSTATXGQTAYATSY 70
Query: 365 GYPGN-WDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQ 423
G P + Y +QP Y Q
Sbjct: 71 GQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG-TQPAYPAYGQ 129
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAA---PYDQQQGYNSAA-GYGNVNNTSQEGHTPSYGAQ 479
Q A PQ G A P GYN + GYG +N S SY Q
Sbjct: 130 QPAATAPTR------PQDGNKPAETSQPQSSTGGYNQPSLGYGQ-SNYSYPQVPGSYPMQ 182
Query: 480 GDSTQAPP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ- 536
APP P S ++ Y NT P Q SYG QS YG Q
Sbjct: 183 --PVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYG----QQSSYGQQP 236
Query: 537 ---VPPQSGYAGYGMPQAQKPLANPPAYGQT----QQSPGSAGGYGQPGYSHSQPPPS-S 588
PPQ+G Y +Q + +YGQ Q P S G YGQ S P + S
Sbjct: 237 PTSYPPQTG--SYSQAPSQYSQQSS-SYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRS 293
Query: 589 YAQPDS 594
+ PD+
Sbjct: 294 LSGPDN 299
Score = 120 (47.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 50/180 (27%), Positives = 65/180 (36%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
S PP S + Q Y Q SY + Q+ YGQ + Y QQ Y + YG TS T
Sbjct: 189 SYPPTSYSSSQPTSYDQSSY----SQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQT 244
Query: 474 PSYGAQGDSTQAPPPV-QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG 532
SY +QAP Q S++ GQQ PS S G + P ++S
Sbjct: 245 GSY------SQAPSQYSQQSSSYGQQSSFRQDHPS----SMGVYGQESGGFSGPGENRSL 294
Query: 533 YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQP 592
G P G G + S G GG+ +PG + P P
Sbjct: 295 SG---PDNRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGLP 351
Score = 83 (34.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 292 ISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAP-SMQQPGYGYVQPGAYPGQTPQYNMS 350
+S + ++ A G + +PPT + TP AP + QP GY GAY T +
Sbjct: 50 VSYTQAQSTATXGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGY-GTGAYDTTTATVTTT 108
Query: 351 QPPYGGYPSQPTPGGYP 367
Q Y + T YP
Sbjct: 109 QASYAAQSAYGTQPAYP 125
Score = 48 (22.0 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 4 EPQYSSDG--TPSKRKYEDQTTPPSAAARRPTG-FSAPDPAVAPTSYNSVPP 52
+PQ S+ G PS + + P P +AP P+ PTSY+S P
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAP-PSYPPTSYSSSQP 200
>UNIPROTKB|F1MS84 [details] [associations]
symbol:NOVA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GeneTree:ENSGT00650000093048 OMA:TPPEVVC
EMBL:DAAA02047389 IPI:IPI00703570 Ensembl:ENSBTAT00000017485
Uniprot:F1MS84
Length = 464
Score = 180 (68.4 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 58/218 (26%), Positives = 96/218 (44%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 192 EQLINDVLAEA-ESGGSGIVARRLTGQAGSDHFAMK-----IPNNKVGLVIGKGGETIKN 245
I + + E ++ V L Q + K +PN+ GL+IGKGG T+K
Sbjct: 68 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 127
Query: 246 MQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGG 305
+ ++GA +Q+ P G ER V + G EQ+ A + + + E+ + +
Sbjct: 128 VMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNIS 185
Query: 306 YSQQGYQARPPTSWGTPGA-PSMQQPGYGYVQPGAYPG 342
Y+ G+P A P+ P A G
Sbjct: 186 YANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 223
Score = 138 (53.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/113 (31%), Positives = 61/113 (53%)
Query: 198 VLAEAESGGSG--IVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
V A A +G +G + A +L ++ + + +P N VG ++GKGG+T+ Q TGARIQ
Sbjct: 354 VAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQ 413
Query: 256 VIPL-HLPPGDTSTERTVQIDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
+ PG + R V I G+ ++A+ L+++ ++ E +R NP G
Sbjct: 414 ISKKGEFLPG--TRNRRVTITGSPAATQAAQYLISQRVTYEQGVRASNPQKVG 464
Score = 46 (21.3 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 34/133 (25%), Positives = 48/133 (36%)
Query: 462 GNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG----YGTGQQPSPNTASYPPQG 517
G V N++ G +P Y + D A ++AA G G G G P+ A +
Sbjct: 191 GPVANSNPTG-SP-YASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPAALPA-FSGTD 247
Query: 518 ATQPSYGVPPTSQSGYGSQVPPQ--SGYAGYGMPQAQKPLANPPAYGQTQQSPGSAG--G 573
S + + GY + + A G+ A ANP A AG G
Sbjct: 248 LLAISTALNTLASYGYNTNSLGLGLNSAAASGVLAAVAAGANPAAAAAANLLASYAGEAG 307
Query: 574 YGQPGYSHSQPPP 586
G G + PPP
Sbjct: 308 AGPAGGAAPPPPP 320
>UNIPROTKB|F1SFQ4 [details] [associations]
symbol:PCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050687 "negative regulation of defense response to
virus" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0043161 GO:GO:0003723
GO:GO:0050687 GeneTree:ENSGT00550000074311 CTD:5094 KO:K13162
OMA:CVVMLEL EMBL:CU928648 RefSeq:NP_001231441.1 UniGene:Ssc.4977
Ensembl:ENSSSCT00000000294 GeneID:397665 KEGG:ssc:397665
ArrayExpress:F1SFQ4 Uniprot:F1SFQ4
Length = 353
Score = 179 (68.1 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 70/227 (30%), Positives = 104/227 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
LP STER + I G + I E KQ+ V+ E ++P G + Y+ +P +S
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQIC-VVMLETLSQSPPK--GVTIP-YRPKPSSS 189
Query: 319 WGTPGAPSMQQPGYGYVQPGA-YPGQTPQY----NMSQPPYGGYPSQ 360
P + Q Y A +P TP ++ PP Y Q
Sbjct: 190 ---PVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQ 233
Score = 121 (47.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 276 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 332
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 333 SLAQYLIN-VRLSSETGGMG 351
Score = 106 (42.4 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 205 GGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
G +G A L A + + IPN+ +G +IG+ G I ++ +GA+I++ P
Sbjct: 261 GNTGFSAG-LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PV 315
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVIS 293
+ ST+R V I G++ I A+ L+N +S
Sbjct: 316 EGSTDRQVTITGSAASISLAQYLINVRLS 344
Score = 93 (37.8 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ K+ E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKKMREESGARI--NIS-EGNCPERIITLAGPTNAIFKAFAMIIDKLEE-DISSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ I + + I V+ E S
Sbjct: 147 TIAGIPQSIIECVKQICVVMLETLS 171
Score = 38 (18.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 103 SPPSD--LKSIPAPSAIPVSYGGYQ 125
SPP + P PS+ PV + G Q
Sbjct: 173 SPPKGVTIPYRPKPSSSPVIFAGGQ 197
>UNIPROTKB|E2RCH9 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311
EMBL:AAEX03016660 Ensembl:ENSCAFT00000010991 Uniprot:E2RCH9
Length = 370
Score = 181 (68.8 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 80/249 (32%), Positives = 112/249 (44%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ N P R
Sbjct: 37 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEG-----NCPERI 90
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDH---FAMKIPNNKVGLV 235
V + G + I KA +I E I+ A S + +P ++ G +
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEE------DIINSMSNSPATSKPPVTLRLVVPASQCGSL 144
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGG IK ++ TGA++QV LP STER V I GT + I + + V+ E+
Sbjct: 145 IGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES 201
Query: 296 RIRN--------PA-----MAGG--YSQQGYQARP-PTSWGTPGAPSMQQ---PGYGYVQ 336
+ PA AGG Y+ QG A P P +MQQ P G
Sbjct: 202 PPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 337 PGAYPGQTP 345
P A+PG P
Sbjct: 262 P-AFPGTYP 269
Score = 116 (45.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
++ ++ IPN +G IIG+ G I ++ SGA+I++ TE S R + + GTP I
Sbjct: 293 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG---SSERQITITGTPANI 349
Query: 189 AKAEQLINDVLAEAESG 205
+ A+ LIN L +G
Sbjct: 350 SLAQYLINARLTSEVTG 366
Score = 43 (20.2 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 103 SPP--SDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPN 137
SPP + + P P++ PV + G Q+ + IP+
Sbjct: 201 SPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 237
Score = 40 (19.1 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 513 YPPQGATQPSY-GVPPTSQS 531
+PP G T P++ G P + S
Sbjct: 254 FPPLGQTNPAFPGTYPAALS 273
>ZFIN|ZDB-GENE-060526-113 [details] [associations]
symbol:nova1 "neuro-oncological ventral antigen 1"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 ZFIN:ZDB-GENE-060526-113 GO:GO:0003723 EMBL:BX005407
GeneTree:ENSGT00650000093048 CTD:4857 eggNOG:NOG258094
HOGENOM:HOG000007833 HOVERGEN:HBG082048 KO:K14944 OMA:FRQNNTA
EMBL:BC171495 EMBL:BC171499 IPI:IPI00487894 RefSeq:NP_001038254.1
UniGene:Dr.103261 SMR:Q1LYC7 Ensembl:ENSDART00000097684
GeneID:555590 KEGG:dre:555590 InParanoid:Q1LYC7 OrthoDB:EOG40ZQZR
NextBio:20881056 Uniprot:Q1LYC7
Length = 495
Score = 185 (70.2 bits), Expect = 9.0e-11, Sum P(3) = 9.0e-11
Identities = 68/239 (28%), Positives = 108/239 (45%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 60 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGV 119
Query: 192 EQLINDVLAEAESGGS-----GIVARRLTGQAGSDHFA-MKIPNNKVGLVIGKGGETIKN 245
I + + E I+ + T A + +PN+ GL+IGKGG T+K
Sbjct: 120 HNFIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIKQAKLIVPNSTAGLIIGKGGATVKA 179
Query: 246 MQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGG 305
+ ++GA +Q+ P G ER V + G EQ A +++ + I E+ + +
Sbjct: 180 VMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQNRKAVEIIVQKIQEDPQSSSCLNIS 237
Query: 306 YSQ-QGYQARP-PTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPY---GGYPS 359
YS G A PT G+P A S + V P A T + Q GG+P+
Sbjct: 238 YSNITGPVANSNPT--GSPFANSTE------VLPNAAAAATASTLLGQAGLAGMGGFPA 288
Score = 131 (51.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 57/222 (25%), Positives = 94/222 (42%)
Query: 90 GSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGE 149
G GGF +A S +DL +I + SYG Y + + P GV+ +
Sbjct: 282 GMGGFPAAMSSLSG--NDLLAITSALNTLASYG-YNTNTLGLGLN-PAAASGVLAAVAAS 337
Query: 150 TIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMG--TPEQIAKAEQLINDVLAEAES-GG 206
+ A + T +EA + +G + +A A N L +
Sbjct: 338 ANP--AAAAAANLLATYASEASGGGGHPAAPSLGGFSLGSLAAATGASNGYLNPSSPLVA 395
Query: 207 SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL-HLPPGD 265
S ++ + G + + +P N VG ++GKGG+T+ Q TGARIQ+ PG
Sbjct: 396 SSLLGTEKLAEGGKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPG- 454
Query: 266 TSTERTVQIDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
+ R V I G+ ++A+ L+++ I+ E +R NP G
Sbjct: 455 -TRNRKVTITGSPAATQAAQYLISQRITYEQGVRATNPQKVG 495
Score = 41 (19.5 bits), Expect = 9.0e-11, Sum P(3) = 9.0e-11
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 355 GGYPSQPTPGGY 366
GG+P+ P+ GG+
Sbjct: 360 GGHPAAPSLGGF 371
Score = 39 (18.8 bits), Expect = 9.0e-11, Sum P(3) = 9.0e-11
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 1 MADEPQYSSDGTPSKRKYEDQTTPPSAAARRPTG 34
++ PQ D + S+++ + T S+ R TG
Sbjct: 19 LSQSPQMDPDLSDSRKRPLETPTEASSTKRSNTG 52
Score = 38 (18.4 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 20/87 (22%), Positives = 31/87 (35%)
Query: 509 NT-ASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQS 567
NT ASY T G+ P + SG + V + A A+ + G +
Sbjct: 306 NTLASYGYNTNTL-GLGLNPAAASGVLAAVAASANPAAAAAANLLATYASEASGGGGHPA 364
Query: 568 PGSAGGYGQPGYSHSQPPPSSYAQPDS 594
S GG+ + + + Y P S
Sbjct: 365 APSLGGFSLGSLAAATGASNGYLNPSS 391
>UNIPROTKB|Q15366 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0005737
"cytoplasm" evidence=IDA;NAS] [GO:0016071 "mRNA metabolic process"
evidence=NAS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0050687 "negative regulation of defense response
to virus" evidence=IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032480 "negative
regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 Reactome:REACT_6900 GO:GO:0005654 GO:GO:0043161
GO:GO:0003677 Reactome:REACT_1675 GO:GO:0045087 EMBL:CH471054
GO:GO:0051607 GO:GO:0003723 GO:GO:0030529 EMBL:AC068889
GO:GO:0000398 EMBL:AC023509 GO:GO:0032480 GO:GO:0050687
eggNOG:NOG315872 HOGENOM:HOG000182823 HOVERGEN:HBG053520
EMBL:X78136 EMBL:AB188306 EMBL:AK292141 EMBL:AB208825 EMBL:BC001155
EMBL:BC071942 EMBL:BC107688 IPI:IPI00012066 IPI:IPI00216689
IPI:IPI00470509 IPI:IPI00791223 IPI:IPI00796337 PIR:S65679
RefSeq:NP_001092090.1 RefSeq:NP_001122383.1 RefSeq:NP_001122384.1
RefSeq:NP_001122385.1 RefSeq:NP_001122386.1 RefSeq:NP_005007.2
RefSeq:NP_114366.1 UniGene:Hs.546271 PDB:2AXY PDB:2JZX PDB:2P2R
PDB:2PQU PDB:2PY9 PDBsum:2AXY PDBsum:2JZX PDBsum:2P2R PDBsum:2PQU
PDBsum:2PY9 ProteinModelPortal:Q15366 SMR:Q15366 DIP:DIP-58934N
IntAct:Q15366 MINT:MINT-96192 STRING:Q15366 PhosphoSite:Q15366
DMDM:6707736 PaxDb:Q15366 PeptideAtlas:Q15366 PRIDE:Q15366
DNASU:5094 Ensembl:ENST00000359282 Ensembl:ENST00000359462
Ensembl:ENST00000439930 Ensembl:ENST00000447282
Ensembl:ENST00000546463 Ensembl:ENST00000548933
Ensembl:ENST00000552296 GeneID:5094 KEGG:hsa:5094 UCSC:uc001sdl.4
CTD:5094 GeneCards:GC12P053844 HGNC:HGNC:8648 HPA:HPA038356
MIM:601210 neXtProt:NX_Q15366 PharmGKB:PA32987 InParanoid:Q15366
KO:K13162 OMA:CVVMLEL ChiTaRS:PCBP2 EvolutionaryTrace:Q15366
GenomeRNAi:5094 NextBio:19648 ArrayExpress:Q15366 Bgee:Q15366
CleanEx:HS_PCBP2 Genevestigator:Q15366 GermOnline:ENSG00000197111
Uniprot:Q15366
Length = 365
Score = 179 (68.1 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 70/227 (30%), Positives = 104/227 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
LP STER + I G + I E KQ+ V+ E ++P G + Y+ +P +S
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQIC-VVMLETLSQSPPK--GVTIP-YRPKPSSS 189
Query: 319 WGTPGAPSMQQPGYGYVQPGA-YPGQTPQY----NMSQPPYGGYPSQ 360
P + Q Y A +P TP ++ PP Y Q
Sbjct: 190 ---PVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQ 233
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 288 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 344
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 345 SLAQYLIN-VRLSSETGGMG 363
Score = 102 (41.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 214 LTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQ 273
L A + + IPN+ +G +IG+ G I ++ +GA+I++ P + ST+R V
Sbjct: 281 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT 336
Query: 274 IDGTSEQIESAKQLVNEVIS 293
I G++ I A+ L+N +S
Sbjct: 337 ITGSAASISLAQYLINVRLS 356
Score = 93 (37.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ K+ E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKKMREESGARI--NIS-EGNCPERIITLAGPTNAIFKAFAMIIDKLEE-DISSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ I + + I V+ E S
Sbjct: 147 TIAGIPQSIIECVKQICVVMLETLS 171
>RGD|1309626 [details] [associations]
symbol:Pcbp2 "poly(rC) binding protein 2" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0050687 "negative regulation of defense response to virus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1309626 GO:GO:0003723 eggNOG:NOG315872
HOVERGEN:HBG053520 CTD:5094 KO:K13162 IPI:IPI00464805 EMBL:BC078906
RefSeq:NP_001013241.1 UniGene:Rn.106644 ProteinModelPortal:Q6AYU5
SMR:Q6AYU5 PRIDE:Q6AYU5 GeneID:363005 KEGG:rno:363005
UCSC:RGD:1309626 NextBio:682109 Genevestigator:Q6AYU5
Uniprot:Q6AYU5
Length = 365
Score = 179 (68.1 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 70/227 (30%), Positives = 104/227 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
LP STER + I G + I E KQ+ V+ E ++P G + Y+ +P +S
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQIC-VVMLETLSQSPPK--GVTIP-YRPKPSSS 189
Query: 319 WGTPGAPSMQQPGYGYVQPGA-YPGQTPQY----NMSQPPYGGYPSQ 360
P + Q Y A +P TP ++ PP Y Q
Sbjct: 190 ---PVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQ 233
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 288 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 344
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 345 SLAQYLIN-VRLSSETGGMG 363
Score = 102 (41.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 214 LTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQ 273
L A + + IPN+ +G +IG+ G I ++ +GA+I++ P + ST+R V
Sbjct: 281 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT 336
Query: 274 IDGTSEQIESAKQLVNEVIS 293
I G++ I A+ L+N +S
Sbjct: 337 ITGSAASISLAQYLINVRLS 356
Score = 93 (37.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ K+ E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKKMREESGARI--NIS-EGNCPERIITLAGPTNAIFKAFAMIIDKLEE-DISSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ I + + I V+ E S
Sbjct: 147 TIAGIPQSIIECVKQICVVMLETLS 171
>UNIPROTKB|E2QUE1 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311
OMA:FWAPSVL EMBL:AAEX03016660 Ensembl:ENSCAFT00000018912
Uniprot:E2QUE1
Length = 371
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 79/247 (31%), Positives = 112/247 (45%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ N P R
Sbjct: 37 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEG-----NCPERI 90
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDH---FAMKIPNNKVGLV 235
V + G + I KA +I E I+ A S + +P ++ G +
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEE------DIINSMSNSPATSKPPVTLRLVVPASQCGSL 144
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGG IK ++ TGA++QV LP STER V I GT + I + + V+ E+
Sbjct: 145 IGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES 201
Query: 296 RIRN--------PA-----MAGG--YSQQGYQARP-PTSWGTPGAPSMQQ---PGYGYVQ 336
+ PA AGG Y+ QG A P P +MQQ P G
Sbjct: 202 PPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 337 PGAYPGQ 343
P A+PG+
Sbjct: 262 P-AFPGE 267
Score = 116 (45.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
++ ++ IPN +G IIG+ G I ++ SGA+I++ TE S R + + GTP I
Sbjct: 294 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG---SSERQITITGTPANI 350
Query: 189 AKAEQLINDVLAEAESG 205
+ A+ LIN L +G
Sbjct: 351 SLAQYLINARLTSEVTG 367
Score = 43 (20.2 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 103 SPP--SDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPN 137
SPP + + P P++ PV + G Q+ + IP+
Sbjct: 201 SPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 237
>UNIPROTKB|P57721 [details] [associations]
symbol:PCBP3 "Poly(rC)-binding protein 3" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0016071 "mRNA metabolic process" evidence=NAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0016071
GO:GO:0003677 GO:GO:0003723 GO:GO:0030529 eggNOG:NOG315872
HOVERGEN:HBG053520 KO:K13162 EMBL:AF176329 EMBL:AK094301
EMBL:AJ011931 EMBL:AJ239328 EMBL:AL133492 EMBL:AL133493
EMBL:AL592528 EMBL:BC012061 IPI:IPI00027970 IPI:IPI00101278
IPI:IPI00167750 IPI:IPI00410586 IPI:IPI00410587
RefSeq:NP_001123613.1 RefSeq:NP_065389.2 UniGene:Hs.474049
ProteinModelPortal:P57721 SMR:P57721 IntAct:P57721
MINT:MINT-2862183 STRING:P57721 PhosphoSite:P57721 DMDM:296439262
PaxDb:P57721 PRIDE:P57721 Ensembl:ENST00000400308
Ensembl:ENST00000400309 Ensembl:ENST00000400310
Ensembl:ENST00000400314 Ensembl:ENST00000449640 GeneID:54039
KEGG:hsa:54039 UCSC:uc002zhp.2 UCSC:uc002zhq.2 UCSC:uc002zhs.2
CTD:54039 GeneCards:GC21P047063 HGNC:HGNC:8651 HPA:HPA030247
MIM:608502 neXtProt:NX_P57721 PharmGKB:PA32990 OMA:FWAPSVL
OrthoDB:EOG4XH00F ChiTaRS:PCBP3 GenomeRNAi:54039 NextBio:56330
ArrayExpress:P57721 Bgee:P57721 CleanEx:HS_PCBP3
Genevestigator:P57721 GermOnline:ENSG00000183570 Uniprot:P57721
Length = 371
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 79/247 (31%), Positives = 112/247 (45%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ N P R
Sbjct: 37 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEG-----NCPERI 90
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDH---FAMKIPNNKVGLV 235
V + G + I KA +I E I+ A S + +P ++ G +
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEE------DIINSMSNSPATSKPPVTLRLVVPASQCGSL 144
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGG IK ++ TGA++QV LP STER V I GT + I + + V+ E+
Sbjct: 145 IGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES 201
Query: 296 RIRN--------PA-----MAGG--YSQQGYQARP-PTSWGTPGAPSMQQ---PGYGYVQ 336
+ PA AGG Y+ QG A P P +MQQ P G
Sbjct: 202 PPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 337 PGAYPGQ 343
P A+PG+
Sbjct: 262 P-AFPGE 267
Score = 116 (45.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
++ ++ IPN +G IIG+ G I ++ SGA+I++ TE S R + + GTP I
Sbjct: 294 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG---SSERQITITGTPANI 350
Query: 189 AKAEQLINDVLAEAESG 205
+ A+ LIN L +G
Sbjct: 351 SLAQYLINARLTSEVTG 367
Score = 43 (20.2 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 103 SPP--SDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPN 137
SPP + + P P++ PV + G Q+ + IP+
Sbjct: 201 SPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 237
>MGI|MGI:1890470 [details] [associations]
symbol:Pcbp3 "poly(rC) binding protein 3" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 MGI:MGI:1890470 GO:GO:0005829 GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003723 GO:GO:0030529
GeneTree:ENSGT00550000074311 eggNOG:NOG315872 HOGENOM:HOG000182823
HOVERGEN:HBG053520 KO:K13162 CTD:54039 OMA:FWAPSVL
OrthoDB:EOG4XH00F ChiTaRS:PCBP3 EMBL:AF176327 EMBL:AK034811
EMBL:AK079564 IPI:IPI00411074 IPI:IPI00411075 RefSeq:NP_067543.2
UniGene:Mm.272803 ProteinModelPortal:P57722 SMR:P57722
STRING:P57722 PhosphoSite:P57722 PaxDb:P57722 PRIDE:P57722
Ensembl:ENSMUST00000001148 Ensembl:ENSMUST00000105411
Ensembl:ENSMUST00000168465 GeneID:59093 KEGG:mmu:59093
UCSC:uc007fuz.2 UCSC:uc007fva.2 InParanoid:P57722 NextBio:314746
Bgee:P57722 CleanEx:MM_PCBP3 Genevestigator:P57722
GermOnline:ENSMUSG00000001120 Uniprot:P57722
Length = 371
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 79/247 (31%), Positives = 112/247 (45%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ N P R
Sbjct: 37 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEG-----NCPERI 90
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDH---FAMKIPNNKVGLV 235
V + G + I KA +I E I+ A S + +P ++ G +
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEE------DIINSMSNSPATSKPPVTLRLVVPASQCGSL 144
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGG IK ++ TGA++QV LP STER V I GT + I + + V+ E+
Sbjct: 145 IGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES 201
Query: 296 RIRN--------PA-----MAGG--YSQQGYQARP-PTSWGTPGAPSMQQ---PGYGYVQ 336
+ PA AGG Y+ QG A P P +MQQ P G
Sbjct: 202 PPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 337 PGAYPGQ 343
P A+PG+
Sbjct: 262 P-AFPGE 267
Score = 116 (45.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
++ ++ IPN +G IIG+ G I ++ SGA+I++ TE S R + + GTP I
Sbjct: 294 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG---SSERQITITGTPANI 350
Query: 189 AKAEQLINDVLAEAESG 205
+ A+ LIN L +G
Sbjct: 351 SLAQYLINARLTSEVTG 367
Score = 43 (20.2 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 103 SPP--SDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPN 137
SPP + + P P++ PV + G Q+ + IP+
Sbjct: 201 SPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 237
>UNIPROTKB|D4A1P3 [details] [associations]
symbol:Pcbp3 "Protein Pcbp3" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
RGD:1307430 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0003723
EMBL:CH473988 OrthoDB:EOG4XH00F IPI:IPI00558998 UniGene:Rn.107537
Ensembl:ENSRNOT00000042120 Uniprot:D4A1P3
Length = 371
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 79/247 (31%), Positives = 112/247 (45%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ N P R
Sbjct: 37 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEG-----NCPERI 90
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDH---FAMKIPNNKVGLV 235
V + G + I KA +I E I+ A S + +P ++ G +
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEE------DIINSMSNSPATSKPPVTLRLVVPASQCGSL 144
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGG IK ++ TGA++QV LP STER V I GT + I + + V+ E+
Sbjct: 145 IGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES 201
Query: 296 RIRN--------PA-----MAGG--YSQQGYQARP-PTSWGTPGAPSMQQ---PGYGYVQ 336
+ PA AGG Y+ QG A P P +MQQ P G
Sbjct: 202 PPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 337 PGAYPGQ 343
P A+PG+
Sbjct: 262 P-AFPGE 267
Score = 116 (45.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
++ ++ IPN +G IIG+ G I ++ SGA+I++ TE S R + + GTP I
Sbjct: 294 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG---SSERQITITGTPANI 350
Query: 189 AKAEQLINDVLAEAESG 205
+ A+ LIN L +G
Sbjct: 351 SLAQYLINARLTSEVTG 367
Score = 43 (20.2 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 103 SPP--SDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPN 137
SPP + + P P++ PV + G Q+ + IP+
Sbjct: 201 SPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 237
>UNIPROTKB|Q9UNW9 [details] [associations]
symbol:NOVA2 "RNA-binding protein Nova-2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 EMBL:AF083898
GO:GO:0005634 GO:GO:0003723 eggNOG:NOG258094 HOGENOM:HOG000007833
HOVERGEN:HBG082048 KO:K14944 EMBL:U70477 EMBL:AC006540
IPI:IPI00156005 RefSeq:NP_002507.1 UniGene:Hs.375439 PDB:1DTJ
PDB:1EC6 PDBsum:1DTJ PDBsum:1EC6 ProteinModelPortal:Q9UNW9
SMR:Q9UNW9 STRING:Q9UNW9 PhosphoSite:Q9UNW9 DMDM:33516944
PRIDE:Q9UNW9 DNASU:4858 Ensembl:ENST00000263257 GeneID:4858
KEGG:hsa:4858 UCSC:uc002pdv.2 CTD:4858 GeneCards:GC19M046442
HGNC:HGNC:7887 HPA:HPA045607 MIM:601991 neXtProt:NX_Q9UNW9
PharmGKB:PA31689 InParanoid:Q9UNW9 OMA:TPPEVVC PhylomeDB:Q9UNW9
EvolutionaryTrace:Q9UNW9 GenomeRNAi:4858 NextBio:18718
ArrayExpress:Q9UNW9 Bgee:Q9UNW9 CleanEx:HS_NOVA2
Genevestigator:Q9UNW9 GermOnline:ENSG00000104967 Uniprot:Q9UNW9
Length = 492
Score = 180 (68.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 58/218 (26%), Positives = 96/218 (44%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
Query: 192 EQLINDVLAEA-ESGGSGIVARRLTGQAGSDHFAMK-----IPNNKVGLVIGKGGETIKN 245
I + + E ++ V L Q + K +PN+ GL+IGKGG T+K
Sbjct: 96 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 155
Query: 246 MQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGG 305
+ ++GA +Q+ P G ER V + G EQ+ A + + + E+ + +
Sbjct: 156 VMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNIS 213
Query: 306 YSQQGYQARPPTSWGTPGA-PSMQQPGYGYVQPGAYPG 342
Y+ G+P A P+ P A G
Sbjct: 214 YANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 251
Score = 138 (53.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 36/113 (31%), Positives = 61/113 (53%)
Query: 198 VLAEAESGGSG--IVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
V A A +G +G + A +L ++ + + +P N VG ++GKGG+T+ Q TGARIQ
Sbjct: 382 VAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQ 441
Query: 256 VIPL-HLPPGDTSTERTVQIDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
+ PG + R V I G+ ++A+ L+++ ++ E +R NP G
Sbjct: 442 ISKKGEFLPG--TRNRRVTITGSPAATQAAQYLISQRVTYEQGVRASNPQKVG 492
Score = 120 (47.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 212 RRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLH-LPPGDTSTER 270
R TG+ G + IP+ G +IGKGG+TI +Q TGA I++ PG +TER
Sbjct: 24 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG--TTER 81
Query: 271 TVQIDGTSEQIESAKQLVNEVISE 294
+ GT+E + + + E + E
Sbjct: 82 VCLVQGTAEALNAVHSFIAEKVRE 105
Score = 46 (21.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 34/133 (25%), Positives = 48/133 (36%)
Query: 462 GNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG----YGTGQQPSPNTASYPPQG 517
G V N++ G +P Y + D A ++AA G G G G P+ A +
Sbjct: 219 GPVANSNPTG-SP-YASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPAALPA-FSGTD 275
Query: 518 ATQPSYGVPPTSQSGYGSQVPPQ--SGYAGYGMPQAQKPLANPPAYGQTQQSPGSAG--G 573
S + + GY + + A G+ A ANP A AG G
Sbjct: 276 LLAISTALNTLASYGYNTNSLGLGLNSAAASGVLAAVAAGANPAAAAAANLLASYAGEAG 335
Query: 574 YGQPGYSHSQPPP 586
G G + PPP
Sbjct: 336 AGPAGGAAPPPPP 348
>UNIPROTKB|B4DXP5 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC068889 EMBL:AC023509
HOGENOM:HOG000182823 HOVERGEN:HBG053520 OrthoDB:EOG46WZ8K
UniGene:Hs.546271 HGNC:HGNC:8648 ChiTaRS:PCBP2 EMBL:AK302067
IPI:IPI00900327 SMR:B4DXP5 STRING:B4DXP5 Ensembl:ENST00000552819
UCSC:uc001sdf.4 Uniprot:B4DXP5
Length = 322
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 66/213 (30%), Positives = 101/213 (47%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
LP STER + I G + I E KQ+ V+ E ++P G + Y+ +P +S
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQIC-VVMLETLSQSPPK--GVTIP-YRPKPSSS 189
Query: 319 WGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQ 351
P + G Y G Y PQ ++++
Sbjct: 190 ------PVIFAGGQAYTIQGQYA--IPQPDLTK 214
Score = 121 (47.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 245 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 301
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 302 SLAQYLIN-VRLSSETGGMG 320
Score = 106 (42.4 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 205 GGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
G +G A L A + + IPN+ +G +IG+ G I ++ +GA+I++ P
Sbjct: 230 GNTGFSAG-LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PV 284
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVIS 293
+ ST+R V I G++ I A+ L+N +S
Sbjct: 285 EGSTDRQVTITGSAASISLAQYLINVRLS 313
Score = 93 (37.8 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ K+ E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKKMREESGARI--NIS-EGNCPERIITLAGPTNAIFKAFAMIIDKLEE-DISSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ I + + I V+ E S
Sbjct: 147 TIAGIPQSIIECVKQICVVMLETLS 171
Score = 43 (20.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 103 SPPSD--LKSIPAPSAIPVSYGGYQSMGTSKKIEIP 136
SPP + P PS+ PV + G Q+ + IP
Sbjct: 173 SPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIP 208
>ZFIN|ZDB-GENE-050522-157 [details] [associations]
symbol:pcbp3 "poly(rC) binding protein 3"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-050522-157 GO:GO:0003723 GeneTree:ENSGT00550000074311
EMBL:BX247868 HOVERGEN:HBG053520 IPI:IPI00868273 UniGene:Dr.159961
SMR:A8WHQ1 Ensembl:ENSDART00000148317 Uniprot:A8WHQ1
Length = 350
Score = 178 (67.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 62/178 (34%), Positives = 87/178 (48%)
Query: 114 PSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLN 173
PS + S GG T + + + VG IIGK GET+K ++ +SGA+I ++ N
Sbjct: 3 PSKVQ-SEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEG-----N 55
Query: 174 SPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDH---FAMKIPNN 230
P R V + G + I KA +I E I+ A S + +P +
Sbjct: 56 CPERIVTITGPTDAIFKAFAMIAYKFEE------DIINSMSNSPATSKPPVTLRLVVPAS 109
Query: 231 KVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
+ G +IGKGG IK M+ TGA++QV LP STER V I GT E I + KQ+
Sbjct: 110 QCGSLIGKGGSKIKEMRESTGAQVQVAGDMLP---NSTERAVTISGTPEAIIQCVKQI 164
>FB|FBgn0262737 [details] [associations]
symbol:mub "mushroom-body expressed" species:7227 "Drosophila
melanogaster" [GO:0017130 "poly(C) RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IC] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 EMBL:AE014296
GO:GO:0003723 GO:GO:0000381 GeneTree:ENSGT00550000074311 KO:K13162
EMBL:BT030417 RefSeq:NP_001163493.1 RefSeq:NP_001246873.1
UniGene:Dm.2502 SMR:A4IJ59 STRING:A4IJ59 EnsemblMetazoa:FBtr0301364
EnsemblMetazoa:FBtr0304980 GeneID:40436 KEGG:dme:Dmel_CG7437
CTD:40436 FlyBase:FBgn0262737 GenomeRNAi:40436 NextBio:818772
Uniprot:A4IJ59
Length = 557
Score = 159 (61.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 50/144 (34%), Positives = 69/144 (47%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE + + +SGAKI ++ D + P R V + GT I A LI
Sbjct: 35 VGSIIGKKGEIVNRFREESGAKINIS-----DGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMK--IPNNKVGLVIGKGGETIKNMQARTGARIQVI 257
E G+ G ++ +P ++ G +IGK G IK ++ TG IQV
Sbjct: 90 EEFND----------VGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVA 139
Query: 258 PLHLPPGDTSTERTVQIDGTSEQI 281
LP STER V + G++EQI
Sbjct: 140 SEMLP---NSTERAVTLSGSAEQI 160
Score = 107 (42.7 bits), Expect = 9.0e-08, Sum P(3) = 9.0e-08
Identities = 30/116 (25%), Positives = 50/116 (43%)
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
A A GS + +A M + N+ +G +IGKGG I ++ +GA I++
Sbjct: 265 ALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNC 324
Query: 260 HLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARP 315
G +T+RT+ I G + + A+ L+N + + A G A P
Sbjct: 325 EEREGG-NTDRTITISGNPDSVALAQYLINMSVELQKANLLEQAQSQQNGGAAAAP 379
Score = 100 (40.3 bits), Expect = 9.0e-08, Sum P(3) = 9.0e-08
Identities = 29/81 (35%), Positives = 44/81 (54%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
++ +P + G +IGKSG IK ++ +G IQV +E NS R+V L G+ EQI +
Sbjct: 106 RLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVA--SEMLPNSTERAVTLSGSAEQITQC 163
Query: 192 EQLINDVLAEAESGGSGIVAR 212
I V+ E+ G+ I R
Sbjct: 164 IYQICLVMLESPPRGATIPYR 184
Score = 70 (29.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 22/68 (32%), Positives = 27/68 (39%)
Query: 514 PPQGATQPSYGVPPTSQS---GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGS 570
PP+GAT P P + G Q YA A+ PLA+ A G +P S
Sbjct: 175 PPRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPAS 234
Query: 571 AGGYGQPG 578
GG G
Sbjct: 235 TGGINHTG 242
Score = 38 (18.4 bits), Expect = 9.0e-08, Sum P(3) = 9.0e-08
Identities = 19/64 (29%), Positives = 23/64 (35%)
Query: 442 GYGQAAPYDQQQGYNSAAGYGNVNNT-SQEGHTPSYGAQ------GDSTQAPPPVQSSAA 494
G G A G N AA G N T S G+ + G Q G + A + S A
Sbjct: 416 GAGAAGAAGVANGANPAANGGGSNGTISATGYASANGGQATNGSVGVNPAAAAALSSPLA 475
Query: 495 MGQQ 498
Q
Sbjct: 476 SALQ 479
>UNIPROTKB|D3DS81 [details] [associations]
symbol:NOVA1 "Neuro-oncological ventral antigen 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723 EMBL:CH471078
RefSeq:NP_006480.2 UniGene:Hs.31588 GeneID:4857 KEGG:hsa:4857
CTD:4857 HGNC:HGNC:7886 HOGENOM:HOG000007833 KO:K14944
ChiTaRS:NOVA1 GenomeRNAi:4857 NextBio:18710 EMBL:AL079343
EMBL:AL132716 IPI:IPI00956017 SMR:D3DS81 Ensembl:ENST00000465357
UCSC:uc001wpz.3 Uniprot:D3DS81
Length = 483
Score = 181 (68.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 51/170 (30%), Positives = 85/170 (50%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
Query: 192 EQLINDVLAE-----AESGGSGIVARRLTGQAGS-DHFAMKIPNNKVGLVIGKGGETIKN 245
I + + E A++ I+ + T + +PN+ GL+IGKGG T+K
Sbjct: 113 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKA 172
Query: 246 MQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
+ ++GA +Q+ P G ER V + G EQ A +L+ + I E+
Sbjct: 173 VMEQSGAWVQLS--QKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 220
Score = 131 (51.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
KI +PN G+IIGK G T+K + QSGA +Q+++ + +N R V + G PEQ KA
Sbjct: 151 KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKA 209
Query: 192 EQLINDVLAEAESGGS--GIVARRLTGQAGSDH 222
+LI + E GS I +TG + +
Sbjct: 210 VELIIQKIQEDPQSGSCLNISYANVTGPVANSN 242
Score = 128 (50.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 45/154 (29%), Positives = 67/154 (43%)
Query: 158 SGAKIQVTRDTEADLNSPTRSVELMGTPE--QIAKAEQLINDVLAEAES-GGSGIVARRL 214
+ A + T +EA + T GT +A A N A S I+
Sbjct: 333 AAANLLATYASEASASGSTAG-GTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEK 391
Query: 215 TGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSTERTVQ 273
+ D + +P N VG ++GKGG+T+ Q TGARIQ+ PG + R V
Sbjct: 392 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG--TRNRKVT 449
Query: 274 IDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
I GT ++A+ L+ + I+ E +R NP G
Sbjct: 450 ITGTPAATQAAQYLITQRITYEQGVRAANPQKVG 483
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 207 SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLH-LPPGD 265
+G R TG+ G + IP+ G +IGKGG+TI +Q TGA I++ PG
Sbjct: 36 AGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG- 94
Query: 266 TSTERTVQIDGTSEQIESAKQLVNEVISE 294
+TER I GT E + + + E I E
Sbjct: 95 -TTERVCLIQGTVEALNAVHGFIAEKIRE 122
Score = 40 (19.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 276 GTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQ 312
GT + + +K +V + EN + GG + YQ
Sbjct: 388 GTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQ 424
>RGD|1307430 [details] [associations]
symbol:Pcbp3 "poly(rC) binding protein 3" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1307430 GO:GO:0003723
GeneTree:ENSGT00550000074311 eggNOG:NOG315872 HOGENOM:HOG000182823
HOVERGEN:HBG053520 KO:K13162 CTD:54039 UniGene:Rn.107537
EMBL:BC079196 IPI:IPI00464574 RefSeq:NP_001011945.1 SMR:Q6AY48
IntAct:Q6AY48 MINT:MINT-7138861 Ensembl:ENSRNOT00000001675
GeneID:294336 KEGG:rno:294336 NextBio:638024 Genevestigator:Q6AY48
Uniprot:Q6AY48
Length = 319
Score = 177 (67.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 79/246 (32%), Positives = 111/246 (45%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ N P R
Sbjct: 5 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEG-----NCPERI 58
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDH---FAMKIPNNKVGLV 235
V + G + I KA +I E I+ A S + +P ++ G +
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEE------DIINSMSNSPATSKPPVTLRLVVPASQCGSL 112
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IGKGG IK ++ TGA++QV LP STER V I GT + I + + V+ E+
Sbjct: 113 IGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES 169
Query: 296 RIRN--------PA-----MAGG--YSQQGYQARP-PTSWGTPGAPSMQQ---PGYGYVQ 336
+ PA AGG Y+ QG A P P +MQQ P G
Sbjct: 170 PPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 229
Query: 337 PGAYPG 342
P A+PG
Sbjct: 230 P-AFPG 234
Score = 116 (45.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
++ ++ IPN +G IIG+ G I ++ SGA+I++ TE S R + + GTP I
Sbjct: 242 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG---SSERQITITGTPANI 298
Query: 189 AKAEQLINDVLAEAESG 205
+ A+ LIN L +G
Sbjct: 299 SLAQYLINARLTSEVTG 315
Score = 43 (20.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 103 SPP--SDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPN 137
SPP + + P P++ PV + G Q+ + IP+
Sbjct: 169 SPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 205
Score = 39 (18.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 513 YPPQGATQPSY-GV---PPTS 529
+PP G T P++ G+ PP S
Sbjct: 222 FPPLGQTNPAFPGLDASPPAS 242
>ZFIN|ZDB-GENE-070424-78 [details] [associations]
symbol:zgc:162999 "zgc:162999" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
Pfam:PF13014 PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-070424-78
GO:GO:0003723 eggNOG:NOG315872 HOGENOM:HOG000182823
HOVERGEN:HBG053520 KO:K13162 EMBL:BC135088 IPI:IPI00845944
RefSeq:NP_001083021.1 UniGene:Dr.122660 ProteinModelPortal:A4IGG5
SMR:A4IGG5 PRIDE:A4IGG5 GeneID:100038772 KEGG:dre:100038772
NextBio:20788560 Bgee:A4IGG5 Uniprot:A4IGG5
Length = 350
Score = 178 (67.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 57/152 (37%), Positives = 77/152 (50%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GET+K ++ +S A+I V+ N P R V + G + I KA +I
Sbjct: 27 VGSIIGKKGETVKKMREESSARINVSEG-----NCPERIVTITGPTDAIFKAFAMIAYKF 81
Query: 200 AEAESGGSGIVARRLTGQAGSDH---FAMKIPNNKVGLVIGKGGETIKNMQARTGARIQV 256
E I+ QA S + +P ++ G +IGKGG IK M+ TGA++QV
Sbjct: 82 EE------DIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV 135
Query: 257 IPLHLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
LP STER V I GT E I + KQ+
Sbjct: 136 AGDMLP---NSTERAVTISGTPEAIIQCVKQI 164
Score = 110 (43.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 126 SMGTSK-----KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE 180
S TSK ++ +P + G +IGK G IK ++ +GA++QV D NS R+V
Sbjct: 92 SQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLP--NSTERAVT 149
Query: 181 LMGTPEQIAKAEQLINDVLAEAESGGSGIVAR 212
+ GTPE I + + I V+ E+ G+ I R
Sbjct: 150 ISGTPEAIIQCVKQICVVMLESPPKGATIPYR 181
Score = 92 (37.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 215 TGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQI 274
+ QA S H + IPN+ +G +IG+ G I ++ +GA+I++ + G S++R + I
Sbjct: 263 SSQA-STH-ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA--NAMEG--SSDRQITI 316
Query: 275 DGTSEQIESAKQLVN 289
GT I A+ L+N
Sbjct: 317 TGTPANISLAQYLIN 331
Score = 40 (19.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 514 PPQGATQPSYGVPPTSQSGY-GSQV 537
PP+GAT P P T+ + G QV
Sbjct: 172 PPKGATIPYRPKPATAPVIFSGGQV 196
>RGD|621345 [details] [associations]
symbol:Nova1 "neuro-oncological ventral antigen 1" species:10116
"Rattus norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621345 GO:GO:0005634 GO:GO:0007399 GO:GO:0003723
eggNOG:NOG258094 HOGENOM:HOG000007833 HOVERGEN:HBG082048
EMBL:AY262017 IPI:IPI00331877 UniGene:Rn.232418
ProteinModelPortal:Q80WA4 SMR:Q80WA4 PRIDE:Q80WA4 UCSC:RGD:621345
ArrayExpress:Q80WA4 Genevestigator:Q80WA4 Uniprot:Q80WA4
Length = 474
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 51/170 (30%), Positives = 85/170 (50%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 52 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 111
Query: 192 EQLINDVLAE-----AESGGSGIVARRLTGQAGS-DHFAMKIPNNKVGLVIGKGGETIKN 245
I + + E A++ I+ + T + +PN+ GL+IGKGG T+K
Sbjct: 112 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKA 171
Query: 246 MQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
+ ++GA +Q+ P G ER V + G EQ A +L+ + I E+
Sbjct: 172 IMEQSGAWVQLS--QKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 219
Score = 132 (51.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
KI +PN G+IIGK G T+K + QSGA +Q+++ + +N R V + G PEQ KA
Sbjct: 150 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKA 208
Query: 192 EQLINDVLAEAESGGS--GIVARRLTGQAGSDH 222
+LI + E GS I +TG + +
Sbjct: 209 VELIIQKIQEDPQSGSCLNISYANVTGPVANSN 241
Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
Identities = 42/146 (28%), Positives = 64/146 (43%)
Query: 158 SGAKIQVTRDTEADLNSPTRSVELMGTPE--QIAKAEQLINDVLAEAES-GGSGIVARRL 214
+ A + T +EA + T GT +A A N A S I+
Sbjct: 332 AAANLLATYASEASASGSTAG-GTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEK 390
Query: 215 TGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSTERTVQ 273
+ D + +P N VG ++GKGG+T+ Q TGARIQ+ PG + R V
Sbjct: 391 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG--TRNRKVT 448
Query: 274 IDGTSEQIESAKQLVNEVIS-ENRIR 298
I GT ++A+ L+ + I+ E +R
Sbjct: 449 ITGTPAATQAAQYLITQRITYEQGVR 474
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 207 SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLH-LPPGD 265
+G R TG+ G + IP+ G +IGKGG+TI +Q TGA I++ PG
Sbjct: 35 AGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG- 93
Query: 266 TSTERTVQIDGTSEQIESAKQLVNEVISE 294
+TER I GT E + + + E I E
Sbjct: 94 -TTERVCLIQGTIEALNAVHGFIAEKIRE 121
Score = 40 (19.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 276 GTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQ 312
GT + + +K +V + EN + GG + YQ
Sbjct: 387 GTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQ 423
>UNIPROTKB|F1LMZ7 [details] [associations]
symbol:Nova1 "RNA-binding protein Nova-1" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621345 GO:GO:0003723 IPI:IPI00331877
Ensembl:ENSRNOT00000044527 ArrayExpress:F1LMZ7 Uniprot:F1LMZ7
Length = 474
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 51/170 (30%), Positives = 85/170 (50%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 52 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 111
Query: 192 EQLINDVLAE-----AESGGSGIVARRLTGQAGS-DHFAMKIPNNKVGLVIGKGGETIKN 245
I + + E A++ I+ + T + +PN+ GL+IGKGG T+K
Sbjct: 112 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKA 171
Query: 246 MQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
+ ++GA +Q+ P G ER V + G EQ A +L+ + I E+
Sbjct: 172 IMEQSGAWVQLS--QKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 219
Score = 132 (51.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
KI +PN G+IIGK G T+K + QSGA +Q+++ + +N R V + G PEQ KA
Sbjct: 150 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKA 208
Query: 192 EQLINDVLAEAESGGS--GIVARRLTGQAGSDH 222
+LI + E GS I +TG + +
Sbjct: 209 VELIIQKIQEDPQSGSCLNISYANVTGPVANSN 241
Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
Identities = 42/146 (28%), Positives = 64/146 (43%)
Query: 158 SGAKIQVTRDTEADLNSPTRSVELMGTPE--QIAKAEQLINDVLAEAES-GGSGIVARRL 214
+ A + T +EA + T GT +A A N A S I+
Sbjct: 332 AAANLLATYASEASASGSTAG-GTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEK 390
Query: 215 TGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSTERTVQ 273
+ D + +P N VG ++GKGG+T+ Q TGARIQ+ PG + R V
Sbjct: 391 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG--TRNRKVT 448
Query: 274 IDGTSEQIESAKQLVNEVIS-ENRIR 298
I GT ++A+ L+ + I+ E +R
Sbjct: 449 ITGTPAATQAAQYLITQRITYEQGVR 474
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 207 SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLH-LPPGD 265
+G R TG+ G + IP+ G +IGKGG+TI +Q TGA I++ PG
Sbjct: 35 AGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG- 93
Query: 266 TSTERTVQIDGTSEQIESAKQLVNEVISE 294
+TER I GT E + + + E I E
Sbjct: 94 -TTERVCLIQGTIEALNAVHGFIAEKIRE 121
Score = 40 (19.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 276 GTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQ 312
GT + + +K +V + EN + GG + YQ
Sbjct: 387 GTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQ 423
>UNIPROTKB|F8VXH9 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC068889 EMBL:AC023509
HGNC:HGNC:8648 ChiTaRS:PCBP2 IPI:IPI01022190
ProteinModelPortal:F8VXH9 SMR:F8VXH9 Ensembl:ENST00000550520
ArrayExpress:F8VXH9 Bgee:F8VXH9 Uniprot:F8VXH9
Length = 160
Score = 158 (60.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 48/144 (33%), Positives = 71/144 (49%)
Query: 145 GKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAES 204
GK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L E S
Sbjct: 22 GKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKLEEDIS 76
Query: 205 GGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
+ + +P ++ G +IGKGG IK ++ TGA++QV LP
Sbjct: 77 SS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP-- 131
Query: 265 DTSTERTVQIDGTSEQI-ESAKQL 287
STER + I G + I E KQ+
Sbjct: 132 -NSTERAITIAGIPQSIIECVKQI 154
>MGI|MGI:99960 [details] [associations]
symbol:Ewsr1 "Ewing sarcoma breakpoint region 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015030 "Cajal body" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50096
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
MGI:MGI:99960 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0046872 EMBL:CH466574
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
eggNOG:NOG240581 GeneTree:ENSGT00530000063105 CTD:2130
HOVERGEN:HBG000970 KO:K13209 OrthoDB:EOG42NJ15 EMBL:X79233
EMBL:AK019460 EMBL:AK151625 EMBL:AL645845 IPI:IPI00742310
PIR:A55726 RefSeq:NP_031994.2 UniGene:Mm.142822
ProteinModelPortal:Q61545 SMR:Q61545 IntAct:Q61545 STRING:Q61545
PhosphoSite:Q61545 PaxDb:Q61545 PRIDE:Q61545
Ensembl:ENSMUST00000079949 GeneID:14030 KEGG:mmu:14030
NextBio:284964 Bgee:Q61545 CleanEx:MM_EWSR1 Genevestigator:Q61545
GermOnline:ENSMUSG00000009079 Uniprot:Q61545
Length = 655
Score = 182 (69.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 74/213 (34%), Positives = 91/213 (42%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAP-YDQQQ----GYNSAAGYGNVNNTSQEG 471
++ Y+ Q AQ Y Y A P GY Q Y QQ G + Y T+ G
Sbjct: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG 62
Query: 472 HTP---SYGAQ--GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
T SYG G ST P S QGYGTG S TA+ TQ SY
Sbjct: 63 QTAYATSYGQPPTGYSTPTAPQAYSQPV---QGYGTGTYDS-TTATVT---TTQASYA-- 113
Query: 527 PTSQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP--GY 579
+Q+ YG+Q P Y YG P A P N PA +T Q S GGY QP GY
Sbjct: 114 --AQTAYGTQ--P--AYPTYGQQPTATAPTRPQDGNKPA--ETSQPQSSTGGYNQPSLGY 165
Query: 580 ---SHSQPP-PSSYA-QPDSGSQRAPPSNYGAA 607
++S P P SY QP + PP++Y ++
Sbjct: 166 GQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSS 198
Score = 178 (67.7 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 74/221 (33%), Positives = 86/221 (38%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
GYS Y+ P GY Q Q Y Q SYG Y P Y Q Q + A YG +
Sbjct: 17 GYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTD-----VSYTQAQ---TTATYGQTAYAT 68
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQG--ATQPSYGVP 526
G P+ G ST P S QGYGTG S Q A Q +YG
Sbjct: 69 SYGQPPT----GYSTPTAPQAYSQPV---QGYGTGTYDSTTATVTTTQASYAAQTAYGTQ 121
Query: 527 PTSQSGYGSQ----VP--PQSGY--AGYGMPQAQKPLANPPA--YGQTQQS-PGSAGGY- 574
P + YG Q P PQ G A PQ+ N P+ YGQ+ S P G Y
Sbjct: 122 PAYPT-YGQQPTATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP 180
Query: 575 -----GQPGY---SHSQPPPSSYAQPDSGSQRA--PPSNYG 605
P Y S+S P+SY Q Q PS+YG
Sbjct: 181 MQPVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYG 221
Score = 162 (62.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 64/197 (32%), Positives = 76/197 (38%)
Query: 413 YSQPPA-SGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNN--TSQ 469
YS P A Y+Q QGY +Y A + QA+ Y Q Y + Y T+
Sbjct: 77 YSTPTAPQAYSQPVQGYGTGTYDSTTATVTTT-QAS-YAAQTAYGTQPAYPTYGQQPTAT 134
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNT-ASYPPQGATQP-SYGVPP 527
P G + T P GYG P SYP Q T P SY PP
Sbjct: 135 APTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSY--PP 192
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPS 587
TS Y S P + Y Q P +YGQ QS YGQ S+ Q PP+
Sbjct: 193 TS---YSSSQPTSYDQSSYSQ---QNTYGQPSSYGQ--QS-----SYGQQS-SYGQQPPT 238
Query: 588 SYAQPDSGSQRAPPSNY 604
SY P +GS PS Y
Sbjct: 239 SYP-PQTGSYSQAPSQY 254
Score = 138 (53.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 82/306 (26%), Positives = 99/306 (32%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP-QYNMSQPP--YGGYPSQPTP 363
+QQGY A T+ T G Q YG G Y T Y +Q YG +
Sbjct: 14 AQQGYSAY--TAQPTQGYAQTTQ-AYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSY 70
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQ 423
G P + Y +QP Y Q
Sbjct: 71 GQPPTGYSTPTAPQAYSQPVQGYGTGTYDSTTATVTTTQASYAAQTAYG-TQPAYPTYGQ 129
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAA---PYDQQQGYNSAA-GYGNVNNTSQEGHTPSYGAQ 479
Q A PQ G A P GYN + GYG +N S SY Q
Sbjct: 130 QPTATAPTR------PQDGNKPAETSQPQSSTGGYNQPSLGYGQ-SNYSYPQVPGSYPMQ 182
Query: 480 GDSTQAPP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ- 536
APP P S ++ Y NT P Q SYG QS YG Q
Sbjct: 183 --PVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYG----QQSSYGQQP 236
Query: 537 ---VPPQSGYAGYGMPQAQKPLANPPAYGQT----QQSPGSAGGYGQPGYSHSQPPPS-S 588
PPQ+G Y +Q + +YGQ Q P S G YGQ S P + S
Sbjct: 237 PTSYPPQTG--SYSQAPSQYSQQSS-SYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRS 293
Query: 589 YAQPDS 594
+ PD+
Sbjct: 294 LSGPDN 299
Score = 120 (47.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 50/180 (27%), Positives = 70/180 (38%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
S PP S + Q Y Q SY + Q+ YGQ + Y QQ Y + YG TS T
Sbjct: 189 SYPPTSYSSSQPTSYDQSSY----SQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQT 244
Query: 474 PSYGAQGDSTQAPPPV-QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG 532
SY +QAP Q S++ GQQ PS + Y + G S SG
Sbjct: 245 GSY------SQAPSQYSQQSSSYGQQSSFRQDHPS-SMGVYGQESGGFSGPG-ENRSLSG 296
Query: 533 YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQP 592
++ + G+ GM + + G+ G GG+ +PG + P P
Sbjct: 297 PDNRGRGRGGFDRGGMSRGGR------GGGRGGLGAGERGGFNKPGGPMDEGPDLDLGLP 350
Score = 82 (33.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 22/66 (33%), Positives = 27/66 (40%)
Query: 306 YSQQGYQA---RPPTSWGTPGAP-SMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP 361
Y Q Y +PPT + TP AP + QP GY G Y T +Q Y +
Sbjct: 61 YGQTAYATSYGQPPTGYSTPTAPQAYSQPVQGY-GTGTYDSTTATVTTTQASYAAQTAYG 119
Query: 362 TPGGYP 367
T YP
Sbjct: 120 TQPAYP 125
Score = 48 (22.0 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 4 EPQYSSDG--TPSKRKYEDQTTPPSAAARRPTG-FSAPDPAVAPTSYNSVPP 52
+PQ S+ G PS + + P P +AP P+ PTSY+S P
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAP-PSYPPTSYSSSQP 200
Score = 43 (20.2 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 21 QTTPPSAAARRPTGFSAPDPAVAPTSYN 48
QT ++ + PTG+S P AP +Y+
Sbjct: 63 QTAYATSYGQPPTGYSTP---TAPQAYS 87
>UNIPROTKB|F1RM28 [details] [associations]
symbol:NOVA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GeneTree:ENSGT00650000093048 OMA:TPPEVVC
EMBL:FP102597 Ensembl:ENSSSCT00000003434 Uniprot:F1RM28
Length = 554
Score = 180 (68.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 58/218 (26%), Positives = 96/218 (44%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 98 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 157
Query: 192 EQLINDVLAEA-ESGGSGIVARRLTGQAGSDHFAMK-----IPNNKVGLVIGKGGETIKN 245
I + + E ++ V L Q + K +PN+ GL+IGKGG T+K
Sbjct: 158 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 217
Query: 246 MQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGG 305
+ ++GA +Q+ P G ER V + G EQ+ A + + + E+ + +
Sbjct: 218 VMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNIS 275
Query: 306 YSQQGYQARPPTSWGTPGA-PSMQQPGYGYVQPGAYPG 342
Y+ G+P A P+ P A G
Sbjct: 276 YANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 313
Score = 138 (53.6 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 36/113 (31%), Positives = 61/113 (53%)
Query: 198 VLAEAESGGSG--IVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
V A A +G +G + A +L ++ + + +P N VG ++GKGG+T+ Q TGARIQ
Sbjct: 444 VAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQ 503
Query: 256 VIPL-HLPPGDTSTERTVQIDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
+ PG + R V I G+ ++A+ L+++ ++ E +R NP G
Sbjct: 504 ISKKGEFLPG--TRNRRVTITGSPAATQAAQYLISQRVTYEQGVRASNPQKVG 554
Score = 120 (47.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 212 RRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLH-LPPGDTSTER 270
R TG+ G + IP+ G +IGKGG+TI +Q TGA I++ PG +TER
Sbjct: 86 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG--TTER 143
Query: 271 TVQIDGTSEQIESAKQLVNEVISE 294
+ GT+E + + + E + E
Sbjct: 144 VCLVQGTAEALNAVHSFIAEKVRE 167
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/133 (25%), Positives = 48/133 (36%)
Query: 462 GNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG----YGTGQQPSPNTASYPPQG 517
G V N++ G +P Y + D A ++AA G G G G P+ A +
Sbjct: 281 GPVANSNPTG-SP-YASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPAALPA-FSGTD 337
Query: 518 ATQPSYGVPPTSQSGYGSQVPPQ--SGYAGYGMPQAQKPLANPPAYGQTQQSPGSAG--G 573
S + + GY + + A G+ A ANP A AG G
Sbjct: 338 LLAISTALNTLASYGYNTNSLGLGLNSAAASGVLAAVAAGANPAAAAAANLLASYAGEAG 397
Query: 574 YGQPGYSHSQPPP 586
G G + PPP
Sbjct: 398 AGPAGGAAPPPPP 410
>UNIPROTKB|I3LEC2 [details] [associations]
symbol:PCBP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GO:GO:0003697 GeneTree:ENSGT00550000074311 KO:K12889
OMA:RNISERN EMBL:CU928518 RefSeq:XP_003125105.1
Ensembl:ENSSSCT00000028976 GeneID:100511501 KEGG:ssc:100511501
Uniprot:I3LEC2
Length = 356
Score = 176 (67.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 59/180 (32%), Positives = 87/180 (48%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKRIREESGARINISEG-----NCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E + S + + +P + G +IGKGG IK ++ TGA++QV
Sbjct: 80 EE-DINSS--MTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
LP STER + I G + + E KQ+ V+ E ++P G YQ P +S
Sbjct: 137 MLP---NSTERAITIAGVPQSVTECVKQICL-VMLETLSQSPQ--GRVMTIPYQPMPASS 190
Score = 101 (40.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESA 284
+ IPNN +G +IG+ G I ++ +GA+I++ P + S+ R V I G++ I A
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQVTITGSAASISLA 339
Query: 285 KQLVNEVISENR 296
+ L+N +S +
Sbjct: 340 QYLINARLSSEK 351
Score = 94 (38.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ KR E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKRIREESGARI--NIS-EGNCPERIITLTGPTNAIFKAFAMIIDKLEE-DINSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ + + + I V+ E S
Sbjct: 147 TIAGVPQSVTECVKQICLVMLETLS 171
Score = 42 (19.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 452 QQGYNSAAGYGNVNNTSQEGHTP--SYGAQGDSTQAP 486
Q + AAGY + + EG TP +Y QG T +P
Sbjct: 198 QDRCSDAAGYPHATH-DLEG-TPLDAYSIQGQHTISP 232
>UNIPROTKB|F8VZX2 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC068889 EMBL:AC023509
HGNC:HGNC:8648 ChiTaRS:PCBP2 IPI:IPI01021216
ProteinModelPortal:F8VZX2 SMR:F8VZX2 Ensembl:ENST00000549863
ArrayExpress:F8VZX2 Bgee:F8VZX2 Uniprot:F8VZX2
Length = 321
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 55/162 (33%), Positives = 81/162 (50%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNP 300
LP STER + I G + I E KQ+ V+ E ++P
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQIC-VVMLETLSQSP 174
Score = 121 (47.7 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 244 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 300
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 301 SLAQYLIN-VRLSSETGGMG 319
Score = 102 (41.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 214 LTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQ 273
L A + + IPN+ +G +IG+ G I ++ +GA+I++ P + ST+R V
Sbjct: 237 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT 292
Query: 274 IDGTSEQIESAKQLVNEVIS 293
I G++ I A+ L+N +S
Sbjct: 293 ITGSAASISLAQYLINVRLS 312
Score = 93 (37.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ K+ E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKKMREESGARI--NIS-EGNCPERIITLAGPTNAIFKAFAMIIDKLEE-DISSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAES 204
+ G P+ I + + I V+ E S
Sbjct: 147 TIAGIPQSIIECVKQICVVMLETLS 171
Score = 38 (18.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 103 SPPSD--LKSIPAPSAIPVSYGGYQ 125
SPP + P PS+ PV + G Q
Sbjct: 173 SPPKGVTIPYRPKPSSSPVIFAGGQ 197
>UNIPROTKB|B4DLC0 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 EMBL:AC068889
EMBL:AC023509 HOVERGEN:HBG053520 HGNC:HGNC:8648 ChiTaRS:PCBP2
EMBL:AK296930 IPI:IPI01009186 SMR:B4DLC0 STRING:B4DLC0
Ensembl:ENST00000541275 UCSC:uc010soh.1 Uniprot:B4DLC0
Length = 301
Score = 174 (66.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 52/149 (34%), Positives = 75/149 (50%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
LP STER + I G + I E KQ+
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQI 162
>WB|WBGene00006565 [details] [associations]
symbol:tfg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0043652 "engulfment of
apoptotic cell" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008361
"regulation of cell size" evidence=IMP] [GO:0001558 "regulation of
cell growth" evidence=IMP] [GO:0040014 "regulation of multicellular
organism growth" evidence=IMP] [GO:0070971 "endoplasmic reticulum
exit site" evidence=IDA] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0032527 "protein exit from endoplasmic reticulum"
evidence=IMP] [GO:0070973 "protein localization to endoplasmic
reticulum exit site" evidence=IMP] [GO:0043621 "protein
self-association" evidence=IMP] InterPro:IPR000270 Pfam:PF00564
SMART:SM00666 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0018991 GO:GO:0006915 GO:GO:0043066 GO:GO:0002119
GO:GO:0001558 GO:GO:0018996 GO:GO:0040014 GO:GO:0010171
GO:GO:0040011 GO:GO:0009306 GO:GO:0008361 GO:GO:0043621
GO:GO:0043652 GO:GO:0032527 GO:GO:0070971 KO:K09292 GO:GO:0070973
EMBL:AL032652 RefSeq:NP_493462.1 ProteinModelPortal:Q9U1W1
SMR:Q9U1W1 DIP:DIP-26017N IntAct:Q9U1W1 MINT:MINT-1127053
STRING:Q9U1W1 PaxDb:Q9U1W1 EnsemblMetazoa:Y63D3A.5.1
EnsemblMetazoa:Y63D3A.5.2 GeneID:173277 KEGG:cel:CELE_Y63D3A.5
UCSC:Y63D3A.5.1 CTD:173277 WormBase:Y63D3A.5 eggNOG:NOG292374
GeneTree:ENSGT00510000047809 InParanoid:Q9U1W1 OMA:ATIPSFP
NextBio:878971 Uniprot:Q9U1W1
Length = 486
Score = 160 (61.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 65/196 (33%), Positives = 79/196 (40%)
Query: 413 YSQPPASGYNQQGQGYA-----QDSYGG---YHAPQSGYGQAAPYDQQQGYNSAAGYGNV 464
+ PP SG + GYA Q +G APQ G+G A P QG +G
Sbjct: 293 FGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFG-APPQGPPQGGPPQGSFGAP 351
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSA---AMGQQGYGTGQQPSPNTASYPPQGATQP 521
Q+ H PS + G PPPV S+ A Q G P +A PQG P
Sbjct: 352 --PPQQFHAPSPQSFGGP---PPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGP 406
Query: 522 S-YGVPPTSQSGY-GSQVPPQSGYAGYGMPQAQKPLA-NPPAYGQTQQS---PGSAGGYG 575
YG PP G GS PPQ G G+G P P A PP G PG+AG G
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPG 466
Query: 576 QPGYSHSQPPPSSYAQ 591
++ P + Y Q
Sbjct: 467 GNPFARG-PSATGYRQ 481
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 53/178 (29%), Positives = 74/178 (41%)
Query: 439 PQSGYGQAAPYDQQQGYNSA----AGYGNVNNT--SQEGHTPSYGAQGDSTQAPPPVQSS 492
P + P QQQ + + A + ++++T Q+G P G PPP
Sbjct: 248 PVQEFAPPPPQQQQQQFQAPPPPMASHSSISSTPVQQQGFAPPQQFGG-----PPPSGPP 302
Query: 493 AAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQ 552
+ G GY QQ + PPQGA Q +G PP G PPQ + G PQ Q
Sbjct: 303 SEYG--GYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGG---PPQGSF-GAPPPQ-Q 355
Query: 553 KPLANPPAYGQTQQSPGSA-GGYGQPGYSHSQPPPSSYAQPDS--GSQRAP--PSNYG 605
+P ++G SA G + P S PP ++A P S G+ + P P YG
Sbjct: 356 FHAPSPQSFGGPPPPVSSAPGNFAPPPQSG---PPGAFAPPPSAFGAPQGPGGPGGYG 410
Score = 127 (49.8 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 46/134 (34%), Positives = 52/134 (38%)
Query: 482 STQAPPPVQSSAAMG-QQGYGTGQQPSPNTASYPPQGATQ-PSYGVPPTSQSGYGSQVPP 539
S A PPVQ A QQ Q P P AS+ +T G P Q G P
Sbjct: 242 SNAASPPVQEFAPPPPQQQQQQFQAPPPPMASHSSISSTPVQQQGFAPPQQFGGPPPSGP 301
Query: 540 QSGYAGYGMPQAQKP-LANPPAYGQTQQ---SP--GSAGGYGQPGYSHSQPPPSSYAQPD 593
S Y GY PQ Q+ PP G QQ +P G G G P S PPP + P
Sbjct: 302 PSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQG-GPPQGSFGAPPPQQFHAPS 360
Query: 594 SGSQRAPPSNYGAA 607
S PP +A
Sbjct: 361 PQSFGGPPPPVSSA 374
Score = 65 (27.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 27/100 (27%), Positives = 39/100 (39%)
Query: 33 TGFSA-PDPAVAPTSYNSVPPPADEFQDF---QAAKRRAEQIAARLCNSVSAEAKRPRVE 88
T FS+ P P + + ++PPP F AA ++ A + + P
Sbjct: 213 TSFSSQPPPPIE--QFGAIPPPNATIPSFPTSNAASPPVQEFAPPPPQQQQQQFQAPPPP 270
Query: 89 NGSGGFDSA----DKGFSSPPSDLKSIPAPSAIPVSYGGY 124
S S+ +GF+ PP P PS P YGGY
Sbjct: 271 MASHSSISSTPVQQQGFA-PPQQFGG-PPPSGPPSEYGGY 308
Score = 45 (20.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 24 PPSAAARRPTG-FSAPDPAVAPTSYNSVPPP 53
P S AA P F+ P P + + PPP
Sbjct: 240 PTSNAASPPVQEFAPPPPQQQQQQFQAPPPP 270
>UNIPROTKB|E2RA46 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 EMBL:AAEX03014786
EMBL:AAEX03014787 Ensembl:ENSCAFT00000019364 Uniprot:E2RA46
Length = 619
Score = 181 (68.8 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 76/215 (35%), Positives = 93/215 (43%)
Query: 411 YS-YSQPPAS-GYN----QQGQGYAQDSYGGYHAPQSG-YGQAAPYDQQQGYNSAAGYGN 463
YS YSQ A GY+ Q QGYAQ + Y G YGQ Q +A YG
Sbjct: 6 YSTYSQAAAQQGYSAYTAQPTQGYAQTTQQAYGQQSYGTYGQPTDVSYTQAQTTAT-YGQ 64
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY 523
+ G P+ G +T P S QGYGTG + TA+ TQ SY
Sbjct: 65 TAYATSYGQPPA----GYTTPTAPQAYSQPV---QGYGTGAYDT-TTATVT---TTQASY 113
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP- 577
+QS YG+Q P Y YG P A P N PA +T Q S GGY QP
Sbjct: 114 A----AQSAYGTQ--P--AYPAYGQQPAATAPARPQDGNKPA--ETSQPQSSTGGYNQPS 163
Query: 578 -GY---SHSQPP-PSSYA-QPDSGSQRAPPSNYGA 606
GY ++S P P SY QP + PP++Y +
Sbjct: 164 LGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSS 198
Score = 166 (63.5 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 71/218 (32%), Positives = 90/218 (41%)
Query: 410 GYS-YSQPPASGYNQQGQ-GYAQDSYGGYHAPQS-GYGQA---APYDQQQGYNSAAGY-- 461
GYS Y+ P GY Q Q Y Q SYG Y P Y QA A Y Q Y ++ G
Sbjct: 17 GYSAYTAQPTQGYAQTTQQAYGQQSYGTYGQPTDVSYTQAQTTATYGQT-AYATSYGQPP 75
Query: 462 -GNVNNTSQEGHT-P--SYGAQG-DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQ 516
G T+ + ++ P YG D+T A ++ Q YGT QP+ YP
Sbjct: 76 AGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT--QPA-----YPAY 128
Query: 517 GATQPSYGVPPTSQSGY--GSQVPPQSGYAGYGMPQ---AQKPLANPPAYGQTQQSPGSA 571
G QP+ P Q G PQS GY P Q + P G P +A
Sbjct: 129 GQ-QPAATAPARPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTA 187
Query: 572 G-GYGQPGYSHSQPPP---SSYAQPDSGSQRAPPSNYG 605
Y YS +QP SSY+Q ++ Q PS+YG
Sbjct: 188 PPSYPPTSYSSTQPTSYDQSSYSQQNTYGQ---PSSYG 222
Score = 161 (61.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 86/307 (28%), Positives = 109/307 (35%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQY-NMSQPPYGGYPSQPTP 363
GY+Q QA S+GT G P+ Y Q A GQT + QPP GY + P
Sbjct: 28 GYAQTTQQAYGQQSYGTYGQPT--DVSYTQAQTTATYGQTAYATSYGQPP-AGYTTPTAP 84
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQP--PASGY 421
Y + + P P G
Sbjct: 85 QAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPARPQDGN 144
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAA-PYDQQQGYNSAAGYGNVNNTSQEGHTP-SYGAQ 479
Q S GGY+ P GYGQ+ Y Q G Y T+ + P SY
Sbjct: 145 KPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPG-----SYPMQPVTAPPSYPPTSYS-- 197
Query: 480 GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA--TQPSYGV-PPTS---QSGY 533
STQ P S+ Q YG QPS SY Q + Q SYG PPTS Q+G
Sbjct: 198 --STQ-PTSYDQSSYSQQNTYG---QPS----SYGQQSSYGQQSSYGQQPPTSYPPQTGS 247
Query: 534 GSQVPPQSGY--AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQ 591
SQ P Q + YG Q+ +P + G Q +GG+ PG + S P + +
Sbjct: 248 YSQAPSQYSQQSSSYGQ-QSSFRQDHPSSMGVYGQE---SGGFSGPGENRSMSGPDNRGR 303
Query: 592 PDSGSQR 598
G R
Sbjct: 304 GRGGFDR 310
Score = 157 (60.3 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 68/207 (32%), Positives = 82/207 (39%)
Query: 412 SYSQPPAS--------GYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGN 463
SY QPPA Y+Q QGY +Y A + QA+ Y Q Y + Y
Sbjct: 70 SYGQPPAGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTT-QAS-YAAQSAYGTQPAYPA 127
Query: 464 VNNTSQEGHT-PSYGAQGDS-TQAPPPVQSSAAMGQQ--GYGTGQQPSPNT-ASYPPQGA 518
Q T P+ G+ + P S+ Q GYG P SYP Q
Sbjct: 128 YGQ--QPAATAPARPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPV 185
Query: 519 TQP-SYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP 577
T P SY PPTS Y S P + Y Q P +YGQ QS YGQ
Sbjct: 186 TAPPSY--PPTS---YSSTQPTSYDQSSYSQ---QNTYGQPSSYGQ--QS-----SYGQQ 230
Query: 578 GYSHSQPPPSSYAQPDSGSQRAPPSNY 604
S+ Q PP+SY P +GS PS Y
Sbjct: 231 S-SYGQQPPTSYP-PQTGSYSQAPSQY 255
Score = 148 (57.2 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 82/306 (26%), Positives = 99/306 (32%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP-QYNMSQPP--YGGYPSQPTP 363
+QQGY A T+ T G Q YG G Y T Y +Q YG +
Sbjct: 14 AQQGYSAY--TAQPTQGYAQTTQQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSY 71
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQ 423
G P + Y +QP Y Q
Sbjct: 72 GQPPAGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG-TQPAYPAYGQ 130
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAA---PYDQQQGYNSAA-GYGNVNNTSQEGHTPSYGAQ 479
Q A PQ G A P GYN + GYG +N S SY Q
Sbjct: 131 QPAATAPAR------PQDGNKPAETSQPQSSTGGYNQPSLGYGQ-SNYSYPQVPGSYPMQ 183
Query: 480 GDSTQAPP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ- 536
APP P S ++ Y NT P Q SYG QS YG Q
Sbjct: 184 --PVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYG----QQSSYGQQP 237
Query: 537 ---VPPQSGYAGYGMPQAQKPLANPPAYGQT----QQSPGSAGGYGQPGYSHSQPPPS-S 588
PPQ+G Y +Q + +YGQ Q P S G YGQ S P + S
Sbjct: 238 PTSYPPQTG--SYSQAPSQYSQQSS-SYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRS 294
Query: 589 YAQPDS 594
+ PD+
Sbjct: 295 MSGPDN 300
>UNIPROTKB|G3V0E8 [details] [associations]
symbol:PCBP2 "Poly(RC) binding protein 2, isoform CRA_f"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 EMBL:CH471054 GO:GO:0003723 EMBL:AC068889
EMBL:AC023509 RefSeq:NP_001122386.1 UniGene:Hs.546271 GeneID:5094
KEGG:hsa:5094 CTD:5094 HGNC:HGNC:8648 KO:K13162 ChiTaRS:PCBP2
GenomeRNAi:5094 NextBio:19648 ProteinModelPortal:G3V0E8 SMR:G3V0E8
PRIDE:G3V0E8 Ensembl:ENST00000437231 Ensembl:ENST00000455667
ArrayExpress:G3V0E8 Bgee:G3V0E8 Uniprot:G3V0E8
Length = 318
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 52/149 (34%), Positives = 75/149 (50%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
LP STER + I G + I E KQ+
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 121 (47.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 241 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 297
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 298 SLAQYLIN-VRLSSETGGMG 316
Score = 106 (42.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 205 GGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
G +G A L A + + IPN+ +G +IG+ G I ++ +GA+I++ P
Sbjct: 226 GNTGFSAG-LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PV 280
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVIS 293
+ ST+R V I G++ I A+ L+N +S
Sbjct: 281 EGSTDRQVTITGSAASISLAQYLINVRLS 309
Score = 96 (38.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 40/153 (26%), Positives = 74/153 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ K+ E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKKMREESGARI--NIS-EGNCPERIITLAGPTNAIFKAFAMIIDKLEE-DISSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAESGGSGIVAR 212
+ G P+ I + + I V+ E+ G I R
Sbjct: 147 TIAGIPQSIIECVKQICVVMLESPPKGVTIPYR 179
Score = 43 (20.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 103 SPPSD--LKSIPAPSAIPVSYGGYQSMGTSKKIEIP 136
SPP + P PS+ PV + G Q+ + IP
Sbjct: 169 SPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIP 204
>UNIPROTKB|E2RCF9 [details] [associations]
symbol:PCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311 CTD:5094
KO:K13162 OMA:CVVMLEL EMBL:AAEX03014980 RefSeq:XP_857995.1
ProteinModelPortal:E2RCF9 Ensembl:ENSCAFT00000010996 GeneID:477596
KEGG:cfa:477596 Uniprot:E2RCF9
Length = 331
Score = 174 (66.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 52/149 (34%), Positives = 75/149 (50%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
LP STER + I G + I E KQ+
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 121 (47.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 254 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 310
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 311 SLAQYLIN-VRLSSETGGMG 329
Score = 102 (41.0 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 214 LTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQ 273
L A + + IPN+ +G +IG+ G I ++ +GA+I++ P + ST+R V
Sbjct: 247 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT 302
Query: 274 IDGTSEQIESAKQLVNEVIS 293
I G++ I A+ L+N +S
Sbjct: 303 ITGSAASISLAQYLINVRLS 322
Score = 96 (38.9 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 40/153 (26%), Positives = 74/153 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ K+ E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKKMREESGARI--NIS-EGNCPERIITLAGPTNAIFKAFAMIIDKLEE-DISSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAESGGSGIVAR 212
+ G P+ I + + I V+ E+ G I R
Sbjct: 147 TIAGIPQSIIECVKQICVVMLESPPKGVTIPYR 179
Score = 43 (20.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 103 SPPSD--LKSIPAPSAIPVSYGGYQSMGTSKKIEIP 136
SPP + P PS+ PV + G Q+ + IP
Sbjct: 169 SPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIP 204
>RGD|1566093 [details] [associations]
symbol:RGD1566093 "similar to Fusion (involved in t(12;16) in
malignant liposarcoma)" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1566093
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 OrthoDB:EOG4DV5NH IPI:IPI00361397 PRIDE:D3ZSJ6
Ensembl:ENSRNOT00000031767 Uniprot:D3ZSJ6
Length = 460
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 59/173 (34%), Positives = 75/173 (43%)
Query: 429 AQDSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPP 487
A SYG Y P GY Q + +Q G S +GYG +TS G + SYG+ + TQ
Sbjct: 10 ATQSYGAYPTQPGQGYSQQS--NQPYGQQSYSGYGQSADTSGYGQS-SYGSSYEQTQNTG 66
Query: 488 PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYG 547
SA QGYG+ T Y ++Q SYG +S GYG Q P S YG
Sbjct: 67 YGTQSAP---QGYGS-------TGGYGSSQSSQSSYG-QQSSYPGYGQQPAPSSTSGSYG 115
Query: 548 MPQAQKPLANPPAYGQTQQSP--GSAGGYGQPGYSHSQPPPSSYAQPDSGSQR 598
P + G QQS G YGQ S++ PP Y Q + + R
Sbjct: 116 GSSQSSSYGQPQSGGYGQQSGYGGQQQSYGQQQSSYN--PPQGYGQQNQYNSR 166
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 60/152 (39%), Positives = 74/152 (48%)
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGY-GTGQQPSPNTASYPPQGATQPSY 523
N+ +Q+ T SYGA QS+ GQQ Y G GQ S +T+ Y G Q SY
Sbjct: 4 NDYTQQA-TQSYGAYPTQPGQGYSQQSNQPYGQQSYSGYGQ--SADTSGY---G--QSSY 55
Query: 524 G--VPPTSQSGYGSQVPPQSGYA---GYGMPQAQKPL----ANPPAYGQTQQSPGS-AGG 573
G T +GYG+Q PQ GY GYG Q+ + ++ P YGQ Q +P S +G
Sbjct: 56 GSSYEQTQNTGYGTQSAPQ-GYGSTGGYGSSQSSQSSYGQQSSYPGYGQ-QPAPSSTSGS 113
Query: 574 YGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
YG G S S SSY QP SG S YG
Sbjct: 114 YG--GSSQS----SSYGQPQSGGY-GQQSGYG 138
>ZFIN|ZDB-GENE-030131-563 [details] [associations]
symbol:pcbp2 "poly(rC) binding protein 2"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-030131-563 GO:GO:0003723 GeneTree:ENSGT00550000074311
HOGENOM:HOG000182823 HOVERGEN:HBG053520 CTD:5094 KO:K13162
OMA:CVVMLEL HSSP:Q9UNW9 EMBL:CR848672 EMBL:BC045508 EMBL:BC066603
EMBL:AY398394 IPI:IPI00495300 RefSeq:NP_957486.1 UniGene:Dr.76907
SMR:Q7ZVK5 Ensembl:ENSDART00000025885 GeneID:321844 KEGG:dre:321844
InParanoid:Q7ZVK5 NextBio:20807553 Uniprot:Q7ZVK5
Length = 318
Score = 173 (66.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 74/239 (30%), Positives = 110/239 (46%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I + L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTTAIFKAFSMIIEKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S S + T + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDIS--SSMSNSTATSKPPVT-LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTS 318
LP STER + I GT I E KQ+ V+ + +P G + Y+ +P
Sbjct: 137 MLP---NSTERAITIAGTPLSIIECVKQIC--VVM---LESPPK--GVTIP-YRPKPS-- 183
Query: 319 WGTPGAPSMQQPGYGYVQPGAY----PGQTP--QYNMSQPPYGGYPSQPTPGGYPGNWD 371
G+P + G Y G + P T Q M Q P+ P P+ G+ D
Sbjct: 184 ----GSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPF---PLAPSSQGFTAGMD 235
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 34/94 (36%), Positives = 50/94 (53%)
Query: 113 APSAIPVSYGGYQSMGT-SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEAD 171
APS+ + G S T S ++ IPN +G IIG+ G I ++ SGA+I++ E
Sbjct: 224 APSSQGFTAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG- 282
Query: 172 LNSPTRSVELMGTPEQIAKAEQLINDVLAEAESG 205
S R V + G+P I+ AE LIN L+ +G
Sbjct: 283 --SSDRQVTITGSPASISLAEYLINARLSSEATG 314
Score = 100 (40.3 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 215 TGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQI 274
+ Q GS H + IPN+ +G +IG+ G I ++ +GA+I++ P + S++R V I
Sbjct: 237 SAQTGS-H-ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSSDRQVTI 290
Query: 275 DGTSEQIESAKQLVNEVIS 293
G+ I A+ L+N +S
Sbjct: 291 TGSPASISLAEYLINARLS 309
Score = 98 (39.6 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 45/158 (28%), Positives = 73/158 (46%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ K+ E+ AR+ ++S E P R+ +G + K FS L+ +
Sbjct: 34 ESVKKMREESGARI--NIS-EGNCPERIITLAGPTTAIFKAFSMIIEKLEE-------DI 83
Query: 120 SYGGYQSMGTSK-----KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNS 174
S S TSK +I +P + G +IGK G IK ++ +GA++QV D NS
Sbjct: 84 SSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NS 141
Query: 175 PTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVAR 212
R++ + GTP I + + I V+ E+ G I R
Sbjct: 142 TERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYR 179
>UNIPROTKB|Q5ZLP8 [details] [associations]
symbol:IGF2BP3 "Insulin-like growth factor 2 mRNA-binding
protein 3" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding"
evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048027 GO:GO:0003730 HSSP:Q9Y6M1 HOVERGEN:HBG052725
KO:K13197 eggNOG:NOG249985 GeneTree:ENSGT00530000063171
HOGENOM:HOG000000675 OrthoDB:EOG405S0T EMBL:AJ719686
IPI:IPI00594271 RefSeq:NP_001006359.1 UniGene:Gga.4039
ProteinModelPortal:Q5ZLP8 SMR:Q5ZLP8 PRIDE:Q5ZLP8
Ensembl:ENSGALT00000017840 GeneID:420617 KEGG:gga:420617 CTD:10643
InParanoid:Q5ZLP8 OMA:EAQDTKF NextBio:20823504 Uniprot:Q5ZLP8
Length = 584
Score = 181 (68.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 62/208 (29%), Positives = 97/208 (46%)
Query: 89 NGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSG 148
N G F + G P + S A ++ P G Q + + IP + VG IIGK G
Sbjct: 372 NALGLFPPSSSGIPPPAVSVASAAAAASYPPF--GQQPESETVHLFIPALAVGAIIGKQG 429
Query: 149 ETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSG 208
+ IK L +GA I++ D + R V + G PE KA+ I L E G
Sbjct: 430 QHIKQLSRFAGASIKIAPAEGPD--AKLRMVIITGPPEAQFKAQGRIYGKLKEENFFGP- 486
Query: 209 IVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTST 268
+ +A H +K+P+ G VIGKGG+T+ +Q T A + V+P P D +
Sbjct: 487 --KEEVKLEA---H--IKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP-DEND 537
Query: 269 ERTVQIDGTSEQIESAKQLVNEVISENR 296
+ V+I G + A++ + E++++ R
Sbjct: 538 QVVVKITGHFYACQLAQRKIQEILAQVR 565
Score = 140 (54.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 59/224 (26%), Positives = 102/224 (45%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
+P VG IIGK G TI+ + Q+ +KI + R A + + + + TPE + A ++
Sbjct: 203 VPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GAAEKPITIHSTPEGCSTACKI 260
Query: 195 INDVLA-EAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTG 251
I +++ EA+ + T + +KI NN VG +IGK G +K ++ T
Sbjct: 261 IMEIMQKEAQD-------TKFT-----EEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTD 308
Query: 252 ARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPA-------MAG 304
+I + PL + ERT+ + G+ E A++ + + I E+ + A +
Sbjct: 309 TKITISPLQ-DLTLYNPERTITVKGSIETCAKAEEEIMKKIRESYENDIAAMNLQAHLIP 367
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYP--GQTPQ 346
G + PP+S G P P++ +YP GQ P+
Sbjct: 368 GLNLNALGLFPPSSSGIP-PPAVSVASAAAA--ASYPPFGQQPE 408
Score = 43 (20.2 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 15 KRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPA 54
+ YE+ + A G + + P S + +PPPA
Sbjct: 349 RESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPA 388
>UNIPROTKB|Q3SYT9 [details] [associations]
symbol:PCBP2 "Poly(RC) binding protein 2" species:9913 "Bos
taurus" [GO:0050687 "negative regulation of defense response to
virus" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0043161 GO:GO:0003723
GO:GO:0050687 GeneTree:ENSGT00550000074311 eggNOG:NOG315872
HOGENOM:HOG000182823 HOVERGEN:HBG053520 OrthoDB:EOG46WZ8K CTD:5094
KO:K13162 OMA:CVVMLEL EMBL:DAAA02012861 EMBL:DAAA02012860
EMBL:BC103397 IPI:IPI00696193 RefSeq:NP_001029883.1
UniGene:Bt.49118 SMR:Q3SYT9 STRING:Q3SYT9
Ensembl:ENSBTAT00000027662 GeneID:540653 KEGG:bta:540653
InParanoid:Q3SYT9 NextBio:20878753 Uniprot:Q3SYT9
Length = 349
Score = 174 (66.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 52/149 (34%), Positives = 75/149 (50%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
LP STER + I G + I E KQ+
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 121 (47.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 272 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 328
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 329 SLAQYLIN-VRLSSETGGMG 347
Score = 106 (42.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 205 GGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
G +G A L A + + IPN+ +G +IG+ G I ++ +GA+I++ P
Sbjct: 257 GNTGFSAG-LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PV 311
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVIS 293
+ ST+R V I G++ I A+ L+N +S
Sbjct: 312 EGSTDRQVTITGSAASISLAQYLINVRLS 340
Score = 96 (38.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 40/153 (26%), Positives = 74/153 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ K+ E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKKMREESGARI--NIS-EGNCPERIITLAGPTNAIFKAFAMIIDKLEE-DISSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAESGGSGIVAR 212
+ G P+ I + + I V+ E+ G I R
Sbjct: 147 TIAGIPQSIIECVKQICVVMLESPPKGVTIPYR 179
Score = 38 (18.4 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 103 SPPSD--LKSIPAPSAIPVSYGGYQ 125
SPP + P PS+ PV + G Q
Sbjct: 169 SPPKGVTIPYRPKPSSSPVIFAGGQ 193
>MGI|MGI:108202 [details] [associations]
symbol:Pcbp2 "poly(rC) binding protein 2" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0050687 "negative regulation of defense response
to virus" evidence=ISO] [GO:0051607 "defense response to virus"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 MGI:MGI:108202 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0003677 GO:GO:0045087
GO:GO:0051607 GO:GO:0003723 GO:GO:0030529 GO:GO:0050687
GeneTree:ENSGT00550000074311 eggNOG:NOG315872 HOGENOM:HOG000182823
HOVERGEN:HBG053520 OrthoDB:EOG46WZ8K CTD:5094 KO:K13162 OMA:CVVMLEL
ChiTaRS:PCBP2 EMBL:L19661 EMBL:X75947 EMBL:X97982 EMBL:AF236845
EMBL:AF236842 EMBL:AF236843 EMBL:AF236844 IPI:IPI00127707
IPI:IPI00221796 IPI:IPI00221799 PIR:S78515 RefSeq:NP_001096635.1
RefSeq:NP_001096636.1 RefSeq:NP_035172.2 UniGene:Mm.236513
ProteinModelPortal:Q61990 SMR:Q61990 IntAct:Q61990 STRING:Q61990
PhosphoSite:Q61990 REPRODUCTION-2DPAGE:Q61990 PaxDb:Q61990
PRIDE:Q61990 Ensembl:ENSMUST00000077037 Ensembl:ENSMUST00000078404
Ensembl:ENSMUST00000108838 GeneID:18521 KEGG:mmu:18521
UCSC:uc007xvy.2 UCSC:uc007xvz.2 UCSC:uc009vat.1 InParanoid:Q61990
NextBio:294276 Bgee:Q61990 CleanEx:MM_PCBP2 Genevestigator:Q61990
GermOnline:ENSMUSG00000056851 Uniprot:Q61990
Length = 362
Score = 174 (66.3 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 52/149 (34%), Positives = 75/149 (50%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEDISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
LP STER + I G + I E KQ+
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 285 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 341
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 342 SLAQYLIN-VRLSSETGGMG 360
Score = 102 (41.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 214 LTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQ 273
L A + + IPN+ +G +IG+ G I ++ +GA+I++ P + ST+R V
Sbjct: 278 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT 333
Query: 274 IDGTSEQIESAKQLVNEVIS 293
I G++ I A+ L+N +S
Sbjct: 334 ITGSAASISLAQYLINVRLS 353
Score = 96 (38.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 40/153 (26%), Positives = 74/153 (48%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPV 119
++ K+ E+ AR+ ++S E P R+ +G ++ K F+ L+ S++
Sbjct: 34 ESVKKMREESGARI--NIS-EGNCPERIITLAGPTNAIFKAFAMIIDKLEE-DISSSMTN 89
Query: 120 SYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
S + T + + +P + G +IGK G IK ++ +GA++QV D NS R++
Sbjct: 90 STAASRPPVTLRLV-VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAI 146
Query: 180 ELMGTPEQIAKAEQLINDVLAEAESGGSGIVAR 212
+ G P+ I + + I V+ E+ G I R
Sbjct: 147 TIAGIPQSIIECVKQICVVMLESPPKGVTIPYR 179
>UNIPROTKB|C9JGE3 [details] [associations]
symbol:EWSR1 "Ewing sarcoma breakpoint region 1, isoform
CRA_e" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0000166
EMBL:CH471095 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 EMBL:AC002059 EMBL:AL031186 EMBL:AC000026
UniGene:Hs.374477 HGNC:HGNC:3508 HOGENOM:HOG000038010 ChiTaRS:EWSR1
IPI:IPI00953325 SMR:C9JGE3 STRING:C9JGE3 Ensembl:ENST00000332050
UCSC:uc003aez.3 Uniprot:C9JGE3
Length = 583
Score = 178 (67.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 70/210 (33%), Positives = 89/210 (42%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAP-YDQQQ----GYNSAAGYGNVNNTSQEG 471
++ Y+ Q AQ Y Y A P GY Q Y QQ G + Y T+ G
Sbjct: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG 62
Query: 472 HTP---SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
T SYG Q + P + + QGYGTG + TA+ TQ SY
Sbjct: 63 QTAYATSYG-QPPTGYTTPTAPQAYSQPVQGYGTGAYDT-TTATVT---TTQASYA---- 113
Query: 529 SQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP--GY-- 579
+QS YG+Q P Y YG P A P N P +T Q S GGY QP GY
Sbjct: 114 AQSAYGTQ--P--AYPAYGQQPAATAPTRPQDGNKPT--ETSQPQSSTGGYNQPSLGYGQ 167
Query: 580 -SHSQPP-PSSYA-QPDSGSQRAPPSNYGA 606
++S P P SY QP + PP++Y +
Sbjct: 168 SNYSYPQVPGSYPMQPVTAPPSYPPTSYSS 197
Score = 175 (66.7 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 72/217 (33%), Positives = 91/217 (41%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQS-GYGQA---APYDQQQGYNSAAGY--- 461
GYS Y+ P GY Q Q Y Q SYG Y P Y QA A Y Q Y ++ G
Sbjct: 17 GYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQT-AYATSYGQPPT 75
Query: 462 GNVNNTSQEGHT-P--SYGAQG-DSTQAPPPVQSSAAMGQQGYGTGQQPS-PNTASYPPQ 516
G T+ + ++ P YG D+T A ++ Q YGT QP+ P P
Sbjct: 76 GYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT--QPAYPAYGQQPAA 133
Query: 517 GA-TQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQ---AQKPLANPPAYGQTQQSPGSAG 572
A T+P G PT S PQS GY P Q + P G P +A
Sbjct: 134 TAPTRPQDGNKPTETS------QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAP 187
Query: 573 -GYGQPGYSHSQPPP---SSYAQPDSGSQRAPPSNYG 605
Y YS +QP SSY+Q ++ Q PS+YG
Sbjct: 188 PSYPPTSYSSTQPTSYDQSSYSQQNTYGQ---PSSYG 221
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 67/201 (33%), Positives = 82/201 (40%)
Query: 413 YSQPPA-SGYNQQGQGYAQDSYGGYHAP----QSGYGQAAPYDQQQGYNSAAGY---GNV 464
Y+ P A Y+Q QGY +Y A Q+ Y + Y Q Y A G
Sbjct: 77 YTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAY-PAYGQQPAATA 135
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQP-SY 523
Q+G+ P+ +Q S+ Q S GQ Y Q P SYP Q T P SY
Sbjct: 136 PTRPQDGNKPTETSQPQSSTGGYN-QPSLGYGQSNYSYPQVPG----SYPMQPVTAPPSY 190
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
PPTS Y S P + Y Q P +YGQ QS YGQ S+ Q
Sbjct: 191 --PPTS---YSSTQPTSYDQSSYSQ---QNTYGQPSSYGQ--QS-----SYGQQS-SYGQ 234
Query: 584 PPPSSYAQPDSGSQRAPPSNY 604
PP+SY P +GS PS Y
Sbjct: 235 QPPTSYP-PQTGSYSQAPSQY 254
>FB|FBgn0262735 [details] [associations]
symbol:Imp "IGF-II mRNA-binding protein" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IMP] [GO:0051124 "synaptic growth at
neuromuscular junction" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0007283 "spermatogenesis" evidence=IEP]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
SMART:SM00322 GO:GO:0000166 EMBL:AE014298 Gene3D:3.30.70.330
GO:GO:0051124 GO:GO:0007283 GO:GO:0003723 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 CTD:32009 UniGene:Dm.3773 GeneID:32009
KEGG:dme:Dmel_CG1691 FlyBase:FBgn0262735 GenomeRNAi:32009
NextBio:776342 RefSeq:NP_001036268.2 ProteinModelPortal:Q0KHU2
SMR:Q0KHU2 STRING:Q0KHU2 PRIDE:Q0KHU2 UCSC:CG1691-RI
OrthoDB:EOG4RBP0X PhylomeDB:Q0KHU2 Bgee:Q0KHU2 Uniprot:Q0KHU2
Length = 588
Score = 178 (67.7 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 73/278 (26%), Positives = 121/278 (43%)
Query: 90 GSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGE 149
G+G + F S S S S +P + + + + IPN VG IIG G
Sbjct: 281 GNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPN--DLQETTYLYIPNNAVGAIIGTRGS 338
Query: 150 TIKYLQLQSGAKIQVTR-DTEADLNSPT-RSVELMGTPEQIAKAEQLINDVLAEAESGGS 207
I+ + S A +++ D + L+ T R V ++GTPE KA+ +I + + E E
Sbjct: 339 HIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKMRE-EGFMC 397
Query: 208 GIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHL--PPGD 265
G RLT + + + +++VG +IGKGG+ ++ +Q TG+ I+ +P H PP
Sbjct: 398 GTDDVRLTVE-------LLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPPSG 449
Query: 266 TSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAP 325
E V I G ++SA++ + ++ +++ Q + + G +
Sbjct: 450 GDEETPVHIIGLFYSVQSAQRRIRAMMLSTNPPPITKKQKAAKEQLQQQQQSLAGAASSG 509
Query: 326 SMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTP 363
S QQ Q A P PQ + P S TP
Sbjct: 510 SQQQQPQSPSQQQALP---PQ--LHHQPVSSASSSSTP 542
Score = 167 (63.8 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 66/232 (28%), Positives = 106/232 (45%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
+I + + VG IIG+ G TI+ + QS A++ V R + ++ S +S+ + G PE A
Sbjct: 96 RILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR--KENVGSLEKSITIYGNPENCTNA 153
Query: 192 EQLINDVLA-EAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQART 250
+ I +V+ EA S G L+ + + NN +G +IGK G TIK + T
Sbjct: 154 CKRILEVMQQEAISTNKG----ELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDT 209
Query: 251 GARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQG 310
+I V ++ + ER + + G E + A+ N++ ++R Y +
Sbjct: 210 DTKITVSSIN-DINSFNLERIITVKGLIENMSRAE---NQI--STKLRQ-----SY-END 257
Query: 311 YQARPPTSWGTPGA-PS--MQQPGYGYVQPGAYPGQTPQ-YNMSQPPYGGYP 358
QA P S PG P M PG G V + P + Q + MS+ P P
Sbjct: 258 LQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP 309
Score = 57 (25.1 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 26/103 (25%), Positives = 39/103 (37%)
Query: 486 PPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAG 545
PPP+ ++ QQ AS Q QP P+ Q +PPQ +
Sbjct: 481 PPPITKKQKAAKEQLQQQQQSLAGAASSGSQ-QQQPQ---SPSQQQA----LPPQLHHQP 532
Query: 546 YGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSS 588
+ + PPA+ Q QQ+ +A + S PPP +
Sbjct: 533 VSSASSS---STPPAHHQ-QQASTAATSHQLQQQQPSPPPPGN 571
Score = 51 (23.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 548 MPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSG--SQRAPPSNY 604
+ Q Q+ LA + G QQ P S P + PP + QP S S PP+++
Sbjct: 495 LQQQQQSLAGAASSGSQQQQPQS------PSQQQALPPQLHH-QPVSSASSSSTPPAHH 546
Score = 51 (23.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 25/96 (26%), Positives = 37/96 (38%)
Query: 445 QAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQ 504
+AA QQ S AG + + Q+ +PS PV S+++ Q
Sbjct: 489 KAAKEQLQQQQQSLAGAASSGSQQQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQQ 548
Query: 505 QPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQ 540
Q S S+ Q QPS PP + + +Q Q
Sbjct: 549 QASTAATSHQLQ-QQQPS-PPPPGNATAAAAQQQQQ 582
Score = 50 (22.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 24/81 (29%), Positives = 31/81 (38%)
Query: 423 QQGQGYAQDSYGGYHAPQSGYGQAA--PYDQQQGYNSAAGYGNVN-NTSQEGHTP--SYG 477
QQ A S PQS Q A P Q +SA+ + Q+ T S+
Sbjct: 499 QQSLAGAASSGSQQQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQQQASTAATSHQ 558
Query: 478 AQGDSTQAPPPVQSSAAMGQQ 498
Q PPP ++AA QQ
Sbjct: 559 LQQQQPSPPPPGNATAAAAQQ 579
Score = 48 (22.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 21/82 (25%), Positives = 31/82 (37%)
Query: 478 AQGDSTQAPPPVQSSAAMGQQGYGTGQQP--SPNTASYPPQGATQPSYGVPPTSQSGYGS 535
+ G Q P A+ Q + QP S +++S PP Q + + Q
Sbjct: 507 SSGSQQQQPQSPSQQQALPPQLH---HQPVSSASSSSTPPAHHQQQASTAATSHQLQQQQ 563
Query: 536 QVPPQSGYAGYGMPQAQKPLAN 557
PP G A Q Q+ LA+
Sbjct: 564 PSPPPPGNATAAAAQQQQQLAS 585
>UNIPROTKB|J9P8W8 [details] [associations]
symbol:PCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311
EMBL:AAEX03014817 Ensembl:ENSCAFT00000021540 OMA:QTSSHEM
Uniprot:J9P8W8
Length = 315
Score = 172 (65.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 52/149 (34%), Positives = 74/149 (49%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA I ++ N P R + L G I KA +I D L
Sbjct: 25 VGSIIGKKGESVKKMREESGAGINISEG-----NCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TGA++QV
Sbjct: 80 EEVISSS---MTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
LP STER + I G + I E KQ+
Sbjct: 137 MLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 238 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 294
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 295 SLAQYLIN-VRLSSETGGMG 313
Score = 104 (41.7 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 27/89 (30%), Positives = 48/89 (53%)
Query: 205 GGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
G +G + L A + + IPN+ +G +IG+ G I ++ +GA+I++ P
Sbjct: 223 GNTGF-SGSLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PV 277
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVIS 293
+ ST+R V I G++ I A+ L+N +S
Sbjct: 278 EGSTDRQVTITGSAASISLAQYLINVRLS 306
Score = 93 (37.8 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
++ +P + G +IGK G IK ++ +GA++QV D NS R++ + G P+ I +
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIEC 158
Query: 192 EQLINDVLAEAESGGSGIVAR 212
+ I V+ + S G I R
Sbjct: 159 VKQICVVMLDPPSKGVTIPYR 179
>WB|WBGene00004203 [details] [associations]
symbol:swsn-1 species:6239 "Caenorhabditis elegans"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IGI;IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IGI;IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IGI;IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0046662 "regulation of oviposition" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0035262 "gonad
morphogenesis" evidence=IMP] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003677
GO:GO:0040018 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 UniGene:Cel.7072 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 RefSeq:NP_001256907.1
ProteinModelPortal:H8ESF3 SMR:H8ESF3 WormBase:Y113G7B.23c
Uniprot:H8ESF3
Length = 792
Score = 168 (64.2 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 65/182 (35%), Positives = 74/182 (40%)
Query: 416 PPAS--GYNQQGQGYAQDSYGGYHAPQSGYGQAAPYD--QQQGYNSAAGYGNVNNTSQEG 471
PP + GY G G Q +Y + PQ G Q +PY QQQ + A +
Sbjct: 620 PPQAYQGYGGPG-GPPQQAYR--YPPQQGQ-QYSPYPPPQQQQQHQA------QQAQSQA 669
Query: 472 HTPSYGAQGDSTQAPPPVQSSAAMGQQGYG----TGQQPSPNTASYPPQGA-----TQPS 522
H YG G PPP Q GQQ YG GQ P YPPQ QP
Sbjct: 670 H---YGPPGGGQGPPPPPQ-----GQQYYGGPPPPGQPYGP-PGGYPPQQQRPPYQAQPY 720
Query: 523 YGVPPTSQS-GYGSQVPPQSGYAG--YGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
G PP Q GYG PPQ ++G Y P Q P PP +GQ Q G G PG
Sbjct: 721 PGPPPPQQQRGYGYPPPPQPVFSGHPYQQPYGQMP---PPPHGQYQPQQQQGGPMGPPGG 777
Query: 580 SH 581
H
Sbjct: 778 HH 779
Score = 132 (51.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 62/189 (32%), Positives = 67/189 (35%)
Query: 438 APQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT--PSYGAQGDSTQAPPPVQSSAAM 495
AP AP Q Y GYG Q+ + P G Q + PPP Q
Sbjct: 607 APAPVQAPQAPQAPPQAYQ---GYGGPGGPPQQAYRYPPQQGQQ--YSPYPPPQQQQQHQ 661
Query: 496 GQQG-----YGT---GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ--VPPQSGYAG 545
QQ YG GQ P P PPQG Q YG PP YG PPQ
Sbjct: 662 AQQAQSQAHYGPPGGGQGPPP-----PPQG--QQYYGGPPPPGQPYGPPGGYPPQQQRPP 714
Query: 546 YGMPQAQKPLANPP------AYGQTQQ-SPGSAGG-YGQPGYSHSQPPPSSYAQPDS--G 595
Y QAQ P PP YG P +G Y QP Y PPP QP G
Sbjct: 715 Y---QAQ-PYPGPPPPQQQRGYGYPPPPQPVFSGHPYQQP-YGQMPPPPHGQYQPQQQQG 769
Query: 596 SQRAPPSNY 604
PP +
Sbjct: 770 GPMGPPGGH 778
Score = 112 (44.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 46/141 (32%), Positives = 51/141 (36%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAA--G--YGNVN 465
G YS P QQ Q S Y P G G P QQ Y G YG
Sbjct: 645 GQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPG 704
Query: 466 NTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYG- 524
+ P Y AQ PPP Q Q+GYG P P + +P Q QP YG
Sbjct: 705 GYPPQQQRPPYQAQ--PYPGPPPPQQ-----QRGYGYPPPPQPVFSGHPYQ---QP-YGQ 753
Query: 525 VPPTSQSGYGSQVPPQSGYAG 545
+PP Y Q Q G G
Sbjct: 754 MPPPPHGQYQPQ-QQQGGPMG 773
Score = 68 (29.0 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 32/112 (28%), Positives = 42/112 (37%)
Query: 257 IPLHLPPGDTST---ERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQA 313
+P LPPG T + T Q+ S Q + + ++ + R P+ QA
Sbjct: 548 LPAGLPPGFEVTGPPQPTPQVQ-ISAQEAAIPEKMDTSEAATAARPPSTPQAPQAPPVQA 606
Query: 314 RP-PTSWGTPGAPSMQQPGY-GYVQPGAYPGQTPQYNMSQPPYGGYPSQPTP 363
P P P AP Y GY PG P Q +Y PP G P P
Sbjct: 607 APAPVQ--APQAPQAPPQAYQGYGGPGGPPQQAYRY----PPQQGQQYSPYP 652
Score = 64 (27.6 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 25/62 (40%), Positives = 28/62 (45%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP-YGGYPSQPTPGG 365
S+ ARPP+ TP AP Q P VQ P Q PQ + P Y GY PGG
Sbjct: 584 SEAATAARPPS---TPQAP--QAPP---VQAAPAPVQAPQAPQAPPQAYQGYGG---PGG 632
Query: 366 YP 367
P
Sbjct: 633 PP 634
Score = 54 (24.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 29/112 (25%), Positives = 45/112 (40%)
Query: 17 KYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLCN 76
KY + A +R + S PA P + PP Q +A+ A I ++
Sbjct: 528 KYLENRAKHEAHSRMTS--SGALPAGLPPGFEVTGPPQPTPQVQISAQEAA--IPEKMDT 583
Query: 77 SVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMG 128
S +A A RP + A + P+ +++ AP A P +Y GY G
Sbjct: 584 SEAATAARPP---STPQAPQAPP-VQAAPAPVQAPQAPQAPPQAYQGYGGPG 631
Score = 38 (18.4 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 14/53 (26%), Positives = 21/53 (39%)
Query: 6 QYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQ 58
Q SD P+ T+ A PTG +P ++ S PP +E +
Sbjct: 172 QVDSDARPAPVA-PPPTSHFMVLADTPTGIQPMNPPGKESAGASGEPPKEEIK 223
>UNIPROTKB|B0QYK0 [details] [associations]
symbol:EWSR1 "RNA-binding protein EWS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199
SMART:SM00360 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 EMBL:AC002059
EMBL:AL031186 EMBL:AC000026 UniGene:Hs.374477 HGNC:HGNC:3508
HOGENOM:HOG000038010 HOVERGEN:HBG000970 ChiTaRS:EWSR1
IPI:IPI00879242 SMR:B0QYK0 STRING:B0QYK0 Ensembl:ENST00000331029
Uniprot:B0QYK0
Length = 618
Score = 178 (67.7 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 70/210 (33%), Positives = 89/210 (42%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAP-YDQQQ----GYNSAAGYGNVNNTSQEG 471
++ Y+ Q AQ Y Y A P GY Q Y QQ G + Y T+ G
Sbjct: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG 62
Query: 472 HTP---SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
T SYG Q + P + + QGYGTG + TA+ TQ SY
Sbjct: 63 QTAYATSYG-QPPTGYTTPTAPQAYSQPVQGYGTGAYDT-TTATVT---TTQASYA---- 113
Query: 529 SQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP--GY-- 579
+QS YG+Q P Y YG P A P N P +T Q S GGY QP GY
Sbjct: 114 AQSAYGTQ--P--AYPAYGQQPAATAPTRPQDGNKPT--ETSQPQSSTGGYNQPSLGYGQ 167
Query: 580 -SHSQPP-PSSYA-QPDSGSQRAPPSNYGA 606
++S P P SY QP + PP++Y +
Sbjct: 168 SNYSYPQVPGSYPMQPVTAPPSYPPTSYSS 197
Score = 175 (66.7 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 72/217 (33%), Positives = 91/217 (41%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQS-GYGQA---APYDQQQGYNSAAGY--- 461
GYS Y+ P GY Q Q Y Q SYG Y P Y QA A Y Q Y ++ G
Sbjct: 17 GYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQT-AYATSYGQPPT 75
Query: 462 GNVNNTSQEGHT-P--SYGAQG-DSTQAPPPVQSSAAMGQQGYGTGQQPS-PNTASYPPQ 516
G T+ + ++ P YG D+T A ++ Q YGT QP+ P P
Sbjct: 76 GYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT--QPAYPAYGQQPAA 133
Query: 517 GA-TQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQ---AQKPLANPPAYGQTQQSPGSAG 572
A T+P G PT S PQS GY P Q + P G P +A
Sbjct: 134 TAPTRPQDGNKPTETS------QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAP 187
Query: 573 -GYGQPGYSHSQPPP---SSYAQPDSGSQRAPPSNYG 605
Y YS +QP SSY+Q ++ Q PS+YG
Sbjct: 188 PSYPPTSYSSTQPTSYDQSSYSQQNTYGQ---PSSYG 221
Score = 161 (61.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 69/213 (32%), Positives = 83/213 (38%)
Query: 412 SYSQPP-ASGYNQQGQGYAQDSYG-GYHAPQSGYGQAAPYDQ--------QQGYNSAAGY 461
+Y Q A+ Y Q GY + Y P GYG A YD Q Y + + Y
Sbjct: 60 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGA-YDTTTATVTTTQASYAAQSAY 118
Query: 462 GNVNNTSQEGHTPSYGA-----QGDS-TQAPPPVQSSAAMGQQ--GYGTGQQPSPNT-AS 512
G G P+ A G+ T+ P S+ Q GYG P S
Sbjct: 119 GTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGS 178
Query: 513 YPPQGATQP-SYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA 571
YP Q T P SY PPTS Y S P + Y Q P +YGQ QS
Sbjct: 179 YPMQPVTAPPSY--PPTS---YSSTQPTSYDQSSYSQ---QNTYGQPSSYGQ--QS---- 224
Query: 572 GGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNY 604
YGQ S+ Q PP+SY P +GS PS Y
Sbjct: 225 -SYGQQS-SYGQQPPTSYP-PQTGSYSQAPSQY 254
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 86/307 (28%), Positives = 109/307 (35%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQY-NMSQPPYGGYPSQPTP 363
GY+Q QA S+GT G P+ Y Q A GQT + QPP G Y + P
Sbjct: 28 GYAQTT-QAYGQQSYGTYGQPT--DVSYTQAQTTATYGQTAYATSYGQPPTG-YTTPTAP 83
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQP--PASGY 421
Y + + P P G
Sbjct: 84 QAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGN 143
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAA-PYDQQQGYNSAAGYGNVNNTSQEGHTP-SYGAQ 479
Q S GGY+ P GYGQ+ Y Q G Y T+ + P SY
Sbjct: 144 KPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPG-----SYPMQPVTAPPSYPPTSYS-- 196
Query: 480 GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA--TQPSYGV-PPTS---QSGY 533
STQ P S+ Q YG QPS SY Q + Q SYG PPTS Q+G
Sbjct: 197 --STQ-PTSYDQSSYSQQNTYG---QPS----SYGQQSSYGQQSSYGQQPPTSYPPQTGS 246
Query: 534 GSQVPPQSGY--AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQ 591
SQ P Q + YG Q+ +P + G Q +GG+ PG + S P + +
Sbjct: 247 YSQAPSQYSQQSSSYGQ-QSSFRQDHPSSMGVYGQE---SGGFSGPGENRSMSGPDNRGR 302
Query: 592 PDSGSQR 598
G R
Sbjct: 303 GRGGFDR 309
Score = 138 (53.6 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 79/303 (26%), Positives = 98/303 (32%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP-QYNMSQPP--YGGYPSQPTP 363
+QQGY A T+ T G Q YG G Y T Y +Q YG +
Sbjct: 14 AQQGYSAY--TAQPTQGYAQTTQ-AYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSY 70
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQ 423
G P + Y +QP Y Q
Sbjct: 71 GQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG-TQPAYPAYGQ 129
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAA-GYGNVNNTSQEGHTPSYGAQGDS 482
Q A + P + P GYN + GYG +N S SY Q
Sbjct: 130 QPAATAPTRPQDGNKPTE---TSQPQSSTGGYNQPSLGYGQ-SNYSYPQVPGSYPMQ--P 183
Query: 483 TQAPP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ---- 536
APP P S ++ Y NT P Q SYG QS YG Q
Sbjct: 184 VTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYG----QQSSYGQQPPTS 239
Query: 537 VPPQSGYAGYGMPQAQKPLANPPAYGQT----QQSPGSAGGYGQPGYSHSQPPPS-SYAQ 591
PPQ+G Y +Q + +YGQ Q P S G YGQ S P + S +
Sbjct: 240 YPPQTG--SYSQAPSQYSQQSS-SYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSG 296
Query: 592 PDS 594
PD+
Sbjct: 297 PDN 299
>MGI|MGI:1932491 [details] [associations]
symbol:Prp2 "proline rich protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:1932491 GO:GO:0005576 InterPro:IPR026086 PANTHER:PTHR23203
UniGene:Mm.425348 UniGene:Mm.484054 CleanEx:MM_PRH1 EMBL:M23236
EMBL:M12100 EMBL:M19419 IPI:IPI00474263 IPI:IPI00855123 PIR:A28996
PIR:D29149 UniGene:Mm.333439 Genevestigator:P05143
GermOnline:ENSMUSG00000058295 Uniprot:P05143
Length = 317
Score = 142 (55.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 47/139 (33%), Positives = 52/139 (37%)
Query: 466 NTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGT--GQQPSPNTASYPPQGAT-QPS 522
N SQ+G P G Q Q PPP QG G QP P PP G +P
Sbjct: 46 NGSQQGPPPPGGPQPRPPQGPPPPGGPQPRPPQGPPPPGGPQPRPPQGPPPPGGPQPRPP 105
Query: 523 YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHS 582
G PP G Q P G G PQ + P PP G Q+ P G P
Sbjct: 106 QGPPPPG----GPQPRPPQGPPPPGGPQPRPPQGPPPPGGPQQRPP-----QGPPPPGGP 156
Query: 583 QPPPSSYAQPDSGSQRAPP 601
QP P P +G Q PP
Sbjct: 157 QPRPPQGPPPPAGPQPRPP 175
Score = 137 (53.3 bits), Expect = 4.1e-10, Sum P(3) = 4.1e-10
Identities = 45/135 (33%), Positives = 54/135 (40%)
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGT--GQQPSPNTASYPPQGA-TQPSYGVP 526
+G P G TQ PPP Q G QP P PP G +P+ G P
Sbjct: 176 QGPPPPAGPHLRPTQGPPPTGGPQQRYPQSPPPPGGPQPRPPQGPPPPGGPHPRPTQGPP 235
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPP 586
PT +Q PP +G G PQ Q+P PP G Q P G P + QP P
Sbjct: 236 PTGPQPRPTQGPPPTG----G-PQ-QRPPQGPPPPGGPQPRPPQ----GPPPPTGPQPRP 285
Query: 587 SSYAQPDSGSQRAPP 601
+ P G Q+ PP
Sbjct: 286 TQGPHPTGGPQQTPP 300
Score = 124 (48.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 42/136 (30%), Positives = 53/136 (38%)
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGT--GQQPSPNTASYPPQGAT-QPSYGVP 526
+G P G Q Q PPP QG G QP P PP G +P G P
Sbjct: 120 QGPPPPGGPQPRPPQGPPPPGGPQQRPPQGPPPPGGPQPRPPQGPPPPAGPQPRPPQGPP 179
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPP 586
P + G + P G G PQ + P + PP G + P G P +Q PP
Sbjct: 180 PPA----GPHLRPTQGPPPTGGPQQRYPQSPPPPGGPQPRPPQGPPPPGGPHPRPTQGPP 235
Query: 587 SSYAQPDSGSQRAPPS 602
+ QP +Q PP+
Sbjct: 236 PTGPQPRP-TQGPPPT 250
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 41/129 (31%), Positives = 47/129 (36%)
Query: 474 PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGAT-QPSYGVPPTSQSG 532
P+ +Q PPV S G G G QP P PP G +P G PP
Sbjct: 30 PNQRPPPSGSQPRPPVNGSQ-QGPPPPG-GPQPRPPQGPPPPGGPQPRPPQGPPPPG--- 84
Query: 533 YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQP 592
G Q P G G PQ + P PP G + P G P QP P P
Sbjct: 85 -GPQPRPPQGPPPPGGPQPRPPQGPPPPGGPQPRPP-----QGPPPPGGPQPRPPQGPPP 138
Query: 593 DSGSQRAPP 601
G Q+ PP
Sbjct: 139 PGGPQQRPP 147
Score = 112 (44.5 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 46/152 (30%), Positives = 52/152 (34%)
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYG--TGQQPSPNTASYPPQGA-TQPSYGVP 526
+G P G Q Q PPP QG G QP P PP G +P+ G P
Sbjct: 134 QGPPPPGGPQQRPPQGPPPPGGPQPRPPQGPPPPAGPQPRPPQGPPPPAGPHLRPTQGPP 193
Query: 527 PTS--QSGYGSQVPPQSG---YAGYGMPQA----QKPLANPPAYG---QTQQSPGSAGG- 573
PT Q Y PP G G P +P PP G + Q P GG
Sbjct: 194 PTGGPQQRYPQSPPPPGGPQPRPPQGPPPPGGPHPRPTQGPPPTGPQPRPTQGPPPTGGP 253
Query: 574 -----YGQPGYSHSQPPPSSYAQPDSGSQRAP 600
G P QP P P +G Q P
Sbjct: 254 QQRPPQGPPPPGGPQPRPPQGPPPPTGPQPRP 285
Score = 107 (42.7 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 58/188 (30%), Positives = 68/188 (36%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHA--PQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTSQEGH 472
PP G QQ GG PQ A P + QG AG ++ T +G
Sbjct: 136 PPPPGGPQQRPPQGPPPPGGPQPRPPQGPPPPAGPQPRPPQGPPPPAG-PHLRPT--QGP 192
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPN-TASYPPQGAT-QPSYGVPPTSQ 530
P+ G Q Q+PPP QG P P T PP G +P+ G PPT
Sbjct: 193 PPTGGPQQRYPQSPPPPGGPQPRPPQGPPPPGGPHPRPTQGPPPTGPQPRPTQGPPPT-- 250
Query: 531 SGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQT-------------QQSPGSAGGYGQP 577
G Q PPQ G G PQ + P PP G QQ+P AG P
Sbjct: 251 -GGPQQRPPQ-GPPPPGGPQPRPPQGPPPPTGPQPRPTQGPHPTGGPQQTPPLAGNPQGP 308
Query: 578 GYSHSQPP 585
Q P
Sbjct: 309 PQGRPQGP 316
Score = 77 (32.2 bits), Expect = 4.1e-10, Sum P(3) = 4.1e-10
Identities = 23/58 (39%), Positives = 25/58 (43%)
Query: 310 GYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYP 367
G Q RPP PG P + P G PG G P+ PP GG P Q P G P
Sbjct: 99 GPQPRPPQGPPPPGGPQPRPP-QGPPPPG---GPQPRPPQGPPPPGG-PQQRPPQGPP 151
Score = 76 (31.8 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 32/100 (32%), Positives = 43/100 (43%)
Query: 276 GTSEQIESAKQLVNE--VISENRIRNP---AMAGGYSQQGYQARPPTSWGTPGAPSMQQP 330
G E++++ Q+ N+ S ++ R P + G G Q RPP PG P + P
Sbjct: 18 GPREELQNQIQIPNQRPPPSGSQPRPPVNGSQQGPPPPGGPQPRPPQGPPPPGGPQPRPP 77
Query: 331 GYGYVQPGAYPGQTPQYNMSQPPYGG---YPSQ--PTPGG 365
G PG G P+ PP GG P Q P PGG
Sbjct: 78 -QGPPPPG---GPQPRPPQGPPPPGGPQPRPPQGPPPPGG 113
Score = 72 (30.4 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 24/61 (39%), Positives = 26/61 (42%)
Query: 310 GYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGG---YPSQ--PTPG 364
G Q RPP PG P + P G PG G P+ PP GG P Q P PG
Sbjct: 85 GPQPRPPQGPPPPGGPQPRPP-QGPPPPG---GPQPRPPQGPPPPGGPQPRPPQGPPPPG 140
Query: 365 G 365
G
Sbjct: 141 G 141
Score = 72 (30.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 24/61 (39%), Positives = 26/61 (42%)
Query: 310 GYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGG---YPSQ--PTPG 364
G Q RPP PG P + P G PG G P+ PP GG P Q P PG
Sbjct: 71 GPQPRPPQGPPPPGGPQPRPP-QGPPPPG---GPQPRPPQGPPPPGGPQPRPPQGPPPPG 126
Query: 365 G 365
G
Sbjct: 127 G 127
Score = 71 (30.1 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 22/58 (37%), Positives = 25/58 (43%)
Query: 310 GYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYP 367
G Q RPP PG P Q+P G PG G P+ PP G +P P G P
Sbjct: 127 GPQPRPPQGPPPPGGPQ-QRPPQGPPPPG---GPQPRPPQGPPPPAGPQPRP-PQGPP 179
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/45 (33%), Positives = 17/45 (37%)
Query: 11 GTPSKRKYEDQTTPPSAAARRPTGFSAPDPA-VAPTSYNSVPPPA 54
G P +R + P R P G P PA P PPPA
Sbjct: 140 GGPQQRPPQGPPPPGGPQPRPPQG--PPPPAGPQPRPPQGPPPPA 182
Score = 45 (20.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 341 PGQTPQYNMSQP--PYGGYPSQPTPGGYP 367
P Q P + SQP P G P P G P
Sbjct: 30 PNQRPPPSGSQPRPPVNGSQQGPPPPGGP 58
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 13/44 (29%), Positives = 15/44 (34%)
Query: 11 GTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPA 54
G P R + PP +RP P P PPPA
Sbjct: 126 GGPQPRPPQGPP-PPGGPQQRPPQGPPPPGGPQPRPPQGPPPPA 168
Score = 41 (19.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 8/21 (38%), Positives = 8/21 (38%)
Query: 348 NMSQPPYGGYPSQPTPGGYPG 368
N PP G P P G G
Sbjct: 31 NQRPPPSGSQPRPPVNGSQQG 51
Score = 39 (18.8 bits), Expect = 4.1e-10, Sum P(3) = 4.1e-10
Identities = 12/49 (24%), Positives = 13/49 (26%)
Query: 5 PQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
P S P + PP RP P P PPP
Sbjct: 35 PPSGSQPRPPVNGSQQGPPPPGGPQPRPPQGPPPPGGPQPRPPQGPPPP 83
Score = 37 (18.1 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 12/43 (27%), Positives = 13/43 (30%)
Query: 11 GTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
G P R + P R P G P P PPP
Sbjct: 56 GGPQPRPPQGPPPPGGPQPRPPQG-PPPPGGPQPRPPQGPPPP 97
Score = 37 (18.1 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 12/43 (27%), Positives = 13/43 (30%)
Query: 11 GTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
G P R + P R P G P P PPP
Sbjct: 84 GGPQPRPPQGPPPPGGPQPRPPQG-PPPPGGPQPRPPQGPPPP 125
Score = 37 (18.1 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 12/43 (27%), Positives = 13/43 (30%)
Query: 11 GTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
G P R + P R P G P P PPP
Sbjct: 70 GGPQPRPPQGPPPPGGPQPRPPQG-PPPPGGPQPRPPQGPPPP 111
Score = 37 (18.1 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 12/43 (27%), Positives = 13/43 (30%)
Query: 11 GTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
G P R + P R P G P P PPP
Sbjct: 98 GGPQPRPPQGPPPPGGPQPRPPQG-PPPPGGPQPRPPQGPPPP 139
>UNIPROTKB|E9PFP8 [details] [associations]
symbol:PCBP3 "Poly(rC)-binding protein 3" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005739 GO:GO:0005634 GO:GO:0003723
EMBL:AJ011931 EMBL:AJ239328 EMBL:AL133492 EMBL:AL133493
EMBL:AL592528 HGNC:HGNC:8651 ChiTaRS:PCBP3 IPI:IPI00550365
ProteinModelPortal:E9PFP8 SMR:E9PFP8 PRIDE:E9PFP8
Ensembl:ENST00000400304 UCSC:uc002zht.2 ArrayExpress:E9PFP8
Bgee:E9PFP8 Uniprot:E9PFP8
Length = 361
Score = 172 (65.6 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 59/173 (34%), Positives = 85/173 (49%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ N P R
Sbjct: 5 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEG-----NCPERI 58
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDH---FAMKIPNNKVGLV 235
V + G + I KA +I E I+ A S + +P ++ G +
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEE------DIINSMSNSPATSKPPVTLRLVVPASQCGSL 112
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
IGKGG IK ++ TGA++QV LP STER V I GT + I + KQ+
Sbjct: 113 IGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 162
Score = 116 (45.9 bits), Expect = 0.00097, P = 0.00097
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
++ ++ IPN +G IIG+ G I ++ SGA+I++ TE S R + + GTP I
Sbjct: 284 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG---SSERQITITGTPANI 340
Query: 189 AKAEQLINDVLAEAESG 205
+ A+ LIN L +G
Sbjct: 341 SLAQYLINARLTSEVTG 357
Score = 108 (43.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 42/155 (27%), Positives = 74/155 (47%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKS--IPAPSAI 117
+ K+ E+ AR+ ++S E P R+ +G D+ K F+ + I + S
Sbjct: 34 ETVKKMREESGARI--NIS-EGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNS 90
Query: 118 PVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTR 177
P + + ++ +P + G +IGK G IK ++ +GA++QV D NS R
Sbjct: 91 PAT----SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTER 144
Query: 178 SVELMGTPEQIAKAEQLINDVLAEAESGGSGIVAR 212
+V + GTP+ I + + I V+ E+ G+ I R
Sbjct: 145 AVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Score = 95 (38.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 220 SDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSE 279
S H + IPN+ +G +IG+ G I ++ +GA+I++ + G S+ER + I GT
Sbjct: 284 STH-ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA--NATEG--SSERQITITGTPA 338
Query: 280 QIESAKQLVN 289
I A+ L+N
Sbjct: 339 NISLAQYLIN 348
Score = 43 (20.2 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 27/104 (25%), Positives = 39/104 (37%)
Query: 458 AAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQG 517
AA N++ Q P+Y QG P + + Q Q P +PP G
Sbjct: 200 AASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQ-----QTP------FPPLG 248
Query: 518 ATQPSYGVPPTSQSGYGSQVPPQSGYAGYG-MPQAQKPLANPPA 560
T P++ P G ++P S M Q+ A+PPA
Sbjct: 249 QTNPAF--P-------GEKLPLHSSEEAQNLMGQSSGLDASPPA 283
>UNIPROTKB|Q01844 [details] [associations]
symbol:EWSR1 "RNA-binding protein EWS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50096 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0046872 EMBL:CH471095 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 EMBL:AC002059 MIM:612160 Orphanet:97338
Pathway_Interaction_DB:bard1pathway eggNOG:NOG240581 EMBL:AL031186
MIM:612219 Orphanet:319 EMBL:X66899 EMBL:X72990 EMBL:X72991
EMBL:X72992 EMBL:X72993 EMBL:X72994 EMBL:X72995 EMBL:X72996
EMBL:X72997 EMBL:X72998 EMBL:X72999 EMBL:X73000 EMBL:X73001
EMBL:X73002 EMBL:X73003 EMBL:X73004 EMBL:Y07848 EMBL:CR456490
EMBL:AK056309 EMBL:AK056681 EMBL:AC000026 EMBL:BC000527
EMBL:BC004817 EMBL:BC011048 EMBL:BC072442 EMBL:Y08806 EMBL:AB016435
IPI:IPI00065554 IPI:IPI00293254 IPI:IPI00335961 IPI:IPI00872855
IPI:IPI00879259 PIR:A49358 RefSeq:NP_001156757.1
RefSeq:NP_001156759.1 RefSeq:NP_005234.1 RefSeq:NP_053733.2
UniGene:Hs.374477 PDB:2CPE PDBsum:2CPE ProteinModelPortal:Q01844
SMR:Q01844 IntAct:Q01844 MINT:MINT-2858561 STRING:Q01844
PhosphoSite:Q01844 DMDM:544261 PaxDb:Q01844 PRIDE:Q01844 DNASU:2130
Ensembl:ENST00000332035 Ensembl:ENST00000333395
Ensembl:ENST00000397938 Ensembl:ENST00000406548
Ensembl:ENST00000414183 GeneID:2130 KEGG:hsa:2130 UCSC:uc003aet.3
CTD:2130 GeneCards:GC22P029663 HGNC:HGNC:3508 HPA:CAB004230
MIM:133450 neXtProt:NX_Q01844 Orphanet:83469 PharmGKB:PA27921
HOGENOM:HOG000038010 HOVERGEN:HBG000970 KO:K13209 OMA:EGTSTGY
OrthoDB:EOG42NJ15 PhylomeDB:Q01844 ChiTaRS:EWSR1
EvolutionaryTrace:Q01844 GenomeRNAi:2130 NextBio:8605
ArrayExpress:Q01844 Bgee:Q01844 CleanEx:HS_EWSR1
Genevestigator:Q01844 GermOnline:ENSG00000182944 Uniprot:Q01844
Length = 656
Score = 178 (67.7 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 70/210 (33%), Positives = 89/210 (42%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAP-YDQQQ----GYNSAAGYGNVNNTSQEG 471
++ Y+ Q AQ Y Y A P GY Q Y QQ G + Y T+ G
Sbjct: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG 62
Query: 472 HTP---SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
T SYG Q + P + + QGYGTG + TA+ TQ SY
Sbjct: 63 QTAYATSYG-QPPTGYTTPTAPQAYSQPVQGYGTGAYDT-TTATVT---TTQASYA---- 113
Query: 529 SQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP--GY-- 579
+QS YG+Q P Y YG P A P N P +T Q S GGY QP GY
Sbjct: 114 AQSAYGTQ--P--AYPAYGQQPAATAPTRPQDGNKPT--ETSQPQSSTGGYNQPSLGYGQ 167
Query: 580 -SHSQPP-PSSYA-QPDSGSQRAPPSNYGA 606
++S P P SY QP + PP++Y +
Sbjct: 168 SNYSYPQVPGSYPMQPVTAPPSYPPTSYSS 197
Score = 175 (66.7 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 72/217 (33%), Positives = 91/217 (41%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQS-GYGQA---APYDQQQGYNSAAGY--- 461
GYS Y+ P GY Q Q Y Q SYG Y P Y QA A Y Q Y ++ G
Sbjct: 17 GYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQT-AYATSYGQPPT 75
Query: 462 GNVNNTSQEGHT-P--SYGAQG-DSTQAPPPVQSSAAMGQQGYGTGQQPS-PNTASYPPQ 516
G T+ + ++ P YG D+T A ++ Q YGT QP+ P P
Sbjct: 76 GYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT--QPAYPAYGQQPAA 133
Query: 517 GA-TQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQ---AQKPLANPPAYGQTQQSPGSAG 572
A T+P G PT S PQS GY P Q + P G P +A
Sbjct: 134 TAPTRPQDGNKPTETS------QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAP 187
Query: 573 -GYGQPGYSHSQPPP---SSYAQPDSGSQRAPPSNYG 605
Y YS +QP SSY+Q ++ Q PS+YG
Sbjct: 188 PSYPPTSYSSTQPTSYDQSSYSQQNTYGQ---PSSYG 221
Score = 161 (61.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 69/213 (32%), Positives = 83/213 (38%)
Query: 412 SYSQPP-ASGYNQQGQGYAQDSYG-GYHAPQSGYGQAAPYDQ--------QQGYNSAAGY 461
+Y Q A+ Y Q GY + Y P GYG A YD Q Y + + Y
Sbjct: 60 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGA-YDTTTATVTTTQASYAAQSAY 118
Query: 462 GNVNNTSQEGHTPSYGA-----QGDS-TQAPPPVQSSAAMGQQ--GYGTGQQPSPNT-AS 512
G G P+ A G+ T+ P S+ Q GYG P S
Sbjct: 119 GTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGS 178
Query: 513 YPPQGATQP-SYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA 571
YP Q T P SY PPTS Y S P + Y Q P +YGQ QS
Sbjct: 179 YPMQPVTAPPSY--PPTS---YSSTQPTSYDQSSYSQ---QNTYGQPSSYGQ--QS---- 224
Query: 572 GGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNY 604
YGQ S+ Q PP+SY P +GS PS Y
Sbjct: 225 -SYGQQS-SYGQQPPTSYP-PQTGSYSQAPSQY 254
Score = 138 (53.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 79/303 (26%), Positives = 98/303 (32%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP-QYNMSQPP--YGGYPSQPTP 363
+QQGY A T+ T G Q YG G Y T Y +Q YG +
Sbjct: 14 AQQGYSAY--TAQPTQGYAQTTQ-AYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSY 70
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQ 423
G P + Y +QP Y Q
Sbjct: 71 GQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG-TQPAYPAYGQ 129
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAA-GYGNVNNTSQEGHTPSYGAQGDS 482
Q A + P + P GYN + GYG +N S SY Q
Sbjct: 130 QPAATAPTRPQDGNKPTE---TSQPQSSTGGYNQPSLGYGQ-SNYSYPQVPGSYPMQ--P 183
Query: 483 TQAPP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ---- 536
APP P S ++ Y NT P Q SYG QS YG Q
Sbjct: 184 VTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYG----QQSSYGQQPPTS 239
Query: 537 VPPQSGYAGYGMPQAQKPLANPPAYGQT----QQSPGSAGGYGQPGYSHSQPPPS-SYAQ 591
PPQ+G Y +Q + +YGQ Q P S G YGQ S P + S +
Sbjct: 240 YPPQTG--SYSQAPSQYSQQSS-SYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSG 296
Query: 592 PDS 594
PD+
Sbjct: 297 PDN 299
Score = 122 (48.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 51/180 (28%), Positives = 70/180 (38%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
S PP S + Q Y Q SY + Q+ YGQ + Y QQ Y + YG TS T
Sbjct: 189 SYPPTSYSSTQPTSYDQSSY----SQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQT 244
Query: 474 PSYGAQGDSTQAPPPV-QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG 532
SY +QAP Q S++ GQQ PS + Y + G S SG
Sbjct: 245 GSY------SQAPSQYSQQSSSYGQQSSFRQDHPS-SMGVYGQESGGFSGPG-ENRSMSG 296
Query: 533 YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQP 592
++ + G+ GM + + G S G GG+ +PG + P P
Sbjct: 297 PDNRGRGRGGFDRGGMSRGGRG-GGRGGMG----SAGERGGFNKPGGPMDEGPDLDLGPP 351
Score = 82 (33.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 23/66 (34%), Positives = 28/66 (42%)
Query: 306 YSQQGYQA---RPPTSWGTPGAP-SMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP 361
Y Q Y +PPT + TP AP + QP GY GAY T +Q Y +
Sbjct: 61 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGY-GTGAYDTTTATVTTTQASYAAQSAYG 119
Query: 362 TPGGYP 367
T YP
Sbjct: 120 TQPAYP 125
Score = 50 (22.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 4 EPQYSSDG--TPSKRKYEDQTTPPSAAARRPTG-FSAPDPAVAPTSYNSVPP 52
+PQ S+ G PS + + P P +AP P+ PTSY+S P
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAP-PSYPPTSYSSTQP 200
>UNIPROTKB|E2RA07 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 OMA:EGTSTGY
EMBL:AAEX03014786 EMBL:AAEX03014787 Ensembl:ENSCAFT00000019384
Uniprot:E2RA07
Length = 671
Score = 178 (67.7 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 75/217 (34%), Positives = 94/217 (43%)
Query: 411 YS-YSQPPAS-GYN----QQGQGYAQDSYGGYHAPQSG-YGQAAPYDQQQGYNSAAGYGN 463
YS YSQ A GY+ Q QGYAQ + Y G YGQ Q +A YG
Sbjct: 6 YSTYSQAAAQQGYSAYTAQPTQGYAQTTQQAYGQQSYGTYGQPTDVSYTQAQTTAT-YGQ 64
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY 523
+ G P+ G +T P S QGYGTG + TA+ TQ SY
Sbjct: 65 TAYATSYGQPPA----GYTTPTAPQAYSQPV---QGYGTGAYDT-TTATVT---TTQASY 113
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP- 577
+QS YG+Q P Y YG P A P N PA +T Q S GGY QP
Sbjct: 114 A----AQSAYGTQ--P--AYPAYGQQPAATAPARPQDGNKPA--ETSQPQSSTGGYNQPS 163
Query: 578 -GY---SHSQPP-PSSYA-QPDSGSQRAPPSNYGAAT 608
GY ++S P P SY QP + PP+ + +++
Sbjct: 164 LGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTRFNSSS 200
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 87/319 (27%), Positives = 109/319 (34%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQY-NMSQPPYGGYPSQPTP 363
GY+Q QA S+GT G P+ Y Q A GQT + QPP GY + P
Sbjct: 28 GYAQTTQQAYGQQSYGTYGQPT--DVSYTQAQTTATYGQTAYATSYGQPP-AGYTTPTAP 84
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQP--PASGY 421
Y + + P P G
Sbjct: 85 QAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPARPQDGN 144
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAA-PYDQQQG-Y-----NSAAGYGNVNNTSQEGHTP 474
Q S GGY+ P GYGQ+ Y Q G Y + Y S
Sbjct: 145 KPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTRFNSSSLKLY 204
Query: 475 SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA--TQPSYGV-PPTS-- 529
Y STQ P S+ Q YG QPS SY Q + Q SYG PPTS
Sbjct: 205 HYSRSYSSTQ-PTSYDQSSYSQQNTYG---QPS----SYGQQSSYGQQSSYGQQPPTSYP 256
Query: 530 -QSGYGSQVPPQSGY--AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPP 586
Q+G SQ P Q + YG Q+ +P + G Q +GG+ PG + S P
Sbjct: 257 PQTGSYSQAPSQYSQQSSSYGQ-QSSFRQDHPSSMGVYGQE---SGGFSGPGENRSMSGP 312
Query: 587 SSYAQPDSGSQRAPPSNYG 605
+ + G R S G
Sbjct: 313 DNRGRGRGGFDRGGMSRGG 331
>WB|WBGene00019692 [details] [associations]
symbol:M01A10.1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 GO:GO:0006898 GO:GO:0003723 eggNOG:NOG300923
InterPro:IPR015096 Pfam:PF09005 GeneTree:ENSGT00650000093048
EMBL:FO081508 RefSeq:NP_491627.2 ProteinModelPortal:P91393
SMR:P91393 STRING:P91393 PaxDb:P91393 EnsemblMetazoa:M01A10.1
GeneID:187350 KEGG:cel:CELE_M01A10.1 UCSC:M01A10.1 CTD:187350
WormBase:M01A10.1 HOGENOM:HOG000018892 InParanoid:P91393
OMA:KARIMET NextBio:934978 Uniprot:P91393
Length = 586
Score = 177 (67.4 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 65/250 (26%), Positives = 110/250 (44%)
Query: 118 PVSYGGYQSMGT-SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPT 176
P G + S ++++P VG I+G G IK + ++ KIQ D + L
Sbjct: 225 PAGMAGNSPVAAMSLQVKVPRSTVGAIMGLQGSNIKKISNETETKIQFMPDDDPKLME-- 282
Query: 177 RSVELMGTPEQIAKAEQLINDVL-AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLV 235
R++ ++G ++ +L+ ++ A +E+ + I F M IP +K GLV
Sbjct: 283 RTLVVIGNKNKVYVCARLLQKIVEANSENANTPISL-----------FYMLIPASKCGLV 331
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
IG+GGETI+ + +GA + + P ++ E+ I G+ Q+E AK L+ + +
Sbjct: 332 IGRGGETIRQINKESGAYCE---MSRDPSISAIEKQFVIRGSETQVEHAKHLIRVKVGDI 388
Query: 296 RIRNPAMAGGYSQQ-GYQARPPT---SWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQ 351
P + +Q + + PT SW + Q QP A+ Q P M+
Sbjct: 389 PPNTPYINTRAAQPLQFSHQNPTAIDSWRAQPFTTQHQNSLSLPQPQAH--QFPNL-MAY 445
Query: 352 PPYGGYPSQP 361
GY S P
Sbjct: 446 SARLGYQSHP 455
Score = 160 (61.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 55/203 (27%), Positives = 98/203 (48%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP VG++IG++G I+ + +SG ++Q+ + + RSV++ G E I A+
Sbjct: 56 VSIPEESVGLVIGRNGVEIQAISQKSGCRVQIVAEPST---TGYRSVDIYGISENIEVAK 112
Query: 193 QLINDVLAEAESGGSGIVA------RRLTGQAGSDHFAM--KIPNNKVGLVIGKGGETIK 244
+LIN+V+A + + + + S + IP NK G +IGK GE ++
Sbjct: 113 KLINEVVARGRKLSQEPLPCSVPQFQPIPAVSNSSKVTIIIPIPANKCGAIIGKKGEQMR 172
Query: 245 NMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPA-MA 303
+++ T +I + + + +QI G +++E AK LV +++ PA MA
Sbjct: 173 KLRSWTNCDFILIQEN---NIADSVKPLQITGQPKEVEHAKALVADILDGFDECPPAGMA 229
Query: 304 GG--YSQQGYQARPPTSWGTPGA 324
G + Q + P S T GA
Sbjct: 230 GNSPVAAMSLQVKVPRS--TVGA 250
Score = 135 (52.6 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 224 AMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIES 283
++ IP VGLVIG+ G I+ + ++G R+Q++ P T R+V I G SE IE
Sbjct: 55 SVSIPEESVGLVIGRNGVEIQAISQKSGCRVQIVA---EPSTTGY-RSVDIYGISENIEV 110
Query: 284 AKQLVNEVISENR 296
AK+L+NEV++ R
Sbjct: 111 AKKLINEVVARGR 123
Score = 39 (18.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 306 YSQQ-GYQARPPTSWGTPGAPSMQQ 329
YS + GYQ+ PP A ++QQ
Sbjct: 445 YSARLGYQSHPPQHNSNVYASTIQQ 469
>UNIPROTKB|O57526 [details] [associations]
symbol:igf2bp3-b "Insulin-like growth factor 2 mRNA-binding
protein 3-B" species:8355 "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005783 GO:GO:0007275 GO:GO:0005634 GO:GO:0006417
GO:GO:0006355 GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003730 GO:GO:0051028 HSSP:Q9Y6M1
HOVERGEN:HBG052725 KO:K13197 EMBL:AF042353 EMBL:AF064633
EMBL:BC057700 RefSeq:NP_001079932.1 UniGene:Xl.240
ProteinModelPortal:O57526 SMR:O57526 GeneID:379623 KEGG:xla:379623
CTD:379623 Xenbase:XB-GENE-6255198 Uniprot:O57526
Length = 593
Score = 184 (69.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 89 NGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSG 148
N G F + G PPS S P SA +G Q + + IP + VG IIGK G
Sbjct: 380 NALGLFPPSSSGMP-PPSAGVSSPTTSASYPPFG-QQPESETVHLFIPALAVGAIIGKQG 437
Query: 149 ETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSG 208
+ IK L +GA I++ D + R V + G PE KA+ I L E G
Sbjct: 438 QHIKQLSRFAGASIKIAPAEGPD--AKLRMVIITGPPEAQFKAQGRIYGKLKEENFFGP- 494
Query: 209 IVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTST 268
+ +A H +K+P+ G VIGKGG+T+ +Q T A + V+P P D +
Sbjct: 495 --KEEVKLEA---H--IKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP-DEND 545
Query: 269 ERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARP 315
+ V+I G + A++ + E++++ R R +Q G Q +P
Sbjct: 546 QVVVKITGHFYASQLAQRKIQEILAQVR-RQQQQQQKTAQSG-QPQP 590
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 60/222 (27%), Positives = 98/222 (44%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
+P VG IIGK G TI+ + Q+ +KI + R A + + + + TPE + A ++
Sbjct: 211 VPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GAAEKPITIHSTPEGCSAACKI 268
Query: 195 INDVLA-EAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTG 251
I +++ EA+ + T + +KI NN VG +IGK G +K ++ T
Sbjct: 269 IMEIMQKEAQD-------TKFT-----EEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTD 316
Query: 252 ARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGY 311
+I + PL + ERT+ + G+ E A++ V + I E+ N A
Sbjct: 317 TKITISPLQ-DLTLYNPERTITVKGSIETCAKAEEEVMKKIRES-YENDIAAMNLQAHLI 374
Query: 312 QARPPTSWGT--PGAPSMQQPGYGYVQP---GAYP--GQTPQ 346
+ G P + M P G P +YP GQ P+
Sbjct: 375 PGLNLNALGLFPPSSSGMPPPSAGVSSPTTSASYPPFGQQPE 416
Score = 38 (18.4 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 15 KRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPA 54
+ YE+ + A G + + P S + +PPP+
Sbjct: 357 RESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGMPPPS 396
>UNIPROTKB|I3LP40 [details] [associations]
symbol:TDRKH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 InterPro:IPR002999
GO:GO:0005739 GO:GO:0003723 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00530000063224 OMA:FHADEYL EMBL:FP340554
Ensembl:ENSSSCT00000032144 Uniprot:I3LP40
Length = 558
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 41/136 (30%), Positives = 71/136 (52%)
Query: 130 SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIA 189
S+++ +P VG IIG+ GETI+ + SGAKI +++E L +R +++ GT +++A
Sbjct: 126 SEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLL-SRLIKISGTQKEVA 184
Query: 190 KAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNN-KVGLVIGKGGETIKNMQA 248
A+ LI + ++E E + +R+ A + K P + + V GG +
Sbjct: 185 AAKHLILEKVSEDEE-----LRKRIAHSAET-RVPRKQPISVRREEVRAPGGAGEPALWK 238
Query: 249 RTGARI-QVIPLHLPP 263
TG + Q PL +PP
Sbjct: 239 NTGPSLEQPAPLAVPP 254
Score = 118 (46.6 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 37/151 (24%), Positives = 68/151 (45%)
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESA 284
+ +P VG +IG+GGETI+++ +GA+I G R ++I GT +++ +A
Sbjct: 129 LSVPQRSVGRIIGRGGETIRSICKASGAKITCDKES--EGTLLLSRLIKISGTQKEVAAA 186
Query: 285 KQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQT 344
K L+ E +SE+ +A ++ + P S ++ PG G +P +
Sbjct: 187 KHLILEKVSEDEELRKRIAHS-AETRVPRKQPIS---VRREEVRAPG-GAGEPALWKNTG 241
Query: 345 PQYN----MSQPPYGGYPSQPTPGGYPGNWD 371
P ++ PP+ G G +W+
Sbjct: 242 PSLEQPAPLAVPPHKGGGDLAVIGPEESSWE 272
Score = 107 (42.7 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
++ +P V +IIG+ G IK L+ Q+GA+I V DTE D+ R + + G P Q+ KA
Sbjct: 56 EMRVPQESVKLIIGRQGANIKQLRKQTGARIDV--DTE-DIGDE-RVLLISGFPVQVCKA 111
Query: 192 EQLINDVLAE 201
+ I+ +L E
Sbjct: 112 KAAIHQILTE 121
>UNIPROTKB|Q17QV0 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0003723
GeneTree:ENSGT00550000074311 eggNOG:NOG315872 HOGENOM:HOG000182823
HOVERGEN:HBG053520 KO:K13162 CTD:54039 OMA:FWAPSVL
OrthoDB:EOG4XH00F EMBL:DAAA02003497 EMBL:DAAA02003498
EMBL:DAAA02003499 EMBL:DAAA02003500 EMBL:DAAA02003501 EMBL:BC118166
IPI:IPI00733966 RefSeq:NP_001069752.1 UniGene:Bt.27304 SMR:Q17QV0
Ensembl:ENSBTAT00000043482 GeneID:613725 KEGG:bta:613725
InParanoid:Q17QV0 NextBio:20898729 Uniprot:Q17QV0
Length = 361
Score = 172 (65.6 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 59/173 (34%), Positives = 85/173 (49%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ N P R
Sbjct: 5 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEG-----NCPERI 58
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDH---FAMKIPNNKVGLV 235
V + G + I KA +I E I+ A S + +P ++ G +
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEE------DIINSMSNSPATSKPPVTLRLVVPASQCGSL 112
Query: 236 IGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
IGKGG IK ++ TGA++QV LP STER V I GT + I + KQ+
Sbjct: 113 IGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 162
Score = 116 (45.9 bits), Expect = 0.00097, P = 0.00097
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
++ ++ IPN +G IIG+ G I ++ SGA+I++ TE S R + + GTP I
Sbjct: 284 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG---SSERQITITGTPANI 340
Query: 189 AKAEQLINDVLAEAESG 205
+ A+ LIN L +G
Sbjct: 341 SLAQYLINARLTSEVTG 357
Score = 108 (43.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 42/155 (27%), Positives = 74/155 (47%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKS--IPAPSAI 117
+ K+ E+ AR+ ++S E P R+ +G D+ K F+ + I + S
Sbjct: 34 ETVKKMREESGARI--NIS-EGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNS 90
Query: 118 PVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTR 177
P + + ++ +P + G +IGK G IK ++ +GA++QV D NS R
Sbjct: 91 PAT----SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTER 144
Query: 178 SVELMGTPEQIAKAEQLINDVLAEAESGGSGIVAR 212
+V + GTP+ I + + I V+ E+ G+ I R
Sbjct: 145 AVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Score = 95 (38.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 220 SDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSE 279
S H + IPN+ +G +IG+ G I ++ +GA+I++ + G S+ER + I GT
Sbjct: 284 STH-ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA--NATEG--SSERQITITGTPA 338
Query: 280 QIESAKQLVN 289
I A+ L+N
Sbjct: 339 NISLAQYLIN 348
Score = 42 (19.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 27/104 (25%), Positives = 39/104 (37%)
Query: 458 AAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQG 517
AA N++ Q P+Y QG P + + Q Q P +PP G
Sbjct: 200 AASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQ-----QTP------FPPLG 248
Query: 518 ATQPSYGVPPTSQSGYGSQVPPQSGYAGYG-MPQAQKPLANPPA 560
T P++ P G ++P S M Q+ A+PPA
Sbjct: 249 QTNPAF--P-------GEKLPLHSSEEAQNLMGQSSGLDASPPA 283
>DICTYBASE|DDB_G0269334 [details] [associations]
symbol:DDB_G0269334 "C2 calcium-dependent membrane
targeting domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168 SMART:SM00239
dictyBase:DDB_G0269334 EMBL:AAFI02000005 InterPro:IPR018029
SUPFAM:SSF49562 PROSITE:PS50004 RefSeq:XP_645884.1
ProteinModelPortal:Q55E97 PRIDE:Q55E97 EnsemblProtists:DDB0304643
GeneID:8616824 KEGG:ddi:DDB_G0269334 eggNOG:KOG1327 OMA:TIRDNQN
Uniprot:Q55E97
Length = 319
Score = 170 (64.9 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 56/159 (35%), Positives = 62/159 (38%)
Query: 419 SGY-NQQGQGYAQDSYGGYHAPQSG-YGQAAPYDQQQGYNSAAGYGNVNNTSQEG-HTPS 475
SGY Q + G Y++P G YGQA P Y GYG T Q +T
Sbjct: 2 SGYPGQANLNKNSPAPGQYNSPAPGQYGQA-P-GSYGSYPQQTGYGGQQQTQQYSQYTQQ 59
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGS 535
G TQ PP QQGY QQ P YPPQ P G PP Q GY
Sbjct: 60 TQQYGQYTQQPP---------QQGYPPQQQGYPPQQGYPPQQGYPPQQGYPP--QQGYPP 108
Query: 536 QVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGY 574
Q P GY Y + PAYG Q P + G Y
Sbjct: 109 QQPAYGGYGAY-QTTSYGAYQQQPAYGAYPQQP-AYGAY 145
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 52/152 (34%), Positives = 58/152 (38%)
Query: 460 GYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQ--- 516
G N+N S + A G QAP S Q GYG GQQ + + Y Q
Sbjct: 6 GQANLNKNSPAPGQYNSPAPGQYGQAPGSYGSYPQ--QTGYG-GQQQTQQYSQYTQQTQQ 62
Query: 517 -GA-TQ--PSYGVPPTSQSGYGSQVPPQSGYAGY-GMPQAQKPLANPPAYGQTQQSP--G 569
G TQ P G PP Q GY PPQ GY G P Q PP G Q P G
Sbjct: 63 YGQYTQQPPQQGYPP-QQQGY----PPQQGYPPQQGYPPQQ---GYPPQQGYPPQQPAYG 114
Query: 570 SAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPP 601
G Y Y Q P+ A P + A P
Sbjct: 115 GYGAYQTTSYGAYQQQPAYGAYPQQPAYGAYP 146
Score = 116 (45.9 bits), Expect = 0.00077, P = 0.00077
Identities = 35/76 (46%), Positives = 35/76 (46%)
Query: 300 PAMAGGYS-QQGY---QARPPTSWGTP--GAPSMQQPGYGYVQPGAYPGQTPQYN--MSQ 351
P GY QQGY Q PP P G P QQP YG GAY QT Y Q
Sbjct: 76 PPQQQGYPPQQGYPPQQGYPPQQGYPPQQGYPP-QQPAYGGY--GAY--QTTSYGAYQQQ 130
Query: 352 PPYGGYPSQPTPGGYP 367
P YG YP QP G YP
Sbjct: 131 PAYGAYPQQPAYGAYP 146
Score = 105 (42.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 30/75 (40%), Positives = 33/75 (44%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYN----SAAGYGNVN 465
G QPP GY Q QGY GY PQ GY Y QQGY + GYG
Sbjct: 64 GQYTQQPPQQGYPPQQQGYPPQQ--GY-PPQQGYPPQQGYPPQQGYPPQQPAYGGYGAYQ 120
Query: 466 NTSQEGHT--PSYGA 478
TS + P+YGA
Sbjct: 121 TTSYGAYQQQPAYGA 135
Score = 77 (32.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 27/77 (35%), Positives = 32/77 (41%)
Query: 302 MAG--GYSQQGYQARPPTSWGTPGAPSM--QQPG-YG-YVQPGAYPGQTP-----QYNMS 350
M+G G + + P + +P AP Q PG YG Y Q Y GQ QY
Sbjct: 1 MSGYPGQANLNKNSPAPGQYNSP-APGQYGQAPGSYGSYPQQTGYGGQQQTQQYSQYTQQ 59
Query: 351 QPPYGGYPSQPTPGGYP 367
YG Y QP GYP
Sbjct: 60 TQQYGQYTQQPPQQGYP 76
>UNIPROTKB|J9P7G2 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 EMBL:AAEX03026610
Ensembl:ENSCAFT00000027552 OMA:FGGRWGP Uniprot:J9P7G2
Length = 650
Score = 176 (67.0 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 73/212 (34%), Positives = 91/212 (42%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTS--QEGHTP 474
++ Y+ Q AQ Y GY A P GY Q Q G+ S YG + S Q T
Sbjct: 3 STDYSTYSQAAAQQGYSGYTAQPTQGYAQTT---QAYGHQSYGTYGQPTDVSYTQAQTTA 59
Query: 475 SYG--AQGDSTQAPPPVQSSAAMGQ------QGYGTGQQPSPNTASYPPQGATQPSYGVP 526
+YG A S PP ++ Q QGYG G + TA TQ SY
Sbjct: 60 TYGQTAYATSYGQPPAGYTTPTAPQAYIQPVQGYGAGAYDT-TTAMVT---TTQASYA-- 113
Query: 527 PTSQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP--GY 579
+QS YG+Q P Y YG P A P N PA +T Q S GGY QP GY
Sbjct: 114 --AQSTYGTQ--P--AYPAYGQQPAATAPARPQEGNKPA--ETSQPQSSIGGYNQPSLGY 165
Query: 580 ---SHSQPP-PSSYA-QPDSGSQRAPPSNYGA 606
++S P P SY QP + PP++Y +
Sbjct: 166 GQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSS 197
Score = 170 (64.9 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 71/217 (32%), Positives = 89/217 (41%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQS-GYGQA---APYDQQQGYNSAAGY--- 461
GYS Y+ P GY Q Q Y SYG Y P Y QA A Y Q Y ++ G
Sbjct: 17 GYSGYTAQPTQGYAQTTQAYGHQSYGTYGQPTDVSYTQAQTTATYGQT-AYATSYGQPPA 75
Query: 462 GNVNNTSQEGHT-P--SYGAQG-DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQG 517
G T+ + + P YGA D+T A ++ Q YGT QP+ YP G
Sbjct: 76 GYTTPTAPQAYIQPVQGYGAGAYDTTTAMVTTTQASYAAQSTYGT--QPA-----YPAYG 128
Query: 518 ATQPSYGVPPTSQSGY--GSQVPPQSGYAGYGMPQ---AQKPLANPPAYGQTQQSPGSAG 572
QP+ P Q G PQS GY P Q + P G P +A
Sbjct: 129 Q-QPAATAPARPQEGNKPAETSQPQSSIGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAP 187
Query: 573 -GYGQPGYSHSQPPP---SSYAQPDSGSQRAPPSNYG 605
Y YS +QP SSY+Q ++ Q PS+YG
Sbjct: 188 PSYPPTSYSSTQPTSYDQSSYSQQNTYGQ---PSSYG 221
Score = 157 (60.3 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 75/264 (28%), Positives = 90/264 (34%)
Query: 350 SQPPYGGYPSQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 409
+Q Y GY +QPT G
Sbjct: 14 AQQGYSGYTAQPTQGYAQTTQAYGHQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQP 73
Query: 410 GYSYSQPPA-SGYNQQGQGYAQDSYGGYHA----PQSGYGQAAPYDQQQGYNSAAGY--- 461
Y+ P A Y Q QGY +Y A Q+ Y + Y Q Y A G
Sbjct: 74 PAGYTTPTAPQAYIQPVQGYGAGAYDTTTAMVTTTQASYAAQSTYGTQPAY-PAYGQQPA 132
Query: 462 GNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQP 521
QEG+ P+ +Q S+ Q S GQ Y Q P SYP Q T P
Sbjct: 133 ATAPARPQEGNKPAETSQPQSSIGGYN-QPSLGYGQSNYSYPQVPG----SYPMQPVTAP 187
Query: 522 -SYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS 580
SY PPTS Y S P + Y Q P +YGQ QS YGQ S
Sbjct: 188 PSY--PPTS---YSSTQPTSYDQSSYSQ---QNTYGQPSSYGQ--QS-----SYGQQS-S 231
Query: 581 HSQPPPSSYAQPDSGSQRAPPSNY 604
+ Q PP+SY P +G PS Y
Sbjct: 232 YGQQPPTSYP-PQTGYYSQAPSQY 254
Score = 131 (51.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 78/295 (26%), Positives = 93/295 (31%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP-QYNMSQPP--YGGYPSQPTP 363
+QQGY T+ T G Q YG+ G Y T Y +Q YG +
Sbjct: 14 AQQGYSGY--TAQPTQGYAQTTQ-AYGHQSYGTYGQPTDVSYTQAQTTATYGQTAYATSY 70
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQ 423
G P + Y +QP Y Q
Sbjct: 71 GQPPAGYTTPTAPQAYIQPVQGYGAGAYDTTTAMVTTTQASYAAQSTYG-TQPAYPAYGQ 129
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAAPYDQQQ---GYNSAA-GYGNVNNTSQEGHTPSYGAQ 479
Q A PQ G A Q GYN + GYG +N S SY Q
Sbjct: 130 QPAATAPAR------PQEGNKPAETSQPQSSIGGYNQPSLGYGQ-SNYSYPQVPGSYPMQ 182
Query: 480 GDSTQAPP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ- 536
APP P S ++ Y NT P Q SYG QS YG Q
Sbjct: 183 --PVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYG----QQSSYGQQP 236
Query: 537 ---VPPQSGYAGYGMPQAQKPLANPPAYGQT----QQSPGSAGGYGQPGYSHSQP 584
PPQ+GY Y +Q + +YGQ Q P G YGQ S P
Sbjct: 237 PTSYPPQTGY--YSQAPSQYSQQSS-SYGQQSSFQQDHPSKMGVYGQESGGFSGP 288
Score = 121 (47.7 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 51/182 (28%), Positives = 72/182 (39%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
S PP S + Q Y Q SY + Q+ YGQ + Y QQ Y + YG TS T
Sbjct: 189 SYPPTSYSSTQPTSYDQSSY----SQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQT 244
Query: 474 PSYGAQGDSTQAPPPV-QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS- 531
Y +QAP Q S++ GQQ + QQ P+ G + P +QS
Sbjct: 245 GYY------SQAPSQYSQQSSSYGQQS--SFQQDHPSKMGV--YGQESGGFSGPGENQSM 294
Query: 532 -GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYA 590
G ++ + G+ GM + + G S G GG+ +PG + P
Sbjct: 295 SGTDNRGRGRGGFDHAGMSRGGRG-GGRGGMG----SAGERGGFNKPGGPMDEGPDLDLG 349
Query: 591 QP 592
P
Sbjct: 350 PP 351
Score = 76 (31.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 22/66 (33%), Positives = 26/66 (39%)
Query: 306 YSQQGYQA---RPPTSWGTPGAPSMQ-QPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP 361
Y Q Y +PP + TP AP QP GY GAY T +Q Y +
Sbjct: 61 YGQTAYATSYGQPPAGYTTPTAPQAYIQPVQGY-GAGAYDTTTAMVTTTQASYAAQSTYG 119
Query: 362 TPGGYP 367
T YP
Sbjct: 120 TQPAYP 125
Score = 47 (21.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 4 EPQYSSDG--TPSKRKYEDQTTPPSAAARRPTG-FSAPDPAVAPTSYNSVPP 52
+PQ S G PS + + P P +AP P+ PTSY+S P
Sbjct: 150 QPQSSIGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAP-PSYPPTSYSSTQP 200
>UNIPROTKB|J9NYY3 [details] [associations]
symbol:FLG2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001751 InterPro:IPR002048 InterPro:IPR011992
PROSITE:PS00303 PROSITE:PS50222 Prosite:PS00018 GO:GO:0005509
Gene3D:1.10.238.10 InterPro:IPR018247 GeneTree:ENSGT00530000063634
EMBL:AAEX03011063 EMBL:AAEX03011064 EMBL:AAEX03011065
Ensembl:ENSCAFT00000049887 OMA:RGHAGDS Uniprot:J9NYY3
Length = 2801
Score = 181 (68.8 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 84/328 (25%), Positives = 130/328 (39%)
Query: 303 AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNM------SQPPYGG 356
+ Y Q G + +S G G+ S Q P YG + G+ GQ+ +Y+ YG
Sbjct: 2110 SSSYGQYGSASGQTSSCGQHGSGSGQPPSYGQNRSGS--GQSSRYSHHGSGSGQSSGYGQ 2167
Query: 357 YPS---QPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYS- 412
Y S Q + G+ G+ G S
Sbjct: 2168 YRSGSGQSSRYGHHGSGSSQSSGFGQHESSSGESSGTEQGSGLGQSSSSGQNESGYGQSS 2227
Query: 413 -YSQPP-ASGYN----QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQ-GYNSAAGYG-NV 464
Y Q ASG QQG G Q S GYH +S GQ++ + Q + G ++G+G +
Sbjct: 2228 SYGQHGYASGQTSSCGQQGSGSGQSSRYGYH--ESVSGQSSGFGQHKFGSGQSSGFGQHG 2285
Query: 465 NNTSQEGHTPSYGAQ-GDST---QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ 520
+ +SQ +G++ G S+ Q S++ GQ G GQ S N+A + +
Sbjct: 2286 SGSSQSSSYGQHGSRSGQSSGFGQHESSSGQSSSYGQHGSAFGQ--SSNSAQHASRSGQS 2343
Query: 521 PSYGVPPTSQ---SGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP 577
S+G T SG+G +G+G Q + +YGQ G + G+GQ
Sbjct: 2344 SSFGQHGTGSGQSSGFGQHRFGSGQSSGFG--QHGSGTSQSSSYGQHGSGSGQSSGFGQH 2401
Query: 578 GYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
+ Q S + Q SG+ ++ S+YG
Sbjct: 2402 RFGSGQS--SGFGQHGSGTSQS--SSYG 2425
Score = 173 (66.0 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 79/325 (24%), Positives = 124/325 (38%)
Query: 303 AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPT 362
+ G+ Q + + + +G G+ S Q YG Q G+ GQ+ + + G Q +
Sbjct: 2265 SSGFGQHKFGSGQSSGFGQHGSGSSQSSSYG--QHGSRSGQSSGFGQHESSSG----QSS 2318
Query: 363 PGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYN 422
G G+ + + +SG+
Sbjct: 2319 SYGQHGS-----AFGQSSNSAQHASRSGQSSSFGQHGTGSGQSSGFGQHRFGSGQSSGFG 2373
Query: 423 QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQ-GYNSAAGYG-NVNNTSQEGHTPSYGA-Q 479
Q G G +Q S G H SG GQ++ + Q + G ++G+G + + TSQ +G+
Sbjct: 2374 QHGSGTSQSSSYGQHG--SGSGQSSGFGQHRFGSGQSSGFGQHGSGTSQSSSYGQHGSGS 2431
Query: 480 GDST---QAPPPVQSSAAMGQQGYGTGQQPS---PNTASYPPQGATQPSYGVPPTSQSG- 532
G S+ Q S+ GQ G GT Q S + S G Q G +S G
Sbjct: 2432 GQSSGFGQHRFGSGQSSGFGQHGSGTSQSSSYGQHESGSGQSSGFGQHGSGSGQSSGFGQ 2491
Query: 533 YGSQVPPQSGYA--GYGMPQA------QKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQP 584
+GS+ S Y G+G Q+ + + P +YGQ G + G+G G Q
Sbjct: 2492 HGSRSSQSSSYGQHGFGSGQSSGLGQHESGSSQPASYGQHGSRSGQSSGFGHHGSGSGQS 2551
Query: 585 PPSSYAQPDSGSQRAPP-SNYGAAT 608
SSY Q SGS + YG+ +
Sbjct: 2552 --SSYTQHRSGSGHSSGHGQYGSGS 2574
Score = 164 (62.8 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 59/199 (29%), Positives = 83/199 (41%)
Query: 418 ASGYNQQGQGYAQDSYGGYH----APQSGYGQ-AAPYDQQQGYNSAAGYGNVNNTSQEGH 472
+SGY Q G Q S G+H + SG+GQ + + G +G G + + Q H
Sbjct: 1968 SSGYGQYRSGSGQSSRYGHHGSGSSQSSGFGQHESSSGESSGTEQGSGLGQSSRSRQ--H 2025
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG 532
YG Q S++ GQQG G+ Q + SY G++Q S S SG
Sbjct: 2026 ESRYGQSSSYGQHGSASGQSSSCGQQGSGSSQS---SRYSYHESGSSQSSGFGHHGSGSG 2082
Query: 533 YGSQVPPQSGYAGY--GMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYA 590
S +G+ G Q +YGQ + G GQ G QPP SY
Sbjct: 2083 QSSSYTQHRSGSGHSSGHGQYGSGSGQSSSYGQYGSASGQTSSCGQHGSGSGQPP--SYG 2140
Query: 591 QPDSGS-QRAPPSNYGAAT 608
Q SGS Q + S++G+ +
Sbjct: 2141 QNRSGSGQSSRYSHHGSGS 2159
Score = 164 (62.8 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 76/307 (24%), Positives = 117/307 (38%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYN---MSQPPYGGYPSQP 361
GY Q + + +G G+ S Q GYG + G+ GQ+ +Y G+
Sbjct: 1944 GYGQHRSSSGQASRYGHHGSGSGQSSGYGQYRSGS--GQSSRYGHHGSGSSQSSGFGQHE 2001
Query: 362 TPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGY 421
+ G + +S Y
Sbjct: 2002 SSSGESSGTEQGSGLGQSSRSRQHESRYGQSSSYGQHGSASGQSSSCGQQGSGSSQSSRY 2061
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQ-GYNSAAGYGNVNNTSQEGHTPSYGAQG 480
+ G +Q S G+H SG GQ++ Y Q + G ++G+G + S G + SYG G
Sbjct: 2062 SYHESGSSQSSGFGHHG--SGSGQSSSYTQHRSGSGHSSGHGQYGSGS--GQSSSYGQYG 2117
Query: 481 DSTQAPPPVQSSAAMGQQGYGTGQQPS-PNTASYPPQGATQPSYGVPPTSQSGYGSQVPP 539
++ Q+S+ GQ G G+GQ PS S Q + +G SGYG Q
Sbjct: 2118 SASG-----QTSSC-GQHGSGSGQPPSYGQNRSGSGQSSRYSHHGSGSGQSSGYG-QYRS 2170
Query: 540 QSGYAG-YGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQR 598
SG + YG + ++ +GQ + S G + G Q G Q SS Q +SG +
Sbjct: 2171 GSGQSSRYGHHGSGSSQSS--GFGQHESSSGESSGTEQ-GSGLGQS--SSSGQNESGYGQ 2225
Query: 599 APPSNYG 605
+ S+YG
Sbjct: 2226 S--SSYG 2230
Score = 157 (60.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 74/315 (23%), Positives = 119/315 (37%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP---QYNMSQPPYGGY 357
+ + Y Q G ++ + +G + S Q YG Q G+ GQ+ Q+ +
Sbjct: 2289 SQSSSYGQHGSRSGQSSGFGQHESSSGQSSSYG--QHGSAFGQSSNSAQHASRSGQSSSF 2346
Query: 358 PSQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-YSYSQP 416
T G + G + +
Sbjct: 2347 GQHGTGSGQSSGFGQHRFGSGQSSGFGQHGSGTSQSSSYGQHGSGSGQSSGFGQHRFGSG 2406
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQ-GYNSAAGYG-NVNNTSQEGHTP 474
+SG+ Q G G +Q S G H SG GQ++ + Q + G ++G+G + + TSQ
Sbjct: 2407 QSSGFGQHGSGTSQSSSYGQHG--SGSGQSSGFGQHRFGSGQSSGFGQHGSGTSQSS--- 2461
Query: 475 SYGA-QGDSTQAPPPVQSSAAMGQQ-GYGTGQQPSPNTASYPPQG-ATQPSYGV------ 525
SYG + S Q+ Q + GQ G+G S ++SY G + S G+
Sbjct: 2462 SYGQHESGSGQSSGFGQHGSGSGQSSGFGQHGSRSSQSSSYGQHGFGSGQSSGLGQHESG 2521
Query: 526 --PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
P S +GS+ SG+ +G Q +Y Q + G + G+GQ G +Q
Sbjct: 2522 SSQPASYGQHGSRSGQSSGFGHHGSGSGQSS-----SYTQHRSGSGHSSGHGQYGSGSNQ 2576
Query: 584 PPPSSYAQPDSGSQR 598
SSY Q S S++
Sbjct: 2577 S--SSYGQYGSASRQ 2589
Score = 155 (59.6 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 60/190 (31%), Positives = 78/190 (41%)
Query: 410 GYSYS-QPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
GY S +SG+ Q G Q S G H SG Q++ Y Q G S G + S
Sbjct: 2256 GYHESVSGQSSGFGQHKFGSGQSSGFGQHG--SGSSQSSSYGQH-GSRSGQSSGFGQHES 2312
Query: 469 QEGHTPSYGAQGDST-QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPP 527
G + SYG G + Q+ Q ++ GQ GQ T S G Q +G
Sbjct: 2313 SSGQSSSYGQHGSAFGQSSNSAQHASRSGQSS-SFGQH---GTGSGQSSGFGQHRFGSGQ 2368
Query: 528 TSQSG-YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPP 586
+S G +GS S Y +G Q +GQ + G + G+GQ G SQ
Sbjct: 2369 SSGFGQHGSGTSQSSSYGQHGSGSGQSS-----GFGQHRFGSGQSSGFGQHGSGTSQS-- 2421
Query: 587 SSYAQPDSGS 596
SSY Q SGS
Sbjct: 2422 SSYGQHGSGS 2431
Score = 153 (58.9 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 68/286 (23%), Positives = 91/286 (31%)
Query: 323 GAPSMQQPGYGYVQPG-AYPGQTPQYNMSQPPYGGYPSQPTPGGYPGNWDXXXXXXXXXX 381
G+ + Q G+G + G A Q+ + GY + G +
Sbjct: 1910 GSGACQSSGFGQHESGSAQSSSHSQHRSGSGQFSGYGQHRSSSGQASRYGHHGSGSGQSS 1969
Query: 382 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQQGQGYAQDSYGGYHAPQS 441
G S S +QG G Q S H +S
Sbjct: 1970 GYGQYRSGSGQSSRYGHHGSGSSQSSGFGQHESSSGESSGTEQGSGLGQSSRSRQH--ES 2027
Query: 442 GYGQAAPYDQQ-QGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGY 500
YGQ++ Y Q ++ G + S + SY G S QSS G G
Sbjct: 2028 RYGQSSSYGQHGSASGQSSSCGQQGSGSSQSSRYSYHESGSS-------QSSG-FGHHGS 2079
Query: 501 GTGQQPS-PNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPP 559
G+GQ S S + YG S YG Q SG Q PP
Sbjct: 2080 GSGQSSSYTQHRSGSGHSSGHGQYGSGSGQSSSYG-QYGSASGQTS-SCGQHGSGSGQPP 2137
Query: 560 AYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
+YGQ + G + Y G Q S Y Q SGS ++ S YG
Sbjct: 2138 SYGQNRSGSGQSSRYSHHGSGSGQS--SGYGQYRSGSGQS--SRYG 2179
Score = 145 (56.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 77/309 (24%), Positives = 109/309 (35%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGY 366
S G +S G G+ S Q G+G Q G+ GQ+ Y P Q + G+
Sbjct: 1790 SSSGSSLGESSSCGQHGSGSCQSSGFG--QHGSGLGQSSSYG----PNSSTSRQSSSWGH 1843
Query: 367 PGNW---DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQ-----PPA 418
G+ SY Q +
Sbjct: 1844 YGSGLSQSSRHSQHGSSSQESSNYGRHRSGSSQSSGHSLHGSGSRESSSYGQHRSGSSQS 1903
Query: 419 SGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQ-GYNSAAGYGNVNNTSQEGHTPSYG 477
SG+ Q G G Q S G H +SG Q++ + Q + G +GYG + S G YG
Sbjct: 1904 SGHRQHGSGACQSSGFGQH--ESGSAQSSSHSQHRSGSGQFSGYGQ--HRSSSGQASRYG 1959
Query: 478 AQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQV 537
G + QSS GQ G+GQ + + G++Q S S SG S
Sbjct: 1960 HHGSGSG-----QSSG-YGQYRSGSGQS---SRYGHHGSGSSQSSGFGQHESSSGESSGT 2010
Query: 538 PPQSGYAGYGMP-QAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGS 596
SG Q + +YGQ + G + GQ G SQ S Y+ +SGS
Sbjct: 2011 EQGSGLGQSSRSRQHESRYGQSSSYGQHGSASGQSSSCGQQGSGSSQS--SRYSYHESGS 2068
Query: 597 QRAPPSNYG 605
++ S +G
Sbjct: 2069 SQS--SGFG 2075
Score = 139 (54.0 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 58/194 (29%), Positives = 74/194 (38%)
Query: 418 ASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYG 477
+SG+ Q G G Q S G H +S Q++ Y Q G+ S G + S SYG
Sbjct: 2473 SSGFGQHGSGSGQSSGFGQHGSRSS--QSSSYGQH-GFGSGQSSGLGQHESGSSQPASYG 2529
Query: 478 AQGDSTQAPPPVQSSAAMGQQGYGTGQQPS---PNTASYPPQGATQPSYGVPPTSQSG-Y 533
G + QSS G G G+GQ S + S G Q G +S G Y
Sbjct: 2530 QHGSRSG-----QSSG-FGHHGSGSGQSSSYTQHRSGSGHSSGHGQYGSGSNQSSSYGQY 2583
Query: 534 GSQVPPQSGYAGYGMPQAQKPL--------ANPPAYGQTQQSPGSAGGYGQPGYSHSQPP 585
GS S + Q P YG + G + G GQ G Q
Sbjct: 2584 GSASRQTSSCGQHASGSGQSPSYGQNRSGSGQSSRYGYHESGSGQSSGSGQHGSGLGQS- 2642
Query: 586 PSSYAQPDSGSQRA 599
SSY Q +SGS R+
Sbjct: 2643 -SSYGQHESGSSRS 2655
Score = 134 (52.2 bits), Expect = 0.00015, P = 0.00015
Identities = 46/191 (24%), Positives = 81/191 (42%)
Query: 418 ASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYG-NVNNTSQE-GHTP 474
+SG+ Q G G + S G H SG Q++ + Q G ++ +G + + T Q G +
Sbjct: 410 SSGFGQHGSGSGRSSGFGQHGSSSG--QSSGFGQHGSGSGQSSSFGQHGSGTGQSSGFSS 467
Query: 475 SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPS---PNTASYPPQGATQPSYGVPPTSQS 531
+G ++ S+ GQ G G+GQ + ++ + Q Y +S
Sbjct: 468 GFGQNCSGSEMSSSSGQSSGFGQCGSGSGQSSGFGQHGSGTHQTSSSGQHRYSSGQSSSF 527
Query: 532 GYGSQV--PPQSGY-AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSS 588
G+GS P G +G+ + Q+ A +YGQ G + +G S + P
Sbjct: 528 GFGSSTHQSPSFGTGSGHLLGSGQESTARQSSYGQHGSGSGQSSTFGNGSCSGNSSKPD- 586
Query: 589 YAQPDSGSQRA 599
Q +S S+++
Sbjct: 587 --QHESSSRKS 595
Score = 129 (50.5 bits), Expect = 0.00051, P = 0.00051
Identities = 56/191 (29%), Positives = 79/191 (41%)
Query: 419 SGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTSQEGHTPSYG 477
SG Q G G Q S G H SG GQ++ + Q G ++G+G ++S G + +G
Sbjct: 385 SGLGQHGSGSGQSSGFGQHG--SGSGQSSGFGQHGSGSGRSSGFGQHGSSS--GQSSGFG 440
Query: 478 AQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQV 537
G + QSS+ GQ G GTGQ S +S Q + SG+G Q
Sbjct: 441 QHGSGSG-----QSSS-FGQHGSGTGQ--SSGFSSGFGQNCSGSEMSSSSGQSSGFG-QC 491
Query: 538 PPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPP--PSSYAQPDSG 595
SG + G Q + GQ + S G + +G +H P S SG
Sbjct: 492 GSGSGQSS-GFGQHGSGTHQTSSSGQHRYSSGQSSSFGFGSSTHQSPSFGTGSGHLLGSG 550
Query: 596 SQR-APPSNYG 605
+ A S+YG
Sbjct: 551 QESTARQSSYG 561
Score = 129 (50.5 bits), Expect = 0.00051, P = 0.00051
Identities = 56/196 (28%), Positives = 83/196 (42%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTSQEGH 472
S +SG+ Q G G Q S G H SG GQ++ + Q G ++G+G + S G
Sbjct: 367 SSAQSSGFGQHGSGSGQYSGLGQHG--SGSGQSSGFGQHGSGSGQSSGFGQ--HGSGSGR 422
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA-TQPSYGVPPT-SQ 530
+ +G G S+ QSS GQ G G+GQ ++S+ G+ T S G Q
Sbjct: 423 SSGFGQHGSSSG-----QSSG-FGQHGSGSGQ-----SSSFGQHGSGTGQSSGFSSGFGQ 471
Query: 531 SGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYA 590
+ GS++ SG + G Q +GQ GQ YS Q SS+
Sbjct: 472 NCSGSEMSSSSGQSS-GFGQCGSGSGQSSGFGQHGSGTHQTSSSGQHRYSSGQS--SSFG 528
Query: 591 QPDSGSQRAPPSNYGA 606
S + ++P G+
Sbjct: 529 F-GSSTHQSPSFGTGS 543
Score = 129 (50.5 bits), Expect = 0.00051, P = 0.00051
Identities = 57/201 (28%), Positives = 78/201 (38%)
Query: 411 YSYSQPPASGYN------QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNV 464
+S S SG N Q G G Q S G H +SG GQ++ G ++G+G
Sbjct: 243 FSNSHQKGSGSNGFSKCGQYGSGSGQSSSFGQH--ESGSGQSSGCGHGSGSCQSSGFGQ- 299
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYG 524
+ S G + G + QSS GQ G G+GQ S Q + +G
Sbjct: 300 -HGSGSGQSSGLCQHGSGSG-----QSSG-FGQHGSGSGQSSGCGHGSGSCQSSGFGQHG 352
Query: 525 VPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQP 584
SG G V + +G+G Q GQ G + G+GQ G Q
Sbjct: 353 SGSGQYSGLGQHVSSSAQSSGFG--QHGSGSGQYSGLGQHGSGSGQSSGFGQHGSGSGQS 410
Query: 585 PPSSYAQPDSGSQRAPPSNYG 605
S + Q SGS R+ S +G
Sbjct: 411 --SGFGQHGSGSGRS--SGFG 427
Score = 129 (50.5 bits), Expect = 0.00051, P = 0.00051
Identities = 52/201 (25%), Positives = 78/201 (38%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTS 468
G+ +SG+ Q G G Q S H SG GQ++ + Q G ++G G+ + +
Sbjct: 286 GHGSGSCQSSGFGQHGSGSGQSSGLCQHG--SGSGQSSGFGQHGSGSGQSSGCGHGSGSC 343
Query: 469 QEGHTPSYGA-QGDSTQAPPPVQSSA---AMGQQGYGTGQQPSPNT-ASYPPQGATQPSY 523
Q +G+ G + V SSA GQ G G+GQ S Q + +
Sbjct: 344 QSSGFGQHGSGSGQYSGLGQHVSSSAQSSGFGQHGSGSGQYSGLGQHGSGSGQSSGFGQH 403
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
G SG+G +G+G Q +GQ G + +GQ G Q
Sbjct: 404 GSGSGQSSGFGQHGSGSGRSSGFG--QHGSSSGQSSGFGQHGSGSGQSSSFGQHGSGTGQ 461
Query: 584 PP--PSSYAQPDSGSQRAPPS 602
S + Q SGS+ + S
Sbjct: 462 SSGFSSGFGQNCSGSEMSSSS 482
Score = 126 (49.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 68/316 (21%), Positives = 105/316 (33%)
Query: 303 AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPG-AYPGQTPQYNMSQPPYGGYPSQP 361
+ G+ Q G +S+G + S Q +G+ G + + Q+ S Y
Sbjct: 1812 SSGFGQHGSGLGQSSSYGPNSSTSRQSSSWGHYGSGLSQSSRHSQHGSSSQESSNYGRHR 1871
Query: 362 TPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYS-QPPASG 420
+ G S +S
Sbjct: 1872 SGSSQSSGHSLHGSGSRESSSYGQHRSGSSQSSGHRQHGSGACQSSGFGQHESGSAQSSS 1931
Query: 421 YNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTSQEGHTPSYGAQ 479
++Q G Q + GY +S GQA+ Y G ++GYG + S G + YG
Sbjct: 1932 HSQHRSGSGQ--FSGYGQHRSSSGQASRYGHHGSGSGQSSGYGQYRSGS--GQSSRYGHH 1987
Query: 480 GD-STQAPPPVQSSAAMGQ-----QGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY 533
G S+Q+ Q ++ G+ QG G GQ S + + + SYG Q G
Sbjct: 1988 GSGSSQSSGFGQHESSSGESSGTEQGSGLGQ--SSRSRQHESRYGQSSSYG-----QHGS 2040
Query: 534 GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPD 593
S G G G Q+ + Y + + G+G G Q SSY Q
Sbjct: 2041 ASGQSSSCGQQGSGSSQSSR-------YSYHESGSSQSSGFGHHGSGSGQS--SSYTQHR 2091
Query: 594 SGSQRAPP-SNYGAAT 608
SGS + YG+ +
Sbjct: 2092 SGSGHSSGHGQYGSGS 2107
Score = 57 (25.1 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 303 AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG 355
+ G+ Q G + +S+G G+ S Q G Q G+ GQ P Y ++ G
Sbjct: 2097 SSGHGQYGSGSGQSSSYGQYGSASGQTSSCG--QHGSGSGQPPSYGQNRSGSG 2147
Score = 56 (24.8 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 139 RVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDV 198
R G G+SG+T + + Q TR T++ S T E G+ + + E+ +
Sbjct: 735 RQGTTHGQSGDTTGHAEYAHSGHGQATR-TQS---SRTGRRETSGS--ESSDTER--HSG 786
Query: 199 LAEAESGGSGIVARRLTGQAGSDHFAM-KIPNNKVGLVIGKGGETIKNMQARTG 251
+ +A SG S GQAGS H + G G+ G+T + Q+ G
Sbjct: 787 VPQAHSGSS-------RGQAGSQHGESGSSVQGRQGTTHGQSGDTTTHAQSVKG 833
Score = 51 (23.0 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 16/64 (25%), Positives = 22/64 (34%)
Query: 276 GTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV 335
G S E L S + Y Q G + +S G G+ S Q Y Y
Sbjct: 2005 GESSGTEQGSGLGQSSRSRQHESRYGQSSSYGQHGSASGQSSSCGQQGSGSSQSSRYSYH 2064
Query: 336 QPGA 339
+ G+
Sbjct: 2065 ESGS 2068
Score = 45 (20.9 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 201 EAESGGSGIVARRLTGQAGSDHFAM-KIPNNKVGLVIGKGGETIKNMQARTG 251
E SG ++ GQAGS H + G G+ G+T + Q+ G
Sbjct: 644 ERHSGVPQALSGSPRGQAGSQHGESGSSVQGRQGTTHGQSGDTTTHAQSGHG 695
Score = 44 (20.5 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 25/129 (19%), Positives = 50/129 (38%)
Query: 145 GKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAES 204
G +G++ ++ + Q + + S T + G+ + ++ ++ L+E S
Sbjct: 1209 GHAGDSARHSESQQRHRTNHGQSQSGHGQSDTGTGRRQGSRPRTSRHQE---SSLSEGHS 1265
Query: 205 GGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGET---IKNMQARTGARIQVIPLHL 261
SG G +GS N+ G G+ + + + Q +TG P H
Sbjct: 1266 EDSGREFSTTRGDSGSG------ARNQRGSTHGQSTDRSTQLGSRQGQTGTHRHSDPAHR 1319
Query: 262 PPGDTSTER 270
G ++ ER
Sbjct: 1320 DSGSSTRER 1328
>UNIPROTKB|E2RS29 [details] [associations]
symbol:E2RS29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 EMBL:AAEX03026460
Ensembl:ENSCAFT00000019701 Uniprot:E2RS29
Length = 538
Score = 174 (66.3 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 65/205 (31%), Positives = 85/205 (41%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTS--QEGHTP 474
++ Y+ Q AQ Y Y P GY Q QQ Y + YG + S Q T
Sbjct: 3 STDYSTYSQAAAQQGYSAYTTQPTQGYAQTTQAYGQQSYGT---YGQPTDVSYTQAQTTA 59
Query: 475 SYGAQGDSTQ-APPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY 533
+YG +T PP + Q Y Q +T +Y AT + +QS Y
Sbjct: 60 TYGQTAYATSYGQPPAGYTTPTAPQAYSQPVQ-GYSTGAYDTTTATVTTTQASYEAQSAY 118
Query: 534 GSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQP--GY---SHSQ 583
G+Q P Y YG P A P N PA +T Q S GGY QP GY ++S
Sbjct: 119 GTQ--P--AYPAYGQQPAATAPARPQDGNKPA--ETSQPQSSTGGYNQPSLGYGQSNYSY 172
Query: 584 PP-PSSYA-QPDSGSQRAPPSNYGA 606
P P SY QP + PP++Y +
Sbjct: 173 PQVPGSYPMQPVTAPPSYPPTSYSS 197
Score = 174 (66.3 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 71/216 (32%), Positives = 88/216 (40%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
GYS Y+ P GY Q Q Y Q SYG Y P Y Q Q + A YG +
Sbjct: 17 GYSAYTTQPTQGYAQTTQAYGQQSYGTYGQPTD-----VSYTQAQ---TTATYGQTAYAT 68
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA--TQPSYGVP 526
G P+ G +T P S QGY TG + Q + Q +YG
Sbjct: 69 SYGQPPA----GYTTPTAPQAYSQPV---QGYSTGAYDTTTATVTTTQASYEAQSAYGTQ 121
Query: 527 PTSQSGYGSQ----VP--PQSGY--AGYGMPQAQKPLANPPA--YGQTQQS-PGSAGGYG 575
P + YG Q P PQ G A PQ+ N P+ YGQ+ S P G Y
Sbjct: 122 P-AYPAYGQQPAATAPARPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP 180
Query: 576 -QPGYSHSQPPPSSYA--QPDSGSQR---APPSNYG 605
QP + PP+SY+ QP S Q+ PS+YG
Sbjct: 181 MQPVTAPPSYPPTSYSSTQPTSYDQQNTYGQPSSYG 216
Score = 142 (55.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 73/301 (24%), Positives = 97/301 (32%)
Query: 306 YSQQGYQA---RPPTSWGTPGAP-SMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP 361
Y Q Y +PP + TP AP + QP GY GAY T +Q Y +
Sbjct: 61 YGQTAYATSYGQPPAGYTTPTAPQAYSQPVQGY-STGAYDTTTATVTTTQASYEAQSAYG 119
Query: 362 TPGGYPG-NWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASG 420
T YP YSY Q P S
Sbjct: 120 TQPAYPAYGQQPAATAPARPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGS- 178
Query: 421 YNQQG----QGYAQDSYGGY----HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGH 472
Y Q Y SY + Q+ YGQ + Y QQ Y + YG TS
Sbjct: 179 YPMQPVTAPPSYPPTSYSSTQPTSYDQQNTYGQPSSYGQQSSYGQQSSYGQQLPTSYPPQ 238
Query: 473 TPSYGAQGDSTQAPPPV-QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS 531
T SY +QAP Q S++ GQQ + QQ P + G + P ++S
Sbjct: 239 TGSY------SQAPSQYSQQSSSYGQQS--SFQQDHPRSMGV--YGQESGGFSRPGENRS 288
Query: 532 GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQ 591
G P + G G+ + G+ GG+ +PG + P
Sbjct: 289 MSGPDNPGR-GRGGFDRGDMSR---GGRGGGRGGMGARERGGFNKPGGPMHEGPDLDLGP 344
Query: 592 P 592
P
Sbjct: 345 P 345
Score = 138 (53.6 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 82/304 (26%), Positives = 101/304 (33%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP-QYNMSQPP--YGGYPSQPTP 363
+QQGY A T+ T G Q YG G Y T Y +Q YG +
Sbjct: 14 AQQGYSAY--TTQPTQGYAQTTQ-AYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSY 70
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQ 423
G P + Y +QP Y Q
Sbjct: 71 GQPPAGYTTPTAPQAYSQPVQGYSTGAYDTTTATVTTTQASYEAQSAYG-TQPAYPAYGQ 129
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAA---PYDQQQGYNSAA-GYGNVNNTSQEGHTPSYGAQ 479
Q A PQ G A P GYN + GYG +N S SY Q
Sbjct: 130 QPAATAPAR------PQDGNKPAETSQPQSSTGGYNQPSLGYGQ-SNYSYPQVPGSYPMQ 182
Query: 480 GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVP- 538
APP ++ Q QQ NT P Q SYG QS YG Q+P
Sbjct: 183 --PVTAPPSYPPTSYSSTQPTSYDQQ---NTYGQPSSYGQQSSYG----QQSSYGQQLPT 233
Query: 539 ---PQSGYAGYGMPQAQKPLANPPAYGQT----QQSPGSAGGYGQPGYSHSQPPPS-SYA 590
PQ+G Y +Q + +YGQ Q P S G YGQ S+P + S +
Sbjct: 234 SYPPQTG--SYSQAPSQYSQQSS-SYGQQSSFQQDHPRSMGVYGQESGGFSRPGENRSMS 290
Query: 591 QPDS 594
PD+
Sbjct: 291 GPDN 294
Score = 137 (53.3 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 84/308 (27%), Positives = 106/308 (34%)
Query: 309 QGY----QARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQY-NMSQPPYGGYPSQPTP 363
QGY QA S+GT G P+ Y Q A GQT + QPP GY + P
Sbjct: 27 QGYAQTTQAYGQQSYGTYGQPT--DVSYTQAQTTATYGQTAYATSYGQPP-AGYTTPTAP 83
Query: 364 GGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQP--PASGY 421
Y + + P P G
Sbjct: 84 QAYSQPVQGYSTGAYDTTTATVTTTQASYEAQSAYGTQPAYPAYGQQPAATAPARPQDGN 143
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTP-SYGAQG 480
Q S GGY+ P GYGQ+ Y Q S Y T+ + P SY
Sbjct: 144 KPAETSQPQSSTGGYNQPSLGYGQSN-YSYPQVPGS---YPMQPVTAPPSYPPTSYS--- 196
Query: 481 DSTQAPPPVQSSAAMGQQGYGTGQQPS-PNTASYPPQGATQPSYGVPPTSQSGYGSQVPP 539
STQ P GQ GQQ S +SY Q T SY PP Q+G SQ P
Sbjct: 197 -STQ-PTSYDQQNTYGQPS-SYGQQSSYGQQSSYGQQLPT--SY--PP--QTGSYSQAPS 247
Query: 540 QSGY--AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
Q + YG Q+ +P + G Q +GG+ +PG + S P + + G
Sbjct: 248 QYSQQSSSYGQ-QSSFQQDHPRSMGVYGQE---SGGFSRPGENRSMSGPDNPGRGRGGFD 303
Query: 598 RAPPSNYG 605
R S G
Sbjct: 304 RGDMSRGG 311
>FB|FBgn0031617 [details] [associations]
symbol:CG15635 species:7227 "Drosophila melanogaster"
[GO:0005615 "extracellular space" evidence=IDA] [GO:0032504
"multicellular organism reproduction" evidence=IEP] GO:GO:0005615
EMBL:AE014134 GO:GO:0032504 GO:GO:0008168
GeneTree:ENSGT00700000104238 RefSeq:NP_608846.2 UniGene:Dm.26729
STRING:Q9VR13 EnsemblMetazoa:FBtr0300354 GeneID:33665
KEGG:dme:Dmel_CG15635 UCSC:CG15635-RB FlyBase:FBgn0031617
InParanoid:Q9VR13 OMA:IYPPSTG OrthoDB:EOG4G4F5X PhylomeDB:Q9VR13
GenomeRNAi:33665 NextBio:784677 ArrayExpress:Q9VR13 Bgee:Q9VR13
Uniprot:Q9VR13
Length = 1136
Score = 140 (54.3 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 54/163 (33%), Positives = 69/163 (42%)
Query: 463 NVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQ---GYGTGQQPSPNTASYPPQGAT 519
+V TS++GH P A +S PP GQQ G+ G PN+ YPP
Sbjct: 250 SVGPTSEDGHPPESQAPSNSGFVPPLAICYPPFGQQNQIGHQPGSHKPPNSGIYPPSTGW 309
Query: 520 QPSYGVPPTSQSGY--GSQVPPQSGYAGYGMPQAQKP--LANPPAYGQTQQSPGSAG--- 572
P G SQ G+ GSQ+PP SG +P + P + +PP Q P + G
Sbjct: 310 IPPSG--SLSQGGHPPGSQLPPNSGLPPGSIPPLRPPNQIGDPPG----SQMPSNLGIYP 363
Query: 573 ---GYGQPGYSHSQP--PPSSYAQPDS----GS-QRAPPSNYG 605
G+ P S Q PP S P+S GS PSN G
Sbjct: 364 PSMGWIPPSGSLIQGGHPPGSLYPPNSVLAPGSIPPLRPSNQG 406
Score = 128 (50.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 62/216 (28%), Positives = 84/216 (38%)
Query: 414 SQPPASGYNQQGQ--GYAQDSYGGYHAPQSGY-GQAAPYDQQQGYNSAAGYGNVNNTSQE 470
S PP NQ G G + G + P +G+ + P Q G + N+
Sbjct: 899 SIPPLRPPNQGGHPPGSQKPPNVGIYPPSTGWIPPSGPLTQ--GGHPPGSQVPSNSVLPP 956
Query: 471 G-----HTPSYGAQGDSTQAPP----PVQSSAAMG---QQGYGTGQQPSPNTASYPPQGA 518
G P+ G +Q PP P S +G Q G+ G Q PN+ YPP
Sbjct: 957 GSIPPLRPPNQGRHPPGSQVPPNTGLPPGSIPPLGSPNQIGHPPGSQKPPNSGIYPPSTG 1016
Query: 519 TQPSYGVPPTSQSGY--GSQVPPQSGYAGYGMPQAQKPLA--NPPAYGQTQQS---PGSA 571
+ P G P +Q G+ GS +PP +G +P + P +PP S PGS
Sbjct: 1017 SIPPSG--PLTQGGHPPGSLLPPNTGLPPGSIPPLRPPNQGRHPPGSQVPPNSVLPPGSI 1074
Query: 572 GGYGQP---GYS-HSQPPPSSYAQPDSGSQRAPPSN 603
G P G SQ P SS +P S+ P N
Sbjct: 1075 PPLGSPIQIGRPVGSQKPASSKIRPPPPSEPQNPDN 1110
Score = 127 (49.8 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 43/145 (29%), Positives = 58/145 (40%)
Query: 468 SQEGHTPSYGAQGDSTQAPP-PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
+Q GH P +T PP + Q G+ G Q PN YPP P G
Sbjct: 671 TQSGHPPG-SLLPPNTGLPPGSIPPLRPPNQGGHPPGSQKPPNVGIYPPSTGWIPPSG-- 727
Query: 527 PTSQSGY--GSQVPPQSGYAGYGMPQAQKP--LANPPAYGQTQQS---PGSAGGYGQPG- 578
P +Q G+ GS +PP +G +P P + +PP + S P S G G
Sbjct: 728 PLTQGGHPPGSLLPPNTGLPSGSIPPLGSPNQIGHPPGSQKPPNSGIYPPSTGSIPPSGP 787
Query: 579 YSHSQPPPSSYAQPDSG--SQRAPP 601
+ PP S P++G S PP
Sbjct: 788 LTQGGHPPGSLLPPNTGLPSGSIPP 812
Score = 122 (48.0 bits), Expect = 7.1e-08, Sum P(3) = 7.1e-08
Identities = 45/146 (30%), Positives = 62/146 (42%)
Query: 468 SQEGHTPSYGAQGDSTQAPP-PVQSSAAMGQQGYGTGQQPSPNTASYPPQ-GATQPSYGV 525
+Q GH P +T PP + + Q G+ G Q PN YPP G T PS G
Sbjct: 553 TQGGHPPG-SLLPPNTGLPPGSIPPLGSPNQIGHPPGSQKPPNVGIYPPSTGWTPPS-G- 609
Query: 526 PPTSQSGY--GSQVPPQSGYAGYGMPQAQKP--LANPPAYGQTQQS---PGSAGGYGQPG 578
P +Q G+ GS +PP +G +P P + +PP + P S G G
Sbjct: 610 -PLTQGGHPPGSLLPPNTGLPPGSIPPLGSPNQIGHPPGSQKPPNVGIYPPSTGWIPPSG 668
Query: 579 -YSHSQPPPSSYAQPDSGSQRAPPSN 603
+ S PP S P++G PP +
Sbjct: 669 PLTQSGHPPGSLLPPNTG---LPPGS 691
Score = 120 (47.3 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 44/148 (29%), Positives = 62/148 (41%)
Query: 468 SQEGHTPSYGAQGDSTQAP----PPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY 523
+Q GH P +T P PP+ S Q G+ G Q PN+ YPP + P
Sbjct: 730 TQGGHPPG-SLLPPNTGLPSGSIPPLGSP---NQIGHPPGSQKPPNSGIYPPSTGSIPPS 785
Query: 524 GVPPTSQSGY--GSQVPPQSGYAGYGMPQAQKP--LANPPAYGQTQQS---PGSAGGYGQ 576
G P +Q G+ GS +PP +G +P P + +PP + S P S G
Sbjct: 786 G--PLTQGGHPPGSLLPPNTGLPSGSIPPLGSPNQIGHPPGSQKPPNSGIYPPSTGWIPP 843
Query: 577 PG-YSHSQPPPSSYAQPDSGSQRAPPSN 603
G + PP S P++G PP +
Sbjct: 844 SGPLTQGGHPPGSLLPPNTG---LPPGS 868
Score = 119 (46.9 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 45/147 (30%), Positives = 61/147 (41%)
Query: 468 SQEGHTPSYGAQGDSTQAPP-PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
+Q GH P +T PP + + Q G+ G Q PN YPP P G
Sbjct: 612 TQGGHPPG-SLLPPNTGLPPGSIPPLGSPNQIGHPPGSQKPPNVGIYPPSTGWIPPSG-- 668
Query: 527 PTSQSGY--GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYG-QPGY-SHS 582
P +QSG+ GS +PP +G +P + P N + Q P + G Y G+ S
Sbjct: 669 PLTQSGHPPGSLLPPNTGLPPGSIPPLRPP--NQGGHPPGSQKPPNVGIYPPSTGWIPPS 726
Query: 583 QP------PPSSYAQPDSG--SQRAPP 601
P PP S P++G S PP
Sbjct: 727 GPLTQGGHPPGSLLPPNTGLPSGSIPP 753
Score = 117 (46.2 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 44/149 (29%), Positives = 63/149 (42%)
Query: 468 SQEGHTPSYGAQGDSTQAPP-PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
+Q GH P+ +T PP + Q G+ G Q PN YPP P +G
Sbjct: 494 TQGGH-PTGSLLPPNTGLPPGSIPPLRPPNQGGHPPGSQKPPNVGIYPPSTGWIPPFG-- 550
Query: 527 PTSQSGY--GSQVPPQSGYAGYGMPQAQKP--LANPPAYGQTQQSPGSAGGYG-QPGYSH 581
P +Q G+ GS +PP +G +P P + +PP Q P + G Y G++
Sbjct: 551 PLTQGGHPPGSLLPPNTGLPPGSIPPLGSPNQIGHPPG----SQKPPNVGIYPPSTGWTP 606
Query: 582 -SQP------PPSSYAQPDSGSQRAPPSN 603
S P PP S P++G PP +
Sbjct: 607 PSGPLTQGGHPPGSLLPPNTG---LPPGS 632
Score = 111 (44.1 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 43/141 (30%), Positives = 53/141 (37%)
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
Q GH P +S AP + Q G+ G PN YPP P G P
Sbjct: 377 QGGHPPGSLYPPNSVLAPGSIPPLRPSNQGGHPPGSLLPPNVGIYPPSTGWIPPSG--PL 434
Query: 529 SQSGY--GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQS--PGSAGGYGQPGYSHSQP 584
+Q G+ GSQVPP +P PL +P GQ S P + G Y P + P
Sbjct: 435 TQGGHPPGSQVPPNFVLPAGSIP----PLGSPNQIGQPPGSLLPPNVGIY--PPSTGWIP 488
Query: 585 PPSSYAQPDSGSQRAPPSNYG 605
P Q + P N G
Sbjct: 489 PSGPLTQGGHPTGSLLPPNTG 509
Score = 111 (44.1 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 58/203 (28%), Positives = 75/203 (36%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEG 471
S S PP NQ G G P SG Y G+ +G +Q G
Sbjct: 807 SGSIPPLGSPNQIGH-----PPGSQKPPNSGI-----YPPSTGWIPPSG-----PLTQGG 851
Query: 472 HTPSYGAQGDSTQAPP-PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQ 530
H P +T PP + + Q G+ G Q PN YPP + P + P +Q
Sbjct: 852 HPPG-SLLPPNTGLPPGSISPLGSPNQIGHPPGSQKPPNVGIYPPSTGSIPP--LRPPNQ 908
Query: 531 SGY--GSQVPPQSG-YA-GYGMPQAQKPLA---NPPAYGQTQQS---PGSAGGYGQPGYS 580
G+ GSQ PP G Y G PL +PP S PGS P +
Sbjct: 909 GGHPPGSQKPPNVGIYPPSTGWIPPSGPLTQGGHPPGSQVPSNSVLPPGSIPPLRPP--N 966
Query: 581 HSQPPPSSYAQPDSGSQRAPPSN 603
+ PP S P++G PP +
Sbjct: 967 QGRHPPGSQVPPNTG---LPPGS 986
Score = 103 (41.3 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 44/158 (27%), Positives = 60/158 (37%)
Query: 461 YGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAM---GQQGYGTGQQPSPNTASYPPQG 517
YG N Q+G+ P +S PPP + A Q G+ Q N+ PP
Sbjct: 158 YGPPN---QDGNPPGSQTPPNSELVPPPAIWNPAYEPPNQIGHPPESQAPTNSGFVPPPA 214
Query: 518 ATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPA---YGQTQQSPGSAGGY 574
P YG P + SQ PP SG+ P P P + + Q+P ++G
Sbjct: 215 IWNPPYGPPNPDGNPPESQTPPNSGFVP--PPAIWSPSVGPTSEDGHPPESQAPSNSGFV 272
Query: 575 GQPGYSHSQPP----------PSSYAQPDSGSQRAPPS 602
P + PP P S+ P+SG PPS
Sbjct: 273 --PPLAICYPPFGQQNQIGHQPGSHKPPNSGIY--PPS 306
Score = 98 (39.6 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 43/145 (29%), Positives = 59/145 (40%)
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQS---SAAMGQQGYGTGQQPSPNTASYPPQGATQ 520
+ + +Q GH P +S PP S S + Q G+ G PNT PP G+
Sbjct: 990 LGSPNQIGHPPGSQKPPNSGIYPPSTGSIPPSGPLTQGGHPPGSLLPPNTG-LPP-GSIP 1047
Query: 521 PSYGVPPTSQSGY--GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
P + P +Q + GSQVPP S +P PL +P G+ G +P
Sbjct: 1048 P---LRPPNQGRHPPGSQVPPNSVLPPGSIP----PLGSPIQIGRPV-------GSQKPA 1093
Query: 579 YSHSQPPPSSYAQPDSGSQRAPPSN 603
S +PPP S Q + P N
Sbjct: 1094 SSKIRPPPPSEPQNPDNVPKQPVKN 1118
Score = 96 (38.9 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 43/145 (29%), Positives = 60/145 (41%)
Query: 474 PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY 533
P+ G ST PP S + Q G+ G Q P+ + PP G+ P + P +Q +
Sbjct: 919 PNVGIYPPSTGWIPP---SGPLTQGGHPPGSQV-PSNSVLPP-GSIPP---LRPPNQGRH 970
Query: 534 --GSQVPPQSGYAGYGMPQAQKP--LANPPAYGQTQQS---PGSAGGYGQPG-YSHSQPP 585
GSQVPP +G +P P + +PP + S P S G G + P
Sbjct: 971 PPGSQVPPNTGLPPGSIPPLGSPNQIGHPPGSQKPPNSGIYPPSTGSIPPSGPLTQGGHP 1030
Query: 586 PSSYAQPDSG---SQRAP--PSNYG 605
P S P++G P P N G
Sbjct: 1031 PGSLLPPNTGLPPGSIPPLRPPNQG 1055
Score = 93 (37.8 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 40/144 (27%), Positives = 55/144 (38%)
Query: 477 GAQGDSTQAPP----PVQSSAAMG---QQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
G +Q PP P S +G Q G G PN YPP P G P +
Sbjct: 437 GGHPPGSQVPPNFVLPAGSIPPLGSPNQIGQPPGSLLPPNVGIYPPSTGWIPPSG--PLT 494
Query: 530 QSGY--GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ-----PGY--- 579
Q G+ GS +PP +G +P + P N + Q P + G Y P +
Sbjct: 495 QGGHPTGSLLPPNTGLPPGSIPPLRPP--NQGGHPPGSQKPPNVGIYPPSTGWIPPFGPL 552
Query: 580 SHSQPPPSSYAQPDSGSQRAPPSN 603
+ PP S P++G PP +
Sbjct: 553 TQGGHPPGSLLPPNTG---LPPGS 573
Score = 70 (29.7 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 16/49 (32%), Positives = 20/49 (40%)
Query: 5 PQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
P S+ P K + PP R PT + P P PT + PPP
Sbjct: 45 PTPSAPAPPPKPRPPPPPPPPPTTTRPPT--TTPTPTTTPTPITTPPPP 91
Score = 64 (27.6 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 289 NEVISENRIRNPAMAGGYSQQGY--QARPPTSWGTPGAPSMQQPGYGYVQPGAYP--GQT 344
+E++ I NPA +Q G+ +++ PT+ G P++ P YG P P QT
Sbjct: 176 SELVPPPAIWNPAYEPP-NQIGHPPESQAPTNSGFVPPPAIWNPPYGPPNPDGNPPESQT 234
Query: 345 PQYNMSQPPYGGY-PSQ-PTP-GGYP 367
P + PP + PS PT G+P
Sbjct: 235 PPNSGFVPPPAIWSPSVGPTSEDGHP 260
Score = 61 (26.5 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 8 SSDGTP--SKRKYEDQTTPPSA----AARRPTGFSAPDPAVAPTSYNSVPPPA 54
+ DG P S+ + PP A A P P + APT+ VPPPA
Sbjct: 162 NQDGNPPGSQTPPNSELVPPPAIWNPAYEPPNQIGHPPESQAPTNSGFVPPPA 214
Score = 58 (25.5 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 18/55 (32%), Positives = 21/55 (38%)
Query: 315 PPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPGN 369
P T G P P Q P + PG+ P P PP P P G PG+
Sbjct: 936 PLTQGGHP--PGSQVPSNSVLPPGSIPPLRPPNQGRHPPGSQVP--PNTGLPPGS 986
Score = 57 (25.1 bits), Expect = 8.3e-08, Sum P(3) = 8.3e-08
Identities = 25/78 (32%), Positives = 30/78 (38%)
Query: 293 SENRIRNPAMAGGYSQQGYQARPP-TSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQ 351
S N+I +P G PP T W P P + Q G+ P PG N
Sbjct: 638 SPNQIGHPP--GSQKPPNVGIYPPSTGWIPPSGP-LTQSGH----P---PGSLLPPNTGL 687
Query: 352 PPYGGYPS--QPTPGGYP 367
PP G P P GG+P
Sbjct: 688 PP-GSIPPLRPPNQGGHP 704
Score = 53 (23.7 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 17/55 (30%), Positives = 22/55 (40%)
Query: 315 PPTSWGTPGA--PSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYP 367
PP+ + G P Q P + PG+ P P + PP PS G YP
Sbjct: 311 PPSGSLSQGGHPPGSQLPPNSGLPPGSIPPLRPPNQIGDPPGSQMPSNL--GIYP 363
Score = 53 (23.7 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 10 DGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPP 52
DG P E QT P S P +S P+V PTS + PP
Sbjct: 226 DGNPP----ESQTPPNSGFVPPPAIWS---PSVGPTSEDGHPP 261
Score = 51 (23.0 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 22/72 (30%), Positives = 27/72 (37%)
Query: 304 GGYSQQGYQA---RPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ 360
G +Q G+Q +PP S P + P Q G PG N PP G P
Sbjct: 283 GQQNQIGHQPGSHKPPNSGIYPPSTGWIPPSGSLSQGGHPPGSQLPPNSGLPP-GSIPPL 341
Query: 361 PTP---GGYPGN 369
P G PG+
Sbjct: 342 RPPNQIGDPPGS 353
Score = 51 (23.0 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 24/78 (30%), Positives = 30/78 (38%)
Query: 293 SENRIRNPAMAGGYSQQGYQARPP-TSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQ 351
S N+I +P G PP T W P P + Q G+ P PG N
Sbjct: 579 SPNQIGHPP--GSQKPPNVGIYPPSTGWTPPSGP-LTQGGH----P---PGSLLPPNTGL 628
Query: 352 PPYGGYPSQPTPG--GYP 367
PP G P +P G+P
Sbjct: 629 PP-GSIPPLGSPNQIGHP 645
Score = 50 (22.7 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 16/35 (45%), Positives = 17/35 (48%)
Query: 24 PPSAAARRPTGFSAPD--PAVAPTSYNS--VPPPA 54
PP A P G PD P + T NS VPPPA
Sbjct: 211 PPPAIWNPPYGPPNPDGNPPESQTPPNSGFVPPPA 245
Score = 47 (21.6 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 14/39 (35%), Positives = 15/39 (38%)
Query: 315 PPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP 353
PP P P PG Y P Y G PQ+ PP
Sbjct: 89 PPPPPSAPPPPDPATPGVWYPLP-IY-GNAPQFG--DPP 123
Score = 47 (21.6 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 23/82 (28%), Positives = 29/82 (35%)
Query: 295 NRIRNPAMAGGYSQQGYQARPPT-SWGTPGAPSMQ---QPGYGY-----VQPGAYPGQTP 345
N+I +P G PP+ W P +Q PG Y + PG+ P P
Sbjct: 345 NQIGDPP--GSQMPSNLGIYPPSMGWIPPSGSLIQGGHPPGSLYPPNSVLAPGSIPPLRP 402
Query: 346 QYNMSQPPYGGYPSQPTPGGYP 367
PP P P G YP
Sbjct: 403 SNQGGHPPGSLLP--PNVGIYP 422
Score = 47 (21.6 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 23/101 (22%), Positives = 35/101 (34%)
Query: 24 PPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSVSAEAK 83
PP+ P P+ + P S +PP Q S+
Sbjct: 697 PPNQGGHPPGSQKPPNVGIYPPSTGWIPPSGPLTQGGHPPGSLLPPNTGLPSGSIPPLGS 756
Query: 84 RPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGY 124
++ + G + G PPS SIP PS P++ GG+
Sbjct: 757 PNQIGHPPGSQKPPNSGIY-PPST-GSIP-PSG-PLTQGGH 793
Score = 46 (21.3 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 17/71 (23%), Positives = 25/71 (35%)
Query: 299 NPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
NP + G+ PP W P+ + Q + G P + PP+G
Sbjct: 228 NPPESQTPPNSGF-VPPPAIWSPSVGPTSEDGHPPESQAPSNSGFVPPLAICYPPFG--- 283
Query: 359 SQPTPGGYPGN 369
Q G PG+
Sbjct: 284 QQNQIGHQPGS 294
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 16/55 (29%), Positives = 19/55 (34%)
Query: 314 RPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP-SQPTPGGYP 367
+PP S P + P Q G PG N PP P P G+P
Sbjct: 827 KPPNSGIYPPSTGWIPPSGPLTQGGHPPGSLLPPNTGLPPGSISPLGSPNQIGHP 881
Score = 42 (19.8 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 24 PPSAAARRPTGFSAPDPAVAPTSYNSVPP 52
PP+ P P+ + P S +PP
Sbjct: 520 PPNQGGHPPGSQKPPNVGIYPPSTGWIPP 548
Score = 41 (19.5 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 15/42 (35%), Positives = 16/42 (38%)
Query: 12 TPSKRKYEDQTTP-PSAAARRPTGFSAPDPAVAPTSYNSVPP 52
TP Y P PSA A P P P PT+ PP
Sbjct: 33 TPFHFPYVPDNFPTPSAPAPPPKPRPPPPPPPPPTTTR--PP 72
>UNIPROTKB|E1B925 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042921
"glucocorticoid receptor signaling pathway" evidence=IEA]
[GO:0030521 "androgen receptor signaling pathway" evidence=IEA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006337
"nucleosome disassembly" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0042921 GO:GO:0045893 GO:GO:0030521 GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0016514 OMA:GSQYGPQ GO:GO:0030520
GO:GO:0006337 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:DAAA02006369
EMBL:DAAA02006370 EMBL:DAAA02006371 IPI:IPI01000128
Ensembl:ENSBTAT00000001360 Uniprot:E1B925
Length = 2112
Score = 152 (58.6 bits), Expect = 8.8e-10, Sum P(3) = 8.8e-10
Identities = 67/215 (31%), Positives = 80/215 (37%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G Y Y QG AQ + GG Q Q PY QQ +GYG Q
Sbjct: 247 GQPYGSQTPQRYPMTMQGRAQSTMGGLSYAQ----QIPPYGQQ----GPSGYG------Q 292
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGT-GQQPSPNTASYPPQ-GATQPSYGVPP 527
+G TP Y Q Q P S Q + Q P S PPQ ++QP Y P
Sbjct: 293 QGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQ--SQPPQLQSSQPPYSQQP 350
Query: 528 TSQSGYGSQVP-PQSGYAGYGMPQAQKPLANPPA---YGQTQ-QSPGSA-----GGYGQP 577
+ S P P + PQ+Q P + P A Y Q Q Q P S+ Y QP
Sbjct: 351 SQPPHQPSPTPYPSQQSSTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQP 410
Query: 578 GYSHSQ---------PPPSSYAQPDSGSQRAP-PS 602
SQ PPP +Q GSQ + PS
Sbjct: 411 QSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPS 445
Score = 141 (54.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 69/206 (33%), Positives = 75/206 (36%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
YS Q P SG QQG GY YG PQ Y Q + + Q+
Sbjct: 229 YSQQQGPPSG-PQQGHGYPGQPYGS-QTPQR-YPMTMQGRAQSTMGGLSYAQQIPPYGQQ 285
Query: 471 GHTPS-YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
G PS YG QG Q P Q S QQ QQP T P QP PP
Sbjct: 286 G--PSGYGQQG---QTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQ-SQPPQL 339
Query: 530 QSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG----YSHSQP- 584
QS SQ PP S P P P TQQ P S Y QP Y QP
Sbjct: 340 QS---SQ-PPYSQQPSQP-PHQPSPTPYPSQQSSTQQHPQSQPPYSQPQAQSPYQQQQPQ 394
Query: 585 -PPSSY-----AQPDSGSQRAPPSNY 604
P SS A P SQ++ + Y
Sbjct: 395 QPASSTLSQQAAYPQPQSQQSQQTAY 420
Score = 131 (51.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 76/315 (24%), Positives = 103/315 (32%)
Query: 306 YSQQG---YQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP- 361
Y+QQ Q +PP S P QP Y QP + P PQ SQPPY PSQP
Sbjct: 299 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQ-QPQSQP---PQLQSSQPPYSQQPSQPP 354
Query: 362 ---TPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPA 418
+P YP Y Q
Sbjct: 355 HQPSPTPYPSQQSSTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQ 414
Query: 419 S---GYNQQG----QGYAQDSYGGY--HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
S Y+QQ Q +QDS+G AP + D S ++ + S
Sbjct: 415 SQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPS--SLPDLSG 472
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQP-SPNTASYPPQGATQPSYGVPPT 528
G +G + S++ G+Q Q P SP+T+ + P G PS P+
Sbjct: 473 SIDDLPMGTEGALSPGVSTSGISSSQGEQS-NPAQSPFSPHTSPHLP-GIRGPS----PS 526
Query: 529 SQSGYGSQVPPQSG-YAGYGMPQAQKPLANPPAYGQTQQSPG-SAGGYGQP-GYSHSQPP 585
S +SG + +P Q P P + P + Q GY P
Sbjct: 527 PVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQ 586
Query: 586 PSSYAQPDSGSQRAP 600
Y+ P GS +P
Sbjct: 587 MPQYSSPQPGSALSP 601
Score = 130 (50.8 bits), Expect = 0.00029, P = 0.00029
Identities = 78/295 (26%), Positives = 95/295 (32%)
Query: 304 GGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTP 363
GG A P + G P+ Q Y Y AYP Y +S P GG P
Sbjct: 13 GGVGGGXPYAGPQQNSHDHGFPNHQYNSY-YPNRSAYPPPPQAYALSSPR-GGTPGSGAA 70
Query: 364 GGYPGNWD--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGY 421
G+ + +Q S
Sbjct: 71 AAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAAGGTPQPTATPTLNQLLTSPS 130
Query: 422 NQQG-QGYAQDSYGGYHAPQSGYGQAAPYDQ-QQGYNSAAGYGNVNNTSQEGHTPSYGAQ 479
+ +G QGY YGG PQ G P D Q + +AA + S GAQ
Sbjct: 131 SARGYQGYPGGDYGG--GPQDGGAGKGPADMASQCWGAAAA------AAAAAAAASGGAQ 182
Query: 480 GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPP 539
S AP SS GQ T Q SP + QP G P SQ G P
Sbjct: 183 QRSHHAPMSPGSSGGGGQPLVRTPQPSSP--MDQMGKMRPQPYGGTNPYSQQ-QGPPSGP 239
Query: 540 QSGYAGY-GMPQ-AQKPLANPPAY-GQTQQSPGSAGGYGQPGYSHSQPPPSSYAQ 591
Q G+ GY G P +Q P P G+ Q + G Y Q + Q PS Y Q
Sbjct: 240 QQGH-GYPGQPYGSQTPQRYPMTMQGRAQSTMGGLS-YAQQIPPYGQQGPSGYGQ 292
Score = 118 (46.6 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 51/174 (29%), Positives = 66/174 (37%)
Query: 417 PASGYNQQGQG-YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
P+ G G G Y Q+S G Y S YG Y +Q YN+ N + G
Sbjct: 604 PSGGQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPN-ANYPSAGMAGSMNP 662
Query: 476 YGAQGDSTQAPP-PVQSSAAMGQQGYGT-GQQP-SPNTASYPPQ---GATQPSYGVP-PT 528
GA G P P + G+ + + G +P PN A+ PPQ G P G+ T
Sbjct: 663 MGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKT 722
Query: 529 SQSGYGSQVPP---QSGYAGY-GMPQAQKPLANPPAYGQTQQS-PGSAGGYGQP 577
++ V Q+ GY M Q PP YGQ S G G P
Sbjct: 723 QETAVAMHVAANSIQNRPPGYPNMNQGGIMGTGPP-YGQGINSMAGMINPQGPP 775
Score = 109 (43.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 59/206 (28%), Positives = 74/206 (35%)
Query: 412 SYSQPPASGYNQQGQGYAQDSY-GGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
SY +P Y + D + P G G PY + G G GNV ++
Sbjct: 1053 SY-EPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGD--PYSRAAG----PGLGNVAMGPRQ 1105
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQG-YGTGQQPSPNTA-SYPPQGATQPSYGVPPT 528
H P YG D + P + G +G GTG P PN S P G PS PP
Sbjct: 1106 -HYP-YGGPYDRVRTEPGI------GPEGNMGTGA-PQPNLMPSNPDSGMYSPSR-YPPQ 1155
Query: 529 SQS-------GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA--GGYGQPGY 579
Q YG+Q Q +G P Q + Y Q QQ+ G YG P
Sbjct: 1156 QQQQQQRRHDSYGNQFSAQGTPSGSPFPSQQTTM-----YQQQQQNYKRPMDGTYGPPAK 1210
Query: 580 SHS---QPPPSSYAQPDSGSQRAPPS 602
H P S Q Q+ PP+
Sbjct: 1211 RHEGEMYSVPYSAGQGQPQQQQLPPA 1236
Score = 105 (42.0 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 59/205 (28%), Positives = 75/205 (36%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
Y Y P + G G + G APQ P + G S + Y Q+
Sbjct: 1107 YPYGGPYDRVRTEPGIG--PEGNMGTGAPQPNL---MPSNPDSGMYSPSRYPPQQQQQQQ 1161
Query: 471 GHTPSYG----AQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
SYG AQG + +P P Q + QQ QQ P G +YG P
Sbjct: 1162 RRHDSYGNQFSAQGTPSGSPFPSQQTTMYQQQ-----QQ----NYKRPMDG----TYGPP 1208
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQK-PLANPPAYGQTQ--QSPGSAGGYGQPGYSHSQ 583
G VP AG G PQ Q+ P A PP Q Q Q P Y Q Y ++
Sbjct: 1209 AKRHEGEMYSVPYS---AGQGQPQQQQLPPAQPPPANQQQAAQPPPQQDVYNQ--YGNAY 1263
Query: 584 PPPSSYA---QPDSGSQRAPPSNYG 605
P ++ A +P G Q P +G
Sbjct: 1264 PATAAAATERRPAGGPQNQFPFQFG 1288
Score = 94 (38.1 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 57/208 (27%), Positives = 72/208 (34%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G YS P ++G QGQ Q P + A P QQ YN YGN +
Sbjct: 1214 GEMYSVPYSAG---QGQPQQQQLPPAQPPPANQQQAAQPPPQQDVYNQ---YGNAYPATA 1267
Query: 470 EGHT---PSYGAQG--------DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPP--Q 516
T P+ G Q D APP + M Q G Q S A Q
Sbjct: 1268 AAATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQ 1327
Query: 517 GATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLAN---P-PAYGQTQQSPGSAG 572
G +Y +G Q P G AN P P++G T+Q P
Sbjct: 1328 GRNDMTYNYANRQSTGSAPQGPTYHGVNRTDEMLHTDQRANHEGPWPSHG-TRQPPY--- 1383
Query: 573 GYGQPGYSHSQPPPSSYAQPDSGSQRAP 600
G P ++PPP++Y P S P
Sbjct: 1384 GPSAPVPPMTRPPPANYQPPPSMQNHIP 1411
Score = 82 (33.9 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 29/77 (37%), Positives = 29/77 (37%)
Query: 306 YSQQGYQARPPTSWG----TPGAPSMQQ--PGYGYVQPGAY--PGQTPQYNMS------- 350
Y Q Q P T G T G S Q P YG P Y GQTP YN
Sbjct: 250 YGSQTPQRYPMTMQGRAQSTMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQ 309
Query: 351 QPPYGGYPSQPTPGGYP 367
QPPY P TP P
Sbjct: 310 QPPYSQQPPSQTPHAQP 326
Score = 80 (33.2 bits), Expect = 8.8e-10, Sum P(3) = 8.8e-10
Identities = 29/84 (34%), Positives = 36/84 (42%)
Query: 301 AMAGGYSQQGYQA-RPPTSWGTPGAPSMQ--QPG-----YGYVQPGAYPGQTPQYNMSQP 352
A +GG Q+ + A P S G G P ++ QP G ++P Y G P P
Sbjct: 176 AASGGAQQRSHHAPMSPGSSGGGGQPLVRTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGP 235
Query: 353 PYG-----GYPSQP----TPGGYP 367
P G GYP QP TP YP
Sbjct: 236 PSGPQQGHGYPGQPYGSQTPQRYP 259
Score = 50 (22.7 bits), Expect = 8.8e-10, Sum P(3) = 8.8e-10
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 6 QYSSDGTPSKRKYEDQTTPPSA-AARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAK 64
QY+S P++ Y PP A A P G P A + S PPP+ ++
Sbjct: 37 QYNSY-YPNRSAYPP---PPQAYALSSPRG-GTPGSGAAAAAAGSKPPPSSSASASSSSS 91
Query: 65 RRAEQ 69
A+Q
Sbjct: 92 SFAQQ 96
Score = 46 (21.3 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 31/123 (25%), Positives = 40/123 (32%)
Query: 5 PQYSSDGTPSKRK---YEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPAD-EFQDF 60
P ++ GTP T PS+A R G+ D P + PAD Q +
Sbjct: 106 PSAAAGGTPQPTATPTLNQLLTSPSSA-RGYQGYPGGDYGGGPQDGGAGKGPADMASQCW 164
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVS 120
AA A AA + P SGG P S + + P
Sbjct: 165 GAAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLVRTPQPSSPMDQMGKMR--PQP 222
Query: 121 YGG 123
YGG
Sbjct: 223 YGG 225
Score = 41 (19.5 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 26/102 (25%), Positives = 37/102 (36%)
Query: 24 PPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSVSAEAK 83
PP A A P A + S PPP+ +A +S S+ A+
Sbjct: 51 PPQAYALSSPRGGTPGSGAAAAAAGSKPPPSS---------------SASASSSSSSFAQ 95
Query: 84 RPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQ 125
+ G GG SA G + P+ ++ P S GYQ
Sbjct: 96 QRFGAMGGGG-PSAAAGGTPQPTATPTLNQLLTSPSSARGYQ 136
>WB|WBGene00004157 [details] [associations]
symbol:pqn-75 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA]
GeneTree:ENSGT00700000104238 EMBL:FO080786 GeneID:177165
KEGG:cel:CELE_W03D2.1 CTD:177165 UCSC:W03D2.1a NextBio:895628
PIR:T28770 RefSeq:NP_741366.1 ProteinModelPortal:Q8MQG9
PRIDE:Q8MQG9 EnsemblMetazoa:W03D2.1c WormBase:W03D2.1c
InParanoid:Q8MQG9 OMA:QGGNQNG ArrayExpress:Q8MQG9 Uniprot:Q8MQG9
Length = 539
Score = 147 (56.8 bits), Expect = 8.8e-10, Sum P(3) = 8.8e-10
Identities = 63/210 (30%), Positives = 82/210 (39%)
Query: 410 GYSYSQPPASGYNQQGQGYA--QDSYGGY----HAPQS-GYGQAAPYDQQQGYNSAAGYG 462
G + S PP G++ QG+ Q +GG APQ G Q + QG G
Sbjct: 145 GRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFSEAPQGFGNNQQGGFGGNQGNQGGFGGQ 204
Query: 463 NVNNTSQEGHTPSYGA-QGDSTQAPPPVQSSAAMGQQ---GYGTGQQPSPNTASYPPQGA 518
N N G+ +G QG + Q QQ G+ G++ +P S PP
Sbjct: 205 NGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQNGF-RGKRQAPPAGSPPPP-- 261
Query: 519 TQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
P G PP + G GS PP + AG P + PP G P AGG P
Sbjct: 262 -PPPKGSPPLA--GSGSPPPPPA--AG-SPPPPRTGSPPPPPTGSPPPPP--AGGSPPPP 313
Query: 579 YSHSQPPPSS-YAQPDSGSQRAPPSNYGAA 607
+ S PPP P +GS PP G +
Sbjct: 314 RAGSPPPPPPPRGSPPTGS--LPPPQAGGS 341
Score = 142 (55.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 59/209 (28%), Positives = 84/209 (40%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYH-APQSGYGQAAPYDQQQGYNSAA-GYGNVNNT 467
G+S S P G+ G+ + +GG+ APQ G + Q G++ A G+GN
Sbjct: 75 GFSGS-PQQGGFG--GRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFSGAPQGFGNNQQG 131
Query: 468 SQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYP--PQGA---TQPS 522
G+ + G G T +PPP + QG+G Q + PQG Q
Sbjct: 132 GFGGNQGNQGGFGGRTGSPPPFGGFSG-APQGFGGNQGGFGGQTGFSEAPQGFGNNQQGG 190
Query: 523 YGVPPTSQSGYGSQVPPQSGY-----AGYGMPQAQKPLA---NPPAYGQTQQSPGSAGGY 574
+G +Q G+G Q Q+G G+G Q +GQ QQ+ G
Sbjct: 191 FGGNQGNQGGFGGQ-NGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGK 249
Query: 575 GQ--PGYSHSQPPPSSYAQPDSGSQRAPP 601
Q P S PPP + P +GS PP
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPP 278
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 50/176 (28%), Positives = 68/176 (38%)
Query: 432 SYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQS 491
++GG QSG+G + + QG S G+G N G +P G G T +PPP
Sbjct: 42 NFGGQQQEQSGFGSQSGFGNNQG--SQGGFGG-NQGGFSG-SPQQGGFGGRTGSPPPFGG 97
Query: 492 SAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGY-GMPQ 550
+ QG+G Q + GA Q G Q G+G Q G+ G G P
Sbjct: 98 FSG-APQGFGGNQGGFGGQTGF--SGAPQ---GFGNNQQGGFGGNQGNQGGFGGRTGSPP 151
Query: 551 AQKPLANPPAYGQTQQSPGSAGGYG-QPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
P G Q G+ GG+G Q G+S + P + G N G
Sbjct: 152 ---PFGG--FSGAPQGFGGNQGGFGGQTGFSEA---PQGFGNNQQGGFGGNQGNQG 199
Score = 132 (51.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 57/207 (27%), Positives = 77/207 (37%)
Query: 410 GYSYSQPPASGYNQQGQGY------AQDSYGGYH-APQSGYGQAAPYDQQQGYNSAA-GY 461
G+ +Q G NQ QG + +GG+ APQ G + Q G++ A G+
Sbjct: 124 GFGNNQQGGFGGNQGNQGGFGGRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFSEAPQGF 183
Query: 462 GNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQP 521
GN Q G + G QG GQ G TG N QG T
Sbjct: 184 GN---NQQGGFGGNQGNQGGF---------GGQNGQNGQNTGN----NGGFGGNQGVTAS 227
Query: 522 SYGVPPTSQSGYGSQVPPQSGYAGYGM-------PQAQKPLANPPAYGQTQQSPGSAGGY 574
+G Q G+G Q Q+G+ G P P +PP G P A G
Sbjct: 228 GFG---GQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS 284
Query: 575 GQPGYSHSQPPPSSYAQPDSGSQRAPP 601
P + S PPP + + P + +PP
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Score = 124 (48.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 61/204 (29%), Positives = 80/204 (39%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYG-QAAPYDQQQGYNSAA-GYGNVNNT 467
G+S P G NQQG +GG Q G+G + G++ A G+G N
Sbjct: 117 GFS-GAPQGFGNNQQG------GFGGNQGNQGGFGGRTGSPPPFGGFSGAPQGFGG-NQG 168
Query: 468 SQEGHTP-SYGAQGDSTQAPPPVQSSAAMGQQGYG--TGQ--QPSPNTASYPP-QGATQP 521
G T S QG + Q G+G GQ Q + N + QG T
Sbjct: 169 GFGGQTGFSEAPQGFGNNQQGGFGGNQG-NQGGFGGQNGQNGQNTGNNGGFGGNQGVTAS 227
Query: 522 SYGVPPTSQSGYGSQVPPQSGYAGYGM-PQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS 580
+G Q G+G Q Q+G+ G P A P PP G + GS G P +
Sbjct: 228 GFG---GQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLA-GS-GSPPPPPAA 282
Query: 581 HSQPPP--SSYAQPDSGSQRAPPS 602
S PPP S P +GS PP+
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPA 306
Score = 114 (45.2 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 55/191 (28%), Positives = 68/191 (35%)
Query: 426 QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNT-SQEGHTPSYGAQ---GD 481
QG +GG Q G+GQ QQQ N G S P G+ G
Sbjct: 222 QGVTASGFGGQ---QQGFGQ-----QQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGS 273
Query: 482 STQAPPPVQSSAAMGQQGYG----TGQQPSPNTA-SYPPQGATQPSYGVPPTSQSGYGSQ 536
+ PPP S + G TG P P S PP A P PP GS
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 333
Query: 537 VPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP--GYSHSQPPPSSYAQPDS 594
PPQ+G G P + PP Q +Q+P + G P G + PP P
Sbjct: 334 PPPQAG----GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRG--GPGK 387
Query: 595 GSQRAPPSNYG 605
S+ + S G
Sbjct: 388 SSEESSESREG 398
Score = 113 (44.8 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 53/205 (25%), Positives = 72/205 (35%)
Query: 420 GYNQQGQGYAQDSYGGYHAPQSG--YGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS-- 475
G QQG G Q + G+ + G P +G AG G+ G P
Sbjct: 230 GGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPR 289
Query: 476 YGAQGDS-TQAPPPVQSSAAMGQQGYGTGQQP-----SPNTASYPPQ--GATQPSYGV-- 525
G+ T +PPP + + G+ P SP T S PP G + P G
Sbjct: 290 TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS 349
Query: 526 --PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP-GYSHS 582
PP Q + P +G G P +P P + S G G P G
Sbjct: 350 PPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRG 409
Query: 583 QPPPSSYAQPDS-----GSQRAPPS 602
P SS +S G +R+PP+
Sbjct: 410 GPRKSSEESSESREEPRGPRRSPPT 434
Score = 91 (37.1 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 42/146 (28%), Positives = 59/146 (40%)
Query: 462 GNVNNTSQEGHTPSYGAQGDSTQAPP--PVQSSAAMGQQGYGTGQQPSPNTASYPPQGAT 519
G +S+E G +G P P +SS ++ + ++P S PP G+
Sbjct: 383 GGPGKSSEESSESREGPRGGPRGGPRGGPRKSS----EESSESREEPRGPRRS-PPTGS- 436
Query: 520 QPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQK---PLANPPAYGQTQQSPGSAGGYGQ 576
P G PPT + GS PP +G G+P QK P P T P G
Sbjct: 437 -PPTGSPPTGRPPRGS--PP-TGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGG 492
Query: 577 PGYSHSQPPPSSYAQPDSGSQRAPPS 602
PG S S S + G +R+PP+
Sbjct: 493 PGKSES----SESREGPRGPRRSPPT 514
Score = 71 (30.1 bits), Expect = 8.8e-10, Sum P(3) = 8.8e-10
Identities = 24/72 (33%), Positives = 34/72 (47%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQ--PGAYPGQTPQYNMSQPPYGGY 357
P GG +Q G+ + S G + QQ G+G Q G + G+T S PP+GG+
Sbjct: 102 PQGFGG-NQGGFGGQTGFSGAPQGFGNNQQGGFGGNQGNQGGFGGRTG----SPPPFGGF 156
Query: 358 PSQPTPGGYPGN 369
P G+ GN
Sbjct: 157 SGAPQ--GFGGN 166
Score = 67 (28.6 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 304 GGYSQQ----GYQARPPTSWGTPGAPSMQQPGY-GYVQPGAYPGQTPQYNMSQPPYGGYP 358
GG Q+ G Q+ + G+ G Q G+ G Q G + G+T S PP+GG+
Sbjct: 44 GGQQQEQSGFGSQSGFGNNQGSQGGFGGNQGGFSGSPQQGGFGGRTG----SPPPFGGFS 99
Query: 359 SQPTPGGYPGN 369
P G+ GN
Sbjct: 100 GAPQ--GFGGN 108
Score = 43 (20.2 bits), Expect = 8.8e-10, Sum P(3) = 8.8e-10
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 88 ENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGY 124
+ GGF GFS P + P +GG+
Sbjct: 63 QGSQGGFGGNQGGFSGSPQQ-GGFGGRTGSPPPFGGF 98
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/37 (29%), Positives = 13/37 (35%)
Query: 92 GGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMG 128
GGF A +GF S P +G Q G
Sbjct: 96 GGFSGAPQGFGGNQGGFGGQTGFSGAPQGFGNNQQGG 132
>UNIPROTKB|F1NCS2 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS50102 PROSITE:PS50199
SMART:SM00360 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00530000063105 EMBL:AADN02050467 EMBL:AADN02050468
EMBL:AADN02050469 IPI:IPI00590722 Ensembl:ENSGALT00000038026
Uniprot:F1NCS2
Length = 658
Score = 175 (66.7 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 74/211 (35%), Positives = 89/211 (42%)
Query: 421 YNQQGQGYAQDSYGGYHAPQ--SGYGQAAP-YDQQQ----GYNSAAGYGNVNNTSQEGHT 473
Y+ Q AQ Y Y APQ GY Q Y QQ G + A Y T+ G T
Sbjct: 6 YSTYSQAAAQQGYSAY-APQPAQGYAQTTQTYGQQSYGTYGQPTDASYTQPQTTATYGQT 64
Query: 474 P---SYGAQGDSTQAP--PPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
SYG AP PP S QGYGT + +TA+ TQ SY P
Sbjct: 65 AYATSYGQPPTGYTAPTAPPAYSQPV---QGYGTAAYDT-STATVT---TTQASYAAP-- 115
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAY------GQTQQSPGSAGGYGQP--GY- 579
S YG+Q P Y YG Q P A PP +T Q P S GY QP GY
Sbjct: 116 --SAYGTQ--P--AYPAYGQ---QPPAAVPPRPQDGSKPAETSQPPSSTTGYNQPSLGYG 166
Query: 580 --SHSQPP-PSSYA-QPDSGSQRAPPSNYGA 606
++S P P+SY QP + PP++Y +
Sbjct: 167 QSNYSYPQVPASYPMQPVTAPPSYPPTSYSS 197
Score = 174 (66.3 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 67/202 (33%), Positives = 82/202 (40%)
Query: 410 GYSY-SQPPASGYNQQGQGYAQDSYGGYHAP----QSGYGQAAPYDQQQGYNSAAGYGNV 464
GY+ + PPA Y+Q QGY +Y A Q+ Y + Y Q Y + YG
Sbjct: 76 GYTAPTAPPA--YSQPVQGYGTAAYDTSTATVTTTQASYAAPSAYGTQPAYPA---YGQQ 130
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNT-ASYPPQGATQP-S 522
+ P G++ T PP + GYG P ASYP Q T P S
Sbjct: 131 PPAAVPPR-PQDGSKPAETSQPPSSTTGYNQPSLGYGQSNYSYPQVPASYPMQPVTAPPS 189
Query: 523 YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHS 582
Y PPTS Y S P S Y Q + YGQ Q + YGQ
Sbjct: 190 Y--PPTS---YSSTQP--SSYD-------QSTYSQQSTYGQ-QNTYSQQTSYGQQSSYAQ 234
Query: 583 QPPPSSYAQPDSGSQRAPPSNY 604
QPPP+SY P +GS PPS Y
Sbjct: 235 QPPPTSYP-PQTGSYSQPPSQY 255
Score = 169 (64.5 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 72/215 (33%), Positives = 86/215 (40%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
GYS Y+ PA GY Q Q Y Q SYG Y P A Y Q Q + A YG +
Sbjct: 17 GYSAYAPQPAQGYAQTTQTYGQQSYGTYGQPTD-----ASYTQPQ---TTATYGQTAYAT 68
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQ-QPSPNTASYPPQGATQPS-YGVP 526
G P+ G + PP S QGYGT S T + PS YG
Sbjct: 69 SYGQPPT----GYTAPTAPPAYSQPV---QGYGTAAYDTSTATVTTTQASYAAPSAYGTQ 121
Query: 527 PTSQSGYGSQVP------PQSGY--AGYGMPQAQKPLANPPA--YGQTQQS-PGSAGGYG 575
P + YG Q P PQ G A P + N P+ YGQ+ S P Y
Sbjct: 122 P-AYPAYGQQPPAAVPPRPQDGSKPAETSQPPSSTTGYNQPSLGYGQSNYSYPQVPASYP 180
Query: 576 -QPGYSHSQPPPSSYA--QPDSGSQR--APPSNYG 605
QP + PP+SY+ QP S Q + S YG
Sbjct: 181 MQPVTAPPSYPPTSYSSTQPSSYDQSTYSQQSTYG 215
Score = 163 (62.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 71/217 (32%), Positives = 86/217 (39%)
Query: 412 SYSQPPASGYNQ-QGQG-YAQDSYG-GYHAPQSGY-GQAAP--YDQQ-QGYNSAA---GY 461
+Y QP + Y Q Q Y Q +Y Y P +GY AP Y Q QGY +AA
Sbjct: 43 TYGQPTDASYTQPQTTATYGQTAYATSYGQPPTGYTAPTAPPAYSQPVQGYGTAAYDTST 102
Query: 462 GNVNNTSQEGHTPS-YGAQ----GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQ 516
V T PS YG Q Q P V G + T Q PS T
Sbjct: 103 ATVTTTQASYAAPSAYGTQPAYPAYGQQPPAAVPPRPQDGSKPAETSQPPSSTT------ 156
Query: 517 GATQPSYGVPPTSQSGYG-SQVPPQSGYAGYGMPQAQKPLANPP-AYGQTQQSPGSAGGY 574
G QPS G QS Y QVP A Y M P + PP +Y TQ S Y
Sbjct: 157 GYNQPSLGY---GQSNYSYPQVP-----ASYPMQPVTAPPSYPPTSYSSTQPSSYDQSTY 208
Query: 575 GQP---GYSHSQPPPSSYAQPDSGSQRAPPSNYGAAT 608
Q G ++ +SY Q S +Q+ PP++Y T
Sbjct: 209 SQQSTYGQQNTYSQQTSYGQQSSYAQQPPPTSYPPQT 245
Score = 128 (50.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 54/186 (29%), Positives = 72/186 (38%)
Query: 411 YSYSQPPASGYNQQG----QGYAQDSYGGYHAP---QSGYGQAAPYDQQQGYNSAAGYGN 463
YSY Q PAS Y Q Y SY QS Y Q + Y QQ Y+ YG
Sbjct: 170 YSYPQVPAS-YPMQPVTAPPSYPPTSYSSTQPSSYDQSTYSQQSTYGQQNTYSQQTSYGQ 228
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPV--QSSAAMGQQGYGTGQQPSP-NTASYPPQGATQ 520
++ +Q+ SY Q S PP Q S++ GQQ PS N G +
Sbjct: 229 QSSYAQQPPPTSYPPQTGSYSQPPSQYSQQSSSYGQQSSFRQDHPSSMNVYGQESGGFSG 288
Query: 521 PSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS 580
P + SG ++ + GY GM + + G S G GG+ +PG
Sbjct: 289 PGEN---RNMSGPDNRGRGRGGYERGGMSRGGRG-GGRGGMG----SAGERGGFNKPG-G 339
Query: 581 HSQPPP 586
H + P
Sbjct: 340 HMEEGP 345
Score = 73 (30.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 22/72 (30%), Positives = 27/72 (37%)
Query: 300 PAMAGGYSQQGYQA---RPPTSWGTPGAP-SMQQPGYGYVQPGAYPGQTPQYNMSQPPYG 355
P Y Q Y +PPT + P AP + QP GY AY T +Q Y
Sbjct: 55 PQTTATYGQTAYATSYGQPPTGYTAPTAPPAYSQPVQGY-GTAAYDTSTATVTTTQASYA 113
Query: 356 GYPSQPTPGGYP 367
+ T YP
Sbjct: 114 APSAYGTQPAYP 125
Score = 56 (24.8 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 26/73 (35%), Positives = 28/73 (38%)
Query: 300 PAMAGGYSQ--QGY-QARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNM--SQPPY 354
P YSQ QGY A TS T + Q Y P AY G P Y QPP
Sbjct: 80 PTAPPAYSQPVQGYGTAAYDTSTAT--VTTTQA---SYAAPSAY-GTQPAYPAYGQQPP- 132
Query: 355 GGYPSQPTPGGYP 367
P +P G P
Sbjct: 133 AAVPPRPQDGSKP 145
Score = 47 (21.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 4 EPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYN 48
+P +S P QT ++ + PTG++AP AP +Y+
Sbjct: 46 QPTDASYTQPQTTATYGQTAYATSYGQPPTGYTAP---TAPPAYS 87
Score = 46 (21.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 18/60 (30%), Positives = 19/60 (31%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGY 366
+QQGY A P QP GY Q GQ QP Y T Y
Sbjct: 14 AQQGYSAYAP------------QPAQGYAQTTQTYGQQSYGTYGQPTDASYTQPQTTATY 61
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 8 SSDGT-PSKRKYEDQTTPPSAAARRPTGFSAP----DPAVAPTSYN 48
S+ GT P+ Y Q PP+A RP S P P + T YN
Sbjct: 116 SAYGTQPAYPAYGQQ--PPAAVPPRPQDGSKPAETSQPPSSTTGYN 159
>MGI|MGI:104725 [details] [associations]
symbol:Atn1 "atrophin 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0003714
"transcription corepressor activity" evidence=ISO;IGI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IC;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008432 "JUN kinase binding" evidence=ISO]
[GO:0009404 "toxin metabolic process" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=ISO] [GO:0016477 "cell migration"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030011 "maintenance of cell polarity"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0031252
"cell leading edge" evidence=ISO] [GO:0045664 "regulation of neuron
differentiation" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0050827 "toxin receptor binding"
evidence=IDA] [GO:0051402 "neuron apoptotic process" evidence=ISO]
MGI:MGI:104725 GO:GO:0005634 GO:GO:0005737 GO:GO:0048471
GO:GO:0003714 GO:GO:0045664 GO:GO:0031252 GO:GO:0016477
GO:GO:0030054 GO:GO:0051402 GO:GO:0006351 GO:GO:0000122
EMBL:CH466523 GO:GO:0016363 GO:GO:0009404 CTD:1822 eggNOG:NOG331121
HOVERGEN:HBG075369 KO:K05626 OMA:ATFPHVT OrthoDB:EOG4RFKT4
ChiTaRS:ATN1 GO:GO:0030011 InterPro:IPR017993 InterPro:IPR002951
Pfam:PF03154 PRINTS:PR01222 EMBL:D87744 EMBL:AC002397 EMBL:BC050920
EMBL:BC053051 IPI:IPI00858102 RefSeq:NP_031907.2 UniGene:Mm.333380
ProteinModelPortal:O35126 STRING:O35126 PhosphoSite:O35126
PRIDE:O35126 Ensembl:ENSMUST00000088357 Ensembl:ENSMUST00000129411
GeneID:13498 KEGG:mmu:13498 UCSC:uc009drq.1
GeneTree:ENSGT00580000081398 HOGENOM:HOG000231091 InParanoid:O35126
NextBio:284033 Bgee:O35126 Genevestigator:O35126 GO:GO:0050827
Uniprot:O35126
Length = 1175
Score = 144 (55.7 bits), Expect = 9.2e-10, Sum P(3) = 9.2e-10
Identities = 59/206 (28%), Positives = 80/206 (38%)
Query: 410 GYSYSQPPA-SGYNQQGQGYAQDSYGGYHAPQSG-YG---QAAPYDQQQGYNSAAGYGNV 464
G S + P A + ++ Q Q Q +G P G Y +++ YN + G++
Sbjct: 466 GQSTAHPAAPTHHHHQQQPQQQHHHGNSGPPPPGAYPHPLESSNSHHAHPYNMSPSLGSL 525
Query: 465 NNTSQ-EGHTPSYGAQGDSTQA-P--PPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ 520
H P Q QA P PPV SS + G + P++ S PQGA+
Sbjct: 526 RPYPPGPAHLPPPHGQVSYNQAGPNGPPVSSSNSSGSSSQASYSCSHPSS-SQGPQGASY 584
Query: 521 PSYGVPP-TSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
P VPP T+ S S V + G A P PP Y + SPGS PGY
Sbjct: 585 PFPPVPPVTTSSATLSTVIATVASSPAGYKTASPP--GPPQYSKRAPSPGSYKTATPPGY 642
Query: 580 SHSQPPPSSYAQPDSGSQRAPPSNYG 605
PP P +PP+ G
Sbjct: 643 KPGSPPSFRTGTPPGYRGTSPPAGPG 668
Score = 121 (47.7 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 54/175 (30%), Positives = 70/175 (40%)
Query: 434 GGYHAP----QSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPP-- 487
G H P Q Y QA P ++++G + + S + S G QG S PP
Sbjct: 531 GPAHLPPPHGQVSYNQAGPNGPPVSSSNSSGSSSQASYSCSHPSSSQGPQGASYPFPPVP 590
Query: 488 PVQSSAAMGQQGYGT-GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGY 546
PV +S+A T P+ + PP G Q S P S Y + PP GY
Sbjct: 591 PVTTSSATLSTVIATVASSPAGYKTASPP-GPPQYSKRAP--SPGSYKTATPP--GYKP- 644
Query: 547 GMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPP 601
G P + + PP Y T SP + G +PG P P A P S S PP
Sbjct: 645 GSPPSFRT-GTPPGYRGT--SPPAGPGTFKPGSPTVGPGPLPPAGPSSLSSLPPP 696
Score = 108 (43.1 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 42/152 (27%), Positives = 51/152 (33%)
Query: 453 QGYNSAAGYGNV--NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNT 510
QG YG + NN + G P G Q + A P QQ + G P
Sbjct: 439 QGPPPPPPYGRLLANNNTHPGPFPPTGGQSTAHPAAPTHHHHQQQPQQQHHHGNSGPPPP 498
Query: 511 ASYP-PQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPG 569
+YP P ++ + P GS P G A P Q G S
Sbjct: 499 GAYPHPLESSNSHHAHPYNMSPSLGSLRPYPPGPAHLPPPHGQVSYNQAGPNGPPVSSSN 558
Query: 570 SAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPP 601
S+G Q YS S P SS P S PP
Sbjct: 559 SSGSSSQASYSCSHP--SSSQGPQGASYPFPP 588
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 44/170 (25%), Positives = 59/170 (34%)
Query: 438 APQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQ 497
A S G Y +SAA + +++S + S PPP S +
Sbjct: 364 ASSSAPGPPMRYPYSSSSSSAAASSSSSSSSASQYPASQALPSYPHSFPPPTSMSVS--- 420
Query: 498 QGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLAN 557
Q P S P Q S G PP YG + + + G P + A+
Sbjct: 421 -----NQPPKYTQPSLPSQAVW--SQGPPPPPP--YGRLLANNNTHPGPFPPTGGQSTAH 471
Query: 558 P--PAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQP--DSGSQRAPPSN 603
P P + QQ P +G G PPP +Y P S S A P N
Sbjct: 472 PAAPTHHHHQQQPQQQHHHGNSG----PPPPGAYPHPLESSNSHHAHPYN 517
Score = 96 (38.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 45/142 (31%), Positives = 57/142 (40%)
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY 523
+NN S P GAQ P P AMGQ G +G P P P A P +
Sbjct: 312 LNNASAS--PPGMGAQPIPGHLPSP----HAMGQ-GM-SGLPPGPEKG---PTLAPSP-H 359
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
+PP S S G PP Y Y + ++ + Q P S P Y HS
Sbjct: 360 PLPPASSSAPG---PPMR-YP-YSSSSSSAAASSSSSSSSASQYPASQA---LPSYPHSF 411
Query: 584 PPPSSYA---QPDSGSQRAPPS 602
PPP+S + QP +Q + PS
Sbjct: 412 PPPTSMSVSNQPPKYTQPSLPS 433
Score = 81 (33.6 bits), Expect = 9.2e-10, Sum P(3) = 9.2e-10
Identities = 34/118 (28%), Positives = 49/118 (41%)
Query: 24 PPSAAARRP-TGFSAPDPAVAPTSYNS-VPPPADEFQDFQAAKRRAEQIAARLC--NSVS 79
PP + R+P +GF P P+V PT Y++ + PP FQ A +L N+
Sbjct: 171 PPDSTPRQPESGFE-PHPSVPPTGYHAPMEPPTSRL--FQGPPPGAPPTHPQLYPGNASG 227
Query: 80 AEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSA-IPVSYGGYQSMGTSKKIEIP 136
P + GG ++ G PS K P P+ IP+S G +K P
Sbjct: 228 GVLSGPPM-GPKGGAAASSVG---APSGGKQHPPPTTPIPISSSGASGAPPAKPPSAP 281
Score = 60 (26.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/48 (39%), Positives = 20/48 (41%)
Query: 310 GYQA--RPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG 355
GY A PPTS G P PG P YPG +S PP G
Sbjct: 193 GYHAPMEPPTSRLFQGPP----PGAPPTHPQLYPGNASGGVLSGPPMG 236
Score = 56 (24.8 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 19/51 (37%), Positives = 23/51 (45%)
Query: 8 SSDGTPSKRK-YEDQTTPPSAAARRPTGFSAPDPAVAPT---SYNSVPPPA 54
SS G PS K + TTP ++ +G P AP S S PPPA
Sbjct: 244 SSVGAPSGGKQHPPPTTPIPISSSGASGAPPAKPPSAPVGGGSLPSAPPPA 294
Score = 54 (24.1 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 28/98 (28%), Positives = 38/98 (38%)
Query: 24 PPSAAARRPTGFSAPDPAVAP-TSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSVSAEA 82
PPSA + SAP PA P + N PPPA + A + A+ +
Sbjct: 277 PPSAPVGGGSLPSAPPPASFPHVTPNLPPPPA--LRPLNNASASPPGMGAQ---PIPGHL 331
Query: 83 KRPR-VENGSGGFDSA-DKGFSSPPSDLKSIPAPSAIP 118
P + G G +KG + PS PA S+ P
Sbjct: 332 PSPHAMGQGMSGLPPGPEKGPTLAPSPHPLPPASSSAP 369
Score = 49 (22.3 bits), Expect = 9.2e-10, Sum P(3) = 9.2e-10
Identities = 20/67 (29%), Positives = 27/67 (40%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGA---PSMQQ-PGYGYVQPGAYPGQTPQYNMSQPPYG 355
P M YS A +S + A P+ Q P Y P ++P T +QPP
Sbjct: 371 PPMRYPYSSSSSSAAASSSSSSSSASQYPASQALPSY----PHSFPPPTSMSVSNQPPKY 426
Query: 356 GYPSQPT 362
PS P+
Sbjct: 427 TQPSLPS 433
Score = 48 (22.0 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 24/68 (35%), Positives = 28/68 (41%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGG-YPS 359
A + G G Q PPT TP P + G GA P + P S P GG PS
Sbjct: 243 ASSVGAPSGGKQHPPPT---TP-IP-ISSSGAS----GAPPAKPP----SAPVGGGSLPS 289
Query: 360 QPTPGGYP 367
P P +P
Sbjct: 290 APPPASFP 297
Score = 47 (21.6 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 20/62 (32%), Positives = 26/62 (41%)
Query: 312 QARP--PTSWGTPGAPSMQQPGYGYVQPGAYPGQT--PQYNMSQPPYGGYPSQPT--PGG 365
QA P P S+ P + S+ Y QP + P Q Q PPYG + PG
Sbjct: 402 QALPSYPHSFPPPTSMSVSNQPPKYTQP-SLPSQAVWSQGPPPPPPYGRLLANNNTHPGP 460
Query: 366 YP 367
+P
Sbjct: 461 FP 462
Score = 47 (21.6 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 315 PPTSWGTPGAPSMQQPG-YGYV--QPGAYPGQTPQYNMSQPP----YGGYPSQPTPGGYP 367
PP +G A + PG + Q A+P ++ Q P + G P PG YP
Sbjct: 443 PPPPYGRLLANNNTHPGPFPPTGGQSTAHPAAPTHHHHQQQPQQQHHHGNSGPPPPGAYP 502
Score = 47 (21.6 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 22 TTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
+ PP A+ T P PA+ P + S PP
Sbjct: 289 SAPPPASFPHVTPNLPPPPALRPLNNASASPP 320
Score = 43 (20.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 14/51 (27%), Positives = 19/51 (37%)
Query: 5 PQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSA-PDPAVAPTSYNSVPPPA 54
P+Y+ PS+ + PP R + P P PT S PA
Sbjct: 424 PKYTQPSLPSQAVWSQGPPPPPPYGRLLANNNTHPGP-FPPTGGQSTAHPA 473
Score = 42 (19.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 24/94 (25%), Positives = 38/94 (40%)
Query: 274 IDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYG 333
+DG S + + ++ +NR +P++ YS + +S G P+ +P
Sbjct: 108 LDGRSINDDGSSD-PRDIDQDNRSTSPSI---YSPGSVENDSDSSSGLSQGPA--RP--- 158
Query: 334 YVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYP 367
Y P +P P S PP P QP G P
Sbjct: 159 YHPPPLFP---P----SPPPPDSTPRQPESGFEP 185
Score = 40 (19.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 23/109 (21%), Positives = 35/109 (32%)
Query: 13 PSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAA 72
P+ R + + P +P P P + +PP ++ + ++
Sbjct: 307 PALRPLNNASASPPGMGAQPIPGHLPSPHAMGQGMSGLPPGPEKGPTLAPSPHPLPPASS 366
Query: 73 RLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSY 121
SA R S SA SS S PA A+P SY
Sbjct: 367 ------SAPGPPMRYPYSSSS-SSAAASSSSSSSSASQYPASQALP-SY 407
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 82 AKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAI 117
AK P G G SA +S P ++P P A+
Sbjct: 275 AKPPSAPVGGGSLPSAPPP-ASFPHVTPNLPPPPAL 309
>ZFIN|ZDB-GENE-040426-2122 [details] [associations]
symbol:zgc:65870 "zgc:65870" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-040426-2122
GO:GO:0003723 GeneTree:ENSGT00550000074311 EMBL:CU856621
EMBL:AL954840 EMBL:CABZ01011786 EMBL:CABZ01011787 EMBL:CABZ01011788
EMBL:CABZ01011789 EMBL:CABZ01011790 EMBL:CU462880 EMBL:CU469461
IPI:IPI01016643 Ensembl:ENSDART00000137945 Bgee:F1Q8M8
Uniprot:F1Q8M8
Length = 464
Score = 177 (67.4 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 52/156 (33%), Positives = 81/156 (51%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GET+K ++ +S A+I ++ + P R + + G E + +A +I L
Sbjct: 38 VGSIIGKKGETVKRIREESSARINISEGS-----CPERIITITGATECVFRAFTMITIKL 92
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E + +VA + IP ++ G +IGKGG IK ++ +TGA++QV
Sbjct: 93 ---EEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQVAGD 149
Query: 260 HLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISEN 295
LP STER V I G+ + I +L+ VI E+
Sbjct: 150 LLP---NSTERGVTISGSQDAIIQCVKLICTVILES 182
Score = 39 (18.8 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 483 TQAPPPVQSSAA 494
TQ PP SSAA
Sbjct: 370 TQTAPPASSSAA 381
>UNIPROTKB|F1NDA5 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00530000063105
EMBL:AADN02050467 EMBL:AADN02050468 EMBL:AADN02050469
IPI:IPI00820143 Ensembl:ENSGALT00000013237 OMA:PQTTATY
Uniprot:F1NDA5
Length = 690
Score = 175 (66.7 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 74/211 (35%), Positives = 89/211 (42%)
Query: 421 YNQQGQGYAQDSYGGYHAPQ--SGYGQAAP-YDQQQ----GYNSAAGYGNVNNTSQEGHT 473
Y+ Q AQ Y Y APQ GY Q Y QQ G + A Y T+ G T
Sbjct: 6 YSTYSQAAAQQGYSAY-APQPAQGYAQTTQTYGQQSYGTYGQPTDASYTQPQTTATYGQT 64
Query: 474 P---SYGAQGDSTQAP--PPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
SYG AP PP S QGYGT + +TA+ TQ SY P
Sbjct: 65 AYATSYGQPPTGYTAPTAPPAYSQPV---QGYGTAAYDT-STATVT---TTQASYAAP-- 115
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAY------GQTQQSPGSAGGYGQP--GY- 579
S YG+Q P Y YG Q P A PP +T Q P S GY QP GY
Sbjct: 116 --SAYGTQ--P--AYPAYGQ---QPPAAVPPRPQDGSKPAETSQPPSSTTGYNQPSLGYG 166
Query: 580 --SHSQPP-PSSYA-QPDSGSQRAPPSNYGA 606
++S P P+SY QP + PP++Y +
Sbjct: 167 QSNYSYPQVPASYPMQPVTAPPSYPPTSYSS 197
Score = 174 (66.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 67/202 (33%), Positives = 82/202 (40%)
Query: 410 GYSY-SQPPASGYNQQGQGYAQDSYGGYHAP----QSGYGQAAPYDQQQGYNSAAGYGNV 464
GY+ + PPA Y+Q QGY +Y A Q+ Y + Y Q Y + YG
Sbjct: 76 GYTAPTAPPA--YSQPVQGYGTAAYDTSTATVTTTQASYAAPSAYGTQPAYPA---YGQQ 130
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNT-ASYPPQGATQP-S 522
+ P G++ T PP + GYG P ASYP Q T P S
Sbjct: 131 PPAAVPPR-PQDGSKPAETSQPPSSTTGYNQPSLGYGQSNYSYPQVPASYPMQPVTAPPS 189
Query: 523 YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHS 582
Y PPTS Y S P S Y Q + YGQ Q + YGQ
Sbjct: 190 Y--PPTS---YSSTQP--SSYD-------QSTYSQQSTYGQ-QNTYSQQTSYGQQSSYAQ 234
Query: 583 QPPPSSYAQPDSGSQRAPPSNY 604
QPPP+SY P +GS PPS Y
Sbjct: 235 QPPPTSYP-PQTGSYSQPPSQY 255
Score = 169 (64.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 72/215 (33%), Positives = 86/215 (40%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
GYS Y+ PA GY Q Q Y Q SYG Y P A Y Q Q + A YG +
Sbjct: 17 GYSAYAPQPAQGYAQTTQTYGQQSYGTYGQPTD-----ASYTQPQ---TTATYGQTAYAT 68
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQ-QPSPNTASYPPQGATQPS-YGVP 526
G P+ G + PP S QGYGT S T + PS YG
Sbjct: 69 SYGQPPT----GYTAPTAPPAYSQPV---QGYGTAAYDTSTATVTTTQASYAAPSAYGTQ 121
Query: 527 PTSQSGYGSQVP------PQSGY--AGYGMPQAQKPLANPPA--YGQTQQS-PGSAGGYG 575
P + YG Q P PQ G A P + N P+ YGQ+ S P Y
Sbjct: 122 P-AYPAYGQQPPAAVPPRPQDGSKPAETSQPPSSTTGYNQPSLGYGQSNYSYPQVPASYP 180
Query: 576 -QPGYSHSQPPPSSYA--QPDSGSQR--APPSNYG 605
QP + PP+SY+ QP S Q + S YG
Sbjct: 181 MQPVTAPPSYPPTSYSSTQPSSYDQSTYSQQSTYG 215
Score = 163 (62.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 71/217 (32%), Positives = 86/217 (39%)
Query: 412 SYSQPPASGYNQ-QGQG-YAQDSYG-GYHAPQSGY-GQAAP--YDQQ-QGYNSAA---GY 461
+Y QP + Y Q Q Y Q +Y Y P +GY AP Y Q QGY +AA
Sbjct: 43 TYGQPTDASYTQPQTTATYGQTAYATSYGQPPTGYTAPTAPPAYSQPVQGYGTAAYDTST 102
Query: 462 GNVNNTSQEGHTPS-YGAQ----GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQ 516
V T PS YG Q Q P V G + T Q PS T
Sbjct: 103 ATVTTTQASYAAPSAYGTQPAYPAYGQQPPAAVPPRPQDGSKPAETSQPPSSTT------ 156
Query: 517 GATQPSYGVPPTSQSGYG-SQVPPQSGYAGYGMPQAQKPLANPP-AYGQTQQSPGSAGGY 574
G QPS G QS Y QVP A Y M P + PP +Y TQ S Y
Sbjct: 157 GYNQPSLGY---GQSNYSYPQVP-----ASYPMQPVTAPPSYPPTSYSSTQPSSYDQSTY 208
Query: 575 GQP---GYSHSQPPPSSYAQPDSGSQRAPPSNYGAAT 608
Q G ++ +SY Q S +Q+ PP++Y T
Sbjct: 209 SQQSTYGQQNTYSQQTSYGQQSSYAQQPPPTSYPPQT 245
Score = 128 (50.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 54/186 (29%), Positives = 72/186 (38%)
Query: 411 YSYSQPPASGYNQQG----QGYAQDSYGGYHAP---QSGYGQAAPYDQQQGYNSAAGYGN 463
YSY Q PAS Y Q Y SY QS Y Q + Y QQ Y+ YG
Sbjct: 170 YSYPQVPAS-YPMQPVTAPPSYPPTSYSSTQPSSYDQSTYSQQSTYGQQNTYSQQTSYGQ 228
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPV--QSSAAMGQQGYGTGQQPSP-NTASYPPQGATQ 520
++ +Q+ SY Q S PP Q S++ GQQ PS N G +
Sbjct: 229 QSSYAQQPPPTSYPPQTGSYSQPPSQYSQQSSSYGQQSSFRQDHPSSMNVYGQESGGFSG 288
Query: 521 PSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS 580
P + SG ++ + GY GM + + G S G GG+ +PG
Sbjct: 289 PGEN---RNMSGPDNRGRGRGGYERGGMSRGGRG-GGRGGMG----SAGERGGFNKPG-G 339
Query: 581 HSQPPP 586
H + P
Sbjct: 340 HMEEGP 345
Score = 73 (30.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 22/72 (30%), Positives = 27/72 (37%)
Query: 300 PAMAGGYSQQGYQA---RPPTSWGTPGAP-SMQQPGYGYVQPGAYPGQTPQYNMSQPPYG 355
P Y Q Y +PPT + P AP + QP GY AY T +Q Y
Sbjct: 55 PQTTATYGQTAYATSYGQPPTGYTAPTAPPAYSQPVQGY-GTAAYDTSTATVTTTQASYA 113
Query: 356 GYPSQPTPGGYP 367
+ T YP
Sbjct: 114 APSAYGTQPAYP 125
Score = 56 (24.8 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 26/73 (35%), Positives = 28/73 (38%)
Query: 300 PAMAGGYSQ--QGY-QARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNM--SQPPY 354
P YSQ QGY A TS T + Q Y P AY G P Y QPP
Sbjct: 80 PTAPPAYSQPVQGYGTAAYDTSTAT--VTTTQA---SYAAPSAY-GTQPAYPAYGQQPP- 132
Query: 355 GGYPSQPTPGGYP 367
P +P G P
Sbjct: 133 AAVPPRPQDGSKP 145
Score = 47 (21.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 4 EPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYN 48
+P +S P QT ++ + PTG++AP AP +Y+
Sbjct: 46 QPTDASYTQPQTTATYGQTAYATSYGQPPTGYTAP---TAPPAYS 87
Score = 46 (21.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 18/60 (30%), Positives = 19/60 (31%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGY 366
+QQGY A P QP GY Q GQ QP Y T Y
Sbjct: 14 AQQGYSAYAP------------QPAQGYAQTTQTYGQQSYGTYGQPTDASYTQPQTTATY 61
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 8 SSDGT-PSKRKYEDQTTPPSAAARRPTGFSAP----DPAVAPTSYN 48
S+ GT P+ Y Q PP+A RP S P P + T YN
Sbjct: 116 SAYGTQPAYPAYGQQ--PPAAVPPRPQDGSKPAETSQPPSSTTGYN 159
>UNIPROTKB|O14497 [details] [associations]
symbol:ARID1A "AT-rich interactive domain-containing
protein 1A" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0042921 "glucocorticoid receptor signaling pathway"
evidence=IDA] [GO:0048096 "chromatin-mediated maintenance of
transcription" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA;TAS] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0030521 "androgen receptor signaling pathway"
evidence=IDA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=TAS] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IDA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0042921 EMBL:AL034380 GO:GO:0007399 GO:GO:0030521
GO:GO:0003677 EMBL:CH471059 GO:GO:0006357 GO:GO:0006351
GO:GO:0000790 GO:GO:0003713 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 eggNOG:NOG12793 EMBL:AF231056 EMBL:AL512408
EMBL:AF521670 EMBL:AF219114 EMBL:AF265208 EMBL:AB001895
EMBL:AB024075 EMBL:AF268913 EMBL:AK223275 IPI:IPI00642705
IPI:IPI00643722 IPI:IPI00929427 PIR:T00022 RefSeq:NP_006006.3
RefSeq:NP_624361.1 UniGene:Hs.468972 PDB:1RYU PDBsum:1RYU
ProteinModelPortal:O14497 SMR:O14497 DIP:DIP-33016N IntAct:O14497
STRING:O14497 PhosphoSite:O14497 PaxDb:O14497 PRIDE:O14497
Ensembl:ENST00000324856 Ensembl:ENST00000374152
Ensembl:ENST00000457599 GeneID:8289 KEGG:hsa:8289 UCSC:uc001bmt.1
UCSC:uc001bmu.1 UCSC:uc001bmx.1 CTD:8289 GeneCards:GC01P027022
HGNC:HGNC:11110 HPA:CAB016334 HPA:HPA005456 MIM:603024 MIM:614607
neXtProt:NX_O14497 Orphanet:1465 PharmGKB:PA35960
HOVERGEN:HBG058196 InParanoid:O14497 KO:K11653 OMA:GSQYGPQ
OrthoDB:EOG437RD2 PhylomeDB:O14497 ChiTaRS:ARID1A
EvolutionaryTrace:O14497 GenomeRNAi:8289 NextBio:31061
ArrayExpress:O14497 Bgee:O14497 Genevestigator:O14497
GermOnline:ENSG00000117713 GO:GO:0048096 GO:GO:0030520
GO:GO:0006337 GO:GO:0042766 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 Uniprot:O14497
Length = 2285
Score = 155 (59.6 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 70/199 (35%), Positives = 80/199 (40%)
Query: 410 GYSYSQPPASGYNQQG-QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
G SY+Q Y QQG GY Q Y Y Q +P+ QQQ Y S
Sbjct: 444 GLSYTQQ-IPPYGQQGPSGYGQQGQTPY------YNQQSPHPQQQ----QPPYSQ-QPPS 491
Query: 469 QEGHT-PSYGAQGDSTQAPPPVQSSAA-MGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
Q H PSY Q S PP +QSS QQ Q SP A YP Q +T +
Sbjct: 492 QTPHAQPSYQQQPQSQ--PPQLQSSQPPYSQQPSQPPHQQSP--APYPSQQSTTQQH--- 544
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQKP--LANPPAYGQTQQSPGSAGGYGQPGYSHSQP 584
P SQ Y SQ QS Y PQ P L+ AY Q Q Y Q + P
Sbjct: 545 PQSQPPY-SQPQAQSPYQQQ-QPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRF----P 598
Query: 585 PPSSYAQPDSGSQRAP-PS 602
PP +Q GSQ + PS
Sbjct: 599 PPQELSQDSFGSQASSAPS 617
Score = 152 (58.6 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 74/210 (35%), Positives = 81/210 (38%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
YS Q P SG QQG GY YG PQ Y P Q SA G ++ T Q
Sbjct: 401 YSQQQGPPSG-PQQGHGYPGQPYGS-QTPQR-Y----PMTMQGRAQSAMG--GLSYTQQ- 450
Query: 471 GHTPSYGAQGDST-----QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGV 525
P YG QG S Q P Q S QQ QQP T P QP
Sbjct: 451 --IPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQ-SQ 507
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG----YSH 581
PP QS SQ PP S P Q P P TQQ P S Y QP Y
Sbjct: 508 PPQLQS---SQ-PPYSQQPSQP-PHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQ 562
Query: 582 SQP--P-PSSYAQ----PDSGSQRAPPSNY 604
QP P PS+ +Q P SQ++ + Y
Sbjct: 563 QQPQQPAPSTLSQQAAYPQPQSQQSQQTAY 592
Score = 131 (51.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 64/202 (31%), Positives = 75/202 (37%)
Query: 418 ASGYNQQGQGYAQ---DSYGGYHAPQSGYGQ-AAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
ASG QQ +A S GG P + Q ++P DQ G YG N SQ+
Sbjct: 349 ASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQM-GKMRPQPYGGTNPYSQQQGP 407
Query: 474 PSYGAQGDSTQAPP---PVQSSAAMGQQGYGTGQQPSPN-TASYPPQGATQPSYGVPPTS 529
PS QG P M QG + T PP G PS G
Sbjct: 408 PSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPS-GYGQQG 466
Query: 530 QSGY-GSQVP-PQSGYAGYGM-PQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSH--SQP 584
Q+ Y Q P PQ Y P +Q P A P Q Q P QP YS SQP
Sbjct: 467 QTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQS-SQPPYSQQPSQP 525
Query: 585 P----PSSYAQPDSGSQRAPPS 602
P P+ Y S +Q+ P S
Sbjct: 526 PHQQSPAPYPSQQSTTQQHPQS 547
Score = 124 (48.7 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 55/178 (30%), Positives = 70/178 (39%)
Query: 417 PASGYNQQGQG-YAQDSYGGYHAPQSG-YGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTP 474
P+ G G G Y Q+S G Y PQ G YG Y +Q YN+ N + G
Sbjct: 776 PSGGQIHTGMGSYQQNSMGSY-GPQGGQYGPQGGYPRQPNYNALPN-ANYPSAGMAGGIN 833
Query: 475 SYGAQGDSTQAPP-PVQSSAAMGQQGYGT-GQQP-SPNTASYPPQ---GATQPSYGVP-P 527
GA G P P + G+ + + G +P PN A+ PPQ G P G+
Sbjct: 834 PMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRK 893
Query: 528 TSQSGYGSQVPP---QSGYAGY-GMPQAQKPLANPPAYGQTQQS-PGSAGGYGQPGYS 580
T ++ V Q+ GY M Q PP YGQ S G G P YS
Sbjct: 894 TQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPP-YGQGINSMAGMINPQGPP-YS 949
Score = 103 (41.3 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 56/205 (27%), Positives = 72/205 (35%)
Query: 412 SYSQPPASGYNQQGQGYAQDSY-GGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
SY +P Y + D + P G G PY + G G GNV ++
Sbjct: 1225 SY-EPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGD--PYSRAAG----PGLGNVAMGPRQ 1277
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTA-SYPPQGATQPSYGVPPTS 529
H P YG D + P + G +G + P PN S P G PS PP
Sbjct: 1278 -HYP-YGGPYDRVRTEPGI------GPEGNMSTGAPQPNLMPSNPDSGMYSPSR-YPPQQ 1328
Query: 530 QS-------GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA--GGYGQPGYS 580
Q YG+Q Q +G P Q + Y Q QQ+ G YG P
Sbjct: 1329 QQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTM-----YQQQQQNYKRPMDGTYGPPAKR 1383
Query: 581 HS---QPPPSSYAQPDSGSQRAPPS 602
H P S Q Q+ PP+
Sbjct: 1384 HEGEMYSVPYSTGQGQPQQQQLPPA 1408
Score = 102 (41.0 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 58/208 (27%), Positives = 71/208 (34%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNV---NN 466
G YS P ++G QGQ Q P S A P QQ YN YGN
Sbjct: 1386 GEMYSVPYSTG---QGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQ---YGNAYPATA 1439
Query: 467 TSQEGHTPSYGAQG--------DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPP--Q 516
T+ P+ G Q D APP + M Q G Q S A Q
Sbjct: 1440 TAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQ 1499
Query: 517 GATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANP----PAYGQTQQSPGSAG 572
G +Y +G Q P G AN P++G T+Q P
Sbjct: 1500 GRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHG-TRQPPY--- 1555
Query: 573 GYGQPGYSHSQPPPSSYAQPDSGSQRAP 600
G P ++PPPS+Y P S P
Sbjct: 1556 GPSAPVPPMTRPPPSNYQPPPSMQNHIP 1583
Score = 100 (40.3 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 57/198 (28%), Positives = 68/198 (34%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
YS S+ P QQ Q + DSYG + Q G +P+ QQ T +
Sbjct: 1319 YSPSRYPPQQQQQQQQRH--DSYGNQFSTQ-GTPSGSPFPSQQ------------TTMYQ 1363
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQ 530
+Y D T PP + M Y TGQ P PP QP P SQ
Sbjct: 1364 QQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQG-QPQQQQLPP---AQPQ----PASQ 1415
Query: 531 SGYGSQVPPQSGYAGYG--MPQ-AQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPS 587
P Q Y YG P A PA G Q P +G+ S PP
Sbjct: 1416 QQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQ---FGRDRVS---APPG 1469
Query: 588 SYAQPDSGSQRAPPSNYG 605
+ AQ Q PP G
Sbjct: 1470 TNAQ-----QNMPPQMMG 1482
Score = 97 (39.2 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 28/69 (40%), Positives = 32/69 (46%)
Query: 306 YSQQG---YQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP- 361
Y+QQ Q +PP S P QP Y QP + P PQ SQPPY PSQP
Sbjct: 471 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQ-QPQSQP---PQLQSSQPPYSQQPSQPP 526
Query: 362 ---TPGGYP 367
+P YP
Sbjct: 527 HQQSPAPYP 535
Score = 85 (35.0 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 49/180 (27%), Positives = 63/180 (35%)
Query: 439 PQSGYGQAAPYDQQQGYNSAAG-YGNVNNTSQEGHTPSY--GAQGDSTQAPPPVQSSAAM 495
P G +P G +S+ G N + HT + G +G S P PV S A++
Sbjct: 650 PMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPS---PSPVGSPASV 706
Query: 496 GQQGYGT---GQQPSPNTASYPPQGATQ----PSYGVPPTSQS-GYGSQVPPQSGYAGYG 547
Q G P PP G + PS +Q GY + P Y+
Sbjct: 707 AQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSS-- 764
Query: 548 MPQAQKPLA-NPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYGA 606
PQ L+ P+ GQ GS Y Q P Y P G R P NY A
Sbjct: 765 -PQPGSALSPRQPSGGQIHTGMGS---YQQNSMGSYGPQGGQYG-PQGGYPRQP--NYNA 817
Score = 79 (32.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 25/66 (37%), Positives = 27/66 (40%)
Query: 312 QARPPTSWGTPGAPSMQQ-PGYGYVQPGAY--PGQTPQYNMS-------QPPYGGYPSQP 361
Q R ++ G G QQ P YG P Y GQTP YN QPPY P
Sbjct: 435 QGRAQSAMG--GLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQ 492
Query: 362 TPGGYP 367
TP P
Sbjct: 493 TPHAQP 498
Score = 78 (32.5 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 29/84 (34%), Positives = 35/84 (41%)
Query: 301 AMAGGYSQQGYQA-RPPTSWGTPGAPSMQ--QPG-----YGYVQPGAYPGQTPQYNMSQP 352
A +GG Q+ + A P S G G P + QP G ++P Y G P P
Sbjct: 348 AASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGP 407
Query: 353 PYG-----GYPSQP----TPGGYP 367
P G GYP QP TP YP
Sbjct: 408 PSGPQQGHGYPGQPYGSQTPQRYP 431
Score = 74 (31.1 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 25/71 (35%), Positives = 31/71 (43%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQ--PGAYPGQ---TPQYNMSQP 352
+ P Y QQ Q++PP + P QQP Q P YP Q T Q+ SQP
Sbjct: 492 QTPHAQPSYQQQP-QSQPPQLQSSQ-PPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQP 549
Query: 353 PYGGYPSQPTP 363
PY P +P
Sbjct: 550 PYS-QPQAQSP 559
Score = 67 (28.6 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 29/74 (39%), Positives = 31/74 (41%)
Query: 304 GGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGA-YPGQTPQ-YNMS-----QPPYGG 356
G Q Y P S G PS Q G+GY PG Y QTPQ Y M+ Q GG
Sbjct: 388 GKMRPQPYGGTNPYSQ-QQGPPSGPQQGHGY--PGQPYGSQTPQRYPMTMQGRAQSAMGG 444
Query: 357 --YPSQPTPGGYPG 368
Y Q P G G
Sbjct: 445 LSYTQQIPPYGQQG 458
Score = 63 (27.2 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 20/55 (36%), Positives = 24/55 (43%)
Query: 304 GGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
GG + Y A P + G P+ Q Y Y AYP P Y +S P GG P
Sbjct: 188 GGGGLEPY-AGPQQNSHDHGFPNHQYNSY-YPNRSAYPPPAPAYALSSPR-GGTP 239
Score = 58 (25.5 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 292 ISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP 345
++ N P GG S G A PP S A ++ P YG+ QP Y G++P
Sbjct: 113 LNNNLTEPPGGGGGGSSDGVGA-PPHS----AAAALPPPAYGFGQP--Y-GRSP 158
Score = 57 (25.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 21/56 (37%), Positives = 25/56 (44%)
Query: 314 RPPTSWGTPGA-PSMQQPGY----GYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPG 364
RPP+ PSM Q GY+Q P Q PQY+ QP P QP+ G
Sbjct: 727 RPPSGQSDSIMHPSMNQSSIAQDRGYMQRN--P-QMPQYSSPQPGSALSPRQPSGG 779
Score = 52 (23.4 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 29/124 (23%), Positives = 47/124 (37%)
Query: 14 SKRKYEDQTTPPSAA--ARRPTGFSAPD-PAVAPTSYNSVPPPADEFQDFQAA--KRRAE 68
S + Q+ PP + A+ P P PA + S + P Q Q A ++R
Sbjct: 539 STTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFP 598
Query: 69 QIAARLCNSVSAEAKR-PRVENGSGGFDSADKGFSSPPSDLKSIPAP-SAIPVSYGGYQS 126
+S ++A P + + GG + + S PS L + +P+ G S
Sbjct: 599 PPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALS 658
Query: 127 MGTS 130
G S
Sbjct: 659 PGVS 662
Score = 49 (22.3 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 74 LCNSVSAEAKRPRVEN------GSGGFDSADKGFSSPP-SDLKSIPAPSAIPVSYGGYQS 126
L NS RP + N G GG S+D G +PP S ++P P+ YG Q
Sbjct: 100 LKNSNGNAGPRPALNNNLTEPPGGGGGGSSD-GVGAPPHSAAAALPPPA-----YGFGQP 153
Query: 127 MGTS 130
G S
Sbjct: 154 YGRS 157
Score = 49 (22.3 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 40 PAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADK 99
PA A + N PPP E + +A +++ E+ + +A A+R ++ +G ++
Sbjct: 7 PAAASSLGNPPPPPPSELK--KAEQQQREEAGGEA--AAAAAAERGEMKAAAG--QESEG 60
Query: 100 GFSSPPSDL 108
PP L
Sbjct: 61 PAVGPPQPL 69
Score = 46 (21.3 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 29/122 (23%), Positives = 37/122 (30%)
Query: 5 PQYSSDGTPSKRK---YEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQ 61
P + GTP T PS+A R G+ D + P + PAD
Sbjct: 279 PSAAGGGTPQPTATPTLNQLLTSPSSA-RGYQGYPGGDYSGGPQDGGAGKGPADMASQCW 337
Query: 62 AAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSY 121
A A AA + P SGG P S + + P Y
Sbjct: 338 GAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMR--PQPY 395
Query: 122 GG 123
GG
Sbjct: 396 GG 397
Score = 41 (19.5 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 22/93 (23%), Positives = 36/93 (38%)
Query: 33 TGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSG 92
+ + P PA A +S P + AA + ++ +S S+ + R G
Sbjct: 220 SAYPPPAPAYALSSPRGGTPGSGAAA---AAGSKPPPSSSASASSSSSSFAQQRFGAMGG 276
Query: 93 GFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQ 125
G SA G + P+ ++ P S GYQ
Sbjct: 277 GGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQ 309
>UNIPROTKB|B4DR34 [details] [associations]
symbol:SS18 "Protein SSXT" species:9606 "Homo sapiens"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0048013 "ephrin receptor signaling pathway"
evidence=IEA] GO:GO:0000226 GO:GO:0042493 GO:GO:0007243
GO:GO:0000902 GO:GO:0048013 GO:GO:0005881 HOVERGEN:HBG003892
InterPro:IPR007726 PANTHER:PTHR23107 UniGene:Hs.129261
EMBL:AC091021 HGNC:HGNC:11340 ChiTaRS:SS18 EMBL:AK299082
IPI:IPI01015658 STRING:B4DR34 Ensembl:ENST00000539849
Uniprot:B4DR34
Length = 336
Score = 155 (59.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 63/172 (36%), Positives = 70/172 (40%)
Query: 411 YSYS-QPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
YS+ Q P G NQQ Y D + Y GY Q P +QGY+ Y + +
Sbjct: 193 YSHGGQGPPEGMNQQ---YYPDGHNDY-----GYQQ--PSYPEQGYDRP--YEDSSQHYY 240
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
EG YG Q D+ Q PPP QQGY QQ P YP Q Q YG P S
Sbjct: 241 EGGNSQYGQQQDAYQGPPP--------QQGYPPQQQQYPGQQGYPGQ---QQGYG--P-S 286
Query: 530 QSGYGSQVP--PQS-G--YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ 576
Q G G Q P PQ G Y GY Q P PP G G Y Q
Sbjct: 287 QGGPGPQYPNYPQGQGQQYGGYRPTQPGPP--QPPQQRPYGYDQGQYGNYQQ 336
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 54/193 (27%), Positives = 64/193 (33%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP +N G H GQ + N+ N+S + S
Sbjct: 15 PPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSS 74
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-----PSPNTASYPPQGAT---QP---SYG 524
+G+ G + P QS Q GQ P PN + P QG QP Y
Sbjct: 75 HGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYN 134
Query: 525 VPPTSQSGYGSQVPPQS--GYAGYG---MPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
+P Y Q PP G G M Q Q P PP G QQ G YG Y
Sbjct: 135 MPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-Y 193
Query: 580 SHS-QPPPSSYAQ 591
SH Q PP Q
Sbjct: 194 SHGGQGPPEGMNQ 206
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 64/218 (29%), Positives = 73/218 (33%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE-- 470
+ QPP+ YN QG Q Y G P GQ + G Y +
Sbjct: 125 HQQPPSQQYNMP-QGGGQH-YQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQY 182
Query: 471 -GHTPSYGAQ-GDSTQAPPPVQSSAAM--GQQGYGTGQQPSPNTASYPPQGATQP----S 522
G YG Q Q PP + G YG QQPS YP QG +P S
Sbjct: 183 SGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY-QQPS-----YPEQGYDRPYEDSS 236
Query: 523 YGVPPTSQSGYGSQV------PPQSGYAGYGM--PQAQKPLANPPAYGQTQQSPGSA--- 571
S YG Q PPQ GY P Q YG +Q PG
Sbjct: 237 QHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPN 296
Query: 572 --GGYGQP--GYSHSQP-PPSSYAQPDSGSQRAPPSNY 604
G GQ GY +QP PP Q G + NY
Sbjct: 297 YPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNY 334
Score = 56 (24.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 21/58 (36%), Positives = 26/58 (44%)
Query: 312 QARPPTSWGTPGAPSMQ-QPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPG 368
Q +P ++G P P+M QP G + P Q QYNM Q Y Q P G G
Sbjct: 101 QGQPMGNYG-P-RPNMSMQPNQGPMMHQQPPSQ--QYNMPQGGGQHYQGQQPPMGMMG 154
>RGD|61832 [details] [associations]
symbol:Atn1 "atrophin 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008432 "JUN kinase binding"
evidence=IMP] [GO:0009404 "toxin metabolic process" evidence=ISO]
[GO:0016363 "nuclear matrix" evidence=ISO] [GO:0016477 "cell
migration" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030011 "maintenance of cell polarity"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0031252
"cell leading edge" evidence=IDA] [GO:0045664 "regulation of neuron
differentiation" evidence=IMP] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0050827 "toxin receptor binding"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=ISO]
RGD:61832 GO:GO:0005634 GO:GO:0048471 GO:GO:0003714 GO:GO:0045664
GO:GO:0031252 GO:GO:0016477 GO:GO:0030054 GO:GO:0051402
GO:GO:0006351 GO:GO:0000122 GO:GO:0016363 GO:GO:0009404 CTD:1822
eggNOG:NOG331121 HOVERGEN:HBG075369 KO:K05626 OrthoDB:EOG4RFKT4
GO:GO:0030011 InterPro:IPR017993 InterPro:IPR002951 Pfam:PF03154
PRINTS:PR01222 HOGENOM:HOG000231091 EMBL:U31777 EMBL:X89453
IPI:IPI00558888 RefSeq:NP_058924.2 UniGene:Rn.11305
ProteinModelPortal:P54258 MINT:MINT-93051 STRING:P54258
PhosphoSite:P54258 GeneID:29515 KEGG:rno:29515 UCSC:RGD:61832
NextBio:609449 ArrayExpress:P54258 Genevestigator:P54258
GermOnline:ENSRNOG00000014611 GO:GO:0008432 Uniprot:P54258
Length = 1183
Score = 141 (54.7 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 61/213 (28%), Positives = 80/213 (37%)
Query: 410 GYSYSQPPASGYN---QQGQGYAQDSYGGYHAPQSGYGQ--AAPYDQQQG-------YNS 457
G S + PPA ++ QQ Q Q +H SG A P+ + YN
Sbjct: 466 GQSTAHPPAPAHHHHQQQQQPQPQPQPQQHHHGNSGPPPPGAYPHPLESSNSHHAHPYNM 525
Query: 458 AAGYGNVNNTSQ-EGHTP-SYGAQGDSTQAP--PPVQSSAAMGQQGYGTGQQPSPNTASY 513
+ G++ H P S+G S P PPV SS+ S ++S
Sbjct: 526 SPSLGSLRPYPPGPAHLPPSHGQVSYSQAGPNGPPVSSSSNSSGSSSQAAYSCSHPSSSQ 585
Query: 514 PPQGATQPSYGVPP-TSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAG 572
PQGA+ P VPP T+ S S V + G A P PP Y + SPGS
Sbjct: 586 GPQGASYPFPPVPPITTSSATLSTVIATVASSPAGYKTASPP--GPPQYSKRAPSPGSYK 643
Query: 573 GYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
PGY PP P +PP+ G
Sbjct: 644 TATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPG 676
Score = 111 (44.1 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 54/176 (30%), Positives = 69/176 (39%)
Query: 434 GGYHAPQS----GYGQAAPYDQQQGYNS-AAGYGNVNNTSQEGHTPSYGAQGDSTQAPP- 487
G H P S Y QA P +S ++G + S + S G QG S PP
Sbjct: 538 GPAHLPPSHGQVSYSQAGPNGPPVSSSSNSSGSSSQAAYSCSHPSSSQGPQGASYPFPPV 597
Query: 488 -PVQSSAAMGQQGYGT-GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAG 545
P+ +S+A T P+ + PP G Q S P S Y + PP GY
Sbjct: 598 PPITTSSATLSTVIATVASSPAGYKTASPP-GPPQYSKRAP--SPGSYKTATPP--GYKP 652
Query: 546 YGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPP 601
G P + + PP Y T SP + G +PG P P A P S S PP
Sbjct: 653 -GSPPSFRT-GTPPGYRGT--SPPAGPGTFKPGSPTVGPGPLPPAGPSSLSSLPPP 704
Score = 93 (37.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 48/164 (29%), Positives = 67/164 (40%)
Query: 456 NSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAA----MGQQGYGTGQQPSPNT- 510
N+ G GN+ + P A P+ +++A MG Q G PSP+
Sbjct: 278 NTPVGAGNLPSAPPPATFPHVTPNLPPPPALRPLNNASASPPGMGAQPI-PGHLPSPHAM 336
Query: 511 ----ASYPP---QGAT-QPS-YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAY 561
+ PP +G T PS + +PP S S G PP Y Y + A+ +
Sbjct: 337 GQGMSGLPPGPEKGPTLAPSPHPLPPASSSAPG---PPMR-YP-YSSCSSSSVAASSSSS 391
Query: 562 GQTQQSPGSAGGYGQPGYSHSQPPPSSYA---QPDSGSQRAPPS 602
T Q P S P Y HS PPP+S + QP +Q + PS
Sbjct: 392 AATSQYPASQT---LPSYPHSFPPPTSMSVSNQPPKYTQPSLPS 432
Score = 88 (36.0 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 73/314 (23%), Positives = 92/314 (29%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGY-GYVQPGAYPGQTPQ--------YNMS 350
PA A + QQ Q +P P G G PGAYP YNMS
Sbjct: 473 PAPAHHHHQQQQQPQPQPQ------PQQHHHGNSGPPPPGAYPHPLESSNSHHAHPYNMS 526
Query: 351 QPPYGGY-PSQPTPGGYP---GNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 406
P G P P P P G
Sbjct: 527 -PSLGSLRPYPPGPAHLPPSHGQVSYSQAGPNGPPVSSSSNSSGSSSQAAYSCSHPSSSQ 585
Query: 407 XXXGYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNN 466
G SY PP + +P +GY A+P Q A G+
Sbjct: 586 GPQGASYPFPPVPPITTSSATLSTVIATVASSP-AGYKTASPPGPPQYSKRAPSPGSYKT 644
Query: 467 TSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
+ G+ P +PP ++ G +G T P T + P T +P
Sbjct: 645 ATPPGYKPG---------SPPSFRTGTPPGYRG--TSPPAGPGT--FKPGSPTVGPGPLP 691
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYG-QTQQSPGSAGGYGQPGYSHSQPP 585
P S S +PP G P + PA +T +SP P S S PP
Sbjct: 692 PAGPSSLSS-LPPPPAAPTTGPPLTATQIKQEPAEEYETPESPVP------PARSPS-PP 743
Query: 586 PSSYAQPDSGSQRA 599
P P SQ A
Sbjct: 744 PKVVDVPSHASQSA 757
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 37/122 (30%), Positives = 51/122 (41%)
Query: 24 PPSAAARRP-TGFSAPDPAVAPTSYNS-VPPPADEFQDFQAAKRRAEQIAARLCNSVSAE 81
PP + R+P +GF P P+V PT Y++ + PP FQ A +L +
Sbjct: 170 PPDSIPRQPESGFE-PHPSVPPTGYHAPMEPPTSRL--FQGPPPGAPPPHPQLYPGSAGG 226
Query: 82 AKRPRVENG-SGGFDSADKGFSSPPSDLKSIPAPSA-IPVSYGGYQSMGTSKKIEIPNIR 139
G GG ++ G PPS K P P+ IP+S G +K PN
Sbjct: 227 GVLSGPPMGPKGGAAASSVG---PPSGGKQHPPPTTPIPISSSGASGAPPAKP---PNTP 280
Query: 140 VG 141
VG
Sbjct: 281 VG 282
Score = 57 (25.1 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 19/48 (39%), Positives = 20/48 (41%)
Query: 310 GYQA--RPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG 355
GY A PPTS G P PG P YPG +S PP G
Sbjct: 192 GYHAPMEPPTSRLFQGPP----PGAPPPHPQLYPGSAGGGVLSGPPMG 235
Score = 55 (24.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 28/102 (27%), Positives = 38/102 (37%)
Query: 24 PPSAAARRPTGF----SAPDPAVAP-TSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSV 78
PP+ P G SAP PA P + N PPPA + A + A+ +
Sbjct: 272 PPAKPPNTPVGAGNLPSAPPPATFPHVTPNLPPPPA--LRPLNNASASPPGMGAQ---PI 326
Query: 79 SAEAKRPR-VENGSGGFDSA-DKGFSSPPSDLKSIPAPSAIP 118
P + G G +KG + PS PA S+ P
Sbjct: 327 PGHLPSPHAMGQGMSGLPPGPEKGPTLAPSPHPLPPASSSAP 368
Score = 50 (22.7 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 20/53 (37%), Positives = 21/53 (39%)
Query: 315 PPT---SWGTPGAPS------MQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
PPT S P AP+ QQP QP P Q N PP G YP
Sbjct: 462 PPTGGQSTAHPPAPAHHHHQQQQQP-----QPQPQPQQHHHGNSGPPPPGAYP 509
Score = 49 (22.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 18/68 (26%), Positives = 25/68 (36%)
Query: 5 PQYSSDGTPSKRKYEDQTTPPSAAARR--PTGFSAPDPAVAPTSYNSVP-PPADEFQDFQ 61
P+Y+ PS+ + PP R P + P P PT S PPA Q
Sbjct: 423 PKYTQPSLPSQAVWSQGPPPPPPPYGRLLPNNNTHPGP-FPPTGGQSTAHPPAPAHHHHQ 481
Query: 62 AAKRRAEQ 69
++ Q
Sbjct: 482 QQQQPQPQ 489
Score = 46 (21.3 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQ-PGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPT 362
S A +S T P+ Q P Y P ++P T +QPP PS P+
Sbjct: 380 SSSSVAASSSSSAATSQYPASQTLPSY----PHSFPPPTSMSVSNQPPKYTQPSLPS 432
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 22 TTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
+ PP A T P PA+ P + S PP
Sbjct: 288 SAPPPATFPHVTPNLPPPPALRPLNNASASPP 319
Score = 43 (20.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 24/94 (25%), Positives = 38/94 (40%)
Query: 274 IDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYG 333
+DG S + + ++ +NR +P++ YS + +S G P+ +P
Sbjct: 107 LDGRSINDDGSSD-PRDIDQDNRSTSPSI---YSPGSVENDSDSSSGLSQGPA--RP--- 157
Query: 334 YVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYP 367
Y P +P P S PP P QP G P
Sbjct: 158 YHPPPLFP---P----SPPPPDSIPRQPESGFEP 184
Score = 43 (20.2 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 22/67 (32%), Positives = 24/67 (35%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ 360
A + G G Q PPT TP P G P A P TP G PS
Sbjct: 242 ASSVGPPSGGKQHPPPT---TP-IPISSSGASG--APPAKPPNTPV------GAGNLPSA 289
Query: 361 PTPGGYP 367
P P +P
Sbjct: 290 PPPATFP 296
Score = 38 (18.4 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 87 VENGSGGFDSADKG----FSSPPSDLKSIPAPSAIP 118
VEN S +G + PP S P P +IP
Sbjct: 140 VENDSDSSSGLSQGPARPYHPPPLFPPSPPPPDSIP 175
Score = 38 (18.4 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 25 PSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
P + PT AP P P + +S P P
Sbjct: 344 PPGPEKGPT--LAPSPHPLPPASSSAPGP 370
>UNIPROTKB|J3KQU3 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:7886 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 Ensembl:ENST00000449198 Uniprot:J3KQU3
Length = 277
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 95 DSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYL 154
D + S P+ KS P+ P++ S KI +PN G+IIGK G T+K +
Sbjct: 104 DRIKQTLPSSPTTTKSSPSD---PMT----TSRANQVKIIVPNSTAGLIIGKGGATVKAV 156
Query: 155 QLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGS--GIVAR 212
QSGA +Q+++ + +N R V + G PEQ KA +LI + E GS I
Sbjct: 157 MEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYA 215
Query: 213 RLTGQAGSDH 222
+TG + +
Sbjct: 216 NVTGPVANSN 225
Score = 120 (47.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
+PN+ GL+IGKGG T+K + ++GA +Q+ P G ER V + G EQ A +
Sbjct: 137 VPNSTAGLIIGKGGATVKAVMEQSGAWVQLS--QKPDGINLQERVVTVSGEPEQNRKAVE 194
Query: 287 LVNEVISEN 295
L+ + I E+
Sbjct: 195 LIIQKIQED 203
Score = 91 (37.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 12 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 71
Query: 192 EQLINDVLAE 201
I + + E
Sbjct: 72 HGFIAEKIRE 81
>MGI|MGI:97773 [details] [associations]
symbol:Prh1 "proline rich protein HaeIII subfamily 1"
species:10090 "Mus musculus" [GO:0005576 "extracellular region"
evidence=IEA] MGI:MGI:97773 GO:GO:0005576 InterPro:IPR026086
PANTHER:PTHR23203 EMBL:M12099 EMBL:M11902 IPI:IPI00116540
PIR:A24264 PIR:C29149 UniGene:Mm.425348 UniGene:Mm.484054
PRIDE:P05142 CleanEx:MM_PRH1 Genevestigator:P05142
GermOnline:ENSMUSG00000059934 Uniprot:P05142
Length = 261
Score = 147 (56.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 58/190 (30%), Positives = 67/190 (35%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYD-QQQGYNSAAGYGNVNNTSQEGHTP 474
PP G Q GG P+ G P QQ+ G +G P
Sbjct: 66 PPPPGGPQPRPPQGPPPPGGPQ-PRPPQGPPPPGGPQQRPPQGPPPPGGPQQRPPQGPPP 124
Query: 475 SYGAQGDSTQAPPPVQSSAAMGQQGYG--TGQQPSPNTASYPPQGAT-QPSYGVPPTSQS 531
G Q Q PPP QG G QP P PP G +P G PPT
Sbjct: 125 PGGPQPRPPQGPPPPGGPQLRPPQGPPPPAGPQPRPPQGPPPPAGPQPRPPQGPPPTGPQ 184
Query: 532 GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQ 591
+Q PP +G G PQ Q+P PP G Q P G P QP P+
Sbjct: 185 PRPTQGPPPTG--G---PQ-QRPPQGPPPPGGPQPRPPQ----GPPPPGGPQPSPTQGPP 234
Query: 592 PDSGSQRAPP 601
P G Q+ PP
Sbjct: 235 PTGGPQQTPP 244
Score = 143 (55.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 49/139 (35%), Positives = 54/139 (38%)
Query: 466 NTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGT--GQQPSPNTASYPPQGATQ-PS 522
N SQ+G P G Q Q PPP QG G QP P PP G Q P
Sbjct: 46 NGSQQGPPPPGGPQPRPPQGPPPPGGPQPRPPQGPPPPGGPQPRPPQGPPPPGGPQQRPP 105
Query: 523 YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHS 582
G PP G Q PPQ G G PQ + P PP G + P G P +
Sbjct: 106 QGPPPP---GGPQQRPPQ-GPPPPGGPQPRPPQGPPPPGGPQLRPP-----QGPPPPAGP 156
Query: 583 QPPPSSYAQPDSGSQRAPP 601
QP P P +G Q PP
Sbjct: 157 QPRPPQGPPPPAGPQPRPP 175
Score = 130 (50.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 55/175 (31%), Positives = 58/175 (33%)
Query: 416 PPASGYNQQGQGYAQDSYGG--YHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
PP G QQ GG PQ P Q + G +G
Sbjct: 94 PPPPGGPQQRPPQGPPPPGGPQQRPPQGPPPPGGP--QPRPPQGPPPPGGPQLRPPQGPP 151
Query: 474 PSYGAQGDSTQAPPPVQSSAAMGQQGYG-TGQQPSPNTASYPPQGATQ--PSYGVPPTSQ 530
P G Q Q PPP QG TG QP P T PP G Q P G PP
Sbjct: 152 PPAGPQPRPPQGPPPPAGPQPRPPQGPPPTGPQPRP-TQGPPPTGGPQQRPPQGPPPPG- 209
Query: 531 SGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPP 585
G Q P G G PQ P PP G QQ+P AG P Q P
Sbjct: 210 ---GPQPRPPQGPPPPGGPQPS-PTQGPPPTGGPQQTPPLAGNTQGPPQGRPQGP 260
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 43/119 (36%), Positives = 45/119 (37%)
Query: 484 QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGAT-QPSYGVPPTSQSGYGSQVPPQSG 542
Q PPV S G G G QP P PP G +P G PP G Q P G
Sbjct: 40 QPRPPVNGSQ-QGPPPPG-GPQPRPPQGPPPPGGPQPRPPQGPPPPG----GPQPRPPQG 93
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPP 601
G PQ Q+P PP G QQ P G P QP P P G Q PP
Sbjct: 94 PPPPGGPQ-QRPPQGPPPPGGPQQRPPQ----GPPPPGGPQPRPPQGPPPPGGPQLRPP 147
Score = 78 (32.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 25/69 (36%), Positives = 28/69 (40%)
Query: 299 NPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
N + G G Q RPP PG P + P G PG G P+ PP GG P
Sbjct: 46 NGSQQGPPPPGGPQPRPPQGPPPPGGPQPRPP-QGPPPPG---GPQPRPPQGPPPPGG-P 100
Query: 359 SQPTPGGYP 367
Q P G P
Sbjct: 101 QQRPPQGPP 109
Score = 70 (29.7 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 27/82 (32%), Positives = 35/82 (42%)
Query: 293 SENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPS----MQQPGYGYVQPGAYPGQTPQYN 348
++N+I+ P S G+Q RPP + G P +P G PG G P+
Sbjct: 23 NQNQIQIPNQRPPPS--GFQPRPPVNGSQQGPPPPGGPQPRPPQGPPPPG---GPQPRPP 77
Query: 349 MSQPPYGG---YPSQ--PTPGG 365
PP GG P Q P PGG
Sbjct: 78 QGPPPPGGPQPRPPQGPPPPGG 99
Score = 38 (18.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 8/21 (38%), Positives = 8/21 (38%)
Query: 348 NMSQPPYGGYPSQPTPGGYPG 368
N PP G P P G G
Sbjct: 31 NQRPPPSGFQPRPPVNGSQQG 51
Score = 37 (18.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 12/43 (27%), Positives = 13/43 (30%)
Query: 11 GTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
G P R + P R P G P P PPP
Sbjct: 56 GGPQPRPPQGPPPPGGPQPRPPQG-PPPPGGPQPRPPQGPPPP 97
>ZFIN|ZDB-GENE-030131-5725 [details] [associations]
symbol:arid1ab "AT rich interactive domain 1Ab
(SWI-like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
ZFIN:ZDB-GENE-030131-5725 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 EMBL:CABZ01050711 EMBL:CT027837
IPI:IPI00485842 Ensembl:ENSDART00000084272 Bgee:F1RE50
Uniprot:F1RE50
Length = 2135
Score = 176 (67.0 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 67/209 (32%), Positives = 82/209 (39%)
Query: 413 YSQPPASGYNQQGQ----GYAQDSYGGYHAPQSGYGQAAPYDQQ-QGY---NSAAGYGNV 464
Y Q A Y QQG G Q SY P +G G PY QQ G S YG
Sbjct: 381 YGQNQAGYYGQQGPSPHGGPQQSSYP--QQPSTGPGSQPPYSQQPSGTPHGQSGTSYGQP 438
Query: 465 N--NTSQEGHTP-SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASY--PPQGAT 519
+ +G P S Q S Q+P P QS QG GQQ S + Y PP G+
Sbjct: 439 QGPHVPNQGQPPYSQTPQSQSGQSPFP-QSQGPTQSQGPSQGQQGSQSQPGYTHPPSGSG 497
Query: 520 QPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLAN---PPAYGQTQ--QSPGSAGGY 574
QP+ P+ Q Q PPQS PQ + + P Y QT Q+
Sbjct: 498 QPAQQQGPSQQQ----QGPPQSQTPSSAPPQPSQQTSGQGQPSPYSQTPPLQTQQQQQQQ 553
Query: 575 GQPGYSHSQPPPSSYAQPDSGSQRAPPSN 603
Q + PPP +Q SQ + PS+
Sbjct: 554 QQSPFQRFPPPPQELSQDSFSSQSSAPSS 582
Score = 175 (66.7 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 69/208 (33%), Positives = 83/208 (39%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQAAP--YDQQQ-GYNSAAGYGNVN 465
G Y P Y QG + G + Q GYGQ P Y Q Q GY G + +
Sbjct: 339 GQGYGPPGPQRYPMGMQGRTSGNLSGIQYGQQMGYGQHGPGGYGQNQAGYYGQQG-PSPH 397
Query: 466 NTSQEGHTPSYGAQGDSTQAPPPVQSSAAM-GQQGYGTGQQPSPNTASYPPQGATQPSYG 524
Q+ P + G +Q P Q S GQ G GQ P+ P QG QP Y
Sbjct: 398 GGPQQSSYPQQPSTGPGSQPPYSQQPSGTPHGQSGTSYGQPQGPHV---PNQG--QPPYS 452
Query: 525 VPPTSQSGYG----SQVPPQSGYAGYGMP--QAQKPLANPPA-YGQTQQSPGSAGGYGQP 577
P SQSG SQ P QS G Q+Q +PP+ GQ Q G + Q
Sbjct: 453 QTPQSQSGQSPFPQSQGPTQSQGPSQGQQGSQSQPGYTHPPSGSGQPAQQQGPS--QQQQ 510
Query: 578 GYSHSQPPPSSYAQPDSG-SQRAPPSNY 604
G SQ P S+ QP S + PS Y
Sbjct: 511 GPPQSQTPSSAPPQPSQQTSGQGQPSPY 538
Score = 170 (64.9 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 71/207 (34%), Positives = 84/207 (40%)
Query: 421 YNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQG 480
Y+QQ QG S G P GYG P G GN++ Q G YG G
Sbjct: 321 YSQQ-QGPPPSSQQGPPYPGQGYGPPGPQRYPMGMQGRTS-GNLSGI-QYGQQMGYGQHG 377
Query: 481 DSTQAPPPVQSSAAM-GQQGYGTGQQPSPNTASYPPQGAT----QPSYGVPPTS----QS 531
Q+ A GQQG P +SYP Q +T QP Y P+ QS
Sbjct: 378 PGGYG----QNQAGYYGQQG--PSPHGGPQQSSYPQQPSTGPGSQPPYSQQPSGTPHGQS 431
Query: 532 G--YGS-QVP--PQSGYAGYGM-PQAQKPLAN-PPAYGQTQ-QSP--GSAGGYGQPGYSH 581
G YG Q P P G Y PQ+Q + P + G TQ Q P G G QPGY+H
Sbjct: 432 GTSYGQPQGPHVPNQGQPPYSQTPQSQSGQSPFPQSQGPTQSQGPSQGQQGSQSQPGYTH 491
Query: 582 SQPPPSSYAQP-----DSGSQRAPPSN 603
PPS QP S Q+ PP +
Sbjct: 492 ---PPSGSGQPAQQQGPSQQQQGPPQS 515
Score = 144 (55.7 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 63/185 (34%), Positives = 72/185 (38%)
Query: 432 SYGGYHAPQSGYGQ--AAPYDQQQGYNSAAGYGNVNNTSQEGHTP--SYG--AQGDSTQA 485
SY Y A + G GQ AA G +S G G+ + H P S G Q + TQ
Sbjct: 242 SYQNYPASEYG-GQEGAAKGPGDMGSSSQYGGGHPAWQQRSHHPPPMSPGNTGQANRTQP 300
Query: 486 PPPVQSSAAMGQQGYGTGQQPSPNTASYPP---QGATQPSYGVPPTSQSGY--GSQVPPQ 540
P P+ + Q YG G P PP QG P G P Y G Q
Sbjct: 301 PGPMDQVGKIRGQHYGAGN-PYSQQQGPPPSSQQGPPYPGQGYGPPGPQRYPMGMQGRTS 359
Query: 541 SGYAG--YGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-HSQPPPSSYAQ-PDSGS 596
+G YG Q P YGQ Q AG YGQ G S H P SSY Q P +G
Sbjct: 360 GNLSGIQYGQ-QMGYGQHGPGGYGQNQ-----AGYYGQQGPSPHGGPQQSSYPQQPSTGP 413
Query: 597 QRAPP 601
PP
Sbjct: 414 GSQPP 418
Score = 139 (54.0 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 57/192 (29%), Positives = 75/192 (39%)
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNV-NNTSQEGHTPSYGAQGDS 482
Q + Y ++ Y +PQSG +P Q G AG G+ N S + P G G
Sbjct: 708 QDRVYMRNPQMPYGSPQSG-STLSPR-QTSGSQMHAGMGSYPQNNSMGNYGPQSGQYGPQ 765
Query: 483 TQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPP----TSQSG---YGS 535
PP G G S N + QG P G+PP Q G YG
Sbjct: 766 GYPRPPGYGGMPNANYPGGPGMGGSMNPMA--GQGGGGPYGGMPPGRMGPGQMGTRPYGP 823
Query: 536 QVPPQSGYAGYGMP-QAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPP--PS-SYAQ 591
+ P G GMP Q + PP + Q P +AG + P S +PP P+ +
Sbjct: 824 GMGPNMG----GMPPQVASGMCPPPGMNRKPQDPAAAGMHHGPSNSIHRPPGYPNMNQGM 879
Query: 592 PDSGSQRAPPSN 603
+GS APP N
Sbjct: 880 MGAGSPYAPPMN 891
Score = 126 (49.4 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 57/171 (33%), Positives = 65/171 (38%)
Query: 443 YGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGT 502
YG PY QQQG + SQ+G P Y QG PP MG QG +
Sbjct: 315 YGAGNPYSQQQGPPPS---------SQQG--PPYPGQGYG----PPGPQRYPMGMQGRTS 359
Query: 503 GQQPSPNTASYPPQGATQPS-YGVPPTSQSGY-GSQVP-PQSGYAGYGMPQAQK--PLAN 557
G G P YG +Q+GY G Q P P G PQ P +
Sbjct: 360 GNLSGIQYGQQMGYGQHGPGGYG---QNQAGYYGQQGPSPHGGPQQSSYPQQPSTGPGSQ 416
Query: 558 PPAYGQTQQSP-GSAG-GYGQPGYSH----SQPPPSSYAQPDSGSQRAPPS 602
PP Q +P G +G YGQP H QPP S Q SG P S
Sbjct: 417 PPYSQQPSGTPHGQSGTSYGQPQGPHVPNQGQPPYSQTPQSQSGQSPFPQS 467
Score = 116 (45.9 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 57/197 (28%), Positives = 72/197 (36%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G + SQ P+ G QQG S GY P SG GQ A QQQG S G + +
Sbjct: 469 GPTQSQGPSQG--QQGS----QSQPGYTHPPSGSGQPA---QQQG-PSQQQQGPPQSQTP 518
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSP-NTASYPPQGATQPSYGVPPT 528
P Q P P + + Q QQ SP PPQ +Q S+ +
Sbjct: 519 SSAPPQPSQQTSGQGQPSPYSQTPPLQTQQQQQQQQQSPFQRFPPPPQELSQDSFS---S 575
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSP-GSAG----GYGQPGYSHSQ 583
S S P S +G +P + P G P G+ G G G S SQ
Sbjct: 576 QSSAPSSNQPIVSSKSGQDDTMQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQ 635
Query: 584 PPPSSYAQPDSGSQRAP 600
S+ AQ +P
Sbjct: 636 GEQSNPAQSPFSPHTSP 652
Score = 105 (42.0 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 53/193 (27%), Positives = 63/193 (32%)
Query: 417 PASGYNQ-QGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
P G N G+ Y + S G Q G Q PY + G N + +
Sbjct: 1195 PGQGPNSGMGEQYNRASQGPMGNMQMGQRQQYPYGPGYDRRPDSSMGPDGNMGPQPNMMP 1254
Query: 476 YGAQGD--STQAPPPVQSSAAMGQQGYGTGQQPS---PNTAS--YPPQGATQPSYGVPPT 528
GA S PP Q + Q G G PS PN S YP Q QP+Y
Sbjct: 1255 SGADAGMYSPNRPPQQQRHDSYSNQYAGQGAPPSGPYPNQQSGMYPQQ---QPNYTQKRP 1311
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ-PGYSHSQPPPS 587
YG PP + G P + + P A G Q Y PG P P
Sbjct: 1312 VDGVYG---PPAKRHEGDMYPFSGQQ-QGPQAPGAPQSQSDMYNQYNTYPGSERRPPGPQ 1367
Query: 588 SYAQPDSGSQRAP 600
S G R P
Sbjct: 1368 SQFPFGFGRDRGP 1380
Score = 85 (35.0 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 31/85 (36%), Positives = 34/85 (40%)
Query: 298 RNPAMAG-GYSQQGYQARPP-----TSWGTPGAPSMQQPGYGYVQPGAY-PGQTPQYNMS 350
+ P G GY G Q P TS G QQ GYG PG Y Q Y
Sbjct: 333 QGPPYPGQGYGPPGPQRYPMGMQGRTSGNLSGIQYGQQMGYGQHGPGGYGQNQAGYYGQQ 392
Query: 351 QP-PYGG-----YPSQPT--PGGYP 367
P P+GG YP QP+ PG P
Sbjct: 393 GPSPHGGPQQSSYPQQPSTGPGSQP 417
Score = 81 (33.6 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 27/75 (36%), Positives = 33/75 (44%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQP-GYGYVQPGAYPGQT--PQY-NMSQPP 353
+ P+ GG Q Y +P T G+ P QQP G + Q G GQ P N QPP
Sbjct: 392 QGPSPHGGPQQSSYPQQPSTGPGSQ-PPYSQQPSGTPHGQSGTSYGQPQGPHVPNQGQPP 450
Query: 354 YGGYP-SQPTPGGYP 367
Y P SQ +P
Sbjct: 451 YSQTPQSQSGQSPFP 465
Score = 79 (32.9 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 31/92 (33%), Positives = 42/92 (45%)
Query: 287 LVNEVISENRI--RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYG-YVQP---GAY 340
+++ + ++R+ RNP M G Q G P + G S G G Y Q G Y
Sbjct: 701 MLHSSMGQDRVYMRNPQMPYGSPQSGSTLSPRQTSG-----SQMHAGMGSYPQNNSMGNY 755
Query: 341 PGQTPQYNMS---QPP-YGGYPSQPTPGGYPG 368
Q+ QY +PP YGG P+ PGG PG
Sbjct: 756 GPQSGQYGPQGYPRPPGYGGMPNANYPGG-PG 786
Score = 70 (29.7 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 27/72 (37%), Positives = 29/72 (40%)
Query: 300 PAMAGGYSQQGYQARPPTSW---GTPGAPSMQQPGYGYVQPGAYPGQTP-------QYNM 349
PA G SQQ Q PP S P PS Q G G QP Y QTP Q
Sbjct: 499 PAQQQGPSQQ--QQGPPQSQTPSSAPPQPSQQTSGQG--QPSPY-SQTPPLQTQQQQQQQ 553
Query: 350 SQPPYGGYPSQP 361
Q P+ +P P
Sbjct: 554 QQSPFQRFPPPP 565
Score = 62 (26.9 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 28/82 (34%), Positives = 32/82 (39%)
Query: 295 NRIRN--PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYN--MS 350
N RN P AGG Q G Q PPT TP A + Y P TP N ++
Sbjct: 180 NSPRNSQPPAAGG--QPGKQ--PPTGGTTPLATAASYNNQRYNMGNPQPTSTPTLNQLLT 235
Query: 351 QPP----YGGYPSQPTPGGYPG 368
P Y YP+ GG G
Sbjct: 236 SPSSTRSYQNYPASEY-GGQEG 256
Score = 61 (26.5 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 25/74 (33%), Positives = 33/74 (44%)
Query: 286 QLVNEVISENRIRN-PAMAGGYSQQGYQARPPTSWGTP-----GAPSMQQPGYGYVQPGA 339
QL+ S +N PA G Q+G A+ P G+ G P+ QQ + P
Sbjct: 232 QLLTSPSSTRSYQNYPASEYG-GQEG-AAKGPGDMGSSSQYGGGHPAWQQRSHH--PPPM 287
Query: 340 YPGQTPQYNMSQPP 353
PG T Q N +QPP
Sbjct: 288 SPGNTGQANRTQPP 301
Score = 60 (26.2 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 29/92 (31%), Positives = 32/92 (34%)
Query: 294 ENRIRNPAMAGGYSQQG-----YQAR----PPTSWGTPGAPSMQQPGYGYVQPGAYPGQ- 343
E + P G SQ G +Q R PP S G G + QP Q G GQ
Sbjct: 255 EGAAKGPGDMGSSSQYGGGHPAWQQRSHHPPPMSPGNTGQANRTQPPGPMDQVGKIRGQH 314
Query: 344 ----TPQYNMSQPPYGGYPSQPTPG-GY--PG 368
P PP P PG GY PG
Sbjct: 315 YGAGNPYSQQQGPPPSSQQGPPYPGQGYGPPG 346
Score = 59 (25.8 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 22/59 (37%), Positives = 26/59 (44%)
Query: 312 QARPPTSWGTPGAPSMQQP---GYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYP 367
Q +PP S TP + S Q P G Q P Q Q + SQP GY P+ G P
Sbjct: 446 QGQPPYSQ-TPQSQSGQSPFPQSQGPTQSQG-PSQGQQGSQSQP---GYTHPPSGSGQP 499
Score = 58 (25.5 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 21/60 (35%), Positives = 26/60 (43%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGA-YPGQT--PQYNMSQPPYGGYPSQPTP 363
SQ Q++ P S G G+ S QPGY + G+ P Q P PP PS P
Sbjct: 467 SQGPTQSQGP-SQGQQGSQS--QPGYTHPPSGSGQPAQQQGPSQQQQGPPQSQTPSSAPP 523
Score = 56 (24.8 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 18/69 (26%), Positives = 26/69 (37%)
Query: 299 NPAMAGGYSQQGYQARPPTSWGTPGAPS-MQQPGYGYVQPGAYPGQTPQYNM--SQPPYG 355
+P M G + S G P PG PGA+P YN ++ P+
Sbjct: 69 DPDMKNGNGNPS-RVNNNNSQNDSGGPEGNSHPGMAPHHPGAFPPPPYSYNQHYNRAPFH 127
Query: 356 GYPSQPTPG 364
+ Q +PG
Sbjct: 128 QHGGQQSPG 136
Score = 53 (23.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 27/75 (36%), Positives = 32/75 (42%)
Query: 298 RNPAMAGGYSQQGYQARPPTSW--GTPGAPSMQQPGYG---YVQPGAYPGQTPQYNMSQP 352
++P MAG Y PP S G P + P Y Q Y +P+ N SQP
Sbjct: 133 QSPGMAGPAVMDPY---PPNSHEHGYPNHFNNYSPFPNRTPYHQGQGYGMNSPR-N-SQP 187
Query: 353 PY-GGYPS-QPTPGG 365
P GG P QP GG
Sbjct: 188 PAAGGQPGKQPPTGG 202
Score = 46 (21.3 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 8 SSDGTPSKRK--YEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKR 65
S G P++++ + Q PP + + P+ SAP TS P P + Q ++
Sbjct: 494 SGSGQPAQQQGPSQQQQGPPQS--QTPS--SAPPQPSQQTSGQGQPSPYSQTPPLQTQQQ 549
Query: 66 RAEQ 69
+ +Q
Sbjct: 550 QQQQ 553
Score = 43 (20.2 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 8 SSDG---TPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTS 46
SS G P++ + T+P + R P+ PA P S
Sbjct: 633 SSQGEQSNPAQSPFSPHTSPHLSGIRGPSPSPVGSPASGPAS 674
Score = 41 (19.5 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 81 EAKRPRVENGSGGF----DSADKG 100
E+K PR + GS G D AD G
Sbjct: 35 ESKEPRADGGSPGQKELQDGADVG 58
>UNIPROTKB|G4N9Q9 [details] [associations]
symbol:MGG_10692 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001202
Pfam:PF00397 PROSITE:PS50020 SMART:SM00456 Gene3D:2.20.70.10
SUPFAM:SSF51045 EMBL:CM001234 RefSeq:XP_003715885.1
ProteinModelPortal:G4N9Q9 EnsemblFungi:MGG_10692T0 GeneID:2682893
KEGG:mgr:MGG_10692 Uniprot:G4N9Q9
Length = 447
Score = 149 (57.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 60/158 (37%), Positives = 68/158 (43%)
Query: 439 PQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQ 498
P GY A P Q Y + + T G P G S A PP A GQQ
Sbjct: 133 PPPGYPGAPPPIPQSSYPGSPPAPGGDGTRSAGGPP-----GASPYASPP--PGAPYGQQ 185
Query: 499 G-YGTGQQPSPNTASYPPQGATQPSY--GVPPTSQSG-YGSQVPPQSGYAGYGMPQAQKP 554
YG+ PSP A+ PPQG Y G PP + YGS PP A YG P Q+P
Sbjct: 186 PPYGS---PSPYGAA-PPQGGAAAGYFGGAPPPGGAAPYGS--PPPG--APYGSPYGQQP 237
Query: 555 LANPPAYGQTQQSP-GSAGGYGQPGYSHSQPPPSSYAQ 591
+P YGQ QSP G YGQ Y + PP Y Q
Sbjct: 238 --SP--YGQ--QSPYGQQPPYGQQPYGGA-PPTHPYGQ 268
Score = 141 (54.7 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 70/215 (32%), Positives = 81/215 (37%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYD--QQQGYNSAAGYGNVNNTSQE 470
Y P SGY Q PQ G + +D Q+ Y A G +
Sbjct: 67 YGSPHPSGYAATPPPPPQQQPTPPGQPQLPPGWTSHWDPSSQRYYYVEAATGKTQWEAPA 126
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQ----GYGTGQQPSPNTAS-Y--PPQGAT---Q 520
P G APPP+ S+ G G GT P AS Y PP GA Q
Sbjct: 127 APPPPPPPPG-YPGAPPPIPQSSYPGSPPAPGGDGTRSAGGPPGASPYASPPPGAPYGQQ 185
Query: 521 PSYG-------VPPT--SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA 571
P YG PP + +GY PP G A YG P P +P YGQ Q SP
Sbjct: 186 PPYGSPSPYGAAPPQGGAAAGYFGGAPPPGGAAPYGSPPPGAPYGSP--YGQ-QPSP--- 239
Query: 572 GGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSN-YG 605
YGQ QPP Y Q G APP++ YG
Sbjct: 240 --YGQQSPYGQQPP---YGQQPYGG--APPTHPYG 267
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 63/182 (34%), Positives = 73/182 (40%)
Query: 438 APQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQ 497
APQ + Q PY QQ Y YG H Y A T PPP Q GQ
Sbjct: 39 APQQQHQQQPPYGQQP-YQQQP-YGQPPQQYGSPHPSGYAA----TPPPPPQQQPTPPGQ 92
Query: 498 Q----GYGTGQQPSPNTASY--PPQGATQ---PSYGVPPTSQSGYGSQVPPQSGYAGYGM 548
G+ + PS Y G TQ P+ PP GY PP +
Sbjct: 93 PQLPPGWTSHWDPSSQRYYYVEAATGKTQWEAPAAPPPPPPPPGYPGAPPP--------I 144
Query: 549 PQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS-HSQPPPSS-YAQ-PDSGSQRAPPSNYG 605
PQ+ P +PPA G SAGG PG S ++ PPP + Y Q P GS PS YG
Sbjct: 145 PQSSYP-GSPPAPGG--DGTRSAGG--PPGASPYASPPPGAPYGQQPPYGS----PSPYG 195
Query: 606 AA 607
AA
Sbjct: 196 AA 197
Score = 130 (50.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 69/211 (32%), Positives = 81/211 (38%)
Query: 415 QPP--ASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQ-----GYNSAA-GYGNVNN 466
QPP Y QQ G YG H P SGY P QQ G G+ + +
Sbjct: 47 QPPYGQQPYQQQPYGQPPQQYGSPH-P-SGYAATPPPPPQQQPTPPGQPQLPPGWTSHWD 104
Query: 467 TSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYP-----PQGATQP 521
S + + A G TQ P GY P P + SYP P G
Sbjct: 105 PSSQRYYYVEAATG-KTQWEAPAAPPPPPPPPGYPGAPPPIPQS-SYPGSPPAPGGDGTR 162
Query: 522 SYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGY--GQP-- 577
S G PP + S Y S PP A YG Q P +P YG G+A GY G P
Sbjct: 163 SAGGPPGA-SPYAS--PPPG--APYGQ---QPPYGSPSPYGAAPPQGGAAAGYFGGAPPP 214
Query: 578 -GYS-HSQPPPSS-YAQPDSGSQRAPPSNYG 605
G + + PPP + Y P G Q PS YG
Sbjct: 215 GGAAPYGSPPPGAPYGSP-YGQQ---PSPYG 241
Score = 124 (48.7 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 43/134 (32%), Positives = 49/134 (36%)
Query: 412 SY-SQPPASGYNQQGQGYAQDSYGGYHAPQSG--YGQAAPYDQQQGYNSAAGYGNVNNTS 468
SY PPA G + Y +P G YGQ PY Y +A G
Sbjct: 148 SYPGSPPAPGGDGTRSAGGPPGASPYASPPPGAPYGQQPPYGSPSPYGAAPPQGGAA-AG 206
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
G P G PP + GQQ GQQ SP PP G QP G PPT
Sbjct: 207 YFGGAPPPGGAAPYGSPPPGAPYGSPYGQQPSPYGQQ-SPY-GQQPPYGQ-QPYGGAPPT 263
Query: 529 SQSGYGSQVPPQSG 542
G + PQ+G
Sbjct: 264 HPYGQEATKDPQTG 277
Score = 71 (30.1 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 19/61 (31%), Positives = 24/61 (39%)
Query: 312 QARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTP---GGYPG 368
Q + P W + PS Q+ Y G + P PP GYP P P YPG
Sbjct: 92 QPQLPPGWTSHWDPSSQRYYYVEAATGKTQWEAPAAPPPPPPPPGYPGAPPPIPQSSYPG 151
Query: 369 N 369
+
Sbjct: 152 S 152
Score = 67 (28.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 24/61 (39%), Positives = 28/61 (45%)
Query: 308 QQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQ-YNMSQPPYGGYPSQPTPGGY 366
QQ +Q +PP +G P QQP YG P Y P Y + PP QPTP G
Sbjct: 41 QQQHQQQPP--YGQQ--PYQQQP-YGQ-PPQQYGSPHPSGYAATPPPPP--QQQPTPPGQ 92
Query: 367 P 367
P
Sbjct: 93 P 93
Score = 59 (25.8 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 14/39 (35%), Positives = 15/39 (38%)
Query: 329 QPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYP 367
QP A Q + QPPYG P Q P G P
Sbjct: 25 QPAADTATKSAESPAPQQQHQQQPPYGQQPYQQQPYGQP 63
Score = 55 (24.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 27/87 (31%), Positives = 31/87 (35%)
Query: 306 YSQQGYQARPPTSWG---------TPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPY-- 354
Y QQ Y +PP +G TP P QQP QP PG T ++ S Y
Sbjct: 55 YQQQPY-GQPPQQYGSPHPSGYAATPPPPPQQQPTPPG-QPQLPPGWTSHWDPSSQRYYY 112
Query: 355 -------------GGYPSQPTPGGYPG 368
P P P GYPG
Sbjct: 113 VEAATGKTQWEAPAAPPPPPPPPGYPG 139
Score = 53 (23.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 7 YSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPP 52
Y + K ++E PP P G+ P + +SY PP
Sbjct: 111 YYVEAATGKTQWEAPAAPPPPPP--PPGYPGAPPPIPQSSYPGSPP 154
Score = 50 (22.7 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 5 PQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
P ++S PS ++Y + + +AP P P Y PPP
Sbjct: 97 PGWTSHWDPSSQRY--YYVEAATGKTQWEAPAAPPPPPPPPGYPGAPPP 143
Score = 44 (20.5 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 15/65 (23%), Positives = 26/65 (40%)
Query: 3 DEPQYSSDG------TPSKRKYEDQTTPPSAAARRPTGFSAPDPAVA---PTSYNSVPPP 53
DEPQ ++D +P+ ++ Q P + + P P+ Y + PPP
Sbjct: 22 DEPQPAADTATKSAESPAPQQQHQQQPPYGQQPYQQQPYGQPPQQYGSPHPSGYAATPPP 81
Query: 54 ADEFQ 58
+ Q
Sbjct: 82 PPQQQ 86
>UNIPROTKB|G5EF87 [details] [associations]
symbol:swsn-1 "SWI3-like protein" species:6239
"Caenorhabditis elegans" [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003677 GO:GO:0040018
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 GeneTree:ENSGT00390000018166 EMBL:AF230279
PIR:T26449 RefSeq:NP_001256906.1 UniGene:Cel.7072 SMR:G5EF87
IntAct:G5EF87 EnsemblMetazoa:Y113G7B.23 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 WormBase:Y113G7B.23a
OMA:HFDELEQ NextBio:908892 Uniprot:G5EF87
Length = 789
Score = 168 (64.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 61/179 (34%), Positives = 70/179 (39%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQG--YNS-AAGYGNVNNTSQEGHT 473
PA Q +Y GY P QA Y QQG Y+ + +Q+ +
Sbjct: 608 PAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQS 667
Query: 474 PS-YGAQGDSTQAPPPVQSSAAMGQQGYG----TGQQPSPNTASYPPQGA-----TQPSY 523
+ YG G PPP Q GQQ YG GQ P YPPQ QP
Sbjct: 668 QAHYGPPGGGQGPPPPPQ-----GQQYYGGPPPPGQPYGP-PGGYPPQQQRPPYQAQPYP 721
Query: 524 GVPPTSQS-GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSH 581
G PP Q GYG PPQ G+ Y P Q P PP +GQ Q G G PG H
Sbjct: 722 GPPPPQQQRGYGYPPPPQPGHP-YQQPYGQMP---PPPHGQYQPQQQQGGPMGPPGGHH 776
Score = 135 (52.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 55/169 (32%), Positives = 61/169 (36%)
Query: 438 APQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT--PSYGAQGDSTQAPPPVQSSAAM 495
AP AP Q Y GYG Q+ + P G Q + PPP Q
Sbjct: 607 APAPVQAPQAPQAPPQAYQ---GYGGPGGPPQQAYRYPPQQGQQ--YSPYPPPQQQQQHQ 661
Query: 496 GQQGYGTGQQPSPNTASY-PPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKP 554
QQ + + A Y PP G P PP Q YG PP G YG P P
Sbjct: 662 AQQ--------AQSQAHYGPPGGGQGPP--PPPQGQQYYGG--PPPPGQP-YGPPGGYPP 708
Query: 555 LANPPAYGQTQQSPGSAGGYGQPGYSHSQPP-PSS-YAQPDSGSQRAPP 601
P Y Q Q PG Q GY + PP P Y QP G PP
Sbjct: 709 QQQRPPY-QAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQP-YGQMPPPP 755
Score = 112 (44.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 44/142 (30%), Positives = 48/142 (33%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAA--G--YGNVN 465
G YS P QQ Q S Y P G G P QQ Y G YG
Sbjct: 645 GQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPG 704
Query: 466 NTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS-YG 524
+ P Y AQ PPP Q Q+GYG P P P G P +G
Sbjct: 705 GYPPQQQRPPYQAQ--PYPGPPPPQQ-----QRGYGYPPPPQPGHPYQQPYGQMPPPPHG 757
Query: 525 -VPPTSQSGYGSQVPPQSGYAG 545
P Q G G PP + G
Sbjct: 758 QYQPQQQQG-GPMGPPGGHHEG 778
Score = 68 (29.0 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 32/112 (28%), Positives = 42/112 (37%)
Query: 257 IPLHLPPGDTST---ERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQA 313
+P LPPG T + T Q+ S Q + + ++ + R P+ QA
Sbjct: 548 LPAGLPPGFEVTGPPQPTPQVQ-ISAQEAAIPEKMDTSEAATAARPPSTPQAPQAPPVQA 606
Query: 314 RP-PTSWGTPGAPSMQQPGY-GYVQPGAYPGQTPQYNMSQPPYGGYPSQPTP 363
P P P AP Y GY PG P Q +Y PP G P P
Sbjct: 607 APAPVQ--APQAPQAPPQAYQGYGGPGGPPQQAYRY----PPQQGQQYSPYP 652
Score = 64 (27.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 25/62 (40%), Positives = 28/62 (45%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP-YGGYPSQPTPGG 365
S+ ARPP+ TP AP Q P VQ P Q PQ + P Y GY PGG
Sbjct: 584 SEAATAARPPS---TPQAP--QAPP---VQAAPAPVQAPQAPQAPPQAYQGYGG---PGG 632
Query: 366 YP 367
P
Sbjct: 633 PP 634
Score = 54 (24.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 29/112 (25%), Positives = 45/112 (40%)
Query: 17 KYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLCN 76
KY + A +R + S PA P + PP Q +A+ A I ++
Sbjct: 528 KYLENRAKHEAHSRMTS--SGALPAGLPPGFEVTGPPQPTPQVQISAQEAA--IPEKMDT 583
Query: 77 SVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMG 128
S +A A RP + A + P+ +++ AP A P +Y GY G
Sbjct: 584 SEAATAARPP---STPQAPQAPP-VQAAPAPVQAPQAPQAPPQAYQGYGGPG 631
Score = 38 (18.4 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 14/53 (26%), Positives = 21/53 (39%)
Query: 6 QYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQ 58
Q SD P+ T+ A PTG +P ++ S PP +E +
Sbjct: 172 QVDSDARPAPVA-PPPTSHFMVLADTPTGIQPMNPPGKESAGASGEPPKEEIK 223
>UNIPROTKB|F1M8T3 [details] [associations]
symbol:F1M8T3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00550000074311 IPI:IPI00780141
Ensembl:ENSRNOT00000055638 OMA:SISEGNC Uniprot:F1M8T3
Length = 214
Score = 154 (59.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 50/149 (33%), Positives = 74/149 (49%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK GE++K ++ +SGA+I ++ N P R + L G P K+ +I D L
Sbjct: 15 VGSIIGKDGESVKKMRKESGARISISEG-----NCPERIITLAG-PTNF-KSFAMIIDKL 67
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL 259
E S + + +P ++ G +IGKGG IK ++ TG ++QV
Sbjct: 68 EEDISSS---MTNSTAASRPRVTVWLVVPASQCGSLIGKGGCKIKEIRESTGVQVQVAGD 124
Query: 260 HLPPGDTSTERTVQIDGTSEQI-ESAKQL 287
LP STER + I G + I E KQ+
Sbjct: 125 MLP---NSTERAITIAGIPQSIIECVKQI 150
>ZFIN|ZDB-GENE-060503-536 [details] [associations]
symbol:igf2bp2b "insulin-like growth factor 2 mRNA
binding protein 2b" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-060503-536
GO:GO:0003723 EMBL:CR382370 GeneTree:ENSGT00530000063171
EMBL:BX004885 IPI:IPI00919570 PRIDE:F1QN87
Ensembl:ENSDART00000088166 Bgee:F1QN87 Uniprot:F1QN87
Length = 446
Score = 169 (64.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 61/204 (29%), Positives = 98/204 (48%)
Query: 93 GFDSADKGFSSPPSDLK-SIPAPSAI-PVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGET 150
G S+ P S L+ S+ P+ P+ GG Q + + IP VG +IGK G+
Sbjct: 238 GIFSSGMSVLPPASGLRGSLSTPANYSPLLQGGEQEV---VYLFIPTPAVGALIGKKGQH 294
Query: 151 IKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIV 210
IK L +GA I++ D P R V + G PE KA+ I L E E+ +
Sbjct: 295 IKELAHFAGASIKIAAPESPD--EPERMVIITGPPEAQFKAQGRIYGKLKE-ENFFTAKE 351
Query: 211 ARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTER 270
+L H +K+P+ G VIGKGG+T+ +Q T A + ++P P D + +
Sbjct: 352 EVKLEA-----H--IKVPSTAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP-DENDDV 402
Query: 271 TVQIDGTSEQIESAKQLVNEVISE 294
V+I G ++A++ + E++ +
Sbjct: 403 FVKIIGHFFASQTAQRKIREIVQQ 426
Score = 137 (53.3 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 61/218 (27%), Positives = 101/218 (46%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
+I +P VG IIGK G TIK + Q+ +K+ + R A + +++ + + E ++A
Sbjct: 63 RILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENA--GATEKAITIHSSKEGCSQA 120
Query: 192 EQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQAR 249
++I +++ E E+ + IV + +KI N+ VG +IGK G +K ++
Sbjct: 121 CRMILEIM-EKEANDTKIV----------EEVPLKILAHNSLVGRLIGKEGRNLKKIEQD 169
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSEQI-----ESAKQL----VNEVISENRIRNP 300
TG +I + L + ERT+ + G E+ E K+L N+V S N+ N
Sbjct: 170 TGTKITISALQ-DLTVYNQERTISVRGGVEECCKAEGEIMKKLREAHENDVASVNQQTN- 227
Query: 301 AMAG------GYSQQGYQARPPTSW--GTPGAPSMQQP 330
MAG G G PP S G+ P+ P
Sbjct: 228 MMAGLNLSALGIFSSGMSVLPPASGLRGSLSTPANYSP 265
>ZFIN|ZDB-GENE-060929-1258 [details] [associations]
symbol:igf2bp1 "insulin-like growth factor 2 mRNA
binding protein 1" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730 "mRNA
3'-UTR binding" evidence=ISS] [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322
SMART:SM00360 ZFIN:ZDB-GENE-060929-1258 GO:GO:0005634 GO:GO:0006417
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0070937
HOVERGEN:HBG052725 CTD:10642 eggNOG:NOG249985 HOGENOM:HOG000000675
OrthoDB:EOG405S0T EMBL:BC124196 IPI:IPI00800578
RefSeq:NP_001070027.1 UniGene:Dr.81351 ProteinModelPortal:Q08CK7
SMR:Q08CK7 PRIDE:Q08CK7 GeneID:558182 KEGG:dre:558182
InParanoid:Q08CK7 NextBio:20882359 Uniprot:Q08CK7
Length = 598
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 71/234 (30%), Positives = 111/234 (47%)
Query: 104 PPSDLKSIPAPSAIPVSYGG--YQSMGTSKK----IEIPNIRVGVIIGKSGETIKYLQLQ 157
PPS ++P P A+ S G Y MG S++ + IP VG +IGK G+ IK L
Sbjct: 380 PPSS--AMPPP-ALGNSVPGPPYGPMGASEQETVHVYIPAQAVGALIGKKGQHIKQLSRF 436
Query: 158 SGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQ 217
+GA I++ EA +S R V + G PE KA+ I L E G + T
Sbjct: 437 AGASIKIA-PAEAP-DSKMRMVIVTGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLET-- 492
Query: 218 AGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGT 277
H +K+ G VIGKGG+T+ +Q T A + V+P P D + V+I G
Sbjct: 493 ----H--IKVAAAAAGRVIGKGGKTVNELQNLTAAEV-VVPREQTP-DEHDQVIVKIIGH 544
Query: 278 SEQIESAKQLVNEVISENRIRNPAMAGGY-SQQGYQARPPTSWGTPGAPSMQQP 330
+ A++ + +++++ ++ GG + QG + T G+P + Q+P
Sbjct: 545 FYASQLAQRKIRDILTQ--VKQQQKGGGMGTPQGPHPQGMTELGSPQGLA-QEP 595
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 69/262 (26%), Positives = 113/262 (43%)
Query: 93 GFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIK 152
G D+ + P + + S IP + Q ++ +P VG IIGK G TI+
Sbjct: 166 GPDNGRRPGYGPRGTSRQMSPGSGIPSKH---QHADIPLRLLVPTQYVGAIIGKEGATIR 222
Query: 153 YLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL-AEAESGGSGIVA 211
+ Q+ +KI V R A + + + + TPE + A ++I +++ EA+
Sbjct: 223 NITKQTQSKIDVHRKENA--GAAEKPISIHSTPEGCSAACRMILEIMNQEAKD------- 273
Query: 212 RRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTE 269
T A D +K+ NN VG +IGK G +K ++ T +I + PL + E
Sbjct: 274 ---TKTA--DEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQ-DLTLYNPE 327
Query: 270 RTVQIDGTSEQIESAKQLVNEVISE---NRI----RNPAMAGGYSQQGYQARPPTSWGTP 322
RT+ + G+ E A+Q + + + E N I + + G + PP+S P
Sbjct: 328 RTITVKGSIEACCLAEQEIMKKVREAYDNDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPP 387
Query: 323 GAPSMQQPGYGYVQPGAYPGQT 344
A PG Y GA +T
Sbjct: 388 PALGNSVPGPPYGPMGASEQET 409
>UNIPROTKB|F1MUI1 [details] [associations]
symbol:TDRKH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 InterPro:IPR002999
GO:GO:0005739 GO:GO:0003723 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00530000063224 OMA:FHADEYL EMBL:DAAA02007247
IPI:IPI00703713 Ensembl:ENSBTAT00000028777 Uniprot:F1MUI1
Length = 566
Score = 131 (51.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 45/155 (29%), Positives = 78/155 (50%)
Query: 130 SKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIA 189
S+++ +P VG IIG+ GETI+ + SGAKI +++E L +R +++ GT +++A
Sbjct: 126 SEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLL-SRLIKISGTQKEVA 184
Query: 190 KAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNN-KVGLVIGKGGETIKNMQA 248
A+ LI + ++E E + +R+ A + K P + + V GG +
Sbjct: 185 AAKHLILEKVSEDEE-----LRKRIAHSAET-RVPRKQPISVRREEVTEPGGAREPTLWK 238
Query: 249 RTGARI-QVIPLHLPP--GDTSTERTVQIDGTSEQ 280
TG + Q PL +PP GD +G+ E+
Sbjct: 239 NTGTSLKQAAPLAVPPHKGDGDVAAVGPEEGSWEK 273
Score = 116 (45.9 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/151 (24%), Positives = 68/151 (45%)
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESA 284
+ +P VG +IG+GGETI+++ +GA+I G R ++I GT +++ +A
Sbjct: 129 LSVPQRSVGRIIGRGGETIRSICKASGAKITCDKES--EGTLLLSRLIKISGTQKEVAAA 186
Query: 285 KQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQT 344
K L+ E +SE+ +A ++ + P S + +PG G +P +
Sbjct: 187 KHLILEKVSEDEELRKRIAHS-AETRVPRKQPIS---VRREEVTEPG-GAREPTLWKNTG 241
Query: 345 PQYN----MSQPPYGGYPSQPTPGGYPGNWD 371
++ PP+ G G G+W+
Sbjct: 242 TSLKQAAPLAVPPHKGDGDVAAVGPEEGSWE 272
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
++ +P V +IIG+ G IK L+ ++GA+I V DTE D+ R + + G P Q+ KA
Sbjct: 56 EMRVPQEAVKLIIGRQGANIKQLRKKTGARIDV--DTE-DIGDE-RVLLISGFPVQVCKA 111
Query: 192 EQLINDVLAE 201
+ I+ +L E
Sbjct: 112 KAAIHQILTE 121
>UNIPROTKB|B4DLD3 [details] [associations]
symbol:SS18 "cDNA FLJ58120, highly similar to SSXT protein"
species:9606 "Homo sapiens" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0000902 "cell morphogenesis"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007243 "intracellular protein kinase cascade" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IEA] GO:GO:0000226
GO:GO:0042493 GO:GO:0007243 GO:GO:0000902 GO:GO:0048013
GO:GO:0005881 HOVERGEN:HBG003892 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 UniGene:Hs.129261 EMBL:AC091021
HGNC:HGNC:11340 ChiTaRS:SS18 EMBL:AK296949 IPI:IPI01011245
STRING:B4DLD3 Ensembl:ENST00000542420 Uniprot:B4DLD3
Length = 395
Score = 155 (59.6 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 63/172 (36%), Positives = 70/172 (40%)
Query: 411 YSYS-QPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
YS+ Q P G NQQ Y D + Y GY Q P +QGY+ Y + +
Sbjct: 252 YSHGGQGPPEGMNQQ---YYPDGHNDY-----GYQQ--PSYPEQGYDRP--YEDSSQHYY 299
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
EG YG Q D+ Q PPP QQGY QQ P YP Q Q YG P S
Sbjct: 300 EGGNSQYGQQQDAYQGPPP--------QQGYPPQQQQYPGQQGYPGQ---QQGYG--P-S 345
Query: 530 QSGYGSQVP--PQS-G--YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ 576
Q G G Q P PQ G Y GY Q P PP G G Y Q
Sbjct: 346 QGGPGPQYPNYPQGQGQQYGGYRPTQPGPP--QPPQQRPYGYDQGQYGNYQQ 395
Score = 140 (54.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 54/193 (27%), Positives = 64/193 (33%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP +N G H GQ + N+ N+S + S
Sbjct: 74 PPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSS 133
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-----PSPNTASYPPQGAT---QP---SYG 524
+G+ G + P QS Q GQ P PN + P QG QP Y
Sbjct: 134 HGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYN 193
Query: 525 VPPTSQSGYGSQVPPQS--GYAGYG---MPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
+P Y Q PP G G M Q Q P PP G QQ G YG Y
Sbjct: 194 MPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-Y 252
Query: 580 SHS-QPPPSSYAQ 591
SH Q PP Q
Sbjct: 253 SHGGQGPPEGMNQ 265
Score = 119 (46.9 bits), Expect = 0.00053, P = 0.00053
Identities = 64/218 (29%), Positives = 73/218 (33%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE-- 470
+ QPP+ YN QG Q Y G P GQ + G Y +
Sbjct: 184 HQQPPSQQYNMP-QGGGQH-YQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQY 241
Query: 471 -GHTPSYGAQ-GDSTQAPPPVQSSAAM--GQQGYGTGQQPSPNTASYPPQGATQP----S 522
G YG Q Q PP + G YG QQPS YP QG +P S
Sbjct: 242 SGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY-QQPS-----YPEQGYDRPYEDSS 295
Query: 523 YGVPPTSQSGYGSQV------PPQSGYAGYGM--PQAQKPLANPPAYGQTQQSPGSA--- 571
S YG Q PPQ GY P Q YG +Q PG
Sbjct: 296 QHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPN 355
Query: 572 --GGYGQP--GYSHSQP-PPSSYAQPDSGSQRAPPSNY 604
G GQ GY +QP PP Q G + NY
Sbjct: 356 YPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNY 393
Score = 56 (24.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 21/58 (36%), Positives = 26/58 (44%)
Query: 312 QARPPTSWGTPGAPSMQ-QPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPG 368
Q +P ++G P P+M QP G + P Q QYNM Q Y Q P G G
Sbjct: 160 QGQPMGNYG-P-RPNMSMQPNQGPMMHQQPPSQ--QYNMPQGGGQHYQGQQPPMGMMG 213
>UNIPROTKB|G4MTN4 [details] [associations]
symbol:MGG_07193 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 Gene3D:2.20.70.10 SUPFAM:SSF51045 EMBL:CM001232
RefSeq:XP_003715399.1 ProteinModelPortal:G4MTN4
EnsemblFungi:MGG_07193T0 GeneID:2683176 KEGG:mgr:MGG_07193
Uniprot:G4MTN4
Length = 366
Score = 147 (56.8 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 67/210 (31%), Positives = 83/210 (39%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGG--YHAPQSG----YGQAAPYDQQQGYNSAAGYGNVNN 466
Y PA+ N G G + ++P+ G A Q Q A G+ N
Sbjct: 89 YETEPAASPNPAGVGGSSSGPAPPPVNSPRPGDPPVSDDAKLAAQMQAEEDARARGSGGN 148
Query: 467 TSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG--YGTGQQPSPNTASYPPQGATQPSYG 524
+ G +P+ G QG Q P + S + G G +G G+Q TA Y Q Y
Sbjct: 149 PNYGGGSPAPG-QGFPNQLPARQERSKS-GILGKLFGKGKQSQ--TAHYGAGPLPQQQYQ 204
Query: 525 VPPTSQ----SGY--GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
P Q +GY G+ PQ GY G G Q P + P YG GGY QPG
Sbjct: 205 QPQHQQGYPGAGYQQGAPYSPQPGYGG-GYQQGA-PYSPQPGYG---------GGYQQPG 253
Query: 579 YSHSQPPPSSYAQPDSGSQRA---PPSNYG 605
Y PPP Y QP G Q PP YG
Sbjct: 254 YG---PPPGPYGQPGYGPQPGYGHPP--YG 278
Score = 142 (55.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 61/183 (33%), Positives = 72/183 (39%)
Query: 424 QGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGY-GNVNNTSQEGHTPSYGAQGDS 482
+G G + GG AP G+ P Q++ S +G G + ++ T YGA
Sbjct: 143 RGSGGNPNYGGGSPAPGQGFPNQLPARQER---SKSGILGKLFGKGKQSQTAHYGA---- 195
Query: 483 TQAPPPVQS-SAAMGQQGY-GTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY--GSQVP 538
P P Q QQGY G G Q A Y PQ P YG GY G+
Sbjct: 196 --GPLPQQQYQQPQHQQGYPGAGYQQG---APYSPQ----PGYG------GGYQQGAPYS 240
Query: 539 PQSGYAG-YGMPQAQKPLANPPAYGQTQQSPGSAGG---YGQPGYSHSQPPPSSYAQPDS 594
PQ GY G Y P P P YGQ P G YGQPGY PP + Y P
Sbjct: 241 PQPGYGGGYQQPGYGPP---PGPYGQPGYGPQPGYGHPPYGQPGYG-GYPPQAGYG-PGM 295
Query: 595 GSQ 597
Q
Sbjct: 296 AQQ 298
Score = 140 (54.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 50/132 (37%), Positives = 57/132 (43%)
Query: 426 QGYAQDSYG-GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQ 484
Q Y Q + GY P +GY Q APY Q GY G + Q G+ Y G
Sbjct: 201 QQYQQPQHQQGY--PGAGYQQGAPYSPQPGYGGGYQQG-APYSPQPGYGGGYQQPG---Y 254
Query: 485 APPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYG-VPPTSQSGYGSQVPPQS-- 541
PPP GQ GYG P P +PP G QP YG PP Q+GYG + Q
Sbjct: 255 GPPP----GPYGQPGYG----PQPGYG-HPPYG--QPGYGGYPP--QAGYGPGMAQQGRG 301
Query: 542 --GYAGYGMPQA 551
G G GMP A
Sbjct: 302 GRGGMGMGMPLA 313
Score = 120 (47.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 34/74 (45%), Positives = 35/74 (47%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAY--PGQTPQYNMSQPPYG-- 355
P GGY QQG P +G G QQPGYG PG Y PG PQ PPYG
Sbjct: 227 PGYGGGY-QQGAPYSPQPGYG--GG--YQQPGYG-PPPGPYGQPGYGPQPGYGHPPYGQP 280
Query: 356 GYPSQPTPGGY-PG 368
GY P GY PG
Sbjct: 281 GYGGYPPQAGYGPG 294
Score = 108 (43.1 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 50/147 (34%), Positives = 58/147 (39%)
Query: 417 PASGYNQQGQGYA-QDSYGG-Y-----HAPQSGYGQAAPYDQQQGYNSAAG-YGNVNNTS 468
P +GY QQG Y+ Q YGG Y ++PQ GYG Y QQ GY G YG
Sbjct: 213 PGAGY-QQGAPYSPQPGYGGGYQQGAPYSPQPGYGGG--Y-QQPGYGPPPGPYGQPGYGP 268
Query: 469 QEGHT-PSYGAQGDSTQAPPPVQSSAAMGQQGYG----TGQ-QPSPNTASYPPQGATQPS 522
Q G+ P YG G PP M QQG G G P A G T +
Sbjct: 269 QPGYGHPPYGQPGYGGY-PPQAGYGPGMAQQGRGGRGGMGMGMPLALGAGAGLLGGTMLA 327
Query: 523 YGVPPTSQSGY--GSQVPPQSGYAGYG 547
+ Q Y G Q + Y G G
Sbjct: 328 GAMHSGQQDAYQEGYQDGAEGDYGGGG 354
Score = 71 (30.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 24/70 (34%), Positives = 29/70 (41%)
Query: 299 NPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
NPA GG S G A PP + PG P + Q A + + P YGG
Sbjct: 98 NPAGVGG-SSSG-PAPPPVNSPRPGDPPVSDDAKLAAQMQAEEDARARGSGGNPNYGG-- 153
Query: 359 SQPTPG-GYP 367
P PG G+P
Sbjct: 154 GSPAPGQGFP 163
Score = 60 (26.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 8 SSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADE--FQDFQ-AAK 64
S+ TP+ K T P AA+ P G AP NS P P D D + AA+
Sbjct: 76 SATATPTDVKKNPYETEP-AASPNPAGVGGSSSGPAPPPVNS-PRPGDPPVSDDAKLAAQ 133
Query: 65 RRAEQIA 71
+AE+ A
Sbjct: 134 MQAEEDA 140
Score = 48 (22.0 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 18/75 (24%), Positives = 31/75 (41%)
Query: 14 SKRKYEDQTTPPSAAARRPTGFSAPD---PAVAPTSYNSVPPPADEFQDFQAAKRRAEQI 70
+K+ D+ P+ PTG APD P+ ++ ++ P D ++ + A
Sbjct: 39 TKKSQWDKPDAPAVPPPPPTGDGAPDGPPPSYQASASSATATPTDVKKNPYETEPAASPN 98
Query: 71 AARLCNSVSAEAKRP 85
A + S S A P
Sbjct: 99 PAGVGGSSSGPAPPP 113
>UNIPROTKB|C9JZY3 [details] [associations]
symbol:PCBP4 "Poly(rC)-binding protein 4" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC115284 HOGENOM:HOG000182823
HGNC:HGNC:8652 IPI:IPI00984041 ProteinModelPortal:C9JZY3 SMR:C9JZY3
STRING:C9JZY3 Ensembl:ENST00000468324 ArrayExpress:C9JZY3
Bgee:C9JZY3 Uniprot:C9JZY3
Length = 168
Score = 146 (56.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 46/146 (31%), Positives = 72/146 (49%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLI---- 195
VG IIGK GET+K ++ QS A+I ++ + P R + G+ + A +I
Sbjct: 29 VGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKL 83
Query: 196 NDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
++ L A + G + +T + IP ++ G +IGK G IK ++ TGA++Q
Sbjct: 84 DEDLCAAPANGGNVSRPPVT-------LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 256 VIPLHLPPGDTSTERTVQIDGTSEQI 281
V LP STER V + G + I
Sbjct: 137 VAGDLLP---NSTERAVTVSGVPDAI 159
>FB|FBgn0261552 [details] [associations]
symbol:ps "pasilla" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEP] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
GO:GO:0000398 HSSP:Q9UNW9 FlyBase:FBgn0261552 EMBL:BT001623
ProteinModelPortal:Q8IGS7 PRIDE:Q8IGS7 InParanoid:Q8IGS7
ArrayExpress:Q8IGS7 Bgee:Q8IGS7 Uniprot:Q8IGS7
Length = 605
Score = 178 (67.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 48/166 (28%), Positives = 85/166 (51%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
KI +P + G IIGK GETI LQ +GA++++++ + + R + G+ E I
Sbjct: 102 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVV 161
Query: 192 EQLINDVLAEAESGGSGIV-ARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQART 250
+ I D + E + IV Q + +PN+ G++IGKGG IK ++ +
Sbjct: 162 MEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEES 221
Query: 251 GARIQVIPLHLPPGDTST-ERTVQIDGTSEQIESA-KQLVNEVISE 294
G+ +Q+ P D S ER + I G E ++A K ++++++ +
Sbjct: 222 GSYVQISQ---KPTDVSLQERCITIIGDKENNKNACKMILSKIVED 264
Score = 128 (50.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 41/133 (30%), Positives = 66/133 (49%)
Query: 73 RLCNSVSAEAKRP-RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSK 131
R S +A A P + N S G +A G ++ + L + + S P G S SK
Sbjct: 467 RHLGSATAPAATPVSLNNNSFGL-TATTG-TATTAQLGGL-SKSPTP----GDLSSKDSK 519
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
+E+P + +G I+G SG ++ +Q SGA +Q+++ + R V + G P IAKA
Sbjct: 520 NVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKA 579
Query: 192 EQLINDVLAEAES 204
+ LI + E E+
Sbjct: 580 QYLIEQKINEEET 592
Score = 37 (18.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 45 TSYNSVPPPADEFQDFQAAKRRAE 68
TS S+ PPA Q Q +++ +
Sbjct: 51 TSSTSISPPAMMMQQHQQQQQQQD 74
>UNIPROTKB|Q15532 [details] [associations]
symbol:SS18 "Protein SSXT" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0048013 "ephrin receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] GO:GO:0005634 GO:GO:0000226
GO:GO:0042493 GO:GO:0045944 GO:GO:0007243 GO:GO:0006351
EMBL:CH471088 GO:GO:0000902 Orphanet:3273 GO:GO:0048013
GO:GO:0005881 GO:GO:0030374 HOVERGEN:HBG003892 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 UniGene:Hs.129261 EMBL:X79200
EMBL:S79894 EMBL:X79201 EMBL:AF343880 EMBL:EF445031 EMBL:BC096223
IPI:IPI00452919 IPI:IPI00940186 PIR:S46269 RefSeq:NP_001007560.1
RefSeq:NP_005628.2 ProteinModelPortal:Q15532 IntAct:Q15532
STRING:Q15532 PhosphoSite:Q15532 DMDM:20141795 PaxDb:Q15532
PRIDE:Q15532 DNASU:6760 Ensembl:ENST00000269137
Ensembl:ENST00000415083 GeneID:6760 KEGG:hsa:6760 UCSC:uc002kvm.3
CTD:6760 GeneCards:GC18M023596 HGNC:HGNC:11340 MIM:600192
neXtProt:NX_Q15532 PharmGKB:PA36164 eggNOG:NOG274014
InParanoid:Q15532 KO:K15623 OrthoDB:EOG4RFKTH PhylomeDB:Q15532
ChiTaRS:SS18 GenomeRNAi:6760 NextBio:26388 ArrayExpress:Q15532
Bgee:Q15532 CleanEx:HS_SS18 Genevestigator:Q15532
GermOnline:ENSG00000141380 Uniprot:Q15532
Length = 418
Score = 155 (59.6 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 63/172 (36%), Positives = 70/172 (40%)
Query: 411 YSYS-QPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
YS+ Q P G NQQ Y D + Y GY Q P +QGY+ Y + +
Sbjct: 275 YSHGGQGPPEGMNQQ---YYPDGHNDY-----GYQQ--PSYPEQGYDRP--YEDSSQHYY 322
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
EG YG Q D+ Q PPP QQGY QQ P YP Q Q YG P S
Sbjct: 323 EGGNSQYGQQQDAYQGPPP--------QQGYPPQQQQYPGQQGYPGQ---QQGYG--P-S 368
Query: 530 QSGYGSQVP--PQS-G--YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ 576
Q G G Q P PQ G Y GY Q P PP G G Y Q
Sbjct: 369 QGGPGPQYPNYPQGQGQQYGGYRPTQPGPP--QPPQQRPYGYDQGQYGNYQQ 418
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 54/193 (27%), Positives = 64/193 (33%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP +N G H GQ + N+ N+S + S
Sbjct: 97 PPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSS 156
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-----PSPNTASYPPQGAT---QP---SYG 524
+G+ G + P QS Q GQ P PN + P QG QP Y
Sbjct: 157 HGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYN 216
Query: 525 VPPTSQSGYGSQVPPQS--GYAGYG---MPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
+P Y Q PP G G M Q Q P PP G QQ G YG Y
Sbjct: 217 MPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-Y 275
Query: 580 SHS-QPPPSSYAQ 591
SH Q PP Q
Sbjct: 276 SHGGQGPPEGMNQ 288
Score = 119 (46.9 bits), Expect = 0.00059, P = 0.00058
Identities = 64/218 (29%), Positives = 73/218 (33%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE-- 470
+ QPP+ YN QG Q Y G P GQ + G Y +
Sbjct: 207 HQQPPSQQYNMP-QGGGQH-YQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQY 264
Query: 471 -GHTPSYGAQ-GDSTQAPPPVQSSAAM--GQQGYGTGQQPSPNTASYPPQGATQP----S 522
G YG Q Q PP + G YG QQPS YP QG +P S
Sbjct: 265 SGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY-QQPS-----YPEQGYDRPYEDSS 318
Query: 523 YGVPPTSQSGYGSQV------PPQSGYAGYGM--PQAQKPLANPPAYGQTQQSPGSA--- 571
S YG Q PPQ GY P Q YG +Q PG
Sbjct: 319 QHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPN 378
Query: 572 --GGYGQP--GYSHSQP-PPSSYAQPDSGSQRAPPSNY 604
G GQ GY +QP PP Q G + NY
Sbjct: 379 YPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNY 416
Score = 56 (24.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 21/58 (36%), Positives = 26/58 (44%)
Query: 312 QARPPTSWGTPGAPSMQ-QPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPG 368
Q +P ++G P P+M QP G + P Q QYNM Q Y Q P G G
Sbjct: 183 QGQPMGNYG-P-RPNMSMQPNQGPMMHQQPPSQ--QYNMPQGGGQHYQGQQPPMGMMG 236
>UNIPROTKB|F1NVW3 [details] [associations]
symbol:IGF2BP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0044430 "cytoskeletal part" evidence=IEA] [GO:0048027 "mRNA
5'-UTR binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048027 GO:GO:0003730 GeneTree:ENSGT00530000063171
GO:GO:0044430 OMA:KQQEQKH EMBL:AADN02024285 EMBL:AADN02024286
IPI:IPI00581668 Ensembl:ENSGALT00000022629 Uniprot:F1NVW3
Length = 573
Score = 169 (64.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 71/247 (28%), Positives = 117/247 (47%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
+P VG IIGK G TIK L Q+ +K+ + R A + + + + TPE ++A ++
Sbjct: 173 VPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSEACRM 230
Query: 195 INDVLA-EAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTG 251
I D++ EA+ S ++ +KI N+ VG +IGK G +K ++ TG
Sbjct: 231 ILDIMQKEADETKS------------AEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTG 278
Query: 252 ARIQVIPLHLPPGDTSTERTVQIDGTSE-----QIESAKQL----VNEVISENRIRN--P 300
+I + PL + ERT+ + G++E ++E K+L N++++ N+ N P
Sbjct: 279 TKITISPLQ-DLTIYNPERTITVKGSTEACSNAEVEIMKKLREAYENDIVAVNQQANLIP 337
Query: 301 AM---AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
+ A G G P +S G GA + P + + AY + Y S P G +
Sbjct: 338 GLNLSALGIFSTGLSMLP-SSAGARGAAAAA-PYHPFASSSAY--LSGLYGAS--PVGAF 391
Query: 358 PSQ-PTP 363
P Q P P
Sbjct: 392 PHQHPLP 398
Score = 149 (57.5 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 53/171 (30%), Positives = 83/171 (48%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
IP VG IIGK G+ IK L +GA I++ D R V + G PE KA+
Sbjct: 407 IPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATE--RMVIITGPPEAQFKAQGR 464
Query: 195 INDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
I L E E+ + +L H +K+P+ G VIGKGG+T+ +Q T A +
Sbjct: 465 IFGKLKE-ENFFNPKEEVKLEA-----H--IKVPSFAAGRVIGKGGKTVNELQNLTSAEV 516
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGG 305
++P P D + E V+I G ++A++ + E++ + + + A G
Sbjct: 517 -IVPRDQTP-DENEEVIVKIIGHFFASQTAQRKIREIVQQVKQQEQKHAQG 565
>UNIPROTKB|A4RD35 [details] [associations]
symbol:SEC31 "Protein transport protein SEC31"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 EMBL:CM001235
GO:GO:0015031 eggNOG:COG2319 KO:K14005 InterPro:IPR009917
Pfam:PF07304 OrthoDB:EOG4RR9RS RefSeq:XP_003717826.1
ProteinModelPortal:A4RD35 STRING:A4RD35 EnsemblFungi:MGG_01108T0
GeneID:2674815 KEGG:mgr:MGG_01108 Uniprot:A4RD35
Length = 1269
Score = 138 (53.6 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 52/151 (34%), Positives = 68/151 (45%)
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASY----PPQGATQPS--YGVP 526
+P G +G +T PPP + A G + SP A Y PP+ A+ S Y P
Sbjct: 963 SPYLGQRGTATPPPPPPK--AGQGPPRMAS-PLTSPPQAGYGGAAPPRPASAASSTYAPP 1019
Query: 527 PTSQS-GYGSQVPPQSGYAGYGMPQAQKPLAN---P-PAYGQTQQSPGSAGGYGQPGYSH 581
P + +G PP + Y + A P +N P PA Q Q PG AG P +
Sbjct: 1020 PPAPGQSFGMNAPPARTASPYSVAPAAPPPSNRYAPSPAMQQQQGGPGPAGSMPPPP-AM 1078
Query: 582 SQPPPSS-YA-----QPDSGSQRAPPSNYGA 606
S+PPP++ YA P G Q AP S YGA
Sbjct: 1079 SRPPPTNPYAAAPQQSPAPGGQYAP-SPYGA 1108
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 59/180 (32%), Positives = 70/180 (38%)
Query: 439 PQSGYGQAAPYDQQQGYNS-------AAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQS 491
PQ+GYG AAP +S A G N Y + APPP
Sbjct: 996 PQAGYGGAAPPRPASAASSTYAPPPPAPGQSFGMNAPPARTASPYSV---APAAPPPSNR 1052
Query: 492 ---SAAMGQQ--GYG-TGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAG 545
S AM QQ G G G P P S PP T P Y P G Q P
Sbjct: 1053 YAPSPAMQQQQGGPGPAGSMPPPPAMSRPPP--TNP-YAAAPQQSPAPGGQYAPSP---- 1105
Query: 546 YGMP-QA-QKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSN 603
YG P QA Q P+A PP+ Q PG G P + PPP + A P + + + PP +
Sbjct: 1106 YGAPPQAGQPPMAPPPS-SQVGPPPGGRGPLSTP----TPPPPRAAAAPPAKT-KYPPGD 1159
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 63/222 (28%), Positives = 85/222 (38%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQ--QQG-YNSAAGYGNV---- 464
+Y P GY Q Q ++G P++ A P + G +N
Sbjct: 883 AYGPTPGVGYGQP-----QQNFGAPPPPRNATPSALPPSRTVDAGSWNDVPMVTKAPPPR 937
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGAT----- 519
+T PS A + APPP S +GQ+G T P P PP+ A+
Sbjct: 938 RSTPSVAPVPSPFANQQAGMAPPP--QSPYLGQRGTATPPPPPPKAGQGPPRMASPLTSP 995
Query: 520 -QPSYG--VPPTSQSGYGSQV--PPQSGYAGYGM--PQAQ--KPL----ANPPAYGQTQQ 566
Q YG PP S S PP + +GM P A+ P A PP +
Sbjct: 996 PQAGYGGAAPPRPASAASSTYAPPPPAPGQSFGMNAPPARTASPYSVAPAAPPPSNRYAP 1055
Query: 567 SPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSN-YGAA 607
SP G PG + S PPP + ++P PP+N Y AA
Sbjct: 1056 SPAMQQQQGGPGPAGSMPPPPAMSRP-------PPTNPYAAA 1090
Score = 113 (44.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 47/160 (29%), Positives = 59/160 (36%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEG 471
+Y+ PP + GQ + ++ A AAP + S A G
Sbjct: 1015 TYAPPPPA----PGQSFGMNAPPARTASPYSVAPAAPPPSNRYAPSPAMQQQQGGPGPAG 1070
Query: 472 HTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS 531
P A PPP AA QQ G Q +P+ PPQ A QP PP+SQ
Sbjct: 1071 SMPPPPAMS----RPPPTNPYAAAPQQSPAPGGQYAPSPYGAPPQ-AGQPPMAPPPSSQV 1125
Query: 532 GYGSQVPPQSGYAGYGMPQAQKP--LANPPAYGQTQQSPG 569
G PP G P P A PPA +T+ PG
Sbjct: 1126 G-----PPPGGRGPLSTPTPPPPRAAAAPPA--KTKYPPG 1158
Score = 106 (42.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 56/205 (27%), Positives = 70/205 (34%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEG 471
S + P+ NQQ G A Y Q G P + G + + Q G
Sbjct: 942 SVAPVPSPFANQQA-GMAPPPQSPYLG-QRGTATPPPPPPKAGQGPPRMASPLTSPPQAG 999
Query: 472 H----TPSYGAQGDSTQAPPPVQSSAAMGQQG--------YGTGQQPSPNTASYPPQGAT 519
+ P + ST APPP + G Y P + Y P A
Sbjct: 1000 YGGAAPPRPASAASSTYAPPPPAPGQSFGMNAPPARTASPYSVAPAAPPPSNRYAPSPAM 1059
Query: 520 QPSYGVPPTSQSGYGSQVPPQS-GYAGYGMPQAQKPLANPPAYGQTQQSP-GSAGGYGQP 577
Q G P + GS PP + P A P +P GQ SP G+ GQP
Sbjct: 1060 QQQQGGPGPA----GSMPPPPAMSRPPPTNPYAAAPQQSPAPGGQYAPSPYGAPPQAGQP 1115
Query: 578 GYSHSQPPPSSYAQPDSGSQRAPPS 602
+ PPPSS P G R P S
Sbjct: 1116 PMA---PPPSSQVGPPPGG-RGPLS 1136
Score = 86 (35.3 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 36/126 (28%), Positives = 54/126 (42%)
Query: 254 IQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQA 313
++++P + + +R +Q+ T + A + + R+ GY Q Q
Sbjct: 770 LELVPASYSGAEVARKR-LQLATTKSGAQPAAARAQQAPAAARLPTRQQPVGY--QPPQQ 826
Query: 314 RP-PTSWGTPGAPSMQQPG---YG------YVQPGAYPGQTPQYNMSQP-PYGGYPSQ-P 361
+P T +G P AP Q P YG Y GA P Q Q + + P P GG + P
Sbjct: 827 QPMSTPYGMPPAPQAQTPAANPYGPPAPSPYAPAGATPYQPQQTSYAPPQPAGGAGAYGP 886
Query: 362 TPG-GY 366
TPG GY
Sbjct: 887 TPGVGY 892
Score = 60 (26.2 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 20/68 (29%), Positives = 26/68 (38%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPS 359
P + G QQ + A PP TP A P V G++ P + PP PS
Sbjct: 888 PGVGYGQPQQNFGAPPPPRNATPSA----LPPSRTVDAGSW-NDVPMVTKAPPPRRSTPS 942
Query: 360 -QPTPGGY 366
P P +
Sbjct: 943 VAPVPSPF 950
Score = 46 (21.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 26/105 (24%), Positives = 34/105 (32%)
Query: 4 EPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVP---PPADEFQDF 60
+PQ + P R PPS + P AP S P P F +
Sbjct: 894 QPQQNFGAPPPPRNATPSALPPSRTVDAGSWNDVPMVTKAPPPRRSTPSVAPVPSPFANQ 953
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPP 105
QA Q + L +A P + G G A +SPP
Sbjct: 954 QAGMAPPPQ-SPYLGQRGTATPPPPPPKAGQGPPRMASP-LTSPP 996
Score = 40 (19.1 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 27 AAARRPT-----GFSAPDPAVAPTSYNSVPPP 53
AAAR PT G+ P T Y P P
Sbjct: 808 AAARLPTRQQPVGYQPPQQQPMSTPYGMPPAP 839
>UNIPROTKB|I3L8Y8 [details] [associations]
symbol:ATN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0050827 "toxin receptor binding" evidence=IEA] [GO:0030011
"maintenance of cell polarity" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0009404 "toxin metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
GO:GO:0005737 GO:GO:0003714 GO:GO:0016477 GO:GO:0051402
GO:GO:0000122 GO:GO:0016363 GO:GO:0009404 KO:K05626 OMA:ATFPHVT
GO:GO:0030011 InterPro:IPR017993 InterPro:IPR002951 Pfam:PF03154
PRINTS:PR01222 GeneTree:ENSGT00580000081398 EMBL:FP325257
RefSeq:XP_003126588.2 Ensembl:ENSSSCT00000028309 GeneID:100153709
KEGG:ssc:100153709 Uniprot:I3L8Y8
Length = 1182
Score = 146 (56.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 67/215 (31%), Positives = 82/215 (38%)
Query: 410 GYSYSQPPASGYN---QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNS---AAGY-- 461
G S + PPA ++ QQ Q Q H SG Y NS A Y
Sbjct: 466 GQSTAHPPAPAHHHHHQQQQQQQQQQQQQQHHGSSGPPPPGAYPHSLESNSSHHAHPYAM 525
Query: 462 ----GNVNNTSQ-EGHTPSYGAQGDSTQA-P--PPVQSSA--AMGQQGYGTGQQPSPNTA 511
G++ H P +Q +QA P PP SS+ + QG PSP
Sbjct: 526 SPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPASSSSNSSSSSQGSYPCSHPSP--- 582
Query: 512 SYPPQGATQPSYGVPP-TSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGS 570
S PQGA P VPP T+ S S V + G A P PP YG+ SPG+
Sbjct: 583 SQGPQGAPYPFPSVPPVTTSSATLSTVIATVASSPAGYKTASPP--GPPPYGKRAPSPGA 640
Query: 571 AGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
PGY PP A P S +PP+ G
Sbjct: 641 YKTATPPGYKPGSPPSFRTATPPSYRGASPPAGPG 675
Score = 118 (46.6 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 52/176 (29%), Positives = 68/176 (38%)
Query: 434 GGYHAP----QSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAP--P 487
G H P Q Y QA P +S + + + +PS G QG P P
Sbjct: 538 GPAHLPPPHSQVSYSQAGPNGPPASSSSNSSSSSQGSYPCSHPSPSQGPQGAPYPFPSVP 597
Query: 488 PVQSSAAMGQQGYGT-GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGY 546
PV +S+A T P+ + PP G P YG S Y + PP GY
Sbjct: 598 PVTTSSATLSTVIATVASSPAGYKTASPP-GP--PPYGKRAPSPGAYKTATPP--GYKP- 651
Query: 547 GMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPS 602
G P + + A PP+Y SP + G +PG P P A P S PP+
Sbjct: 652 GSPPSFRT-ATPPSYRGA--SPPAGPGTFKPGSPAVGPGPLPPAGPSGLSSLPPPT 704
Score = 96 (38.9 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 46/143 (32%), Positives = 59/143 (41%)
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY 523
+NN S P GAQ P + S +MGQ G G G P P P A P +
Sbjct: 311 LNNASAS--PPGLGAQ----PLPGHLPSPHSMGQ-GMG-GLPPGPEKG---PTLAPSP-H 358
Query: 524 GVPPTSQSGYGSQVPPQS-GYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHS 582
+PP S S + PP Y+ G A A+ + Q P S P Y HS
Sbjct: 359 PLPPASSSS--APAPPMRYPYSSSGSSAA----ASSSSSASVSQYPASQA---LPSYPHS 409
Query: 583 QPPPSSYA---QPDSGSQRAPPS 602
PPP+S + QP +Q + PS
Sbjct: 410 FPPPTSLSVSNQPPKYTQPSLPS 432
Score = 77 (32.2 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 35/120 (29%), Positives = 50/120 (41%)
Query: 24 PPSAAARRPT-GFSAPDPAVAPTSYNS-VPPPADEFQDFQAAKRRAEQIAARLCNSVSAE 81
PP + R+P GF P P+V PT Y++ + PP FQA A +L +
Sbjct: 171 PPDSTPRQPEPGFE-PHPSVTPTGYHAPMEPPTSRM--FQAPPG-APPPHPQLYPGGTGG 226
Query: 82 AKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVG 141
GS G +A + PS K P P+ P+S + G + + PN VG
Sbjct: 227 GVLSGPPMGSKGGGAASSAVA--PSGGKQHPPPTT-PISISS-SAAGGAPPTKPPNTPVG 282
Score = 69 (29.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 34/119 (28%), Positives = 51/119 (42%)
Query: 265 DTSTERTVQIDGTSE--QIESAKQLVN-EVISENRIRNPA-MAGGYSQ---QGYQARP-- 315
D+ R++ DG+S+ I+ + + + S + N + + G SQ + Y P
Sbjct: 106 DSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLF 165
Query: 316 PTSWGTPGA-PSMQQPGYG---YVQPGAY--PGQTPQYNMSQPPYGGYPSQPTPGGYPG 368
P S P + P +PG+ V P Y P + P M Q P G P P P YPG
Sbjct: 166 PPSPPPPDSTPRQPEPGFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPP--PHPQLYPG 222
Score = 60 (26.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 34/121 (28%), Positives = 46/121 (38%)
Query: 24 PPSAAARRPTGF----SAPDPAVAP-TSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSV 78
PP+ P G +AP PA P + N PPPA + A + A+ +
Sbjct: 272 PPTKPPNTPVGGGNLPTAPPPATFPHVTPNLPPPPA--LRPLNNASASPPGLGAQ---PL 326
Query: 79 SAEAKRPR-VENGSGGFDSA-DKG-------FSSPPSDLKSIPAPSAIPVSYGGYQSMGT 129
P + G GG +KG PP+ S PAP P+ Y Y S G+
Sbjct: 327 PGHLPSPHSMGQGMGGLPPGPEKGPTLAPSPHPLPPASSSSAPAP---PMRYP-YSSSGS 382
Query: 130 S 130
S
Sbjct: 383 S 383
Score = 54 (24.1 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 21/51 (41%), Positives = 23/51 (45%)
Query: 310 GYQA--RPPTS---WGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG 355
GY A PPTS PGAP P + P YPG T +S PP G
Sbjct: 193 GYHAPMEPPTSRMFQAPPGAP----PPH----PQLYPGGTGGGVLSGPPMG 235
Score = 47 (21.6 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 17/69 (24%), Positives = 27/69 (39%)
Query: 5 PQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSA---PDPAVAPTSYNSVPP-PADEFQDF 60
P+Y+ PS+ + PP R +A P P A + PP PA
Sbjct: 423 PKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSAGGQSTAHPPAPAHHHHHQ 482
Query: 61 QAAKRRAEQ 69
Q +++ +Q
Sbjct: 483 QQQQQQQQQ 491
>CGD|CAL0001510 [details] [associations]
symbol:PBP2 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0010834 "telomere maintenance via
telomere shortening" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 CGD:CAL0001510 GO:GO:0003723
EMBL:AACQ01000046 EMBL:AACQ01000047 eggNOG:NOG315872
RefSeq:XP_718039.1 RefSeq:XP_718106.1 ProteinModelPortal:Q5A8H8
STRING:Q5A8H8 GeneID:3640267 GeneID:3640340 KEGG:cal:CaO19.13193
KEGG:cal:CaO19.5771 HOGENOM:HOG000247928 Uniprot:Q5A8H8
Length = 529
Score = 167 (63.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 57/220 (25%), Positives = 100/220 (45%)
Query: 136 PNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLI 195
P I+G+ GETI +L+ ++ +I V+ + + P R V + G E +A+A LI
Sbjct: 167 PVKEASTIVGRKGETINHLREKANVRITVSENLKG---VPERIVAVKGPAENVARAFGLI 223
Query: 196 NDV-LAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
V L E E + I +++ + + IP+ +G +IGK G + ++ + A++
Sbjct: 224 TRVILEEPEDEPASINSQQY-------NLKLLIPHPMIGFIIGKQGLKFREIEENSAAKL 276
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENR-IRNPAMAGGYSQQGYQA 313
+ LP ST+R + + G + I A + +V+ E++ + Y+ YQ
Sbjct: 277 KAAENALP---YSTDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKHKVVLYNPANYQ- 332
Query: 314 RPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP 353
PT G Q P Y P Y + P + S+PP
Sbjct: 333 --PTDQSL-GGRQRQPPSNSYNNPMGYQAKLPPF--SKPP 367
Score = 94 (38.1 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 32/106 (30%), Positives = 54/106 (50%)
Query: 206 GSGIVARRLTG---QAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTGAR-IQVIP- 258
G+ IV +T QAG D + + N+ +G VIGK G IK+++ + +++ P
Sbjct: 422 GNTIVGEVITTPPIQAGQDKYNQDVFVANSSIGSVIGKRGNNIKHIRETSACTYVKIEPD 481
Query: 259 ----LHLPPGDTSTE-RTVQIDGTSEQIESAKQLVNEVISENRIRN 299
+ L G T R + + GT I++A L+N+ I+ +R RN
Sbjct: 482 KGQSMMLGGGKGMTNIRKLTLTGTLNSIQTAIYLINQRINADRERN 527
Score = 71 (30.1 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ +G IIGK G + ++ S AK++ + A S R + +MG + I A
Sbjct: 246 KLLIPHPMIGFIIGKQGLKFREIEENSAAKLKAAEN--ALPYSTDRVLSVMGVGDAIHIA 303
Query: 192 EQLINDVLAE 201
I V+ E
Sbjct: 304 VYYIAQVMLE 313
>UNIPROTKB|P02812 [details] [associations]
symbol:PRB2 "Basic salivary proline-rich protein 2"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] GO:GO:0005576 EMBL:AC078950
EMBL:BX484538 EMBL:S80905 EMBL:K03208 IPI:IPI00552432 PIR:B40750
PIR:E25372 UniGene:Hs.654486 STRING:P02812 DMDM:160409933
PaxDb:P02812 PRIDE:P02812 Ensembl:ENST00000389362 UCSC:uc010shk.1
GeneCards:GC12M011544 HGNC:HGNC:9338 MIM:168810 neXtProt:NX_P02812
ArrayExpress:P02812 Bgee:P02812 CleanEx:HS_PRB2
Genevestigator:P02812 GermOnline:ENSG00000173342 InterPro:IPR026086
PANTHER:PTHR23203 Uniprot:P02812
Length = 416
Score = 136 (52.9 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 60/197 (30%), Positives = 67/197 (34%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP G QG D+ G Q P QG N G Q G P
Sbjct: 153 PPPPG-KPQGPPPQGDNKSRSSRSPPGKPQGPP---PQGGNQPQGPPPPPGKPQ-GPPPQ 207
Query: 476 YGAQGDSTQAPPPV---QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG 532
G G+ Q PPP Q G + + P PPQG QP G PP
Sbjct: 208 -G--GNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQ-GPPPPPGKP 263
Query: 533 YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGG--YGQPGYSHSQP--PPSS 588
G PPQ G G P KP PP G +S S G G P +QP PP
Sbjct: 264 QGP--PPQGGNKSQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPP-- 319
Query: 589 YAQPDSGSQRAPPSNYG 605
P G + PP G
Sbjct: 320 ---PPPGKPQGPPPQGG 333
Score = 132 (51.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 42/131 (32%), Positives = 51/131 (38%)
Query: 480 GDSTQAPPPV---QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ 536
G+ +Q PPP Q G + + P PPQG QP G PP G
Sbjct: 271 GNKSQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQ-GPPPPPGKPQGP- 328
Query: 537 VPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGG--YGQP---GYSHSQPPPSSYAQ 591
PPQ G G P KP PP G +S S G G P G + PPP +
Sbjct: 329 -PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGN 387
Query: 592 PDSGSQRAPPS 602
P +APP+
Sbjct: 388 PQQ--PQAPPA 396
Score = 127 (49.8 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 59/200 (29%), Positives = 69/200 (34%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP G QG D+ G Q P QG N G Q G P
Sbjct: 215 PPPPG-KPQGPPPQGDNKSQSARSPPGKPQGPP---PQGGNQPQGPPPPPGKPQ-GPPPQ 269
Query: 476 YGAQGDSTQAPPPV---QSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSG 532
G G+ +Q PPP Q G + + P PPQG QP G PP
Sbjct: 270 -G--GNKSQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQ-GPPPPPGKP 325
Query: 533 YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGG--YGQP---GYSHSQPPPS 587
G PPQ G G P KP PP G +S S G G P G + PPP
Sbjct: 326 QGP--PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPP 383
Query: 588 SYAQPD------SGSQRAPP 601
+ P +G + PP
Sbjct: 384 AGGNPQQPQAPPAGQPQGPP 403
Score = 127 (49.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 49/147 (33%), Positives = 57/147 (38%)
Query: 463 NVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS 522
N+N + +PS A G+ APP Q G + G P PPQG QP
Sbjct: 18 NLNEDVSQEESPSLIA-GNPQGAPP--QG----GNKPQGPPSPPGKPQGP-PPQGGNQPQ 69
Query: 523 YGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGG--YGQPGYS 580
G PP G PPQ G G P KP PP G +SP S G G P
Sbjct: 70 -GPPPPPGKPQGP--PPQGGNKPQGPPPPGKP-QGPPPQGDKSRSPRSPPGKPQGPPPQG 125
Query: 581 HSQP--PPSSYAQPDSGSQRAPPSNYG 605
+QP PP P G + PP G
Sbjct: 126 GNQPQGPP-----PPPGKPQGPPPQGG 147
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 53/177 (29%), Positives = 60/177 (33%)
Query: 439 PQSG---YGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQG-DSTQAPPPVQSSAA 494
PQ G G +P + QG G G QG + Q PPP
Sbjct: 41 PQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 100
Query: 495 MGQQGYGTGQQPSP--NTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQ 552
QG + SP PPQG QP G PP G PPQ G G P
Sbjct: 101 PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQ-GPPPPPGKPQGP--PPQGGNKPQGPPPPG 157
Query: 553 KPLANPPAYGQTQQSPGSAGG--YGQPGYSHSQP--PPSSYAQPDSGSQRAPPSNYG 605
KP PP +S S G G P +QP PP P G + PP G
Sbjct: 158 KPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPP-----PPPGKPQGPPPQGG 209
Score = 73 (30.8 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 27/88 (30%), Positives = 34/88 (38%)
Query: 283 SAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQ--PGYGYVQPGAY 340
S+ Q +NE +S+ +P++ G Q G P P Q P G QP
Sbjct: 14 SSAQNLNEDVSQEE--SPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQG- 70
Query: 341 PGQTPQYNMSQPPYGGY-PSQPTPGGYP 367
P P PP GG P P P G P
Sbjct: 71 PPPPPGKPQGPPPQGGNKPQGPPPPGKP 98
Score = 72 (30.4 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 25/69 (36%), Positives = 27/69 (39%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY-P 358
P G QG ++R P S PG P P G QP P P PP GG P
Sbjct: 95 PGKPQGPPPQGDKSRSPRS--PPGKPQGPPPQGGN-QPQG-PPPPPGKPQGPPPQGGNKP 150
Query: 359 SQPTPGGYP 367
P P G P
Sbjct: 151 QGPPPPGKP 159
Score = 61 (26.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 23/69 (33%), Positives = 26/69 (37%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPS 359
P G QG + ++ PG P P G QP P P PP GG S
Sbjct: 218 PGKPQGPPPQG-DNKSQSARSPPGKPQGPPPQGGN-QPQG-PPPPPGKPQGPPPQGGNKS 274
Query: 360 Q-PTPGGYP 367
Q P P G P
Sbjct: 275 QGPPPPGKP 283
Score = 59 (25.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 26/72 (36%), Positives = 29/72 (40%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
+ P GG QG PP G P P Q G P + PG+ PQ PP GG
Sbjct: 79 QGPPPQGGNKPQG----PPPP-GKPQGPPPQ--GDKSRSPRSPPGK-PQ---GPPPQGGN 127
Query: 358 PSQ--PTPGGYP 367
Q P P G P
Sbjct: 128 QPQGPPPPPGKP 139
Score = 56 (24.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/78 (34%), Positives = 28/78 (35%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQ---PGAYPGQTPQY-NMSQ-- 351
+ P GG QG PP G P P Q PG G PQ N Q
Sbjct: 202 QGPPPQGGNKPQG----PPPP-GKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGP 256
Query: 352 PPYGGYPSQPTPGGYPGN 369
PP G P P P G GN
Sbjct: 257 PPPPGKPQGPPPQG--GN 272
Score = 56 (24.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/78 (34%), Positives = 28/78 (35%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQ---PGAYPGQTPQY-NMSQ-- 351
+ P GG QG PP G P P Q PG G PQ N Q
Sbjct: 140 QGPPPQGGNKPQG----PPPP-GKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGP 194
Query: 352 PPYGGYPSQPTPGGYPGN 369
PP G P P P G GN
Sbjct: 195 PPPPGKPQGPPPQG--GN 210
Score = 51 (23.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 23/72 (31%), Positives = 26/72 (36%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
+ P GG QG PP PG P P G G P PQ PP G
Sbjct: 119 QGPPPQGGNQPQG----PPPP---PGKPQGPPPQGGNKPQGPPPPGKPQ---GPPPQGDN 168
Query: 358 PSQPT--PGGYP 367
S+ + P G P
Sbjct: 169 KSRSSRSPPGKP 180
>UNIPROTKB|F1NK13 [details] [associations]
symbol:SS18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IEA] GO:GO:0000226
GO:GO:0042493 GO:GO:0045944 GO:GO:0007243 GO:GO:0048013
GO:GO:0005881 GO:GO:0030374 GeneTree:ENSGT00500000044808
InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030 OMA:IQCIMDS
EMBL:AADN02021370 EMBL:AADN02021371 IPI:IPI00822142
Ensembl:ENSGALT00000024397 ArrayExpress:F1NK13 Uniprot:F1NK13
Length = 420
Score = 147 (56.8 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 62/172 (36%), Positives = 69/172 (40%)
Query: 411 YSYS-QPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
YS+ Q P G NQQ Y D + Y GY Q P +QGY+ Y + +
Sbjct: 277 YSHGGQGPPEGMNQQ---YYPDGHNDY-----GYQQ--PSYPEQGYDRP--YEDSSQHYY 324
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
EG YG Q D+ Q PP QQGY QQ P YP Q Q YG P S
Sbjct: 325 EGGNSQYGQQQDAYQGPPQ--------QQGYPPQQQQYPGQQGYPGQ---QQGYG--P-S 370
Query: 530 QSGYGSQVP--PQS-G--YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ 576
Q G G Q P PQ G Y GY Q P PP G G Y Q
Sbjct: 371 QGGPGPQYPNYPQGQGQQYGGYRPTQPGPP--QPPQQRPYGYDQGQYGNYQQ 420
Score = 136 (52.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 63/189 (33%), Positives = 73/189 (38%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PPA + Q Q Q G H P G G P +Q NS+ N+ ++S G
Sbjct: 115 PPAP--HMQNQMNGQMPEGPNHMPMQGPG---P-NQLNMTNSSM---NMPSSSH-GSMGG 164
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-PSPNTASYPPQGAT---QP---SYGVPPT 528
Y S+Q+ P VQ+ M Q G G P PN P QG QP Y +P
Sbjct: 165 YNHSVPSSQSMP-VQNQMTMSQ-GQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQA 222
Query: 529 SQSGYGSQVPPQS--GYAGYG---MPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHS- 582
Y Q PP G G M Q Q P PP G QQ G YG YSH
Sbjct: 223 GGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-YSHGG 281
Query: 583 QPPPSSYAQ 591
Q PP Q
Sbjct: 282 QGPPEGMNQ 290
Score = 117 (46.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 60/195 (30%), Positives = 67/195 (34%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE-- 470
+ QPP+ YN G Q Y G P GQ + G Y +
Sbjct: 209 HQQPPSQQYNMPQAG-GQH-YQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQY 266
Query: 471 -GHTPSYGAQ-GDSTQAPPPVQSSAAM--GQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
G YG Q Q PP + G YG QQPS YP QG +P
Sbjct: 267 SGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY-QQPS-----YPEQGYDRPYEDSS 320
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP-GYSHSQ-- 583
G SQ Q A G PQ Q PP Q QQ PG G GQ GY SQ
Sbjct: 321 QHYYEGGNSQYGQQQD-AYQGPPQQQ---GYPP---QQQQYPGQQGYPGQQQGYGPSQGG 373
Query: 584 PPPSSYAQPDSGSQR 598
P P P Q+
Sbjct: 374 PGPQYPNYPQGQGQQ 388
Score = 114 (45.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 54/202 (26%), Positives = 63/202 (31%)
Query: 411 YSYSQPPASGYNQQGQG---YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNT 467
Y QPP Q QG Q Y PQ G Q Y Q+ Y Y +
Sbjct: 227 YQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQ--YSGQEDYYGDQ-YSHGGQG 283
Query: 468 SQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPN---TASYPPQGATQPSYG 524
EG Y G + + +QGY + S G Q +Y
Sbjct: 284 PPEGMNQQYYPDGHNDYG----YQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQ 339
Query: 525 VPPTSQSGYGSQVPPQSGYAGY-GMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
PP Q GY Q G GY G Q P P G YG GY +Q
Sbjct: 340 GPP-QQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYG--GYRPTQ 396
Query: 584 P-PPSSYAQPDSGSQRAPPSNY 604
P PP Q G + NY
Sbjct: 397 PGPPQPPQQRPYGYDQGQYGNY 418
Score = 61 (26.5 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 38/140 (27%), Positives = 52/140 (37%)
Query: 233 GLVIGKGGETIKNMQARTGARIQVIPLHLP---PGDTSTERTVQIDGTSEQIESAKQLVN 289
GLV G GG +MQ + ++ P H+P PG T + N
Sbjct: 109 GLV-G-GGPPAPHMQNQMNGQMPEGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYN 166
Query: 290 EVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQ-QPGYGYVQPGAYPGQTPQYN 348
+ ++ P QG +P ++G P P+M QP G + P Q QYN
Sbjct: 167 HSVPSSQSM-PVQNQMTMSQG---QPMGNYG-P-RPNMNMQPNQGPMMHQQPPSQ--QYN 218
Query: 349 MSQPPYGGYPSQPTPGGYPG 368
M Q Y Q P G G
Sbjct: 219 MPQAGGQHYQGQQPPMGMMG 238
>UNIPROTKB|F1MPB2 [details] [associations]
symbol:IGF2BP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048027 GO:GO:0003730
KO:K13197 GeneTree:ENSGT00530000063171 CTD:10643 OMA:EAQDTKF
EMBL:DAAA02010222 IPI:IPI00712553 RefSeq:NP_001179217.1
UniGene:Bt.80827 PRIDE:F1MPB2 Ensembl:ENSBTAT00000025854
GeneID:539650 KEGG:bta:539650 NextBio:20878131 Uniprot:F1MPB2
Length = 580
Score = 169 (64.5 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 59/199 (29%), Positives = 99/199 (49%)
Query: 114 PSAIPVSYGGYQSMGTSKKIE--IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEAD 171
PSAI Y ++ ++ + IP + VG IIGK G+ IK L +GA I++ EA
Sbjct: 390 PSAITPPYPQFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIA-PAEAP 448
Query: 172 LNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNK 231
++ R V + G PE KA+ I + E E+ S +L H +++P+
Sbjct: 449 -DAKVRMVIITGPPEAQFKAQGRIYGKIKE-ENFVSPKEEVKLEA-----H--IRVPSFA 499
Query: 232 VGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEV 291
G VIGKGG+T+ +Q + A + V+P P D + + V+I G + A++ + E+
Sbjct: 500 AGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP-DENDQVVVKITGHFYACQVAQRKIQEI 557
Query: 292 ISE--NRIRNPAMAGGYSQ 308
+++ + A+ G SQ
Sbjct: 558 LTQVKQHQQQKALQSGPSQ 576
Score = 146 (56.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 61/214 (28%), Positives = 98/214 (45%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
++ +P VG IIGK G TI+ + Q+ +KI V R A + +S+ ++ TPE + A
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPEGTSAA 256
Query: 192 EQLINDVL-AEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQA 248
+ I +++ EA+ + T + +KI NN VG +IGK G +K ++
Sbjct: 257 CKSILEIMHKEAQD-------IKFT-----EEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE---NRIRNPAMAG- 304
T +I + PL + ERT+ + G E A++ + + I E N I + +
Sbjct: 305 DTDTKITISPLQ-ELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAH 363
Query: 305 ---GYSQQGYQARPPTSWGTP---GAPSMQQPGY 332
G + PPTS P G PS P Y
Sbjct: 364 LIPGLNLNALGLFPPTSGMPPPTSGPPSAITPPY 397
Score = 42 (19.8 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 105 PSDLKSIPAPSAIPVS 120
PSDL+S+ + IPVS
Sbjct: 15 PSDLESVFKDAKIPVS 30
>FB|FBgn0034011 [details] [associations]
symbol:CG8160 species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=IDA] EMBL:AE013599
GO:GO:0005576 GeneTree:ENSGT00530000063105 EMBL:AY071177
RefSeq:NP_611031.3 UniGene:Dm.6074 EnsemblMetazoa:FBtr0087389
GeneID:36701 KEGG:dme:Dmel_CG8160 UCSC:CG8160-RA
FlyBase:FBgn0034011 eggNOG:NOG271935 OMA:HENCNHE OrthoDB:EOG4M0CJN
ChiTaRS:CG8160 GenomeRNAi:36701 NextBio:799952 Uniprot:Q8SZ23
Length = 212
Score = 150 (57.9 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 57/176 (32%), Positives = 74/176 (42%)
Query: 429 AQDSYGGYHAPQSGYGQAAPYDQQQGYNSA-AGYG-NVNNTSQEGHTPSYGAQGDSTQAP 486
A+ Y G Q G ++ P Q GY S+ +GYG + + + Q G+ G G
Sbjct: 16 ARPGYDGAATAQWGL-RSVPQSGQSGYGSSPSGYGGSASQSGQGGYGGGQGGYGGGQGGY 74
Query: 487 PPVQSSAAMGQQGYGTGQ----QPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSG 542
Q GQ GYG Q QP+P T G TQ YG ++Q GYG+ VPP
Sbjct: 75 GGGQGGYGGGQGGYGGVQGGYGQPAPLTEQVG-YGGTQGGYG---SAQKGYGASVPPNE- 129
Query: 543 YAGYGMPQAQKPLANPPAYGQTQQSPGSAG-GYGQPGYSHSQPPPSS-YAQPDSGS 596
+A G+ Q L YG G G G GQ GY P YA + G+
Sbjct: 130 FA-LGL-SGQGRLGG---YGNATPQSGKLGYGGGQGGYRRPAPQSGQLYAAGELGA 180
Score = 114 (45.2 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 39/112 (34%), Positives = 47/112 (41%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGG----YHAPQSGYGQAAPYDQQQGYNSA-AGYGNV 464
GY Q G Q G G Q YGG Y Q GYGQ AP +Q GY GYG+
Sbjct: 59 GYGGGQGGYGG-GQGGYGGGQGGYGGGQGGYGGVQGGYGQPAPLTEQVGYGGTQGGYGSA 117
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAA--MGQQGYGTGQ----QPSPNT 510
P+ A G S Q +A G+ GYG GQ +P+P +
Sbjct: 118 QKGYGASVPPNEFALGLSGQGRLGGYGNATPQSGKLGYGGGQGGYRRPAPQS 169
Score = 75 (31.5 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 22/62 (35%), Positives = 24/62 (38%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGY 366
++ GY WG P Q GYG P Y G Q Q YGG Q GGY
Sbjct: 16 ARPGYDGAATAQWGLRSVPQSGQSGYGS-SPSGYGGSASQ--SGQGGYGG--GQ---GGY 67
Query: 367 PG 368
G
Sbjct: 68 GG 69
>ZFIN|ZDB-GENE-000208-9 [details] [associations]
symbol:cmn "calymmin" species:7955 "Danio rerio"
[GO:0031012 "extracellular matrix" evidence=IDA]
ZFIN:ZDB-GENE-000208-9 GeneTree:ENSGT00690000102270 EMBL:CT954256
EMBL:CT030151 IPI:IPI00997292 Ensembl:ENSDART00000124453
ArrayExpress:E7F6W5 Bgee:E7F6W5 Uniprot:E7F6W5
Length = 1249
Score = 148 (57.2 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 63/207 (30%), Positives = 85/207 (41%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYG-QAAPYDQQQGY-NSAAGYGNVNNT 467
G + +QP +G + Q GY S GG P+ GYG A P Q N GY N T
Sbjct: 440 GGAANQP--NGGSTQNMGY---SNGGTKGPKQGYGANAGPSAGQVAKPNGYGGYPNGGAT 494
Query: 468 SQ-EGHTPSY-GAQGDSTQAPPPVQSSAAMG-QQGYGTGQQPSPNTAS-YP--PQGAT-- 519
+Q G + Y G + P A G + G +GQ PN +S Y P G T
Sbjct: 495 NQPNGGSSQYMGYPNGGAKGP-----KAGYGAKSGPSSGQVSKPNGSSQYMGYPNGGTNG 549
Query: 520 -QPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
+P YG +++ YG PQ+G+ GY A N P G +Q GG+ P
Sbjct: 550 LKPGYGAK--ARTTYGQGAKPQNGFGGYSNGGA----INQPNTGSSQYIGYPNGGFKGPL 603
Query: 579 YSHSQPPPSSYAQPDSGSQRAPPSNYG 605
P + Y P S+ +N G
Sbjct: 604 NGQGGRPYNGYGVPGYTSKGPKAANSG 630
Score = 148 (57.2 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 70/208 (33%), Positives = 83/208 (39%)
Query: 410 GYSYSQPPASGYNQQGQGYAQD-SY--GGYHAPQSGYG-QAAPYDQQQGY-NSAAGYGNV 464
GY P A NQ G Q+ Y GG P+ GYG +A P N GY N
Sbjct: 297 GYG-GYPNAGATNQPNGGPFQNMGYPNGGTKGPKPGYGAKAGPSAGHVAKPNGNGGYPNG 355
Query: 465 NNTSQE--GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPN-TASYPPQG-ATQ 520
TSQ G + G T+ P S G GQ PN YP G A Q
Sbjct: 356 GATSQHNGGSSQFMGYPNGGTKGP----KSGYGANAGPSAGQVAKPNGNGRYPIGGVANQ 411
Query: 521 PSYGVPPTSQS-GY--GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP 577
P+ G +SQ+ GY G P+ GY GY P AN P G TQ S GG P
Sbjct: 412 PNRG---SSQNMGYPNGRTKGPKQGYGGY--PNGGA--ANQPNGGSTQNMGYSNGGTKGP 464
Query: 578 GYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
+ + A P +G Q A P+ YG
Sbjct: 465 KQGYG-----ANAGPSAG-QVAKPNGYG 486
Score = 145 (56.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 64/216 (29%), Positives = 83/216 (38%)
Query: 419 SGYNQQGQGYAQDSYGGY------HAPQS---GYGQAAPYDQQQGYN---SAAGYGNVNN 466
+G GY SYGGY H + G+G + QG N S+ GN N
Sbjct: 77 NGNTNGNNGYKAPSYGGYSNLLGTHPRKGAGLGFGAGPAATKGQGSNPGGSSQYMGNTNG 136
Query: 467 TSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGY---GTGQQPSPNTASYP--PQGATQ- 520
++ G P YGAQ T Q + G GY G QP + Y P G T+
Sbjct: 137 GTK-GPKPGYGAQAGQTNG----QIAKPNGYGGYPNGGAANQPKTGFSQYMGYPNGGTKG 191
Query: 521 --PSYGVPPTSQSGYGSQVPPQSGYAGY-GMP----QAQKP--LANPPAYGQTQQSPGSA 571
P YG P G+ V P +G + Y G P + P AN A + P
Sbjct: 192 PKPGYGGYPNG----GAAVQPGTGSSQYKGFPSGGIKGPNPGFAANAGASNEKGVKPNGY 247
Query: 572 GGYGQPGYSHSQPPPSS-YAQPDSGSQRAPPSNYGA 606
GGY G ++ SS Y +G + P YGA
Sbjct: 248 GGYPNGGAANQPNGGSSHYMGYPNGGTKGPKPGYGA 283
Score = 128 (50.1 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 59/200 (29%), Positives = 77/200 (38%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGY--NSAAGYGNVNNTSQ-EGHT 473
P +G +Q +G+ GG P G+ A ++G N GY N +Q G +
Sbjct: 208 PGTGSSQY-KGFPS---GGIKGPNPGFAANAGASNEKGVKPNGYGGYPNGGAANQPNGGS 263
Query: 474 PSY-GAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNT-ASYPPQGAT-QPSYGVPPTSQ 530
Y G T+ P P + A G GQ PN YP GAT QP+ G P
Sbjct: 264 SHYMGYPNGGTKGPKPGYGANA----GPSAGQVAKPNGYGGYPNAGATNQPNGG--PFQN 317
Query: 531 SGY--GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSS 588
GY G P+ GY P A G + P GGY G + SS
Sbjct: 318 MGYPNGGTKGPKPGYGAKAGPSA----------GHVAK-PNGNGGYPNGGATSQHNGGSS 366
Query: 589 Y--AQPDSGSQRAPPSNYGA 606
P+ G+ + P S YGA
Sbjct: 367 QFMGYPNGGT-KGPKSGYGA 385
Score = 126 (49.4 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 64/208 (30%), Positives = 77/208 (37%)
Query: 410 GYSYSQPPASGYNQQGQG---YAQDSYGGYHAPQSGYG-QAAPYDQQQGY-NSAAGYGNV 464
GY P NQ G Y GG P+ GYG A P Q N GY N
Sbjct: 246 GYG-GYPNGGAANQPNGGSSHYMGYPNGGTKGPKPGYGANAGPSAGQVAKPNGYGGYPNA 304
Query: 465 NNTSQEGHTP--SYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPN-TASYPPQGATQP 521
T+Q P + G T+ P P + A G G PN YP GAT
Sbjct: 305 GATNQPNGGPFQNMGYPNGGTKGPKPGYGAKA----GPSAGHVAKPNGNGGYPNGGATSQ 360
Query: 522 SYGVPPTSQ-SGY--GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYG-QP 577
G +SQ GY G P+SGY P A + +A P G+ P GG QP
Sbjct: 361 HNG--GSSQFMGYPNGGTKGPKSGYGANAGPSAGQ-VAKPNGNGRY---P--IGGVANQP 412
Query: 578 GYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
SQ + P+ G + P YG
Sbjct: 413 NRGSSQ----NMGYPN-GRTKGPKQGYG 435
Score = 120 (47.3 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 58/209 (27%), Positives = 76/209 (36%)
Query: 410 GYSYSQPPASGY----NQQG---QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAG-- 460
GY P++G+ N G G A + G + GY + GY + AG
Sbjct: 331 GYGAKAGPSAGHVAKPNGNGGYPNGGATSQHNGGSSQFMGYPNGGTKGPKSGYGANAGPS 390
Query: 461 YGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGAT- 519
G V + G P G + SS MG G + P YP GA
Sbjct: 391 AGQVAKPNGNGRYPIGGVANQPNRG-----SSQNMGYPN-GRTKGPKQGYGGYPNGGAAN 444
Query: 520 QPSYGVPPTSQSGY--GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP 577
QP+ G T GY G P+ GY P A + +A P YG P + G QP
Sbjct: 445 QPNGG--STQNMGYSNGGTKGPKQGYGANAGPSAGQ-VAKPNGYGGY---P-NGGATNQP 497
Query: 578 GYSHSQPPPSSYAQPDSGSQRAPPSNYGA 606
SQ Y +G + P + YGA
Sbjct: 498 NGGSSQ-----YMGYPNGGAKGPKAGYGA 521
Score = 101 (40.6 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 65/212 (30%), Positives = 82/212 (38%)
Query: 417 PASGY-NQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSA--AGYGNVNNTSQEGHT 473
P GY N +G+G +Q +G A GY P QG N+ AGYG N + H
Sbjct: 869 PGFGYPNGKGEGLSQPGFG---AGIGGY----P---TQGMNNGHKAGYGGYGN-QLKNHA 917
Query: 474 PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY 533
G QG PP + Q YG G P + P G YG Y
Sbjct: 918 ---GLQG----GPPARLGTKGKSQTKYGIGGLPFGGS----PSGYQSNPYGQYGNDGQRY 966
Query: 534 GSQV--PPQSGYAGYG-MP---QA-QKPLANPPAYGQTQQSPGSAGGYGQPGYS---HSQ 583
G++ P G GYG +P QA + +A P +G + G GYG G S + Q
Sbjct: 967 GAKPYNPKAPGKYGYGSLPYNSQAFPESVARSPDFGGFPYN-GQPLGYGS-GKSTGKYGQ 1024
Query: 584 PPPSSYAQ-----PD--SGSQRAPPSNYGAAT 608
P Q PD SG +P S Y T
Sbjct: 1025 KGPQYGGQSLGHGPDAISGKYGSPESLYTPET 1056
Score = 76 (31.8 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 22/64 (34%), Positives = 27/64 (42%)
Query: 310 GYQARPPTSWGTPGAPSMQQPGYGYVQPGAYP-----GQTPQYNMSQPPYGGYPSQPTP- 363
G A+P G P A + QP G Q YP G P Y P G+ ++P
Sbjct: 290 GQVAKPNGYGGYPNAGATNQPNGGPFQNMGYPNGGTKGPKPGYGAKAGPSAGHVAKPNGN 349
Query: 364 GGYP 367
GGYP
Sbjct: 350 GGYP 353
Score = 74 (31.1 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 26/80 (32%), Positives = 33/80 (41%)
Query: 299 NPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QP---GAYP--GQTPQYNMSQP 352
N G + GY T PG + P G+V +P G YP G T Q+N
Sbjct: 308 NQPNGGPFQNMGYP-NGGTKGPKPGYGAKAGPSAGHVAKPNGNGGYPNGGATSQHNGGSS 366
Query: 353 PYGGYPSQPTPG---GYPGN 369
+ GYP+ T G GY N
Sbjct: 367 QFMGYPNGGTKGPKSGYGAN 386
Score = 74 (31.1 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 28/82 (34%), Positives = 34/82 (41%)
Query: 293 SENRIRNPAMAGGYSQQGYQARPPTSW----GTP-GAPSMQQPGYG-YVQPGAYPGQTPQ 346
+ +I P GGY G +P T + G P G +PGYG Y GA P
Sbjct: 152 TNGQIAKPNGYGGYPNGGAANQPKTGFSQYMGYPNGGTKGPKPGYGGYPNGGA--AVQPG 209
Query: 347 YNMSQPPYGGYPSQPTPGGYPG 368
SQ Y G+PS G PG
Sbjct: 210 TGSSQ--YKGFPSGGIKGPNPG 229
Score = 66 (28.3 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 22/73 (30%), Positives = 30/73 (41%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYP-----GQTPQYNMSQPPYG 355
A AG +++G +P G P + QP G YP G P Y + P
Sbjct: 232 ANAGASNEKG--VKPNGYGGYPNGGAANQPNGGSSHYMGYPNGGTKGPKPGYGANAGPSA 289
Query: 356 GYPSQPTP-GGYP 367
G ++P GGYP
Sbjct: 290 GQVAKPNGYGGYP 302
Score = 64 (27.6 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 30/74 (40%), Positives = 34/74 (45%)
Query: 304 GGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPS---- 359
GG SQ Y T+ GT G P +PGYG Q G GQ + N YGGYP+
Sbjct: 125 GGSSQ--YMGN--TNGGTKG-P---KPGYG-AQAGQTNGQIAKPN----GYGGYPNGGAA 171
Query: 360 -QPTPG-----GYP 367
QP G GYP
Sbjct: 172 NQPKTGFSQYMGYP 185
Score = 62 (26.9 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 24/68 (35%), Positives = 27/68 (39%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGY--GYVQPGAYP--GQTPQYNMSQPPYGGYPSQ 360
GY G + P +G PS Q GY G YP G T Q N GYP+
Sbjct: 268 GYPNGGTKG-PKPGYGANAGPSAGQVAKPNGY---GGYPNAGATNQPNGGPFQNMGYPNG 323
Query: 361 PTPGGYPG 368
T G PG
Sbjct: 324 GTKGPKPG 331
Score = 58 (25.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 22/68 (32%), Positives = 28/68 (41%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQ--QPGYGYVQPGAYP--GQTPQYNMSQPPYGGYPSQ 360
G+ G + P GA + + +P GY G YP G Q N Y GYP+
Sbjct: 217 GFPSGGIKGPNPGFAANAGASNEKGVKPN-GY---GGYPNGGAANQPNGGSSHYMGYPNG 272
Query: 361 PTPGGYPG 368
T G PG
Sbjct: 273 GTKGPKPG 280
Score = 58 (25.5 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 21/59 (35%), Positives = 26/59 (44%)
Query: 310 GYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPG 368
GY A+ + G P+ GYG G Q P+ SQ Y GYP+ T G PG
Sbjct: 144 GYGAQAGQTNGQIAKPN----GYGGYPNGGAANQ-PKTGFSQ--YMGYPNGGTKGPKPG 195
Score = 51 (23.0 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 19/69 (27%), Positives = 25/69 (36%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYP-----GQTPQYNMSQPPYGGYPS 359
GY G + P G P + QPG G Q +P G P + +
Sbjct: 183 GYPNGGTKGPKPGYGGYPNGGAAVQPGTGSSQYKGFPSGGIKGPNPGFAANAGASNEKGV 242
Query: 360 QPTP-GGYP 367
+P GGYP
Sbjct: 243 KPNGYGGYP 251
Score = 41 (19.5 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 91 SGGFDSADKGFSSPP--SDLKSIPAPSAIPVSYGGYQSMGTSKK 132
SGG + GF++ S+ K + P YGGY + G + +
Sbjct: 220 SGGIKGPNPGFAANAGASNEKGVK-----PNGYGGYPNGGAANQ 258
Score = 38 (18.4 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 89 NGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKK 132
N +GG G+ + A P YGGY + G + +
Sbjct: 133 NTNGGTKGPKPGYGAQAGQTNG---QIAKPNGYGGYPNGGAANQ 173
Score = 38 (18.4 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 116 AIPVSYGGYQSMGTSKK 132
A P YGGY + G + +
Sbjct: 293 AKPNGYGGYPNAGATNQ 309
Score = 37 (18.1 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 115 SAIPVSYGGYQSMGTSKKIE 134
+A P+S GGY S + ++
Sbjct: 34 NAAPISPGGYGSNNNAANLK 53
>UNIPROTKB|F1SBA6 [details] [associations]
symbol:SS18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048013 "ephrin receptor signaling pathway"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IEA]
[GO:0007243 "intracellular protein kinase cascade" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0000902
"cell morphogenesis" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] GO:GO:0000226
GO:GO:0042493 GO:GO:0045944 GO:GO:0007243 GO:GO:0000902
GO:GO:0048013 GO:GO:0005881 GO:GO:0030374
GeneTree:ENSGT00500000044808 InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 OMA:IQCIMDS EMBL:CU442718 EMBL:CU862003
Ensembl:ENSSSCT00000004116 Uniprot:F1SBA6
Length = 418
Score = 151 (58.2 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 63/168 (37%), Positives = 70/168 (41%)
Query: 411 YSYS-QPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
YS+ Q P G NQQ Y D + Y GY Q P +QGY+ Y + +
Sbjct: 275 YSHGGQGPPEGMNQQ---YYPDGHNDY-----GYQQ--PSYPEQGYDRP--YEDSSQHYY 322
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
EG YG Q D+ Q PPP QQGY QQ P YP Q Q YG P S
Sbjct: 323 EGGNSQYGQQQDAYQGPPP--------QQGYPPQQQQYPGQQGYPGQ---QQGYG--P-S 368
Query: 530 QSGYGSQVP--PQS-G--YAGYGMPQAQKPLANPPA---YGQTQQSPG 569
Q G G Q P PQ G Y GY Q P PP YG Q G
Sbjct: 369 QGGPGPQYPNYPQGQGQQYGGYRPTQPGPP--QPPQQRPYGYDQSLSG 414
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 54/193 (27%), Positives = 63/193 (32%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP +N G H GQ + N+ N+S + S
Sbjct: 97 PPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSS 156
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-----PSPNTASYPPQGAT---QP---SYG 524
+G+ G + P QS Q GQ P PN P QG QP Y
Sbjct: 157 HGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYN 216
Query: 525 VPPTSQSGYGSQVPPQS--GYAGYG---MPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
+P Y Q PP G G M Q Q P PP G QQ G YG Y
Sbjct: 217 MPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-Y 275
Query: 580 SHS-QPPPSSYAQ 591
SH Q PP Q
Sbjct: 276 SHGGQGPPEGMNQ 288
Score = 117 (46.2 bits), Expect = 0.00097, P = 0.00097
Identities = 63/200 (31%), Positives = 73/200 (36%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE-- 470
+ QPP+ YN QG Q Y G P GQ + G Y +
Sbjct: 207 HQQPPSQQYNMP-QGGGQH-YQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQY 264
Query: 471 -GHTPSYGAQ-GDSTQAPPPVQSSAAM--GQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
G YG Q Q PP + G YG QQPS YP QG +P Y
Sbjct: 265 SGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY-QQPS-----YPEQGYDRP-Y--E 315
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQA--QKPLANPPAYG---QTQQSPGSAGGYGQP-GYS 580
+SQ Y + G + YG Q Q P PP G Q QQ PG G GQ GY
Sbjct: 316 DSSQHYY------EGGNSQYGQQQDAYQGP---PPQQGYPPQQQQYPGQQGYPGQQQGYG 366
Query: 581 HSQ--PPPSSYAQPDSGSQR 598
SQ P P P Q+
Sbjct: 367 PSQGGPGPQYPNYPQGQGQQ 386
Score = 56 (24.8 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 21/58 (36%), Positives = 26/58 (44%)
Query: 312 QARPPTSWGTPGAPSMQ-QPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPG 368
Q +P ++G P P+M QP G + P Q QYNM Q Y Q P G G
Sbjct: 183 QGQPMGNYG-P-RPNMNMQPNQGPMMHQQPPSQ--QYNMPQGGGQHYQGQQPPMGMMG 236
>ASPGD|ASPL0000075803 [details] [associations]
symbol:AN4546 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IEA] [GO:0043409 "negative regulation of MAPK cascade"
evidence=IEA] [GO:0048255 "mRNA stabilization" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4Z65XM eggNOG:NOG315872 HOGENOM:HOG000184255
RefSeq:XP_662150.1 ProteinModelPortal:Q5B4I4
EnsemblFungi:CADANIAT00005892 GeneID:2872347 KEGG:ani:AN4546.2
OMA:AQANEKA Uniprot:Q5B4I4
Length = 542
Score = 161 (61.7 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 66/228 (28%), Positives = 106/228 (46%)
Query: 125 QSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGT 184
QSM T + I + + GVIIGK+G+ + L+ ++G K V++ + R + + G
Sbjct: 224 QSMLTLRAI-VSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHD---RVLTVTGA 279
Query: 185 PEQIAKAEQLINDVLAEA--ESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGET 242
A+A L+ L E + G GIV+ G+ + I +N++G +IG+ G
Sbjct: 280 LSGTARAYALVAKGLLEGAPQMGMGGIVSNN-----GTHPIRLLISHNQMGTIIGRQGLK 334
Query: 243 IKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESA-----KQLVNE------- 290
IK++Q +G R+ LP STER V++ GT E IE A K L+++
Sbjct: 335 IKHIQDASGVRMVAQKEMLPQ---STERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGT 391
Query: 291 VISENRIRNPAMAGGYSQQG-----YQARPPTSWGTPGAPSMQQPGYG 333
++ +R+ +G G Y +RP G S Q GYG
Sbjct: 392 ILYNPAVRSSVGSGSIQHNGGNSDSYNSRPYNRTGNGADFSDQSGGYG 439
Score = 97 (39.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 122 GGYQSM-GTSK-KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSV 179
GG S GT ++ I + ++G IIG+ G IK++Q SG +++ E S R V
Sbjct: 304 GGIVSNNGTHPIRLLISHNQMGTIIGRQGLKIKHIQDASG--VRMVAQKEMLPQSTERIV 361
Query: 180 ELMGTPEQIAKAEQLINDVLAEAESGGSGIV 210
E+ GTPE I KA I L + G+G +
Sbjct: 362 EVQGTPEGIEKAIWEIGKCLIDDWQRGTGTI 392
Score = 95 (38.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESA 284
+ IP + VG +IG+GG I ++ +GARI + P D + ER I G+++ E A
Sbjct: 466 ISIPADMVGCIIGRGGTKITEIRRSSGARISIAKA---PHDETGERMFTIMGSAQANEKA 522
Query: 285 KQLVNEVISENRIR 298
L+ E + + R
Sbjct: 523 LYLLYENLEAEKTR 536
Score = 49 (22.3 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 101 FSSPPS-DLKSIPAPS---AIPVSYGGYQSMGTS-----KKIEIPNIRVGVI 143
FSSPPS D S+ +PS +IP S + TS + +P+I + ++
Sbjct: 65 FSSPPSSDSSSVSSPSLFLSIPSSSFSFLLSSTSLLFLPSNLPLPSISLQIL 116
>UNIPROTKB|Q86YZ3 [details] [associations]
symbol:HRNR "Hornerin" species:9606 "Homo sapiens"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0031424
"keratinization" evidence=IEA] [GO:0001533 "cornified envelope"
evidence=IEA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] InterPro:IPR001240 InterPro:IPR001751
InterPro:IPR002048 InterPro:IPR011992 InterPro:IPR020922
PROSITE:PS00303 PROSITE:PS50222 Prosite:PS00018 GO:GO:0070062
GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0006568
eggNOG:NOG12793 GO:GO:0017111 GO:GO:0001533 GO:GO:0031424
InterPro:IPR013787 Pfam:PF01023 GO:GO:0009143 HOGENOM:HOG000112590
OrthoDB:EOG4RJG10 GO:GO:0004640 EMBL:AB104446 EMBL:BR000036
EMBL:AL589986 IPI:IPI00398625 RefSeq:NP_001009931.1
UniGene:Hs.490162 ProteinModelPortal:Q86YZ3 SMR:Q86YZ3
IntAct:Q86YZ3 MINT:MINT-2809380 STRING:Q86YZ3 PhosphoSite:Q86YZ3
DMDM:45476906 UCD-2DPAGE:Q86YZ3 PaxDb:Q86YZ3 PRIDE:Q86YZ3
Ensembl:ENST00000368801 GeneID:388697 KEGG:hsa:388697
UCSC:uc001ezt.1 CTD:388697 GeneCards:GC01M152184 H-InvDB:HIX0200013
HGNC:HGNC:20846 HPA:HPA031469 neXtProt:NX_Q86YZ3
PharmGKB:PA134936141 InParanoid:Q86YZ3 OMA:NNYAIDS
GenomeRNAi:388697 NextBio:102292 ArrayExpress:Q86YZ3 Bgee:Q86YZ3
CleanEx:HS_HRNR Genevestigator:Q86YZ3 GermOnline:ENSG00000197915
Uniprot:Q86YZ3
Length = 2850
Score = 173 (66.0 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 78/324 (24%), Positives = 115/324 (35%)
Query: 295 NRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP---QYNMSQ 351
+R + GY Q G + ++ G G+ S Q G Q GA GQ+ Q+
Sbjct: 1992 HRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCG--QHGASSGQSSSHGQHGSGS 2049
Query: 352 PPYGGYPSQPTPGGY-PGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 410
GY Q + G PG+
Sbjct: 2050 SQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGH 2109
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGY-----------GQAAPYDQQ-QGYNSA 458
+ S +S Y+Q G G S G H +SG G ++ Y Q G +
Sbjct: 2110 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQS 2169
Query: 459 AGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA 518
+G+G + S GH+PS G G + S++ GQ G G+G+ S + Y +
Sbjct: 2170 SGHGRQGSGS--GHSPSRGRHGSGSG------HSSSHGQHGSGSGR--SSSRGPYESRSG 2219
Query: 519 TQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQ--KPLANPPAYGQTQQSPGSAGGYGQ 576
+G S SG+ S +G+ Q Q + Q S G + +GQ
Sbjct: 2220 HSSVFG-QHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQ 2278
Query: 577 PGYSHSQPPPSSYAQPDSGSQRAP 600
G SQ SSY Q SGS ++P
Sbjct: 2279 HGSGSSQS--SSYGQQGSGSGQSP 2300
Score = 166 (63.5 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 72/317 (22%), Positives = 110/317 (34%)
Query: 295 NRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP---QYNMSQ 351
+R + GY Q G + ++ G G+ S Q G Q GA GQ+ Q+
Sbjct: 1522 HRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCG--QHGASSGQSSSHGQHGSGS 1579
Query: 352 PPYGGYPSQPTPGGY-PGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 410
GY Q + G PG+
Sbjct: 1580 SQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGH 1639
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
+ S +S Y+Q G G S G H +SG S++ YG + S++
Sbjct: 1640 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSS-RSSSRYGQHGSGSRQ 1698
Query: 471 GHTPSYGAQGD-STQAPPPVQSSAAMGQQG----YGTGQQPSPNTASYPPQGATQPSYGV 525
+ +G QG S Q+P + + +G +G+G S + Y + +G
Sbjct: 1699 --SSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFG- 1755
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQ--KPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
S SG+ S +G+ Q Q + Q S G + +GQ G SQ
Sbjct: 1756 QHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQ 1815
Query: 584 PPPSSYAQPDSGSQRAP 600
SSY Q SGS ++P
Sbjct: 1816 S--SSYGQQGSGSGQSP 1830
Score = 166 (63.5 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 77/321 (23%), Positives = 110/321 (34%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG 365
+ Q G + +S G GA S Q +G Q G+ Q+ +Y G PS+ G
Sbjct: 610 HGQHGSTSGQSSSCGQHGATSGQSSSHG--QHGSGSSQSSRYGQQGSGSGQSPSRGRHGS 667
Query: 366 YPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSY---SQPPASGYN 422
G+ GYS +SGY
Sbjct: 668 DFGHSSSYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYR 727
Query: 423 QQGQGYAQDSYGGYHAPQSG----YGQ-AAPYDQQQGYN---SAAGYG--NVNNTSQEGH 472
+ G Q S H SG YGQ + Q G+ S +G+ V + S GH
Sbjct: 728 KHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGH 787
Query: 473 TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT--SQ 530
+ S+G G T + Q G GQ S + Y G+ + S
Sbjct: 788 SSSHGQHGSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGST 847
Query: 531 SGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGS--AGGYGQPGYSHSQPPPSS 588
SG S +G Q A+ A G+ + GS + G+GQ G Q P S
Sbjct: 848 SGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSP--S 905
Query: 589 YAQPDSGSQRAPPSN-YGAAT 608
Y + SGS R+ S +G+ +
Sbjct: 906 YGRHGSGSGRSSSSGRHGSGS 926
Score = 163 (62.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 75/324 (23%), Positives = 113/324 (34%)
Query: 295 NRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP---QYNMSQ 351
+R + GY Q G + ++ G G+ S Q G Q GA GQ+ Q+
Sbjct: 1052 HRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCG--QHGASSGQSSSHGQHGSGS 1109
Query: 352 PPYGGYPSQPTPGGY-PGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 410
GY Q + G PG+
Sbjct: 1110 SQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGH 1169
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGY-----------GQAAPYDQQ-QGYNSA 458
+ S +S Y+Q G G S G H +SG G ++ Y Q G +
Sbjct: 1170 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQS 1229
Query: 459 AGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA 518
+G+G + S GH+PS G G + S++ GQ G G+G+ S + Y +
Sbjct: 1230 SGHGRQGSGS--GHSPSRGRHGSG------LGHSSSHGQHGSGSGR--SSSRGPYESRSG 1279
Query: 519 TQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQ--KPLANPPAYGQTQQSPGSAGGYGQ 576
+G S SG+ S +G+ Q Q + Q S G + YG
Sbjct: 1280 HSSVFG-QHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGH 1338
Query: 577 PGYSHSQPPPSSYAQPDSGSQRAP 600
G SQ S Y + +GS ++P
Sbjct: 1339 RGSGSSQS--SGYGRHGAGSGQSP 1360
Score = 163 (62.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 57/192 (29%), Positives = 80/192 (41%)
Query: 419 SGYNQQ-GQGYAQDS--YGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
SG Q G G+ S GY SG G ++ Y+Q G S + + S G + S
Sbjct: 924 SGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQH-GSRSGQSSRSEQHGSSSGSSSS 982
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGS 535
YG G ++ S GQ G G+GQ PSP+ + SYG P S SG+ S
Sbjct: 983 YGQHGSGSR------QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYG-PYRSGSGWSS 1035
Query: 536 QVPPQSGYAGY--GMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPD 593
P +G+ G+ + YGQ S G + +GQ G + Q SS Q
Sbjct: 1036 SRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQS--SSCGQ-- 1091
Query: 594 SGSQRAPPSNYG 605
G+ S++G
Sbjct: 1092 HGASSGQSSSHG 1103
Score = 162 (62.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 54/190 (28%), Positives = 80/190 (42%)
Query: 418 ASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYG 477
+SG+ Q S GY SG G ++ Y+Q + + G + +S G + SYG
Sbjct: 1868 SSGFGHHESSSWQSS--GYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSS-GSSSSYG 1924
Query: 478 AQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQV 537
G ++ S GQ G G+GQ PSP+ + SYG P S SG+ S
Sbjct: 1925 QHGSGSR------QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYG-PYGSGSGWSSSR 1977
Query: 538 PPQSGYAGY--GMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSG 595
P +G+ G+ + YGQ S G + +GQ G + Q SS Q G
Sbjct: 1978 GPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQS--SSCGQ--HG 2033
Query: 596 SQRAPPSNYG 605
+ S++G
Sbjct: 2034 ASSGQSSSHG 2043
Score = 155 (59.6 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 72/304 (23%), Positives = 112/304 (36%)
Query: 308 QQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG-GYPSQPTPGGY 366
Q G + +S+G G+ S Q G+G Q G+ GQ+P + + G G S P G
Sbjct: 1912 QHGSSSGSSSSYGQHGSGSRQSLGHG--QHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGS 1969
Query: 367 PGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQP-PASGYN--- 422
W ++ Q ASG +
Sbjct: 1970 GSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSC 2029
Query: 423 -QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTSQEGHTPSYGAQG 480
Q G Q S G H SG Q++ Y +Q G + G+G + S++ +PSYG G
Sbjct: 2030 GQHGASSGQSSSHGQHG--SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ--SPSYGRHG 2085
Query: 481 D-STQAPPPVQSSAAMGQQ-GYGTGQQPSPNTASYPPQGATQ---PSYGVPPTSQSGYGS 535
S ++ Q +G+ G+G + S ++SY G+ YG S+SG S
Sbjct: 2086 SGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYG-QHGSRSGQSS 2144
Query: 536 QVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSG 595
+ +G Q + + G +Q GS + + SS+ Q SG
Sbjct: 2145 RGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSG 2204
Query: 596 SQRA 599
S R+
Sbjct: 2205 SGRS 2208
Score = 155 (59.6 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 74/307 (24%), Positives = 113/307 (36%)
Query: 308 QQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGYP 367
+ G +R + +G G+ S Q G+G + G+ GQ+P G S G
Sbjct: 1678 RHGSSSRSSSRYGQHGSGSRQSSGHG--RQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGS 1735
Query: 368 GN------WDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGY 421
G ++ G + Q +S +
Sbjct: 1736 GRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQ--SSTF 1793
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGD 481
+Q+G Q S G H SG Q++ Y QQ G S + S GH+ SYG G
Sbjct: 1794 DQEGSSTGQSSSHGQHG--SGSSQSSSYGQQ-GSGSGQSPSRGRHGSGSGHSSSYGQHGS 1850
Query: 482 STQAPPPVQSSAAMGQQGYGTGQQPS---PNTASYPPQGATQPSYGVPPTSQSGYGSQVP 538
+ S++ G+ G G+GQ ++S+ G TQ +G S Y Q
Sbjct: 1851 GSGW------SSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQ--HGSGSGHSSSY-EQHG 1901
Query: 539 PQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQR 598
+SG + G Q + +YGQ + G+GQ G Q P S + SGS +
Sbjct: 1902 SRSGQSSRG-EQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQ 1960
Query: 599 APPSNYG 605
+ S+YG
Sbjct: 1961 S--SSYG 1965
Score = 155 (59.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 53/190 (27%), Positives = 79/190 (41%)
Query: 418 ASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYG 477
+SG+ Q S GY SG G ++ Y+Q + + G + +S G + SYG
Sbjct: 2338 SSGFGHHESSSWQSS--GYTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSS-GSSSSYG 2394
Query: 478 AQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQV 537
G ++ S GQ G G+GQ PSP+ + SY P S SG+ S
Sbjct: 2395 QHGSGSR------QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYS-PYGSGSGWSSSR 2447
Query: 538 PPQSGYAGY--GMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSG 595
P +G+ G+ + YGQ S G + +GQ G + Q SS Q G
Sbjct: 2448 GPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQS--SSCGQ--HG 2503
Query: 596 SQRAPPSNYG 605
+ S++G
Sbjct: 2504 ASSGQSSSHG 2513
Score = 153 (58.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 79/311 (25%), Positives = 120/311 (38%)
Query: 308 QQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG-GYPSQPTPGGY 366
+ G + +S+G G+ S Q G+G Q G+ GQ+P + + G G S +P G
Sbjct: 1442 RHGSSSGSSSSYGQHGSGSRQSLGHG--QHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGS 1499
Query: 367 PGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPA-SGYN--- 422
W ++ Q + SG +
Sbjct: 1500 GSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSC 1559
Query: 423 -QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTSQEGHTPSYGAQG 480
Q G Q S G H SG Q++ Y +Q G + G+G + S++ +PSYG G
Sbjct: 1560 GQHGASSGQSSSHGQHG--SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ--SPSYGRHG 1615
Query: 481 D-STQAPPPVQSSAAMGQQ-GYGTGQQPSPNTASYPPQGATQ---PSYGVPPTSQSG--- 532
S ++ Q + +G+ G+G + S ++SY G+ YG S+SG
Sbjct: 1616 SGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYG-QHGSRSGQSS 1674
Query: 533 ----YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSS 588
+GS S Y +G Q G + QSP S G +G G HS SS
Sbjct: 1675 RGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSG-SGQSP-SRGRHGS-GLGHS----SS 1727
Query: 589 YAQPDSGSQRA 599
+ Q SGS R+
Sbjct: 1728 HGQHGSGSGRS 1738
Score = 152 (58.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 75/309 (24%), Positives = 118/309 (38%)
Query: 308 QQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG-GYPSQPTPGGY 366
+ G + +S+G G+ S Q G+G Q G+ GQ+P + + G G S +P G
Sbjct: 2382 RHGSSSGSSSSYGQHGSGSRQSLGHG--QHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGS 2439
Query: 367 PGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPA-SGYN--- 422
W ++ Q + SG +
Sbjct: 2440 GSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSC 2499
Query: 423 -QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTSQEGHTPSYGAQG 480
Q G Q S G H SG Q++ Y +Q G + G+G + S++ +PSYG G
Sbjct: 2500 GQHGASSGQSSSHGQHG--SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ--SPSYGRHG 2555
Query: 481 D-STQAPPPVQSSAAMGQQ-GYGTGQQPSPNTASYPPQGATQ---PSYGVPPTSQSGYGS 535
S ++ Q + +G+ G+G + S ++SY G+ YG S+SG S
Sbjct: 2556 SGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYG-QHGSRSGQSS 2614
Query: 536 QVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA-----GGYGQPGYSHSQPPPSSYA 590
+ +G Q + + G +Q GS G +G G HS SS+
Sbjct: 2615 RGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGS-GLGHS----SSHG 2669
Query: 591 QPDSGSQRA 599
Q SGS R+
Sbjct: 2670 QHGSGSGRS 2678
Score = 150 (57.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 56/195 (28%), Positives = 83/195 (42%)
Query: 418 ASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYG 477
+S ++Q+G Q S G H SG Q++ Y QQ G S + S GH+ SYG
Sbjct: 2260 SSTFDQEGSSTGQSSSHGQHG--SGSSQSSSYGQQ-GSGSGQSPSRGRHGSGSGHSSSYG 2316
Query: 478 AQGDSTQAPPPVQSSAAMGQQGYGTGQQPS---PNTASYPPQGATQPSYGVPPTSQSGYG 534
G + S++ G+ G G+GQ ++S+ G TQ +G S Y
Sbjct: 2317 QHGSGSGW------SSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQ--HGSGSGHSSSY- 2367
Query: 535 SQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDS 594
Q +SG + G + +YGQ + G+GQ G Q P S + S
Sbjct: 2368 EQHGSRSGQSSRGERHGSSS-GSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGS 2426
Query: 595 GS-QRAPPSNYGAAT 608
GS Q + S YG+ +
Sbjct: 2427 GSGQSSSYSPYGSGS 2441
Score = 149 (57.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 68/299 (22%), Positives = 101/299 (33%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGA-YPGQTPQYNMSQPPYGGYPS 359
+ + GY +QG + G G+ S Q P YG G+ + Q+ G+
Sbjct: 2520 SQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGH 2579
Query: 360 QPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-YSYSQPPA 418
+ G ++ G + +
Sbjct: 2580 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQS 2639
Query: 419 SGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGA 478
SG+ +QG G Q G H SG G ++ + Q G S S+ GH+ +G
Sbjct: 2640 SGHGRQGSGSGQSPSRGRHG--SGLGHSSSHGQH-GSGSGRSSSRGPYESRLGHSSVFG- 2695
Query: 479 QGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNT-ASYPPQGATQPSYGVPPTSQSGYGSQV 537
Q +S S+A Q G G+G S S Q +T G S YG +
Sbjct: 2696 QHESGSG-----HSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRG 2750
Query: 538 PPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGS 596
S +GYG A ++G+ G + YGQ G Q S Y+Q SGS
Sbjct: 2751 SGSSQSSGYGRHGAGS--GQSLSHGRHGSGSGQSSSYGQHGSGSGQS--SGYSQHGSGS 2805
Score = 146 (56.5 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 75/311 (24%), Positives = 116/311 (37%)
Query: 308 QQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQ--------PPYGGYPS 359
Q G + +S+G G+ S Q G+G Q G+ GQ+P + + YG Y S
Sbjct: 972 QHGSSSGSSSSYGQHGSGSRQSLGHG--QHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRS 1029
Query: 360 QPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPAS 419
G ++ G + Q +
Sbjct: 1030 GSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSC 1089
Query: 420 GYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTSQEGHTPSYGA 478
G Q G Q S G H SG Q++ Y +Q G + G+G + S++ +PSYG
Sbjct: 1090 G--QHGASSGQSSSHGQHG--SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ--SPSYGR 1143
Query: 479 QGD-STQAPPPVQSSAAMGQQ-GYGTGQQPSPNTASYPPQGATQ---PSYGVPPTSQSGY 533
G S ++ Q + +G+ G+G + S ++SY G+ YG S+SG
Sbjct: 1144 HGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYG-QHGSRSGQ 1202
Query: 534 GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA-----GGYGQPGYSHSQPPPSS 588
S+ +G Q + + G +Q GS G +G G HS SS
Sbjct: 1203 SSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGS-GLGHS----SS 1257
Query: 589 YAQPDSGSQRA 599
+ Q SGS R+
Sbjct: 1258 HGQHGSGSGRS 1268
Score = 145 (56.1 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 71/327 (21%), Positives = 112/327 (34%)
Query: 295 NRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP---QYNMSQ 351
+R + GY Q G + ++ G G+ S Q G Q GA GQ+ Q+
Sbjct: 2462 HRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCG--QHGASSGQSSSHGQHGSGS 2519
Query: 352 PPYGGYPSQPTPGGY-PGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 410
GY Q + G PG+
Sbjct: 2520 SQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGH 2579
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAP-YDQQQGYNSAAGYGNVNNTSQ 469
+ S +S Y+Q G G S G H +SG + G S++ YG + S+
Sbjct: 2580 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSG--SSSHYGQHGSGSR 2637
Query: 470 EGHTPSYGAQGD-STQAPPPVQSSAAMGQQG----YGTGQQPSPNTASYPPQGATQPSYG 524
+ + +G QG S Q+P + + +G +G+G S + Y + +G
Sbjct: 2638 Q--SSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRLGHSSVFG 2695
Query: 525 VPPTSQSGYGSQVPPQSGYAGYGMPQAQ--KPLANPPAYGQTQQSPGSAGGYGQPGYSHS 582
S SG+ S +G+ Q Q + Q S G + YG G S
Sbjct: 2696 -QHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSS 2754
Query: 583 QPPPSSYAQPDSGS-QRAPPSNYGAAT 608
Q S Y + +GS Q +G+ +
Sbjct: 2755 QS--SGYGRHGAGSGQSLSHGRHGSGS 2779
Score = 145 (56.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 53/190 (27%), Positives = 79/190 (41%)
Query: 418 ASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYG 477
+SG+ Q S H SG G ++ Y+Q + + G + +S G + SYG
Sbjct: 1398 SSGFGHHESSSWQSSGCTQHG--SGSGHSSSYEQHGSRSGQSSRGERHGSSS-GSSSSYG 1454
Query: 478 AQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQV 537
G ++ S GQ G G+GQ PSP+ + SY P S SG+ S
Sbjct: 1455 QHGSGSR------QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYS-PYGSGSGWSSSR 1507
Query: 538 PP-QSGYA-GYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSG 595
P +SG + G+ + YGQ S G + +GQ G + Q SS Q G
Sbjct: 1508 GPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQS--SSCGQ--HG 1563
Query: 596 SQRAPPSNYG 605
+ S++G
Sbjct: 1564 ASSGQSSSHG 1573
Score = 142 (55.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 70/315 (22%), Positives = 111/315 (35%)
Query: 303 AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPT 362
+ Y Q G + +S G G+ S Q G+G+ Q+ GY +
Sbjct: 672 SSSYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGS 731
Query: 363 PGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXGYSYSQPPASGY 421
G + + S +S +
Sbjct: 732 RSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSH 791
Query: 422 NQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGD 481
Q G G + S G++ +SG GQA+ + Q + S +G G + S GH S G G
Sbjct: 792 GQHGSGTSCSSSCGHY--ESGSGQASGFGQHE---SGSGQGYSQHGSASGHFSSQGRHGS 846
Query: 482 ST-QAPPPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPP 539
++ Q+ Q ++ GQ YG + S + + G+ S P Q G GS P
Sbjct: 847 TSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSG--SGQSPGHGQRGSGSGQSP 904
Query: 540 QSGYAGYGMPQAQKPLANPPAYGQT-----QQSPGSAGGYGQPGYSHSQPPPSSYAQPDS 594
G G G ++ + GQ+ + S G + GY Q G SSY Q S
Sbjct: 905 SYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHS--SSYEQHGS 962
Query: 595 GS-QRAPPSNYGAAT 608
S Q + +G+++
Sbjct: 963 RSGQSSRSEQHGSSS 977
Score = 137 (53.3 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 68/308 (22%), Positives = 103/308 (33%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGA-YPGQTPQYNMSQPPYGGYPS 359
+ + GY +QG + G G+ S Q P YG G+ + Q+ G+
Sbjct: 1110 SQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGH 1169
Query: 360 QPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-YSYSQPPA 418
+ G ++ G + +
Sbjct: 1170 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQS 1229
Query: 419 SGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGA 478
SG+ +QG G G H SG G ++ + Q G S S+ GH+ +G
Sbjct: 1230 SGHGRQGSGSGHSPSRGRHG--SGLGHSSSHGQH-GSGSGRSSSRGPYESRSGHSSVFG- 1285
Query: 479 QGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNT-ASYPPQGATQPSYGVPPTSQSGYGSQV 537
Q +S S+A Q G G+G S S Q +T G S YG +
Sbjct: 1286 QHESGSG-----HSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRG 1340
Query: 538 PPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
S +GYG A P+ G+ G + YGQ G SS + SGS
Sbjct: 1341 SGSSQSSGYGRHGAGS--GQSPSRGRHGSGSGHSSSYGQHGSGSGWS--SSSGRHGSGSG 1396
Query: 598 RAPPSNYG 605
++ S +G
Sbjct: 1397 QS--SGFG 1402
Score = 136 (52.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 56/204 (27%), Positives = 82/204 (40%)
Query: 410 GYSYSQPP---ASGYNQQGQGYAQDSY---GGYHAPQSGYGQAAPYDQQQGYNSAAGYGN 463
G S S P SGY+ G G+ + S GY SG G ++ + Q + + G
Sbjct: 447 GRSSSSGPYVSGSGYSS-GFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGE 505
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY 523
+S G + SYG G ++ S + G G+GQ PSP+ + SY
Sbjct: 506 RQGSSA-GSSSSYGQHGSGSR------QSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSY 558
Query: 524 GVPPTSQSGYGSQVPPQSGYAGY--GMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSH 581
G P SG S P +G+ G+ + YGQ S G + +GQ G +
Sbjct: 559 G-PHGYGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTS 617
Query: 582 SQPPPSSYAQPDSGSQRAPPSNYG 605
Q SS Q G+ S++G
Sbjct: 618 GQS--SSCGQ--HGATSGQSSSHG 637
Score = 136 (52.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 67/320 (20%), Positives = 106/320 (33%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG---GY 357
+ + GY +QG + G G+ S Q P YG + G+ G++ P G G+
Sbjct: 2050 SQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYG--RHGSGSGRSSSSGQHGPGLGESSGF 2107
Query: 358 PSQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-YSYSQP 416
+ G ++ G +
Sbjct: 2108 GHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSR 2167
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGY-------GQAAPYDQQQG-YNSAAGYGNV--NN 466
+SG+ +QG G G H SG+ G + +G Y S +G+ +V +
Sbjct: 2168 QSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQH 2227
Query: 467 TSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPS-PNTASYPPQGATQPSYGV 525
S GH+ +Y G + + GQ G +GQ + S Q ++ +G
Sbjct: 2228 ESGSGHSSAYSQHGSGSG------HFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGS 2281
Query: 526 PPTSQSGYGSQ-----VPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQP-GY 579
+ S YG Q P G G G + + G + S G GQ G+
Sbjct: 2282 GSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGF 2341
Query: 580 SHSQPPP---SSYAQPDSGS 596
H + S Y Q SGS
Sbjct: 2342 GHHESSSWQSSGYTQHGSGS 2361
Score = 135 (52.6 bits), Expect = 0.00012, P = 0.00012
Identities = 70/309 (22%), Positives = 105/309 (33%)
Query: 306 YSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG 365
+ Q+G +S G G+ S Q YG Q G+ GQ+P G S G
Sbjct: 1793 FDQEGSSTGQSSSHGQHGSGSSQSSSYG--QQGSGSGQSPSRGRHGSGSGHSSSYGQHGS 1850
Query: 366 YPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPA-SGYNQQ 424
G W SY Q + SG + +
Sbjct: 1851 GSG-WSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSR 1909
Query: 425 GQ--GYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTSQEGHTPSYGAQGD 481
G+ G + S Y SG Q+ + Q G + + S G + SYG G
Sbjct: 1910 GEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGS 1969
Query: 482 ST---QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ---PSYGVPPTSQSGYGS 535
+ + P +S + G G + S ++ Y G++ ++G S SG S
Sbjct: 1970 GSGWSSSRGPYESGSGHSS-GLGHRESRSGQSSGYGQHGSSSGHSSTHG-QHGSASGQSS 2027
Query: 536 QVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGS--AGGYGQPGYSHSQPPPSSYAQPD 593
+G Q + + G +Q GS + G+GQ G Q P SY +
Sbjct: 2028 SCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSP--SYGRHG 2085
Query: 594 SGSQRAPPS 602
SGS R+ S
Sbjct: 2086 SGSGRSSSS 2094
Score = 132 (51.5 bits), Expect = 0.00025, P = 0.00025
Identities = 67/308 (21%), Positives = 102/308 (33%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGA-YPGQTPQYNMSQPPYGGYPS 359
+ + GY +QG + G G+ S Q P YG G+ + Q+ G+
Sbjct: 1580 SQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGH 1639
Query: 360 QPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-YSYSQPPA 418
+ G ++ G + +
Sbjct: 1640 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQS 1699
Query: 419 SGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGA 478
SG+ +QG G Q G H SG G ++ + Q G S S+ GH+ +G
Sbjct: 1700 SGHGRQGSGSGQSPSRGRHG--SGLGHSSSHGQH-GSGSGRSSSRGPYESRSGHSSVFG- 1755
Query: 479 QGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNT-ASYPPQGATQPSYGVPPTSQSGYGSQV 537
Q +S S+A Q G G+G S S Q +T G S +G
Sbjct: 1756 QHESGSG-----HSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHG 1810
Query: 538 PPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQ 597
S + YG Q P+ G+ G + YGQ G SS + SGS
Sbjct: 1811 SGSSQSSSYG--QQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWS--SSSGRHGSGSG 1866
Query: 598 RAPPSNYG 605
++ S +G
Sbjct: 1867 QS--SGFG 1872
Score = 129 (50.5 bits), Expect = 0.00052, P = 0.00052
Identities = 56/184 (30%), Positives = 78/184 (42%)
Query: 418 ASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQ-GYNSAAGYGNVNNTSQEGHTPSY 476
+S + Q G G + SY H +SG GQ + + Q + G ++GY + S GH+ S
Sbjct: 319 SSSHGQHGSGSSY-SYSRGHY-ESGSGQTSGFGQHESGSGQSSGYSK--HGSGSGHSSSQ 374
Query: 477 GAQGDST-QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGV---PPTSQSG 532
G G ++ QA Q ++ +Q GQ S AS G Q S G P Q G
Sbjct: 375 GQHGSTSGQASSSGQHGSS-SRQSSSYGQHES---ASRHSSGRGQHSSGSGQSPGHGQRG 430
Query: 533 YGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQP 592
GS P SG G G ++ + P G G + G+G + S S Y Q
Sbjct: 431 SGSGQSPSSGQHGTGFGRSSS--SGPYVSGS-----GYSSGFGH--HESSSEHSSGYTQH 481
Query: 593 DSGS 596
SGS
Sbjct: 482 GSGS 485
Score = 127 (49.8 bits), Expect = 0.00085, P = 0.00085
Identities = 64/219 (29%), Positives = 93/219 (42%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ---QGYNSAAG-YGNVNN 466
YSYS+ G+ + G G Q S G H +SG GQ++ Y + G++S+ G +G+ +
Sbjct: 331 YSYSR----GHYESGSG--QTSGFGQH--ESGSGQSSGYSKHGSGSGHSSSQGQHGSTSG 382
Query: 467 -TSQEGHTPSYGAQGDST-QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ-PSY 523
S G S Q S Q + S+ GQ G+GQ P G+ Q PS
Sbjct: 383 QASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRG---SGSGQSPSS 439
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGS--AGGYGQPGYSH 581
G T S P SG +GY ++ + G TQ GS + G+GQ G
Sbjct: 440 GQHGTGFGRSSSSGPYVSG-SGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRS 498
Query: 582 SQPP-----------PSSYAQPDSGSQRA-PPSNYGAAT 608
Q SSY Q SGS+++ S +G+ +
Sbjct: 499 GQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGS 537
Score = 38 (18.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 293 SENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQY 347
SE + ++ Y Q G + + G G+ S P V+ G+ G + +
Sbjct: 739 SEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSR--VRHGSSSGHSSSH 791
>UNIPROTKB|I3LRF8 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0003723
GeneTree:ENSGT00550000074311 OMA:FWAPSVL EMBL:FP312938
Ensembl:ENSSSCT00000030310 Uniprot:I3LRF8
Length = 265
Score = 157 (60.3 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 77/245 (31%), Positives = 109/245 (44%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK GET+K ++ +SGA+I ++ N P R
Sbjct: 35 VSEGGLNVTLTIRLL-MHGKEVGSIIGKKGETVKKMREESGARINISEG-----NCPERI 88
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGI--VARRLTGQAGSDHFAMKIPNNKVGLVI 236
V + G + I KA +I E S SG+ +A G + + VG V+
Sbjct: 89 VTITGPTDAIFKAFAMIAYKFEEV-SRVSGLCEIAENAFGVWTQRVITLGVT---VGCVL 144
Query: 237 GKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENR 296
G+G ++ TGA++QV LP STER V I GT + I + + V+ E+
Sbjct: 145 GQGPLCPPGLKGSTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESP 201
Query: 297 IRN--------PA-----MAGG--YSQQGYQARP-PTSWGTPGAPSMQQ---PGYGYVQP 337
+ PA AGG Y+ QG A P P +MQQ P G P
Sbjct: 202 PKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNP 261
Query: 338 GAYPG 342
A+PG
Sbjct: 262 -AFPG 265
>ZFIN|ZDB-GENE-030707-4 [details] [associations]
symbol:anxa11a "annexin A11a" species:7955 "Danio
rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005544
"calcium-dependent phospholipid binding" evidence=IEA]
InterPro:IPR001464 InterPro:IPR008157 InterPro:IPR018252
InterPro:IPR018502 Pfam:PF00191 PRINTS:PR00196 PROSITE:PS00223
SMART:SM00335 ZFIN:ZDB-GENE-030707-4 GO:GO:0005509 eggNOG:NOG267770
GO:GO:0005544 Gene3D:1.10.220.10 PANTHER:PTHR10502 SUPFAM:SSF47874
HOVERGEN:HBG061815 PANTHER:PTHR10502:SF29 HSSP:P79134 EMBL:AY178801
IPI:IPI00498021 UniGene:Dr.77310 ProteinModelPortal:Q804G4
SMR:Q804G4 PRIDE:Q804G4 InParanoid:Q804G4 NextBio:20812811
ArrayExpress:Q804G4 Bgee:Q804G4 Uniprot:Q804G4
Length = 526
Score = 113 (44.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 50/174 (28%), Positives = 62/174 (35%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAPYDQ--QQGYNSAAGYGNVNNTSQEGH 472
PP G G G Y + P G+G D G+N++ G N + +G
Sbjct: 48 PPQPGAYPPQPGAFPGQPGQYPSVPSGGWGAPIGLDNLPNPGFNASNIQGMANQFAADGG 107
Query: 473 ---TPSY---GAQGDSTQAPPPVQSSAAMG---QQGYGTGQQPSPNTASYPPQGATQPSY 523
PS G G PP V + G Q G G Q P PP G PSY
Sbjct: 108 FAPNPSMFSGGYPGPQPGGPPAVSPNQPYGMYPQPGGGMPQNPGMGYPGGPPPGQQMPSY 167
Query: 524 -GVPPTSQSG--YG---SQVPPQSGYAG-YGMPQAQKPLANPPAYGQTQQSPGS 570
+P + SG Y S P GY G YG P + G Q PG+
Sbjct: 168 PNIPAPTPSGPSYPRAPSPNPSMPGYGGGYGGGAPAVPAISRGFRGSIQDFPGA 221
Score = 99 (39.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 30/67 (44%), Positives = 31/67 (46%)
Query: 305 GYS-QQGYQARPPTSWGTPGAPSMQQPGYG-YV-QPGAYPGQTPQYNMSQPPYGGYPSQP 361
GY Q GY PP G P P P G Y QPG YP Q Y QP G YP P
Sbjct: 5 GYPPQSGY---PPQGGGYPPQPGAYPPAAGGYPPQPGMYPPQAGGYP-PQP--GAYP--P 56
Query: 362 TPGGYPG 368
PG +PG
Sbjct: 57 QPGAFPG 63
Score = 97 (39.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 28/54 (51%), Positives = 28/54 (51%)
Query: 322 PGAP--SMQQP-GYGYV-QPGAYP----GQTPQYNMSQPPYGGYPSQPTPGGYP 367
PG P S P G GY QPGAYP G PQ M P GGYP P PG YP
Sbjct: 4 PGYPPQSGYPPQGGGYPPQPGAYPPAAGGYPPQPGMYPPQAGGYP--PQPGAYP 55
>UNIPROTKB|G3X7R5 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003729 GO:GO:0000398 GeneTree:ENSGT00650000093048
OMA:FRQNNTA EMBL:DAAA02052552 EMBL:DAAA02052553
Ensembl:ENSBTAT00000044049 Uniprot:G3X7R5
Length = 507
Score = 137 (53.3 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 95 DSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYL 154
D + S P+ KS P+ P++ S KI +PN G+IIGK G T+K +
Sbjct: 145 DRIKQTLPSSPTTTKSSPSD---PMT----TSRANQVKIIVPNSTAGLIIGKGGATVKAI 197
Query: 155 QLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGS--GIVAR 212
QSGA +Q+++ + +N R V + G PEQ KA +LI + E GS I
Sbjct: 198 MEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYA 256
Query: 213 RLTGQAGSDH 222
+TG + +
Sbjct: 257 NVTGPVANSN 266
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 45/154 (29%), Positives = 67/154 (43%)
Query: 158 SGAKIQVTRDTEADLNSPTRSVELMGTPE--QIAKAEQLINDVLAEAES-GGSGIVARRL 214
+ A + T +EA + T GT +A A N A S I+
Sbjct: 357 AAANLLATYASEASASGSTAG-GTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEK 415
Query: 215 TGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSTERTVQ 273
+ D + +P N VG ++GKGG+T+ Q TGARIQ+ PG + R V
Sbjct: 416 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG--TRNRKVT 473
Query: 274 IDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
I GT ++A+ L+ + I+ E +R NP G
Sbjct: 474 ITGTPAATQAAQYLITQRITYEQGVRAANPQKVG 507
Score = 120 (47.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
+PN+ GL+IGKGG T+K + ++GA +Q+ P G ER V + G EQ A +
Sbjct: 178 VPNSTAGLIIGKGGATVKAIMEQSGAWVQLS--QKPDGINLQERVVTVSGEPEQNRKAVE 235
Query: 287 LVNEVISEN 295
L+ + I E+
Sbjct: 236 LIIQKIQED 244
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 207 SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLH-LPPGD 265
+G R TG+ G + IP+ G +IGKGG+TI +Q TGA I++ PG
Sbjct: 36 AGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG- 94
Query: 266 TSTERTVQIDGTSEQIESAKQLVNEVISE 294
+TER I GT E + + + E I E
Sbjct: 95 -TTERVCLIQGTVEALNAVHGFIAEKIRE 122
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
Query: 192 EQLINDVLAE 201
I + + E
Sbjct: 113 HGFIAEKIRE 122
Score = 40 (19.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 276 GTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQ 312
GT + + +K +V + EN + GG + YQ
Sbjct: 412 GTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQ 448
>UNIPROTKB|J9NXS6 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00650000093048 CTD:4857
KO:K14944 OMA:FRQNNTA EMBL:AAEX03005630 EMBL:AAEX03005631
RefSeq:XP_547754.1 Ensembl:ENSCAFT00000044255 GeneID:490632
KEGG:cfa:490632 Uniprot:J9NXS6
Length = 507
Score = 137 (53.3 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 95 DSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYL 154
D + S P+ KS P+ P++ S KI +PN G+IIGK G T+K +
Sbjct: 145 DRIKQTLPSSPTTTKSSPSD---PMT----TSRANQVKIIVPNSTAGLIIGKGGATVKAI 197
Query: 155 QLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGS--GIVAR 212
QSGA +Q+++ + +N R V + G PEQ KA +LI + E GS I
Sbjct: 198 MEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYA 256
Query: 213 RLTGQAGSDH 222
+TG + +
Sbjct: 257 NVTGPVANSN 266
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 45/154 (29%), Positives = 67/154 (43%)
Query: 158 SGAKIQVTRDTEADLNSPTRSVELMGTPE--QIAKAEQLINDVLAEAES-GGSGIVARRL 214
+ A + T +EA + T GT +A A N A S I+
Sbjct: 357 AAANLLATYASEASASGSTAG-GTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEK 415
Query: 215 TGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSTERTVQ 273
+ D + +P N VG ++GKGG+T+ Q TGARIQ+ PG + R V
Sbjct: 416 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG--TRNRKVT 473
Query: 274 IDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
I GT ++A+ L+ + I+ E +R NP G
Sbjct: 474 ITGTPAATQAAQYLITQRITYEQGVRAANPQKVG 507
Score = 120 (47.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
+PN+ GL+IGKGG T+K + ++GA +Q+ P G ER V + G EQ A +
Sbjct: 178 VPNSTAGLIIGKGGATVKAIMEQSGAWVQLS--QKPDGINLQERVVTVSGEPEQNRKAVE 235
Query: 287 LVNEVISEN 295
L+ + I E+
Sbjct: 236 LIIQKIQED 244
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 207 SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLH-LPPGD 265
+G R TG+ G + IP+ G +IGKGG+TI +Q TGA I++ PG
Sbjct: 36 AGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG- 94
Query: 266 TSTERTVQIDGTSEQIESAKQLVNEVISE 294
+TER I GT E + + + E I E
Sbjct: 95 -TTERVCLIQGTVEALNAVHGFIAEKIRE 122
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
Query: 192 EQLINDVLAE 201
I + + E
Sbjct: 113 HGFIAEKIRE 122
Score = 40 (19.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 276 GTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQ 312
GT + + +K +V + EN + GG + YQ
Sbjct: 412 GTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQ 448
>WB|WBGene00003978 [details] [associations]
symbol:pes-4 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 EMBL:FO081827 GeneTree:ENSGT00550000074311
eggNOG:NOG315872 RefSeq:NP_497351.3 ProteinModelPortal:Q95Y67
SMR:Q95Y67 PaxDb:Q95Y67 EnsemblMetazoa:Y119D3B.17 GeneID:175288
KEGG:cel:CELE_Y119D3B.17 UCSC:Y119D3B.17 CTD:175288
WormBase:Y119D3B.17 HOGENOM:HOG000020666 InParanoid:Q95Y67
OMA:PHSTERA NextBio:887534 Uniprot:Q95Y67
Length = 432
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 53/157 (33%), Positives = 77/157 (49%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL 199
VG IIGK G+ IK ++ +SGAKI ++ D + P R V + GT I KA ++ +
Sbjct: 83 VGSIIGKKGDQIKKIREESGAKINIS-----DGSCPERIVTITGTLGVIGKAFNMVCNKF 137
Query: 200 AEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTGARIQVI 257
E L M++ P + G +IGKGG IK+++ TGA IQV
Sbjct: 138 EED--------MLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVA 189
Query: 258 PLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
LP STER V + GT++ I V +++ E
Sbjct: 190 SEMLPH---STERAVTLSGTADAINLCMTQVCQILLE 223
>MGI|MGI:1890471 [details] [associations]
symbol:Pcbp4 "poly(rC) binding protein 4" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=ISO] [GO:0007050
"cell cycle arrest" evidence=ISO] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 MGI:MGI:1890471 GO:GO:0005737 GO:GO:0003677
GO:GO:0003723 GO:GO:0030529 GeneTree:ENSGT00550000074311
eggNOG:NOG315872 HOGENOM:HOG000182823 HOVERGEN:HBG053520 KO:K13162
CTD:57060 OrthoDB:EOG48D0VR EMBL:AF176328 EMBL:BC010694
IPI:IPI00118718 RefSeq:NP_067542.3 UniGene:Mm.286394
ProteinModelPortal:P57724 SMR:P57724 STRING:P57724
PhosphoSite:P57724 PaxDb:P57724 PRIDE:P57724
Ensembl:ENSMUST00000024260 GeneID:59092 KEGG:mmu:59092
InParanoid:P57724 NextBio:314742 Bgee:P57724 CleanEx:MM_PCBP4
Genevestigator:P57724 GermOnline:ENSMUSG00000023495 Uniprot:P57724
Length = 403
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 66/234 (28%), Positives = 105/234 (44%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLI---- 195
VG IIGK GET+K ++ QS A+I ++ + P R + G+ + A +I
Sbjct: 29 VGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKL 83
Query: 196 -NDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
D+ A +GGS V+R + IP ++ G +IGK G IK ++ TGA++
Sbjct: 84 DEDLCAAPANGGS--VSRPPVT------LRLVIPASQCGSLIGKAGTKIKEIRETTGAQV 135
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIR------NPAMAGGY-- 306
QV LP STER V + G + I + + VI E+ + +P+++ G
Sbjct: 136 QVAGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVL 192
Query: 307 --SQQGYQARPPTSWGTPG-APSMQQ-PGYG--YVQPGAYPGQTPQYNMSQPPY 354
+ QG+ + TP +QQ G+ + P PG P S +
Sbjct: 193 LSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGMDPSTQTSSQEF 246
Score = 105 (42.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGG--FDSADKGFSSPPSDLKSIPAPSAIP 118
+ KR EQ +AR+ S + +R GS F + DL A P
Sbjct: 38 ETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDL------CAAP 91
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
+ G + ++ IP + G +IGK+G IK ++ +GA++QV D NS R+
Sbjct: 92 ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP--NSTERA 149
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGI 209
V + G P+ I + I V+ E+ G+ I
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESPPKGATI 180
Score = 89 (36.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 43/182 (23%), Positives = 71/182 (39%)
Query: 184 TPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETI 243
TP ++ K +QL + A S + + Q S F +PN+ +G VIG+ G I
Sbjct: 209 TPAEVTKLQQLSGHAVPFASP--SVVPGMDPSTQTSSQEFL--VPNDLIGCVIGRQGSKI 264
Query: 244 KNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMA 303
++ +GA I++ + + ER V I G+ I A+ L+ + + +
Sbjct: 265 SEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTP 320
Query: 304 GGYSQQGYQARPPTSWGTPGAP-SMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPT 362
G P P AP + Y + + G P ++ PP P P
Sbjct: 321 GSAPADLPTPFSPPLTALPTAPPGLLGTPYA-ISLSNFIGLKPVPFLALPPAS--PGPP- 376
Query: 363 PG 364
PG
Sbjct: 377 PG 378
>UNIPROTKB|Q0VCU0 [details] [associations]
symbol:PCBP4 "Poly(rC)-binding protein 4" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0003677 GO:GO:0003723
GO:GO:0030529 GeneTree:ENSGT00550000074311 eggNOG:NOG315872
HOGENOM:HOG000182823 HOVERGEN:HBG053520 KO:K13162 EMBL:BC120009
IPI:IPI00707807 RefSeq:NP_001068751.1 UniGene:Bt.7587
ProteinModelPortal:Q0VCU0 SMR:Q0VCU0 PRIDE:Q0VCU0
Ensembl:ENSBTAT00000024779 GeneID:506889 KEGG:bta:506889 CTD:57060
InParanoid:Q0VCU0 OMA:MSSSDAG OrthoDB:EOG48D0VR NextBio:20867786
Uniprot:Q0VCU0
Length = 403
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 61/220 (27%), Positives = 100/220 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLI---- 195
VG IIGK GET+K ++ QS A+I ++ + P R + G+ + A +I
Sbjct: 29 VGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKL 83
Query: 196 NDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
++ L A + G + +T + IP ++ G +IGK G IK ++ TGA++Q
Sbjct: 84 DEDLCAAPANGGNVSRPPVT-------LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 256 VIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIR------NPAMAGGY--- 306
V LP STER V + G + I + + VI E+ + +P+++ G
Sbjct: 137 VAGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLL 193
Query: 307 -SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP 345
+ QG+ + TP + Q G+ P A P P
Sbjct: 194 STNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVP 233
Score = 105 (42.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGG--FDSADKGFSSPPSDLKSIPAPSAIP 118
+ KR EQ +AR+ S + +R GS F + DL A P
Sbjct: 38 ETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDL------CAAP 91
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
+ G + ++ IP + G +IGK+G IK ++ +GA++QV D NS R+
Sbjct: 92 ANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP--NSTERA 149
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGI 209
V + G P+ I + I V+ E+ G+ I
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESPPKGATI 180
Score = 88 (36.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 43/182 (23%), Positives = 71/182 (39%)
Query: 184 TPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETI 243
TP ++ K +QL + A S + + Q S F +PN+ +G VIG+ G I
Sbjct: 209 TPAEVTKLQQLSGHAVPFASP--SMVPGLDPSTQTSSQEFL--VPNDLIGCVIGRQGSKI 264
Query: 244 KNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMA 303
++ +GA I++ + + ER V I G+ I A+ L+ + + +
Sbjct: 265 SEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTP 320
Query: 304 GGYSQQGYQARPPTSWGTPGAP-SMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPT 362
G P P AP + Y + + G P ++ PP P P
Sbjct: 321 GSAPTDLPAPFSPPLTALPTAPPGLLGTPYA-ISLSNFIGLKPVPFLALPPAS--PGPP- 376
Query: 363 PG 364
PG
Sbjct: 377 PG 378
>RGD|708580 [details] [associations]
symbol:Igf2bp1 "insulin-like growth factor 2 mRNA binding protein
1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006403 "RNA localization" evidence=IMP] [GO:0010494
"cytoplasmic stress granule" evidence=ISS] [GO:0010610 "regulation
of mRNA stability involved in response to stress" evidence=ISS]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=IEA] [GO:0045182
"translation regulator activity" evidence=IEA] [GO:0048027 "mRNA
5'-UTR binding" evidence=IEA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IEA] [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 Pfam:PF13014 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 RGD:708580
GO:GO:0005886 GO:GO:0005634 GO:GO:0017148 GO:GO:0000166
GO:GO:0030425 Gene3D:3.30.70.330 GO:GO:0043197 GO:GO:0045182
GO:GO:0030027 GO:GO:0048027 GO:GO:0003730 GO:GO:0010494
GO:GO:0070937 GO:GO:0070934 HSSP:Q9Y6M1 HOVERGEN:HBG052725
CTD:10642 eggNOG:NOG249985 GeneTree:ENSGT00530000063171
HOGENOM:HOG000000675 OMA:EQETVHV OrthoDB:EOG405S0T GO:GO:0010610
GO:GO:0006403 EMBL:AF541940 IPI:IPI00192556 RefSeq:NP_783184.1
UniGene:Rn.77572 ProteinModelPortal:Q8CGX0 SMR:Q8CGX0 STRING:Q8CGX0
PhosphoSite:Q8CGX0 Ensembl:ENSRNOT00000008139 GeneID:303477
KEGG:rno:303477 UCSC:RGD:708580 InParanoid:Q8CGX0 NextBio:651402
ArrayExpress:Q8CGX0 Genevestigator:Q8CGX0 Uniprot:Q8CGX0
Length = 577
Score = 165 (63.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 62/215 (28%), Positives = 99/215 (46%)
Query: 104 PPSDLKSIPAPSAIP--VSYGGYQSMGTSKKIE--IPNIRVGVIIGKSGETIKYLQLQSG 159
P S P PS++ YG + + ++ IP VG IIGK G+ IK L +
Sbjct: 377 PASSSAVPPPPSSVTGAAPYGSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFAS 436
Query: 160 AKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAG 219
A I++ D S R V + G PE KA+ I L E G + T
Sbjct: 437 ASIKIAPPETPD--SKVRMVVITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLET---- 490
Query: 220 SDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSE 279
H +++P + G VIGKGG+T+ +Q T A + V+P P D + + V+I G
Sbjct: 491 --H--IRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP-DENDQVIVKIIGHFY 544
Query: 280 QIESAKQLVNEVISENRIRNPAMAGGYSQQGYQAR 314
+ A++ + +++++ + ++ G S Q QAR
Sbjct: 545 ASQMAQRKIRDILAQVKQQHQK---GQSNQA-QAR 575
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 58/210 (27%), Positives = 94/210 (44%)
Query: 88 ENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKS 147
ENG G GF S + P + P Q + ++ +P VG IIGK
Sbjct: 164 ENGRRG------GFGSRGQPRQGSPVAAGAPAKQ---QQVDIPLRLLVPTQYVGAIIGKE 214
Query: 148 GETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL-AEAESGG 206
G TI+ + Q+ +KI V R A + +++ + TPE + A ++I +++ EA+
Sbjct: 215 GATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSSACKMILEIMHKEAKD-- 270
Query: 207 SGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
T A D +KI NN VG +IGK G +K ++ T +I + L
Sbjct: 271 --------TKTA--DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQ-DLT 319
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVISE 294
+ ERT+ + G E A+Q + + + E
Sbjct: 320 LYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 15 KRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
+ YE+ S + G + + P S ++VPPP
Sbjct: 348 REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPP 386
>MGI|MGI:104297 [details] [associations]
symbol:Nova1 "neuro-oncological ventral antigen 1"
species:10090 "Mus musculus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP;IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IC]
[GO:0007399 "nervous system development" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 MGI:MGI:104297 GO:GO:0005634 GO:GO:0003729
GO:GO:0000398 GeneTree:ENSGT00650000093048 CTD:4857
eggNOG:NOG258094 HOGENOM:HOG000007833 HOVERGEN:HBG082048 KO:K14944
OMA:FRQNNTA ChiTaRS:NOVA1 EMBL:AC108802 EMBL:AC156636 EMBL:AF232828
EMBL:AK047565 IPI:IPI00659424 RefSeq:NP_067336.1 UniGene:Mm.247195
ProteinModelPortal:Q9JKN6 SMR:Q9JKN6 PhosphoSite:Q9JKN6
PaxDb:Q9JKN6 PRIDE:Q9JKN6 Ensembl:ENSMUST00000021438 GeneID:664883
KEGG:mmu:664883 UCSC:uc007nmd.2 InParanoid:Q9JKN6 NextBio:426120
Bgee:Q9JKN6 CleanEx:MM_NOVA1 Genevestigator:Q9JKN6
GermOnline:ENSMUSG00000021047 Uniprot:Q9JKN6
Length = 507
Score = 137 (53.3 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 95 DSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYL 154
D + S P+ KS P+ P++ S KI +PN G+IIGK G T+K +
Sbjct: 145 DRIKQTLPSSPTTTKSSPSD---PMT----TSRANQVKIIVPNSTAGLIIGKGGATVKAI 197
Query: 155 QLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGS--GIVAR 212
QSGA +Q+++ + +N R V + G PEQ KA +LI + E GS I
Sbjct: 198 MEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYA 256
Query: 213 RLTGQAGSDH 222
+TG + +
Sbjct: 257 NVTGPVANSN 266
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 45/154 (29%), Positives = 67/154 (43%)
Query: 158 SGAKIQVTRDTEADLNSPTRSVELMGTPE--QIAKAEQLINDVLAEAES-GGSGIVARRL 214
+ A + T +EA + T GT +A A N A S I+
Sbjct: 357 AAANLLATYASEASASGSTAG-GTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEK 415
Query: 215 TGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSTERTVQ 273
+ D + +P N VG ++GKGG+T+ Q TGARIQ+ PG + R V
Sbjct: 416 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG--TRNRKVT 473
Query: 274 IDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
I GT ++A+ L+ + I+ E +R NP G
Sbjct: 474 ITGTPAATQAAQYLITQRITYEQGVRAANPQKVG 507
Score = 120 (47.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
+PN+ GL+IGKGG T+K + ++GA +Q+ P G ER V + G EQ A +
Sbjct: 178 VPNSTAGLIIGKGGATVKAIMEQSGAWVQLS--QKPDGINLQERVVTVSGEPEQNRKAVE 235
Query: 287 LVNEVISEN 295
L+ + I E+
Sbjct: 236 LIIQKIQED 244
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 207 SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLH-LPPGD 265
+G R TG+ G + IP+ G +IGKGG+TI +Q TGA I++ PG
Sbjct: 36 AGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG- 94
Query: 266 TSTERTVQIDGTSEQIESAKQLVNEVISE 294
+TER I GT E + + + E I E
Sbjct: 95 -TTERVCLIQGTIEALNAVHGFIAEKIRE 122
Score = 90 (36.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 112
Query: 192 EQLINDVLAE 201
I + + E
Sbjct: 113 HGFIAEKIRE 122
Score = 40 (19.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 276 GTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQ 312
GT + + +K +V + EN + GG + YQ
Sbjct: 412 GTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQ 448
>UNIPROTKB|D4AAF8 [details] [associations]
symbol:Nova1 "RNA-binding protein Nova-1" species:10116
"Rattus norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621345 GO:GO:0003729 GO:GO:0000398 EMBL:CH473947
GeneTree:ENSGT00650000093048 CTD:4857 KO:K14944 UniGene:Rn.232418
IPI:IPI00556974 RefSeq:XP_001075031.1 RefSeq:XP_234098.2 SMR:D4AAF8
Ensembl:ENSRNOT00000050372 GeneID:298992 KEGG:rno:298992
NextBio:644625 Uniprot:D4AAF8
Length = 507
Score = 137 (53.3 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 95 DSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYL 154
D + S P+ KS P+ P++ S KI +PN G+IIGK G T+K +
Sbjct: 145 DRIKQTLPSSPTTTKSSPSD---PMT----TSRANQVKIIVPNSTAGLIIGKGGATVKAI 197
Query: 155 QLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGS--GIVAR 212
QSGA +Q+++ + +N R V + G PEQ KA +LI + E GS I
Sbjct: 198 MEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYA 256
Query: 213 RLTGQAGSDH 222
+TG + +
Sbjct: 257 NVTGPVANSN 266
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 45/154 (29%), Positives = 67/154 (43%)
Query: 158 SGAKIQVTRDTEADLNSPTRSVELMGTPE--QIAKAEQLINDVLAEAES-GGSGIVARRL 214
+ A + T +EA + T GT +A A N A S I+
Sbjct: 357 AAANLLATYASEASASGSTAG-GTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEK 415
Query: 215 TGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSTERTVQ 273
+ D + +P N VG ++GKGG+T+ Q TGARIQ+ PG + R V
Sbjct: 416 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG--TRNRKVT 473
Query: 274 IDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
I GT ++A+ L+ + I+ E +R NP G
Sbjct: 474 ITGTPAATQAAQYLITQRITYEQGVRAANPQKVG 507
Score = 120 (47.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
+PN+ GL+IGKGG T+K + ++GA +Q+ P G ER V + G EQ A +
Sbjct: 178 VPNSTAGLIIGKGGATVKAIMEQSGAWVQLS--QKPDGINLQERVVTVSGEPEQNRKAVE 235
Query: 287 LVNEVISEN 295
L+ + I E+
Sbjct: 236 LIIQKIQED 244
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 207 SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLH-LPPGD 265
+G R TG+ G + IP+ G +IGKGG+TI +Q TGA I++ PG
Sbjct: 36 AGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG- 94
Query: 266 TSTERTVQIDGTSEQIESAKQLVNEVISE 294
+TER I GT E + + + E I E
Sbjct: 95 -TTERVCLIQGTIEALNAVHGFIAEKIRE 122
Score = 90 (36.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
K+ IP+ G IIGK G+TI LQ ++GA I++++ + + R + GT E +
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 112
Query: 192 EQLINDVLAE 201
I + + E
Sbjct: 113 HGFIAEKIRE 122
Score = 40 (19.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 276 GTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQ 312
GT + + +K +V + EN + GG + YQ
Sbjct: 412 GTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQ 448
>UNIPROTKB|P04280 [details] [associations]
symbol:PRB1 "Basic salivary proline-rich protein 1"
species:9606 "Homo sapiens" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005576 "extracellular region" evidence=NAS] GO:GO:0005576
PIR:B40750 InterPro:IPR026086 PANTHER:PTHR23203 EMBL:K03204
EMBL:K03205 EMBL:K03206 EMBL:S52986 EMBL:M97220 EMBL:K02575
EMBL:K02576 EMBL:X07516 EMBL:X07517 EMBL:S62928 EMBL:S62941
IPI:IPI00023038 PIR:C38355 PIR:D40750 RefSeq:NP_005030.2
RefSeq:NP_955385.1 RefSeq:NP_955386.1 UniGene:Hs.631726
ProteinModelPortal:P04280 STRING:P04280 PhosphoSite:P04280
DMDM:52001469 PRIDE:P04280 GeneID:5542 KEGG:hsa:5542 CTD:5542
GeneCards:GC12M011504 HGNC:HGNC:9337 MIM:180989 neXtProt:NX_P04280
PharmGKB:PA33699 KO:K13911 GenomeRNAi:5542 NextBio:21470
ArrayExpress:P04280 CleanEx:HS_PRB1 Genevestigator:P04280
Uniprot:P04280
Length = 392
Score = 138 (53.6 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 46/132 (34%), Positives = 50/132 (37%)
Query: 480 GDSTQAPPPVQSSAAMGQQGYGTGQQPSP--NTASYPPQGATQPSYGVPPTSQSGYGSQV 537
G+ Q PPP QG + SP PPQG QP G PP G
Sbjct: 65 GNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQ-GPPPPPGKPQGP-- 121
Query: 538 PPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGG--YGQPGYSHSQP--PPSSYAQPD 593
PPQ G G P KP PP G QSP S G G P +QP PP P
Sbjct: 122 PPQGGNKPQGPPPPGKP-QGPPPQGDKSQSPRSPPGKPQGPPPQGGNQPQGPP-----PP 175
Query: 594 SGSQRAPPSNYG 605
G + PP G
Sbjct: 176 PGKPQGPPPQGG 187
Score = 133 (51.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 61/204 (29%), Positives = 73/204 (35%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQA--APYDQQQGYNSAAGYGNVNNT 467
G PP G QG G PQ Q+ +P + QG G
Sbjct: 177 GKPQGPPPQGGNKPQGPPPPGKPQGP--PPQGDKSQSPRSPPGKPQGPPPQGGNQPQGPP 234
Query: 468 SQEGHTPSYGAQGDST-QAPPPVQSSAAMGQQG--YGTGQQPSPNTASYPPQGATQPSYG 524
G QG + Q PPP QG + Q P PPQG QP G
Sbjct: 235 PPPGKPQGPPQQGGNRPQGPPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPPQGGNQPQ-G 293
Query: 525 VPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQ-QS----PGSAGGYGQPGY 579
PP G PPQ G G P KP PPA G ++ QS PG G Q
Sbjct: 294 PPPPPGKPQGP--PPQGGNKPQGPPPPGKP-QGPPAQGGSKSQSARAPPGKPQGPPQQEG 350
Query: 580 SHSQ-PPPSSYAQPDSGSQRAPPS 602
++ Q PPP + P +APP+
Sbjct: 351 NNPQGPPPPAGGNPQQ--PQAPPA 372
Score = 132 (51.5 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 62/206 (30%), Positives = 69/206 (33%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQA--APYDQQQGYNSAAGYGNVNNT 467
G PP G QG G PQ Q+ +P + QG G
Sbjct: 116 GKPQGPPPQGGNKPQGPPPPGKPQGP--PPQGDKSQSPRSPPGKPQGPPPQGGNQPQGPP 173
Query: 468 SQEGHTPSYGAQG-DSTQAPPPVQSSAAMGQQGYGTGQQP-SP--NTASYPPQGATQPSY 523
G QG + Q PPP QG Q P SP PPQG QP
Sbjct: 174 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG-DKSQSPRSPPGKPQGPPPQGGNQPQ- 231
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGG--YGQPGYSH 581
G PP G P Q G G P KP PP G +SP S G G P
Sbjct: 232 GPPPPPGKPQGP--PQQGGNRPQGPPPPGKP-QGPPPQGDKSRSPQSPPGKPQGPPPQGG 288
Query: 582 SQP--PPSSYAQPDSGSQRAPPSNYG 605
+QP PP P G + PP G
Sbjct: 289 NQPQGPP-----PPPGKPQGPPPQGG 309
Score = 126 (49.4 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 63/200 (31%), Positives = 73/200 (36%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP G QG D +P G Q P QG N G Q G P
Sbjct: 193 PPPPG-KPQGPPPQGDKSQSPRSPP-GKPQGPP---PQGGNQPQGPPPPPGKPQ-G-PPQ 245
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQG--YGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY 533
G G+ Q PPP QG + Q P PPQG QP G PP
Sbjct: 246 QG--GNRPQGPPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPPQGGNQPQ-GPPPPPGKPQ 302
Query: 534 GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQ-QS----PGSAGGYGQPGYSHSQ-PPPS 587
G PPQ G G P KP PPA G ++ QS PG G Q ++ Q PPP
Sbjct: 303 GP--PPQGGNKPQGPPPPGKP-QGPPAQGGSKSQSARAPPGKPQGPPQQEGNNPQGPPPP 359
Query: 588 SYAQPD------SGSQRAPP 601
+ P +G + PP
Sbjct: 360 AGGNPQQPQAPPAGQPQGPP 379
Score = 72 (30.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 25/69 (36%), Positives = 27/69 (39%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY-P 358
P G QG ++R P S PG P P G QP P P PP GG P
Sbjct: 74 PGKPQGPPPQGDKSRSPRS--PPGKPQGPPPQGGN-QPQG-PPPPPGKPQGPPPQGGNKP 129
Query: 359 SQPTPGGYP 367
P P G P
Sbjct: 130 QGPPPPGKP 138
Score = 68 (29.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 24/69 (34%), Positives = 27/69 (39%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY-P 358
P G QG +++ P S PG P P G QP P P PP GG P
Sbjct: 135 PGKPQGPPPQGDKSQSPRS--PPGKPQGPPPQGGN-QPQG-PPPPPGKPQGPPPQGGNKP 190
Query: 359 SQPTPGGYP 367
P P G P
Sbjct: 191 QGPPPPGKP 199
Score = 60 (26.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 26/72 (36%), Positives = 29/72 (40%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
+ P GG QG PP G P P Q G P + PG+ PQ PP GG
Sbjct: 119 QGPPPQGGNKPQG----PPPP-GKPQGPPPQ--GDKSQSPRSPPGK-PQ---GPPPQGGN 167
Query: 358 PSQ--PTPGGYP 367
Q P P G P
Sbjct: 168 QPQGPPPPPGKP 179
Score = 59 (25.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 26/72 (36%), Positives = 29/72 (40%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
+ P GG QG PP G P P Q G P + PG+ PQ PP GG
Sbjct: 58 QGPPPQGGNKPQG----PPPP-GKPQGPPPQ--GDKSRSPRSPPGK-PQ---GPPPQGGN 106
Query: 358 PSQ--PTPGGYP 367
Q P P G P
Sbjct: 107 QPQGPPPPPGKP 118
Score = 42 (19.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 13/33 (39%), Positives = 13/33 (39%)
Query: 337 PGAYPGQTPQYNMSQPPYGGYPSQPTPGGYPGN 369
P G PQ PP G P P P G GN
Sbjct: 39 PSPQGGNKPQ---GPPPPPGKPQGPPPQG--GN 66
>FB|FBgn0015907 [details] [associations]
symbol:bl "bancal" species:7227 "Drosophila melanogaster"
[GO:0030529 "ribonucleoprotein complex" evidence=ISS] [GO:0003729
"mRNA binding" evidence=NAS;TAS] [GO:0005634 "nucleus"
evidence=IC;IDA;TAS] [GO:0035062 "omega speckle" evidence=IDA]
[GO:0000785 "chromatin" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0045165 "cell fate commitment" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0007446 "imaginal disc growth"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0035107 "appendage morphogenesis" evidence=TAS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005737
GO:GO:0008283 GO:GO:0003729 GO:GO:0000785 GO:GO:0030529
GO:GO:0008134 GO:GO:0045165 GO:GO:0000381 GO:GO:0007446 HSSP:P61978
GO:GO:0035062 FlyBase:FBgn0015907 ChiTaRS:bl GO:GO:0035107
EMBL:AF275629 ProteinModelPortal:Q7KHL0 SMR:Q7KHL0 STRING:Q7KHL0
PRIDE:Q7KHL0 InParanoid:Q7KHL0 ArrayExpress:Q7KHL0 Bgee:Q7KHL0
Uniprot:Q7KHL0
Length = 508
Score = 94 (38.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 47/180 (26%), Positives = 70/180 (38%)
Query: 428 YAQDSYGGYHAPQSGYGQAAPYDQQQGYN-SAAGYGNVNNTSQEGHTPSY---GAQGDST 483
YA D YGGY +G G P Q+G N + G G V + G+ + GA+G++
Sbjct: 185 YA-DEYGGYG---TGSGSTRP--SQRGNNRNGGGAGGVAGGAAGGNGGGFNAGGARGNAG 238
Query: 484 QAPPPVQSSAAMGQQ--GYGTGQQPSPNTASYPPQGATQ-PSYGVPPTSQSGYGSQVPPQ 540
+ A G G G GQ+ +P + G +G + G G
Sbjct: 239 GRGGADRFGGAAGGAVAGAGMGQRDNPFINPWANGGGGDVDGFG---NNAGGAGGFAGNS 295
Query: 541 SGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAP 600
G G G P N G G++G +GQ ++S P S++Q G+ P
Sbjct: 296 FG-GGAGGPFGGGSFGNNGFGGGPSDFGGNSGNFGQAQGTNSLPSLGSFSQNQGGTSSLP 354
Score = 93 (37.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
I + G VIGKGG+ IK ++ R G R + ++ P ST+R VQ G Q+ A
Sbjct: 101 IHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAP--QSTDRVVQTVGKQSQVIEA-- 156
Query: 287 LVNEVISENR 296
V EVI+ R
Sbjct: 157 -VREVITLTR 165
Score = 85 (35.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
IP++ G VIGKGG+ I+ M+ + A + V P ERT+QI S IES +
Sbjct: 29 IPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGP------ERTIQI---SADIESTLE 79
Query: 287 LVNEVI 292
++ E++
Sbjct: 80 IITEML 85
Score = 65 (27.9 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 22/87 (25%), Positives = 39/87 (44%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
+I IP+ G +IGK G+ I+ ++ Q A + V D P R++++ I
Sbjct: 26 RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVD-----DSQGPERTIQISA---DIEST 77
Query: 192 EQLINDVLAEAESGGSGIVARRLTGQA 218
++I ++L E R L Q+
Sbjct: 78 LEIITEMLKYFEERDEDFDVRLLIHQS 104
Score = 58 (25.5 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 31/100 (31%), Positives = 38/100 (38%)
Query: 419 SGYNQQGQGY-AQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYG 477
SG Q QG + S G + Q G + P G N G G + N G G
Sbjct: 325 SGNFGQAQGTNSLPSLGSFSQNQGGTS-SLPSLGSFGQNPG-GPGGLGNGLSGGANGGVG 382
Query: 478 AQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQG 517
A G + A +A G G G SPN A+ PQG
Sbjct: 383 ALGGANGAGG---FNAVGGANG---GPNGSPNAATNVPQG 416
Score = 49 (22.3 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 36/180 (20%), Positives = 55/180 (30%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G ++P G N+ G G + G G+ G A +G +
Sbjct: 195 GSGSTRPSQRGNNRNGGGAGGVAGGAAGGNGGGFNAGGARGNAGGRGGADRFGGAAGGAV 254
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
G G Q D+ P G+G + A G +G
Sbjct: 255 AG--AGMG-QRDNPFINPWANGGGG-DVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFG 310
Query: 530 QSGYGSQVPPQSGYAG-YGMPQAQKPLANPPAYGQTQ-------------QSPGSAGGYG 575
+G+G G +G +G Q L + ++ Q Q Q+PG GG G
Sbjct: 311 NNGFGGGPSDFGGNSGNFGQAQGTNSLPSLGSFSQNQGGTSSLPSLGSFGQNPGGPGGLG 370
>UNIPROTKB|E2RG64 [details] [associations]
symbol:PCBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311 KO:K13162
CTD:57060 OMA:MSSSDAG EMBL:AAEX03012201 RefSeq:XP_849987.1
Ensembl:ENSCAFT00000015946 GeneID:476603 KEGG:cfa:476603
NextBio:20852230 Uniprot:E2RG64
Length = 403
Score = 160 (61.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 61/220 (27%), Positives = 100/220 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLI---- 195
VG IIGK GET+K ++ QS A+I ++ + P R + G+ + A +I
Sbjct: 29 VGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKL 83
Query: 196 NDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
++ L A + G + +T + IP ++ G +IGK G IK ++ TGA++Q
Sbjct: 84 DEDLCAAPANGGNVSRPPVT-------LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 256 VIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIR------NPAMAGGY--- 306
V LP STER V + G + I + + VI E+ + +P+++ G
Sbjct: 137 VAGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLL 193
Query: 307 -SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP 345
+ QG+ + TP + Q G+ P A P P
Sbjct: 194 SANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVP 233
Score = 105 (42.0 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGG--FDSADKGFSSPPSDLKSIPAPSAIP 118
+ KR EQ +AR+ S + +R GS F + DL A P
Sbjct: 38 ETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDL------CAAP 91
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
+ G + ++ IP + G +IGK+G IK ++ +GA++QV D NS R+
Sbjct: 92 ANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP--NSTERA 149
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGI 209
V + G P+ I + I V+ E+ G+ I
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESPPKGATI 180
Score = 87 (35.7 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 43/182 (23%), Positives = 70/182 (38%)
Query: 184 TPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETI 243
TP ++ K +QL + A S + Q S F +PN+ +G VIG+ G I
Sbjct: 209 TPAEVTKLQQLSGHAVPFASP--SMVPGLDPGAQTSSQEFL--VPNDLIGCVIGRQGSKI 264
Query: 244 KNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMA 303
++ +GA I++ + + ER V I G+ I A+ L+ + + +
Sbjct: 265 SEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTP 320
Query: 304 GGYSQQGYQARPPTSWGTPGAP-SMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPT 362
G P P AP + Y + + G P ++ PP P P
Sbjct: 321 GSAPTDLPAPFSPPLTALPTAPPGLLGTPYA-ISLSNFIGLKPVPFLALPPAS--PGPP- 376
Query: 363 PG 364
PG
Sbjct: 377 PG 378
>UNIPROTKB|P35637 [details] [associations]
symbol:FUS "RNA-binding protein FUS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0005737 GO:GO:0005654 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0008219 GO:GO:0008270 Reactome:REACT_1675
Gene3D:3.30.70.330 GO:GO:0003723 Orphanet:803 GO:GO:0000398
EMBL:AJ295163 MIM:612160 eggNOG:NOG240581 KO:K13098 Orphanet:275872
Orphanet:79105 EMBL:S62138 PIR:S33798 HOGENOM:HOG000038010 CTD:2521
ChiTaRS:FUS OrthoDB:EOG4DV5NH EMBL:S62140 EMBL:X71427 EMBL:X71428
EMBL:AF071213 EMBL:AC009088 EMBL:BC000402 EMBL:BC002459
IPI:IPI00221354 IPI:IPI00260715 PIR:S33799 RefSeq:NP_001164105.1
RefSeq:NP_004951.1 UniGene:Hs.46894 PDB:2LA6 PDB:2LCW PDB:4FDD
PDBsum:2LA6 PDBsum:2LCW PDBsum:4FDD ProteinModelPortal:P35637
SMR:P35637 DIP:DIP-29857N IntAct:P35637 MINT:MINT-5005976
STRING:P35637 PhosphoSite:P35637 DMDM:544357 PaxDb:P35637
PRIDE:P35637 DNASU:2521 Ensembl:ENST00000254108
Ensembl:ENST00000380244 GeneID:2521 KEGG:hsa:2521 UCSC:uc002ebe.2
UCSC:uc002ebh.3 GeneCards:GC16P031191 HGNC:HGNC:4010 HPA:HPA008784
MIM:137070 MIM:608030 MIM:614782 neXtProt:NX_P35637 Orphanet:99967
PharmGKB:PA28425 HOVERGEN:HBG095056 InParanoid:P35637 OMA:YGTQSTP
PhylomeDB:P35637 GenomeRNAi:2521 NextBio:9927 ArrayExpress:P35637
Bgee:P35637 CleanEx:HS_FUS Genevestigator:P35637
GermOnline:ENSG00000089280 Uniprot:P35637
Length = 526
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 58/149 (38%), Positives = 75/149 (50%)
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYG 524
N+ +Q+ T SYGA QSS GQQ Y +G S +T+ Y ++ SYG
Sbjct: 4 NDYTQQA-TQSYGAYPTQPGQGYSQQSSQPYGQQSY-SGYSQSTDTSGYGQ--SSYSSYG 59
Query: 525 VPPTSQSGYGSQVPPQSGYA---GYGMPQAQKPL----ANPPAYGQTQQSPGS-AGGYGQ 576
+ +GYG+Q PQ GY GYG Q+ + ++ P YGQ Q +P S +G YG
Sbjct: 60 --QSQNTGYGTQSTPQ-GYGSTGGYGSSQSSQSSYGQQSSYPGYGQ-QPAPSSTSGSYG- 114
Query: 577 PGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
S SQ SSY QP SGS PS YG
Sbjct: 115 ---SSSQS--SSYGQPQSGSYSQQPS-YG 137
Score = 156 (60.0 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 57/167 (34%), Positives = 68/167 (40%)
Query: 443 YGQAAPYDQQQG-YNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYG 501
Y Q A Q G Y + G G +SQ SY ST QSS + YG
Sbjct: 6 YTQQAT--QSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYS----SYG 59
Query: 502 TGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAY 561
Q T S P + YG +SQS YG Q S Y GYG A P + +Y
Sbjct: 60 QSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQ----SSYPGYGQQPA--PSSTSGSY 113
Query: 562 GQTQQSPGSAGGYGQP-GYSHSQPPPSSYAQPDSGSQRA--PPSNYG 605
G + QS YGQP S+SQ P Q G Q++ PP YG
Sbjct: 114 GSSSQS----SSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYG 156
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 71/293 (24%), Positives = 88/293 (30%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGY-GYVQP---GAYPGQTPQYNMSQPPYGGYPSQPT 362
S Y +P + + Q Y GY Q Y GQ+ + Q GY +Q T
Sbjct: 13 SYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGY-GQSSYSSYGQSQNTGYGTQST 71
Query: 363 PGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYN 422
P GY SY QP + Y+
Sbjct: 72 PQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYS 131
Query: 423 QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNN-TSQEGHTPSYGAQGD 481
QQ SYGG Q YGQ QQ YN GYG N S G G G+
Sbjct: 132 QQ------PSYGGQ---QQSYGQ------QQSYNPPQGYGQQNQYNSSSGGGGGGGGGGN 176
Query: 482 STQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQS 541
Q + S G GYG Q + G Q G SG G
Sbjct: 177 YGQDQSSMSSGGGSGG-GYGNQDQSGGGGSG----GYGQQDRGGRGRGGSGGGGG----G 227
Query: 542 GYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDS 594
G GY P G + G GG + G++ P ++ DS
Sbjct: 228 GGGGYNRSSGGY---EPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDS 277
>UNIPROTKB|H3BPE7 [details] [associations]
symbol:FUS "RNA-binding protein FUS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
ChiTaRS:FUS EMBL:AC009088 HGNC:HGNC:4010 ProteinModelPortal:H3BPE7
SMR:H3BPE7 Ensembl:ENST00000568685 Bgee:H3BPE7 Uniprot:H3BPE7
Length = 527
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 58/149 (38%), Positives = 75/149 (50%)
Query: 465 NNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYG 524
N+ +Q+ T SYGA QSS GQQ Y +G S +T+ Y ++ SYG
Sbjct: 4 NDYTQQA-TQSYGAYPTQPGQGYSQQSSQPYGQQSY-SGYSQSTDTSGYGQ--SSYSSYG 59
Query: 525 VPPTSQSGYGSQVPPQSGYA---GYGMPQAQKPL----ANPPAYGQTQQSPGS-AGGYGQ 576
+ +GYG+Q PQ GY GYG Q+ + ++ P YGQ Q +P S +G YG
Sbjct: 60 --QSQNTGYGTQSTPQ-GYGSTGGYGSSQSSQSSYGQQSSYPGYGQ-QPAPSSTSGSYG- 114
Query: 577 PGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
S SQ SSY QP SGS PS YG
Sbjct: 115 ---SSSQS--SSYGQPQSGSYSQQPS-YG 137
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 73/302 (24%), Positives = 91/302 (30%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGY-GYVQP---GAYPGQTPQYNMSQPPYGGYPSQPT 362
S Y +P + + Q Y GY Q Y GQ+ + Q GY +Q T
Sbjct: 13 SYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGY-GQSSYSSYGQSQNTGYGTQST 71
Query: 363 PGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYN 422
P GY SY QP + Y+
Sbjct: 72 PQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYS 131
Query: 423 QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNN-TSQEGHTPSYGAQGD 481
QQ SYGG Q YGQ QQ YN GYG N S G G G+
Sbjct: 132 QQ------PSYGGQ---QQSYGQ------QQSYNPPQGYGQQNQYNSSSGGGGGGGGGGN 176
Query: 482 STQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQS 541
Q + S G GYG Q + G Q G SG G
Sbjct: 177 YGQDQSSMSSGGGSGG-GYGNQDQSGGGGSG----GYGQQDRGGRGRGGSGGGGG----G 227
Query: 542 GYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPP 601
G GY P G + G GG + G++ P ++ DS Q
Sbjct: 228 GGGGYNRSSGGY---EPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSAEQDNSD 284
Query: 602 SN 603
+N
Sbjct: 285 NN 286
>UNIPROTKB|I3LRN5 [details] [associations]
symbol:PCBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074311 OMA:MSSSDAG
EMBL:FP102591 Ensembl:ENSSSCT00000026653 Uniprot:I3LRN5
Length = 404
Score = 160 (61.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 61/220 (27%), Positives = 100/220 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLI---- 195
VG IIGK GET+K ++ QS A+I ++ + P R + G+ + A +I
Sbjct: 29 VGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKL 83
Query: 196 NDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
++ L A + G + +T + IP ++ G +IGK G IK ++ TGA++Q
Sbjct: 84 DEDLCAAPANGGNVSRPPVT-------LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 256 VIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIR------NPAMAGGY--- 306
V LP STER V + G + I + + VI E+ + +P+++ G
Sbjct: 137 VAGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLL 193
Query: 307 -SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP 345
+ QG+ + TP + Q G+ P A P P
Sbjct: 194 STNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVP 233
Score = 105 (42.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGG--FDSADKGFSSPPSDLKSIPAPSAIP 118
+ KR EQ +AR+ S + +R GS F + DL A P
Sbjct: 38 ETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDL------CAAP 91
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
+ G + ++ IP + G +IGK+G IK ++ +GA++QV D NS R+
Sbjct: 92 ANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP--NSTERA 149
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGI 209
V + G P+ I + I V+ E+ G+ I
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESPPKGATI 180
Score = 87 (35.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 47/178 (26%), Positives = 73/178 (41%)
Query: 184 TPEQIAKAEQLINDVLAEAESGGSGIVARRLTG-QAGSDHFAMKIPNNKVGLVIGKGGET 242
TP ++ K +QL + A S + A G Q S F +PN+ +G VIG+ G
Sbjct: 209 TPAEVTKLQQLSGHAVPFASP--SMVPAGLDPGTQTSSQEFL--VPNDLIGCVIGRQGSK 264
Query: 243 IKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRN--- 299
I ++ +GA I++ + + ER V I G+ I A+ L+ + + +
Sbjct: 265 ISEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGT 320
Query: 300 PAMA-----GGYSQQ--GYQARPPTSWGTPGAPSMQ-----QPGYGYVQPGAYPGQTP 345
P+ A +S PP GTP A S+ +P P A PG P
Sbjct: 321 PSSAPTDLPAPFSPPLTALPTAPPGLLGTPYAISLSNFIGLKPVPFLALPPASPGPPP 378
>RGD|1307910 [details] [associations]
symbol:Pcbp4 "poly(rC) binding protein 4" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA;ISO] [GO:0006977
"DNA damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=ISO] [GO:0007050 "cell
cycle arrest" evidence=ISO] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1307910 GO:GO:0003723
GeneTree:ENSGT00550000074311 KO:K13162 CTD:57060 OMA:MSSSDAG
OrthoDB:EOG48D0VR IPI:IPI00366708 RefSeq:NP_001178812.1
UniGene:Rn.40405 Ensembl:ENSRNOT00000017139 GeneID:363133
KEGG:rno:363133 UCSC:RGD:1307910 NextBio:682555 Uniprot:D3ZCS3
Length = 403
Score = 159 (61.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 64/221 (28%), Positives = 101/221 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLI---- 195
VG IIGK GET+K ++ QS A+I ++ + P R + G+ + A +I
Sbjct: 29 VGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKL 83
Query: 196 -NDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
D+ A +GGS V+R + IP ++ G +IGK G IK ++ TGA++
Sbjct: 84 DEDLCAAPANGGS--VSRPPVT------LRLVIPASQCGSLIGKAGTKIKEIRETTGAQV 135
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIR------NPAMAGGY-- 306
QV LP STER V + G + I + + VI E+ + +P+++ G
Sbjct: 136 QVAGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVL 192
Query: 307 --SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP 345
+ QG+ + TP + Q G+ P A P P
Sbjct: 193 LSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVP 233
Score = 105 (42.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGG--FDSADKGFSSPPSDLKSIPAPSAIP 118
+ KR EQ +AR+ S + +R GS F + DL A P
Sbjct: 38 ETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDL------CAAP 91
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
+ G + ++ IP + G +IGK+G IK ++ +GA++QV D NS R+
Sbjct: 92 ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP--NSTERA 149
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGI 209
V + G P+ I + I V+ E+ G+ I
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESPPKGATI 180
Score = 88 (36.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 43/182 (23%), Positives = 71/182 (39%)
Query: 184 TPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETI 243
TP ++ K +QL + A S + + Q S F +PN+ +G VIG+ G I
Sbjct: 209 TPAEVTKLQQLSGHAVPFASP--SVVPGLDPSTQTSSQEFL--VPNDLIGCVIGRQGSKI 264
Query: 244 KNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMA 303
++ +GA I++ + + ER V I G+ I A+ L+ + + +
Sbjct: 265 SEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTP 320
Query: 304 GGYSQQGYQARPPTSWGTPGAP-SMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPT 362
G P P AP + Y + + G P ++ PP P P
Sbjct: 321 GSAPADLPTPFSPPLTALPTAPPGLLGTPYA-ISLSNFIGLKPVPFLALPPAS--PGPP- 376
Query: 363 PG 364
PG
Sbjct: 377 PG 378
>MGI|MGI:107708 [details] [associations]
symbol:Ss18 "synovial sarcoma translocation, Chromosome 18"
species:10090 "Mus musculus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IDA] [GO:0000902 "cell morphogenesis"
evidence=IGI;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=ISO] [GO:0042493 "response to drug"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IDA] MGI:MGI:107708
GO:GO:0005634 GO:GO:0000226 GO:GO:0042493 GO:GO:0045944
GO:GO:0007243 GO:GO:0006351 GO:GO:0000902 GO:GO:0048013
GO:GO:0005881 GO:GO:0030374 GeneTree:ENSGT00500000044808
HOGENOM:HOG000048717 HOVERGEN:HBG003892 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 CTD:6760 eggNOG:NOG274014 KO:K15623
OrthoDB:EOG4RFKTH EMBL:X93357 EMBL:AY055726 EMBL:AK166053
IPI:IPI00123532 RefSeq:NP_033306.2 UniGene:Mm.31761
ProteinModelPortal:Q62280 IntAct:Q62280 STRING:Q62280
PhosphoSite:Q62280 PRIDE:Q62280 Ensembl:ENSMUST00000040924
GeneID:268996 KEGG:mmu:268996 InParanoid:Q3TM96 OMA:IQCIMDS
NextBio:392632 Bgee:Q62280 CleanEx:MM_SS18 Genevestigator:Q62280
GermOnline:ENSMUSG00000037013 Uniprot:Q62280
Length = 418
Score = 159 (61.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 64/172 (37%), Positives = 71/172 (41%)
Query: 411 YSYS-QPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
YS+ Q P G NQQ Y D + Y GY Q P +QGY+ Y + +
Sbjct: 275 YSHGGQGPPEGMNQQ---YYPDGHNDY-----GYQQ--PSYPEQGYDRP--YEDSSQHYY 322
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
EG YG Q D+ Q PPP QQGY QQ P YP Q Q SYG P S
Sbjct: 323 EGGNSQYGQQQDAYQGPPP--------QQGYPPQQQQYPGQQGYPGQ---QQSYG--P-S 368
Query: 530 QSGYGSQVP--PQS-G--YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ 576
Q G G Q P PQ G Y GY Q P PP G G Y Q
Sbjct: 369 QGGPGPQYPNYPQGQGQQYGGYRPTQPGPP--QPPQQRPYGYDQGQYGNYQQ 418
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 53/193 (27%), Positives = 63/193 (32%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP +N G H GQ + ++ N+S + S
Sbjct: 97 PPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPSQLSMTNSSMNMPSSS 156
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-----PSPNTASYPPQGAT---QP---SYG 524
+G+ G + P QS Q GQ P PN P QG QP Y
Sbjct: 157 HGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYN 216
Query: 525 VPPTSQSGYGSQVPPQS--GYAGYG---MPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
+PP Y Q P G G M Q Q P PP G QQ G YG Y
Sbjct: 217 MPPGGAQHYQGQQAPMGLMGQVNQGSHMMGQRQMPPYRPPQQGPPQQYSGQEDYYGDQ-Y 275
Query: 580 SHS-QPPPSSYAQ 591
SH Q PP Q
Sbjct: 276 SHGGQGPPEGMNQ 288
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 65/218 (29%), Positives = 74/218 (33%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE-- 470
+ QPP+ YN G AQ Y G AP GQ G Y +
Sbjct: 207 HQQPPSQQYNMPPGG-AQH-YQGQQAPMGLMGQVNQGSHMMGQRQMPPYRPPQQGPPQQY 264
Query: 471 -GHTPSYGAQ-GDSTQAPPPVQSSAAM--GQQGYGTGQQPSPNTASYPPQGATQP----S 522
G YG Q Q PP + G YG QQPS YP QG +P S
Sbjct: 265 SGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY-QQPS-----YPEQGYDRPYEDSS 318
Query: 523 YGVPPTSQSGYGSQV------PPQSGYAGYGM--PQAQKPLANPPAYGQTQQSPGSA--- 571
S YG Q PPQ GY P Q +YG +Q PG
Sbjct: 319 QHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQSYGPSQGGPGPQYPN 378
Query: 572 --GGYGQP--GYSHSQP-PPSSYAQPDSGSQRAPPSNY 604
G GQ GY +QP PP Q G + NY
Sbjct: 379 YPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNY 416
>MGI|MGI:1890359 [details] [associations]
symbol:Igf2bp3 "insulin-like growth factor 2 mRNA binding
protein 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730
"mRNA 3'-UTR binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0048027 "mRNA 5'-UTR
binding" evidence=ISO] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
MGI:MGI:1890359 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048027 GO:GO:0003730
HSSP:Q9Y6M1 HOVERGEN:HBG052725 KO:K13197 eggNOG:NOG249985
GeneTree:ENSGT00530000063171 HOGENOM:HOG000000675 OrthoDB:EOG405S0T
CTD:10643 OMA:EAQDTKF ChiTaRS:Igf2bp3 EMBL:AK088465 EMBL:AK011689
EMBL:AK147140 EMBL:BC045138 EMBL:BC049082 IPI:IPI00331315
RefSeq:NP_076159.3 UniGene:Mm.281018 ProteinModelPortal:Q9CPN8
SMR:Q9CPN8 STRING:Q9CPN8 PhosphoSite:Q9CPN8 PaxDb:Q9CPN8
PRIDE:Q9CPN8 Ensembl:ENSMUST00000031838 GeneID:140488
KEGG:mmu:140488 UCSC:uc009bwi.2 InParanoid:Q9CPN8 NextBio:369800
Bgee:Q9CPN8 Genevestigator:Q9CPN8 Uniprot:Q9CPN8
Length = 579
Score = 161 (61.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 54/182 (29%), Positives = 92/182 (50%)
Query: 114 PSAIPVSYGGYQSMGTSK-KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADL 172
PS + Y ++ T + IP + VG IIGK G+ IK L +GA I++ EA
Sbjct: 390 PSTLTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIA-PAEAP- 447
Query: 173 NSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKV 232
++ R V + G PE KA+ I + E E+ S +L H +++P+
Sbjct: 448 DAKVRMVIITGPPEAQFKAQGRIYGKIKE-ENFVSPKEEVKLEA-----H--IRVPSFAA 499
Query: 233 GLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVI 292
G VIGKGG+T+ +Q+ + A + V+P P D + + V+I G + A++ + E++
Sbjct: 500 GRVIGKGGKTVNELQSLSSAEV-VVPRDQTP-DENDQVVVKITGHFYACQVAQRKIQEIL 557
Query: 293 SE 294
++
Sbjct: 558 TQ 559
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 60/214 (28%), Positives = 100/214 (46%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
++ +P VG IIGK G TI+ + Q+ +KI V R + + + +S+ ++ TPE + A
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR--KENTGAAEKSITILSTPEGTSAA 256
Query: 192 EQLINDVL-AEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQA 248
+ I +++ EA+ + T + +KI NN VG +IGK G +K ++
Sbjct: 257 CKSILEIMHKEAQD-------IKFT-----EEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE---NRIRNPAMAG- 304
T +I + PL + ERT+ + G+ E A++ + + I E N I + +
Sbjct: 305 DTDTKITISPLQ-ELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNLQAH 363
Query: 305 ---GYSQQGYQARPPTSWGTP---GAPSMQQPGY 332
G + PPTS P G PS P Y
Sbjct: 364 LIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY 397
>RGD|1305614 [details] [associations]
symbol:Igf2bp2 "insulin-like growth factor 2 mRNA binding
protein 2" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005856
"cytoskeleton" evidence=ISO] [GO:0044430 "cytoskeletal part"
evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 RGD:1305614
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048027 GO:GO:0003730 EMBL:CH473999
GeneTree:ENSGT00530000063171 CTD:10644 OrthoDB:EOG4FBHSJ
GO:GO:0044430 IPI:IPI00559516 RefSeq:NP_001257527.1
UniGene:Rn.17318 Ensembl:ENSRNOT00000036958 GeneID:303824
KEGG:rno:303824 UCSC:RGD:1305614 NextBio:652153 Uniprot:D3ZWZ6
Length = 592
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 77/311 (24%), Positives = 137/311 (44%)
Query: 78 VSAEAKRPRVENGSGG-FDSADKGFSSPPSDLKSIPAPSAIPVSYG-GYQSMGTSKKIE- 134
++ E + +E SG F+ S P + S P+P G G S +++I+
Sbjct: 128 MTREEAKVAIEKLSGHQFEDYSFKISYIPDEELSSPSPPHRAREQGHGPGSSSQARQIDF 187
Query: 135 -----IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIA 189
+P VG IIGK G TIK + Q+ +++ + R + + + V + TPE +
Sbjct: 188 PLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTS 245
Query: 190 KAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQ 247
+A ++I +++ + E+ + + ++ +KI N VG +IGK G +K ++
Sbjct: 246 EACRMILEIM-QKEADETKL----------AEEVPLKILAHNGFVGRLIGKEGRNLKKIE 294
Query: 248 ARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLV---------NEVISENRIR 298
TG +I + L + ERT+ + GT E SA+ + N++++ N+
Sbjct: 295 HETGTKITISSLQ-DLSIYNPERTITVKGTIEACASAEMEIMKKLREAFENDMLAVNQQA 353
Query: 299 N--PAM---AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQTPQYNMSQ- 351
N P + A G G PP + G GAP P + + G + P ++
Sbjct: 354 NLIPGLNLSALGIFSTGLSVLPPPA-GPRGAPP-SPPYHPFATHSGYFSSLYPHHHFGPF 411
Query: 352 PPYGGYPSQPT 362
P + YP Q T
Sbjct: 412 PHHHSYPEQET 422
Score = 149 (57.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 50/160 (31%), Positives = 81/160 (50%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
IP VG IIGK G IK L +GA I++ D++ R V + G PE KA+
Sbjct: 427 IPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSE--RMVIITGPPEAQFKAQGR 484
Query: 195 INDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
I L E E+ + +L H +++P++ G VIGKGG+T+ +Q T A +
Sbjct: 485 IFGKLKE-ENFFNPKEEVKLEA-----H--IRVPSSTAGRVIGKGGKTVNELQNLTSAEV 536
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
++P P D + E V+I G ++A++ + E++ +
Sbjct: 537 -IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 574
>ZFIN|ZDB-GENE-030131-4487 [details] [associations]
symbol:sec24c "SEC24 family, member C (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0030127 "COPII vesicle
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
ZFIN:ZDB-GENE-030131-4487 GO:GO:0006886 GO:GO:0008270
InterPro:IPR007123 Pfam:PF00626 GO:GO:0006888 GO:GO:0030127
SUPFAM:SSF82919 InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811
GeneTree:ENSGT00590000082962 EMBL:CU469520 EMBL:CU694198
IPI:IPI00972073 Ensembl:ENSDART00000085476 ArrayExpress:F1R9P2
Bgee:F1R9P2 Uniprot:F1R9P2
Length = 1241
Score = 165 (63.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 76/220 (34%), Positives = 88/220 (40%)
Query: 410 GYS-YSQPPASGYNQQG-QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNT 467
GY Y QP Y Q G Q Y Q YGG H P + Q AP D G +GY
Sbjct: 19 GYQRYPQPGYQRYPQPGYQRYPQPGYGGGHVPSAYPAQYAP-DNGPG----SGY------ 67
Query: 468 SQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-PSPNTASYPPQGATQPSYGVP 526
Q+G P G + T PPV + + Q G G Q P P A PPQG T S
Sbjct: 68 -QQG--PPQGMREPPTSGTPPVSGAQSYSQFGQGETQNGPPPMVA--PPQG-TLVSQPHT 121
Query: 527 PTSQSGYGSQVPP---QSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG----- 578
P + S G PP Q G GM Q +A+ G T SP G Y P
Sbjct: 122 PNAVSLSGPTQPPYGQQFGSPPIGMQQMTNQMASMQV-GSTAPSPAGPG-YAPPSTAQAP 179
Query: 579 ----YSHSQPP---PSSYAQ----PDSGSQRAPPSNY-GA 606
Y+ S PP P+S A P +APP Y GA
Sbjct: 180 ISAAYTPSAPPTFPPTSSAPSQPPPTEAVAQAPPQPYYGA 219
Score = 144 (55.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 66/213 (30%), Positives = 81/213 (38%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTSQEG 471
Y + P GY Q Y Q YGG H P + Q AP + GY G + G
Sbjct: 28 YQRYPQPGY----QRYPQPGYGGGHVPSAYPAQYAPDNGPGSGYQQGPPQG-MREPPTSG 82
Query: 472 HTPSYGAQ-------GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYG 524
P GAQ G++ PPP+ + QG Q +PN S G TQP YG
Sbjct: 83 TPPVSGAQSYSQFGQGETQNGPPPMVAPP----QGTLVSQPHTPNAVSL--SGPTQPPYG 136
Query: 525 V----PP------TSQSG---YGSQVPPQSGYAGYGMPQ-AQKPL--ANPPAYGQTQQSP 568
PP T+Q GS P +G GY P AQ P+ A P+ T
Sbjct: 137 QQFGSPPIGMQQMTNQMASMQVGSTAPSPAG-PGYAPPSTAQAPISAAYTPSAPPTFPPT 195
Query: 569 GSAGGYGQPGYSHSQPPPSSY-AQPDSGSQRAP 600
SA P + +Q PP Y P Q P
Sbjct: 196 SSAPSQPPPTEAVAQAPPQPYYGAPPPAQQPFP 228
Score = 142 (55.0 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 71/205 (34%), Positives = 83/205 (40%)
Query: 415 QPP-ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAPYDQQQGYN-----SA--AGYGNVN 465
QP AS Y Q GY + GY PQ GY Q P Q GY SA A Y N
Sbjct: 6 QPHMASPYGQPQPGYQRYPQPGYQRYPQPGY-QRYP---QPGYGGGHVPSAYPAQYAPDN 61
Query: 466 NTS---QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-PSPNTASYPPQGATQP 521
Q+G P G + T PPV + + Q G G Q P P A PPQG T
Sbjct: 62 GPGSGYQQG--PPQGMREPPTSGTPPVSGAQSYSQFGQGETQNGPPPMVA--PPQG-TLV 116
Query: 522 SYGVPPTSQSGYGSQVPP---QSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
S P + S G PP Q G GM Q +A+ G T SP G Y P
Sbjct: 117 SQPHTPNAVSLSGPTQPPYGQQFGSPPIGMQQMTNQMASMQV-GSTAPSPAGPG-YAPP- 173
Query: 579 YSHSQPPPSSYAQPDSGSQRAPPSN 603
S +Q P S+ P S PP++
Sbjct: 174 -STAQAPISAAYTP-SAPPTFPPTS 196
Score = 126 (49.4 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 55/204 (26%), Positives = 78/204 (38%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
Y+ S PP + AP Y A P QQ N+ + + + T +
Sbjct: 184 YTPSAPPTFPPTSSAPSQPPPTEAVAQAPPQPYYGAPPPAQQPFPNAVSTFSSAGPTQPQ 243
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYG-VP-PT 528
PS Q QAP A+ Q + T P P+ + P TQPS+ P PT
Sbjct: 244 A-PPSVSQQS-FPQAP-------AVSQPPFSTAPPPGPSQSYGGPLPPTQPSFQRAPLPT 294
Query: 529 SQSG-YGSQVPPQSGYAGYGMPQA-QKPLANP-PAYGQ----TQQSPGSAGGYGQPGYSH 581
SQ G + PP S ++ P Q P++ P P Y + T P G +P +
Sbjct: 295 SQPGVFPGGPPPTSTHSQLPGPMPPQPPVSQPSPYYSEPPPTTASFPPQVGAPPRPPLAG 354
Query: 582 SQPPPSSYAQPDSGSQRAPPSNYG 605
Q PP + P S P ++ G
Sbjct: 355 MQGPPMASQGPLMASHGPPGASQG 378
Score = 112 (44.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 52/152 (34%), Positives = 63/152 (41%)
Query: 467 TSQEGHTPSYGAQGDST--QAPPPVQSSAAMGQQG-YGTGQQPSPNTASYPPQGATQPSY 523
TSQ G P G ST Q P P+ + Q Y + +P P TAS+PPQ P
Sbjct: 294 TSQPGVFPG-GPPPTSTHSQLPGPMPPQPPVSQPSPYYS--EPPPTTASFPPQVGAPPR- 349
Query: 524 GVPPTSQSGYGSQVPPQSGY----AGYGMPQAQK--PLANP-PAYGQTQQSPGSAGGY-- 574
PP + G Q PP + A +G P A + P+ + P Q P S G
Sbjct: 350 --PPLA----GMQGPPMASQGPLMASHGPPGASQGPPMQSQGPPMAQVNHVPPSQPGMPP 403
Query: 575 GQPGYSHSQPPPSSYAQPDSGSQRAPPSNYGA 606
G S S PPP QP G Q PP GA
Sbjct: 404 GPINASLSGPPP----QP--GMQGYPPQQNGA 429
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 52/196 (26%), Positives = 67/196 (34%)
Query: 416 PPASGYNQQGQGYAQDS-YGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTP 474
PP +Q Y++ PQ G P QG A G + H P
Sbjct: 318 PPQPPVSQPSPYYSEPPPTTASFPPQVGAPPRPPLAGMQG-PPMASQGPL----MASHGP 372
Query: 475 SYGAQGD--STQAPPPVQSSAAMGQQGYGTGQQPSPNTASY---PPQGATQPSYGVPPTS 529
+QG +Q PP Q + Q G P P AS PPQ Q G PP
Sbjct: 373 PGASQGPPMQSQGPPMAQVNHVPPSQ---PGMPPGPINASLSGPPPQPGMQ---GYPPQQ 426
Query: 530 QSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSY 589
+G PQ GYA P P + P YG +P A + S P P
Sbjct: 427 NGAFGQVRGPQPGYAA---P----PYSGQPNYGAPPAAPAPAPAAPKRLDPDSIPSPIQV 479
Query: 590 AQPDSGSQRAPPSNYG 605
+ D ++ + P G
Sbjct: 480 IEDDKANKGSQPFTTG 495
Score = 78 (32.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 23/64 (35%), Positives = 27/64 (42%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYG-YVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG 365
+QQ + A P PG QPGY Y QPG P Y P YP+Q P
Sbjct: 4 NQQPHMASP-YGQPQPGYQRYPQPGYQRYPQPGYQRYPQPGYGGGHVP-SAYPAQYAPDN 61
Query: 366 YPGN 369
PG+
Sbjct: 62 GPGS 65
Score = 74 (31.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/66 (45%), Positives = 31/66 (46%)
Query: 305 GYSQ---QGYQARPPTSWGTP---GAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYP 358
GY Q QG + PPTS GTP GA S Q G G Q G P M PP G
Sbjct: 66 GYQQGPPQGMR-EPPTS-GTPPVSGAQSYSQFGQGETQNGPPP-------MVAPPQGTLV 116
Query: 359 SQP-TP 363
SQP TP
Sbjct: 117 SQPHTP 122
Score = 74 (31.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/63 (36%), Positives = 27/63 (42%)
Query: 306 YSQQGYQARPPTSWG---TPGA-PSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP 361
Y Q GYQ P +G P A P+ P G PG+ Q P M +PP G P P
Sbjct: 31 YPQPGYQRYPQPGYGGGHVPSAYPAQYAPDNG---PGSGYQQGPPQGMREPPTSGTP--P 85
Query: 362 TPG 364
G
Sbjct: 86 VSG 88
Score = 65 (27.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 312 QARPPTSWGT-PGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPP-YGGYPSQPTPGGYPG 368
QA P S + P AP++ QP + P PG + Y PP + P P PG
Sbjct: 243 QAPPSVSQQSFPQAPAVSQPPFSTAPP---PGPSQSYGGPLPPTQPSFQRAPLPTSQPG 298
Score = 57 (25.1 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 16/43 (37%), Positives = 17/43 (39%)
Query: 324 APSMQQPGYGYVQPGAYP---GQTPQYNMSQPPYGGYPSQPTP 363
APS PGY P TP + PP PSQP P
Sbjct: 162 APSPAGPGYAPPSTAQAPISAAYTPSAPPTFPPTSSAPSQPPP 204
Score = 51 (23.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 21/72 (29%), Positives = 26/72 (36%)
Query: 297 IRNPAMAGGYSQQGYQARPPTSWGTP--GAPSMQQPGYGYV--QPGAYPGQTPQYNMSQP 352
+R P +G G Q+ G G P M P G + QP P +QP
Sbjct: 75 MREPPTSGTPPVSGAQSYSQFGQGETQNGPPPMVAPPQGTLVSQPHT-PNAVSLSGPTQP 133
Query: 353 PYGGYPSQPTPG 364
PYG P G
Sbjct: 134 PYGQQFGSPPIG 145
>UNIPROTKB|E2RSH9 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 OMA:GSQYGPQ Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:AAEX03001719 Ensembl:ENSCAFT00000019631 Uniprot:E2RSH9
Length = 2286
Score = 155 (59.6 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 70/200 (35%), Positives = 82/200 (41%)
Query: 410 GYSYSQPPASGYNQQG-QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
G SY+Q Y QQG GY Q Y Y Q +P+ QQQ Y S
Sbjct: 445 GLSYAQQ-IPPYGQQGPSGYGQQGQTPY------YNQQSPHPQQQ----QPPYSQ-QPPS 492
Query: 469 QEGHT-PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPS--PNTASYPPQGATQPSYGV 525
Q H PSY Q S PP +Q+S Q Y QQPS P+ S P + QP+
Sbjct: 493 QNPHAQPSYQQQPQSQ--PPQLQAS----QPPYS--QQPSQPPHQQSPTPYPSQQPTTQQ 544
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQ--AQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
P SQ Y SQ QS Y PQ A L+ AY Q Q Y Q +
Sbjct: 545 HPQSQPPY-SQPQAQSPYQQQ-QPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRF---- 598
Query: 584 PPPSSYAQPDSGSQRAP-PS 602
PPP +Q GSQ + PS
Sbjct: 599 PPPQELSQDSFGSQASSAPS 618
Score = 147 (56.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 64/203 (31%), Positives = 78/203 (38%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
YS Q P+SG QQG GY YG PQ Y A Q + + Q+
Sbjct: 402 YSQQQGPSSG-PQQGHGYPGQPYGS-QTPQR-YPMAMQGRAQSAMGGLSYAQQIPPYGQQ 458
Query: 471 GHTPS-YGAQGDST----QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGV 525
G PS YG QG + Q+P P Q QQ P+ P Q
Sbjct: 459 G--PSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQNPHAQPSYQQQPQSQPPQLQASQ 516
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQA---QKPLANPPAYGQTQ-QSPGSAGGYGQPGYSH 581
PP SQ SQ P Q Y Q Q P + PP Y Q Q QSP QP S
Sbjct: 517 PPYSQQP--SQPPHQQSPTPYPSQQPTTQQHPQSQPP-YSQPQAQSPYQQQQPQQPA-SS 572
Query: 582 SQPPPSSYAQPDSGSQRAPPSNY 604
+ ++Y QP S Q++ + Y
Sbjct: 573 TLSQQAAYPQPQS--QQSQQTAY 593
Score = 120 (47.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 51/174 (29%), Positives = 66/174 (37%)
Query: 417 PASGYNQQGQG-YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
P+ G G G Y Q+S G Y S YG Y +Q YN+ N + G
Sbjct: 777 PSGGQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPN-ANYPSAGMAGSMNP 835
Query: 476 YGAQGDSTQAPP-PVQSSAAMGQQGYGT-GQQP-SPNTASYPPQ---GATQPSYGVP-PT 528
GA G P P + G+ + + G +P PN A+ PPQ G P G+ T
Sbjct: 836 MGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKT 895
Query: 529 SQSGYGSQVPP---QSGYAGY-GMPQAQKPLANPPAYGQTQQS-PGSAGGYGQP 577
++ V Q+ GY M Q PP YGQ S G G P
Sbjct: 896 QETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPP-YGQGINSMAGMINPQGPP 948
Score = 109 (43.4 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 59/206 (28%), Positives = 74/206 (35%)
Query: 412 SYSQPPASGYNQQGQGYAQDSY-GGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
SY +P Y + D + P G G PY + G G GNV ++
Sbjct: 1227 SY-EPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGD--PYSRAAG----PGLGNVAMGPRQ 1279
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQG-YGTGQQPSPNTA-SYPPQGATQPSYGVPPT 528
H P YG D + P + G +G GTG P PN S P G PS PP
Sbjct: 1280 -HYP-YGGPYDRVRTEPGI------GPEGNMGTGA-PQPNLMPSNPDSGMYSPSR-YPPQ 1329
Query: 529 SQS-------GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA--GGYGQPGY 579
Q YG+Q Q +G P Q + Y Q QQ+ G YG P
Sbjct: 1330 QQQQQQRRHDSYGNQFSTQGTPSGSPFPSQQTTM-----YQQQQQNYKRPMDGTYGPPAK 1384
Query: 580 SHS---QPPPSSYAQPDSGSQRAPPS 602
H P S Q Q+ PP+
Sbjct: 1385 RHEGEMYSVPYSTGQGQPQQQQLPPA 1410
Score = 101 (40.6 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 61/209 (29%), Positives = 76/209 (36%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G YS P ++G QGQ Q P S A P QQ YN YGN +
Sbjct: 1388 GEMYSVPYSTG---QGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQ---YGNAYPATA 1441
Query: 470 EGHT---PSYGAQG--------DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPP--Q 516
T P+ G Q D APP + M Q G Q S A Q
Sbjct: 1442 AAATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQ 1501
Query: 517 GATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ 576
G +Y T++ GS PQ G A +G+ + + L + P + G Q
Sbjct: 1502 GRNDMTYNY--TNRQSTGSA--PQ-GPAYHGVNRTDEMLHTDQR--ANHEGPWPSHGTRQ 1554
Query: 577 PGYSHSQP-PPSSYAQPDSGSQRAPPSNY 604
P Y S P PP + R PPSNY
Sbjct: 1555 PPYGPSAPLPPMT---------RPPPSNY 1574
Score = 101 (40.6 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 58/198 (29%), Positives = 67/198 (33%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
YS S+ P QQ Q DSYG + Q G +P+ QQ T +
Sbjct: 1321 YSPSRYPPQ--QQQQQQRRHDSYGNQFSTQ-GTPSGSPFPSQQ------------TTMYQ 1365
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQ 530
+Y D T PP + M Y TGQ P PP QP P SQ
Sbjct: 1366 QQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQG-QPQQQQLPP---AQPQ----PASQ 1417
Query: 531 SGYGSQVPPQSGYAGYG--MPQ-AQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPS 587
P Q Y YG P A PA G Q P +G+ S PP
Sbjct: 1418 QQAAQPSPQQDVYNQYGNAYPATAAAATERRPAGGPQNQFPFQ---FGRDRVS---APPG 1471
Query: 588 SYAQPDSGSQRAPPSNYG 605
S AQ Q PP G
Sbjct: 1472 SNAQ-----QNMPPQMMG 1484
Score = 94 (38.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 28/69 (40%), Positives = 32/69 (46%)
Query: 306 YSQQG---YQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP- 361
Y+QQ Q +PP S P QP Y QP + P PQ SQPPY PSQP
Sbjct: 472 YNQQSPHPQQQQPPYSQQPPSQNPHAQPSYQQ-QPQSQP---PQLQASQPPYSQQPSQPP 527
Query: 362 ---TPGGYP 367
+P YP
Sbjct: 528 HQQSPTPYP 536
Score = 88 (36.0 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 41/146 (28%), Positives = 50/146 (34%)
Query: 468 SQEGHTPSYGAQGDSTQAP-PPVQSSAAMGQQGYGTGQQPSP----NTASYPPQGATQPS 522
S G + S G Q + Q+P P S G +G SP + S P A P
Sbjct: 663 STSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPG 722
Query: 523 YGVPPTSQSGYGSQVP-PQSGYAGYGMPQAQKPLANP--PAYGQTQQSPGSAGGYGQPGY 579
+PP SG + P + + NP P Y Q PGSA QP
Sbjct: 723 NQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQ-RNPQMPQYSSPQ--PGSALSPRQPSG 779
Query: 580 SHSQPPPSSYAQPDSGSQRAPPSNYG 605
SY Q GS S YG
Sbjct: 780 GQMHTGMGSYQQNSMGSYGPQGSQYG 805
Score = 80 (33.2 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 26/71 (36%), Positives = 32/71 (45%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQ--PGAYPGQTP---QYNMSQP 352
+NP Y QQ Q++PP + P QQP Q P YP Q P Q+ SQP
Sbjct: 493 QNPHAQPSYQQQP-QSQPPQLQASQ-PPYSQQPSQPPHQQSPTPYPSQQPTTQQHPQSQP 550
Query: 353 PYGGYPSQPTP 363
PY P +P
Sbjct: 551 PYS-QPQAQSP 560
Score = 74 (31.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 24/66 (36%), Positives = 26/66 (39%)
Query: 312 QARPPTSWGTPGAPSMQQ-PGYGYVQPGAY--PGQTPQYNMS-------QPPYGGYPSQP 361
Q R ++ G G QQ P YG P Y GQTP YN QPPY P
Sbjct: 436 QGRAQSAMG--GLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQ 493
Query: 362 TPGGYP 367
P P
Sbjct: 494 NPHAQP 499
Score = 64 (27.6 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 32/86 (37%), Positives = 36/86 (41%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGT-P-----GAPSMQQPGYGYVQPGA-YPGQTPQ-YNM 349
R P + Q G + RP GT P G S Q G+GY PG Y QTPQ Y M
Sbjct: 377 RTPQPSSPMDQMG-KMRPQPYGGTNPYSQQQGPSSGPQQGHGY--PGQPYGSQTPQRYPM 433
Query: 350 S-----QPPYGG--YPSQPTPGGYPG 368
+ Q GG Y Q P G G
Sbjct: 434 AMQGRAQSAMGGLSYAQQIPPYGQQG 459
Score = 60 (26.2 bits), Expect = 7.0e-08, Sum P(3) = 7.0e-08
Identities = 27/77 (35%), Positives = 29/77 (37%)
Query: 300 PAMAGG---YSQQ-GYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQ------YNM 349
P GG YSQQ G + P G PG P Q Y P A G+ Y
Sbjct: 393 PQPYGGTNPYSQQQGPSSGPQQGHGYPGQPYGSQTPQRY--PMAMQGRAQSAMGGLSYAQ 450
Query: 350 SQPPYGGYPSQPTPGGY 366
PPYG Q P GY
Sbjct: 451 QIPPYG----QQGPSGY 463
Score = 49 (22.3 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 74 LCNSVSAEAKRPRVEN------GSGGFDSADKGFSSPP-SDLKSIPAPSAIPVSYGGYQS 126
L NS RP + N G GG S+D G +PP S ++P P+ YG Q
Sbjct: 99 LKNSNGNAGPRPALNNNLTEPPGGGGGGSSD-GVGAPPHSAAAALPPPA-----YGFGQP 152
Query: 127 MGTS 130
G S
Sbjct: 153 YGRS 156
Score = 46 (21.3 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 28/122 (22%), Positives = 36/122 (29%)
Query: 5 PQYSSDGTPSKRK---YEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQ 61
P + GTP T PS+A R G+ D P + PAD
Sbjct: 279 PSAAGGGTPQPTATPTLNQLLTSPSSA-RGYQGYPGGDYGGGPQDGGAGKGPADMASQCW 337
Query: 62 AAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSY 121
A A AA + + GS G + + PS P Y
Sbjct: 338 GAAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGAQPLARTPQPSSPMDQMGKMR-PQPY 396
Query: 122 GG 123
GG
Sbjct: 397 GG 398
Score = 45 (20.9 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 40 PAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADK 99
PA A +S + PPP E + +A +++ E+ + +A A+R ++ +G ++
Sbjct: 7 PAAA-SSLGNPPPPPSELK--KAEQQQREEAGGEA--AAAAAAERGEMKAAAG--QESEG 59
Query: 100 GFSSPPSDL 108
PP L
Sbjct: 60 PAVGPPQPL 68
Score = 37 (18.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 62 AAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSY 121
AA + ++ +S S+ + R GG SA G + P+ ++ P S
Sbjct: 246 AAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSA 305
Query: 122 GGYQ 125
GYQ
Sbjct: 306 RGYQ 309
>ZFIN|ZDB-GENE-070912-44 [details] [associations]
symbol:igf2bp2a "insulin-like growth factor 2 mRNA
binding protein 2a" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 ZFIN:ZDB-GENE-070912-44
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CR936497
HOVERGEN:HBG052725 eggNOG:NOG249985 GeneTree:ENSGT00530000063171
HOGENOM:HOG000000675 OrthoDB:EOG4FBHSJ EMBL:CT737147
IPI:IPI00865862 SMR:A9C3V8 Ensembl:ENSDART00000102419
Uniprot:A9C3V8
Length = 606
Score = 164 (62.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 60/198 (30%), Positives = 94/198 (47%)
Query: 100 GFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIE---IPNIRVGVIIGKSGETIKYLQL 156
G SS L +P S I +Q +++ IP VG IIGK G+ IK L
Sbjct: 407 GHSSQLGGLYGVPPASGI-----SHQHTAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLAR 461
Query: 157 QSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTG 216
+GA I++ D+ R V + G PE KA+ I L E E+ + +L
Sbjct: 462 FAGASIKIAPAESPDVTQ--RMVIITGPPEAQFKAQGRIFGKLKE-ENFFTAKEEVKL-- 516
Query: 217 QAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDG 276
H +K+P++ G VIGKGG+T+ +Q T A + ++P P D + E V+I G
Sbjct: 517 ---ETH--IKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP-DENDEVFVKISG 569
Query: 277 TSEQIESAKQLVNEVISE 294
++A++ + E+I +
Sbjct: 570 HFFASQTAQRKIREIIQQ 587
Score = 142 (55.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 68/246 (27%), Positives = 110/246 (44%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
+P VG IIGK G TIK + Q+ +K+ + R A + + + + TPE + A +
Sbjct: 204 VPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENA--GAAEKPITIHSTPEGCSTACHM 261
Query: 195 INDVLAEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTGA 252
I D++ + E+ V ++T + +KI N+ VG +IGK G +K ++ T
Sbjct: 262 IMDIM-QKEA-----VDTKVT-----EDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTET 310
Query: 253 RIQVIPLHLPPGDTSTERTVQIDGTSE-----QIESAKQL----VNEVISENRIRN--PA 301
+I + L + ERT+ + G+ E ++E K+L N+V + N+ N P
Sbjct: 311 KITISSLQ-DLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPG 369
Query: 302 M---AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYN--MSQPPYGG 356
+ A G G PP + G G P + GY P + G + Q PP G
Sbjct: 370 LSLSALGIFSTGLSVLPPAA-GPRGIPPVPPTGYN---P--FLGHSSQLGGLYGVPPASG 423
Query: 357 YPSQPT 362
Q T
Sbjct: 424 ISHQHT 429
Score = 42 (19.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 33 TGFSAPDPAVAPTSYNSVPP 52
TG S PA P VPP
Sbjct: 380 TGLSVLPPAAGPRGIPPVPP 399
Score = 39 (18.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 410 GYSYSQPPASGYNQQ 424
G Y PPASG + Q
Sbjct: 413 GGLYGVPPASGISHQ 427
>UNIPROTKB|O00425 [details] [associations]
symbol:IGF2BP3 "Insulin-like growth factor 2 mRNA-binding
protein 3" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003730 "mRNA
3'-UTR binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0006412 "translation" evidence=TAS] [GO:0009653
"anatomical structure morphogenesis" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0017148 "negative regulation of
translation" evidence=ISS] [GO:0045182 "translation regulator
activity" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0042035
"regulation of cytokine biosynthetic process" evidence=IC]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_116125 GO:GO:0017148 GO:GO:0000166
GO:GO:0006412 Gene3D:3.30.70.330 GO:GO:0045182 GO:GO:0048027
GO:GO:0003730 GO:GO:0042035 GO:GO:0009653 EMBL:AC005082
HOVERGEN:HBG052725 KO:K13197 eggNOG:NOG249985 HOGENOM:HOG000000675
OrthoDB:EOG405S0T CTD:10643 OMA:EAQDTKF EMBL:U76705 EMBL:U97188
EMBL:BX640800 EMBL:BX648488 EMBL:AC021876 EMBL:AC079780
EMBL:BC065269 IPI:IPI00165467 IPI:IPI00658000 RefSeq:NP_006538.2
UniGene:Hs.700696 PDB:2E44 PDBsum:2E44 ProteinModelPortal:O00425
SMR:O00425 IntAct:O00425 STRING:O00425 PhosphoSite:O00425
PaxDb:O00425 PRIDE:O00425 Ensembl:ENST00000258729 GeneID:10643
KEGG:hsa:10643 UCSC:uc003swf.3 UCSC:uc003swg.3
GeneCards:GC07M023316 HGNC:HGNC:28868 HPA:HPA002037 MIM:608259
neXtProt:NX_O00425 PharmGKB:PA128394576 InParanoid:O00425
PhylomeDB:O00425 ChiTaRS:Igf2bp3 EvolutionaryTrace:O00425
GenomeRNAi:10643 NextBio:40451 ArrayExpress:O00425 Bgee:O00425
CleanEx:HS_IGF2BP3 CleanEx:HS_IMP3 Genevestigator:O00425
Uniprot:O00425
Length = 579
Score = 161 (61.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 55/182 (30%), Positives = 92/182 (50%)
Query: 114 PSAIPVSYGGYQSMGTSK-KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADL 172
PSA+ Y ++ T + IP + VG IIGK G+ IK L +GA I++ EA
Sbjct: 390 PSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIA-PAEAP- 447
Query: 173 NSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKV 232
++ R V + G PE KA+ I + E E+ S +L H +++P+
Sbjct: 448 DAKVRMVIITGPPEAQFKAQGRIYGKIKE-ENFVSPKEEVKLEA-----H--IRVPSFAA 499
Query: 233 GLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVI 292
G VIGKGG+T+ +Q + A + V+P P D + + V+I G + A++ + E++
Sbjct: 500 GRVIGKGGKTVNELQNLSSAEV-VVPRDQTP-DENDQVVVKITGHFYACQVAQRKIQEIL 557
Query: 293 SE 294
++
Sbjct: 558 TQ 559
Score = 149 (57.5 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 61/214 (28%), Positives = 98/214 (45%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
++ +P VG IIGK G TI+ + Q+ +KI V R A + +S+ ++ TPE + A
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPEGTSAA 256
Query: 192 EQLINDVL-AEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQA 248
+ I +++ EA+ + T + +KI NN VG +IGK G +K ++
Sbjct: 257 CKSILEIMHKEAQD-------IKFT-----EEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE---NRIRNPAMAG- 304
T +I + PL + ERT+ + G E A++ + + I E N I + +
Sbjct: 305 DTDTKITISPLQ-ELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAH 363
Query: 305 ---GYSQQGYQARPPTSWGTP---GAPSMQQPGY 332
G + PPTS P G PS P Y
Sbjct: 364 LIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPY 397
Score = 44 (20.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 102 SSPPSDLKSIPAPSAIPVS 120
++ PSDL+SI + IPVS
Sbjct: 12 NAAPSDLESIFKDAKIPVS 30
>FB|FBgn0036448 [details] [associations]
symbol:mop "myopic" species:7227 "Drosophila melanogaster"
[GO:0004725 "protein tyrosine phosphatase activity"
evidence=ISS;NAS] [GO:0006470 "protein dephosphorylation"
evidence=IEA;NAS] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045742 "positive regulation of epidermal growth factor
receptor signaling pathway" evidence=IGI] [GO:0031982 "vesicle"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0033565
"ESCRT-0 complex" evidence=IDA] [GO:0002775 "antimicrobial peptide
production" evidence=IMP] [GO:0045752 "positive regulation of Toll
signaling pathway" evidence=IMP] [GO:0040008 "regulation of growth"
evidence=IMP] InterPro:IPR000242 InterPro:IPR025304 Pfam:PF00102
Pfam:PF13949 PRINTS:PR00700 PROSITE:PS50055 SMART:SM00194
GO:GO:0051225 GO:GO:0040008 GO:GO:0004725 GO:GO:0045742
Gene3D:1.25.40.280 InterPro:IPR004328 Pfam:PF03097 SMART:SM01041
PROSITE:PS51180 GO:GO:0031982 eggNOG:COG5599 GO:GO:0033565
GO:GO:0045752 HSSP:P18052 GO:GO:0002775 EMBL:AY052076
ProteinModelPortal:Q960G3 SMR:Q960G3 STRING:Q960G3 PaxDb:Q960G3
PRIDE:Q960G3 FlyBase:FBgn0036448 InParanoid:Q960G3
OrthoDB:EOG49CNPW ArrayExpress:Q960G3 Bgee:Q960G3 Uniprot:Q960G3
Length = 1838
Score = 143 (55.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 62/198 (31%), Positives = 74/198 (37%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGN-VNNTS 468
G S QP GY QG Q + GGY Q+ Q Y QQ +GY +
Sbjct: 959 GQSAQQP--LGY-APSQGPQQQA-GGYPQSQTPQQQVGAYQQQP----LSGYAQQLTPQQ 1010
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPT 528
Q G++ S Q QAP Q+ + GQ T QQ P Q Y
Sbjct: 1011 QTGYSQS---QAPQLQAPSYAQNQQSTGQAQQQTPQQQQTGYPQTPQQHLA--GYAQSQQ 1065
Query: 529 SQSGYGSQVPPQSGYAGYGMPQA-QKPLA---NPPAYGQTQQSPGSAGGYGQPGYSHSQP 584
+GY Q GY Q Q+PLA P Y Q QQ A QP SQ
Sbjct: 1066 QATGYPQSQTSQQQTTGYSQSQTPQQPLAYQQQPSGYPQQQQQQSLAPQ--QPSLYPSQA 1123
Query: 585 PPSSYAQPDSGSQRAPPS 602
+S QP G Q PP+
Sbjct: 1124 VQAS-PQPIPGQQATPPN 1140
Score = 139 (54.0 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 52/167 (31%), Positives = 64/167 (38%)
Query: 448 PYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPS 507
PY GY+ A Y VN +Q+ P+ G ST +A GY Q P
Sbjct: 925 PYQTAAGYSGQA-YQQVNAQAQQVTYPT-APSGSST-------GQSAQQPLGYAPSQGPQ 975
Query: 508 PNTASYPPQGATQPSYGVPPTSQ-SGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQ 566
YP Q G SGY Q+ PQ GY Q+Q P P+Y Q QQ
Sbjct: 976 QQAGGYPQSQTPQQQVGAYQQQPLSGYAQQLTPQQ-QTGYS--QSQAPQLQAPSYAQNQQ 1032
Query: 567 SPGSAG---------GYGQ-P-----GYSHSQPPPSSYAQPDSGSQR 598
S G A GY Q P GY+ SQ + Y Q + Q+
Sbjct: 1033 STGQAQQQTPQQQQTGYPQTPQQHLAGYAQSQQQATGYPQSQTSQQQ 1079
Score = 127 (49.8 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 61/210 (29%), Positives = 72/210 (34%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEG 471
+Y Q P SGY QQ Q Y APQ QA Y Q Q ++ Q G
Sbjct: 993 AYQQQPLSGYAQQLTPQQQTGYSQSQAPQL---QAPSYAQNQ-QSTGQAQQQTPQQQQTG 1048
Query: 472 H--TPSYGAQG---DSTQAPPPVQSSAAMGQQ-GYGTGQQPS-PNTASYPPQG--ATQPS 522
+ TP G QA QS + Q GY Q P P P G Q
Sbjct: 1049 YPQTPQQHLAGYAQSQQQATGYPQSQTSQQQTTGYSQSQTPQQPLAYQQQPSGYPQQQQQ 1108
Query: 523 YGVPPTSQSGYGSQVPPQSGYAGYGM----PQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
+ P S Y SQ S G P A +PL P Y +P A G
Sbjct: 1109 QSLAPQQPSLYPSQAVQASPQPIPGQQATPPNAGQPLPYPQQYTDPNATPAPAPGVS--- 1165
Query: 579 YSHSQPPPSSYAQPDSGSQRAPPSNYGAAT 608
S P P P S + P S + +AT
Sbjct: 1166 -SVPSPVPVPTPAPTSSQAQVPTSPHPSAT 1194
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 58/202 (28%), Positives = 77/202 (38%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ-QGYNSAAGYGNVNNTS 468
GY+ SQ A+GY Q Q + GY Q+ Q Y QQ GY ++
Sbjct: 1059 GYAQSQQQATGYPQSQTSQQQTT--GYSQSQTPQ-QPLAYQQQPSGYPQQQQQQSLA-PQ 1114
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-PSPNTASYPPQGATQ-PS-YGV 525
Q PS Q S Q P Q++ Q QQ PN P G + PS V
Sbjct: 1115 QPSLYPSQAVQA-SPQPIPGQQATPPNAGQPLPYPQQYTDPNATPAPAPGVSSVPSPVPV 1173
Query: 526 PPTSQSGYGSQVP----PQSGYAGYGMPQAQKPLANPPAYGQTQQSPGS---AGGYGQPG 578
P + + +QVP P + Y+ Y +N P Y Q+ G + GY Q
Sbjct: 1174 PTPAPTSSQAQVPTSPHPSATYSSY---------SNHPGYSFNPQT-GKYEYSSGYQQDT 1223
Query: 579 YSHSQPPPS-SYAQPDSGSQRA 599
S S SY SG Q++
Sbjct: 1224 SSLKGSQASQSYQFSQSGKQQS 1245
Score = 88 (36.0 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 48/142 (33%), Positives = 60/142 (42%)
Query: 242 TIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPA 301
T+ A G IQ PL++ ++ V + SE + S Q V N + NP
Sbjct: 876 TVPASSASQGLNIQQ-PLYV----ATSGNPVSVSNPSE-LPSTLQAPFVV---NPMSNPY 926
Query: 302 M-AGGYSQQGYQ---ARP-----PTS-WGTPGAPSMQQP-GYG-----YVQPGAYP-GQT 344
A GYS Q YQ A+ PT+ G+ S QQP GY Q G YP QT
Sbjct: 927 QTAAGYSGQAYQQVNAQAQQVTYPTAPSGSSTGQSAQQPLGYAPSQGPQQQAGGYPQSQT 986
Query: 345 PQYNMS---QPPYGGYPSQPTP 363
PQ + Q P GY Q TP
Sbjct: 987 PQQQVGAYQQQPLSGYAQQLTP 1008
Score = 56 (24.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 19/65 (29%), Positives = 23/65 (35%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQY--NMSQPPYGGYPSQPT 362
G SQ QA ++G P S P Y PG P + N+ QP Y P
Sbjct: 845 GQSQDNNQAGMAYNYGYP---SGSVPPLAYAPPGTVPASSASQGLNIQQPLYVATSGNPV 901
Query: 363 PGGYP 367
P
Sbjct: 902 SVSNP 906
Score = 50 (22.7 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 10 DGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPP 52
D +K D + P RP + +P A SY + PP
Sbjct: 742 DYLKAKAAMADASNPAYVPTVRPVPVGSENPTQAACSYATAPP 784
>UNIPROTKB|F1MVN0 [details] [associations]
symbol:ATN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0050827 "toxin receptor binding" evidence=IEA] [GO:0030011
"maintenance of cell polarity" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0009404 "toxin metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
GO:GO:0005737 GO:GO:0003714 GO:GO:0016477 GO:GO:0051402
GO:GO:0000122 GO:GO:0016363 GO:GO:0009404 CTD:1822 KO:K05626
OMA:ATFPHVT GO:GO:0030011 InterPro:IPR017993 InterPro:IPR002951
Pfam:PF03154 PRINTS:PR01222 GeneTree:ENSGT00580000081398
EMBL:DAAA02014453 IPI:IPI00691822 RefSeq:NP_001192677.1
UniGene:Bt.52676 Ensembl:ENSBTAT00000025063 GeneID:513125
KEGG:bta:513125 NextBio:20870713 ArrayExpress:F1MVN0 Uniprot:F1MVN0
Length = 1184
Score = 140 (54.3 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 62/199 (31%), Positives = 74/199 (37%)
Query: 415 QPPASGYNQQGQGYAQDSYGGY-HAPQSGYGQAA-PYDQQQGYNSAAGYGNVNNTSQEGH 472
QPP + G G G Y H +SG A PY S Y H
Sbjct: 493 QPPPPHHG--GSGPPPP--GAYPHPLESGGSHHAHPYAMSPSLGSLRPY-----PPGPAH 543
Query: 473 TPSYGAQGDSTQA-P--PPVQSSA--AMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPP 527
P +Q +QA P PP SS+ + QG G PSP S P GA P VPP
Sbjct: 544 LPPPHSQVSYSQAGPNGPPTSSSSNSSSSSQGSYPGSHPSP---SQGPSGAPYPFPPVPP 600
Query: 528 -TSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPP 586
T+ S S V + G A P PP YG+ SPG+ PGY PP
Sbjct: 601 VTTSSATLSTVIATVASSPAGYKTASPP--GPPPYGKRAPSPGAYKTATPPGYKPGSPPS 658
Query: 587 SSYAQPDSGSQRAPPSNYG 605
P +PP+ G
Sbjct: 659 FRTGTPPGYRGASPPAGPG 677
Score = 98 (39.6 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 41/157 (26%), Positives = 57/157 (36%)
Query: 448 PYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPS 507
PY ++AA N + ++ P+ A + PP S + Q T QPS
Sbjct: 375 PYSSSTSSSAAAASSNSSASASASQYPASQALPSYPHSFPPPTSLSVSNQPPKYT--QPS 432
Query: 508 -PNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQ 566
P+ A + P YG + S + PP +G P A + Q QQ
Sbjct: 433 LPSQAVWSQGPPPPPPYGRLLANSSAHPGPFPPSAGGQSTAHPSAPTHHHHHQQQQQQQQ 492
Query: 567 SPGSAGGYGQPGYSHSQPPPSSYAQP--DSGSQRAPP 601
P +G G PPP +Y P GS A P
Sbjct: 493 QPPPPH-HGGSG----PPPPGAYPHPLESGGSHHAHP 524
Score = 75 (31.5 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 35/121 (28%), Positives = 47/121 (38%)
Query: 24 PPSAAARRPT-GFSAPDPAVAPTSYNSV--PPPADEFQDFQAAKRRAEQIAARLCNSVSA 80
PP + R+P GF P P+V PT Y++ PP + FQ A Q+
Sbjct: 171 PPDSTPRQPEPGFE-PHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGSGG-GV 228
Query: 81 EAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRV 140
+ P GSG S PS K P P+ P+S G + + PN V
Sbjct: 229 LSGPPLGPKGSGAASSV-----GAPSGGKQHPPPTT-PISISS-SGAGGAPPTKPPNTPV 281
Query: 141 G 141
G
Sbjct: 282 G 282
Score = 69 (29.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 34/119 (28%), Positives = 51/119 (42%)
Query: 265 DTSTERTVQIDGTSE--QIESAKQLVN-EVISENRIRNPA-MAGGYSQ---QGYQARP-- 315
D+ R++ DG+S+ I+ + + + S + N + + G SQ + Y P
Sbjct: 106 DSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLF 165
Query: 316 PTSWGTPGA-PSMQQPGYG---YVQPGAY--PGQTPQYNMSQPPYGGYPSQPTPGGYPG 368
P S P + P +PG+ V P Y P + P M Q P G P P P YPG
Sbjct: 166 PPSPPPPDSTPRQPEPGFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPP--PHPQLYPG 222
Score = 54 (24.1 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 33/115 (28%), Positives = 42/115 (36%)
Query: 24 PPSAAARRPTGF----SAPDPAVAP-TSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSV 78
PP+ P G SAP PA P + N PPPA + A + A+ +
Sbjct: 272 PPTKPPNTPVGGGSLPSAPPPASFPHVTPNLPPPPA--LRPLNNASASPPGLGAQ---PL 326
Query: 79 SAEAKRPRVENGS-GGFDSA-DKGFSSPPSDLKSIPAPSAIPVSYGGYQ-SMGTS 130
P S GG +KG + PS PA S+ P Y S TS
Sbjct: 327 PGHLPSPHAMGQSMGGLPPGPEKGPTLAPSPHPLPPASSSAPAPTMRYPYSSSTS 381
Score = 53 (23.7 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 19/51 (37%), Positives = 22/51 (43%)
Query: 8 SSDGTPSKRK-YEDQTTPPSAAARRPTGFSAPDPAVAPT---SYNSVPPPA 54
SS G PS K + TTP S ++ G P P S S PPPA
Sbjct: 243 SSVGAPSGGKQHPPPTTPISISSSGAGGAPPTKPPNTPVGGGSLPSAPPPA 293
Score = 51 (23.0 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 24/68 (35%), Positives = 29/68 (42%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGG-YPS 359
A + G G Q PPT TP S+ G G GA P + P + P GG PS
Sbjct: 242 ASSVGAPSGGKQHPPPT---TP--ISISSSGAG----GAPPTKPP----NTPVGGGSLPS 288
Query: 360 QPTPGGYP 367
P P +P
Sbjct: 289 APPPASFP 296
Score = 50 (22.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/51 (39%), Positives = 23/51 (45%)
Query: 310 GYQA--RPPTS---WGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG 355
GY A PPTS PGAP P + P YPG + +S PP G
Sbjct: 193 GYHAPMEPPTSRMFQAPPGAP----PPH----PQLYPGGSGGGVLSGPPLG 235
Score = 50 (22.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/55 (32%), Positives = 24/55 (43%)
Query: 5 PQYSSDGTPSKR-KYEDQTTPPSAAARRPTGFSA-----PDPAVAPTSYNSVPPP 53
P SS P+ R Y T+ +AAA + SA P P+ +S PPP
Sbjct: 362 PASSSAPAPTMRYPYSSSTSSSAAAASSNSSASASASQYPASQALPSYPHSFPPP 416
Score = 47 (21.6 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 22 TTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
+ PP A+ T P PA+ P + S PP
Sbjct: 288 SAPPPASFPHVTPNLPPPPALRPLNNASASPP 319
Score = 45 (20.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 16/60 (26%), Positives = 25/60 (41%)
Query: 25 PSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSVSAEAKR 84
P + PT AP P P + +S P P + ++ + AA +S SA A +
Sbjct: 344 PPGPEKGPT--LAPSPHPLPPASSSAPAPTMRYP--YSSSTSSSAAAASSNSSASASASQ 399
Score = 43 (20.2 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 300 PAMAGGYSQQ-GYQARPPTSWGTPGAPSMQQPGYGYVQ--PGAYPGQTPQYNMSQPPYGG 356
P M YS A +S + A + Q P + P ++P T +QPP
Sbjct: 370 PTMRYPYSSSTSSSAAAASSNSSASASASQYPASQALPSYPHSFPPPTSLSVSNQPPKYT 429
Query: 357 YPSQPT 362
PS P+
Sbjct: 430 QPSLPS 435
Score = 41 (19.5 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 5 PQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSA-PDP 40
P+Y+ PS+ + PP R SA P P
Sbjct: 426 PKYTQPSLPSQAVWSQGPPPPPPYGRLLANSSAHPGP 462
>UNIPROTKB|J9P1K6 [details] [associations]
symbol:J9P1K6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS50102
SMART:SM00360 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00530000063105 EMBL:AAEX03008745
Ensembl:ENSCAFT00000001155 Uniprot:J9P1K6
Length = 580
Score = 159 (61.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 65/205 (31%), Positives = 84/205 (40%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTS--QEGHTP 474
++ Y+ Q AQ Y Y P GY QA QQ Y + YG + S Q T
Sbjct: 3 STDYSIYSQTAAQQGYSAYTTQPTQGYAQATQAYGQQSYGT---YGQPTDVSYTQAQTTA 59
Query: 475 SYG--AQGDSTQAPP-----PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPP 527
+YG A S PP P + + Q Y TG + TA +TQ SY
Sbjct: 60 TYGQTAYATSYGQPPAGYTTPTAPAYSQPVQWYDTGAYDT-TTAMVT---STQASYA--- 112
Query: 528 TSQSGYGSQVP-PQSGYAGYGMPQAQKPLANPPAY-GQTQQSPGSAG----GYGQPGYSH 581
+QS YG+Q P G A+ N PA Q Q S G GYGQ YS+
Sbjct: 113 -AQSAYGTQPAYPACGLQPAATAPARPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSY 171
Query: 582 SQPPPSSYAQPDSGSQRAPPSNYGA 606
+Q P S QP + PP++Y +
Sbjct: 172 TQVPGSYRMQPVTAPPSYPPTSYSS 196
Score = 158 (60.7 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 71/216 (32%), Positives = 84/216 (38%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQS-GYGQA---APYDQQQ---GYNSA-AG 460
GYS Y+ P GY Q Q Y Q SYG Y P Y QA A Y Q Y AG
Sbjct: 17 GYSAYTTQPTQGYAQATQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPAG 76
Query: 461 YGNVNNTSQEGHTPSY--GAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGA 518
Y + Y GA +T Q+S A Q YGT QP+ YP G
Sbjct: 77 YTTPTAPAYSQPVQWYDTGAYDTTTAMVTSTQASYA-AQSAYGT--QPA-----YPACGL 128
Query: 519 TQPSYGVPPTSQSGY--GSQVPPQSGYAGYGMPQ---AQKPLANPPAYGQTQQSPGSAG- 572
QP+ P Q G PQS GY P Q + G + P +A
Sbjct: 129 -QPAATAPARPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYTQVPGSYRMQPVTAPP 187
Query: 573 GYGQPGYSHSQPPP---SSYAQPDSGSQRAPPSNYG 605
Y YS +QP SSY Q ++ Q PS+YG
Sbjct: 188 SYPPTSYSSTQPTSYDQSSYLQQNTYGQ---PSSYG 220
Score = 124 (48.7 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 58/201 (28%), Positives = 75/201 (37%)
Query: 413 YSQPPASGYNQQGQGYAQDSYGGYHA----PQSGYGQAAPYDQQQGYNSAAGY---GNVN 465
Y+ P A Y+Q Q Y +Y A Q+ Y + Y Q Y A G
Sbjct: 77 YTTPTAPAYSQPVQWYDTGAYDTTTAMVTSTQASYAAQSAYGTQPAY-PACGLQPAATAP 135
Query: 466 NTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQP-SYG 524
Q+G+ P+ +Q S+ Q S GQ Y Q P SY Q T P SY
Sbjct: 136 ARPQDGNKPAETSQPQSSTGGYN-QPSLGYGQSNYSYTQVPG----SYRMQPVTAPPSY- 189
Query: 525 VPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQP 584
PPTS Y S P + Y Q P +YGQ +GG+ PG + S
Sbjct: 190 -PPTS---YSSTQPTSYDQSSY---LQQNTYGQPSSYGQ------ESGGFSGPGENWSMS 236
Query: 585 PPSSYAQPDSGSQRAPPSNYG 605
P + + G R S G
Sbjct: 237 GPDNRGRGRGGFNRGGMSRGG 257
Score = 40 (19.1 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 12/38 (31%), Positives = 12/38 (31%)
Query: 329 QPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGGY 366
QP GY Q GQ QP Y T Y
Sbjct: 24 QPTQGYAQATQAYGQQSYGTYGQPTDVSYTQAQTTATY 61
>UNIPROTKB|P23246 [details] [associations]
symbol:SFPQ "Splicing factor, proline- and glutamine-rich"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0006397
"mRNA processing" evidence=TAS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0042382 "paraspeckles"
evidence=IDA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 GO:GO:0003677 EMBL:CH471059 GO:GO:0006281
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0000122
GO:GO:0006310 GO:GO:0016363 GO:GO:0000380 GO:GO:0042382
InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586 KO:K13219
HOGENOM:HOG000231095 HOVERGEN:HBG009801 EMBL:X70944 EMBL:AL590434
EMBL:X16850 IPI:IPI00010740 IPI:IPI00216613 PIR:A46302 PIR:S29770
RefSeq:NP_005057.1 UniGene:Hs.355934 UniGene:Hs.611911
ProteinModelPortal:P23246 SMR:P23246 IntAct:P23246
MINT:MINT-1141893 STRING:P23246 PhosphoSite:P23246 DMDM:1709851
SWISS-2DPAGE:P23246 PaxDb:P23246 PeptideAtlas:P23246 PRIDE:P23246
Ensembl:ENST00000357214 GeneID:6421 KEGG:hsa:6421 UCSC:uc001bys.3
CTD:6421 GeneCards:GC01M035641 HGNC:HGNC:10774 HPA:CAB009886
MIM:605199 neXtProt:NX_P23246 PharmGKB:PA35690 InParanoid:P23246
OMA:APGGHPK OrthoDB:EOG4RNB8S PhylomeDB:P23246 ChiTaRS:SFPQ
GenomeRNAi:6421 NextBio:24935 ArrayExpress:P23246 Bgee:P23246
CleanEx:HS_SFPQ Genevestigator:P23246 GermOnline:ENSG00000116560
Uniprot:P23246
Length = 707
Score = 160 (61.4 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 57/193 (29%), Positives = 69/193 (35%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP + QQ Q Q P P+ QQQ G P
Sbjct: 61 PPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPG 120
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTA--SYPPQGA---TQPSYGVPPTSQ 530
G+ ++ + PP + G G G P+P A S PP GA T PS GVP T
Sbjct: 121 VGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPP-GAPPPTPPSSGVPTTPP 179
Query: 531 SGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYG--QPGYSHSQPPPSS 588
G PP + G G Q P P G+ P GG G PG H +PP
Sbjct: 180 QA-GGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPG-GHPKPPHRG 237
Query: 589 YAQPDSGSQRAPP 601
+P G Q PP
Sbjct: 238 GGEPRGGRQHHPP 250
Score = 47 (21.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 20/64 (31%), Positives = 22/64 (34%)
Query: 304 GGYSQQG-YQAR-PPTSWGTPGAPSMQQPGYGYVQPGA-YPGQTPQYNMSQPP-YGGYPS 359
GG + G + R PP G PG G P P P QPP P
Sbjct: 21 GGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQ 80
Query: 360 QPTP 363
QP P
Sbjct: 81 QPPP 84
>UNIPROTKB|P10163 [details] [associations]
symbol:PRB4 "Basic salivary proline-rich protein 4"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=NAS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] GO:GO:0005576
InterPro:IPR026086 PANTHER:PTHR23203 EMBL:K03207 EMBL:X07882
EMBL:X07715 EMBL:AC010176 EMBL:BC130386 EMBL:S80916 EMBL:X07704
IPI:IPI00019482 PIR:S03176 RefSeq:NP_001248328.1 RefSeq:NP_002714.2
UniGene:Hs.528651 DisProt:DP00119 STRING:P10163 DMDM:158517854
PaxDb:P10163 PRIDE:P10163 GeneID:5545 KEGG:hsa:5545 CTD:5545
GeneCards:GC12M011460 H-InvDB:HIX0079490 HGNC:HGNC:9340 MIM:180990
neXtProt:NX_P10163 PharmGKB:PA33702 GenomeRNAi:5545 NextBio:21484
CleanEx:HS_PRB4 Genevestigator:P10163 GermOnline:ENSG00000121335
Uniprot:P10163
Length = 310
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/150 (34%), Positives = 59/150 (39%)
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSP---NTASYPPQGATQPSYGVP 526
EG P G Q + PPP QG Q P P PPQG Q S G P
Sbjct: 37 EGRRPQGGNQPQ--RPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQ-SQGPP 93
Query: 527 PTSQSGYGSQVPPQSGYAGYGMP-QAQKPLANPPAYGQTQQSPGSAGGY--GQP--GYSH 581
P G + PPQ G G P KP + PP G Q P G G P G +
Sbjct: 94 P--HPGKPERPPPQGGNQSQGPPPHPGKPESRPPQGGHQSQGPPPTPGKPEGPPPQGGNQ 151
Query: 582 SQ--PPPSSYAQ---PDSGSQ-RAPPSNYG 605
SQ PPP + P G+Q + PP + G
Sbjct: 152 SQGTPPPPGKPEGRPPQGGNQSQGPPPHPG 181
Score = 135 (52.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 49/140 (35%), Positives = 58/140 (41%)
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASY---PPQGATQPSYGVP 526
+G P G Q S PPP QG Q P P+ PPQG Q S G P
Sbjct: 58 QGPPPQGGNQ--SQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQ-SQGPP 114
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQ-KPLANPPAYG-QTQQSPGSAGG-YGQP--GYSH 581
P G PPQ G+ G P KP PP G Q+Q +P G G+P G +
Sbjct: 115 P--HPGKPESRPPQGGHQSQGPPPTPGKPEGPPPQGGNQSQGTPPPPGKPEGRPPQGGNQ 172
Query: 582 SQPPPSSYAQPDSGSQRAPP 601
SQ PP +P+ R PP
Sbjct: 173 SQGPPPHPGKPE----RPPP 188
Score = 121 (47.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 56/202 (27%), Positives = 68/202 (33%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSG---YGQAAPYDQQQGYNSAAG---YGN 463
G S+PP G+ QG G PQ G G P + +G G G
Sbjct: 118 GKPESRPPQGGHQSQGPPPTPGKPEG-PPPQGGNQSQGTPPPPGKPEGRPPQGGNQSQGP 176
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG-YGTGQQPSPNTASYPP--QGATQ 520
+ + P G PPP + Q G G P P PP +G
Sbjct: 177 PPHPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKS 236
Query: 521 PSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS 580
S PP G P Q G G P KP PP G QQ P A G+P
Sbjct: 237 RSARSPPGKPQG----PPQQEGNKPQGPPPPGKPQGPPPPGGNPQQ-P-QAPPAGKP--- 287
Query: 581 HSQPPPSSYAQPDSGSQ-RAPP 601
PPP +P +Q + PP
Sbjct: 288 QGPPPPPQGGRPPRPAQGQQPP 309
Score = 120 (47.3 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 60/205 (29%), Positives = 67/205 (32%)
Query: 416 PPASGYNQ-QGQGYAQDSYGGYHAPQSG-YGQAAPYDQQQGYNSAAGYGNVNN--TSQEG 471
PP G NQ QG G PQ G Q P + GN + G
Sbjct: 60 PPPQGGNQSQGPPPPPGKPEG-RPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGPPPHPG 118
Query: 472 HTPSYGAQGD-STQAPPPVQSSAAM-----GQQGYGTGQQPSPNTASYPPQGATQPSYGV 525
S QG +Q PPP G Q GT P PPQG Q S G
Sbjct: 119 KPESRPPQGGHQSQGPPPTPGKPEGPPPQGGNQSQGTPPPPG-KPEGRPPQGGNQ-SQGP 176
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQAQ-KPLANPPAYGQTQQSPGSAGGYGQPGYSHSQP 584
PP G + PPQ G + P KP PP G Q P PG P
Sbjct: 177 PP--HPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPP-----HPGKPEGPP 229
Query: 585 PP----SSYAQPDSGSQRAPPSNYG 605
P S A+ G + PP G
Sbjct: 230 PQEGNKSRSARSPPGKPQGPPQQEG 254
Score = 77 (32.2 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 29/73 (39%), Positives = 32/73 (43%)
Query: 304 GGYSQQGYQA-RPPTSWGTPGAPSMQ--QPGYGYVQPGAYP-GQTPQY-NMSQ--PPYGG 356
G Q G Q RPP G P P Q G P P G+ PQ N SQ PP+ G
Sbjct: 38 GRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPG 97
Query: 357 YPSQPTPGGYPGN 369
P +P P G GN
Sbjct: 98 KPERPPPQG--GN 108
Score = 40 (19.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 30 RRPTGFSAPDPAVAPTSYNSVPPP 53
RRP G + P P PPP
Sbjct: 39 RRPQGGNQPQRPPPPPGKPQGPPP 62
>ZFIN|ZDB-GENE-070117-2501 [details] [associations]
symbol:sec24d "SEC24 family, member D (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0030127 "COPII vesicle
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0070278 "extracellular matrix
constituent secretion" evidence=IMP] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0060536 "cartilage
morphogenesis" evidence=IMP] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
ZFIN:ZDB-GENE-070117-2501 GO:GO:0006886 GO:GO:0008270
InterPro:IPR007123 Pfam:PF00626 GO:GO:0006888 GO:GO:0048703
GO:GO:0060536 GO:GO:0030127 GO:GO:0070278 InterPro:IPR012990
Pfam:PF08033 SUPFAM:SSF81811 GeneTree:ENSGT00590000082962
EMBL:CABZ01087345 EMBL:CABZ01087346 EMBL:CABZ01112895
EMBL:CABZ01112896 EMBL:CABZ01117105 EMBL:CABZ01117106
IPI:IPI00968580 Ensembl:ENSDART00000058763 Bgee:F1R3A4
Uniprot:F1R3A4
Length = 1029
Score = 153 (58.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 62/189 (32%), Positives = 75/189 (39%)
Query: 440 QSGYGQAAPYDQQQ-GYNS-AAGYGNVNNTSQEGH--TPSYGAQGDSTQA-PPPVQSSAA 494
Q GY PY Q Q G AAG+GN S G +P+ G T PP S +
Sbjct: 3 QQGYVATPPYSQAQAGMGGYAAGFGNPPPQSHYGAYGSPTQGYSAPPTGVLKPPASSPSG 62
Query: 495 MG----QQGYGTG-QQPSPNTASYPPQGATQPS---YGVPP-TSQSGYGSQVPPQS---- 541
M YGT QQ + S+PP ++ PS YG PP T+ +PP
Sbjct: 63 MPPPPVSSQYGTNIQQNGAHPHSFPPPVSSSPSMSPYGQPPPTAFHSMAQALPPTQQLTN 122
Query: 542 -----GYAGYGMPQAQKPLANPPAYGQTQQSPGSAGG--YGQPGYSHSQPPPSSYAQPDS 594
AGYG Q P + PA+ QT P G PG QP P P +
Sbjct: 123 QMSAMNIAGYGQRPVQSPSNSAPAHFQTSPPPPVMGHPPLSPPG---QQPSPLGSPPPMA 179
Query: 595 --GSQRAPP 601
GS APP
Sbjct: 180 TMGSMPAPP 188
Score = 135 (52.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 55/192 (28%), Positives = 66/192 (34%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
+ +S PP + Y Q +H+ Q + AGYG S
Sbjct: 82 HPHSFPPPVSSSPSMSPYGQPPPTAFHSMAQALPPTQQLTNQMSAMNIAGYGQRPVQSPS 141
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQ 530
P++ T PPPV + G QQPSP PP AT S PP
Sbjct: 142 NSAPAHF----QTSPPPPVMGHPPLSPPG----QQPSP--LGSPPPMATMGSMPAPPMGM 191
Query: 531 SGYGSQVPPQSGYAGYGMPQAQ-KPLANPPAYGQTQQSPGSAGGY-GQ-PGYSHSQP--- 584
SG V Q + G PQ P+A P YG P AG G PG P
Sbjct: 192 SGPPGPVVHQPPHGPQGYPQQPGSPIAGP--YGAQMAGPQMAGPQTGAFPGGFAGGPAQM 249
Query: 585 --PPSSYAQPDS 594
PP PDS
Sbjct: 250 AGPPQKKLDPDS 261
Score = 77 (32.2 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 23/64 (35%), Positives = 28/64 (43%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQ--TPQYNMSQPPYGGY-PSQPTP 363
SQQGY A PP S G G+G P ++ G +P S PP G P +P
Sbjct: 2 SQQGYVATPPYSQAQAGMGGYAA-GFGNPPPQSHYGAYGSPTQGYSAPPTGVLKPPASSP 60
Query: 364 GGYP 367
G P
Sbjct: 61 SGMP 64
Score = 56 (24.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 85 PRVENGSGGFDSADKGFSSPPSDLKSIPA--PSAIP 118
P ++ G + S +G+S+PP+ + PA PS +P
Sbjct: 29 PPPQSHYGAYGSPTQGYSAPPTGVLKPPASSPSGMP 64
>UNIPROTKB|J9P8W9 [details] [associations]
symbol:IGF2BP3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 KO:K13197 GeneTree:ENSGT00530000063171 CTD:10643
OMA:EAQDTKF EMBL:AAEX03009368 EMBL:AAEX03009369 EMBL:AAEX03009370
RefSeq:XP_539474.2 Ensembl:ENSCAFT00000046043 GeneID:482357
KEGG:cfa:482357 Uniprot:J9P8W9
Length = 579
Score = 161 (61.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 55/182 (30%), Positives = 92/182 (50%)
Query: 114 PSAIPVSYGGYQSMGTSK-KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADL 172
PSA+ Y ++ T + IP + VG IIGK G+ IK L +GA I++ EA
Sbjct: 390 PSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIA-PAEAP- 447
Query: 173 NSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKV 232
++ R V + G PE KA+ I + E E+ S +L H +++P+
Sbjct: 448 DAKVRMVIITGPPEAQFKAQGRIYGKIKE-ENFVSPKEEVKLEA-----H--IRVPSFAA 499
Query: 233 GLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVI 292
G VIGKGG+T+ +Q + A + V+P P D + + V+I G + A++ + E++
Sbjct: 500 GRVIGKGGKTVNELQNLSSAEV-VVPRDQTP-DENDQVVVKITGHFYACQVAQRKIQEIL 557
Query: 293 SE 294
++
Sbjct: 558 TQ 559
Score = 149 (57.5 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 61/214 (28%), Positives = 98/214 (45%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
++ +P VG IIGK G TI+ + Q+ +KI V R A + +S+ ++ TPE + A
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPEGTSAA 256
Query: 192 EQLINDVL-AEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQA 248
+ I +++ EA+ + T + +KI NN VG +IGK G +K ++
Sbjct: 257 CKSILEIMHKEAQD-------IKFT-----EEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 304
Query: 249 RTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISE---NRIRNPAMAG- 304
T +I + PL + ERT+ + G E A++ + + I E N I + +
Sbjct: 305 DTDTKITISPLQ-ELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAH 363
Query: 305 ---GYSQQGYQARPPTSWGTP---GAPSMQQPGY 332
G + PPTS P G PS P Y
Sbjct: 364 LIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPY 397
Score = 43 (20.2 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 105 PSDLKSIPAPSAIPVS 120
PSDL+SI + IPVS
Sbjct: 15 PSDLESIFKDAKIPVS 30
>UNIPROTKB|Q2TAV5 [details] [associations]
symbol:ilf3 "CBTF122 protein" species:8355 "Xenopus laevis"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003725
"double-stranded RNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 GO:GO:0005634
GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0006357 GO:GO:0044212
GO:GO:0003725 InterPro:IPR006561 Pfam:PF07528 SMART:SM00572
UniGene:Xl.3647 Xenbase:XB-GENE-494371 HOVERGEN:HBG069915 KO:K13090
EMBL:BC110711 RefSeq:NP_001083930.1 ProteinModelPortal:Q2TAV5
SMR:Q2TAV5 GeneID:399197 KEGG:xla:399197 CTD:399197 Uniprot:Q2TAV5
Length = 902
Score = 161 (61.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 66/207 (31%), Positives = 76/207 (36%)
Query: 425 GQGYAQDS-YGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ-EGHTPSYGAQGDS 482
G GY YGG + Y +A Q Y++ GN G SY QGDS
Sbjct: 652 GGGYMNSGGYGGGYGGNYNYQTSATAGYSQFYSNGGASGNAGGGGAGTGGYSSY-YQGDS 710
Query: 483 TQAP-PP---VQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY----GVPPTSQSGYG 534
AP PP V QQ QQP P AS PP+ + Y G Q
Sbjct: 711 YSAPTPPKPFVNKKPPPPQQQQQ--QQPPPQHASNPPKPSYNQGYQGHQGGQQQQQQQQQ 768
Query: 535 SQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ---------PGYSHSQPP 585
Q Q+ Y+ YG PQ QK Y Q Q GS G Y PGY +
Sbjct: 769 QQTYNQNQYSNYGPPQKQKG-----GYNQGAQGAGSGGSYNYSNSYTGGTAPGYGSGEGA 823
Query: 586 P----SSYAQPDSGSQRAPPSNYGAAT 608
SSY P SG S YG A+
Sbjct: 824 GGRGGSSYTAPSSGYNTGAHSGYGGAS 850
Score = 124 (48.7 bits), Expect = 0.00049, P = 0.00049
Identities = 63/247 (25%), Positives = 80/247 (32%)
Query: 355 GGYP-SQPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSY 413
GGY S GGY GN++ G SY
Sbjct: 653 GGYMNSGGYGGGYGGNYNYQTSATAGYSQFYSNGGASGNAGGGGAGTGGYSSYYQ-GDSY 711
Query: 414 SQP-PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGH 472
S P P + + Q PQ P QGY G Q+
Sbjct: 712 SAPTPPKPFVNKKPPPPQQQQQQQPPPQHASNPPKP-SYNQGYQGHQGGQQQQQQQQQQQ 770
Query: 473 TPSYGAQGDSTQAPPPVQSSAA-MGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQS 531
T Y S PP Q G QG G+G + + SY G T P YG +
Sbjct: 771 T--YNQNQYSNYGPPQKQKGGYNQGAQGAGSGGSYNYSN-SYT--GGTAPGYGSGEGAGG 825
Query: 532 -GYGSQVPPQSGYAGYGMPQAQKPLANPPAY-GQTQQSPGSAGGYGQPGYSHSQPPPSSY 589
G S P SGY G ++ Y G TQ + G PG ++S PP ++Y
Sbjct: 826 RGGSSYTAPSSGY-NTGAHSGYGGASSTSTYQGYTQSNYNQ----GPPGQNYSGPP-NNY 879
Query: 590 AQPDSGS 596
QP G+
Sbjct: 880 QQPQGGA 886
>MGI|MGI:1890358 [details] [associations]
symbol:Igf2bp2 "insulin-like growth factor 2 mRNA binding
protein 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730
"mRNA 3'-UTR binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=ISO] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding"
evidence=ISO] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
MGI:MGI:1890358 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048027 GO:GO:0003730
HOVERGEN:HBG052725 eggNOG:NOG249985 GeneTree:ENSGT00530000063171
HOGENOM:HOG000000675 CTD:10644 OrthoDB:EOG4FBHSJ ChiTaRS:IGF2BP2
GO:GO:0044430 EMBL:AY531659 EMBL:AK170531 EMBL:CT009567
IPI:IPI00338748 IPI:IPI00761863 RefSeq:NP_898850.2
UniGene:Mm.489442 ProteinModelPortal:Q5SF07 SMR:Q5SF07
STRING:Q5SF07 PhosphoSite:Q5SF07 REPRODUCTION-2DPAGE:Q5SF07
PaxDb:Q5SF07 PRIDE:Q5SF07 Ensembl:ENSMUST00000100052 GeneID:319765
KEGG:mmu:319765 UCSC:uc007yrz.1 UCSC:uc007ysb.1 InParanoid:A6X8Z4
OMA:KQQEQKH NextBio:395368 Bgee:Q5SF07 Genevestigator:Q5SF07
GermOnline:ENSMUSG00000033581 Uniprot:Q5SF07
Length = 592
Score = 158 (60.7 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 80/308 (25%), Positives = 137/308 (44%)
Query: 81 EAKRPRVENGSGG-FDSADKGFSSPPSDLKSIPAPSAIPVSYG-GYQSMGTSKKIE---- 134
EAK +E SG F+ S P + S P+P G G S +++I+
Sbjct: 132 EAKLA-IEKLSGHQFEDYSFKISYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLR 190
Query: 135 --IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+P VG IIGK G TIK + Q+ +++ + R + + + V + TPE ++A
Sbjct: 191 ILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSEAC 248
Query: 193 QLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQART 250
++I +++ + E+ + + ++ +KI N VG +IGK G +K ++ T
Sbjct: 249 RMILEIM-QKEADETKL----------AEEVPLKILAHNGFVGRLIGKEGRNLKKIEHET 297
Query: 251 GARIQVIPLHLPPGDTSTERTVQIDGTSE-----QIESAKQL----VNEVISENRIRN-- 299
G +I + L + ERT+ + GT E +IE K+L N++++ N+ N
Sbjct: 298 GTKITISSLQ-DLSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLI 356
Query: 300 PAM---AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQTPQYNMSQ-PPY 354
P + A G G PP + G G P P + + G + P ++ P +
Sbjct: 357 PGLNLSALGIFSTGLSVLPPPA-GPRGVPP-SPPYHPFATHSGYFSSLYPHHHFGPFPHH 414
Query: 355 GGYPSQPT 362
YP Q T
Sbjct: 415 HSYPEQET 422
Score = 150 (57.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 52/175 (29%), Positives = 86/175 (49%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
IP VG IIGK G IK L +GA I++ D++ R V + G PE KA+
Sbjct: 427 IPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSE--RMVIITGPPEAQFKAQGR 484
Query: 195 INDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
I L E E+ + +L H +++P++ G VIGKGG+T+ +Q T A +
Sbjct: 485 IFGKLKE-ENFFNPKEEVKLEA-----H--IRVPSSTAGRVIGKGGKTVNELQNLTSAEV 536
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
++P P D + E V+I G ++A++ + E++ + + + G + Q
Sbjct: 537 -IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQRYPQGVAPQ 589
>UNIPROTKB|E1C0T1 [details] [associations]
symbol:TFG "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] InterPro:IPR000270 Pfam:PF00564 SMART:SM00666
GO:GO:0043123 GO:GO:0004871 CTD:10342 KO:K09292 OMA:YTTQTSQ
GeneTree:ENSGT00510000047809 EMBL:AADN02032793 IPI:IPI00599103
RefSeq:XP_416608.1 UniGene:Gga.1550 PRIDE:E1C0T1
Ensembl:ENSGALT00000024692 GeneID:418391 KEGG:gga:418391
NextBio:20821576 Uniprot:E1C0T1
Length = 395
Score = 155 (59.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 56/169 (33%), Positives = 72/169 (42%)
Query: 417 PASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT-PS 475
P +G +GQ Y Q GY A Q QA P QQ G AGY SQ P+
Sbjct: 235 PQTGQQVEGQMYQQYQQPGYPAQQP---QAQP-QQQYGVQYPAGYSPQQAASQPTQQFPA 290
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTA-SYPPQG----ATQPS-YGVPPTS 529
Y +Q P P + GQ QQP A S+PPQ A+QP+ Y PP +
Sbjct: 291 Y------SQQPAPAAAFPGQGQAQQLPAQQPQQYPAGSFPPQPYTTQASQPAPYSGPPGA 344
Query: 530 QSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPG 578
Q+ G+ P+ G+ P + P Y +T+ P GY QPG
Sbjct: 345 QAAPGT-FQPRPGFTPPPGSTMTPPPSGPNPYARTRP-PFGPQGYAQPG 391
>UNIPROTKB|P51513 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007626 "locomotory behavior"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0008380 GO:GO:0007268
GO:GO:0003729 GO:GO:0007626 GO:GO:0003723 EMBL:CH471078
GO:GO:0000398 EMBL:U04840 EMBL:AK289639 EMBL:AK291022 EMBL:BC075038
EMBL:BC075039 EMBL:Z70771 IPI:IPI00019244 IPI:IPI00221187
IPI:IPI00221188 IPI:IPI00816603 PIR:I38489 RefSeq:NP_002506.2
RefSeq:NP_006480.2 RefSeq:NP_006482.1 UniGene:Hs.31588 PDB:1DT4
PDB:2ANN PDB:2ANR PDBsum:1DT4 PDBsum:2ANN PDBsum:2ANR
ProteinModelPortal:P51513 SMR:P51513 IntAct:P51513
MINT:MINT-1381951 STRING:P51513 PhosphoSite:P51513 DMDM:1709303
PRIDE:P51513 Ensembl:ENST00000344429 Ensembl:ENST00000539517
GeneID:4857 KEGG:hsa:4857 UCSC:uc001wpy.3 UCSC:uc001wqa.3
UCSC:uc001wqb.3 CTD:4857 GeneCards:GC14M026915 H-InvDB:HIX0037755
HGNC:HGNC:7886 HPA:HPA004155 MIM:602157 neXtProt:NX_P51513
PharmGKB:PA31688 eggNOG:NOG258094 HOGENOM:HOG000007833
HOVERGEN:HBG082048 InParanoid:P51513 KO:K14944 OMA:FRQNNTA
ChiTaRS:NOVA1 EvolutionaryTrace:P51513 GenomeRNAi:4857
NextBio:18710 ArrayExpress:P51513 Bgee:P51513 CleanEx:HS_NOVA1
Genevestigator:P51513 GermOnline:ENSG00000139910 Uniprot:P51513
Length = 510
Score = 136 (52.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 95 DSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYL 154
D + S P+ KS P+ P++ S KI +PN G+IIGK G T+K +
Sbjct: 148 DRIKQTLPSSPTTTKSSPSD---PMT----TSRANQVKIIVPNSTAGLIIGKGGATVKAV 200
Query: 155 QLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGS--GIVAR 212
QSGA +Q+++ + +N R V + G PEQ KA +LI + E GS I
Sbjct: 201 MEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYA 259
Query: 213 RLTGQAGSDH 222
+TG + +
Sbjct: 260 NVTGPVANSN 269
Score = 128 (50.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 45/154 (29%), Positives = 67/154 (43%)
Query: 158 SGAKIQVTRDTEADLNSPTRSVELMGTPE--QIAKAEQLINDVLAEAES-GGSGIVARRL 214
+ A + T +EA + T GT +A A N A S I+
Sbjct: 360 AAANLLATYASEASASGSTAG-GTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEK 418
Query: 215 TGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSTERTVQ 273
+ D + +P N VG ++GKGG+T+ Q TGARIQ+ PG + R V
Sbjct: 419 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPG--TRNRKVT 476
Query: 274 IDGTSEQIESAKQLVNEVIS-ENRIR--NPAMAG 304
I GT ++A+ L+ + I+ E +R NP G
Sbjct: 477 ITGTPAATQAAQYLITQRITYEQGVRAANPQKVG 510
Score = 120 (47.3 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
+PN+ GL+IGKGG T+K + ++GA +Q+ P G ER V + G EQ A +
Sbjct: 181 VPNSTAGLIIGKGGATVKAVMEQSGAWVQLS--QKPDGINLQERVVTVSGEPEQNRKAVE 238
Query: 287 LVNEVISEN 295
L+ + I E+
Sbjct: 239 LIIQKIQED 247
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 33/92 (35%), Positives = 46/92 (50%)
Query: 207 SGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLP---- 262
+G R TG+ G + IP+ G +IGKGG+TI +Q TGA I++ L
Sbjct: 36 AGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFY 95
Query: 263 PGDTSTERTVQIDGTSEQIESAKQLVNEVISE 294
PG +TER I GT E + + + E I E
Sbjct: 96 PG--TTERVCLIQGTVEALNAVHGFIAEKIRE 125
Score = 84 (34.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEA-DLNSPT--RSVELMGTPEQI 188
K+ IP+ G IIGK G+TI LQ ++GA I++++ +++ D T R + GT E +
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVEAL 112
Query: 189 AKAEQLINDVLAE 201
I + + E
Sbjct: 113 NAVHGFIAEKIRE 125
Score = 40 (19.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 276 GTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQ 312
GT + + +K +V + EN + GG + YQ
Sbjct: 415 GTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQ 451
>MGI|MGI:1935147 [details] [associations]
symbol:Arid1a "AT rich interactive domain 1A (SWI-like)"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006325
"chromatin organization" evidence=IPI] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=ISO;IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISO] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=ISO] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0042921 "glucocorticoid
receptor signaling pathway" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=IDA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 MGI:MGI:1935147 GO:GO:0045893
GO:GO:0007399 GO:GO:0030521 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
eggNOG:NOG12793 CTD:8289 HOVERGEN:HBG058196 KO:K11653
OrthoDB:EOG437RD2 ChiTaRS:ARID1A GO:GO:0030520 Gene3D:1.10.150.60
InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774 EMBL:AF268912
EMBL:CR751606 EMBL:BX537327 EMBL:CR925752 EMBL:BC082554
IPI:IPI00127131 IPI:IPI00955140 IPI:IPI00955160 IPI:IPI00974963
RefSeq:NP_001074288.1 UniGene:Mm.22478 ProteinModelPortal:A2BH40
SMR:A2BH40 DIP:DIP-58952N IntAct:A2BH40 MINT:MINT-4301934
STRING:A2BH40 PhosphoSite:A2BH40 PaxDb:A2BH40 PRIDE:A2BH40
Ensembl:ENSMUST00000008024 Ensembl:ENSMUST00000105897 GeneID:93760
KEGG:mmu:93760 UCSC:uc008vdh.1 UCSC:uc008vdj.1
GeneTree:ENSGT00550000074575 HOGENOM:HOG000232161 InParanoid:A2BH40
NextBio:351643 Bgee:A2BH40 Genevestigator:A2BH40 GO:GO:0006325
Uniprot:A2BH40
Length = 2283
Score = 166 (63.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 67/209 (32%), Positives = 78/209 (37%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGG-----YHAPQSGYGQAA----PYDQQ---QGYNSA 458
YS Q P SG QQG GY YG Y G Q+A Y QQ G
Sbjct: 403 YSQQQGPPSG-PQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGSLSYAQQIPPYGQQGP 461
Query: 459 AGYGNVNNTSQEGHTPSYGAQGDSTQAPPP-VQSSAAMGQQGYGTGQQPSPNTASYPPQG 517
+ YG Q+G TP Y Q Q PP Q + + QQ P T P
Sbjct: 462 SAYG------QQGQTPYYNQQSPHPQQQPPYAQQPPSQTPHAQPSYQQ-QPQTQQ-PQLQ 513
Query: 518 ATQPSYGVPPTSQSGYGSQVP-PQSGYAGYGMPQAQKPLANPPA---YGQTQ-QSPGSAG 572
++QP Y P+ S P P PQ+Q P + P A Y Q Q Q P S+
Sbjct: 514 SSQPPYSQQPSQPPHQQSPTPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSS 573
Query: 573 GYGQPGYSHSQPPPSSYAQPDSGSQRAPP 601
Q Y QP P Q QR PP
Sbjct: 574 LSQQAAYP--QPQPQQSQQTAYSQQRFPP 600
Score = 127 (49.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 53/174 (30%), Positives = 66/174 (37%)
Query: 417 PASGYNQQGQG-YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
P+ G G G Y Q+S G Y S YG Y +Q YN+ N N G
Sbjct: 777 PSGGQMHSGVGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPN-ANYPNAGMAGSMNP 835
Query: 476 YGAQGDSTQAPP-PVQSSAAMGQQGYGT-GQQP-SPNTASYPPQ---GATQPSYGVP-PT 528
GA G P P + G+ + + G +P PN A+ PPQ G P G+ T
Sbjct: 836 MGAGGQMHGQPGIPPYGTLPPGRMAHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKT 895
Query: 529 SQSGYGSQVPP---QSGYAGY-GMPQAQKPLANPPAYGQTQQS-PGSAGGYGQP 577
+S V Q+ GY M Q PP YGQ S G G P
Sbjct: 896 QESAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPP-YGQGINSMAGMINPQGPP 948
Score = 127 (49.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 83/300 (27%), Positives = 102/300 (34%)
Query: 319 WGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYG-GYPSQPTPGGYPGNWDXXXXXX 377
+G G G G QP A P T ++ P GY Q PGG G
Sbjct: 272 FGAMGGGGPSAAGGGTPQPTATP--TLNQLLTSPSSARGY--QGYPGGDYGGGPQDGGAG 327
Query: 378 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPASGYNQQGQGYAQDSYG--- 434
++ P +SG Q S
Sbjct: 328 KGPADMASQCWGAAAAAAAAAAAVSGGAQQRSHHAPMSPGSSGGGGQPLARTPQSSSPMD 387
Query: 435 --GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSS 492
G PQ YG PY QQQG S G+ G P YG+Q + P +Q
Sbjct: 388 QMGKMRPQP-YGGTNPYSQQQGPPSGPQQGH----GYPGQ-P-YGSQTPQ-RYPMTMQGR 439
Query: 493 A--AMGQQGYGTGQQP--SPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGM 548
A AMG Y P ++Y QG T P Y QS + Q PP YA
Sbjct: 440 AQSAMGSLSYAQQIPPYGQQGPSAYGQQGQT-PYYN----QQSPHPQQQPP---YAQ--Q 489
Query: 549 PQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSH--SQPP----PSSYAQPDSGSQRAPPS 602
P +Q P A P +Y Q Q+ QP YS SQPP P+ Y S +Q+ P S
Sbjct: 490 PPSQTPHAQP-SYQQQPQTQQPQLQSSQPPYSQQPSQPPHQQSPTPYPSQQSTTQQHPQS 548
Score = 105 (42.0 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 54/203 (26%), Positives = 70/203 (34%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G YS P ++G QGQ Q P S A P QQ YN + + T+
Sbjct: 1387 GEMYSVPYSAG---QGQPQQQQLPAAQSQPASQPQAAQPSPQQDVYNQYSNAYPASATAA 1443
Query: 470 EGHTPSYGAQG--------DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPP--QGAT 519
P+ G Q D APP + M Q G Q S A QG
Sbjct: 1444 TDRRPAGGPQNQFPFQFGRDRVSAPPGSSAQQNMPPQMMGGPIQASAEVAQQGTMWQGRN 1503
Query: 520 QPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
+Y +G +Q P A +G+ + + L + P + G QP Y
Sbjct: 1504 DMTYNYANRQNTGSATQGP-----AYHGVNRTDEMLHTDQR--ANHEGPWPSHGTRQPPY 1556
Query: 580 SHSQPPPSSYAQPDSGSQRAPPS 602
S P P P S Q PPS
Sbjct: 1557 GPSAPVPPMTRPPPSNYQ-PPPS 1578
Score = 99 (39.9 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 54/196 (27%), Positives = 69/196 (35%)
Query: 412 SYSQPPASGYNQQGQGYAQDSY-GGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
SY +P Y + D + P G G PY + G G G+V ++
Sbjct: 1226 SY-EPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGD--PYSRAAG----PGLGSVAMGPRQ 1278
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQG-YGTGQQPSPNTA-SYPPQGATQPSYGVPPT 528
H P YG D + P + G +G GTG P PN S P G PS PP
Sbjct: 1279 -HYP-YGGPYDRVRTEPGI------GPEGNMGTGA-PQPNLMPSTPDSGMYSPSR-YPPQ 1328
Query: 529 SQSGYGSQVPPQSG-YAGYGMPQAQK-PLANPPAYGQTQQSPGSA--GGYGQPGYSHSQP 584
Q Q ++ G P + P Y Q QQ+ G YG P H
Sbjct: 1329 QQQQQQQQHDSYGNQFSTQGTPSSSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEG- 1387
Query: 585 PPSSYAQPDSGSQRAP 600
Y+ P S Q P
Sbjct: 1388 --EMYSVPYSAGQGQP 1401
Score = 97 (39.2 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 56/209 (26%), Positives = 78/209 (37%)
Query: 415 QPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAA--PYDQQQGY----NSAAGYGNVNNTS 468
QPP + +AQ SY Q Q++ PY QQ S Y + +T+
Sbjct: 483 QPPYAQQPPSQTPHAQPSYQQQPQTQQPQLQSSQPPYSQQPSQPPHQQSPTPYPSQQSTT 542
Query: 469 QEG--HTPSYG---AQGDSTQAPPPVQSSAAMGQQG-YGTGQ-QPSPNTASY-----PPQ 516
Q+ P Y AQ Q P +S+++ QQ Y Q Q S TA PPQ
Sbjct: 543 QQHPQSQPPYSQPQAQSPYQQQQPQQPASSSLSQQAAYPQPQPQQSQQTAYSQQRFPPPQ 602
Query: 517 GATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSP-GSAG--- 572
+Q S+G + S S + G + +P + P G P G+ G
Sbjct: 603 ELSQDSFG---SQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALS 659
Query: 573 -GYGQPGYSHSQPPPSSYAQPDSGSQRAP 600
G G S SQ S+ AQ +P
Sbjct: 660 PGVSTSGISSSQGEQSNPAQSPFSPHTSP 688
Score = 95 (38.5 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 51/193 (26%), Positives = 68/193 (35%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
YS S+ P QQ Q + DSYG + Q G ++P+ QQ T +
Sbjct: 1320 YSPSRYPPQQQQQQQQQH--DSYGNQFSTQ-GTPSSSPFPSQQ------------TTMYQ 1364
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQ-QPSPNTA-SYPPQGATQPSYGVPPT 528
+Y D T PP + M Y GQ QP + Q A+QP P
Sbjct: 1365 QQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSAGQGQPQQQQLPAAQSQPASQPQAAQPSP 1424
Query: 529 SQSGYG--SQVPPQSGYAGYGMPQAQKPLANPP-AYGQTQQS--PGSAGGYGQPGYSHSQ 583
Q Y S P S A A P P +G+ + S PGS+ P
Sbjct: 1425 QQDVYNQYSNAYPASATAATDRRPAGGPQNQFPFQFGRDRVSAPPGSSAQQNMPPQMMGG 1484
Query: 584 PPPSSYAQPDSGS 596
P +S G+
Sbjct: 1485 PIQASAEVAQQGT 1497
Score = 84 (34.6 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 24/64 (37%), Positives = 28/64 (43%)
Query: 312 QARPPTSWGTPGAPSMQQPGYGYVQPGAY--PGQTPQYNMS------QPPYGGYPSQPTP 363
Q R ++ G+ + Q P YG P AY GQTP YN QPPY P TP
Sbjct: 437 QGRAQSAMGSLSY-AQQIPPYGQQGPSAYGQQGQTPYYNQQSPHPQQQPPYAQQPPSQTP 495
Query: 364 GGYP 367
P
Sbjct: 496 HAQP 499
Score = 70 (29.7 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 24/71 (33%), Positives = 28/71 (39%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQ--PGAYPGQ---TPQYNMSQP 352
+ P Y QQ +P P P QQP Q P YP Q T Q+ SQP
Sbjct: 493 QTPHAQPSYQQQPQTQQPQLQSSQP--PYSQQPSQPPHQQSPTPYPSQQSTTQQHPQSQP 550
Query: 353 PYGGYPSQPTP 363
PY P +P
Sbjct: 551 PYS-QPQAQSP 560
Score = 66 (28.3 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 26/73 (35%), Positives = 27/73 (36%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQP---GAYPGQTPQYNMSQPPY 354
RNP M S Q A P P M G G Q G+Y Q QY P
Sbjct: 756 RNPQMPQYTSPQPGSALSPRQ---PSGGQMHS-GVGSYQQNSMGSYGPQGSQYG----PQ 807
Query: 355 GGYPSQPTPGGYP 367
GGYP QP P
Sbjct: 808 GGYPRQPNYNALP 820
Score = 58 (25.5 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 4 EPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAP-TSYNS--VPPPADEFQD 59
+P YS S + + P S++ + + P P + T+Y+ PPP + QD
Sbjct: 549 QPPYSQPQAQSPYQQQQPQQPASSSLSQQAAYPQPQPQQSQQTAYSQQRFPPPQELSQD 607
Score = 51 (23.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 90 GSGGFDSADKGFSSPP-SDLKSIPAPSAIPVSYGGYQSMGTS 130
G GG S+ G +PP S ++P P+ YG Q+ G S
Sbjct: 122 GGGGGSSSSDGVGAPPHSAAAALPPPA-----YGFGQAYGRS 158
Score = 50 (22.7 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 33/125 (26%), Positives = 40/125 (32%)
Query: 5 PQYSSDGTPSKRK---YEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQ 61
P + GTP T PS+A R G+ D P + PAD
Sbjct: 280 PSAAGGGTPQPTATPTLNQLLTSPSSA-RGYQGYPGGDYGGGPQDGGAGKGPADMASQCW 338
Query: 62 AAKRRAEQIAARLCNSVSAEAKRPRVENGS---GGFDSADKGFSSPPSDLKSIPAPSAIP 118
A A AA + + + GS GG A SS P D P P
Sbjct: 339 GAAAAAAAAAAAVSGGAQQRSHHAPMSPGSSGGGGQPLARTPQSSSPMDQMGKMRPQ--P 396
Query: 119 VSYGG 123
YGG
Sbjct: 397 --YGG 399
Score = 48 (22.0 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 307 SQQGYQARPPTSWGTPGAPSMQQ----PGYGYV-QPGAYPGQTPQYNMSQPPY 354
+QQ Q++PP S +P QQ P + Q AYP PQ + Q Y
Sbjct: 542 TQQHPQSQPPYSQPQAQSPYQQQQPQQPASSSLSQQAAYPQPQPQQSQ-QTAY 593
Score = 44 (20.5 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 40 PAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADK 99
PA A +S + PPP E + +A +++ E+ + +A A+R ++ +G ++
Sbjct: 7 PAAA-SSLGNPPPPPSELK--KAEQQQREEAGGE---AAAAAAERGEMKAAAG--QESEG 58
Query: 100 GFSSPPSDL 108
PP L
Sbjct: 59 PAVGPPQPL 67
Score = 37 (18.1 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 62 AAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSY 121
AA + ++ +S S+ + R GG SA G + P+ ++ P S
Sbjct: 247 AAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSA 306
Query: 122 GGYQ 125
GYQ
Sbjct: 307 RGYQ 310
>TAIR|locus:2137430 [details] [associations]
symbol:AT4G08380 "AT4G08380" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL109819 EMBL:AL161511
IPI:IPI00525988 PIR:T14192 RefSeq:NP_192578.1 UniGene:At.65340
ProteinModelPortal:Q9STN0 EnsemblPlants:AT4G08380.1 GeneID:826395
KEGG:ath:AT4G08380 TAIR:At4g08380 OMA:DKATQYW
ProtClustDB:CLSN2916137 Genevestigator:Q9STN0 Uniprot:Q9STN0
Length = 437
Score = 117 (46.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 55/208 (26%), Positives = 73/208 (35%)
Query: 411 YSYSQPPASGYNQQGQGYAQD-SYGGYHAPQSGYGQAAPYDQQQGYNSAAG-YGNVNNTS 468
Y YS PP Y+ Y+ S Y +P Y PY Y+ Y +
Sbjct: 197 YVYSSPPPYAYSPPPYAYSPPPSPYVYKSPPYVYSSPPPY----AYSPPPSPYVYKSPPY 252
Query: 469 QEGHTPSYGAQGDST----QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQP--- 521
P Y + ++PP V SS Y PSP PP + P
Sbjct: 253 VYSSPPPYAYSPPPSPYVYKSPPYVYSSPPP----YAYSPPPSPYVYKSPPYVYSSPPPY 308
Query: 522 SYGVPPT----SQSGYGSQVPPQSGYAGYGMPQAQK-P---LANPPAYGQTQQSPGSAGG 573
+Y PP+ Y PP Y+ P K P ++PP Y + P S
Sbjct: 309 AYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSP--PPSPYV 366
Query: 574 YGQPGYSHSQPPPSSYAQPDSGSQRAPP 601
Y P Y +S PPP +Y+ P PP
Sbjct: 367 YKSPPYVYSSPPPYTYSPPPYAYSPPPP 394
Score = 111 (44.1 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 61/210 (29%), Positives = 75/210 (35%)
Query: 411 YSYSQPPASGYNQQGQGYAQDS---YGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNT 467
Y+YS PP S Y + Y S Y Y P S Y +P Y+S Y
Sbjct: 236 YAYSPPP-SPYVYKSPPYVYSSPPPYA-YSPPPSPYVYKSP---PYVYSSPPPYAYSPPP 290
Query: 468 SQEGH-TPSYGAQGDSTQA--PPP---VQSSAAMGQQG---YGTGQQPSPNTASYPPQG- 517
S + +P Y A PPP V S Y PSP PP
Sbjct: 291 SPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVY 350
Query: 518 ATQPSYGV-PPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ 576
++ P Y PP S Y S PP Y Y P +PP Y + P Y
Sbjct: 351 SSPPPYAYSPPPSPYVYKS--PP---YV-YSSPPPYT--YSPPPYAYSPPPP-CPDVYKP 401
Query: 577 PGYSHSQPPPSSYAQPDSGSQRAPPSNYGA 606
P Y +S PPP Y P S +P +Y +
Sbjct: 402 PPYVYSSPPPYVYNPPPSSPPPSPSYSYSS 431
Score = 91 (37.1 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 50/187 (26%), Positives = 63/187 (33%)
Query: 411 YSYSQPPASGYNQQGQGYAQDS---YGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNT 467
Y+YS PP S Y + Y S Y Y P S Y +P Y+S Y
Sbjct: 260 YAYSPPP-SPYVYKSPPYVYSSPPPYA-YSPPPSPYVYKSP---PYVYSSPPPYAYSPPP 314
Query: 468 SQEGH-TPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
S + +P Y A P S Y P P S PP S
Sbjct: 315 SPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPY-VYSSPPPYAYSPPPSPYVYKSPPYV 373
Query: 527 PTSQSGYGSQVPPQSGYAGYGMPQAQKP----LANPPAYGQTQQSPGSAGGYGQPGYSHS 582
+S Y PP + P KP ++PP Y +P + P YS+S
Sbjct: 374 YSSPPPYTYSPPPYAYSPPPPCPDVYKPPPYVYSSPPPY---VYNPPPSSPPPSPSYSYS 430
Query: 583 QPPPSSY 589
PPP Y
Sbjct: 431 SPPPPIY 437
Score = 82 (33.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 311 YQARPPTSWGTPGAPSM-QQPGYGYVQPGAYP-GQTPQYNMSQPPYGGYPSQPTPGGY 366
Y + PP ++ P +P + + P Y Y P Y P Y S PPY Y P+P Y
Sbjct: 112 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYVYSSPPPYAYSPPPYA-YSPPPSPYVY 168
Score = 77 (32.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 311 YQARPPTSWGTPGAPSMQQPGYGYVQPGA-YPGQTPQYNMSQPPYGGYPSQPTPGGY 366
Y + PP + +P + P Y Y P + Y ++P Y S PP Y P+P Y
Sbjct: 136 YSSPPPYVYSSPPPYAYSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVY 192
Score = 73 (30.8 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 311 YQARPPTSWGTPGAPSM-QQPGYGYVQPGAYPGQTPQYNMSQPP----YGGYP---SQPT 362
Y + PP ++ P +P + + P Y Y P Y P Y S PP Y P S P
Sbjct: 175 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPYAYSPPPSPYVYKSPPYVYSSPP 234
Query: 363 PGGY 366
P Y
Sbjct: 235 PYAY 238
Score = 70 (29.7 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 21/65 (32%), Positives = 27/65 (41%)
Query: 306 YSQQGYQARPPTS---WGTPGAPSMQQPGYGYVQPGA-YPGQTPQYNMSQPPYGGYPSQP 361
YS Y PP S + +P P Y Y P + Y ++P Y S PP Y P
Sbjct: 207 YSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPP 266
Query: 362 TPGGY 366
+P Y
Sbjct: 267 SPYVY 271
Score = 67 (28.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 311 YQARPPTSWGTPGAPSM-QQPGYGYVQPGAY-----PG----QTPQYNMSQPPYGGYPSQ 360
Y + PP ++ P +P + + P Y Y P Y P ++P Y S PP Y
Sbjct: 64 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPP 123
Query: 361 PTPGGY 366
P+P Y
Sbjct: 124 PSPYVY 129
Score = 61 (26.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 22/67 (32%), Positives = 28/67 (41%)
Query: 301 AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGA-YPGQTPQYNMSQPPYGGYPS 359
A+A S Q Y PP+ P P Y Y P + Y ++P Y S PP Y
Sbjct: 19 AVAAHTSAQ-YPYSPPSP---PPYVYSSPPPYTYSPPPSPYVYKSPPYVYSSPPPYAYSP 74
Query: 360 QPTPGGY 366
P+P Y
Sbjct: 75 PPSPYVY 81
Score = 58 (25.5 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 5 PQYSSDGTPSKRKYEDQTTPPSA-AARRPTGFSAPDP-AVAPTSYNSVPPPA 54
P Y+ PS Y+ +PP ++ P +S+P P A +P Y PPP+
Sbjct: 116 PPYAYSPPPSPYVYK---SPPYVYSSPPPYVYSSPPPYAYSPPPYAYSPPPS 164
Score = 38 (18.4 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 101 FSSPPSDLKSIPAPSAI-PVSY 121
+SSPP + S P P A P Y
Sbjct: 136 YSSPPPYVYSSPPPYAYSPPPY 157
>UNIPROTKB|F1NWN2 [details] [associations]
symbol:IGF2BP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GeneTree:ENSGT00530000063171 EMBL:AADN02024285
EMBL:AADN02024286 IPI:IPI00599184 Ensembl:ENSGALT00000010541
Uniprot:F1NWN2
Length = 551
Score = 157 (60.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 61/208 (29%), Positives = 97/208 (46%)
Query: 100 GFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIE--IPNIRVGVIIGKSGETIKYLQLQ 157
G S PS + A +A P Y + + + + IP VG IIGK G+ IK L
Sbjct: 350 GLSMLPSSAGARGAAAAAP--YHPFAQLPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARF 407
Query: 158 SGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQ 217
+GA I++ D R V + G PE KA+ I L E E+ + +L
Sbjct: 408 AGASIKIAPAEGPDATE--RMVIITGPPEAQFKAQGRIFGKLKE-ENFFNPKEEVKLEA- 463
Query: 218 AGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGT 277
H +K+P+ G VIGKGG+T+ +Q T A + ++P P D + E V+I G
Sbjct: 464 ----H--IKVPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP-DENEEVIVKIIGH 515
Query: 278 SEQIESAKQLVNEVISENRIRNPAMAGG 305
++A++ + E++ + + + A G
Sbjct: 516 FFASQTAQRKIREIVQQVKQQEQKHAQG 543
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 62/219 (28%), Positives = 106/219 (48%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
+P VG IIGK G TIK L Q+ +K+ + R A + + + + TPE ++A ++
Sbjct: 173 VPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSEACRM 230
Query: 195 INDVLA-EAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTG 251
I D++ EA+ S ++ +KI N+ VG +IGK G +K ++ TG
Sbjct: 231 ILDIMQKEADETKS------------AEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTG 278
Query: 252 ARIQVIPLHLPPGDTSTERTVQIDGTSE-----QIESAKQL----VNEVISENRIRN--P 300
+I + PL + ERT+ + G++E ++E K+L N++++ N+ N P
Sbjct: 279 TKITISPLQ-DLTIYNPERTITVKGSTEACSNAEVEIMKKLREAYENDIVAVNQQANLIP 337
Query: 301 AM---AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQ 336
+ A G G P +S G GA + P + + Q
Sbjct: 338 GLNLSALGIFSTGLSMLP-SSAGARGAAAAA-PYHPFAQ 374
>UNIPROTKB|J9NTN3 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:AAEX03001719
Ensembl:ENSCAFT00000044234 Uniprot:J9NTN3
Length = 1899
Score = 155 (59.6 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 70/200 (35%), Positives = 82/200 (41%)
Query: 410 GYSYSQPPASGYNQQG-QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTS 468
G SY+Q Y QQG GY Q Y Y Q +P+ QQQ Y S
Sbjct: 61 GLSYAQQ-IPPYGQQGPSGYGQQGQTPY------YNQQSPHPQQQ----QPPYSQ-QPPS 108
Query: 469 QEGHT-PSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPS--PNTASYPPQGATQPSYGV 525
Q H PSY Q S PP +Q+S Q Y QQPS P+ S P + QP+
Sbjct: 109 QNPHAQPSYQQQPQSQ--PPQLQAS----QPPYS--QQPSQPPHQQSPTPYPSQQPTTQQ 160
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQ--AQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
P SQ Y SQ QS Y PQ A L+ AY Q Q Y Q +
Sbjct: 161 HPQSQPPY-SQPQAQSPYQQQ-QPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRF---- 214
Query: 584 PPPSSYAQPDSGSQRAP-PS 602
PPP +Q GSQ + PS
Sbjct: 215 PPPQELSQDSFGSQASSAPS 234
Score = 147 (56.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 64/203 (31%), Positives = 78/203 (38%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
YS Q P+SG QQG GY YG PQ Y A Q + + Q+
Sbjct: 18 YSQQQGPSSG-PQQGHGYPGQPYGS-QTPQR-YPMAMQGRAQSAMGGLSYAQQIPPYGQQ 74
Query: 471 GHTPS-YGAQGDST----QAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGV 525
G PS YG QG + Q+P P Q QQ P+ P Q
Sbjct: 75 G--PSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQNPHAQPSYQQQPQSQPPQLQASQ 132
Query: 526 PPTSQSGYGSQVPPQSGYAGYGMPQA---QKPLANPPAYGQTQ-QSPGSAGGYGQPGYSH 581
PP SQ SQ P Q Y Q Q P + PP Y Q Q QSP QP S
Sbjct: 133 PPYSQQP--SQPPHQQSPTPYPSQQPTTQQHPQSQPP-YSQPQAQSPYQQQQPQQPA-SS 188
Query: 582 SQPPPSSYAQPDSGSQRAPPSNY 604
+ ++Y QP S Q++ + Y
Sbjct: 189 TLSQQAAYPQPQS--QQSQQTAY 209
Score = 129 (50.5 bits), Expect = 0.00033, P = 0.00033
Identities = 61/189 (32%), Positives = 74/189 (39%)
Query: 435 GYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEG-HTPS-Y--GAQGDSTQAPPPV- 489
G PQ YG PY QQQG +S G+ G TP Y QG + A +
Sbjct: 5 GKMRPQP-YGGTNPYSQQQGPSSGPQQGHGYPGQPYGSQTPQRYPMAMQGRAQSAMGGLS 63
Query: 490 --QSSAAMGQQG---YGT-GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGS---QVPPQ 540
Q GQQG YG GQ P N S PQ QP Y P SQ+ + Q PQ
Sbjct: 64 YAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQ-QQQPPYSQQPPSQNPHAQPSYQQQPQ 122
Query: 541 SGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQP-PPSSYAQPDSGSQRA 599
S + +Q P + P+ QQSP H Q PP S Q S Q+
Sbjct: 123 SQPPQ--LQASQPPYSQQPSQPPHQQSPTPYPSQQPTTQQHPQSQPPYSQPQAQSPYQQQ 180
Query: 600 PPSNYGAAT 608
P ++T
Sbjct: 181 QPQQPASST 189
Score = 120 (47.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 51/174 (29%), Positives = 66/174 (37%)
Query: 417 PASGYNQQGQG-YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
P+ G G G Y Q+S G Y S YG Y +Q YN+ N + G
Sbjct: 393 PSGGQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPN-ANYPSAGMAGSMNP 451
Query: 476 YGAQGDSTQAPP-PVQSSAAMGQQGYGT-GQQP-SPNTASYPPQ---GATQPSYGVP-PT 528
GA G P P + G+ + + G +P PN A+ PPQ G P G+ T
Sbjct: 452 MGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKT 511
Query: 529 SQSGYGSQVPP---QSGYAGY-GMPQAQKPLANPPAYGQTQQS-PGSAGGYGQP 577
++ V Q+ GY M Q PP YGQ S G G P
Sbjct: 512 QETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPP-YGQGINSMAGMINPQGPP 564
Score = 111 (44.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 59/205 (28%), Positives = 74/205 (36%)
Query: 412 SYSQPPASGYNQQGQGYAQDSY-GGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
SY +P Y + D + P G G PY + G G GNV ++
Sbjct: 841 SY-EPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGD--PYSRAAG----PGLGNVAMGPRQ 893
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQG-YGTGQQPSPNTA-SYPPQGATQPSYGVPPT 528
H P YG D + P + G +G GTG P PN S P G PS PP
Sbjct: 894 -HYP-YGGPYDRVRTEPGI------GPEGNMGTGA-PQPNLMPSNPDSGMYSPSR-YPPQ 943
Query: 529 SQS------GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSA--GGYGQPGYS 580
Q YG+Q Q +G P Q + Y Q QQ+ G YG P
Sbjct: 944 QQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTM-----YQQQQQNYKRPMDGTYGPPAKR 998
Query: 581 HS---QPPPSSYAQPDSGSQRAPPS 602
H P S Q Q+ PP+
Sbjct: 999 HEGEMYSVPYSTGQGQPQQQQLPPA 1023
Score = 101 (40.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 61/209 (29%), Positives = 76/209 (36%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G YS P ++G QGQ Q P S A P QQ YN YGN +
Sbjct: 1001 GEMYSVPYSTG---QGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQ---YGNAYPATA 1054
Query: 470 EGHT---PSYGAQG--------DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPP--Q 516
T P+ G Q D APP + M Q G Q S A Q
Sbjct: 1055 AAATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQ 1114
Query: 517 GATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ 576
G +Y T++ GS PQ G A +G+ + + L + P + G Q
Sbjct: 1115 GRNDMTYNY--TNRQSTGSA--PQ-GPAYHGVNRTDEMLHTDQR--ANHEGPWPSHGTRQ 1167
Query: 577 PGYSHSQP-PPSSYAQPDSGSQRAPPSNY 604
P Y S P PP + R PPSNY
Sbjct: 1168 PPYGPSAPLPPMT---------RPPPSNY 1187
Score = 94 (38.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 28/69 (40%), Positives = 32/69 (46%)
Query: 306 YSQQG---YQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQP- 361
Y+QQ Q +PP S P QP Y QP + P PQ SQPPY PSQP
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQNPHAQPSYQQ-QPQSQP---PQLQASQPPYSQQPSQPP 143
Query: 362 ---TPGGYP 367
+P YP
Sbjct: 144 HQQSPTPYP 152
Score = 94 (38.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 58/201 (28%), Positives = 72/201 (35%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
Y Y P + G G + G APQ P + G S + Y Q+
Sbjct: 895 YPYGGPYDRVRTEPGIG--PEGNMGTGAPQPNL---MPSNPDSGMYSPSRYPPQQQQQQQ 949
Query: 471 GHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQ 530
H SYG Q STQ P S QQ T Q P G +YG P
Sbjct: 950 RHD-SYGNQF-STQGTP--SGSPFPSQQT--TMYQQQQQNYKRPMDG----TYGPPAKRH 999
Query: 531 SGYGSQVPPQSGYAGYGMPQAQK-PLANP-PAYGQTQQSPGSAGG-YGQPGYSHSQPPPS 587
G VP +G G PQ Q+ P A P PA Q P Y Q Y ++ P +
Sbjct: 1000 EGEMYSVPYSTGQ---GQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQ--YGNAYPATA 1054
Query: 588 SYA---QPDSGSQRAPPSNYG 605
+ A +P G Q P +G
Sbjct: 1055 AAATERRPAGGPQNQFPFQFG 1075
Score = 88 (36.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 41/146 (28%), Positives = 50/146 (34%)
Query: 468 SQEGHTPSYGAQGDSTQAP-PPVQSSAAMGQQGYGTGQQPSP----NTASYPPQGATQPS 522
S G + S G Q + Q+P P S G +G SP + S P A P
Sbjct: 279 STSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPG 338
Query: 523 YGVPPTSQSGYGSQVP-PQSGYAGYGMPQAQKPLANP--PAYGQTQQSPGSAGGYGQPGY 579
+PP SG + P + + NP P Y Q PGSA QP
Sbjct: 339 NQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQ-RNPQMPQYSSPQ--PGSALSPRQPSG 395
Query: 580 SHSQPPPSSYAQPDSGSQRAPPSNYG 605
SY Q GS S YG
Sbjct: 396 GQMHTGMGSYQQNSMGSYGPQGSQYG 421
Score = 83 (34.3 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 38/138 (27%), Positives = 54/138 (39%)
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
E P A DS ++ P +Q + G G G Q +T+S +G PPT
Sbjct: 728 EDPPPDIFAASDSKKSQPKIQPPSPAGS-GSMQGPQTPQSTSSSMAEGGDLK----PPTP 782
Query: 530 QSGYGSQVPPQSGYAGYGMP-QAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSS 588
S SQ+PP G + Q P + P + Q + S GY QP + S
Sbjct: 783 ASTPHSQIPPLPGMRSNSVGIQDAFPDGSDPTF-QKRNSMTPNPGY-QPSMNTSDMMGRM 840
Query: 589 YAQPDS---GSQRAPPSN 603
+P+ GS R P +
Sbjct: 841 SYEPNKDPYGSMRKAPGS 858
Score = 80 (33.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 26/71 (36%), Positives = 32/71 (45%)
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQ--PGAYPGQTP---QYNMSQP 352
+NP Y QQ Q++PP + P QQP Q P YP Q P Q+ SQP
Sbjct: 109 QNPHAQPSYQQQP-QSQPPQLQASQ-PPYSQQPSQPPHQQSPTPYPSQQPTTQQHPQSQP 166
Query: 353 PYGGYPSQPTP 363
PY P +P
Sbjct: 167 PYS-QPQAQSP 176
Score = 74 (31.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 24/66 (36%), Positives = 26/66 (39%)
Query: 312 QARPPTSWGTPGAPSMQQ-PGYGYVQPGAY--PGQTPQYNMS-------QPPYGGYPSQP 361
Q R ++ G G QQ P YG P Y GQTP YN QPPY P
Sbjct: 52 QGRAQSAMG--GLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQ 109
Query: 362 TPGGYP 367
P P
Sbjct: 110 NPHAQP 115
Score = 60 (26.2 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 27/77 (35%), Positives = 29/77 (37%)
Query: 300 PAMAGG---YSQQ-GYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQ------YNM 349
P GG YSQQ G + P G PG P Q Y P A G+ Y
Sbjct: 9 PQPYGGTNPYSQQQGPSSGPQQGHGYPGQPYGSQTPQRY--PMAMQGRAQSAMGGLSYAQ 66
Query: 350 SQPPYGGYPSQPTPGGY 366
PPYG Q P GY
Sbjct: 67 QIPPYG----QQGPSGY 79
Score = 59 (25.8 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 28/74 (37%), Positives = 30/74 (40%)
Query: 304 GGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGA-YPGQTPQ-YNMS-----QPPYGG 356
G Q Y P S G S Q G+GY PG Y QTPQ Y M+ Q GG
Sbjct: 5 GKMRPQPYGGTNPYSQ-QQGPSSGPQQGHGY--PGQPYGSQTPQRYPMAMQGRAQSAMGG 61
Query: 357 --YPSQPTPGGYPG 368
Y Q P G G
Sbjct: 62 LSYAQQIPPYGQQG 75
>UNIPROTKB|C9J0A4 [details] [associations]
symbol:PCBP4 "Poly(rC)-binding protein 4" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC115284 HOGENOM:HOG000182823
HGNC:HGNC:8652 IPI:IPI00385206 ProteinModelPortal:C9J0A4 SMR:C9J0A4
STRING:C9J0A4 Ensembl:ENST00000471622 ArrayExpress:C9J0A4
Bgee:C9J0A4 Uniprot:C9J0A4
Length = 323
Score = 152 (58.6 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 60/220 (27%), Positives = 99/220 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLI---- 195
VG IIGK GET+K ++ QS A+I ++ + P R + G+ + A +I
Sbjct: 29 VGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKL 83
Query: 196 NDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
++ L A + G + +T + IP ++ G +IGK G IK ++ TGA++Q
Sbjct: 84 DEDLCAAPANGGNVSRPPVT-------LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 256 VIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIR------NPAMAGGY--- 306
V LP STER V + G + I + + VI E+ + +P+++ G
Sbjct: 137 VAGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLL 193
Query: 307 -SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP 345
+ QG+ + TP + Q + P A P P
Sbjct: 194 SANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVP 233
>UNIPROTKB|Q9NZI8 [details] [associations]
symbol:IGF2BP1 "Insulin-like growth factor 2 mRNA-binding
protein 1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006403 "RNA localization" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0043197 "dendritic
spine" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0010610 "regulation
of mRNA stability involved in response to stress" evidence=IMP]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0045182 "translation
regulator activity" evidence=IDA] [GO:0048027 "mRNA 5'-UTR binding"
evidence=IDA] [GO:0042035 "regulation of cytokine biosynthetic
process" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005829 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0017148 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0043197 GO:GO:0045182 GO:GO:0030027
GO:GO:0003723 GO:GO:0048027 GO:GO:0003730 GO:GO:0042035
GO:GO:0010494 GO:GO:0070937 GO:GO:0070934 HOVERGEN:HBG052725
CTD:10642 eggNOG:NOG249985 HOGENOM:HOG000000675 OMA:EQETVHV
OrthoDB:EOG405S0T GO:GO:0010610 EMBL:AF198254 EMBL:DQ227344
EMBL:AC091133 EMBL:AC105030 IPI:IPI00008557 IPI:IPI00930694
RefSeq:NP_001153895.1 RefSeq:NP_006537.3 UniGene:Hs.144936 PDB:3KRM
PDBsum:3KRM ProteinModelPortal:Q9NZI8 SMR:Q9NZI8 DIP:DIP-38139N
IntAct:Q9NZI8 STRING:Q9NZI8 PhosphoSite:Q9NZI8 DMDM:296434536
PaxDb:Q9NZI8 PeptideAtlas:Q9NZI8 PRIDE:Q9NZI8 DNASU:10642
Ensembl:ENST00000290341 Ensembl:ENST00000431824 GeneID:10642
KEGG:hsa:10642 UCSC:uc002iom.3 GeneCards:GC17P047074
H-InvDB:HIX0013955 HGNC:HGNC:28866 HPA:HPA021367 MIM:608288
neXtProt:NX_Q9NZI8 PharmGKB:PA143485501 InParanoid:Q9NZI8
PhylomeDB:Q9NZI8 EvolutionaryTrace:Q9NZI8 GenomeRNAi:10642
NextBio:40447 ArrayExpress:Q9NZI8 Bgee:Q9NZI8 CleanEx:HS_IGF2BP1
CleanEx:HS_ZBP1 Genevestigator:Q9NZI8 GO:GO:0006403 Uniprot:Q9NZI8
Length = 577
Score = 158 (60.7 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 61/215 (28%), Positives = 98/215 (45%)
Query: 104 PPSDLKSIPAPSAIP--VSYGGYQSMGTSKKIE--IPNIRVGVIIGKSGETIKYLQLQSG 159
P S P PS++ Y + + ++ IP VG IIGK G+ IK L +
Sbjct: 377 PASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFAS 436
Query: 160 AKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAG 219
A I++ D S R V + G PE KA+ I L E G + T
Sbjct: 437 ASIKIAPPETPD--SKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLET---- 490
Query: 220 SDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSE 279
H +++P + G VIGKGG+T+ +Q T A + V+P P D + + V+I G
Sbjct: 491 --H--IRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP-DENDQVIVKIIGHFY 544
Query: 280 QIESAKQLVNEVISENRIRNPAMAGGYSQQGYQAR 314
+ A++ + +++++ + ++ G S Q QAR
Sbjct: 545 ASQMAQRKIRDILAQVKQQHQK---GQSNQA-QAR 575
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 58/210 (27%), Positives = 94/210 (44%)
Query: 88 ENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKS 147
ENG G GF S + P + P Q + ++ +P VG IIGK
Sbjct: 164 ENGRRG------GFGSRGQPRQGSPVAAGAPAKQ---QQVDIPLRLLVPTQYVGAIIGKE 214
Query: 148 GETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL-AEAESGG 206
G TI+ + Q+ +KI V R A + +++ + TPE + A ++I +++ EA+
Sbjct: 215 GATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSSACKMILEIMHKEAKD-- 270
Query: 207 SGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
T A D +KI NN VG +IGK G +K ++ T +I + L
Sbjct: 271 --------TKTA--DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQ-DLT 319
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVISE 294
+ ERT+ + G E A+Q + + + E
Sbjct: 320 LYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 44 (20.5 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 15 KRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
+ YE+ S + G + + P S ++VPPP
Sbjct: 348 REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPP 386
>UNIPROTKB|O42254 [details] [associations]
symbol:IGF2BP1 "Insulin-like growth factor 2 mRNA-binding
protein 1" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0010610 "regulation
of mRNA stability involved in response to stress" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0070934
"CRD-mediated mRNA stabilization" evidence=IEA] [GO:0070937
"CRD-mediated mRNA stability complex" evidence=ISS] [GO:0003730
"mRNA 3'-UTR binding" evidence=ISS] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 GO:GO:0005886 GO:GO:0005634
GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0045182
GO:GO:0048027 GO:GO:0003730 GO:GO:0010494 GO:GO:0070937
GO:GO:0070934 HSSP:Q9Y6M1 HOVERGEN:HBG052725 EMBL:AF026527
IPI:IPI00576155 RefSeq:NP_990402.1 UniGene:Gga.567
ProteinModelPortal:O42254 SMR:O42254 Ensembl:ENSGALT00000001975
GeneID:395953 KEGG:gga:395953 CTD:10642 eggNOG:NOG249985
GeneTree:ENSGT00530000063171 HOGENOM:HOG000000675 InParanoid:O42254
OMA:EQETVHV OrthoDB:EOG405S0T NextBio:20816018 GO:GO:0010610
Uniprot:O42254
Length = 576
Score = 153 (58.9 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 54/194 (27%), Positives = 89/194 (45%)
Query: 105 PSDLKSIPAPSAIPVSYGGYQSMGTSKK----IEIPNIRVGVIIGKSGETIKYLQLQSGA 160
P+ ++P P + Y S ++ + IP VG IIGK G+ IK L + A
Sbjct: 377 PASSNAVPPPPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASA 436
Query: 161 KIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGS 220
I++ D S R V + G PE KA+ I L E G + T
Sbjct: 437 SIKIAPPETPD--SKVRMVVITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLET----- 489
Query: 221 DHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQ 280
H +++P + G VIGKGG+T+ +Q T A + V+P P D + + V+I G
Sbjct: 490 -H--IRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP-DENEQVIVKIIGHFYA 544
Query: 281 IESAKQLVNEVISE 294
+ A++ + +++++
Sbjct: 545 SQMAQRKIRDILAQ 558
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 88 ENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKS 147
ENG G GF + + + P + PV Q + ++ +P VG IIGK
Sbjct: 164 ENGRRG------GFGARGAPRQGSPVTAGAPVKQ---QPVDIPLRLLVPTQYVGAIIGKE 214
Query: 148 GETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLA-EAESGG 206
G TI+ + Q+ +KI V R A + +++ + TPE + A ++I +++ EA+
Sbjct: 215 GATIRNITKQTQSKIDVHRKENA--GAAEKAISIHSTPEGCSAACKMILEIMQKEAKD-- 270
Query: 207 SGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
T A D +KI NN VG +IGK G +K ++ T +I + L
Sbjct: 271 --------TKTA--DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQ-DLT 319
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVISE 294
+ ERT+ + G+ E A+Q + + + E
Sbjct: 320 LYNPERTITVKGSIENCCKAEQEIMKKVRE 349
Score = 49 (22.3 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 15 KRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
+ YE+ S + G + + P S N+VPPP
Sbjct: 348 REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPP 386
>UNIPROTKB|E2R9Z1 [details] [associations]
symbol:E2R9Z1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 EMBL:AAEX03004085
Ensembl:ENSCAFT00000019394 Uniprot:E2R9Z1
Length = 561
Score = 156 (60.0 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 59/190 (31%), Positives = 78/190 (41%)
Query: 418 ASGYNQQGQGYAQDSYGGYHA-PQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSY 476
++ Y+ Q A Y Y A P GY QA QQ Y + +++ T Q T +Y
Sbjct: 3 STDYSTYSQAAAYQGYSAYTAQPTQGYAQATQAYGQQSYGTCRQPTDISYT-QAQTTVTY 61
Query: 477 GAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ 536
G +TQ PP + + Q Y Q T SY AT + +QS YG+Q
Sbjct: 62 G---QTTQ--PPAGYTTPIAPQAYSQPVQ-GYGTGSYDTITATLINIQASYAAQSAYGTQ 115
Query: 537 VPPQSGYAGYGM-PQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSG 595
P Y +G P A P A P Y TQ + Y Q S + P SY Q S
Sbjct: 116 -P---AYPAFGQQPAATTP-ARPQRYSSTQPTSYDQSSYSQQLLSATYGQPGSYGQQSSY 170
Query: 596 SQRAPPSNYG 605
Q+ S+YG
Sbjct: 171 GQQ---SSYG 177
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 66/201 (32%), Positives = 77/201 (38%)
Query: 410 GYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQS-GYGQA-APYDQQQGYNSAAGYGN-VN 465
GYS Y+ P GY Q Q Y Q SYG P Y QA Q AGY +
Sbjct: 17 GYSAYTAQPTQGYAQATQAYGQQSYGTCRQPTDISYTQAQTTVTYGQTTQPPAGYTTPIA 76
Query: 466 NTSQEGHTPSYGAQG-DSTQAPP-PVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSY 523
+ YG D+ A +Q+S A Q YGT QP+ YP G QP+
Sbjct: 77 PQAYSQPVQGYGTGSYDTITATLINIQASYA-AQSAYGT--QPA-----YPAFGQ-QPAA 127
Query: 524 GVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ 583
P Q Y S P + Y P +YGQ Q S G YGQ Q
Sbjct: 128 TTPARPQR-YSSTQPTSYDQSSYSQQLLSATYGQPGSYGQ-QSSYGQQSSYGQ------Q 179
Query: 584 PPPSSYAQPDSGSQRAPPSNY 604
PP S Q +GS PS Y
Sbjct: 180 PPTSCPLQ--TGSYSYAPSQY 198
>UNIPROTKB|E1BVU6 [details] [associations]
symbol:LOC100858906 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0003723
GeneTree:ENSGT00550000074311 OMA:FWAPSVL EMBL:AADN02031620
EMBL:AADN02034412 EMBL:AADN02034413 EMBL:AADN02034414
IPI:IPI00682929 Ensembl:ENSGALT00000007004 Uniprot:E1BVU6
Length = 339
Score = 152 (58.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 71/251 (28%), Positives = 107/251 (42%)
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
VS GG T + + + VG IIGK G + QSGA+I ++ N P R
Sbjct: 5 VSEGGLNVTLTIRLL-MHGKEVGSIIGKMGCLHVVTREQSGARINISEG-----NCPERI 58
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGK 238
V + G + I KA +I + E + ++ + +P ++ G +IGK
Sbjct: 59 VTITGPTDAIFKAFAMI---AYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGK 115
Query: 239 GGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQI-ESAKQLVNEVISENRI 297
GG IK ++ TGA++QV LP STER V I GT + I + KQ+ V+ +
Sbjct: 116 GGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQIC--VVM---L 167
Query: 298 RNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGY 357
+P + A P + A ++Q Y P + Q M Q P+
Sbjct: 168 ESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLT-KLHQLAMQQTPFTPL 225
Query: 358 PSQPTPGGYPG 368
Q TP +PG
Sbjct: 226 -GQTTPA-FPG 234
Score = 116 (45.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
++ ++ IPN +G IIG+ G I ++ SGA+I++ TE S R + + GTP I
Sbjct: 262 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG---SSERQITITGTPANI 318
Query: 189 AKAEQLINDVLAEAESG 205
+ A+ LIN L +G
Sbjct: 319 SLAQYLINARLTSEVTG 335
Score = 43 (20.2 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 103 SPP--SDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPN 137
SPP + + P P++ PV + G Q+ + IP+
Sbjct: 169 SPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 205
>UNIPROTKB|K7GQ87 [details] [associations]
symbol:RFC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GeneTree:ENSGT00530000063171 EMBL:CU582974
Ensembl:ENSSSCT00000035397 Uniprot:K7GQ87
Length = 498
Score = 155 (59.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 65/247 (26%), Positives = 114/247 (46%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
+I +P VG IIGK G TIK + Q+ +++ + R + + + V + TPE ++A
Sbjct: 96 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSEA 153
Query: 192 EQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQAR 249
++I +++ + E+ + + ++ +KI N VG +IGK G +K ++
Sbjct: 154 CRMILEIM-QKEADETKL----------AEEIPLKILAHNGLVGRLIGKEGRNLKKIEHE 202
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSE-----QIESAKQL----VNEVISENRIRN- 299
TG +I + L + ERT+ + GT E +IE K+L N++++ N+ N
Sbjct: 203 TGTKITISSLQ-DLSIYNPERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANL 261
Query: 300 -PAM---AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQTPQYNMSQ-PP 353
P + A G G PP + G GAP P + + G + P + P
Sbjct: 262 IPGLNLSALGIFSTGLSVLPPPA-GPRGAPPAP-PYHPFATHSGYFSSLYPPHQFGPFPH 319
Query: 354 YGGYPSQ 360
+ YP Q
Sbjct: 320 HHSYPEQ 326
Score = 151 (58.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 52/175 (29%), Positives = 86/175 (49%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
IP VG IIGK G IK L +GA I++ D++ R V + G PE KA+
Sbjct: 333 IPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSE--RMVIITGPPEAQFKAQGR 390
Query: 195 INDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
I L E E+ + +L H +++P++ G VIGKGG+T+ +Q T A +
Sbjct: 391 IFGKLKE-ENFFNPKEEVKLEA-----H--IRVPSSTAGRVIGKGGKTVNELQNLTSAEV 442
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
++P P D + E V+I G ++A++ + E++ + + + G + Q
Sbjct: 443 -IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQKYPQGVASQ 495
>UNIPROTKB|E1BT66 [details] [associations]
symbol:TAF15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00530000063105
OMA:YGNQGSQ EMBL:AADN02025953 EMBL:AADN02025954 IPI:IPI00575015
ProteinModelPortal:E1BT66 Ensembl:ENSGALT00000003204 Uniprot:E1BT66
Length = 443
Score = 154 (59.3 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 65/205 (31%), Positives = 84/205 (40%)
Query: 412 SYSQPPA-SGYNQQGQG--YAQDSYGGYHAP----QSGYGQAAPYDQQQGYNSAAGYGNV 464
SY Q SGY Q G Y Q SYG YH Q+GYGQ GY+ + Y N
Sbjct: 27 SYGQTQGYSGYGQSGDNSSYGQ-SYGNYHGNYGQNQTGYGQ-----DSHGYDDESSYDNQ 80
Query: 465 NNTS--QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS 522
N +S Q+ ++ + G Q S++ SS+ Q GYG Q + Y Q +
Sbjct: 81 NQSSYNQQSYS-NQGQQKGSSRGGRGSYSSSYDQQSGYGH-QGSYDQQSGYGHQSSYDQK 138
Query: 523 YGVPPTSQSGYG-SQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS- 580
G QS YG SQ QS Y +Q YG+ + G + G G+ GY
Sbjct: 139 SGYNQ-HQSSYGHSQQSYQSQKGSYSH-NSQDDRREKSRYGEDNRGYGGSQGGGRGGYDM 196
Query: 581 HSQPPPSSYAQPDSGSQRAPPSNYG 605
+ S Y SG R NYG
Sbjct: 197 DGRGHMSGY----SGGDRGGFKNYG 217
Score = 138 (53.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 58/177 (32%), Positives = 75/177 (42%)
Query: 418 ASGYNQQGQGYAQDSYGGY-HAPQSGYGQAAPYDQ--QQGYNSAAG--YGNVNNTSQEGH 472
AS GQ Q SY Y + YGQ Y Q G NS+ G YGN + +
Sbjct: 2 ASDSGSYGQSGGQQSYSSYGNQGNQSYGQTQGYSGYGQSGDNSSYGQSYGNYHGNYGQNQ 61
Query: 473 TPSYG--AQGDSTQAPPPVQSSAAMGQQGYGT-GQQPSPNTASYPPQGATQPSYGVPPTS 529
T YG + G ++ Q+ ++ QQ Y GQQ + +G+ SY
Sbjct: 62 T-GYGQDSHGYDDESSYDNQNQSSYNQQSYSNQGQQKGSSRGG---RGSYSSSYD----Q 113
Query: 530 QSGYGSQ--VPPQSGYAGYGMPQAQKPLANP--PAYGQTQQSPGSAGGYGQPGYSHS 582
QSGYG Q QSGY G+ QK N +YG +QQS S G YSH+
Sbjct: 114 QSGYGHQGSYDQQSGY-GHQSSYDQKSGYNQHQSSYGHSQQSYQSQKG----SYSHN 165
Score = 123 (48.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 58/206 (28%), Positives = 73/206 (35%)
Query: 303 AGGYSQQGYQARPPTSWGTPGAPSM-QQPGY-GYVQPGAYPGQTPQYNMSQPPY-GGYPS 359
+G Y Q G Q + +S+G G S Q GY GY Q G Y S Y G Y
Sbjct: 5 SGSYGQSGGQ-QSYSSYGNQGNQSYGQTQGYSGYGQSG----DNSSYGQSYGNYHGNYGQ 59
Query: 360 QPTPGGYPGNWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSYSQPPAS 419
T GY G D YS S S
Sbjct: 60 NQT--GY-GQ-DSHGYDDESSYDNQNQSSYNQQSYSNQGQQKGSSRGGRGSYSSSYDQQS 115
Query: 420 GYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNS-AAGYGNVNNTSQEGHTPSYGA 478
GY QG Y Q QSGYG + YDQ+ GYN + YG+ SQ+ + G+
Sbjct: 116 GYGHQGS-YDQ---------QSGYGHQSSYDQKSGYNQHQSSYGH----SQQSYQSQKGS 161
Query: 479 QGDSTQAPPPVQSSAAMGQQGYGTGQ 504
++Q +S +GYG Q
Sbjct: 162 YSHNSQDDRREKSRYGEDNRGYGGSQ 187
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 52/182 (28%), Positives = 70/182 (38%)
Query: 438 APQSG-YGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDST---QAPPPVQSSA 493
A SG YGQ+ QQ Y+S GN + +G++ YG GD++ Q+ +
Sbjct: 2 ASDSGSYGQSGG---QQSYSSYGNQGNQSYGQTQGYS-GYGQSGDNSSYGQSYGNYHGNY 57
Query: 494 AMGQQGYGTGQQPSPNTASYPPQGAT---QPSY---GVPPTSQSG----YGSQVPPQSGY 543
Q GYG + +SY Q + Q SY G S G Y S QSGY
Sbjct: 58 GQNQTGYGQDSHGYDDESSYDNQNQSSYNQQSYSNQGQQKGSSRGGRGSYSSSYDQQSGY 117
Query: 544 AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSN 603
G Q + +Y Q YG S+ Q SY+ +S R S
Sbjct: 118 GHQGSYDQQSGYGHQSSYDQKSGYNQHQSSYGHSQQSY-QSQKGSYSH-NSQDDRREKSR 175
Query: 604 YG 605
YG
Sbjct: 176 YG 177
Score = 39 (18.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 569 GSAGGYGQPG 578
GS GGYG+ G
Sbjct: 339 GSRGGYGRGG 348
>UNIPROTKB|K7GKD3 [details] [associations]
symbol:RFC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 Gene3D:3.30.70.330
GeneTree:ENSGT00530000063171 EMBL:CU582974
Ensembl:ENSSSCT00000033522 Uniprot:K7GKD3
Length = 520
Score = 155 (59.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 65/247 (26%), Positives = 114/247 (46%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
+I +P VG IIGK G TIK + Q+ +++ + R + + + V + TPE ++A
Sbjct: 118 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSEA 175
Query: 192 EQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQAR 249
++I +++ + E+ + + ++ +KI N VG +IGK G +K ++
Sbjct: 176 CRMILEIM-QKEADETKL----------AEEIPLKILAHNGLVGRLIGKEGRNLKKIEHE 224
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSE-----QIESAKQL----VNEVISENRIRN- 299
TG +I + L + ERT+ + GT E +IE K+L N++++ N+ N
Sbjct: 225 TGTKITISSLQ-DLSIYNPERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANL 283
Query: 300 -PAM---AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQTPQYNMSQ-PP 353
P + A G G PP + G GAP P + + G + P + P
Sbjct: 284 IPGLNLSALGIFSTGLSVLPPPA-GPRGAPPAP-PYHPFATHSGYFSSLYPPHQFGPFPH 341
Query: 354 YGGYPSQ 360
+ YP Q
Sbjct: 342 HHSYPEQ 348
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 52/175 (29%), Positives = 86/175 (49%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
IP VG IIGK G IK L +GA I++ D++ R V + G PE KA+
Sbjct: 355 IPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSE--RMVIITGPPEAQFKAQGR 412
Query: 195 INDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
I L E E+ + +L H +++P++ G VIGKGG+T+ +Q T A +
Sbjct: 413 IFGKLKE-ENFFNPKEEVKLEA-----H--IRVPSSTAGRVIGKGGKTVNELQNLTSAEV 464
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
++P P D + E V+I G ++A++ + E++ + + + G + Q
Sbjct: 465 -IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQKYPQGVASQ 517
>UNIPROTKB|F1SFK0 [details] [associations]
symbol:RFC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0044430
"cytoskeletal part" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003730 "mRNA
3'-UTR binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048027 GO:GO:0003730 GeneTree:ENSGT00530000063171
GO:GO:0044430 OMA:KQQEQKH EMBL:CU582974 Ensembl:ENSSSCT00000012907
Uniprot:F1SFK0
Length = 524
Score = 155 (59.6 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 65/247 (26%), Positives = 114/247 (46%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
+I +P VG IIGK G TIK + Q+ +++ + R + + + V + TPE ++A
Sbjct: 122 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSEA 179
Query: 192 EQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQAR 249
++I +++ + E+ + + ++ +KI N VG +IGK G +K ++
Sbjct: 180 CRMILEIM-QKEADETKL----------AEEIPLKILAHNGLVGRLIGKEGRNLKKIEHE 228
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSE-----QIESAKQL----VNEVISENRIRN- 299
TG +I + L + ERT+ + GT E +IE K+L N++++ N+ N
Sbjct: 229 TGTKITISSLQ-DLSIYNPERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANL 287
Query: 300 -PAM---AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQTPQYNMSQ-PP 353
P + A G G PP + G GAP P + + G + P + P
Sbjct: 288 IPGLNLSALGIFSTGLSVLPPPA-GPRGAPPAP-PYHPFATHSGYFSSLYPPHQFGPFPH 345
Query: 354 YGGYPSQ 360
+ YP Q
Sbjct: 346 HHSYPEQ 352
Score = 151 (58.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 52/175 (29%), Positives = 86/175 (49%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
IP VG IIGK G IK L +GA I++ D++ R V + G PE KA+
Sbjct: 359 IPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSE--RMVIITGPPEAQFKAQGR 416
Query: 195 INDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
I L E E+ + +L H +++P++ G VIGKGG+T+ +Q T A +
Sbjct: 417 IFGKLKE-ENFFNPKEEVKLEA-----H--IRVPSSTAGRVIGKGGKTVNELQNLTSAEV 468
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
++P P D + E V+I G ++A++ + E++ + + + G + Q
Sbjct: 469 -IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQKYPQGVASQ 521
>MGI|MGI:1890357 [details] [associations]
symbol:Igf2bp1 "insulin-like growth factor 2 mRNA binding
protein 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006403 "RNA localization"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010610
"regulation of mRNA stability involved in response to stress"
evidence=ISO] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0045182 "translation
regulator activity" evidence=ISO] [GO:0048027 "mRNA 5'-UTR binding"
evidence=ISO] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
EMBL:AF061569 MGI:MGI:1890357 GO:GO:0005886 GO:GO:0005634
GO:GO:0017148 GO:GO:0000166 GO:GO:0030425 Gene3D:3.30.70.330
GO:GO:0045182 GO:GO:0048027 GO:GO:0003730 EMBL:AL603682
GO:GO:0010494 GO:GO:0070937 GO:GO:0070934 HSSP:Q9Y6M1
HOVERGEN:HBG052725 CTD:10642 eggNOG:NOG249985
GeneTree:ENSGT00530000063171 HOGENOM:HOG000000675 OMA:EQETVHV
OrthoDB:EOG405S0T GO:GO:0010610 GO:GO:0006403 EMBL:AK044850
EMBL:AK013940 EMBL:AL606704 EMBL:BC051679 IPI:IPI00131056
RefSeq:NP_034081.1 UniGene:Mm.294769 UniGene:Mm.490105
ProteinModelPortal:O88477 SMR:O88477 DIP:DIP-48578N STRING:O88477
PhosphoSite:O88477 PaxDb:O88477 PRIDE:O88477
Ensembl:ENSMUST00000013559 GeneID:140486 KEGG:mmu:140486
UCSC:uc007lay.2 InParanoid:O88477 NextBio:369796 Bgee:O88477
Genevestigator:O88477 Uniprot:O88477
Length = 577
Score = 157 (60.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 55/195 (28%), Positives = 89/195 (45%)
Query: 104 PPSDLKSIPAPSAIP--VSYGGYQSMGTSKKIE--IPNIRVGVIIGKSGETIKYLQLQSG 159
P S P PS++ Y + + ++ IP VG IIGK G+ IK L +
Sbjct: 377 PASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFAS 436
Query: 160 AKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAG 219
A I++ D S R V + G PE KA+ I L E G + T
Sbjct: 437 ASIKIAPPETPD--SKVRMVVITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLET---- 490
Query: 220 SDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSE 279
H +++P + G VIGKGG+T+ +Q T A + V+P P D + + V+I G
Sbjct: 491 --H--IRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP-DENDQVIVKIIGHFY 544
Query: 280 QIESAKQLVNEVISE 294
+ A++ + +++++
Sbjct: 545 ASQMAQRKIRDILAQ 559
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 58/210 (27%), Positives = 94/210 (44%)
Query: 88 ENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKS 147
ENG G GF S + P + P Q + ++ +P VG IIGK
Sbjct: 164 ENGRRG------GFGSRGQPRQGSPVAAGAPAKQ---QPVDIPLRLLVPTQYVGAIIGKE 214
Query: 148 GETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL-AEAESGG 206
G TI+ + Q+ +KI V R A + +++ + TPE + A ++I +++ EA+
Sbjct: 215 GATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSSACKMILEIMHKEAKD-- 270
Query: 207 SGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
T A D +KI NN VG +IGK G +K ++ T +I + L
Sbjct: 271 --------TKTA--DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQ-DLT 319
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVISE 294
+ ERT+ + G E A+Q + + + E
Sbjct: 320 LYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 44 (20.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 15 KRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
+ YE+ S + G + + P S ++VPPP
Sbjct: 348 REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPP 386
>TAIR|locus:2119782 [details] [associations]
symbol:MORF1 "multiple organellar RNA editing factor 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:1900864 "mitochondrial RNA modification"
evidence=IMP] [GO:1900865 "chloroplast RNA modification"
evidence=IMP] GO:GO:0005739 GO:GO:0009507 EMBL:CP002687
EMBL:AL021637 EMBL:AL161552 HOGENOM:HOG000243016 EMBL:BT002761
IPI:IPI00534157 PIR:T04886 RefSeq:NP_193735.1 UniGene:At.32756
STRING:O49429 PaxDb:O49429 PRIDE:O49429 EnsemblPlants:AT4G20020.1
GeneID:827747 KEGG:ath:AT4G20020 TAIR:At4g20020 eggNOG:NOG285776
InParanoid:O49429 OMA:HWLITMD PhylomeDB:O49429
ProtClustDB:CLSN2685724 Genevestigator:O49429 GO:GO:1900865
GO:GO:1900864 Uniprot:O49429
Length = 419
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 66/201 (32%), Positives = 82/201 (40%)
Query: 417 PASGYNQQGQGYAQDSY-GGY--HAP---QSGYGQAAP-YDQQQGYNSAAGYGNVNNTSQ 469
P S + Q + Y D Y G H P QSG + P +D+ G + G N +Q
Sbjct: 165 PDSYIDPQNKEYGGDKYENGVITHRPPPIQSGRARPRPRFDRSGG--GSGGPQNFQRNTQ 222
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
G P G S P Q A GQ G GT Q P P Y QG P PP
Sbjct: 223 YGQQPPMQGGGGSYG---PQQGYATPGQ-GQGT-QAPPPFQGGYN-QGPRSP----PPPY 272
Query: 530 QSGY----GSQVPP-QSGY---AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSH 581
Q+GY GS VPP Q+GY G +P Q ++ G S G GGY Q G +
Sbjct: 273 QAGYNQGQGSPVPPYQAGYNQVQGSPVPPYQGTQSSYGQGGSGNYSQGPQGGYNQGGPRN 332
Query: 582 SQPPPSSYAQPDSGSQRAPPS 602
P + P SG+ P+
Sbjct: 333 YNPQGAGNFGPASGAGNLGPA 353
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 64/193 (33%), Positives = 76/193 (39%)
Query: 419 SGYNQQG-QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYG 477
SG G Q + +++ G P G G + Y QQGY + G G + P G
Sbjct: 207 SGGGSGGPQNFQRNTQYGQQPPMQGGGGS--YGPQQGY-ATPGQGQ----GTQAPPPFQG 259
Query: 478 AQGDSTQAPPPVQSSAAMGQQGYGTGQ-QP-SPNTASY--------PPQGATQPSYGVPP 527
++PPP Q GY GQ P P A Y PP TQ SYG
Sbjct: 260 GYNQGPRSPPPPY------QAGYNQGQGSPVPPYQAGYNQVQGSPVPPYQGTQSSYG--- 310
Query: 528 TSQSGYGSQVPPQSGYAGYGMPQAQKP--LAN-PPAYGQTQQSPG-SAG--GYGQPGYSH 581
SG SQ PQ GY G P+ P N PA G P AG GYGQ GYS
Sbjct: 311 QGGSGNYSQ-GPQGGY-NQGGPRNYNPQGAGNFGPASGAGNLGPAPGAGNPGYGQ-GYSG 367
Query: 582 -SQPPPSSYAQPD 593
Q ++ Q D
Sbjct: 368 PGQEQNQTFPQAD 380
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 61/183 (33%), Positives = 73/183 (39%)
Query: 415 QPPASG----YNQQGQGYAQDSYG-GYHAP---QSGYGQ---AAPYDQQQGYNSAAGYGN 463
QPP G Y Q QGYA G G AP Q GY Q + P Q GYN G G+
Sbjct: 226 QPPMQGGGGSYGPQ-QGYATPGQGQGTQAPPPFQGGYNQGPRSPPPPYQAGYNQ--GQGS 282
Query: 464 VNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQG-YGTGQQPSPNTA---SYPPQGAT 519
Q G+ QG QSS G G Y G Q N +Y PQGA
Sbjct: 283 PVPPYQAGYNQ---VQGSPVPPYQGTQSSYGQGGSGNYSQGPQGGYNQGGPRNYNPQGAG 339
Query: 520 QPSYGVPPTSQSGYGSQVP-PQSGYAGYGMPQA---QKPLANPPAYGQTQQSPGSAGGYG 575
++G P S G G+ P P +G GYG + Q+ P Q + + G
Sbjct: 340 --NFG--PAS--GAGNLGPAPGAGNPGYGQGYSGPGQEQNQTFPQADQRNRDWNNNNPAG 393
Query: 576 QPG 578
QPG
Sbjct: 394 QPG 396
>MGI|MGI:3647826 [details] [associations]
symbol:Gm4736 "predicted gene 4736" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:3647826 GeneTree:ENSGT00540000070914
InterPro:IPR026086 PANTHER:PTHR23203 EMBL:AC132581 IPI:IPI00762068
Ensembl:ENSMUST00000100870 OMA:KPHHRPP Bgee:D3YX21 Uniprot:D3YX21
Length = 301
Score = 135 (52.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 60/186 (32%), Positives = 68/186 (36%)
Query: 434 GGYHAP-QSGYGQAAPYD-QQQGYNSAAG--YGNVNNTS-QEGHTPSYGAQGDSTQAPPP 488
G +H P Q G Q P QQG G+ Q G QG Q PP
Sbjct: 90 GHHHGPPQQGGPQGPPRPGNQQGPPPPGPPPQGSPQQRPPQPGKQQGPPPQGGPQQRPPQ 149
Query: 489 VQSSAAMGQQGYGTGQQPSP-NTASYPPQGATQ----PSYGVPPTSQSGYGSQVPPQSGY 543
+ QG + P P N PPQG Q P P Q G + PPQ G
Sbjct: 150 PGNQQGPPPQGGPQQRPPQPGNQQGPPPQGGPQGPPRPGNQQGPPPQGG-PQERPPQPGN 208
Query: 544 AGYGMPQAQKPLANPPAYGQTQQSP--GSAGGYGQPGYSHSQPPPSSYAQ--PDSGSQRA 599
G P Q L PP G Q P GS G PG + PPP Q P G+Q+
Sbjct: 209 Q-QG-PHPQGGLQGPPRPGNQQGPPPKGSPQGPPMPG-NQQGPPPQEGPQGPPRPGNQQG 265
Query: 600 PPSNYG 605
PP G
Sbjct: 266 PPPQGG 271
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 53/185 (28%), Positives = 66/185 (35%)
Query: 426 QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGY-GNVNNTSQEGHTPSYGAQGDSTQ 484
+G YG +H P+ G P N+ G+ + ++ P +
Sbjct: 35 RGEKSQGYG-HHFPKPPPGGMPPRPPSSDENNDGDEDGSEEDVNRPEGPPQHPPHPGHHH 93
Query: 485 APPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ---PSYGVP--PTSQSGYGSQVPP 539
PP Q G G Q P P PPQG+ Q P G P Q G Q PP
Sbjct: 94 GPP--QQGGPQGPPRPGNQQGPPP--PGPPPQGSPQQRPPQPGKQQGPPPQGG-PQQRPP 148
Query: 540 QSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQ-PPPSSYAQ---PDSG 595
Q G G P P PP G Q P G G P + Q PPP Q P G
Sbjct: 149 QPGNQ-QGPPPQGGPQQRPPQPGNQQGPPPQGGPQGPPRPGNQQGPPPQGGPQERPPQPG 207
Query: 596 SQRAP 600
+Q+ P
Sbjct: 208 NQQGP 212
Score = 115 (45.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 60/188 (31%), Positives = 68/188 (36%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PP G QQ G PQ G Q P Q G G Q G+
Sbjct: 118 PPPQGSPQQRPPQPGKQQGP--PPQGGPQQRPPQPGNQQGPPPQG-GPQQRPPQPGNQQG 174
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYP-PQGATQPSYGVP-PTSQSG- 532
QG Q PP + QG + P P P PQG Q G P P +Q G
Sbjct: 175 PPPQG-GPQGPPRPGNQQGPPPQGGPQERPPQPGNQQGPHPQGGLQ---GPPRPGNQQGP 230
Query: 533 --YGS-QVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGY---GQPGYSHSQPPP 586
GS Q PP G G P + P PP G QQ P GG QPG +H PP
Sbjct: 231 PPKGSPQGPPMPGNQ-QGPPPQEGP-QGPPRPGN-QQGPPPQGGPQRPSQPG-NHQGPPQ 286
Query: 587 -SSYAQPD 593
+ QP+
Sbjct: 287 HGNNEQPN 294
Score = 57 (25.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 25/96 (26%), Positives = 35/96 (36%)
Query: 283 SAKQLVNEVISENRIRNPAMAGGYSQQGYQ---ARPPTSWGTPGAPSMQQPGYGYVQPGA 339
S+ Q +E I+ + + G QGY +PP P PS + G
Sbjct: 14 SSAQRQDEEITYEDSNSQLLERGEKSQGYGHHFPKPPPGGMPPRPPSSDENNDGDEDGSE 73
Query: 340 YPGQTPQYNMSQPPYGGY----PSQPTPGG--YPGN 369
P+ PP+ G+ P Q P G PGN
Sbjct: 74 EDVNRPEGPPQHPPHPGHHHGPPQQGGPQGPPRPGN 109
Score = 42 (19.8 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 18 YEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQD 59
YED + + G+ P P PP +DE D
Sbjct: 25 YEDSNSQLLERGEKSQGYGHHFPKPPPGGMPPRPPSSDENND 66
>UNIPROTKB|G4N5A5 [details] [associations]
symbol:MGG_16887 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 EMBL:CM001233 GO:GO:0003723
RefSeq:XP_003712769.1 ProteinModelPortal:G4N5A5
EnsemblFungi:MGG_16887T0 GeneID:12985187 KEGG:mgr:MGG_16887
Uniprot:G4N5A5
Length = 370
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 62/208 (29%), Positives = 96/208 (46%)
Query: 78 VSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPN 137
V+ EA + G G D P PAP Y Q+ T + I + +
Sbjct: 2 VATEAMTNELAEGIDGLKVND---DEPRLGPDGEPAPKT-DEEYA--QAQLTVRAI-VSS 54
Query: 138 IRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLIND 197
GVIIGK G+ + L+ ++G K V++ + + R + + G E I+KA ++
Sbjct: 55 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHD---RVLTITGGCEGISKAYAVVAR 111
Query: 198 VLAE-AESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQV 256
L E A S G G V G+ + I +N++G +IG+ G IK++Q +G R+
Sbjct: 112 ALLEGAPSMGMGGVV----SNNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVA 167
Query: 257 IPLHLPPGDTSTERTVQIDGTSEQIESA 284
LP STER V++ GT E I+ A
Sbjct: 168 QKEMLPQ---STERVVEVQGTPEGIQRA 192
Score = 103 (41.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 42/127 (33%), Positives = 61/127 (48%)
Query: 86 RVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSM-GTSK-KIEIPNIRVGVI 143
RV +GG + K ++ L APS + GG S GT K+ I + ++G I
Sbjct: 91 RVLTITGGCEGISKAYAVVARALLE-GAPS---MGMGGVVSNNGTHPIKLLISHNQMGTI 146
Query: 144 IGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAE 203
IG+ G IK++Q SG +++ E S R VE+ GTPE I +A I L +
Sbjct: 147 IGRQGLKIKHIQDVSG--VRMVAQKEMLPQSTERVVEVQGTPEGIQRAVWEICKCLIDDW 204
Query: 204 SGGSGIV 210
G+G V
Sbjct: 205 QRGTGTV 211
Score = 94 (38.1 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 225 MKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESA 284
+ IP + VG +IG+ G I ++ +GARI + P D + ER I G+++ E+A
Sbjct: 292 ISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA---PHDETGERMFTIMGSAKANETA 348
Query: 285 KQLVNEVISENRIRNPAM 302
L+ E + ++R M
Sbjct: 349 LFLLYENLEAEKMRRSQM 366
Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 3 DEPQYSSDGTPSKRKYED 20
DEP+ DG P+ + E+
Sbjct: 23 DEPRLGPDGEPAPKTDEE 40
>UNIPROTKB|E1BFI4 [details] [associations]
symbol:IGF2BP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0044430
"cytoskeletal part" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003730 "mRNA
3'-UTR binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048027 GO:GO:0003730 GeneTree:ENSGT00530000063171 CTD:10644
GO:GO:0044430 OMA:KQQEQKH EMBL:DAAA02001852 EMBL:DAAA02001853
EMBL:DAAA02001854 EMBL:DAAA02001855 EMBL:DAAA02001856
IPI:IPI00721408 RefSeq:NP_001179433.1 UniGene:Bt.33805
ProteinModelPortal:E1BFI4 Ensembl:ENSBTAT00000036032 GeneID:519028
KEGG:bta:519028 NextBio:20872792 Uniprot:E1BFI4
Length = 599
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 65/247 (26%), Positives = 114/247 (46%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
+I +P VG IIGK G TIK + Q+ +++ + R + + + V + TPE ++A
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSEA 254
Query: 192 EQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQAR 249
++I +++ + E+ + + ++ +KI N VG +IGK G +K ++
Sbjct: 255 CRMILEIM-QKEADETKL----------AEEIPLKILAHNGLVGRLIGKEGRNLKKIEHE 303
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSE-----QIESAKQL----VNEVISENRIRN- 299
TG +I + L + ERT+ + GT E +IE K+L N++++ N+ N
Sbjct: 304 TGTKITISSLQ-DLSIYNPERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANL 362
Query: 300 -PAM---AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQTPQYNMSQ-PP 353
P + A G G PP + G GAP P + + G + P + P
Sbjct: 363 IPGLNLSALGIFSTGLSVLPPPA-GPRGAPPAP-PYHPFATHSGYFSSLYPPHQFGPFPH 420
Query: 354 YGGYPSQ 360
+ YP Q
Sbjct: 421 HHSYPEQ 427
Score = 151 (58.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 52/175 (29%), Positives = 86/175 (49%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
IP VG IIGK G IK L +GA I++ D++ R V + G PE KA+
Sbjct: 434 IPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSE--RMVIITGPPEAQFKAQGR 491
Query: 195 INDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
I L E E+ + +L H +++P++ G VIGKGG+T+ +Q T A +
Sbjct: 492 IFGKLKE-ENFFNPKEEVKLEA-----H--IRVPSSTAGRVIGKGGKTVNELQNLTSAEV 543
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
++P P D + E V+I G ++A++ + E++ + + + G + Q
Sbjct: 544 -IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQKYPQGVASQ 596
>ZFIN|ZDB-GENE-090313-285 [details] [associations]
symbol:zmiz2 "zinc finger, MIZ-type containing 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR004181 Pfam:PF02891 PROSITE:PS51044
ZFIN:ZDB-GENE-090313-285 GO:GO:0008270 GeneTree:ENSGT00550000074410
EMBL:CT956056 EMBL:FP074878 IPI:IPI00928986
Ensembl:ENSDART00000110166 Uniprot:E7F4Q2
Length = 888
Score = 118 (46.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 59/203 (29%), Positives = 76/203 (37%)
Query: 414 SQPPASG--YNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQ---QGYNSAAGYGNVNNTS 468
S+PP+ G Y QQGQ Q + GY Q G P QQ + YNS G
Sbjct: 212 SRPPSMGPMYTQQGQRLPQ--HPGYPGSQQG----PPRHQQALKRPYNSEGFPGQQYGPG 265
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQP--SPNTASYPPQGATQPSYGVP 526
G P Y Q P P +S+ + Y T + P P+ A YP G PS
Sbjct: 266 MGGGGP-YPGQPMQYHGPGPQRSAPS---PSYPTHRMPLQQPSMAQYPA-GPGNPSQYYK 320
Query: 527 PTSQ-SGYG-----SQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAG-GYGQPG- 578
Q +G G S GY+ + P P P Y + PGS+ Y P
Sbjct: 321 QAEQFNGQGNNHSLSSAVTTGGYSSFNQPTVNGPGRAMPGY-PSSPLPGSSSMPYMSPNQ 379
Query: 579 -----YSHSQPPPSSYAQPDSGS 596
+ H P S QP +G+
Sbjct: 380 DVKSPFLHDVKPNISALQPPTGN 402
Score = 89 (36.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/95 (32%), Positives = 40/95 (42%)
Query: 276 GTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV 335
G+ + + + N S+ P GG S G+ P +S G M Q GY
Sbjct: 37 GSLSVVTTVWGVTNPSASQQVFGAPMGPGGNSAGGHMM-PGSSPGMNSPQFMSQQGY--- 92
Query: 336 QPGAYPGQT-PQYNMSQPPYGGYPSQPTPGGYPGN 369
P P +T Q M P GGYP+ P GGYP N
Sbjct: 93 -PE--PNKTYMQQGMYGRPSGGYPAGPGYGGYPNN 124
Score = 87 (35.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 45/154 (29%), Positives = 53/154 (34%)
Query: 452 QQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAP--PPVQSSAAMGQQGYGTGQQPSPN 509
Q+ N YG + S SY Q S P PP S + M G +P
Sbjct: 170 QEKQNQELSYGPMGGAS------SYNTQFLSHSGPRGPPGMSPSGM------VGSRPPSM 217
Query: 510 TASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPG 569
Y QG P + P SQ G PP+ QA K N + Q PG
Sbjct: 218 GPMYTQQGQRLPQHPGYPGSQQG-----PPRH-------QQALKRPYNSEGFPGQQYGPG 265
Query: 570 SAGG--Y-GQPGYSHSQPPPSSYAQPDSGSQRAP 600
GG Y GQP H P S P + R P
Sbjct: 266 MGGGGPYPGQPMQYHGPGPQRSAPSPSYPTHRMP 299
>UNIPROTKB|P57723 [details] [associations]
symbol:PCBP4 "Poly(rC)-binding protein 4" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003723 "RNA binding" evidence=NAS]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0003677 GO:GO:0003723
GO:GO:0030529 eggNOG:NOG315872 HOGENOM:HOG000182823
HOVERGEN:HBG053520 KO:K13162 CTD:57060 OMA:MSSSDAG
OrthoDB:EOG48D0VR EMBL:AF176330 EMBL:AK023993 EMBL:BC003008
EMBL:BC004153 EMBL:BC017098 IPI:IPI00027973 IPI:IPI00386254
RefSeq:NP_001167571.1 RefSeq:NP_065151.2 RefSeq:NP_127501.1
RefSeq:NP_127503.1 UniGene:Hs.20930 ProteinModelPortal:P57723
SMR:P57723 IntAct:P57723 MINT:MINT-2873350 STRING:P57723
PhosphoSite:P57723 DMDM:12230429 PRIDE:P57723
Ensembl:ENST00000322099 Ensembl:ENST00000355852
Ensembl:ENST00000428823 Ensembl:ENST00000461554
Ensembl:ENST00000484633 GeneID:57060 KEGG:hsa:57060 UCSC:uc003dce.2
UCSC:uc003dck.2 GeneCards:GC03M051991 HGNC:HGNC:8652 MIM:608503
neXtProt:NX_P57723 PharmGKB:PA32991 GenomeRNAi:57060 NextBio:62848
ArrayExpress:P57723 Bgee:P57723 CleanEx:HS_PCBP4
Genevestigator:P57723 GermOnline:ENSG00000090097 Uniprot:P57723
Length = 403
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 60/220 (27%), Positives = 99/220 (45%)
Query: 140 VGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLI---- 195
VG IIGK GET+K ++ QS A+I ++ + P R + G+ + A +I
Sbjct: 29 VGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKL 83
Query: 196 NDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQ 255
++ L A + G + +T + IP ++ G +IGK G IK ++ TGA++Q
Sbjct: 84 DEDLCAAPANGGNVSRPPVT-------LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 256 VIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIR------NPAMAGGY--- 306
V LP STER V + G + I + + VI E+ + +P+++ G
Sbjct: 137 VAGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLL 193
Query: 307 -SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTP 345
+ QG+ + TP + Q + P A P P
Sbjct: 194 SANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVP 233
Score = 105 (42.0 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 61 QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGG--FDSADKGFSSPPSDLKSIPAPSAIP 118
+ KR EQ +AR+ S + +R GS F + DL A P
Sbjct: 38 ETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDL------CAAP 91
Query: 119 VSYGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRS 178
+ G + ++ IP + G +IGK+G IK ++ +GA++QV D NS R+
Sbjct: 92 ANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP--NSTERA 149
Query: 179 VELMGTPEQIAKAEQLINDVLAEAESGGSGI 209
V + G P+ I + I V+ E+ G+ I
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESPPKGATI 180
Score = 86 (35.3 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 46/178 (25%), Positives = 73/178 (41%)
Query: 184 TPEQIAKAEQLINDVLAEAESGGSGIVARRLTG-QAGSDHFAMKIPNNKVGLVIGKGGET 242
TP ++ K +QL + + A +V G Q S F +PN+ +G VIG+ G
Sbjct: 209 TPAEVTKLQQLSSHAVPFATPS---VVPGLDPGTQTSSQEFL--VPNDLIGCVIGRQGSK 263
Query: 243 IKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRN--- 299
I ++ +GA I++ + + ER V I G+ I A+ L+ + + +
Sbjct: 264 ISEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGT 319
Query: 300 ----PA-MAGGYSQQ--GYQARPPTSWGTPGAPSMQ-----QPGYGYVQPGAYPGQTP 345
PA + +S PP GTP A S+ +P P A PG P
Sbjct: 320 PSSAPADLPAPFSPPLTALPTAPPGLLGTPYAISLSNFIGLKPMPFLALPPASPGPPP 377
>UNIPROTKB|F1PDI8 [details] [associations]
symbol:IGF2BP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GeneTree:ENSGT00530000063171 CTD:10644 OMA:KQQEQKH
EMBL:AAEX03017290 EMBL:AAEX03017291 EMBL:AAEX03017292
RefSeq:XP_535832.3 Ensembl:ENSCAFT00000021148 GeneID:478662
KEGG:cfa:478662 Uniprot:F1PDI8
Length = 531
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 64/247 (25%), Positives = 114/247 (46%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
+I +P VG IIGK G TIK + Q+ +++ + R + + + V + TPE ++A
Sbjct: 129 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSEA 186
Query: 192 EQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQAR 249
++I +++ + E+ + + ++ +KI N VG +IGK G +K ++
Sbjct: 187 CRMILEIM-QKEADETKL----------AEEIPLKILAHNGLVGRLIGKEGRNLKKIEHE 235
Query: 250 TGARIQVIPLHLPPGDTSTERTVQIDGTSE-----QIESAKQL----VNEVISENRIRN- 299
TG +I + L + ERT+ + GT E ++E K+L N++++ N+ N
Sbjct: 236 TGTKITISSLQ-DLSIYNPERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNQQANL 294
Query: 300 -PAM---AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYV-QPGAYPGQTPQYNMSQ-PP 353
P + A G G PP + G GAP P + + G + P + P
Sbjct: 295 IPGLNLSALGIFSTGLSVLPPPA-GPRGAPPAP-PYHPFATHSGYFSSLYPPHQFGPFPH 352
Query: 354 YGGYPSQ 360
+ YP Q
Sbjct: 353 HHSYPEQ 359
Score = 151 (58.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 52/175 (29%), Positives = 86/175 (49%)
Query: 135 IPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQL 194
IP VG IIGK G IK L +GA I++ D++ R V + G PE KA+
Sbjct: 366 IPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSE--RMVIITGPPEAQFKAQGR 423
Query: 195 INDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARI 254
I L E E+ + +L H +++P++ G VIGKGG+T+ +Q T A +
Sbjct: 424 IFGKLKE-ENFFNPKEEVKLEA-----H--IRVPSSTAGRVIGKGGKTVNELQNLTSAEV 475
Query: 255 QVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGGYSQQ 309
++P P D + E V+I G ++A++ + E++ + + + G + Q
Sbjct: 476 -IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQKYPQGVASQ 528
>UNIPROTKB|I3L9X2 [details] [associations]
symbol:IGF2BP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 CTD:10642 GeneTree:ENSGT00530000063171 OMA:EQETVHV
EMBL:FP312864 RefSeq:XP_003358128.1 Ensembl:ENSSSCT00000022825
GeneID:100620940 KEGG:ssc:100620940 Uniprot:I3L9X2
Length = 577
Score = 156 (60.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 55/195 (28%), Positives = 89/195 (45%)
Query: 104 PPSDLKSIPAPSAIP--VSYGGYQSMGTSKKIE--IPNIRVGVIIGKSGETIKYLQLQSG 159
P S P PS++ Y + + ++ IP VG IIGK G+ IK L +
Sbjct: 377 PASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFAS 436
Query: 160 AKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAG 219
A I++ D S R V + G PE KA+ I L E G + T
Sbjct: 437 ASIKIAPPETPD--SKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLET---- 490
Query: 220 SDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSE 279
H +++P + G VIGKGG+T+ +Q T A + V+P P D + + V+I G
Sbjct: 491 --H--IRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP-DENDQVIVKIIGHFY 544
Query: 280 QIESAKQLVNEVISE 294
+ A++ + +++++
Sbjct: 545 ASQMAQRKIRDILAQ 559
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 59/210 (28%), Positives = 95/210 (45%)
Query: 88 ENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKS 147
ENG G GFSS + P + P Q + ++ +P VG IIGK
Sbjct: 164 ENGRRG------GFSSRGQPRQGSPVAAGAPAKQ---QQVDIPLRLLVPTQYVGAIIGKE 214
Query: 148 GETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL-AEAESGG 206
G TI+ + Q+ +KI V R A + +++ + TPE + A ++I +++ EA+
Sbjct: 215 GATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSSACKMILEIMHKEAKD-- 270
Query: 207 SGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
T A D +KI NN VG +IGK G +K ++ T +I + L
Sbjct: 271 --------TKTA--DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQ-DLT 319
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVISE 294
+ ERT+ + G E A+Q + + + E
Sbjct: 320 LYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 44 (20.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 15 KRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
+ YE+ S + G + + P S ++VPPP
Sbjct: 348 REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPP 386
>UNIPROTKB|E1BKJ7 [details] [associations]
symbol:IGF2BP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010610 "regulation of mRNA stability involved in response to
stress" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005886 GO:GO:0005634 GO:GO:0017148 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0045182 GO:GO:0048027 GO:GO:0003730
GO:GO:0010494 GO:GO:0070937 GO:GO:0070934 CTD:10642
GeneTree:ENSGT00530000063171 OMA:EQETVHV GO:GO:0010610
EMBL:DAAA02049054 EMBL:DAAA02049055 IPI:IPI00699469
RefSeq:NP_001179383.1 UniGene:Bt.27949 Ensembl:ENSBTAT00000015586
GeneID:516853 KEGG:bta:516853 NextBio:20872317 Uniprot:E1BKJ7
Length = 577
Score = 156 (60.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 55/195 (28%), Positives = 89/195 (45%)
Query: 104 PPSDLKSIPAPSAIP--VSYGGYQSMGTSKKIE--IPNIRVGVIIGKSGETIKYLQLQSG 159
P S P PS++ Y + + ++ IP VG IIGK G+ IK L +
Sbjct: 377 PASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFAS 436
Query: 160 AKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAG 219
A I++ D S R V + G PE KA+ I L E G + T
Sbjct: 437 ASIKIAPPETPD--SKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLET---- 490
Query: 220 SDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSE 279
H +++P + G VIGKGG+T+ +Q T A + V+P P D + + V+I G
Sbjct: 491 --H--IRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP-DENDQVIVKIIGHFY 544
Query: 280 QIESAKQLVNEVISE 294
+ A++ + +++++
Sbjct: 545 ASQMAQRKIRDILAQ 559
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 58/210 (27%), Positives = 94/210 (44%)
Query: 88 ENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKS 147
ENG G GF S + P + P Q + ++ +P VG IIGK
Sbjct: 164 ENGRRG------GFGSRGQPRQGSPVAAGAPAKQ---QQVDIPLRLLVPTQYVGAIIGKE 214
Query: 148 GETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL-AEAESGG 206
G TI+ + Q+ +KI V R A + +++ + TPE + A ++I +++ EA+
Sbjct: 215 GATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSSACKMILEIMHKEAKD-- 270
Query: 207 SGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
T A D +KI NN VG +IGK G +K ++ T +I + L
Sbjct: 271 --------TKTA--DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQ-DLT 319
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVISE 294
+ ERT+ + G E A+Q + + + E
Sbjct: 320 LYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 44 (20.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 15 KRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
+ YE+ S + G + + P S ++VPPP
Sbjct: 348 REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPP 386
>UNIPROTKB|E2RTC5 [details] [associations]
symbol:IGF2BP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IEA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0010610 "regulation of mRNA stability involved in
response to stress" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005886 GO:GO:0005634 GO:GO:0017148 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0045182 GO:GO:0048027 GO:GO:0003730
GO:GO:0010494 GO:GO:0070937 GO:GO:0070934 CTD:10642
GeneTree:ENSGT00530000063171 OMA:EQETVHV GO:GO:0010610
EMBL:AAEX03006519 EMBL:AAEX03006520 RefSeq:XP_548184.2
ProteinModelPortal:E2RTC5 Ensembl:ENSCAFT00000026763 GeneID:491064
KEGG:cfa:491064 Uniprot:E2RTC5
Length = 577
Score = 156 (60.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 55/195 (28%), Positives = 89/195 (45%)
Query: 104 PPSDLKSIPAPSAIP--VSYGGYQSMGTSKKIE--IPNIRVGVIIGKSGETIKYLQLQSG 159
P S P PS++ Y + + ++ IP VG IIGK G+ IK L +
Sbjct: 377 PASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFAS 436
Query: 160 AKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAG 219
A I++ D S R V + G PE KA+ I L E G + T
Sbjct: 437 ASIKIAPPETPD--SKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLET---- 490
Query: 220 SDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSE 279
H +++P + G VIGKGG+T+ +Q T A + V+P P D + + V+I G
Sbjct: 491 --H--IRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP-DENDQVIVKIIGHFY 544
Query: 280 QIESAKQLVNEVISE 294
+ A++ + +++++
Sbjct: 545 ASQMAQRKIRDILAQ 559
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 58/210 (27%), Positives = 94/210 (44%)
Query: 88 ENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKIEIPNIRVGVIIGKS 147
ENG G GF S + P + P Q + ++ +P VG IIGK
Sbjct: 164 ENGRRG------GFGSRGQPRQGSPVAAGAPAKQ---QQVDIPLRLLVPTQYVGAIIGKE 214
Query: 148 GETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAEQLINDVL-AEAESGG 206
G TI+ + Q+ +KI V R A + +++ + TPE + A ++I +++ EA+
Sbjct: 215 GATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSSACKMILEIMHKEAKD-- 270
Query: 207 SGIVARRLTGQAGSDHFAMKI--PNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPG 264
T A D +KI NN VG +IGK G +K ++ T +I + L
Sbjct: 271 --------TKTA--DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQ-DLT 319
Query: 265 DTSTERTVQIDGTSEQIESAKQLVNEVISE 294
+ ERT+ + G E A+Q + + + E
Sbjct: 320 LYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 44 (20.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 15 KRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPP 53
+ YE+ S + G + + P S ++VPPP
Sbjct: 348 REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPP 386
>FB|FBgn0262126 [details] [associations]
symbol:gho "ghost" species:7227 "Drosophila melanogaster"
[GO:0004252 "serine-type endopeptidase activity" evidence=ISS]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IDA] [GO:0035158 "regulation of tube diameter, open
tracheal system" evidence=IMP] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0070971 "endoplasmic reticulum exit site"
evidence=IDA] [GO:0003331 "positive regulation of extracellular
matrix constituent secretion" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0048081
"positive regulation of cuticle pigmentation" evidence=IMP]
[GO:0030011 "maintenance of cell polarity" evidence=IMP]
[GO:0007030 "Golgi organization" evidence=IMP] [GO:0016203 "muscle
attachment" evidence=IMP] [GO:0035149 "lumen formation, open
tracheal system" evidence=IMP] [GO:0034394 "protein localization to
cell surface" evidence=IMP] [GO:0040003 "chitin-based cuticle
development" evidence=IMP] [GO:0022409 "positive regulation of
cell-cell adhesion" evidence=IMP] [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0000902 "cell morphogenesis" evidence=IMP]
InterPro:IPR006895 InterPro:IPR006896 InterPro:IPR006900
Pfam:PF04810 Pfam:PF04811 Pfam:PF04815 GO:GO:0006886 EMBL:AE014134
GO:GO:0008360 GO:GO:0005811 GO:GO:0008270 GO:GO:0009306
GO:GO:0016787 GO:GO:0016203 GO:GO:0000902 InterPro:IPR007123
Pfam:PF00626 GO:GO:0006888 GO:GO:0040003 GO:GO:0034394
GO:GO:0003331 GO:GO:0071711 GO:GO:0007030 GO:GO:0007029
GO:GO:0030011 GO:GO:0035158 GO:GO:0022409 GO:GO:0035149
GO:GO:0030127 SUPFAM:SSF82919 GO:GO:0070971 InterPro:IPR012990
Pfam:PF08033 SUPFAM:SSF81811 eggNOG:COG5028 KO:K14007
GeneTree:ENSGT00590000082962 HSSP:P40482 OMA:QDQGNCN GO:GO:0048081
EMBL:AY052042 RefSeq:NP_608664.2 UniGene:Dm.269 SMR:Q9VQ94
IntAct:Q9VQ94 MINT:MINT-283494 STRING:Q9VQ94
EnsemblMetazoa:FBtr0077810 EnsemblMetazoa:FBtr0329964 GeneID:33409
KEGG:dme:Dmel_CG10882 UCSC:CG10882-RA CTD:33409 FlyBase:FBgn0262126
InParanoid:Q9VQ94 OrthoDB:EOG4CVDNW GenomeRNAi:33409 NextBio:783418
Uniprot:Q9VQ94
Length = 1193
Score = 123 (48.4 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 53/168 (31%), Positives = 61/168 (36%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQ---AAPYDQQQGYNSAAG--YGNVNN 466
+Y+QP QQG Q G Q G+ P Q G G YG
Sbjct: 255 TYTQPGLPPQQQQGIPPLQQP--GIPQQQPGFPPQQPGLPPLSQPGLPPQPGAPYGAPQQ 312
Query: 467 TSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTA-SYPPQGATQPSYGV 525
G P A G APPP+ A +G Q P YPPQ QP G
Sbjct: 313 GGYSGGFPGQ-APGGFPGAPPPLPGQQAAAPPQFGAPQPGYPGQQPGYPPQPGQQPMPGY 371
Query: 526 PPT-SQSGYGSQVPPQSGYAGY----GMPQAQKPLANPPAYGQTQQSP 568
PP Q G PPQ G AG+ G P +P P A QQ+P
Sbjct: 372 PPQPGQQLGGPGYPPQPG-AGFPGQPGRPGFNQP-PMPGAGNMYQQAP 417
Score = 123 (48.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 64/207 (30%), Positives = 77/207 (37%)
Query: 412 SYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEG 471
S Q ASG NQ A + G H P +AA G G+ + G
Sbjct: 156 STPQSVASGINQMSLNSATLA-GLPHMPPP---KAATPGAAPGQPPIPAAGSTSQPPLPG 211
Query: 472 HTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYP----PQGATQPSYGVPP 527
P G S Q P + + G GQ P A+ P P Q G+PP
Sbjct: 212 QPPLPGQPPFSGQIPTSQPAPSPYGVPSSRPGQPQLPPGATPPTYTQPGLPPQQQQGIPP 271
Query: 528 TSQSGYGSQ---VPPQSGYAGYGMPQAQKPLANP-PA--YGQTQQSPGSAGGY-GQ-PGY 579
Q G Q PPQ G+P +P P P YG QQ G +GG+ GQ PG
Sbjct: 272 LQQPGIPQQQPGFPPQQP----GLPPLSQPGLPPQPGAPYGAPQQG-GYSGGFPGQAPGG 326
Query: 580 SHSQPPPSSYAQPDSGSQRAPPSNYGA 606
PPP P G Q A P +GA
Sbjct: 327 FPGAPPPL----P--GQQAAAPPQFGA 347
Score = 118 (46.6 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 64/203 (31%), Positives = 72/203 (35%)
Query: 414 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHT 473
SQP S Y Q P + P QQQG G Q G
Sbjct: 228 SQPAPSPYGVPSSRPGQPQLPPGATPPTYTQPGLPPQQQQGIPPLQQPGIPQQ--QPGFP 285
Query: 474 PSYGAQGDSTQAPPPVQSSAAMG---QQGYG---TGQQPSPNTASYPP----QGATQPSY 523
P +Q P Q A G Q GY GQ P + PP Q A P +
Sbjct: 286 PQQPGLPPLSQPGLPPQPGAPYGAPQQGGYSGGFPGQAPGGFPGAPPPLPGQQAAAPPQF 345
Query: 524 GVP----PTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGY 579
G P P Q GY Q P Q GY PQ + L P G Q PG AG GQPG
Sbjct: 346 GAPQPGYPGQQPGYPPQ-PGQQPMPGYP-PQPGQQLGGP---GYPPQ-PG-AGFPGQPGR 398
Query: 580 SHSQPPPSSYAQPDSGS--QRAP 600
PP P +G+ Q+AP
Sbjct: 399 PGFNQPP----MPGAGNMYQQAP 417
Score = 98 (39.6 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 41/132 (31%), Positives = 49/132 (37%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
G Y P GY+ G A + G P G AAP Q G GY Q
Sbjct: 304 GAPYGAPQQGGYSGGFPGQAPGGFPGAPPPLPGQQAAAP--PQFGAPQP-GYPG----QQ 356
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
G+ P G Q P P GQQ G G P P A +P Q +P + PP
Sbjct: 357 PGYPPQPGQQPMPGYPPQP-------GQQLGGPGYPPQPG-AGFPGQPG-RPGFNQPPMP 407
Query: 530 QSGYGSQVPPQS 541
+G Q PQ+
Sbjct: 408 GAGNMYQQAPQA 419
Score = 90 (36.7 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 32/83 (38%), Positives = 37/83 (44%)
Query: 300 PAMAGGYSQQGYQARPPTSW--GTP-----GAPSMQQPGYGYVQPGAYPGQTPQYN-MSQ 351
P+ G Q A PPT G P G P +QQPG QPG +P Q P +SQ
Sbjct: 238 PSSRPGQPQLPPGATPPTYTQPGLPPQQQQGIPPLQQPGIPQQQPG-FPPQQPGLPPLSQ 296
Query: 352 P---PYGGYP-SQPTPGGYPGNW 370
P P G P P GGY G +
Sbjct: 297 PGLPPQPGAPYGAPQQGGYSGGF 319
Score = 78 (32.5 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 24/61 (39%), Positives = 25/61 (40%)
Query: 310 GYQARPPTSWGTPGAPSMQQP--GYGYVQPGAYPGQTPQYNMSQPPYGGY-P-SQPTPGG 365
G PP TPGA Q P G PGQ P QPP+ G P SQP P
Sbjct: 177 GLPHMPPPKAATPGAAPGQPPIPAAGSTSQPPLPGQPPL--PGQPPFSGQIPTSQPAPSP 234
Query: 366 Y 366
Y
Sbjct: 235 Y 235
Score = 72 (30.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 17/47 (36%), Positives = 20/47 (42%)
Query: 316 PTSWGTPGAPSMQQPGYGYVQP--GAYPGQTPQYNMSQPPYGGYPSQ 360
P +G P QQP +G P G +P Q Q QPP P Q
Sbjct: 3 PNMYGPPPTQFQQQPQFGAPPPNSGGWPPQQQQLPQQQPPQQQLPPQ 49
Score = 69 (29.3 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 21/48 (43%), Positives = 22/48 (45%)
Query: 323 GAPSMQQPGYGYVQPGAYPGQTP---QYNMSQPPYGGYPSQPTPGGYP 367
G P M P PGA PGQ P + SQPP G P P PG P
Sbjct: 177 GLPHMPPPKAA--TPGAAPGQPPIPAAGSTSQPPLPGQP--PLPGQPP 220
Score = 59 (25.8 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 25/80 (31%), Positives = 31/80 (38%)
Query: 305 GYSQ-QGYQARPPTSWGTP--GAPSMQQPGYGYVQPGAYPGQTPQ--------YNMSQPP 353
G++Q A PPT+ GAP Q G YV P TPQ +++
Sbjct: 116 GFNQFNSNAAPPPTNNNNAAFGAPPPTQAG-SYVNGALPPSSTPQSVASGINQMSLNSAT 174
Query: 354 YGGYPSQP-----TPGGYPG 368
G P P TPG PG
Sbjct: 175 LAGLPHMPPPKAATPGAAPG 194
Score = 53 (23.7 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 25 PSAAARRPTGFSA--PDPAVAPTSYNSV----PPP 53
P+AAA PTGF+ + A PT+ N+ PPP
Sbjct: 107 PAAAAPPPTGFNQFNSNAAPPPTNNNNAAFGAPPP 141
Score = 52 (23.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 15/52 (28%), Positives = 20/52 (38%)
Query: 314 RPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQPTPGG 365
+PP G P A + G+ A P P N + +G P PT G
Sbjct: 99 KPPLPQGAPAAAAPPPTGFNQFNSNAAP---PPTNNNNAAFGAPP--PTQAG 145
Score = 51 (23.0 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 18/52 (34%), Positives = 22/52 (42%)
Query: 300 PAMAGGY---SQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYN 348
P +GG+ QQ Q +PP P QQP YG P + Q P N
Sbjct: 23 PPNSGGWPPQQQQLPQQQPPQQQ-LPPQQQQQQPQYGAPPPTSAASQ-PYLN 72
Score = 48 (22.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 28/128 (21%), Positives = 41/128 (32%)
Query: 17 KYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDFQAAKRRAEQIAARLC- 75
++ PP F AP P A + N PP+ Q + + +A L
Sbjct: 119 QFNSNAAPPPTNNNN-AAFGAPPPTQAGSYVNGALPPSSTPQSVASGINQMSLNSATLAG 177
Query: 76 --NSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVSYGGYQSMGTSKKI 133
+ +A P G +A G +S P P P P S S
Sbjct: 178 LPHMPPPKAATPGAAPGQPPIPAA--GSTSQPPLPGQPPLPGQPPFSGQIPTSQPAPSPY 235
Query: 134 EIPNIRVG 141
+P+ R G
Sbjct: 236 GVPSSRPG 243
>TAIR|locus:2150956 [details] [associations]
symbol:AT5G15270 "AT5G15270" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014
PROSITE:PS50084 SMART:SM00322 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003723 eggNOG:NOG315872 KO:K13162
EMBL:AK228673 EMBL:AK229313 IPI:IPI00527841 RefSeq:NP_197031.3
RefSeq:NP_851040.1 UniGene:At.31826 ProteinModelPortal:Q0WNX3
SMR:Q0WNX3 PaxDb:Q0WNX3 PRIDE:Q0WNX3 EnsemblPlants:AT5G15270.1
EnsemblPlants:AT5G15270.2 GeneID:831379 KEGG:ath:AT5G15270
TAIR:At5g15270 HOGENOM:HOG000240086 InParanoid:Q0WNX3 OMA:IYSPSDE
PhylomeDB:Q0WNX3 ProtClustDB:CLSN2679973 Genevestigator:Q0WNX3
Uniprot:Q0WNX3
Length = 548
Score = 141 (54.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 41/183 (22%), Positives = 88/183 (48%)
Query: 136 PNIRVGVIIGKSGETIKYLQLQSGAKIQVTR------DTEADLNSPTRSVELMGTPEQIA 189
P ++G +IG+ G+ +K L+ + +KI++ + + SP+ G E++
Sbjct: 57 PVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVL 116
Query: 190 KAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMK--IPNNKVGLVIGKGGETIKNMQ 247
Q D L AR G K +P++++G ++G+GG+ ++N++
Sbjct: 117 SPAQ---DALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIR 173
Query: 248 ARTGARIQVIP-LHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNPAM---A 303
+ TGA+I+++ ++P +++ +QI G ++ A + + EN R+ + +
Sbjct: 174 SETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSS 233
Query: 304 GGY 306
GGY
Sbjct: 234 GGY 236
Score = 59 (25.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 452 QQGYNSAAGYGNVNNTSQEGHTPSYGAQ-GDSTQAPPPVQSSAAMGQ 497
++G GYG+ + S EG++P YGA G S+ P V A G+
Sbjct: 484 ERGNPYPGGYGS-SGVSAEGYSP-YGAPVGGSSSTPYGVYGGYASGR 528
Score = 54 (24.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 14/34 (41%), Positives = 14/34 (41%)
Query: 572 GGYGQPGYSHSQPPPSSYAQPDSGSQRAPPSNYG 605
GGYG G S P Y P GS P YG
Sbjct: 491 GGYGSSGVSAEGYSP--YGAPVGGSSSTPYGVYG 522
Score = 50 (22.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/42 (30%), Positives = 15/42 (35%)
Query: 532 GYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGG 573
GYGS GY+ YG P YG S+ G
Sbjct: 492 GYGSSGVSAEGYSPYGAPVGGSSSTPYGVYGGYASGRSSSSG 533
Score = 45 (20.9 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 423 QQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDS 482
++G Y YG GY +PY G +S+ YG V G + S G S
Sbjct: 484 ERGNPYP-GGYGSSGVSAEGY---SPYGAPVGGSSSTPYG-VYGGYASGRSSSSGLSSHS 538
Query: 483 T 483
+
Sbjct: 539 S 539
Score = 39 (18.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/38 (31%), Positives = 13/38 (34%)
Query: 558 PPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSG 595
P YG + S YG P S P Y SG
Sbjct: 490 PGGYGSSGVSAEGYSPYGAPVGGSSSTPYGVYGGYASG 527
>WB|WBGene00002717 [details] [associations]
symbol:let-526 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0003677 GO:GO:0010171 GO:GO:0040011
GO:GO:0005622 GO:GO:0040035 eggNOG:NOG12793 GO:GO:0007413
GO:GO:0040027 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 GO:GO:0001703
EMBL:FO080267 RefSeq:NP_491562.3 PaxDb:P91019 PRIDE:P91019
EnsemblMetazoa:C01G8.9a GeneID:3565337 KEGG:cel:CELE_C01G8.9
CTD:3565337 WormBase:C01G8.9a HOGENOM:HOG000019682
InParanoid:P91019 OMA:CESETEP NextBio:956091 ArrayExpress:P91019
Uniprot:P91019
Length = 1687
Score = 109 (43.4 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 53/208 (25%), Positives = 78/208 (37%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYG-QAAPYDQQQGYNSAAGYGNVNNTSQ 469
++ Q A Q Q + + APQ+ QAAP G N+ + +N
Sbjct: 524 HAQQQAAAQAQAAQAQQASTPAPSTTPAPQAASSSQAAP---TSGANTQPATPSASN--- 577
Query: 470 EGHTPSYGAQGDSTQAPPP-VQSSAAMGQQGYGTGQQPS--PNTASYPPQGA-------T 519
+ TP+ + + P V + G + G PS P++++ P A T
Sbjct: 578 QPPTPASASASTTLHVEPASVAGGSQAGSRAPSAGPGPSATPDSSTIPSASAAADAQTTT 637
Query: 520 QPSYGVP--PTSQSGYGSQVPPQSGYAGYGM--PQAQKPLANPPAYGQTQQSPGSAGGYG 575
P PTS + + P S + PQ Q+P PP QQ PG GY
Sbjct: 638 SSETSTPGEPTSSTPSDTPAPSTSVPPPTSVQPPQPQQPPQGPPGPPGPQQHPGPYPGY- 696
Query: 576 QPGYSH--SQPPPSSYAQPDSGSQRAPP 601
PGY + PP+ +A P PP
Sbjct: 697 -PGYGPPGAMRPPAGFAPPPGAPYGYPP 723
Score = 107 (42.7 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 45/141 (31%), Positives = 55/141 (39%)
Query: 482 STQAPPPVQS-SAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGV--PPTSQSGYGSQVP 538
S Q P P Q G G P P Y P GA +P G PP + GY P
Sbjct: 667 SVQPPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAP 726
Query: 539 PQSGY--AGYGMPQAQKPLA------NPPAYGQTQQSPGSAGG----YGQPGYSHSQPPP 586
P +G+ + PQ + LA + Q QQ G+ GG Y PG PP
Sbjct: 727 PPAGFHPSHPQHPQHAQYLAWQQQRYHQQQQHQQQQQQGAPGGPRPPYPYPGGPVPPGPP 786
Query: 587 SSYAQPDSGSQRAPPSNYGAA 607
+ P +Q AP S GAA
Sbjct: 787 QNRMPPPPPAQGAP-SPSGAA 806
Score = 103 (41.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 24/66 (36%), Positives = 28/66 (42%)
Query: 305 GYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYP--GQTPQYNMSQP-PYGGYPSQP 361
G + PP W PGA PGY P YP G P+++ P P GYP
Sbjct: 44 GQHHPQHPGMPPMEWRPPGAEYQMPPGY----PAGYPPYGMPPRHHPGYPHPAYGYPPPG 99
Query: 362 TPGGYP 367
P GYP
Sbjct: 100 APYGYP 105
Score = 97 (39.2 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 55/207 (26%), Positives = 80/207 (38%)
Query: 411 YSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE 470
+S Q P G G AP + Q Q+Q Y ++ Q+
Sbjct: 469 FSPGQYPGHQRPPGGPGGPPPGPQAMRAPMPQHMQEMDEHQRQWYAHQQAAAAHHHAQQQ 528
Query: 471 GHTPSYGAQGD--STQAPP--PVQSSAAMGQQG--YGTGQQPS-PNTASYPPQGAT---Q 520
+ AQ ST AP P +A+ Q G QP+ P+ ++ PP A+
Sbjct: 529 AAAQAQAAQAQQASTPAPSTTPAPQAASSSQAAPTSGANTQPATPSASNQPPTPASASAS 588
Query: 521 PSYGVPPTSQSGYGSQVPPQSGYAGYG---MPQAQK-PLANPPAYGQTQQSPGSAGGYGQ 576
+ V P S +G GSQ ++ AG G P + P A+ A QT S ++ G+
Sbjct: 589 TTLHVEPASVAG-GSQAGSRAPSAGPGPSATPDSSTIPSASAAADAQTTTSSETSTP-GE 646
Query: 577 PGYS--HSQPPPSSYAQPDSGSQRAPP 601
P S P PS+ P + Q PP
Sbjct: 647 PTSSTPSDTPAPSTSVPPPTSVQ--PP 671
Score = 93 (37.8 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 49/161 (30%), Positives = 56/161 (34%)
Query: 439 PQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQE-GHTPSYGAQ-GDSTQAPPPVQSSAAMG 496
PQ G P Y GYG G P GA G APPP +
Sbjct: 677 PQGPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAPPPAGFHPSHP 736
Query: 497 QQG----YGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQ 552
Q Y QQ + Q Q + G P G VPP G PQ +
Sbjct: 737 QHPQHAQYLAWQQQRYHQQQQHQQQQQQGAPGGPRPPYPYPGGPVPP-------GPPQNR 789
Query: 553 KPLANPPAYGQTQQSPGSAGGYG-QPGYSHSQPPPSSYAQP 592
P PPA G S G+AG G QP Y + PPS + P
Sbjct: 790 MP-PPPPAQGAPSPS-GAAGSNGKQPRYG-TPAPPSRASAP 827
Score = 90 (36.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 44/149 (29%), Positives = 54/149 (36%)
Query: 467 TSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP 526
TS + P QG P G GYG P PP GA P YG P
Sbjct: 666 TSVQPPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGA--P-YGYP 722
Query: 527 PTSQ--SGYGSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGG----YGQPGYS 580
P + +G+ P +A Y Q Q+ + Q QQ G+ GG Y PG
Sbjct: 723 PGAPPPAGFHPSHPQHPQHAQYLAWQQQR--YHQQQQHQQQQQQGAPGGPRPPYPYPGGP 780
Query: 581 HSQPPPSSYAQPDSGSQRAP-PS-----N 603
PP + P +Q AP PS N
Sbjct: 781 VPPGPPQNRMPPPPPAQGAPSPSGAAGSN 809
Score = 88 (36.0 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 56/196 (28%), Positives = 67/196 (34%)
Query: 434 GGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSA 493
GG A + A DQ+ + + G G G P GA G PP
Sbjct: 379 GGNAAAAAAVAAAQQGDQKSQHGAPGGSG-APPPGPPGAYPGNGAPGGPPGGPPQFPGHP 437
Query: 494 AMGQQGYGTGQQ-----PSPNTASYPPQGATQPSYGVPPTSQ---SGYGSQVP-PQSGYA 544
M Y QQ P P YPPQ S G P Q G G P PQ+ A
Sbjct: 438 GM-DPNYHYYQQHGMMPPHPGHPGYPPQHMNAFSPGQYPGHQRPPGGPGGPPPGPQAMRA 496
Query: 545 GYGMPQAQKPL--------ANPPAYGQTQQSPGSAGGYGQPGYSH--SQPPPSSYAQPD- 593
MPQ + + A+ A + A Q + S P PS+ P
Sbjct: 497 P--MPQHMQEMDEHQRQWYAHQQAAAAHHHAQQQAAAQAQAAQAQQASTPAPSTTPAPQA 554
Query: 594 -SGSQRAPPSNYGAAT 608
S SQ AP S GA T
Sbjct: 555 ASSSQAAPTS--GANT 568
Score = 85 (35.0 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 35/126 (27%), Positives = 44/126 (34%)
Query: 469 QEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGY--GTGQQPSPNTASYPPQGATQPSYGVP 526
Q P+ G + A Q Q G G+G P +YP GA G P
Sbjct: 372 QRKREPA-GGNAAAAAAVAAAQQGDQKSQHGAPGGSGAPPPGPPGAYPGNGAPGGPPGGP 430
Query: 527 PTSQSGYGSQVPPQSGYAGYGM--PQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQP 584
P G+ P Y +GM P P PP + SPG G+ +P P
Sbjct: 431 PQFP-GHPGMDPNYHYYQQHGMMPPHPGHP-GYPPQH-MNAFSPGQYPGHQRPPGGPGGP 487
Query: 585 PPSSYA 590
PP A
Sbjct: 488 PPGPQA 493
Score = 84 (34.6 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
Identities = 28/78 (35%), Positives = 31/78 (39%)
Query: 300 PAMAGGYSQQGYQARPPTSWGT-PGAPSMQQPGYGYVQ--------PGAYPGQTPQYNMS 350
P G Y G PP PG P M P Y Y Q PG +PG PQ+ +
Sbjct: 411 PGPPGAYPGNGAPGGPPGGPPQFPGHPGMD-PNYHYYQQHGMMPPHPG-HPGYPPQHMNA 468
Query: 351 QPPYGGYPSQPTPGGYPG 368
P G YP P G PG
Sbjct: 469 FSP-GQYPGHQRPPGGPG 485
Score = 83 (34.3 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 36/124 (29%), Positives = 43/124 (34%)
Query: 423 QQGQ-GYAQDSY---GGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYG- 477
QQG G + Y GG P + P QG S +G N G P YG
Sbjct: 763 QQGAPGGPRPPYPYPGGPVPPGPPQNRMPPPPPAQGAPSPSGAAGSN-----GKQPRYGT 817
Query: 478 -AQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQ 536
A AP P S+ M T QP+P T SY P P+S +
Sbjct: 818 PAPPSRASAPTPQPLSSTMPVVAPSTSTQPTPTTGSYLANTLATPGPAHAPSSSMSHAHH 877
Query: 537 VPPQ 540
V Q
Sbjct: 878 VISQ 881
Score = 82 (33.9 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 26/66 (39%), Positives = 28/66 (42%)
Query: 310 GYQARPPTSWGTPGA--PSMQQPGYGYVQPGAYPGQTPQYNMSQPPY---GGYPSQPTPG 364
GY A P +G P P P YGY PGA G PQ M +PP G P PG
Sbjct: 70 GYPAGYPP-YGMPPRHHPGYPHPAYGYPPPGAPYGYPPQ--MMRPPMMAPGDMVRMP-PG 125
Query: 365 GYPGNW 370
P W
Sbjct: 126 PTPTEW 131
Score = 80 (33.2 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 315 PPTSWGTPGAPSMQQPGYGYVQ-PGAYPGQTPQYNMSQ-----PPYGGYPSQP------- 361
PP ++ GAP PG G Q PG +PG P Y+ Q PP+ G+P P
Sbjct: 413 PPGAYPGNGAPG-GPPG-GPPQFPG-HPGMDPNYHYYQQHGMMPPHPGHPGYPPQHMNAF 469
Query: 362 TPGGYPGN 369
+PG YPG+
Sbjct: 470 SPGQYPGH 477
Score = 78 (32.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 45/183 (24%), Positives = 61/183 (33%)
Query: 416 PPASGYNQQGQG-YAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTP 474
P GY Q ++ Y G+ P G G P Q ++ ++ +
Sbjct: 456 PGHPGYPPQHMNAFSPGQYPGHQRPPGGPGGPPPGPQAMRAPMPQHMQEMDEHQRQWYAH 515
Query: 475 SYGAQGDS-TQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGY 533
A Q Q+ AA QQ P+P+T PQ A+ S PTS
Sbjct: 516 QQAAAAHHHAQQQAAAQAQAAQAQQA----STPAPSTTP-APQAAS--SSQAAPTS---- 564
Query: 534 GSQVPPQSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPD 593
G+ P + A P P A+ A P S G Q G P A PD
Sbjct: 565 GANTQPATPSASNQPPT---P-ASASASTTLHVEPASVAGGSQAGSRAPSAGPGPSATPD 620
Query: 594 SGS 596
S +
Sbjct: 621 SST 623
Score = 76 (31.8 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 41/164 (25%), Positives = 58/164 (35%)
Query: 410 GYSYSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
GY PP +G++ + Q HA + Q Y QQQ + G +
Sbjct: 720 GYPPGAPPPAGFHPSHPQHPQ------HAQYLAWQQQR-YHQQQQHQQQQQQG-----AP 767
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVP-PT 528
G P Y G PP Q+ G PSP+ A+ QP YG P P
Sbjct: 768 GGPRPPYPYPGGPVPPGPP-QNRMPPPPPAQGA---PSPSGAA--GSNGKQPRYGTPAPP 821
Query: 529 SQSGYGSQVPPQSGYAGYGMPQAQKPLANPPAY-GQTQQSPGSA 571
S++ + P S + +P +Y T +PG A
Sbjct: 822 SRASAPTPQPLSSTMPVVAPSTSTQPTPTTGSYLANTLATPGPA 865
Score = 47 (21.6 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 12 TPSKRKYEDQTTPPSAAARRPTGFSAPDP-AVAPTSYNSVPPP 53
TP +++ + PP P P +V P S+ PPP
Sbjct: 3 TPQQQQQQPNLPPPQQPYEHPAQQHPPQHHSVPPNSF--APPP 43
Score = 45 (20.9 bits), Expect = 4.6e-05, Sum P(4) = 4.6e-05
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 24 PPSAAARRPTGFSA--PDPAVAPTSYNSVPPPA 54
PP A + P G+ A P + P + P PA
Sbjct: 60 PPGAEYQMPPGYPAGYPPYGMPPRHHPGYPHPA 92
Score = 42 (19.8 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 4 EPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPD-PAVA 43
+PQ P + Q TP S+AA +APD P V+
Sbjct: 200 QPQQIMSPMPPQAPPSQQATPSSSAA----SVAAPDTPKVS 236
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 102 SSPPSDLKSIPAPSAIPVS 120
++P S + IP+PSA ++
Sbjct: 155 ATPSSSSQPIPSPSASSIA 173
>DICTYBASE|DDB_G0291059 [details] [associations]
symbol:DDB_G0291059 "K homology (KH), type 1 domain
containing-protein" species:44689 "Dictyostelium discoideum"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002110 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF13014 PROSITE:PS50084 PROSITE:PS50088
SMART:SM00248 SMART:SM00322 dictyBase:DDB_G0291059
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003723 EMBL:AAFI02000174 eggNOG:NOG313207
RefSeq:XP_635430.1 ProteinModelPortal:Q54FA7
EnsemblProtists:DDB0233646 GeneID:8627931 KEGG:ddi:DDB_G0291059
InParanoid:Q54FA7 OMA:MKYINEI Uniprot:Q54FA7
Length = 384
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/173 (26%), Positives = 86/173 (49%)
Query: 133 IEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKAE 192
+ IP + G IIG+ G+ +K L+ + +IQ+ D + + G + + KA
Sbjct: 190 LPIPKVHHGKIIGRGGKNLKELRELTNTQIQLPESNVTD-----NKITIKGRKDDVEKAR 244
Query: 193 QLINDVLAEAESGGSGIVA----RRLTGQAGSDHFAM-KIPNNKVGLVIGKGGETIKNMQ 247
Q+I D++ ++ I A R+ +A + + I K L+IG G+ IK ++
Sbjct: 245 QMILDIVNPPKTPEE-IEAEEKKRKEEEEADIEILNLTSIAKEKHSLIIGSQGKNIKYLR 303
Query: 248 ARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENR-IRN 299
+ +I + PP ++S E + I G SE I++A + +NE++ +N I+N
Sbjct: 304 SHFNVKITI-----PPTNSS-ENNISIQGKSEDIDNAMKYINEILKKNNEIKN 350
>UNIPROTKB|G8JLA5 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:7886 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 ProteinModelPortal:G8JLA5 SMR:G8JLA5
Ensembl:ENST00000347476 Bgee:G8JLA5 Uniprot:G8JLA5
Length = 109
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
KI +PN G+IIGK G T+K + QSGA +Q+++ + +N R V + G PEQ KA
Sbjct: 29 KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKA 87
Query: 192 EQLINDVLAEAESGGS 207
+LI + E GS
Sbjct: 88 VELIIQKIQEDPQSGS 103
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 227 IPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQ 286
+PN+ GL+IGKGG T+K + ++GA +Q+ P G ER V + G EQ A +
Sbjct: 32 VPNSTAGLIIGKGGATVKAVMEQSGAWVQLS--QKPDGINLQERVVTVSGEPEQNRKAVE 89
Query: 287 LVNEVISEN 295
L+ + I E+
Sbjct: 90 LIIQKIQED 98
>UNIPROTKB|F8VRG9 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 EMBL:AC068889
EMBL:AC023509 HGNC:HGNC:8648 ChiTaRS:PCBP2 IPI:IPI01022480
ProteinModelPortal:F8VRG9 SMR:F8VRG9 PRIDE:F8VRG9
Ensembl:ENST00000552083 ArrayExpress:F8VRG9 Bgee:F8VRG9
Uniprot:F8VRG9
Length = 323
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 129 TSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQI 188
TS ++ IPN +G IIG+ G I ++ SGA+I++ E S R V + G+ I
Sbjct: 246 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG---STDRQVTITGSAASI 302
Query: 189 AKAEQLINDVLAEAESGGSG 208
+ A+ LIN V +E+GG G
Sbjct: 303 SLAQYLIN-VRLSSETGGMG 321
Score = 102 (41.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 214 LTGQAGSDHFAMKIPNNKVGLVIGKGGETIKNMQARTGARIQVIPLHLPPGDTSTERTVQ 273
L A + + IPN+ +G +IG+ G I ++ +GA+I++ P + ST+R V
Sbjct: 239 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT 294
Query: 274 IDGTSEQIESAKQLVNEVIS 293
I G++ I A+ L+N +S
Sbjct: 295 ITGSAASISLAQYLINVRLS 314
Score = 93 (37.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 132 KIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVELMGTPEQIAKA 191
++ +P + G +IGK G IK ++ +GA++QV D NS R++ + G P+ I +
Sbjct: 62 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIEC 119
Query: 192 EQLINDVLAEAESGGSGIVAR 212
+ I V+ E+ G I R
Sbjct: 120 VKQICVVMLESPPKGVTIPYR 140
>UNIPROTKB|F1MMA0 [details] [associations]
symbol:ILF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 GeneTree:ENSGT00550000074528 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 OMA:GRNADHS EMBL:DAAA02019470
IPI:IPI01002098 Ensembl:ENSBTAT00000018818 ArrayExpress:F1MMA0
Uniprot:F1MMA0
Length = 894
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 59/187 (31%), Positives = 79/187 (42%)
Query: 420 GYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQ 479
GY G GY YGG A +GY Q Y +A G G G+ Y Q
Sbjct: 663 GYMNAGAGYGSYGYGGNSAT-AGYSQF--YSNGGHSGNAGGGGGGGGGGSSGYGSYY--Q 717
Query: 480 GDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPP 539
GD+ +P P + + +Q +G Q+PS + P QG Q SY SQS Y + PP
Sbjct: 718 GDNYNSPVPPKHAGK--KQPHGGQQKPSYGSGYQPHQGQQQ-SY-----SQSQYSNYGPP 769
Query: 540 QSGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRA 599
Q GY Q N +Y + SPG GG YS+ S + SG R+
Sbjct: 770 QGKQKGYNHGQG-----NYSSYSNSYGSPGGGGG---SDYSYE----SKFNYSGSGG-RS 816
Query: 600 PPSNYGA 606
++YG+
Sbjct: 817 GGNSYGS 823
Score = 122 (48.0 bits), Expect = 0.00079, P = 0.00079
Identities = 63/212 (29%), Positives = 77/212 (36%)
Query: 411 YSYSQPPAS-GYNQ---QG--QGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNV 464
Y Y A+ GY+Q G G A GG SGYG Y Q YNS +
Sbjct: 674 YGYGGNSATAGYSQFYSNGGHSGNAGGGGGGGGGGSSGYGS---YYQGDNYNSPVPPKHA 730
Query: 465 NNTSQEG--HTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPS 522
G PSYG+ Q S + G G+Q N + S
Sbjct: 731 GKKQPHGGQQKPSYGSGYQPHQGQQQSYSQSQYSNYGPPQGKQKGYNHGQ-GNYSSYSNS 789
Query: 523 YGVPPTSQSGYGSQVPPQS--GYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYS 580
YG P G GS +S Y+G G N G + +PGS GGYG G S
Sbjct: 790 YGSPG---GGGGSDYSYESKFNYSGSGGRSG----GNSYGSGGSSYNPGSHGGYGGSGGS 842
Query: 581 HSQP-------PPSSYAQPDSGSQRA-PPSNY 604
S S+Y P SG + PPS+Y
Sbjct: 843 SSYQGKQGGYSSQSNYNSPGSGQNYSGPPSSY 874
>UNIPROTKB|P38486 [details] [associations]
symbol:LGALS3 "Galectin-3" species:9615 "Canis lupus
familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0019863 "IgE binding" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR001079
Pfam:PF00337 PROSITE:PS51304 SMART:SM00276 SMART:SM00908
GO:GO:0005737 GO:GO:0005576 GO:GO:0030154 GO:GO:0008380
GO:GO:0030246 GO:GO:0006397 GO:GO:0045087 GO:GO:0005681
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 HOVERGEN:HBG006255 EMBL:L23429 PIR:A49688
UniGene:Cfa.797 ProteinModelPortal:P38486 SMR:P38486 STRING:P38486
PRIDE:P38486 eggNOG:NOG312075 HOGENOM:HOG000246423
InParanoid:P38486 OrthoDB:EOG4C87TX InterPro:IPR015534
PANTHER:PTHR11346:SF26 Uniprot:P38486
Length = 296
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 34/72 (47%), Positives = 34/72 (47%)
Query: 300 PAMAGGYSQQGYQARPPTSWGTPGAPSMQQPG-Y-GYVQPGAYPGQTPQYNM-SQPPYGG 356
PA AGGY Y P G P PG Y G PG YPGQ P Q P GG
Sbjct: 30 PAGAGGYPGASYPGAYPGQAPPGGYPGQAPPGGYPGQAPPGGYPGQAPPGGYPGQAPPGG 89
Query: 357 YPSQPTPGGYPG 368
YP Q PGGYPG
Sbjct: 90 YPGQAPPGGYPG 101
Score = 135 (52.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 31/67 (46%), Positives = 35/67 (52%)
Query: 303 AGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNM-SQPPYGGYPSQP 361
+G + QG+ P WG A + PG Y PGAYPGQ P Q P GGYP Q
Sbjct: 14 SGNPNPQGW----PGPWGNQPAGAGGYPGASY--PGAYPGQAPPGGYPGQAPPGGYPGQA 67
Query: 362 TPGGYPG 368
PGGYPG
Sbjct: 68 PPGGYPG 74
Score = 115 (45.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 42/124 (33%), Positives = 48/124 (38%)
Query: 486 PPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ-PSYGVPPTSQ-SGYGSQVPPQSGY 543
P P G Q G G P ASYP Q P G P + GY Q PP GY
Sbjct: 17 PNPQGWPGPWGNQPAGAGGYPG---ASYPGAYPGQAPPGGYPGQAPPGGYPGQAPP-GGY 72
Query: 544 AGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDS-GSQRAPPS 602
G P A P Y Q PG G PG ++ P +Y P + G+Q PS
Sbjct: 73 PGQAPPGGYPGQAPPGGY-PGQAPPGGYPGQAPPG-TYPGPTAPAYPGPTAPGTQPGQPS 130
Query: 603 NYGA 606
GA
Sbjct: 131 GPGA 134
Score = 42 (19.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 361 PTPGGYPGNW 370
P P G+PG W
Sbjct: 17 PNPQGWPGPW 26
>UNIPROTKB|D4ABC5 [details] [associations]
symbol:Ss18 "Protein Ss18" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IEA] RGD:1311919 GO:GO:0000226
GO:GO:0042493 GO:GO:0045944 GO:GO:0007243 GO:GO:0000902
GO:GO:0048013 GO:GO:0005881 GO:GO:0030374
GeneTree:ENSGT00500000044808 InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 CTD:6760 KO:K15623 OrthoDB:EOG4RFKTH IPI:IPI00569484
RefSeq:NP_001094370.1 UniGene:Rn.1014 ProteinModelPortal:D4ABC5
Ensembl:ENSRNOT00000032454 GeneID:361295 KEGG:rno:361295
NextBio:675851 ArrayExpress:D4ABC5 Uniprot:D4ABC5
Length = 418
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 63/172 (36%), Positives = 69/172 (40%)
Query: 411 YSYS-QPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQ 469
YS+ Q P G NQQ Y D + Y GY Q P +QGY+ Y +
Sbjct: 275 YSHGGQGPPEGMNQQ---YYPDGHNDY-----GYQQ--PSYPEQGYDRP--YEESSPHYC 322
Query: 470 EGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTS 529
EG YG Q D+ Q PPP QQGY QQ P YP Q Q YG PT
Sbjct: 323 EGGNSQYGQQQDAYQGPPP--------QQGYPPQQQQYPGQQGYPGQ---QQGYG--PT- 368
Query: 530 QSGYGSQVP--PQS-G--YAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQ 576
Q G G Q P PQ G Y GY Q P PP G G Y Q
Sbjct: 369 QGGPGPQYPNYPQGQGQQYGGYRPTQPGPP--QPPQQRPYGYDQGQYGNYQQ 418
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 61/189 (32%), Positives = 70/189 (37%)
Query: 416 PPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPS 475
PPA Q G G H P G G + Q NS+ N+ ++S G
Sbjct: 114 PPAPHMQNQMNGQMP---GPNHMPMQGPGPS----QLSMTNSSM---NMPSSSH-GSMGG 162
Query: 476 YGAQGDSTQAPPPVQSSAAMGQQGYGTGQQ-PSPNTASYPPQGAT---QP---SYGVPPT 528
Y S+Q+ P VQ+ M Q G G P PN P QG QP Y +PP
Sbjct: 163 YNHSVPSSQSMP-VQNQMTMSQ-GQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYSMPPG 220
Query: 529 SQSGYGSQVPPQS--GYAGYG---MPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHS- 582
Y Q P G G M Q Q P PP G QQ G YG YSH
Sbjct: 221 GAQHYQGQQAPMGLMGQVNQGSHMMGQRQMPPYRPPQQGPPQQYSGQEDYYGDQ-YSHGG 279
Query: 583 QPPPSSYAQ 591
Q PP Q
Sbjct: 280 QGPPEGMNQ 288
WARNING: HSPs involving 519 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.306 0.127 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 669 583 0.00082 120 3 11 23 0.41 35
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 769
No. of states in DFA: 603 (64 KB)
Total size of DFA: 289 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 71.96u 0.10s 72.06t Elapsed: 00:00:04
Total cpu time: 72.10u 0.10s 72.20t Elapsed: 00:00:04
Start: Mon May 20 20:34:26 2013 End: Mon May 20 20:34:30 2013
WARNINGS ISSUED: 2