BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005923
(669 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 156/305 (51%), Gaps = 29/305 (9%)
Query: 356 SLTLYKFQDLKIATGSFSEENRIQ----GSVYRGSF-KGDDAAVKVMKGD--------VS 402
L + ++L++A+ +FS +N + G VY+G G AVK +K +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
+E+ ++ H N++RL GFC+ LVY + NG+++ L R ++ L W +R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQ 142
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE-SDEHEQGG 521
+IA A L YLH + +P +H+++K +NILLD A + +FGLA+ + D H
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH---- 198
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREA--VTGDQNCEAE 579
+ V GT G++APEY+ G + K DVF +GV++LEL++G+ A + N +
Sbjct: 199 ----VXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 254
Query: 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
+L + +L+E +KL +D L+ Y + + Q+A CT RP +SEV
Sbjct: 255 MLLDWVKGLLKE----KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
Query: 640 FVTLS 644
L
Sbjct: 311 VRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 356 SLTLYKFQDLKIATGSFSEENRIQ----GSVYRGSF-KGDDAAVKVMKGD--------VS 402
L + ++L++A+ +F +N + G VY+G G AVK +K +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
+E+ ++ H N++RL GFC+ LVY + NG+++ L R ++ L W +R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQ 134
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE-SDEHEQGG 521
+IA A L YLH + +P +H+++K +NILLD A + +FGLA+ + D H
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH---- 190
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREA--VTGDQNCEAE 579
+ V G G++APEY+ G + K DVF +GV++LEL++G+ A + N +
Sbjct: 191 ----VXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
Query: 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
+L + +L+E +KL +D L+ Y + + Q+A CT RP +SEV
Sbjct: 247 MLLDWVKGLLKE----KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
Query: 640 FVTLS 644
L
Sbjct: 303 VRMLE 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 150/301 (49%), Gaps = 39/301 (12%)
Query: 360 YKFQDLKIATGSFSEE------NRIQ----GSVYRGSFKGDDAAVKVM-----------K 398
+ F +LK T +F E N++ G VY+G AVK + K
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 399 GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTW 458
EI ++ K H N++ L GF + LVY + NG+L D L + L+W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSW 126
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
R +IA AN +N+LH+ ++H+++K++NILLD AKI++FGLAR++E
Sbjct: 127 HMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578
+ +VGT YMAPE + G ITPK D+++FGVV+LE+++G AV D++ E
Sbjct: 184 ------VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV--DEHREP 234
Query: 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638
+LL + E + + + +ID + N+ +M +A C N RP I +
Sbjct: 235 QLL---LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKK 290
Query: 639 V 639
V
Sbjct: 291 V 291
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 150/301 (49%), Gaps = 39/301 (12%)
Query: 360 YKFQDLKIATGSFSEE------NRIQ----GSVYRGSFKGDDAAVKVM-----------K 398
+ F +LK T +F E N++ G VY+G AVK + K
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 399 GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTW 458
EI ++ K H N++ L GF + LVY + NG+L D L + L+W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSW 132
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
R +IA AN +N+LH+ ++H+++K++NILLD AKI++FGLAR++E
Sbjct: 133 HMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 188
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578
+ +VGT YMAPE + G ITPK D+++FGVV+LE+++G AV D++ E
Sbjct: 189 -----TVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAV--DEHREP 240
Query: 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638
+LL + E + + + +ID + N+ +M +A C N RP I +
Sbjct: 241 QLL---LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 639 V 639
V
Sbjct: 297 V 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 150/301 (49%), Gaps = 39/301 (12%)
Query: 360 YKFQDLKIATGSFSEE------NRIQ----GSVYRGSFKGDDAAVKVM-----------K 398
+ F +LK T +F E N++ G VY+G AVK + K
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 399 GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTW 458
EI ++ K H N++ L GF + LVY + NG+L D L + L+W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSW 132
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
R +IA AN +N+LH+ ++H+++K++NILLD AKI++FGLAR++E
Sbjct: 133 HMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 188
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578
+ +VGT YMAPE + G ITPK D+++FGVV+LE+++G AV D++ E
Sbjct: 189 -----TVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAV--DEHREP 240
Query: 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638
+LL + E + + + +ID + N+ +M +A C N RP I +
Sbjct: 241 QLL---LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 639 V 639
V
Sbjct: 297 V 297
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 147/293 (50%), Gaps = 28/293 (9%)
Query: 364 DLKIATGSFSEE----NRIQGSVYRGSFK-GDDAAVKVMKGDVSS-------EINILKKI 411
DL+ AT +F + + + G VY+G + G A+K + S EI L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 412 NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANA 471
H +++ L GFC L+Y++ +NG L L+ + T +++W+QR++I A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-SMSWEQRLEICIGAARG 151
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHV 530
L+YLH +H+++K+ NILLD N KIT+FG+++ E D+ L V
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ-------THLXXVV 201
Query: 531 VGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590
GT GY+ PEY G +T K DV++FGVV+ E+L R A+ Q+ E++ +++
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV--QSLPREMV--NLAEWAV 257
Query: 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
ES+ +L +DP+L ++ + A C A RPS+ +V L
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 128/243 (52%), Gaps = 35/243 (14%)
Query: 360 YKFQDLKIATGSFSEE------NRIQ----GSVYRGSFKGDDAAVKVM-----------K 398
+ F +LK T +F E N+ G VY+G AVK + K
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 399 GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTW 458
EI + K H N++ L GF + LVY + NG+L D L + L+W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSC--LDGTPPLSW 123
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
R +IA AN +N+LH+ ++H+++K++NILLD AKI++FGLAR++ E
Sbjct: 124 HXRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARAS-----E 175
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578
+ + +R +VGT Y APE + G ITPK D+++FGVV+LE+++G AV D++ E
Sbjct: 176 KFAQXVXXSR-IVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV--DEHREP 231
Query: 579 ELL 581
+LL
Sbjct: 232 QLL 234
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 146/292 (50%), Gaps = 26/292 (8%)
Query: 364 DLKIATGSFSEE----NRIQGSVYRGSFK-GDDAAVKVMKGDVSS-------EINILKKI 411
DL+ AT +F + + + G VY+G + G A+K + S EI L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 412 NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANA 471
H +++ L GFC L+Y++ +NG L L+ + T +++W+QR++I A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-SMSWEQRLEICIGAARG 151
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+YLH +H+++K+ NILLD N KIT+FG+++ E G L V
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGT----ELGQTHLXXV--VK 202
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591
GT GY+ PEY G +T K DV++FGVV+ E+L R A+ Q+ E++ +++ E
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV--QSLPREMV--NLAEWAVE 258
Query: 592 SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
S+ +L +DP+L ++ + A C A RPS+ +V L
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 27/207 (13%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKV-MKGDVSSE--------INILKKINHSNI 416
KI GSF G+V+R + G D AVK+ M+ D +E + I+K++ H NI
Sbjct: 44 KIGAGSF-------GTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G N +V E+ G+L LH + + L ++R+ +AYDVA +NYLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS--GAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGY 536
NPP VH+NLK+ N+L+D K+ +FGL+R S ++ GT +
Sbjct: 155 N-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST--------FLSSKSAAGTPEW 205
Query: 537 MAPEYIENGVITPKLDVFAFGVVVLEL 563
MAPE + + K DV++FGV++ EL
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 27/207 (13%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKV-MKGDVSSE--------INILKKINHSNI 416
KI GSF G+V+R + G D AVK+ M+ D +E + I+K++ H NI
Sbjct: 44 KIGAGSF-------GTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G N +V E+ G+L LH + + L ++R+ +AYDVA +NYLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS--GAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGY 536
NPP VH++LK+ N+L+D K+ +FGL+R S ++ GT +
Sbjct: 155 N-RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS--------XFLXSKXAAGTPEW 205
Query: 537 MAPEYIENGVITPKLDVFAFGVVVLEL 563
MAPE + + K DV++FGV++ EL
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 122/286 (42%), Gaps = 54/286 (18%)
Query: 380 GSVYRGSFKGDDAAVKVMKGD-----------VSSEINILKKINHSNIIRLSGFCVHEGN 428
G VYR + GD+ AVK + D V E + + H NII L G C+ E N
Sbjct: 21 GKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNL 488
LV EFA G L+ L R + W A +A +NYLH P +H++L
Sbjct: 81 LCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIVPIIHRDL 134
Query: 489 KTSNILL--------DTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
K+SNIL+ +N KIT+FGLAR + G Y +MAPE
Sbjct: 135 KSSNILILQKVENGDLSNKILKITDFGLARE----------WHRTTKMSAAGAYAWMAPE 184
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRG 600
I + + DV+++GV++ ELL+G E+ + I + V
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTG------------EVPFRGIDGLAVAYGVAMNKLA 232
Query: 601 FIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
PS E A+L ++C D ++RPS + + L+ I
Sbjct: 233 LPIPSTCPE-------PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 146/316 (46%), Gaps = 75/316 (23%)
Query: 361 KFQDLKIATGSFSEENRIQGSVYRGSFKGD----DAAVKVMKG--------DVSSEINIL 408
KFQD+ I G+F G V + K D DAA+K MK D + E+ +L
Sbjct: 25 KFQDV-IGEGNF-------GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 76
Query: 409 KKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRY-----------QTSDNL 456
K+ +H NII L G C H G YL E+A +G L D+L +R T+ L
Sbjct: 77 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +Q + A DVA ++YL + ++H+NL NIL+ N AKI +FGL+R E
Sbjct: 137 SSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV-- 191
Query: 517 HEQGGYGLQLTRHVVGTYG-----YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+V T G +MA E + V T DV+++GV++ E++S +
Sbjct: 192 ------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LG 235
Query: 572 GDQNCEAELLYASISRVLEESNVREKL-RGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDL 630
G C + + + EKL +G+ R E PL+ + L + C
Sbjct: 236 GTPYCG-----------MTCAELYEKLPQGY-----RLEKPLNCDDEVYDLMRQCWREKP 279
Query: 631 NARPSISEVFVTLSKI 646
RPS +++ V+L+++
Sbjct: 280 YERPSFAQILVSLNRM 295
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 146/316 (46%), Gaps = 75/316 (23%)
Query: 361 KFQDLKIATGSFSEENRIQGSVYRGSFKGD----DAAVKVMKG--------DVSSEINIL 408
KFQD+ I G+F G V + K D DAA+K MK D + E+ +L
Sbjct: 28 KFQDV-IGEGNF-------GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 79
Query: 409 KKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRY-----------QTSDNL 456
K+ +H NII L G C H G YL E+A +G L D+L +R T+ L
Sbjct: 80 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +Q + A DVA ++YL + ++H++L NIL+ N AKI +FGL+R E
Sbjct: 140 SSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV-- 194
Query: 517 HEQGGYGLQLTRHVVGTYG-----YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+V T G +MA E + V T DV+++GV++ E++S +
Sbjct: 195 ------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LG 238
Query: 572 GDQNCEAELLYASISRVLEESNVREKL-RGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDL 630
G C + + + EKL +G+ R E PL+ + L + C
Sbjct: 239 GTPYCG-----------MTCAELYEKLPQGY-----RLEKPLNCDDEVYDLMRQCWREKP 282
Query: 631 NARPSISEVFVTLSKI 646
RPS +++ V+L+++
Sbjct: 283 YERPSFAQILVSLNRM 298
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 146/316 (46%), Gaps = 75/316 (23%)
Query: 361 KFQDLKIATGSFSEENRIQGSVYRGSFKGD----DAAVKVMKG--------DVSSEINIL 408
KFQD+ I G+F G V + K D DAA+K MK D + E+ +L
Sbjct: 18 KFQDV-IGEGNF-------GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 69
Query: 409 KKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRY-----------QTSDNL 456
K+ +H NII L G C H G YL E+A +G L D+L +R T+ L
Sbjct: 70 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +Q + A DVA ++YL + ++H++L NIL+ N AKI +FGL+R E
Sbjct: 130 SSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV-- 184
Query: 517 HEQGGYGLQLTRHVVGTYG-----YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+V T G +MA E + V T DV+++GV++ E++S +
Sbjct: 185 ------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LG 228
Query: 572 GDQNCEAELLYASISRVLEESNVREKL-RGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDL 630
G C + + + EKL +G+ R E PL+ + L + C
Sbjct: 229 GTPYCG-----------MTCAELYEKLPQGY-----RLEKPLNCDDEVYDLMRQCWREKP 272
Query: 631 NARPSISEVFVTLSKI 646
RPS +++ V+L+++
Sbjct: 273 YERPSFAQILVSLNRM 288
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 128/296 (43%), Gaps = 55/296 (18%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKG--------DVSSEINILKKINH 413
I G F G V RG K A+K +KG + SE +I+ + H
Sbjct: 24 IGAGEF-------GEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 76
Query: 414 SNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALN 473
NIIRL G + ++ EF +NGAL +L N Q T Q V + +A+ +
Sbjct: 77 PNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ----FTVIQLVGMLRGIASGMR 132
Query: 474 YLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE---SDEHEQGGYGLQLTRHV 530
YL + + YVH++L NIL+++NL K+++FGL+R E SD E G ++
Sbjct: 133 YLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR- 188
Query: 531 VGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLE 590
+ APE I T D +++G+V+ E++S E D +
Sbjct: 189 -----WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS--------------- 228
Query: 591 ESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ + I+ R P D S+ QL +C D NARP +V L K+
Sbjct: 229 ----NQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 127/288 (44%), Gaps = 39/288 (13%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG--------DVSSEINILKKINHSNIIR 418
I G F E R G + K A+K +KG + SE +I+ + H NIIR
Sbjct: 22 IGAGEFGEVCR--GRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY 478
L G + ++ EF +NGAL +L N Q T Q V + +A+ + YL +
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ----FTVIQLVGMLRGIASGMRYLAEM 135
Query: 479 TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMA 538
+ YVH++L NIL+++NL K+++FGL+R E + + Y L + + A
Sbjct: 136 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP-TYTSSLGGKI--PIRWTA 189
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKL 598
PE I T D +++G+V+ E++S E D + + +
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS-------------------NQDV 230
Query: 599 RGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
I+ R P D S+ QL +C D NARP +V L K+
Sbjct: 231 INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 50 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E+ +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 163
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ YVH++L NIL+++NL K+++FGLAR E D + Y TR
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDD--PEAAY---TTRGGKIPIR 215
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 257
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 258 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 50 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E+ +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 163
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ YVH++L NIL+++NL K+++FGL+R E D + Y TR
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PEAAY---TTRGGKIPIR 215
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 257
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 258 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 50 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E+ +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 163
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ YVH++L NIL+++NL K+++FGL+R E D + Y TR
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PEAAY---TTRGGKIPIR 215
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 257
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 258 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 50 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E+ +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 163
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ YVH++L NIL+++NL K+++FGL+R E D + Y TR
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PEAAY---TTRGGKIPIR 215
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 257
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 258 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 50 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E+ +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 163
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ YVH++L NIL+++NL K+++FGL+R E D + Y TR
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PEAAY---TTRGGKIPIR 215
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 257
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 258 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 48 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 105
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E+ +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 161
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ YVH++L NIL+++NL K+++FGL+R E D + Y TR
Sbjct: 162 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PEAAY---TTRGGKIPIR 213
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 255
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 256 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 50 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E+ +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 163
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ YVH++L NIL+++NL K+++FGL R E D + Y TR
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD--PEAAY---TTRGGKIPIR 215
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 257
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 258 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 38 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 95
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E+ +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 151
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ YVH++L NIL+++NL K+++FGL+R E D + Y TR
Sbjct: 152 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PEAAY---TTRGGKIPIR 203
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 245
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 246 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 21 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E+ +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 134
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ YVH++L NIL+++NL K+++FGL+R E D + Y TR
Sbjct: 135 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PEAAY---TTRGGKIPIR 186
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 228
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 229 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 136/294 (46%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVS-----SEINI 407
ESL L K ++ G F G V+ G++ G+ A+K +K G +S E I
Sbjct: 9 ESLQLIK----RLGNGQF-------GEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQI 57
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ + G+L D+L + L V +A
Sbjct: 58 MKKLKHDKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKDGEGRA---LKLPNLVDMAAQ 113
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
VA + Y+ + Y+H++L+++NIL+ L KI +FGLAR E +E QG + +
Sbjct: 114 VAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPI 170
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL++ GR G N E
Sbjct: 171 KWT----------APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE------ 214
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VLE+ RG+ P P D S+ +L +C D RP+
Sbjct: 215 ----VLEQVE-----RGYRMPC-----PQDCPISLHELMIHCWKKDPEERPTFE 254
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 23 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 81
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H+NL+ +N
Sbjct: 82 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNLRAAN 135
Query: 493 ILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E+ E + ++ T APE I G T
Sbjct: 136 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----------APEAINYGTFTI 185
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 186 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 29/247 (11%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
D SE +I+ + +H N+I L G ++ EF +NG+L +L N Q T
Sbjct: 80 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ----FTVI 135
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
Q V + +A + YL YVH++L NIL+++NL K+++FGL+R E D +
Sbjct: 136 QLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 192
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579
Y L + + APE I+ T DV+++G+V+ E++S E D
Sbjct: 193 -TYTSALGGKI--PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT---- 245
Query: 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
+ + I+ R P+D ++ QL +C D N RP ++
Sbjct: 246 ---------------NQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQI 290
Query: 640 FVTLSKI 646
TL K+
Sbjct: 291 VNTLDKM 297
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 50 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E+ +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 163
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ +VH++L NIL+++NL K+++FGL+R E D + Y TR
Sbjct: 164 ---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PEAAY---TTRGGKIPIR 215
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 257
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 258 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 50 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 163
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ YVH++L NIL+++NL K+++FGL+R E D + Y TR
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PEAAY---TTRGGKIPIR 215
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 257
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 258 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 21 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 134
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ YVH++L NIL+++NL K+++FGL+R E D + Y TR
Sbjct: 135 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PEAAY---TTRGGKIPIR 186
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 228
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 229 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 37 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 95
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 96 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 149
Query: 493 ILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E+ E + ++ T APE I G T
Sbjct: 150 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----------APEAINYGTFTI 199
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 200 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 229
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 39/234 (16%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 11 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 59
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L +T L Q V +A
Sbjct: 60 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQ 115
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 116 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 172
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 173 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 216
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 91
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 92 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 145
Query: 493 ILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E+ E + ++ T APE I G T
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----------APEAINYGTFTI 195
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 32 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 90
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 91 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 144
Query: 493 ILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E+ E + ++ T APE I G T
Sbjct: 145 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----------APEAINYGTFTI 194
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 195 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 224
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 29/247 (11%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
D SE +I+ + +H N+I L G ++ EF +NG+L +L N Q T
Sbjct: 54 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ----FTVI 109
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
Q V + +A + YL YVH+ L NIL+++NL K+++FGL+R E D +
Sbjct: 110 QLVGMLRGIAAGMKYLADMN---YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 166
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579
Y L + + APE I+ T DV+++G+V+ E++S E D
Sbjct: 167 -TYTSALGGKI--PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT---- 219
Query: 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
+ + I+ R P+D ++ QL +C D N RP ++
Sbjct: 220 ---------------NQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQI 264
Query: 640 FVTLSKI 646
TL K+
Sbjct: 265 VNTLDKM 271
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 36 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 94
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 95 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 148
Query: 493 ILLDTNLRAKITNFGLARSAESDE---HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E E + ++ T APE I G T
Sbjct: 149 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----------APEAINYGTFTI 198
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 199 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 228
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 85
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 86 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 139
Query: 493 ILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E+ E + ++ T APE I G T
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----------APEAINYGTFTI 189
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 18 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 66
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KKI H +++L V E Y+V E+ G+L D+L + L Q V +A
Sbjct: 67 MKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQ 122
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 123 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 180 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------ 223
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VL++ RG+ P P + S+ L C D RP+
Sbjct: 224 ----VLDQVE-----RGYRMPC-----PPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 35 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 93
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 94 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 147
Query: 493 ILLDTNLRAKITNFGLARSAESDE---HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E E + ++ T APE I G T
Sbjct: 148 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----------APEAINYGTFTI 197
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 198 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 227
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 31/247 (12%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
D E +I+ + +H NII L G +V E+ +NG+L +L N Q T
Sbjct: 69 DFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ----FTVI 124
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
Q V + ++ + YL ++ YVH++L NIL+++NL K+++FGL+R E D +
Sbjct: 125 QLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PE 179
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579
Y TR + APE I T DV+++G+V+ E++S E E
Sbjct: 180 AAY---TTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGE------RPYWE 230
Query: 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
+ + + +EE G+ PS P+D ++ QL +C + N+RP E+
Sbjct: 231 MTNQDVIKAVEE--------GYRLPS-----PMDCPAALYQLMLDCWQKERNSRPKFDEI 277
Query: 640 FVTLSKI 646
L K+
Sbjct: 278 VNMLDKL 284
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 91
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 92 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 145
Query: 493 ILLDTNLRAKITNFGLARSAESDE---HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E E + ++ T APE I G T
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----------APEAINYGTFTI 195
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 85
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 86 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 139
Query: 493 ILLDTNLRAKITNFGLARSAESDE---HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E E + ++ T APE I G T
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----------APEAINYGTFTI 189
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 22 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 80
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 81 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 134
Query: 493 ILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E+ E + ++ T APE I G T
Sbjct: 135 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----------APEAINYGTFTI 184
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 185 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 29 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 87
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 88 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 141
Query: 493 ILLDTNLRAKITNFGLARSAESDE---HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E E + ++ T APE I G T
Sbjct: 142 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----------APEAINYGTFTI 191
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 192 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 221
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 39/235 (16%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 15 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 63
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ + G+L D+L +T L Q V ++
Sbjct: 64 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKG---ETGKYLRLPQLVDMSAQ 119
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 120 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 176
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 177 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 39/234 (16%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMK-GDVS-----SEINI 407
ESL L ++K+ G F G V+ G++ G A+K +K G +S E +
Sbjct: 184 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 232
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L +T L Q V +A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQ 288
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 289 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 346 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 39/234 (16%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMK-GDVS-----SEINI 407
ESL L ++K+ G F G V+ G++ G A+K +K G +S E +
Sbjct: 184 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 232
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L +T L Q V +A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQ 288
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 289 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 346 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 85
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 86 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 139
Query: 493 ILLDTNLRAKITNFGLAR---SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR AE E + ++ T APE I G T
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWT----------APEAINYGTFTI 189
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCE 577
K DV++FG+++ E+++ GR G N E
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 33/231 (14%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 267 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 315
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L +T L Q V +A
Sbjct: 316 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQ 371
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT 527
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ Q
Sbjct: 372 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT----ARQGA 424
Query: 528 RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577
+ + + APE G T K DV++FG+++ EL + GR G N E
Sbjct: 425 KFPI---KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 472
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 7 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 55
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L + L Q V +A
Sbjct: 56 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQ 111
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 112 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 168
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 169 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------ 212
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VL++ RG+ P P + S+ L C D RP+
Sbjct: 213 ----VLDQVE-----RGYRMPC-----PPECPESLHDLMCQCWRKDPEERPTFE 252
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 85
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 86 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 139
Query: 493 ILLDTNLRAKITNFGLARSAESDE---HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E E + ++ T APE I G T
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----------APEAINYGTFTI 189
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 9 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 57
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L + L Q V +A
Sbjct: 58 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQ 113
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 114 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 170
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 171 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------ 214
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VL++ RG+ P P + S+ L C D RP+
Sbjct: 215 ----VLDQVE-----RGYRMPC-----PPECPESLHDLMCQCWRKDPEERPTFE 254
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 28/210 (13%)
Query: 380 GSVYRGSFKGD-DAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLV 432
G V+ G + G AVK +K G +S +E N++K++ H ++RL E Y++
Sbjct: 28 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 86
Query: 433 YEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
E+ +NG+L D+L + + LT + + +A +A + ++ + Y+H++L+ +N
Sbjct: 87 TEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 140
Query: 493 ILLDTNLRAKITNFGLARSAESDE---HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
IL+ L KI +FGLAR E +E E + ++ T APE I G T
Sbjct: 141 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----------APEAINYGTFTI 190
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
K DV++FG+++ E+++ GR G N E
Sbjct: 191 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV 220
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 18 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 66
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L + L Q V +A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQ 122
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 123 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 180 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------ 223
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VL++ RG+ P P + S+ L C D RP+
Sbjct: 224 ----VLDQVE-----RGYRMPC-----PPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 39/234 (16%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMK-GDVS-----SEINI 407
ESL L ++K+ G F G V+ G++ G A+K +K G +S E +
Sbjct: 184 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 232
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L +T L Q V +A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQ 288
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 289 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 346 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 18 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 66
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L + L Q V +A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQ 122
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 123 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 180 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------ 223
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VL++ RG+ P P + S+ L C D RP+
Sbjct: 224 ----VLDQVE-----RGYRMPC-----PPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 67/300 (22%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++K +E+ +L+K H NI
Sbjct: 43 RIGSGSF-------GTVYKGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI 94
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLH--SNRYQTSDNLTWKQRVQIAYDVANALNY 474
+ G+ + N +V ++ + +L LH ++Q Q + IA A ++Y
Sbjct: 95 LLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMF------QLIDIARQTAQGMDY 147
Query: 475 LHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA--RSAESDEHEQGGYGLQLTRHVVG 532
LH +H+++K++NI L L KI +FGLA +S S G Q G
Sbjct: 148 LHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS--------GSQQVEQPTG 196
Query: 533 TYGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589
+ +MAPE I +N + + DV+++G+V+ EL++G EL Y+ I
Sbjct: 197 SVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG------------ELPYSHI---- 240
Query: 590 EESNVREKL-----RGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
N R+++ RG+ P L Y + +M +L +C RP ++ ++
Sbjct: 241 ---NNRDQIIFMVGRGYASPDLSKLYK-NCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 18 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 66
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G L D+L + L Q V +A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKG---EMGKYLRLPQLVDMAAQ 122
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 123 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 180 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------ 223
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VL++ RG+ P P + S+ L C D RP+
Sbjct: 224 ----VLDQVE-----RGYRMPC-----PPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 18 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 66
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L + L Q V +A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVCEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQ 122
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 123 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 180 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------ 223
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VL++ RG+ P P + S+ L C D RP+
Sbjct: 224 ----VLDQVE-----RGYRMPC-----PPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 18 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 66
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G L D+L + L Q V +A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGCLLDFLKG---EMGKYLRLPQLVDMAAQ 122
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 123 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 180 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------ 223
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VL++ RG+ P P + S+ L C D RP+
Sbjct: 224 ----VLDQVE-----RGYRMPC-----PPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 39/235 (16%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 15 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 63
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ + G+L D+L +T L Q V ++
Sbjct: 64 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKG---ETGKYLRLPQLVDMSAQ 119
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E QG + +
Sbjct: 120 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPI 176
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 177 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 123/251 (49%), Gaps = 45/251 (17%)
Query: 336 LFPQASNSLSHPQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGS----FKGD- 390
+FP +S+ P + + E +TL + ++ GSF G VY G+ KG+
Sbjct: 1 VFP---SSVYVPDEWEVSREKITLLR----ELGQGSF-------GMVYEGNARDIIKGEA 46
Query: 391 --DAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGA 440
AVK + S +E +++K +++RL G T +V E +G
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 441 LSDWLHSNRYQTSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL 495
L +L S R + +N T ++ +Q+A ++A+ + YL+ +VH+NL N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMV 163
Query: 496 DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554
+ KI +FG+ R E+D + +GG GL R +MAPE +++GV T D++
Sbjct: 164 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMAPESLKDGVFTTSSDMW 216
Query: 555 AFGVVVLELLS 565
+FGVV+ E+ S
Sbjct: 217 SFGVVLWEITS 227
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 121/282 (42%), Gaps = 47/282 (16%)
Query: 380 GSVYRGSFKGDDA------AVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVH 425
G VY+G K A+K +K D E I+ + +H NIIRL G
Sbjct: 58 GEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK 117
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
++ E+ +NGAL +L + + Q V + +A + YL N YVH
Sbjct: 118 YKPMMIITEYMENGALDKFLR----EKDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVH 170
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESD-EHEQGGYGLQLTRHVVGTYGYMAPEYIEN 544
++L NIL+++NL K+++FGL+R E D E G ++ + APE I
Sbjct: 171 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR------WTAPEAISY 224
Query: 545 GVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDP 604
T DV++FG+V+ E+++ E R E + E ++ I+
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTYGE------------------RPYWELSNHEVMKA-IND 265
Query: 605 SLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
R P+D ++ QL C + RP +++ L K+
Sbjct: 266 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 18 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 66
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L + L Q V +A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQ 122
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E QG + +
Sbjct: 123 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI 179
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 180 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------ 223
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VL++ RG+ P P + S+ L C D RP+
Sbjct: 224 ----VLDQVE-----RGYRMPC-----PPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 45/252 (17%)
Query: 335 SLFPQASNSLSHPQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGS----FKGD 390
+FP +S+ P + + E +TL + ++ GSF G VY G+ KG+
Sbjct: 1 GVFP---SSVYVPDEWEVSREKITLLR----ELGQGSF-------GMVYEGNARDIIKGE 46
Query: 391 ---DAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNG 439
AVK + S +E +++K +++RL G T +V E +G
Sbjct: 47 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 106
Query: 440 ALSDWLHSNRYQTSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
L +L S R + +N T ++ +Q+A ++A+ + YL+ +VH+NL N +
Sbjct: 107 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCM 163
Query: 495 LDTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
+ + KI +FG+ R E+D + +GG GL R +MAPE +++GV T D+
Sbjct: 164 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMAPESLKDGVFTTSSDM 216
Query: 554 FAFGVVVLELLS 565
++FGVV+ E+ S
Sbjct: 217 WSFGVVLWEITS 228
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 39/234 (16%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMK-GDVS-----SEINI 407
ESL L K K+ G F G V+ ++ K AVK MK G +S +E N+
Sbjct: 15 ESLKLEK----KLGAGQF-------GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANV 63
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+K + H +++L E Y++ EF G+L D+L S+ + + +
Sbjct: 64 MKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQ 119
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH---EQGGYGL 524
+A + ++ + Y+H++L+ +NIL+ +L KI +FGLAR E +E+ E + +
Sbjct: 120 IAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577
+ T APE I G T K DV++FG++++E+++ GR G N E
Sbjct: 177 KWT----------APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 220
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK--------GDVSSEINILKKINHSN 415
D + G F E G + S K A+K +K D E +I+ + +H N
Sbjct: 50 DKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
IIRL G +V E +NG+L +L + Q T Q V + +A+ + YL
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL 163
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
++ VH++L NIL+++NL K+++FGL+R E D + Y TR
Sbjct: 164 ---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--PEAAY---TTRGGKIPIR 215
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ +PE I T DV+++G+V+ E++S E R E + +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------------RPYWEMSNQ 257
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
+ ++ +D R P+D ++ QL +C D N RP ++ L K+
Sbjct: 258 DVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 18 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 66
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L + L Q V +A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQ 122
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L +NIL+ NL K+ +FGLAR E +E+ QG + +
Sbjct: 123 IASGMAYVERMN---YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 180 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------ 223
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VL++ RG+ P P + S+ L C D RP+
Sbjct: 224 ----VLDQVE-----RGYRMPC-----PPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 135/294 (45%), Gaps = 59/294 (20%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMK-GDVS-----SEINI 407
ESL L ++K+ G F G V+ G++ G A+K +K G++S E +
Sbjct: 185 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQV 233
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E Y+V E+ G+L D+L + L Q V +A
Sbjct: 234 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQ 289
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGL R E +E+ QG + +
Sbjct: 290 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPI 346
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYA 583
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 347 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------ 390
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSIS 637
VL++ RG+ P P + S+ L C D RP+
Sbjct: 391 ----VLDQVE-----RGYRMPC-----PPECPESLHDLMCQCWRKDPEERPTFE 430
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 147/322 (45%), Gaps = 61/322 (18%)
Query: 345 SHPQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG--------------- 389
S P + A E +T+ + ++ GSF G VY G KG
Sbjct: 2 SVPDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTV 50
Query: 390 DDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR 449
++AA + + +E +++K+ N +++RL G T ++ E G L +L S R
Sbjct: 51 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 110
Query: 450 YQTSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504
+ +N + + +Q+A ++A+ + YL+ +VH++L N ++ + KI
Sbjct: 111 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIG 167
Query: 505 NFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 563
+FG+ R E+D + +GG GL R +M+PE +++GV T DV++FGVV+ E+
Sbjct: 168 DFGMTRDIYETDYYRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
Query: 564 LSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAK 623
+ AE Y +S + LR ++ L ++ P + + +L +
Sbjct: 221 AT-----------LAEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLFELMR 261
Query: 624 NCTAHDLNARPSISEVFVTLSK 645
C ++ RPS E+ ++ +
Sbjct: 262 MCWQYNPKMRPSFLEIISSIKE 283
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 145/320 (45%), Gaps = 61/320 (19%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---------------DD 391
P + A E +T+ + ++ GSF G VY G KG ++
Sbjct: 2 PDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTVNE 50
Query: 392 AAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
AA + + +E +++K+ N +++RL G T ++ E G L +L S R +
Sbjct: 51 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 110
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
+N + + +Q+A ++A+ + YL+ +VH++L N ++ + KI +F
Sbjct: 111 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 167
Query: 507 GLARS-AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D +GG GL R +M+PE +++GV T DV++FGVV+ E+ +
Sbjct: 168 GMTRDIXETDXXRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
Query: 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625
AE Y +S + LR ++ L ++ P + + +L + C
Sbjct: 221 -----------LAEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLLELMRMC 261
Query: 626 TAHDLNARPSISEVFVTLSK 645
++ RPS E+ ++ +
Sbjct: 262 WQYNPKMRPSFLEIISSIKE 281
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 45/251 (17%)
Query: 336 LFPQASNSLSHPQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGS----FKGD- 390
+FP +S+ P + + E +TL + ++ GSF G VY G+ KG+
Sbjct: 1 VFP---SSVFVPDEWEVSREKITLLR----ELGQGSF-------GMVYEGNARDIIKGEA 46
Query: 391 --DAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGA 440
AVK + S +E +++K +++RL G T +V E +G
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 441 LSDWLHSNRYQTSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL 495
L +L S R + +N T ++ +Q+A ++A+ + YL+ +VH++L N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMV 163
Query: 496 DTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554
+ KI +FG+ R E+D +GG GL R +MAPE +++GV T D++
Sbjct: 164 AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-------WMAPESLKDGVFTTSSDMW 216
Query: 555 AFGVVVLELLS 565
+FGVV+ E+ S
Sbjct: 217 SFGVVLWEITS 227
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 39/234 (16%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMK-GDVS-----SEINI 407
ESL L K K+ G F G V+ ++ K AVK MK G +S +E N+
Sbjct: 188 ESLKLEK----KLGAGQF-------GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANV 236
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+K + H +++L E Y++ EF G+L D+L S+ + + +
Sbjct: 237 MKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQ 292
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH---EQGGYGL 524
+A + ++ + Y+H++L+ +NIL+ +L KI +FGLAR E +E+ E + +
Sbjct: 293 IAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 349
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577
+ T APE I G T K DV++FG++++E+++ GR G N E
Sbjct: 350 KWT----------APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 393
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 45/251 (17%)
Query: 336 LFPQASNSLSHPQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGS----FKGD- 390
+FP +S+ P + + E +TL + ++ GSF G VY G+ KG+
Sbjct: 1 VFP---SSVYVPDEWEVSREKITLLR----ELGQGSF-------GMVYEGNARDIIKGEA 46
Query: 391 --DAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGA 440
AVK + S +E +++K +++RL G T +V E +G
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 441 LSDWLHSNRYQTSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL 495
L +L S R + +N T ++ +Q+A ++A+ + YL+ +VH++L N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMV 163
Query: 496 DTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554
+ KI +FG+ R E+D +GG GL R +MAPE +++GV T D++
Sbjct: 164 AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-------WMAPESLKDGVFTTSSDMW 216
Query: 555 AFGVVVLELLS 565
+FGVV+ E+ S
Sbjct: 217 SFGVVLWEITS 227
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 23/192 (11%)
Query: 380 GSVYRGSFKGDDAAVKVMKGDVSS-----EINILKKINHSNIIRLSGFCVHE-GNTYLVY 433
G V G ++G+ AVK +K D ++ E +++ ++ HSN+++L G V E G Y+V
Sbjct: 26 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 85
Query: 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493
E+ G+L D+L S + L ++ + DV A+ YL +VH++L N+
Sbjct: 86 EYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNV 139
Query: 494 LLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
L+ + AK+++FGL + A S + + G ++ T APE + + K DV
Sbjct: 140 LVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWT----------APEALREAAFSTKSDV 188
Query: 554 FAFGVVVLELLS 565
++FG+++ E+ S
Sbjct: 189 WSFGILLWEIYS 200
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 61/320 (19%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---------------DD 391
P + A E +T+ + ++ GSF G VY G KG ++
Sbjct: 17 PDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTVNE 65
Query: 392 AAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
AA + + +E +++K+ N +++RL G T ++ E G L +L S R +
Sbjct: 66 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 125
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
+N + + +Q+A ++A+ + YL+ +VH++L N ++ + KI +F
Sbjct: 126 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 182
Query: 507 GLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D + +GG GL R +M+PE +++GV T DV++FGVV+ E+ +
Sbjct: 183 GMTRDIYETDYYRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
Query: 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625
AE Y +S + LR ++ L ++ P + + +L + C
Sbjct: 236 L-----------AEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLFELMRMC 276
Query: 626 TAHDLNARPSISEVFVTLSK 645
++ RPS E+ ++ +
Sbjct: 277 WQYNPKMRPSFLEIISSIKE 296
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 61/320 (19%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---------------DD 391
P + A E +T+ + ++ GSF G VY G KG ++
Sbjct: 10 PDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTVNE 58
Query: 392 AAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
AA + + +E +++K+ N +++RL G T ++ E G L +L S R +
Sbjct: 59 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 118
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
+N + + +Q+A ++A+ + YL+ +VH++L N ++ + KI +F
Sbjct: 119 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 175
Query: 507 GLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D + +GG GL R +M+PE +++GV T DV++FGVV+ E+ +
Sbjct: 176 GMTRDIYETDYYRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
Query: 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625
AE Y +S + LR ++ L ++ P + + +L + C
Sbjct: 229 -----------LAEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLFELMRMC 269
Query: 626 TAHDLNARPSISEVFVTLSK 645
++ RPS E+ ++ +
Sbjct: 270 WQYNPKMRPSFLEIISSIKE 289
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 114/235 (48%), Gaps = 39/235 (16%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINI 407
ESL L ++K+ G F G V+ G++ G A+K +K S E +
Sbjct: 8 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV 56
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+KK+ H +++L V E +V E+ G+L D+L +T L Q V +A
Sbjct: 57 MKKLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKG---ETGKYLRLPQLVDMAAQ 112
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGL 524
+A+ + Y+ + YVH++L+ +NIL+ NL K+ +FGLAR E +E QG + +
Sbjct: 113 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI 169
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
+ T APE G T K DV++FG+++ EL + GR G N E
Sbjct: 170 KWT----------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 145/320 (45%), Gaps = 61/320 (19%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---------------DD 391
P + A E +T+ + ++ GSF G VY G KG ++
Sbjct: 11 PDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTVNE 59
Query: 392 AAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
AA + + +E +++K+ N +++RL G T ++ E G L +L S R +
Sbjct: 60 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
+N + + +Q+A ++A+ + YL+ +VH++L N ++ + KI +F
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 176
Query: 507 GLARS-AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D +GG GL R +M+PE +++GV T DV++FGVV+ E+ +
Sbjct: 177 GMTRDIXETDXXRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
Query: 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625
AE Y +S + LR ++ L ++ P + + +L + C
Sbjct: 230 -----------LAEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLFELMRMC 270
Query: 626 TAHDLNARPSISEVFVTLSK 645
++ RPS E+ ++ +
Sbjct: 271 WQYNPKMRPSFLEIISSIKE 290
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 45/251 (17%)
Query: 336 LFPQASNSLSHPQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGS----FKGD- 390
+FP +S+ P + + E +TL + ++ GSF G VY G+ KG+
Sbjct: 1 VFP---SSVFVPDEWEVSREKITLLR----ELGQGSF-------GMVYEGNARDIIKGEA 46
Query: 391 --DAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGA 440
AVK + S +E +++K +++RL G T +V E +G
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 441 LSDWLHSNRYQTSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL 495
L +L S R + +N T ++ +Q+A ++A+ + YL+ +VH++L N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMV 163
Query: 496 DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554
+ KI +FG+ R E+D + +GG GL R +MAPE +++GV T D++
Sbjct: 164 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMAPESLKDGVFTTSSDMW 216
Query: 555 AFGVVVLELLS 565
+FGVV+ E+ S
Sbjct: 217 SFGVVLWEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 42/240 (17%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGS----FKGD---DAAVKVMKG 399
P + + E +TL + ++ GSF G VY G+ KG+ AVK +
Sbjct: 6 PDEWEVSREKITLLR----ELGQGSF-------GMVYEGNARDIIKGEAETRVAVKTVNE 54
Query: 400 DVS--------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
S +E +++K +++RL G T +V E +G L +L S R +
Sbjct: 55 SASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 114
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
+N T ++ +Q+A ++A+ + YL+ +VH++L N ++ + KI +F
Sbjct: 115 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDF 171
Query: 507 GLARS-AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D +GG GL R +MAPE +++GV T D+++FGVV+ E+ S
Sbjct: 172 GMTRDIXETDXXRKGGKGLLPVR-------WMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 61/320 (19%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---------------DD 391
P + A E +T+ + ++ GSF G VY G KG ++
Sbjct: 10 PDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTVNE 58
Query: 392 AAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
AA + + +E +++K+ N +++RL G T ++ E G L +L S R +
Sbjct: 59 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 118
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
+N + + +Q+A ++A+ + YL+ +VH++L N ++ + KI +F
Sbjct: 119 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 175
Query: 507 GLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D + +GG GL R +M+PE +++GV T DV++FGVV+ E+ +
Sbjct: 176 GMTRDIYETDYYRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
Query: 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625
AE Y +S + LR ++ L ++ P + + +L + C
Sbjct: 229 -----------LAEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLFELMRMC 269
Query: 626 TAHDLNARPSISEVFVTLSK 645
++ RPS E+ ++ +
Sbjct: 270 WQYNPKMRPSFLEIISSIKE 289
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 61/320 (19%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---------------DD 391
P + A E +T+ + ++ GSF G VY G KG ++
Sbjct: 8 PDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTVNE 56
Query: 392 AAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
AA + + +E +++K+ N +++RL G T ++ E G L +L S R +
Sbjct: 57 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 116
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
+N + + +Q+A ++A+ + YL+ +VH++L N ++ + KI +F
Sbjct: 117 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 173
Query: 507 GLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D + +GG GL R +M+PE +++GV T DV++FGVV+ E+ +
Sbjct: 174 GMTRDIYETDYYRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
Query: 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625
AE Y +S + LR ++ L ++ P + + +L + C
Sbjct: 227 -----------LAEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLFELMRMC 267
Query: 626 TAHDLNARPSISEVFVTLSK 645
++ RPS E+ ++ +
Sbjct: 268 WQYNPKMRPSFLEIISSIKE 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 61/320 (19%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---------------DD 391
P + A E +T+ + ++ GSF G VY G KG ++
Sbjct: 11 PDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTVNE 59
Query: 392 AAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
AA + + +E +++K+ N +++RL G T ++ E G L +L S R +
Sbjct: 60 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
+N + + +Q+A ++A+ + YL+ +VH++L N ++ + KI +F
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 176
Query: 507 GLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D + +GG GL R +M+PE +++GV T DV++FGVV+ E+ +
Sbjct: 177 GMTRDIYETDYYRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
Query: 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625
AE Y +S + LR ++ L ++ P + + +L + C
Sbjct: 230 -----------LAEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLFELMRMC 270
Query: 626 TAHDLNARPSISEVFVTLSK 645
++ RPS E+ ++ +
Sbjct: 271 WQYNPKMRPSFLEIISSIKE 290
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 31/247 (12%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
D SE +I+ + +H NII L G ++ E+ +NG+L +L N T
Sbjct: 55 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN----DGRFTVI 110
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
Q V + + + + YL ++ YVH++L NIL+++NL K+++FG++R E D +
Sbjct: 111 QLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD--PE 165
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579
Y TR + APE I T DV+++G+V+ E++S E D + +
Sbjct: 166 AAY---TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-- 220
Query: 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
+ + +EE G+ P P+D ++ QL +C + + RP ++
Sbjct: 221 ----DVIKAIEE--------GYRLPP-----PMDCPIALHQLMLDCWQKERSDRPKFGQI 263
Query: 640 FVTLSKI 646
L K+
Sbjct: 264 VNMLDKL 270
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 61/320 (19%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---------------DD 391
P + A E +T+ + ++ GSF G VY G KG ++
Sbjct: 17 PDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTVNE 65
Query: 392 AAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
AA + + +E +++K+ N +++RL G T ++ E G L +L S R
Sbjct: 66 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA 125
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
++N + + +Q+A ++A+ + YL+ +VH++L N ++ + KI +F
Sbjct: 126 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 182
Query: 507 GLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D + +GG GL R +M+PE +++GV T DV++FGVV+ E+ +
Sbjct: 183 GMTRDIYETDYYRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
Query: 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625
AE Y +S + LR ++ L ++ P + + +L + C
Sbjct: 236 -----------LAEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLFELMRMC 276
Query: 626 TAHDLNARPSISEVFVTLSK 645
++ RPS E+ ++ +
Sbjct: 277 WQYNPKMRPSFLEIISSIKE 296
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 31/247 (12%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
D SE +I+ + +H NII L G ++ E+ +NG+L +L N T
Sbjct: 61 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN----DGRFTVI 116
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
Q V + + + + YL ++ YVH++L NIL+++NL K+++FG++R E D +
Sbjct: 117 QLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD--PE 171
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579
Y TR + APE I T DV+++G+V+ E++S E D + +
Sbjct: 172 AAY---TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-- 226
Query: 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
+ + +EE G+ P P+D ++ QL +C + + RP ++
Sbjct: 227 ----DVIKAIEE--------GYRLPP-----PMDCPIALHQLMLDCWQKERSDRPKFGQI 269
Query: 640 FVTLSKI 646
L K+
Sbjct: 270 VNMLDKL 276
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVS-----SEINI 407
ES+ L K K+ G F G V+ G + AVK +K G +S E N+
Sbjct: 12 ESIKLVK----KLGAGQF-------GEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANL 60
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+K + H ++RL E Y++ EF G+L D+L S+ + + + +
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDE---GGKVLLPKLIDFSAQ 117
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH---EQGGYGL 524
+A + Y+ + Y+H++L+ +N+L+ +L KI +FGLAR E +E+ E + +
Sbjct: 118 IAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 174
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ T APE I G T K +V++FG+++ E+++
Sbjct: 175 KWT----------APEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 55/299 (18%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------------GDDAAVKVMKGDVSSEI 405
L +D ++ +G+F G+V +G ++ ++A +K ++ +E
Sbjct: 370 LLTLEDKELGSGNF-------GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 422
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
N+++++++ I+R+ G C E + LV E A+ G L+ +L NR+ N+ +++
Sbjct: 423 NVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELV 476
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ V+ + YL + +VH++L N+LL T AKI++FGL+++ +DE+ +
Sbjct: 477 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YK 528
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
H + APE I + K DV++FGV++ E S G++ G + E
Sbjct: 529 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------- 581
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
++ +LE+ R P M L C +D+ RP + V + L
Sbjct: 582 VTAMLEKGE-------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 627
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 103/195 (52%), Gaps = 24/195 (12%)
Query: 380 GSVYRGSFKGDDAAVKVMKGDVSS-----EINILKKINHSNIIRLSGFCVHE-GNTYLVY 433
G V G ++G+ AVK +K D ++ E +++ ++ HSN+++L G V E G Y+V
Sbjct: 207 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266
Query: 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493
E+ G+L D+L S + L ++ + DV A+ YL +VH++L N+
Sbjct: 267 EYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 320
Query: 494 LLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
L+ + AK+++FGL + A S + + G ++ T APE + + K DV
Sbjct: 321 LVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWT----------APEALREKKFSTKSDV 369
Query: 554 FAFGVVVLELLS-GR 567
++FG+++ E+ S GR
Sbjct: 370 WSFGILLWEIYSFGR 384
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 55/299 (18%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------------GDDAAVKVMKGDVSSEI 405
L +D ++ +G+F G+V +G ++ ++A +K ++ +E
Sbjct: 369 LLTLEDKELGSGNF-------GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 421
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
N+++++++ I+R+ G C E + LV E A+ G L+ +L NR+ N+ +++
Sbjct: 422 NVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELV 475
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ V+ + YL + +VH++L N+LL T AKI++FGL+++ +DE+ +
Sbjct: 476 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YK 527
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
H + APE I + K DV++FGV++ E S G++ G + E
Sbjct: 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------- 580
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
++ +LE+ R P M L C +D+ RP + V + L
Sbjct: 581 VTAMLEKGE-------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 626
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 61/320 (19%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---------------DD 391
P + A E +T+ + ++ GSF G VY G KG ++
Sbjct: 39 PDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTVNE 87
Query: 392 AAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
AA + + +E +++K+ N +++RL G T ++ E G L +L S R +
Sbjct: 88 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 147
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
+N + + +Q+A ++A+ + YL+ +VH++L N ++ + KI +F
Sbjct: 148 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 204
Query: 507 GLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D + +GG GL R +M+PE +++GV T DV++FGVV+ E+ +
Sbjct: 205 GMTRDIYETDYYRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
Query: 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625
AE Y +S + LR ++ L ++ P + + +L + C
Sbjct: 258 -----------LAEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLFELMRMC 298
Query: 626 TAHDLNARPSISEVFVTLSK 645
++ RPS E+ ++ +
Sbjct: 299 WQYNPKMRPSFLEIISSIKE 318
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVS-----SEINI 407
ES+ L K ++ G F G V+ G + AVK +K G +S E N+
Sbjct: 13 ESIKLVK----RLGAGQF-------GEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANL 61
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+K + H ++RL E Y++ E+ G+L D+L S+ + + + +
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDE---GGKVLLPKLIDFSAQ 118
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH---EQGGYGL 524
+A + Y+ + Y+H++L+ +N+L+ +L KI +FGLAR E +E+ E + +
Sbjct: 119 IAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 175
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ T APE I G T K DV++FG+++ E+++
Sbjct: 176 KWT----------APEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 45/265 (16%)
Query: 393 AVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444
A+K +K D SE +I+ + +H NIIRL G +V E+ +NG+L +
Sbjct: 81 AIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF 140
Query: 445 LHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504
L ++ Q T Q V + V + YL ++ YVH++L N+L+D+NL K++
Sbjct: 141 LRTHDGQ----FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 505 NFGLARSAESD---EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVL 561
+FGL+R E D + G + + + APE I + DV++FGVV+
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIR--------WTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 562 ELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQL 621
E+L+ E Y +++ S+V E G+ P+ P+ ++ QL
Sbjct: 246 EVLA-----------YGERPYWNMTNRDVISSVEE---GYRLPA-----PMGCPHALHQL 286
Query: 622 AKNCTAHDLNARPSISEVFVTLSKI 646
+C D RP S++ L +
Sbjct: 287 MLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 61/320 (19%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---------------DD 391
P + A E +T+ + ++ GSF G VY G KG ++
Sbjct: 7 PDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTVNE 55
Query: 392 AAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
AA + + +E +++K+ N +++RL G T ++ E G L +L S R
Sbjct: 56 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA 115
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
++N + + +Q+A ++A+ + YL+ +VH++L N ++ + KI +F
Sbjct: 116 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 172
Query: 507 GLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D + +GG GL R +M+PE +++GV T DV++FGVV+ E+ +
Sbjct: 173 GMTRDIYETDYYRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
Query: 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625
AE Y +S + LR ++ L ++ P + + +L + C
Sbjct: 226 -----------LAEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLFELMRMC 266
Query: 626 TAHDLNARPSISEVFVTLSK 645
++ RPS E+ ++ +
Sbjct: 267 WQYNPKMRPSFLEIISSIKE 286
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 137/300 (45%), Gaps = 63/300 (21%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 31 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ + +V ++ + +L LH+ + K+ + IA A ++YLH
Sbjct: 83 LLFMGYST-KPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLH 137
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA--RSAESDEHEQGGYGLQLTRHVVGTY 534
+ +H++LK++NI L + KI +FGLA +S S H+ + G+
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ--------FEQLSGSI 186
Query: 535 GYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591
+MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI------ 228
Query: 592 SNVREKL-----RGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
N R+++ RG + P L ++ + M +L C + RPS + + ++
Sbjct: 229 -NNRDQIIEMVGRGSLSPDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 138/302 (45%), Gaps = 67/302 (22%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 19 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 70
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ + +V ++ + +L LH+ + K+ + IA A ++YLH
Sbjct: 71 LLFMGYST-KPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLH 125
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA----RSAESDEHEQGGYGLQLTRHVVG 532
+ +H++LK++NI L + KI +FGLA R + S + EQ + G
Sbjct: 126 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ----------LSG 172
Query: 533 TYGYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589
+ +MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 173 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI---- 216
Query: 590 EESNVREKL-----RGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
N R+++ RG + P L ++ + M +L C + RPS + +
Sbjct: 217 ---NNRDQIIEMVGRGSLSPDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
Query: 645 KI 646
++
Sbjct: 273 EL 274
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 145/320 (45%), Gaps = 61/320 (19%)
Query: 347 PQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKG---------------DD 391
P + A E +T+ + ++ GSF G VY G KG ++
Sbjct: 4 PDEWEVAREKITMSR----ELGQGSF-------GMVYEGVAKGVVKDEPETRVAIKTVNE 52
Query: 392 AAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ 451
AA + + +E +++K+ N +++RL G T ++ E G L +L S R +
Sbjct: 53 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 112
Query: 452 TSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
+N + + +Q+A ++A+ + YL+ +VH++L N + + KI +F
Sbjct: 113 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDF 169
Query: 507 GLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G+ R E+D + +GG GL R +M+PE +++GV T DV++FGVV+ E+ +
Sbjct: 170 GMTRDIYETDYYRKGGKGLLPVR-------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
Query: 566 GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNC 625
AE Y +S + LR ++ L ++ P + + +L + C
Sbjct: 223 -----------LAEQPYQGLSN-------EQVLRFVMEGGLLDK-PDNCPDMLLELMRMC 263
Query: 626 TAHDLNARPSISEVFVTLSK 645
++ RPS E+ ++ +
Sbjct: 264 WQYNPKMRPSFLEIISSIKE 283
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 23/192 (11%)
Query: 380 GSVYRGSFKGDDAAVKVMKGDVSS-----EINILKKINHSNIIRLSGFCVHE-GNTYLVY 433
G V G ++G+ AVK +K D ++ E +++ ++ HSN+++L G V E G Y+V
Sbjct: 35 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94
Query: 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493
E+ G+L D+L S + L ++ + DV A+ YL +VH++L N+
Sbjct: 95 EYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 148
Query: 494 LLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
L+ + AK+++FGL + A S + + G ++ T APE + + K DV
Sbjct: 149 LVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWT----------APEALREKKFSTKSDV 197
Query: 554 FAFGVVVLELLS 565
++FG+++ E+ S
Sbjct: 198 WSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 31/208 (14%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSS-----EINILKKINHSNIIRLSG 421
I G F G V G ++G+ AVK +K D ++ E +++ ++ HSN+++L G
Sbjct: 14 IGKGEF-------GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 422 FCVHE-GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
V E G Y+V E+ G+L D+L S + L ++ + DV A+ YL
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLE---G 120
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
+VH++L N+L+ + AK+++FGL + A S + + G ++ T APE
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWT----------APE 169
Query: 541 YIENGVITPKLDVFAFGVVVLELLS-GR 567
+ + K DV++FG+++ E+ S GR
Sbjct: 170 ALREKKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 31/247 (12%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
D E +I+ + +H N++ L G +V EF +NGAL +L + Q T
Sbjct: 90 DFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ----FTVI 145
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
Q V + +A + YL + YVH++L NIL+++NL K+++FGL+R E D
Sbjct: 146 QLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPE-- 200
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579
+ T + APE I+ T DV+++G+V+ E++S E D + +
Sbjct: 201 ---AVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-- 255
Query: 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
+ + +EE G+ P+ P+D + QL +C + RP ++
Sbjct: 256 ----DVIKAIEE--------GYRLPA-----PMDCPAGLHQLMLDCWQKERAERPKFEQI 298
Query: 640 FVTLSKI 646
L K+
Sbjct: 299 VGILDKM 305
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 73/302 (24%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 43 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ + +V ++ + +L LH + + IA A ++YLH
Sbjct: 95 LLFMGYST-KPQLAIVTQWCEGSSLYHHLHI----IETKFEMIKLIDIARQTAQGMDYLH 149
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA----RSAESDEHEQGGYGLQLTRHVVG 532
+ +H++LK++NI L +L KI +FGLA R + S + EQ + G
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----------LSG 196
Query: 533 TYGYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589
+ +MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI---- 240
Query: 590 EESNVREKL-----RGFIDPSL---RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641
N R+++ RG++ P L R+ P +M +L C + RP ++
Sbjct: 241 ---NNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILA 293
Query: 642 TL 643
++
Sbjct: 294 SI 295
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 73/302 (24%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 43 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ + +V ++ + +L LH + + IA A ++YLH
Sbjct: 95 LLFMGYST-KPQLAIVTQWCEGSSLYHHLHI----IETKFEMIKLIDIARQTAQGMDYLH 149
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA----RSAESDEHEQGGYGLQLTRHVVG 532
+ +H++LK++NI L +L KI +FGLA R + S + EQ + G
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----------LSG 196
Query: 533 TYGYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589
+ +MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI---- 240
Query: 590 EESNVREKL-----RGFIDPSL---RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641
N R+++ RG++ P L R+ P +M +L C + RP ++
Sbjct: 241 ---NNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILA 293
Query: 642 TL 643
++
Sbjct: 294 SI 295
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 73/302 (24%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 42 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 93
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ + +V ++ + +L LH + + IA A ++YLH
Sbjct: 94 LLFMGYST-KPQLAIVTQWCEGSSLYHHLHI----IETKFEMIKLIDIARQTAQGMDYLH 148
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA----RSAESDEHEQGGYGLQLTRHVVG 532
+ +H++LK++NI L +L KI +FGLA R + S + EQ + G
Sbjct: 149 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----------LSG 195
Query: 533 TYGYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589
+ +MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 196 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI---- 239
Query: 590 EESNVREKL-----RGFIDPSL---RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641
N R+++ RG++ P L R+ P +M +L C + RP ++
Sbjct: 240 ---NNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILA 292
Query: 642 TL 643
++
Sbjct: 293 SI 294
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 39/262 (14%)
Query: 393 AVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444
A+K +K D SE +I+ + +H NIIRL G +V E+ +NG+L +
Sbjct: 81 AIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF 140
Query: 445 LHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504
L ++ Q T Q V + V + YL ++ YVH++L N+L+D+NL K++
Sbjct: 141 LRTHDGQ----FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELL 564
+FGL+R E D T + APE I + DV++FGVV+ E+L
Sbjct: 194 DFGLSRVLEDDPD-----AAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
Query: 565 SGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKN 624
+ E Y +++ S+V E G+ P+ P+ ++ QL +
Sbjct: 249 A-----------YGERPYWNMTNRDVISSVEE---GYRLPA-----PMGCPHALHQLMLD 289
Query: 625 CTAHDLNARPSISEVFVTLSKI 646
C D RP S++ L +
Sbjct: 290 CWHKDRAQRPRFSQIVSVLDAL 311
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 136/300 (45%), Gaps = 69/300 (23%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 20 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ + +V ++ + +L LH + + IA A ++YLH
Sbjct: 72 LLFMGYST-KPQLAIVTQWCEGSSLYHHLHI----IETKFEMIKLIDIARQTAQGMDYLH 126
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA--RSAESDEHEQGGYGLQLTRHVVGTY 534
+ +H++LK++NI L +L KI +FGLA +S S H+ + G+
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--------FEQLSGSI 175
Query: 535 GYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591
+MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI------ 217
Query: 592 SNVREKL-----RGFIDPSL---RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
N R+++ RG++ P L R+ P +M +L C + RP ++ ++
Sbjct: 218 -NNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 73/302 (24%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 35 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 86
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ + +V ++ + +L LH + + IA A ++YLH
Sbjct: 87 LLFMGYST-KPQLAIVTQWCEGSSLYHHLHI----IETKFEMIKLIDIARQTAQGMDYLH 141
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA----RSAESDEHEQGGYGLQLTRHVVG 532
+ +H++LK++NI L +L KI +FGLA R + S + EQ + G
Sbjct: 142 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----------LSG 188
Query: 533 TYGYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589
+ +MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 189 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI---- 232
Query: 590 EESNVREKL-----RGFIDPSL---RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641
N R+++ RG++ P L R+ P +M +L C + RP ++
Sbjct: 233 ---NNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILA 285
Query: 642 TL 643
++
Sbjct: 286 SI 287
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 69/301 (22%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 15 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ + +V ++ + +L LH + + IA A ++YLH
Sbjct: 67 LLFMGYST-KPQLAIVTQWCEGSSLYHHLHI----IETKFEMIKLIDIARQTAQGMDYLH 121
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA--RSAESDEHEQGGYGLQLTRHVVGTY 534
+ +H++LK++NI L +L KI +FGLA +S S H+ + G+
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--------FEQLSGSI 170
Query: 535 GYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591
+MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI------ 212
Query: 592 SNVREKL-----RGFIDPSL---RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
N R+++ RG++ P L R+ P +M +L C + RP ++ ++
Sbjct: 213 -NNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASI 267
Query: 644 S 644
Sbjct: 268 E 268
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 69/301 (22%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 15 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ + +V ++ + +L LH + + IA A ++YLH
Sbjct: 67 LLFMGYST-KPQLAIVTQWCEGSSLYHHLHI----IETKFEMIKLIDIARQTAQGMDYLH 121
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA--RSAESDEHEQGGYGLQLTRHVVGTY 534
+ +H++LK++NI L +L KI +FGLA +S S H+ + G+
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ--------FEQLSGSI 170
Query: 535 GYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591
+MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI------ 212
Query: 592 SNVREKL-----RGFIDPSL---RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
N R+++ RG++ P L R+ P +M +L C + RP ++ ++
Sbjct: 213 -NNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASI 267
Query: 644 S 644
Sbjct: 268 E 268
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 136/300 (45%), Gaps = 69/300 (23%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 20 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ + +V ++ + +L LH + + IA A ++YLH
Sbjct: 72 LLFMGYST-KPQLAIVTQWCEGSSLYHHLHI----IETKFEMIKLIDIARQTAQGMDYLH 126
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA--RSAESDEHEQGGYGLQLTRHVVGTY 534
+ +H++LK++NI L +L KI +FGLA +S S H+ + G+
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--------FEQLSGSI 175
Query: 535 GYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591
+MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI------ 217
Query: 592 SNVREKL-----RGFIDPSL---RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
N R+++ RG++ P L R+ P +M +L C + RP ++ ++
Sbjct: 218 -NNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 67/302 (22%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 31 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ +V ++ + +L LH+ + K+ + IA A ++YLH
Sbjct: 83 LLFMGYSTAP-QLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLH 137
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA----RSAESDEHEQGGYGLQLTRHVVG 532
+ +H++LK++NI L + KI +FGLA R + S + EQ + G
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ----------LSG 184
Query: 533 TYGYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589
+ +MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI---- 228
Query: 590 EESNVREKL-----RGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
N R+++ RG + P L ++ + M +L C + RPS + +
Sbjct: 229 ---NNRDQIIEMVGRGSLSPDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
Query: 645 KI 646
++
Sbjct: 285 EL 286
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 73/302 (24%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 17 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 68
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ + +V ++ + +L LH + + IA A ++YLH
Sbjct: 69 LLFMGYST-KPQLAIVTQWCEGSSLYHHLHI----IETKFEMIKLIDIARQTAQGMDYLH 123
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA----RSAESDEHEQGGYGLQLTRHVVG 532
+ +H++LK++NI L +L KI +FGLA R + S + EQ + G
Sbjct: 124 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----------LSG 170
Query: 533 TYGYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589
+ +MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 171 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI---- 214
Query: 590 EESNVREKL-----RGFIDPSL---RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641
N R+++ RG++ P L R+ P +M +L C + RP ++
Sbjct: 215 ---NNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILA 267
Query: 642 TL 643
++
Sbjct: 268 SI 269
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 42/232 (18%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGS----FKGD---DAAVKVMKGDVS----- 402
E +TL + ++ GSF G VY G+ KG+ AVK + S
Sbjct: 16 EKITLLR----ELGQGSF-------GMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 64
Query: 403 ---SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL--- 456
+E +++K +++RL G T +V E +G L +L S R + +N
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 457 --TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA-E 513
T ++ +Q+A ++A+ + YL+ +VH++L N ++ + KI +FG+ R E
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+D + +GG GL R +MAPE +++GV T D+++FGVV+ E+ S
Sbjct: 182 TDYYRKGGKGLLPVR-------WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 38/221 (17%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVSS-----EINI 407
E +TL K ++ +G F G V G +KG D AVK++K G +S E
Sbjct: 8 EEITLLK----ELGSGQF-------GVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQT 56
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+ K++H +++ G C E Y+V E+ NG L ++L S+ L Q +++ YD
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSH----GKGLEPSQLLEMCYD 112
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT 527
V + +L + ++H++L N L+D +L K+++FG+ R D++
Sbjct: 113 VCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS------- 162
Query: 528 RHVVGT---YGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
VGT + APE + K DV+AFG+++ E+ S
Sbjct: 163 ---VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 55/299 (18%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------------GDDAAVKVMKGDVSSEI 405
L +D ++ +G+F G+V +G ++ ++A +K ++ +E
Sbjct: 11 LLTLEDKELGSGNF-------GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 63
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
N+++++++ I+R+ G C E + LV E A+ G L+ +L NR+ N+ +++
Sbjct: 64 NVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELV 117
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ V+ + YL + +VH++L N+LL T AKI++FGL+++ +DE+ +
Sbjct: 118 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENX-----YK 169
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
H + APE I + K DV++FGV++ E S G++ G + E
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------- 222
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
++ +LE+ R P M L C +D+ RP + V + L
Sbjct: 223 VTAMLEKGE-------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ E+A G L ++L +
Sbjct: 123 DDATEKDL-SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 181
Query: 449 R-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 182 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE 238
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N KI +FGLAR + ++ + +L +MAPE + + V T + DV++FG
Sbjct: 239 NNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 292
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 293 VLMWEIFT 300
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 55/299 (18%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------------GDDAAVKVMKGDVSSEI 405
L +D ++ +G+F G+V +G ++ ++A +K ++ +E
Sbjct: 27 LLTLEDKELGSGNF-------GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 79
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
N+++++++ I+R+ G C E + LV E A+ G L+ +L NR+ N+ +++
Sbjct: 80 NVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELV 133
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ V+ + YL + +VH++L N+LL T AKI++FGL+++ +DE+ +
Sbjct: 134 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YK 185
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
H + APE I + K DV++FGV++ E S G++ G + E
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------- 238
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
++ +LE+ R P M L C +D+ RP + V + L
Sbjct: 239 VTAMLEKGE-------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 55/299 (18%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------------GDDAAVKVMKGDVSSEI 405
L +D ++ +G+F G+V +G ++ ++A +K ++ +E
Sbjct: 27 LLTLEDKELGSGNF-------GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 79
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
N+++++++ I+R+ G C E + LV E A+ G L+ +L NR+ N+ +++
Sbjct: 80 NVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELV 133
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ V+ + YL + +VH++L N+LL T AKI++FGL+++ +DE+ +
Sbjct: 134 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YK 185
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
H + APE I + K DV++FGV++ E S G++ G + E
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------- 238
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
++ +LE+ R P M L C +D+ RP + V + L
Sbjct: 239 VTAMLEKGE-------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 55/299 (18%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------------GDDAAVKVMKGDVSSEI 405
L +D ++ +G+F G+V +G ++ ++A +K ++ +E
Sbjct: 25 LLTLEDKELGSGNF-------GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 77
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
N+++++++ I+R+ G C E + LV E A+ G L+ +L NR+ N+ +++
Sbjct: 78 NVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELV 131
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ V+ + YL + +VH++L N+LL T AKI++FGL+++ +DE+ +
Sbjct: 132 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YK 183
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
H + APE I + K DV++FGV++ E S G++ G + E
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------- 236
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
++ +LE+ R P M L C +D+ RP + V + L
Sbjct: 237 VTAMLEKGE-------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 282
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 22/192 (11%)
Query: 384 RGSFKGDDAAVKVMK--------GDVSSEINILKKINHSNIIRLSGFCVHEGN--TYLVY 433
G G+ AVK +K D+ EI IL+ + H NI++ G C +G L+
Sbjct: 45 EGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104
Query: 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493
EF +G+L ++L N+ + + KQ+++ A + ++YL + YVH++L N+
Sbjct: 105 EFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNV 157
Query: 494 LLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
L+++ + KI +FGL ++ E+D+ + + APE + DV
Sbjct: 158 LVESEHQVKIGDFGLTKAIETDKEXX-----TVKDDRDSPVFWYAPECLMQSKFYIASDV 212
Query: 554 FAFGVVVLELLS 565
++FGV + ELL+
Sbjct: 213 WSFGVTLHELLT 224
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 47/303 (15%)
Query: 362 FQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK-GDVSS-----EINILKKINHSN 415
FQ + + R G V++ + AVK+ D S E+ L + H N
Sbjct: 21 FQSMPLQLLEVKARGRF-GCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHEN 79
Query: 416 IIRLSGFCVHEGNT-----YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
I++ G G + +L+ F + G+LSD+L +N ++W + IA +A
Sbjct: 80 ILQFIG-AEKRGTSVDVDLWLITAFHEKGSLSDFLKANV------VSWNELCHIAETMAR 132
Query: 471 ALNYLHKYT-------NPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYG 523
L YLH+ P H+++K+ N+LL NL A I +FGLA E+ + +G
Sbjct: 133 GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHG 192
Query: 524 LQLTRHVVGTYGYMAPEYIENGV-----ITPKLDVFAFGVVVLELLSGREAVTGDQN--- 575
VGT YMAPE +E + ++D++A G+V+ EL S A G +
Sbjct: 193 ------QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246
Query: 576 --CEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSM-AQLAKNCTAHDLNA 632
E E+ ++E V +K R P LR+ + +M + + C HD A
Sbjct: 247 LPFEEEIGQHPSLEDMQEVVVHKKKR----PVLRDYWQKHAGMAMLCETIEECWDHDAEA 302
Query: 633 RPS 635
R S
Sbjct: 303 RLS 305
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 234 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293
Query: 432 VYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+ EF G L D+L NR + S + + +A +++A+ YL K ++H+NL
Sbjct: 294 ITEFMTYGNLLDYLRECNRQEVSAVVL----LYMATQISSAMEYLEKKN---FIHRNLAA 346
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVIT 548
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 347 RNCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFS 397
Query: 549 PKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLR 607
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYR 437
Query: 608 NEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 392 AAVKVMKGDVS--------SEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALS 442
AVK++K D + SE+ ++K I H NII L G C +G Y++ E+A G L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 443 DWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
++L + R + + L+ K V AY VA + YL + +H++L
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 164
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL 551
N+L+ + KI +FGLAR D H Y + T + +MAPE + + + T +
Sbjct: 165 NVLVTEDNVMKIADFGLAR----DIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQS 218
Query: 552 DVFAFGVVVLELLS 565
DV++FGV++ E+ +
Sbjct: 219 DVWSFGVLLWEIFT 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 392 AAVKVMKGDVS--------SEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALS 442
AVK++K D + SE+ ++K I H NII L G C +G Y++ E+A G L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 443 DWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
++L + R + + L+ K V AY VA + YL + +H++L
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL 551
N+L+ + KI +FGLAR D H Y + T + +MAPE + + + T +
Sbjct: 180 NVLVTEDNVMKIADFGLAR----DIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 552 DVFAFGVVVLELLS 565
DV++FGV++ E+ +
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 22/192 (11%)
Query: 384 RGSFKGDDAAVKVMK--------GDVSSEINILKKINHSNIIRLSGFCVHEGN--TYLVY 433
G G+ AVK +K D+ EI IL+ + H NI++ G C +G L+
Sbjct: 33 EGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 92
Query: 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493
EF +G+L ++L N+ + + KQ+++ A + ++YL + YVH++L N+
Sbjct: 93 EFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNV 145
Query: 494 LLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
L+++ + KI +FGL ++ E+D+ + + APE + DV
Sbjct: 146 LVESEHQVKIGDFGLTKAIETDKEXX-----TVKDDRDSPVFWYAPECLMQSKFYIASDV 200
Query: 554 FAFGVVVLELLS 565
++FGV + ELL+
Sbjct: 201 WSFGVTLHELLT 212
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 392 AAVKVMKGDVS--------SEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALS 442
AVK++K D + SE+ ++K I H NII L G C +G Y++ E+A G L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 443 DWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
++L + R + + L+ K V AY VA + YL + +H++L
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 168
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL 551
N+L+ + KI +FGLAR D H Y + T + +MAPE + + + T +
Sbjct: 169 NVLVTEDNVMKIADFGLAR----DIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQS 222
Query: 552 DVFAFGVVVLELLS 565
DV++FGV++ E+ +
Sbjct: 223 DVWSFGVLLWEIFT 236
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 69/301 (22%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNI 416
+I +GSF G+VY+G + GD AVK++ +E+ +L+K H NI
Sbjct: 15 RIGSGSF-------GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+ G+ +V ++ + +L LH + + IA A ++YLH
Sbjct: 67 LLFMGYST-APQLAIVTQWCEGSSLYHHLHI----IETKFEMIKLIDIARQTAQGMDYLH 121
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA--RSAESDEHEQGGYGLQLTRHVVGTY 534
+ +H++LK++NI L +L KI +FGLA +S S H+ + G+
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--------FEQLSGSI 170
Query: 535 GYMAPEYIENGVITP---KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEE 591
+MAPE I P + DV+AFG+V+ EL++G +L Y++I
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG------------QLPYSNI------ 212
Query: 592 SNVREKL-----RGFIDPSL---RNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
N R+++ RG++ P L R+ P +M +L C + RP ++ ++
Sbjct: 213 -NNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASI 267
Query: 644 S 644
Sbjct: 268 E 268
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 392 AAVKVMKGDVS--------SEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALS 442
AVK++K D + SE+ ++K I H NII L G C +G Y++ E+A G L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 443 DWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
++L + R + + L+ K V AY VA + YL + +H++L
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 172
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL 551
N+L+ + KI +FGLAR D H Y + T + +MAPE + + + T +
Sbjct: 173 NVLVTEDNVMKIADFGLAR----DIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQS 226
Query: 552 DVFAFGVVVLELLS 565
DV++FGV++ E+ +
Sbjct: 227 DVWSFGVLLWEIFT 240
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 129/295 (43%), Gaps = 65/295 (22%)
Query: 380 GSVYRGSFKGDDAAVKVM----KGDVSSEINILKK--INHSNIIRLSGFCVHEGNT---- 429
G V++ D AVK+ K SE I + H N+++ N
Sbjct: 29 GCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVEL 88
Query: 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT--------NP 481
+L+ F D G+L+D+L N +TW + +A ++ L+YLH+ P
Sbjct: 89 WLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKP 142
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAE-----SDEHEQGGYGLQLTRHVVGTYGY 536
H++ K+ N+LL ++L A + +FGLA E D H Q VGT Y
Sbjct: 143 SIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-----------VGTRRY 191
Query: 537 MAPEYIENGV-----ITPKLDVFAFGVVVLELLSGREAVTGDQN-----CEAELLYASIS 586
MAPE +E + ++D++A G+V+ EL+S +A G + E E+
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSL 251
Query: 587 RVLEESNVREKLRGFIDPSLRNEY---PLDLAFSMAQLA---KNCTAHDLNARPS 635
L+E V +K+R P++++ + P +AQL + C HD AR S
Sbjct: 252 EELQEVVVHKKMR----PTIKDHWLKHP-----GLAQLCVTIEECWDHDAEARLS 297
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 392 AAVKVMKGDVS--------SEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALS 442
AVK++K D + SE+ ++K I H NII L G C +G Y++ E+A G L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 443 DWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
++L + R + + L+ K V AY VA + YL + +H++L
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 171
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL 551
N+L+ + KI +FGLAR D H Y + T + +MAPE + + + T +
Sbjct: 172 NVLVTEDNVMKIADFGLAR----DIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQS 225
Query: 552 DVFAFGVVVLELLS 565
DV++FGV++ E+ +
Sbjct: 226 DVWSFGVLLWEIFT 239
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 55/299 (18%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------------GDDAAVKVMKGDVSSEI 405
L +D ++ +G+F G+V +G ++ ++A +K ++ +E
Sbjct: 11 LLTLEDKELGSGNF-------GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 63
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
N+++++++ I+R+ G C E + LV E A+ G L+ +L NR+ N+ +++
Sbjct: 64 NVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELV 117
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ V+ + YL + +VH++L N+LL T AKI++FGL+++ +DE+ +
Sbjct: 118 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YK 169
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
H + APE I + K DV++FGV++ E S G++ G + E
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------- 222
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
++ +LE+ R P M L C +D+ RP + V + L
Sbjct: 223 VTAMLEKGE-------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 55/299 (18%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------------GDDAAVKVMKGDVSSEI 405
L +D ++ +G+F G+V +G ++ ++A +K ++ +E
Sbjct: 5 LLTLEDKELGSGNF-------GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 57
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
N+++++++ I+R+ G C E + LV E A+ G L+ +L NR+ N+ +++
Sbjct: 58 NVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELV 111
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ V+ + YL + +VH++L N+LL T AKI++FGL+++ +DE+ +
Sbjct: 112 HQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YK 163
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
H + APE I + K DV++FGV++ E S G++ G + E
Sbjct: 164 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------- 216
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
++ +LE+ R P M L C +D+ RP + V + L
Sbjct: 217 VTAMLEKGE-------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 262
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ E+A G L ++L +
Sbjct: 66 DDATEKDL-SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 124
Query: 449 R-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R Y + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 125 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE 181
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N KI +FGLAR + ++ + +L +MAPE + + V T + DV++FG
Sbjct: 182 NNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 235
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 236 VLMWEIFT 243
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 392 AAVKVMKGDVS--------SEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALS 442
AVK++K D + SE+ ++K I H NII L G C +G Y++ E+A G L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 443 DWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
++L + R + + L+ K V AY VA + YL + +H++L
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL 551
N+L+ + KI +FGLAR D H Y + T + +MAPE + + + T +
Sbjct: 180 NVLVTEDNVMKIADFGLAR----DIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 552 DVFAFGVVVLELLS 565
DV++FGV++ E+ +
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 29/194 (14%)
Query: 392 AAVKVMKGDVS--------SEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALS 442
AVK++K D + SE+ ++K I H NII L G C +G Y++ E+A G L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 443 DWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
++L + R + + L+ K V AY VA + YL + +H++L
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL 551
N+L+ + KI +FGLAR + + +L +MAPE + + + T +
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRL------PVKWMAPEALFDRIYTHQS 233
Query: 552 DVFAFGVVVLELLS 565
DV++FGV++ E+ +
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ E+A G L ++L +
Sbjct: 77 DDATEKDL-SDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 449 R-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R Y + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE 192
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N KI +FGLAR + ++ + +L +MAPE + + V T + DV++FG
Sbjct: 193 NNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ E+A G L ++L +
Sbjct: 69 DDATEKDL-SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 127
Query: 449 R-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R Y + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 128 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE 184
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N KI +FGLAR + ++ + +L +MAPE + + V T + DV++FG
Sbjct: 185 NNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 238
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 239 VLMWEIFT 246
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 432 VYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+ EF G L D+L NR + S + + +A +++A+ YL K ++H++L
Sbjct: 87 IIEFMTYGNLLDYLRECNRQEVSAVVL----LYMATQISSAMEYLEKKN---FIHRDLAA 139
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVIT 548
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFS 190
Query: 549 PKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLR 607
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYR 230
Query: 608 NEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 432 VYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+ EF G L D+L NR + S + + +A +++A+ YL K ++H++L
Sbjct: 87 IIEFMTYGNLLDYLRECNRQEVSAVVL----LYMATQISSAMEYLEKKN---FIHRDLAA 139
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVIT 548
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFS 190
Query: 549 PKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLR 607
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYR 230
Query: 608 NEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 432 VYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+ EF G L D+L NR + S + + +A +++A+ YL K ++H++L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVSAVVL----LYMATQISSAMEYLEKKN---FIHRDLAA 144
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVIT 548
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFS 195
Query: 549 PKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLR 607
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYR 235
Query: 608 NEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ E+A G L ++L +
Sbjct: 64 DDATEKDL-SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 122
Query: 449 R-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R Y + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 123 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTE 179
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N KI +FGLAR + ++ + +L +MAPE + + V T + DV++FG
Sbjct: 180 NNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 233
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 234 VLMWEIFT 241
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 55/299 (18%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------------GDDAAVKVMKGDVSSEI 405
L +D ++ +G+F G+V +G ++ ++A +K ++ +E
Sbjct: 7 LLTLEDKELGSGNF-------GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 59
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
N+++++++ I+R+ G C E + LV E A+ G L+ +L NR+ N+ +++
Sbjct: 60 NVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELV 113
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ V+ + YL + +VH++L N+LL T AKI++FGL+++ +DE+ +
Sbjct: 114 HQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YK 165
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
H + APE I + K DV++FGV++ E S G++ G + E
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------- 218
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
++ +LE+ R P M L C +D+ RP + V + L
Sbjct: 219 VTAMLEKGE-------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 264
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 55/299 (18%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-------------GDDAAVKVMKGDVSSEI 405
L +D ++ +G+F G+V +G ++ ++A +K ++ +E
Sbjct: 17 LLTLEDKELGSGNF-------GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 69
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
N+++++++ I+R+ G C E + LV E A+ G L+ +L NR+ N+ +++
Sbjct: 70 NVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELV 123
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ V+ + YL + +VH++L N+LL T AKI++FGL+++ +DE+ +
Sbjct: 124 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YK 175
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
H + APE I + K DV++FGV++ E S G++ G + E
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------- 228
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
++ +LE+ R P M L C +D+ RP + V + L
Sbjct: 229 VTAMLEKGE-------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 274
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 92 IIEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 145
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 236
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 432 VYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+ EF G L D+L NR + S + + +A +++A+ YL K ++H++L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVL----LYMATQISSAMEYLEKKN---FIHRDLAA 139
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVIT 548
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFS 190
Query: 549 PKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLR 607
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYR 230
Query: 608 NEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 432 VYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+ EF G L D+L NR + S + + +A +++A+ YL K ++H++L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVL----LYMATQISSAMEYLEKKN---FIHRDLAA 139
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVIT 548
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFS 190
Query: 549 PKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLR 607
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYR 230
Query: 608 NEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ E+A G L ++L +
Sbjct: 77 DDATEKDL-SDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 449 R-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R Y + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE 192
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N KI +FGLAR + ++ + +L +MAPE + + V T + DV++FG
Sbjct: 193 NNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ E+A G L ++L +
Sbjct: 77 DDATEKDL-SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 449 R-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R Y + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE 192
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N KI +FGLAR + ++ + +L +MAPE + + V T + DV++FG
Sbjct: 193 NNVMKIADFGLARDINNIDYYKNTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 49/253 (19%)
Query: 391 DAAVKVMKGDVSS----------EINILKKINHSNIIRLSGFCVHEGNT------YLVYE 434
D AVKV++ D++ E +NH I+ + + E T Y+V E
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVME 96
Query: 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
+ D L D +H T +T K+ +++ D ALN+ H+ +H+++K +NI+
Sbjct: 97 YVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 495 LDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
+ K+ +FG+AR+ A+S G + T V+GT Y++PE + + DV
Sbjct: 149 ISATNAVKVMDFGIARAIADS------GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 554 FAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNE-YPL 612
++ G V+ E+L+G TGD + +VRE I PS R+E
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPVS-----------VAYQHVREDP---IPPSARHEGLSA 248
Query: 613 DL-AFSMAQLAKN 624
DL A + LAKN
Sbjct: 249 DLDAVVLKALAKN 261
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 122/251 (48%), Gaps = 45/251 (17%)
Query: 336 LFPQASNSLSHPQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGS----FKGD- 390
+FP +S+ P + + E +TL + ++ GSF G VY G+ KG+
Sbjct: 1 VFP---SSVFVPDEWEVSREKITLLR----ELGQGSF-------GMVYEGNARDIIKGEA 46
Query: 391 --DAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGA 440
AVK + S +E +++K +++RL G T +V E +G
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 441 LSDWLHSNRYQTSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL 495
L +L S R + +N T ++ +Q+A ++A+ + YL+ +VH++L N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMV 163
Query: 496 DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554
+ KI +FG+ R E+ + +GG GL R +MAPE +++GV T D++
Sbjct: 164 AHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR-------WMAPESLKDGVFTTSSDMW 216
Query: 555 AFGVVVLELLS 565
+FGVV+ E+ S
Sbjct: 217 SFGVVLWEITS 227
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 140/325 (43%), Gaps = 60/325 (18%)
Query: 348 QGFRSAVESLTLYKFQDLKIATGSFSEEN-----RIQGSVYRGSF-------------KG 389
QG R+ V+ T F+D A F++E +I+ + G F +
Sbjct: 1 QGVRTFVDPFT---FEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKRE 57
Query: 390 DDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGAL 441
A+K +K D SE +I+ + +H NII L G ++ E+ +NG+L
Sbjct: 58 ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 117
Query: 442 SDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA 501
+L N T Q V + + + + YL + VH++L NIL+++NL
Sbjct: 118 DAFLRKN----DGRFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVC 170
Query: 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVL 561
K+++FG++R E D + Y TR + APE I T DV+++G+V+
Sbjct: 171 KVSDFGMSRVLEDD--PEAAY---TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMW 225
Query: 562 ELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQL 621
E++S E D + + + + +EE G+ P P+D ++ QL
Sbjct: 226 EVMSYGERPYWDMSNQ------DVIKAIEE--------GYRLPP-----PMDCPIALHQL 266
Query: 622 AKNCTAHDLNARPSISEVFVTLSKI 646
+C + + RP ++ L K+
Sbjct: 267 MLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 392 AAVKVMKGDVS--------SEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALS 442
AVK++K D + SE+ ++K I H NII L G C +G Y++ E+A G L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 443 DWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
++L + R + + L+ K V AY VA + YL + +H++L
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 220
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL 551
N+L+ + KI +FGLAR D H Y + T + +MAPE + + + T +
Sbjct: 221 NVLVTEDNVMKIADFGLAR----DIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQS 274
Query: 552 DVFAFGVVVLELLS 565
DV++FGV++ E+ +
Sbjct: 275 DVWSFGVLLWEIFT 288
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ E+A G L ++L +
Sbjct: 77 DDATEKDL-SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 449 R-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R Y + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 136 RPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE 192
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N KI +FGLAR + + + +L +MAPE + + V T + DV++FG
Sbjct: 193 NNVMKIADFGLARDINNIDXXKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 145
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 236
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 273 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 332
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H+NL
Sbjct: 333 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRNLAAR 386
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 387 NCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 438 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 477
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 478 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 33/200 (16%)
Query: 391 DAAVKVMKGDVSS----------EINILKKINHSNIIRLSGFCVHEGNT------YLVYE 434
D AVKV++ D++ E +NH I+ + + E T Y+V E
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVME 96
Query: 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
+ D L D +H T +T K+ +++ D ALN+ H+ +H+++K +NIL
Sbjct: 97 YVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIL 148
Query: 495 LDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
+ K+ +FG+AR+ A+S G + T V+GT Y++PE + + DV
Sbjct: 149 ISATNAVKVVDFGIARAIADS------GNSVXQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 554 FAFGVVVLELLSGREAVTGD 573
++ G V+ E+L+G TGD
Sbjct: 203 YSLGCVLYEVLTGEPPFTGD 222
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 231 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 290
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H+NL
Sbjct: 291 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRNLAAR 344
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 345 NCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 396 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 435
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 436 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ E+A G L ++L +
Sbjct: 77 DDATEKDL-SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 449 R-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R Y + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE 192
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N KI +FGLAR + + + +L +MAPE + + V T + DV++FG
Sbjct: 193 NNVMKIADFGLARDINNIDXXKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 134/307 (43%), Gaps = 55/307 (17%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG--------DVSSEINILKKINHSNIIR 418
+ G F + + +G AVK++K D+ SE N+LK++NH ++I+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHSNR-------------------YQTSDNLTWK 459
L G C +G L+ E+A G+L +L +R + LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
+ A+ ++ + YL + VH++L NIL+ + KI++FGL+R D +E+
Sbjct: 151 DLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579
Y + + +MA E + + + T + DV++FGV++ E+++ + G+
Sbjct: 204 DSYVKRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGNP----- 252
Query: 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
Y I E+L + R E P + + M +L C + + RP +++
Sbjct: 253 --YPGIP--------PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Query: 640 FVTLSKI 646
L K+
Sbjct: 303 SKDLEKM 309
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 31 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 144
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 145 NCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 196 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 235
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 236 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 140
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 231
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 119/272 (43%), Gaps = 48/272 (17%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 432 VYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+ EF G L D+L NR + S + + +A +++A+ YL K ++H++L
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAVVL----LYMATQISSAMEYLEKKN---FIHRDLAA 137
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVIT 548
N L+ N K+ +FGL+R D T H + + APE + +
Sbjct: 138 RNCLVGENHLVKVADFGLSRLMTGD---------TFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 549 PKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLR 607
K DV+AFGV++ E+ + G G ++ S V E ++ R
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPG----------------IDPSQVYE----LLEKDYR 228
Query: 608 NEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 140
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 231
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 392 AAVKVMKGDVS--------SEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALS 442
AVK++K D + SE+ ++K I H NII L G C +G Y++ E+A G L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 443 DWLHSNR-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
++L + R Y + +T+K V Y +A + YL + +H++L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL 551
N+L+ N KI +FGLAR + ++ + +L +MAPE + + V T +
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQS 240
Query: 552 DVFAFGVVVLELLS 565
DV++FGV++ E+ +
Sbjct: 241 DVWSFGVLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ E+A G L ++L +
Sbjct: 77 DDATEKDL-SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 449 R-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R Y + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE 192
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N +I +FGLAR + ++ + +L +MAPE + + V T + DV++FG
Sbjct: 193 NNVMRIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 145
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 236
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 119/272 (43%), Gaps = 48/272 (17%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 432 VYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+ EF G L D+L NR + S + + +A +++A+ YL K ++H++L
Sbjct: 85 IIEFMTYGNLLDYLRECNRQEVSAVVL----LYMATQISSAMEYLEKKN---FIHRDLAA 137
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVIT 548
N L+ N K+ +FGL+R D T H + + APE + +
Sbjct: 138 RNCLVGENHLVKVADFGLSRLMTGD---------TXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 549 PKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLR 607
K DV+AFGV++ E+ + G G ++ S V E ++ R
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPG----------------IDPSQVYE----LLEKDYR 228
Query: 608 NEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 133/308 (43%), Gaps = 57/308 (18%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG--------DVSSEINILKKINHSNIIR 418
+ G F + + +G AVK++K D+ SE N+LK++NH ++I+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHSNR-------------------YQTSDNLTWK 459
L G C +G L+ E+A G+L +L +R + LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA-ESDEHE 518
+ A+ ++ + YL + + VH++L NIL+ + KI++FGL+R E D
Sbjct: 151 DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578
+ G + +MA E + + + T + DV++FGV++ E+++ + G+
Sbjct: 208 KRSQGRIPVK-------WMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGNP---- 252
Query: 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638
Y I E+L + R E P + + M +L C + + RP ++
Sbjct: 253 ---YPGIP--------PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFAD 301
Query: 639 VFVTLSKI 646
+ L K+
Sbjct: 302 ISKDLEKM 309
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 88 IIEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 141
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D T H + + APE + +
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGD---------TXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 232
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 233 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 40 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 99
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 100 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 153
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 154 NCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 205 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 244
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 245 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 142
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 233
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 120/291 (41%), Gaps = 49/291 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKV----------MKGDVSSEINILKKINHSN 415
+I G+F G V+ G + D+ V V +K E ILK+ +H N
Sbjct: 121 QIGRGNF-------GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
I+RL G C + Y+V E G +L + L K +Q+ D A + YL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYL 229
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
+H++L N L+ KI++FG++R E+D GL R V
Sbjct: 230 ESKCC---IHRDLAARNCLVTEKNVLKISDFGMSRE-EADGVXAASGGL---RQV--PVK 280
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ APE + G + + DV++FG+++ E S L AS L R
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFS---------------LGASPYPNLSNQQTR 325
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E F++ R P ++ +L + C A++ RPS S ++ L I
Sbjct: 326 E----FVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 142
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 233
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 33/200 (16%)
Query: 391 DAAVKVMKGDVSS----------EINILKKINHSNIIRLSGFCVHEGNT------YLVYE 434
D AVKV++ D++ E +NH I+ + + E T Y+V E
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVME 96
Query: 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
+ D L D +H T +T K+ +++ D ALN+ H+ +H+++K +NI+
Sbjct: 97 YVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 495 LDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
+ K+ +FG+AR+ A+S G + T V+GT Y++PE + + DV
Sbjct: 149 ISATNAVKVMDFGIARAIADS------GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 554 FAFGVVVLELLSGREAVTGD 573
++ G V+ E+L+G TGD
Sbjct: 203 YSLGCVLYEVLTGEPPFTGD 222
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 55/286 (19%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNII 417
K+ G F G VY G +K AVK +K D E ++K+I H N++
Sbjct: 18 KLGGGQF-------GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLH 476
+L G C E Y++ EF G L D+L NR + S + + +A +++A+ YL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL----LYMATQISSAMEYLE 126
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY-- 534
K ++H++L N L+ N K+ +FGL+R D T H +
Sbjct: 127 KKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---------TXTAHAGAKFPI 174
Query: 535 GYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESN 593
+ APE + + K DV+AFGV++ E+ + G G ++ S
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----------------IDPSQ 218
Query: 594 VREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
V E ++ R E P + +L + C + + RPS +E+
Sbjct: 219 VYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 46/271 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 145
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVITP 549
N L+ N K+ +FGL+R D T H + + APE + +
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGD---------TXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 550 KLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRN 608
K DV+AFGV++ E+ + G G +S+V E ++ R
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRM 236
Query: 609 EYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
E P + +L + C + + RPS +E+
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 49/253 (19%)
Query: 391 DAAVKVMKGDVSS----------EINILKKINHSNIIRLSGFCVHEGNT------YLVYE 434
D AVKV++ D++ E +NH I+ + + E T Y+V E
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVME 96
Query: 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
+ D L D +H T +T K+ +++ D ALN+ H+ +H+++K +NI+
Sbjct: 97 YVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 495 LDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
+ K+ +FG+AR+ A+S G + T V+GT Y++PE + + DV
Sbjct: 149 ISATNAVKVMDFGIARAIADS------GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 554 FAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNE-YPL 612
++ G V+ E+L+G TGD + +VRE I PS R+E
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPVS-----------VAYQHVREDP---IPPSARHEGLSA 248
Query: 613 DL-AFSMAQLAKN 624
DL A + LAKN
Sbjct: 249 DLDAVVLKALAKN 261
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 113/252 (44%), Gaps = 47/252 (18%)
Query: 391 DAAVKVMKGDVSS----------EINILKKINHSNIIRLSGFCVHEGNT------YLVYE 434
D AVKV++ D++ E +NH I+ + + E T Y+V E
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVME 96
Query: 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
+ D L D +H T +T K+ +++ D ALN+ H+ +H+++K +NI+
Sbjct: 97 YVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 495 LDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554
+ K+ +FG+AR+ G + T V+GT Y++PE + + DV+
Sbjct: 149 ISATNAVKVMDFGIARAIA-----DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 555 AFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNE-YPLD 613
+ G V+ E+L+G TGD + +VRE I PS R+E D
Sbjct: 204 SLGCVLYEVLTGEPPFTGDSPVS-----------VAYQHVREDP---IPPSARHEGLSAD 249
Query: 614 L-AFSMAQLAKN 624
L A + LAKN
Sbjct: 250 LDAVVLKALAKN 261
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 132/308 (42%), Gaps = 57/308 (18%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG--------DVSSEINILKKINHSNIIR 418
+ G F + + +G AVK++K D+ SE N+LK++NH ++I+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHSNR-------------------YQTSDNLTWK 459
L G C +G L+ E+A G+L +L +R + LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA-ESDEHE 518
+ A+ ++ + YL + VH++L NIL+ + KI++FGL+R E D
Sbjct: 151 DLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578
+ G + +MA E + + + T + DV++FGV++ E+++ + G+
Sbjct: 208 KRSQGRIPVK-------WMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGNP---- 252
Query: 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638
Y I E+L + R E P + + M +L C + + RP ++
Sbjct: 253 ---YPGIP--------PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFAD 301
Query: 639 VFVTLSKI 646
+ L K+
Sbjct: 302 ISKDLEKM 309
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 29/194 (14%)
Query: 392 AAVKVMKGDVS--------SEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALS 442
AVK++K D + SE+ ++K I H NII L G C +G Y++ E+A G L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 443 DWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
++L + + + L+ K V AY VA + YL + +H++L
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL 551
N+L+ + KI +FGLAR D H Y + T + +MAPE + + + T +
Sbjct: 180 NVLVTEDNVMKIADFGLAR----DIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 552 DVFAFGVVVLELLS 565
DV++FGV++ E+ +
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 117/234 (50%), Gaps = 33/234 (14%)
Query: 350 FRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGD--------V 401
F+ ++ L ++K K+ +G+F + + ++ R S G + +K + D +
Sbjct: 16 FQGTIDDLFIFK---RKLGSGAFGDVHLVEE---RSS--GLERVIKTINKDRSQVPMEQI 67
Query: 402 SSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQR 461
+EI +LK ++H NII++ N Y+V E + G L + + S + + L+
Sbjct: 68 EAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQAR-GKALSEGYV 126
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL-DTNLRA--KITNFGLARSAESDEHE 518
++ + NAL Y H + VHK+LK NIL DT+ + KI +FGLA +SDEH
Sbjct: 127 AELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH- 182
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+ + GT YMAPE + V T K D+++ GVV+ LL+G TG
Sbjct: 183 --------STNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPFTG 227
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 120/291 (41%), Gaps = 49/291 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKV----------MKGDVSSEINILKKINHSN 415
+I G+F G V+ G + D+ V V +K E ILK+ +H N
Sbjct: 121 QIGRGNF-------GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
I+RL G C + Y+V E G +L + L K +Q+ D A + YL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYL 229
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
+H++L N L+ KI++FG++R E+D GL R V
Sbjct: 230 ESKCC---IHRDLAARNCLVTEKNVLKISDFGMSRE-EADGVYAASGGL---RQV--PVK 280
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVR 595
+ APE + G + + DV++FG+++ E S L AS L R
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFS---------------LGASPYPNLSNQQTR 325
Query: 596 EKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E F++ R P ++ +L + C A++ RPS S ++ L I
Sbjct: 326 E----FVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 34/230 (14%)
Query: 361 KFQDLKI-ATGSFSEE---NRIQGSVYRGSFKGDDAAVKVMKG---------DVSSEINI 407
+F+ LK+ GSF + +I GS R + A+KV+K E +I
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLY-----AMKVLKKATLKVRDRVRTKMERDI 79
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
L ++NH I++L EG YL+ +F G L L T +++ + +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAE 134
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT 527
+A AL++LH ++++LK NILLD K+T+FGL S ES +HE+ Y
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGL--SKESIDHEKKAYSF--- 186
Query: 528 RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
GT YMAPE + T D ++FGV++ E+L+G G E
Sbjct: 187 ---CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 233
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 58/305 (19%)
Query: 356 SLTLYKFQDLKI----ATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSS-----EIN 406
SL + ++++++ G+F G V + ++ D A+K ++ + E+
Sbjct: 2 SLHMIDYKEIEVEEVVGRGAF-------GVVCKAKWRAKDVAIKQIESESERKAFIVELR 54
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR----YQTSDNLTWKQRV 462
L ++NH NI++L G C++ LV E+A+ G+L + LH Y + ++W
Sbjct: 55 QLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW---- 108
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGG 521
+ + YLH +H++LK N+LL KI +FG A ++
Sbjct: 109 --CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT------- 159
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELL 581
+T + G+ +MAPE E + K DVF++G+++ E+++ R+ ++
Sbjct: 160 ---HMTNNK-GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 215
Query: 582 YASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641
+A + G P ++N L + L C + D + RPS+ E+
Sbjct: 216 WAVHN-------------GTRPPLIKN-----LPKPIESLMTRCWSKDPSQRPSMEEIVK 257
Query: 642 TLSKI 646
++ +
Sbjct: 258 IMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 58/305 (19%)
Query: 356 SLTLYKFQDLKI----ATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSS-----EIN 406
SL + ++++++ G+F G V + ++ D A+K ++ + E+
Sbjct: 1 SLHMIDYKEIEVEEVVGRGAF-------GVVCKAKWRAKDVAIKQIESESERKAFIVELR 53
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR----YQTSDNLTWKQRV 462
L ++NH NI++L G C++ LV E+A+ G+L + LH Y + ++W
Sbjct: 54 QLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW---- 107
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGG 521
+ + YLH +H++LK N+LL KI +FG A ++
Sbjct: 108 --CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT------- 158
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELL 581
+T + G+ +MAPE E + K DVF++G+++ E+++ R+ ++
Sbjct: 159 ---HMTNNK-GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 214
Query: 582 YASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFV 641
+A + G P ++N L + L C + D + RPS+ E+
Sbjct: 215 WAVHN-------------GTRPPLIKN-----LPKPIESLMTRCWSKDPSQRPSMEEIVK 256
Query: 642 TLSKI 646
++ +
Sbjct: 257 IMTHL 261
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 49/253 (19%)
Query: 391 DAAVKVMKGDVSS----------EINILKKINHSNIIRLSGFCVHEGNT------YLVYE 434
D AVKV++ D++ E +NH I+ + + E T Y+V E
Sbjct: 56 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVME 113
Query: 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
+ D L D +H T +T K+ +++ D ALN+ H+ +H+++K +NI+
Sbjct: 114 YVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 165
Query: 495 LDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
+ K+ +FG+AR+ A+S G + T V+GT Y++PE + + DV
Sbjct: 166 ISATNAVKVMDFGIARAIADS------GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 219
Query: 554 FAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNE-YPL 612
++ G V+ E+L+G TGD + +VRE I PS R+E
Sbjct: 220 YSLGCVLYEVLTGEPPFTGDSPVS-----------VAYQHVREDP---IPPSARHEGLSA 265
Query: 613 DL-AFSMAQLAKN 624
DL A + LAKN
Sbjct: 266 DLDAVVLKALAKN 278
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ +A G L ++L +
Sbjct: 77 DDATEKDL-SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRAR 135
Query: 449 R-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R Y + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE 192
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N KI +FGLAR + ++ + +L +MAPE + + V T + DV++FG
Sbjct: 193 NNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 42/291 (14%)
Query: 336 LFPQASNSLSHPQGFRSAVESLT------LYKFQDLKIATGSFSEENRIQGSVYRGSFKG 389
L+ Q+ + +SH Q FR+A++ + Y +KI GS G V + K
Sbjct: 17 LYFQSMSRVSHEQ-FRAALQLVVSPGDPREYLANFIKIGEGS-------TGIVCIATEKH 68
Query: 390 DDAAVKVMKGDVSS---------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGA 440
V V K D+ E+ I++ +H N++ + + ++V EF + GA
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 441 LSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLR 500
L+D + T + +Q + V AL+YLH N +H+++K+ +ILL ++ R
Sbjct: 129 LTDIV------THTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGR 179
Query: 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVV 560
K+++FG + ++ + +VGT +MAPE I ++D+++ G++V
Sbjct: 180 IKLSDFGFCAQVSKEVPKR--------KXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMV 231
Query: 561 LELLSGREAVTGDQNCEA--ELLYASISRVLEESNVREKLRGFIDPSLRNE 609
+E++ G + +A + + RV + V LRGF+D L E
Sbjct: 232 IEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVRE 282
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 22/188 (11%)
Query: 390 DDAAVKVMKGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
DDA K + D+ SE+ ++K I H NII L G C +G Y++ +A G L ++L +
Sbjct: 77 DDATEKDL-SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRAR 135
Query: 449 R-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
R Y + +T+K V Y +A + YL + +H++L N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE 192
Query: 498 NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFG 557
N KI +FGLAR + ++ + +L +MAPE + + V T + DV++FG
Sbjct: 193 NNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 558 VVVLELLS 565
V++ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 43/231 (18%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMK-GDVS-----SEINI 407
ESL L K K+ G F G V+ ++ K AVK MK G +S +E N+
Sbjct: 182 ESLKLEK----KLGAGQF-------GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANV 230
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+K + H +++L E Y++ EF G+L D+L S+ + + +
Sbjct: 231 MKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQ 286
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT 527
+A + ++ + Y+H++L+ +NIL+ +L KI +FGLAR + ++ T
Sbjct: 287 IAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVG-------AKFPIKWT 336
Query: 528 RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577
APE I G T K DV++FG++++E+++ GR G N E
Sbjct: 337 ----------APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 377
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 34/230 (14%)
Query: 361 KFQDLKI-ATGSFSEE---NRIQGSVYRGSFKGDDAAVKVMKG---------DVSSEINI 407
+F+ LK+ GSF + +I GS R + A+KV+K E +I
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLY-----AMKVLKKATLKVRDRVRTKMERDI 79
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
L ++NH I++L EG YL+ +F G L L T +++ + +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAE 134
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT 527
+A AL++LH ++++LK NILLD K+T+FGL S ES +HE+ Y
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGL--SKESIDHEKKAYSF--- 186
Query: 528 RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
GT YMAPE + T D ++FGV++ E+L+G G E
Sbjct: 187 ---CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 233
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 34/230 (14%)
Query: 361 KFQDLKI-ATGSFSEE---NRIQGSVYRGSFKGDDAAVKVMKG---------DVSSEINI 407
+F+ LK+ GSF + +I GS R + A+KV+K E +I
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLY-----AMKVLKKATLKVRDRVRTKMERDI 80
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
L ++NH I++L EG YL+ +F G L L T +++ + +
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAE 135
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT 527
+A AL++LH ++++LK NILLD K+T+FGL S ES +HE+ Y
Sbjct: 136 LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGL--SKESIDHEKKAYSF--- 187
Query: 528 RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
GT YMAPE + T D ++FGV++ E+L+G G E
Sbjct: 188 ---CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 234
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 44/270 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 88 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 141
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQ-GGYGLQLTRHVVGTYGYMAPEYIENGVITPK 550
N L+ N K+ +FGL+R D + G + + APE + + K
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--------WTAPESLAYNKFSIK 193
Query: 551 LDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNE 609
DV+AFGV++ E+ + G G +S+V E ++ R E
Sbjct: 194 SDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRME 233
Query: 610 YPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
P + +L + C + + RPS +E+
Sbjct: 234 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 36/304 (11%)
Query: 350 FRSAVESLTLYKFQDLKIATGSFSE-----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSE 404
++ A + +Y F+D+ + TG+FSE + R Q V + A++ +G + +E
Sbjct: 10 WKQAEDIRDIYDFRDV-LGTGAFSEVILAEDKRTQKLVAIKCIAKE--ALEGKEGSMENE 66
Query: 405 INILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQI 464
I +L KI H NI+ L G+ YL+ + G L D + + T + + ++
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RL 121
Query: 465 AYDVANALNYLHKYTNPPYVHKNLKTSNIL---LDTNLRAKITNFGLARSAESDEHEQGG 521
+ V +A+ YLH + VH++LK N+L LD + + I++FGL++ E G
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM------EDPG 172
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG-------REAVTGDQ 574
L GT GY+APE + + +D ++ GV+ LL G +A +Q
Sbjct: 173 SVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 575 NCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP 634
+AE + S + ++ +R ++ + + A +A + TA D N
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQ 288
Query: 635 SISE 638
S+SE
Sbjct: 289 SVSE 292
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 44/270 (16%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 432 VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
+ EF G L D+L Q + + + +A +++A+ YL K ++H++L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAMEYLEKKN---FIHRDLAAR 142
Query: 492 NILLDTNLRAKITNFGLARSAESDEHEQ-GGYGLQLTRHVVGTYGYMAPEYIENGVITPK 550
N L+ N K+ +FGL+R D + G + + APE + + K
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--------WTAPESLAYNKFSIK 194
Query: 551 LDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNE 609
DV+AFGV++ E+ + G G +S+V E ++ R E
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYPG----------IDLSQVYE----------LLEKDYRME 234
Query: 610 YPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
P + +L + C + + RPS +E+
Sbjct: 235 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 36/304 (11%)
Query: 350 FRSAVESLTLYKFQDLKIATGSFSE-----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSE 404
++ A + +Y F+D+ + TG+FSE + R Q V + A++ +G + +E
Sbjct: 10 WKQAEDIRDIYDFRDV-LGTGAFSEVILAEDKRTQKLVAIKCIAKE--ALEGKEGSMENE 66
Query: 405 INILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQI 464
I +L KI H NI+ L G+ YL+ + G L D + + T + + ++
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RL 121
Query: 465 AYDVANALNYLHKYTNPPYVHKNLKTSNIL---LDTNLRAKITNFGLARSAESDEHEQGG 521
+ V +A+ YLH + VH++LK N+L LD + + I++FGL++ E G
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM------EDPG 172
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG-------REAVTGDQ 574
L GT GY+APE + + +D ++ GV+ LL G +A +Q
Sbjct: 173 SVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 575 NCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP 634
+AE + S + ++ +R ++ + + A +A + TA D N
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQ 288
Query: 635 SISE 638
S+SE
Sbjct: 289 SVSE 292
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 36/304 (11%)
Query: 350 FRSAVESLTLYKFQDLKIATGSFSE-----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSE 404
++ A + +Y F+D+ + TG+FSE + R Q V + A++ +G + +E
Sbjct: 10 WKQAEDIRDIYDFRDV-LGTGAFSEVILAEDKRTQKLVAIKCIAKE--ALEGKEGSMENE 66
Query: 405 INILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQI 464
I +L KI H NI+ L G+ YL+ + G L D + + T + + ++
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RL 121
Query: 465 AYDVANALNYLHKYTNPPYVHKNLKTSNIL---LDTNLRAKITNFGLARSAESDEHEQGG 521
+ V +A+ YLH + VH++LK N+L LD + + I++FGL++ E G
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM------EDPG 172
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG-------REAVTGDQ 574
L GT GY+APE + + +D ++ GV+ LL G +A +Q
Sbjct: 173 SVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 575 NCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP 634
+AE + S + ++ +R ++ + + A +A + TA D N
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQ 288
Query: 635 SISE 638
S+SE
Sbjct: 289 SVSE 292
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 36/304 (11%)
Query: 350 FRSAVESLTLYKFQDLKIATGSFSE-----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSE 404
++ A + +Y F+D+ + TG+FSE + R Q V A++ +G + +E
Sbjct: 10 WKQAEDIRDIYDFRDV-LGTGAFSEVILAEDKRTQKLVAIKCIA--KKALEGKEGSMENE 66
Query: 405 INILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQI 464
I +L KI H NI+ L G+ YL+ + G L D + + T + + ++
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RL 121
Query: 465 AYDVANALNYLHKYTNPPYVHKNLKTSNIL---LDTNLRAKITNFGLARSAESDEHEQGG 521
+ V +A+ YLH + VH++LK N+L LD + + I++FGL++ E G
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM------EDPG 172
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG-------REAVTGDQ 574
L GT GY+APE + + +D ++ GV+ LL G +A +Q
Sbjct: 173 SVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 575 NCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP 634
+AE + S + ++ +R ++ + + A +A + TA D N
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQ 288
Query: 635 SISE 638
S+SE
Sbjct: 289 SVSE 292
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 35/245 (14%)
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
E+ +++ + H N+++ G + + E+ G L + S Q W QRV
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP----WSQRV 111
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
A D+A+ + YLH +H++L + N L+ N + +FGLAR DE Q
Sbjct: 112 SFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLM-VDEKTQP-E 166
Query: 523 GLQLTRH--------VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GL+ + VVG +MAPE I K+DVF+FG+V+ E++ G
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-------GRV 219
Query: 575 NCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP 634
N + + L ++ L +RGF+D P + S + C D RP
Sbjct: 220 NADPDYLPRTMDFGL-------NVRGFLD----RYCPPNCPPSFFPITVRCCDLDPEKRP 268
Query: 635 SISEV 639
S ++
Sbjct: 269 SFVKL 273
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 29/258 (11%)
Query: 395 KVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW-LHSNRYQTS 453
K++K EI +LK++ H N++ L C + YLV+EF D+ L D L N
Sbjct: 65 KMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN----- 119
Query: 454 DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513
L ++ + + + N + + H + +H+++K NIL+ + K+ +FG AR+
Sbjct: 120 -GLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLA 175
Query: 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSGREAVTG 572
+ ++ V T Y APE + V K +DV+A G +V E+ G G
Sbjct: 176 APG--------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPG 227
Query: 573 DQNCE-----AELLYASISRVLEESNVREKLRGFIDPSLRNEYPLD-----LAFSMAQLA 622
D + + L I R E N G P ++ PL+ L+ + LA
Sbjct: 228 DSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLA 287
Query: 623 KNCTAHDLNARPSISEVF 640
K C D + RP +E+
Sbjct: 288 KKCLHIDPDKRPFCAELL 305
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 104/209 (49%), Gaps = 32/209 (15%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVSS-----EINILKKINHSNIIR 418
++ TG F G V G ++G D A+K++K G +S E ++ ++H +++
Sbjct: 16 ELGTGQF-------GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHS--NRYQTSDNLTWKQRVQIAYDVANALNYLH 476
L G C + +++ E+ NG L ++L +R+QT +Q +++ DV A+ YL
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLE 122
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGY 536
+ ++H++L N L++ K+++FGL+R DE+ +R +
Sbjct: 123 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-------SRGSKFPVRW 172
Query: 537 MAPEYIENGVITPKLDVFAFGVVVLELLS 565
PE + + K D++AFGV++ E+ S
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 33/211 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMK----------GDVSSEINILKKINHSNI 416
+ G+F + V + G AVK++ G + EI LK H +I
Sbjct: 24 LGVGTFG-----KVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
I+L + ++V E+ G L D++ N L K+ ++ + + ++Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCH 133
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGY 536
++ VH++LK N+LLD ++ AKI +FGL+ E R G+ Y
Sbjct: 134 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---------FLRXSCGSPNY 181
Query: 537 MAPEYIENGVIT-PKLDVFAFGVVVLELLSG 566
APE I + P++D+++ GV++ LL G
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 32/209 (15%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVSS-----EINILKKINHSNIIR 418
++ TG F G V G ++G D A+K++K G +S E ++ ++H +++
Sbjct: 31 ELGTGQF-------GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHS--NRYQTSDNLTWKQRVQIAYDVANALNYLH 476
L G C + +++ E+ NG L ++L +R+QT +Q +++ DV A+ YL
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLE 137
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGY 536
+ ++H++L N L++ K+++FGL+R DE E G + +
Sbjct: 138 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-ETSSVGSKFPVR------W 187
Query: 537 MAPEYIENGVITPKLDVFAFGVVVLELLS 565
PE + + K D++AFGV++ E+ S
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 27/195 (13%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYL 431
G VY G +K AVK +K D E ++K+I H N+++L G C E Y+
Sbjct: 46 GEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYI 105
Query: 432 VYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
V E+ G L D+L NR + +T + +A +++A+ YL K ++H++L
Sbjct: 106 VTEYMPYGNLLDYLRECNR----EEVTAVVLLYMATQISSAMEYLEKKN---FIHRDLAA 158
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAPEYIENGVIT 548
N L+ N K+ +FGL+R D + T H + + APE + +
Sbjct: 159 RNCLVGENHVVKVADFGLSRLMTGDTY---------TAHAGAKFPIKWTAPESLAYNTFS 209
Query: 549 PKLDVFAFGVVVLEL 563
K DV+AFGV++ E+
Sbjct: 210 IKSDVWAFGVLLWEI 224
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 38/212 (17%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVSS-----EINILKKINHSNIIR 418
++ TG F G V G ++G D A+K++K G +S E ++ ++H +++
Sbjct: 11 ELGTGQF-------GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHS--NRYQTSDNLTWKQRVQIAYDVANALNYLH 476
L G C + +++ E+ NG L ++L +R+QT +Q +++ DV A+ YL
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLE 117
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT--- 533
+ ++H++L N L++ K+++FGL+R DE+ VG+
Sbjct: 118 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----------VGSKFP 164
Query: 534 YGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ PE + + K D++AFGV++ E+ S
Sbjct: 165 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 29/268 (10%)
Query: 389 GDDAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEGNT--YLVYEFADN 438
G+ AVK +K D EI+IL+ + H +II+ G C +G LV E+
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498
G+L D+L + ++ Q + A + + YLH + Y+H+NL N+LLD +
Sbjct: 103 GSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDND 153
Query: 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGV 558
KI +FGLA++ +G ++ + APE ++ DV++FGV
Sbjct: 154 RLVKIGDFGLAKAV-----PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGV 208
Query: 559 VVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSM 618
+ ELL+ ++ EL+ + + +L ++ R P +
Sbjct: 209 TLYELLTHCDSSQSPPTKFLELI-----GIAQGQMTVLRLTELLERGERLPRPDKCPCEV 263
Query: 619 AQLAKNCTAHDLNARPSISEVFVTLSKI 646
L KNC + + RP+ + L +
Sbjct: 264 YHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 45/266 (16%)
Query: 310 KKNPTPVLTPGRVPPPKTPLDCADYSLFPQASNSLSHPQGFRSAVESLTLYKFQDLKIAT 369
K P P+ T P P + D LF + N L D+++
Sbjct: 304 KPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLL-----------------IADIELGC 346
Query: 370 GSFSEENRIQGSVYRGSFKGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSG 421
G+F ++ VYR K D A+KV+K ++ E I+ ++++ I+RL G
Sbjct: 347 GNFGS---VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNP 481
C E LV E A G L +L R + + ++ + V+ + YL +
Sbjct: 404 VCQAEA-LMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN-- 456
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY--GYMAP 539
+VH+NL N+LL AKI++FGL+++ +D+ T G + + AP
Sbjct: 457 -FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS-------YYTARSAGKWPLKWYAP 508
Query: 540 EYIENGVITPKLDVFAFGVVVLELLS 565
E I + + DV+++GV + E LS
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 38/212 (17%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVSS-----EINILKKINHSNIIR 418
++ TG F G V G ++G D A+K++K G +S E ++ ++H +++
Sbjct: 15 ELGTGQF-------GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHS--NRYQTSDNLTWKQRVQIAYDVANALNYLH 476
L G C + +++ E+ NG L ++L +R+QT +Q +++ DV A+ YL
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLE 121
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT--- 533
+ ++H++L N L++ K+++FGL+R DE+ VG+
Sbjct: 122 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----------VGSKFP 168
Query: 534 YGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ PE + + K D++AFGV++ E+ S
Sbjct: 169 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 52/285 (18%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 63 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 122
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + YL + +VH
Sbjct: 123 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKYL---ASKKFVH 175
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 176 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--------WMALES 227
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
++ T K DV++FGV++ EL++ D N +Y R L
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL------------ 275
Query: 602 IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
L+ EY D + ++ C RPS SE+ +S I
Sbjct: 276 ----LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 38/212 (17%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVSS-----EINILKKINHSNIIR 418
++ TG F G V G ++G D A+K++K G +S E ++ ++H +++
Sbjct: 16 ELGTGQF-------GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHS--NRYQTSDNLTWKQRVQIAYDVANALNYLH 476
L G C + +++ E+ NG L ++L +R+QT +Q +++ DV A+ YL
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLE 122
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT--- 533
+ ++H++L N L++ K+++FGL+R DE+ VG+
Sbjct: 123 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----------VGSKFP 169
Query: 534 YGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ PE + + K D++AFGV++ E+ S
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 36/211 (17%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVSS-----EINILKKINHSNIIR 418
++ TG F G V G ++G D A+K++K G +S E ++ ++H +++
Sbjct: 31 ELGTGQF-------GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHS--NRYQTSDNLTWKQRVQIAYDVANALNYLH 476
L G C + +++ E+ NG L ++L +R+QT +Q +++ DV A+ YL
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLE 137
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY-- 534
+ ++H++L N L++ K+++FGL+R DE+ T V +
Sbjct: 138 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---------TSSVGSKFPV 185
Query: 535 GYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ PE + + K D++AFGV++ E+ S
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 36/211 (17%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVSS-----EINILKKINHSNIIR 418
++ TG F G V G ++G D A+K++K G +S E ++ ++H +++
Sbjct: 22 ELGTGQF-------GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHS--NRYQTSDNLTWKQRVQIAYDVANALNYLH 476
L G C + +++ E+ NG L ++L +R+QT +Q +++ DV A+ YL
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLE 128
Query: 477 KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY-- 534
+ ++H++L N L++ K+++FGL+R DE+ T V +
Sbjct: 129 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---------TSSVGSKFPV 176
Query: 535 GYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ PE + + K D++AFGV++ E+ S
Sbjct: 177 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 33/204 (16%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + YL + +VH
Sbjct: 103 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKYL---ASKKFVH 155
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK--------WMALES 207
Query: 542 IENGVITPKLDVFAFGVVVLELLS 565
++ T K DV++FGV++ EL++
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 29/268 (10%)
Query: 389 GDDAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEGNT--YLVYEFADN 438
G+ AVK +K D EI+IL+ + H +II+ G C +G LV E+
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498
G+L D+L + ++ Q + A + + YLH Y+H+NL N+LLD +
Sbjct: 103 GSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDND 153
Query: 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGV 558
KI +FGLA++ +G ++ + APE ++ DV++FGV
Sbjct: 154 RLVKIGDFGLAKAV-----PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGV 208
Query: 559 VVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSM 618
+ ELL+ ++ EL+ + + +L ++ R P +
Sbjct: 209 TLYELLTHCDSSQSPPTKFLELI-----GIAQGQMTVLRLTELLERGERLPRPDKCPCEV 263
Query: 619 AQLAKNCTAHDLNARPSISEVFVTLSKI 646
L KNC + + RP+ + L +
Sbjct: 264 YHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 33/204 (16%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + YL + +VH
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKYL---ASKKFVH 156
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--------WMALES 208
Query: 542 IENGVITPKLDVFAFGVVVLELLS 565
++ T K DV++FGV++ EL++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 52/285 (18%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 36 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 95
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + YL + +VH
Sbjct: 96 EGSPLVVLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYL---ASKKFVH 148
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 149 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--------WMALES 200
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
++ T K DV++FGV++ EL++ D N +Y R L
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL------------ 248
Query: 602 IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
L+ EY D + ++ C RPS SE+ +S I
Sbjct: 249 ----LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 52/285 (18%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 62 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 121
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + YL + +VH
Sbjct: 122 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKYL---ASKKFVH 174
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 175 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--------WMALES 226
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
++ T K DV++FGV++ EL++ D N +Y R L
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL------------ 274
Query: 602 IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
L+ EY D + ++ C RPS SE+ +S I
Sbjct: 275 ----LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 52/285 (18%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 39 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 98
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + YL + +VH
Sbjct: 99 EGSPLVVLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYL---ASKKFVH 151
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 152 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--------WMALES 203
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
++ T K DV++FGV++ EL++ D N +Y R L
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL------------ 251
Query: 602 IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
L+ EY D + ++ C RPS SE+ +S I
Sbjct: 252 ----LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 52/285 (18%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + YL + +VH
Sbjct: 103 EGSPLVVLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYL---ASKKFVH 155
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--------WMALES 207
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
++ T K DV++FGV++ EL++ D N +Y R L
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL------------ 255
Query: 602 IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
L+ EY D + ++ C RPS SE+ +S I
Sbjct: 256 ----LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 33/204 (16%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 41 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 100
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + YL + +VH
Sbjct: 101 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKYL---ASKKFVH 153
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 154 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--------WMALES 205
Query: 542 IENGVITPKLDVFAFGVVVLELLS 565
++ T K DV++FGV++ EL++
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 52/285 (18%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + YL + +VH
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYL---ASKKFVH 156
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--------WMALES 208
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
++ T K DV++FGV++ EL++ D N +Y R L
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL------------ 256
Query: 602 IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
L+ EY D + ++ C RPS SE+ +S I
Sbjct: 257 ----LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 33/204 (16%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + YL + +VH
Sbjct: 102 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKYL---ASKKFVH 154
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--------WMALES 206
Query: 542 IENGVITPKLDVFAFGVVVLELLS 565
++ T K DV++FGV++ EL++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 47/225 (20%)
Query: 368 ATGSFSEENRIQGSVYRGSF----------KGDDAAVKVM----------KGDVSSEINI 407
+T FS+ + Q + +GSF G + AVKV+ K + E+ +
Sbjct: 26 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 85
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAY 466
LK+++H NI++L F +G YLV E G L D + S R+ D +I
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA------ARIIR 139
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILL-----DTNLRAKITNFGLARSAESDEHEQGG 521
V + + Y+HK VH++LK N+LL D N+R I +FGL+ E+ +
Sbjct: 140 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIR--IIDFGLSTHFEASKK---- 190
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+ +GT Y+APE + +G K DV++ GV++ LLSG
Sbjct: 191 -----MKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 229
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 26 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 78
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 79 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 133
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 134 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 191 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 237
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + + C D ++RP E+ + S
Sbjct: 238 ISSILEKGE-------------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 284
Query: 645 KI 646
K+
Sbjct: 285 KM 286
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 398 KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-------- 449
+ D E +L + H +I++ G C +V+E+ +G L+ +L ++
Sbjct: 61 RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVD 120
Query: 450 ---YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
Q L Q + IA +A+ + YL + +VH++L T N L+ NL KI +F
Sbjct: 121 GQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDF 177
Query: 507 GLARSAES-DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
G++R S D + GG+ + R +M PE I T + DV++FGV++ E+ +
Sbjct: 178 GMSRDVYSTDYYRVGGHTMLPIR-------WMPPESIMYRKFTTESDVWSFGVILWEIFT 230
Query: 566 -GREAVTGDQNCEAELLYASISRVLEESNV 594
G++ N E + + RVLE V
Sbjct: 231 YGKQPWFQLSNTEV-IECITQGRVLERPRV 259
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 19 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 72 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 126
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 184 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 230
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + + C D ++RP E+ + S
Sbjct: 231 ISSILEKGE-------------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 277
Query: 645 KI 646
K+
Sbjct: 278 KM 279
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 47/225 (20%)
Query: 368 ATGSFSEENRIQGSVYRGSF----------KGDDAAVKVM-------KGDVSS---EINI 407
+T FS+ + Q + +GSF G + AVKV+ K D S E+ +
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAY 466
LK+++H NI++L F +G YLV E G L D + S R+ D +I
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA------ARIIR 133
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILL-----DTNLRAKITNFGLARSAESDEHEQGG 521
V + + Y+HK VH++LK N+LL D N+R I +FGL+ E+ +
Sbjct: 134 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIR--IIDFGLSTHFEASKK---- 184
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+ +GT Y+APE + +G K DV++ GV++ LLSG
Sbjct: 185 -----MKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 398 KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--------R 449
+ D E +L + H +I++ G CV +V+E+ +G L+ +L ++
Sbjct: 59 RKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAE 118
Query: 450 YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509
LT Q + IA +A + YL + +VH++L T N L+ NL KI +FG++
Sbjct: 119 GNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
Query: 510 RSAES-DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
R S D + GG+ + R +M PE I T + DV++ GVV+ E+ +
Sbjct: 176 RDVYSTDYYRVGGHTMLPIR-------WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 109
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 167 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
Query: 572 GDQNCE 577
GD E
Sbjct: 218 GDTKQE 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 16 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 69 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 123
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 181 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 227
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + + C D ++RP E+ + S
Sbjct: 228 ISSILEKGE-------------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274
Query: 645 KI 646
K+
Sbjct: 275 KM 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 109
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 167 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
Query: 572 GDQNCE 577
GD E
Sbjct: 218 GDTKQE 223
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 40/203 (19%)
Query: 392 AAVKVMKGD--------VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALS 442
AVK++K + SE+ ++ ++ +H NI+ L G C G YL++E+ G L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 443 DWLHSNRYQTSDN------------------LTWKQRVQIAYDVANALNYLHKYTNPPYV 484
++L S R + S++ LT++ + AY VA + +L V
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCV 194
Query: 485 HKNLKTSNILLDTNLRAKITNFGLARSAESDEHE--QGGYGLQLTRHVVGTYGYMAPEYI 542
H++L N+L+ KI +FGLAR SD + +G L + +MAPE +
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK--------WMAPESL 246
Query: 543 ENGVITPKLDVFAFGVVVLELLS 565
G+ T K DV+++G+++ E+ S
Sbjct: 247 FEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 132/301 (43%), Gaps = 56/301 (18%)
Query: 380 GSVYRGSFKGDDAAVKVM----KGDVSSEINILKKI--NHSNIIRLSGFCVHE------- 426
G V+ G ++G+ AVKV + E I + + H NI+ GF +
Sbjct: 51 GEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENIL---GFIAADIKGTGSW 107
Query: 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT-----NP 481
YL+ ++ +NG+L D+L S L K +++AY + L +LH P
Sbjct: 108 TQLYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP 161
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL---TRHVVGTYGYMA 538
H++LK+ NIL+ N I + GLA SD +E + + TR VGT YM
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE-----VDIPPNTR--VGTKRYMP 214
Query: 539 PEYIENGVITPKL------DVFAFGVVVLELLSGREAVTGDQNCEAELLYASIS------ 586
PE ++ + D+++FG+++ E+ R V+G E +L Y +
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLPYHDLVPSDPSY 272
Query: 587 RVLEESNVREKLRGFIDPSLRNEYPLDLAF-SMAQLAKNCTAHDLNARPSISEVFVTLSK 645
+ E +KLR PS N + D M +L C AH+ +R + V TL+K
Sbjct: 273 EDMREIVCIKKLR----PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328
Query: 646 I 646
+
Sbjct: 329 M 329
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 47/225 (20%)
Query: 368 ATGSFSEENRIQGSVYRGSF----------KGDDAAVKVM-------KGDVSS---EINI 407
+T FS+ + Q + +GSF G + AVKV+ K D S E+ +
Sbjct: 44 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 103
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAY 466
LK+++H NI++L F +G YLV E G L D + S R+ D +I
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA------ARIIR 157
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILL-----DTNLRAKITNFGLARSAESDEHEQGG 521
V + + Y+HK VH++LK N+LL D N+R I +FGL+ E+ +
Sbjct: 158 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIR--IIDFGLSTHFEASKK---- 208
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+ +GT Y+APE + +G K DV++ GV++ LLSG
Sbjct: 209 -----MKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 247
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 55/299 (18%)
Query: 358 TLYKFQ-DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK------------GDVSSE 404
TL F+ + KI G FSE VYR + D V + K D E
Sbjct: 30 TLANFRIEKKIGRGQFSE-------VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKE 82
Query: 405 INILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTS---DNLTWKQR 461
I++LK++NH N+I+ + + +V E AD G LS + + Q + WK
Sbjct: 83 IDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
VQ+ +AL ++H +H+++K +N+ + K+ + GL R S
Sbjct: 143 VQL----CSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT----- 190
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELL 581
+VGT YM+PE I K D+++ G ++ E+ + + GD+ +
Sbjct: 191 ---TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-----MN 242
Query: 582 YASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
S+ + +E+ + P L +++ + + QL C D RP ++ V+
Sbjct: 243 LYSLCKKIEQCDY---------PPLPSDH---YSEELRQLVNMCINPDPEKRPDVTYVY 289
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 48/297 (16%)
Query: 380 GSVYRGSFKGDDAAVKVMKGDVS------SEINILKKINHSNIIRLSGFCVHEGN----- 428
G V+RG ++G++ AVK+ +EI + H NI+ GF +
Sbjct: 56 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAADNKDNGTW 112
Query: 429 --TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT-----NP 481
+LV ++ ++G+L D+L NRY +T + +++A A+ L +LH P
Sbjct: 113 TQLWLVSDYHEHGSLFDYL--NRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT-RHVVGTYGYMAPE 540
H++LK+ NIL+ N I + GLA H+ + + H VGT YMAPE
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAV-----RHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 541 YIENGVIT------PKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594
+++ + + D++A G+V E+ R G + + +L Y + V + +V
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDL--VPSDPSV 277
Query: 595 REKLRGFIDPSLRNEYP-----LDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E + + LR P + MA++ + C + AR + + TLS++
Sbjct: 278 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 47/225 (20%)
Query: 368 ATGSFSEENRIQGSVYRGSF----------KGDDAAVKVM-------KGDVSS---EINI 407
+T FS+ + Q + +GSF G + AVKV+ K D S E+ +
Sbjct: 43 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 102
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAY 466
LK+++H NI++L F +G YLV E G L D + S R+ D +I
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA------ARIIR 156
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILL-----DTNLRAKITNFGLARSAESDEHEQGG 521
V + + Y+HK VH++LK N+LL D N+R I +FGL+ E+ +
Sbjct: 157 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIR--IIDFGLSTHFEASKK---- 207
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+ +GT Y+APE + +G K DV++ GV++ LLSG
Sbjct: 208 -----MKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 246
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 52/285 (18%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 49 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 108
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + +L + +VH
Sbjct: 109 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFL---ASKKFVH 161
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 162 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--------WMALES 213
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
++ T K DV++FGV++ EL++ D N +Y R L
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL------------ 261
Query: 602 IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
L+ EY D + ++ C RPS SE+ +S I
Sbjct: 262 ----LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 33/204 (16%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 103 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 162
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + +L + +VH
Sbjct: 163 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFL---ASKKFVH 215
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 216 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--------WMALES 267
Query: 542 IENGVITPKLDVFAFGVVVLELLS 565
++ T K DV++FGV++ EL++
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 52/285 (18%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + +L + +VH
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFL---ASKKFVH 156
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--------WMALES 208
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
++ T K DV++FGV++ EL++ D N +Y R L
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL------------ 256
Query: 602 IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
L+ EY D + ++ C RPS SE+ +S I
Sbjct: 257 ----LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 389 GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNG 439
G+ AVK ++ D EI ILK + H NI++ G C G N L+ E+ G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 440 ALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL 499
+L D+L ++ + + + +Q + + YL Y+H+NL T NIL++
Sbjct: 100 SLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENEN 152
Query: 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVV 559
R KI +FGL + D+ ++ + APE + + DV++FGVV
Sbjct: 153 RVKIGDFGLTKVLPQDKEY-----YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 207
Query: 560 VLELLS 565
+ EL +
Sbjct: 208 LYELFT 213
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 93/196 (47%), Gaps = 33/196 (16%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLVY-EFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 442 SDWLHSNR-----YQT-----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTS 491
S +L S R Y+T D LT + + ++ VA + +L + +H++L
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 177
Query: 492 NILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
NILL KI +FGLAR + D +G L L +MAPE I + V T
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK--------WMAPETIFDRVYTI 229
Query: 550 KLDVFAFGVVVLELLS 565
+ DV++FGV++ E+ S
Sbjct: 230 QSDVWSFGVLLWEIFS 245
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 48/297 (16%)
Query: 380 GSVYRGSFKGDDAAVKVMKGDVS------SEINILKKINHSNIIRLSGFCVHEGN----- 428
G V+RG ++G++ AVK+ +EI + H NI+ GF +
Sbjct: 43 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAADNKDNGTW 99
Query: 429 --TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT-----NP 481
+LV ++ ++G+L D+L NRY +T + +++A A+ L +LH P
Sbjct: 100 TQLWLVSDYHEHGSLFDYL--NRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 153
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT-RHVVGTYGYMAPE 540
H++LK+ NIL+ N I + GLA H+ + + H VGT YMAPE
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLAV-----RHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 541 YIENGVIT------PKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594
+++ + + D++A G+V E+ R G + + +L Y + V + +V
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDL--VPSDPSV 264
Query: 595 REKLRGFIDPSLRNEYP-----LDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E + + LR P + MA++ + C + AR + + TLS++
Sbjct: 265 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 321
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 33/204 (16%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + +L + +VH
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFL---ASKKFVH 156
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--------WMALES 208
Query: 542 IENGVITPKLDVFAFGVVVLELLS 565
++ T K DV++FGV++ EL++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 33/204 (16%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + +L + +VH
Sbjct: 102 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFL---ASKKFVH 154
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--------WMALES 206
Query: 542 IENGVITPKLDVFAFGVVVLELLS 565
++ T K DV++FGV++ EL++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 16 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 69 YVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHK----DNIGSQYLLNWC 123
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 181 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 227
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 228 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274
Query: 645 KI 646
K+
Sbjct: 275 KM 276
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 33/204 (16%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + +L + +VH
Sbjct: 105 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFL---ASKKFVH 157
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK--------WMALES 209
Query: 542 IENGVITPKLDVFAFGVVVLELLS 565
++ T K DV++FGV++ EL++
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 33/204 (16%)
Query: 380 GSVYRGSFKGDDA-----AVKVMK-----GDVS---SEINILKKINHSNIIRLSGFCVH- 425
G VY G+ +D AVK + G+VS +E I+K +H N++ L G C+
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVH 485
EG+ +V + +G L +++ + + N T K + VA + +L + +VH
Sbjct: 105 EGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFL---ASKKFVH 157
Query: 486 KNLKTSNILLDTNLRAKITNFGLARSAESDE----HEQGGYGLQLTRHVVGTYGYMAPEY 541
++L N +LD K+ +FGLAR E H + G L + +MA E
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--------WMALES 209
Query: 542 IENGVITPKLDVFAFGVVVLELLS 565
++ T K DV++FGV++ EL++
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 17 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 69
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 70 YVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHK----DNIGSQYLLNWC 124
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 125 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 182 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 228
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 229 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 275
Query: 645 KI 646
K+
Sbjct: 276 KM 277
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 30/191 (15%)
Query: 385 GSFKGDDAAVKVMKGDVSSEINILKKIN-HSNIIRLSGFCVHEGNTY--LVYEFADNGAL 441
GSF ++ V+ ++ E++IL+K++ H NII+L +E NT+ LV++ G L
Sbjct: 43 GSFSAEE--VQELREATLKEVDILRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGEL 98
Query: 442 SDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA 501
D+L L+ K+ +I + + LHK VH++LK NILLD ++
Sbjct: 99 FDYLTEKV-----TLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNI 150
Query: 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV------ITPKLDVFA 555
K+T+FG S + D E+ R V GT Y+APE IE + ++D+++
Sbjct: 151 KLTDFGF--SCQLDPGEK-------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 201
Query: 556 FGVVVLELLSG 566
GV++ LL+G
Sbjct: 202 TGVIMYTLLAG 212
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 20 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 72
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 73 YVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHK----DNIGSQYLLNWC 127
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 128 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 185 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 231
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 232 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 278
Query: 645 KI 646
K+
Sbjct: 279 KM 280
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 39/237 (16%)
Query: 347 PQGFRSAVESLTLYKFQDLK----IATGSFSEENRIQGSVYRGSFKGDDAAVKVM----- 397
P G L + K +LK + +G+F G+VY+G + + VK+
Sbjct: 22 PSGTAPNQAQLRILKETELKRVKVLGSGAF-------GTVYKGIWVPEGETVKIPVAIKI 74
Query: 398 -------KGDVS--SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
K +V E I+ ++H +++RL G C+ LV + +G L +++H +
Sbjct: 75 LNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEH 133
Query: 449 RYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508
+ DN+ + + +A + YL + VH++L N+L+ + KIT+FGL
Sbjct: 134 K----DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGL 186
Query: 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
AR E DE E G ++ +MA E I T + DV+++GV + EL++
Sbjct: 187 ARLLEGDEKEYNADGGKM------PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 19 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 72 YVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHK----DNIGSQYLLNWC 126
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 184 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 230
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 231 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 277
Query: 645 KI 646
K+
Sbjct: 278 KM 279
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ ++G+F G+VY+G + + VK+ ++ E
Sbjct: 23 EFKKIKVLSSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 76 YVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHK----DNIGSQYLLNWC 130
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 188 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 234
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 235 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 281
Query: 645 KI 646
K+
Sbjct: 282 KM 283
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK-----ES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 18 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 71 YVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHK----DNIGSQYLLNWC 125
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 183 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 229
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 230 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 276
Query: 645 KI 646
K+
Sbjct: 277 KM 278
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 130/308 (42%), Gaps = 43/308 (13%)
Query: 307 RNSKKNPTPVLTPGRVPPPKTPLDCADYSLFPQASNSLSHPQGFRSAVESLTLYKFQDLK 366
R ++N P PG P + P + + F A + P RS +++ +K
Sbjct: 107 RARQENGMPEKPPGPRSPQREPQRVS-HEQFRAALQLVVDPGDPRSYLDNF-------IK 158
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSS---------EINILKKINHSNII 417
I GS G V + + V V K D+ E+ I++ H N++
Sbjct: 159 IGEGS-------TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 211
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK 477
+ + ++V EF + GAL+D + T + +Q + V AL+ LH
Sbjct: 212 EMYNSYLVGDELWVVMEFLEGGALTDIV------THTRMNEEQIAAVCLAVLQALSVLHA 265
Query: 478 YTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYM 537
+H+++K+ +ILL + R K+++FG + + + +VGT +M
Sbjct: 266 QG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--------VPRRKXLVGTPYWM 314
Query: 538 APEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYAS--ISRVLEESNVR 595
APE I P++D+++ G++V+E++ G + +A + R+ V
Sbjct: 315 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS 374
Query: 596 EKLRGFID 603
L+GF+D
Sbjct: 375 PSLKGFLD 382
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 129/304 (42%), Gaps = 65/304 (21%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKV---MKGDVSSEINILKK------------ 410
+I G F G V++G D + V + + GD E +++K
Sbjct: 26 QIGKGGF-------GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 411 -INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVA 469
+NH NI++L G +V EF G L L + + W ++++ D+A
Sbjct: 79 NLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIA 132
Query: 470 NALNYLHKYTNPPYVHKNLKTSNIL---LDTN--LRAKITNFGLARSAESDEHEQGGYGL 524
+ Y+ NPP VH++L++ NI LD N + AK+ +FGL++ + H G
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS---VHSVSG--- 185
Query: 525 QLTRHVVGTYGYMAPEYI--ENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582
++G + +MAPE I E T K D ++F +++ +L+G E Y
Sbjct: 186 -----LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-------EYSY 233
Query: 583 ASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642
I + + +RE+ LR P D + + + C + D RP S +
Sbjct: 234 GKIKFI---NMIREE-------GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 643 LSKI 646
LS++
Sbjct: 284 LSEL 287
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ ++G+F G+VY+G + + VK+ ++ E
Sbjct: 16 EFKKIKVLSSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 69 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 123
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 181 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 227
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 228 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274
Query: 645 KI 646
K+
Sbjct: 275 KM 276
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 32/195 (16%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLV-YEFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 442 SDWLHSNRYQT---------SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
S +L S R + D LT + + ++ VA + +L + +H++L N
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARN 178
Query: 493 ILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPK 550
ILL KI +FGLAR + D +G L L +MAPE I + V T +
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK--------WMAPETIFDRVYTIQ 230
Query: 551 LDVFAFGVVVLELLS 565
DV++FGV++ E+ S
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + D+ E++ILK+I H N+I L ++ + L+ E G L D+L ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE-----KES 110
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
LT ++ + + N + YLH H +LK NI LLD N+ R KI +FGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
+ +G + +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 168 ID--------FGNEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 572 GDQNCE 577
GD E
Sbjct: 219 GDTKQE 224
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 380 GSVYRGSFKGDDA-----AVKVMKGDVSSEINI---------LKKINHSNIIRLSGFCVH 425
GSV G+ K +D AVK MK D SS+ I +K +H N+IRL G C+
Sbjct: 48 GSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107
Query: 426 EGNT-----YLVYEFADNGALSDWLHSNRYQTS-DNLTWKQRVQIAYDVANALNYLHKYT 479
+ ++ F G L +L +R +T ++ + ++ D+A + YL +
Sbjct: 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---S 164
Query: 480 NPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAP 539
N ++H++L N +L ++ + +FGL++ S ++ + G R ++A
Sbjct: 165 NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG------RIAKMPVKWIAI 218
Query: 540 EYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577
E + + V T K DV+AFGV + E+ + G G QN E
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE 257
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 48/297 (16%)
Query: 380 GSVYRGSFKGDDAAVKVMKGDVS------SEINILKKINHSNIIRLSGFCVHEGN----- 428
G V+RG ++G++ AVK+ +EI + H NI+ GF +
Sbjct: 18 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAADNKDNGTW 74
Query: 429 --TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT-----NP 481
+LV ++ ++G+L D+L NRY +T + +++A A+ L +LH P
Sbjct: 75 TQLWLVSDYHEHGSLFDYL--NRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 128
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT-RHVVGTYGYMAPE 540
H++LK+ NIL+ N I + GLA H+ + + H VGT YMAPE
Sbjct: 129 AIAHRDLKSKNILVKKNGTCCIADLGLAV-----RHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 541 YIENGVIT------PKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594
+++ + + D++A G+V E+ R G + + +L Y + V + +V
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDL--VPSDPSV 239
Query: 595 REKLRGFIDPSLRNEYP-----LDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E + + LR P + MA++ + C + AR + + TLS++
Sbjct: 240 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 296
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 50 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEA 102
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 103 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 157
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 158 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 215 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 261
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 262 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 308
Query: 645 KI 646
K+
Sbjct: 309 KM 310
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 26/203 (12%)
Query: 384 RGSFKGDDAAVKVM-------KGDVSSEINILKKINHSNIIRL-SGFCVHEGNTYLVYEF 435
R G AVK+M + + +E+ I++ H N++ + + V E +++ EF
Sbjct: 65 REKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGE-ELWVLMEF 123
Query: 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL 495
GAL+D + R L +Q + V AL YLH +H+++K+ +ILL
Sbjct: 124 LQGGALTDIVSQVR------LNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILL 174
Query: 496 DTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFA 555
+ R K+++FG D ++ + +VGT +MAPE I + ++D+++
Sbjct: 175 TLDGRVKLSDFGFCAQISKDVPKR--------KXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 556 FGVVVLELLSGREAVTGDQNCEA 578
G++V+E++ G D +A
Sbjct: 227 LGIMVIEMVDGEPPYFSDSPVQA 249
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK + H NI++ G C G N L+ E+ G+L D+L ++ + +
Sbjct: 88 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID 143
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ +Q + + YL Y+H++L T NIL++ R KI +FGL + D+
Sbjct: 144 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
++ + APE + + DV++FGVV+ EL +
Sbjct: 201 XX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 48/297 (16%)
Query: 380 GSVYRGSFKGDDAAVKVMKGDVS------SEINILKKINHSNIIRLSGFCVHEGN----- 428
G V+RG ++G++ AVK+ +EI + H NI+ GF +
Sbjct: 17 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAADNKDNGTW 73
Query: 429 --TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT-----NP 481
+LV ++ ++G+L D+L NRY +T + +++A A+ L +LH P
Sbjct: 74 TQLWLVSDYHEHGSLFDYL--NRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT-RHVVGTYGYMAPE 540
H++LK+ NIL+ N I + GLA H+ + + H VGT YMAPE
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAV-----RHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 541 YIENGVIT------PKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594
+++ + + D++A G+V E+ R G + + +L Y + V + +V
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDL--VPSDPSV 238
Query: 595 REKLRGFIDPSLRNEYP-----LDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E + + LR P + MA++ + C + AR + + TLS++
Sbjct: 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 57/314 (18%)
Query: 349 GFRSAVESLTLYKFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV----------- 396
G + + L +F+ +K+ +G+F G+VY+G + + VK+
Sbjct: 1 GAMALLRILKETEFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREAT 53
Query: 397 ---MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTS 453
++ E ++ +++ ++ RL G C+ L+ + G L D++ ++
Sbjct: 54 SPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK---- 108
Query: 454 DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513
DN+ + + +A +NYL + VH++L N+L+ T KIT+FGLA+
Sbjct: 109 DNIGSQYLLNWCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 165
Query: 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572
++E E G ++ +MA E I + + T + DV+++GV V EL++ G + G
Sbjct: 166 AEEKEYHAEGGKV------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 219
Query: 573 DQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNA 632
E IS +LE+ R P + + C D ++
Sbjct: 220 IPASE-------ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADS 259
Query: 633 RPSISEVFVTLSKI 646
RP E+ + SK+
Sbjct: 260 RPKFRELIIEFSKM 273
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 30/191 (15%)
Query: 385 GSFKGDDAAVKVMKGDVSSEINILKKIN-HSNIIRLSGFCVHEGNTY--LVYEFADNGAL 441
GSF ++ V+ ++ E++IL+K++ H NII+L +E NT+ LV++ G L
Sbjct: 56 GSFSAEE--VQELREATLKEVDILRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGEL 111
Query: 442 SDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA 501
D+L L+ K+ +I + + LHK VH++LK NILLD ++
Sbjct: 112 FDYLTEKV-----TLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNI 163
Query: 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV------ITPKLDVFA 555
K+T+FG S + D E+ R V GT Y+APE IE + ++D+++
Sbjct: 164 KLTDFGF--SCQLDPGEK-------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 556 FGVVVLELLSG 566
GV++ LL+G
Sbjct: 215 TGVIMYTLLAG 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 17 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 69
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 70 YVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHK----DNIGSQYLLNWC 124
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 125 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 182 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 228
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 229 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 275
Query: 645 KI 646
K+
Sbjct: 276 KM 277
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 16 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 69 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 123
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 181 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 227
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 228 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274
Query: 645 KI 646
K+
Sbjct: 275 KM 276
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK + H NI++ G C G N L+ E+ G+L D+L ++ ++ +
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH----AERID 115
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ +Q + + YL Y+H++L T NIL++ R KI +FGL + D+
Sbjct: 116 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
++ + APE + + DV++FGVV+ EL +
Sbjct: 173 XX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 48/297 (16%)
Query: 380 GSVYRGSFKGDDAAVKVMKGDVS------SEINILKKINHSNIIRLSGFCVHEGN----- 428
G V+RG ++G++ AVK+ +EI + H NI+ GF +
Sbjct: 20 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAADNKDNGTW 76
Query: 429 --TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT-----NP 481
+LV ++ ++G+L D+L NRY +T + +++A A+ L +LH P
Sbjct: 77 TQLWLVSDYHEHGSLFDYL--NRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 130
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT-RHVVGTYGYMAPE 540
H++LK+ NIL+ N I + GLA H+ + + H VGT YMAPE
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLAV-----RHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 541 YIENGVIT------PKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594
+++ + + D++A G+V E+ R G + + +L Y + V + +V
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDL--VPSDPSV 241
Query: 595 REKLRGFIDPSLRNEYP-----LDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E + + LR P + MA++ + C + AR + + TLS++
Sbjct: 242 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 298
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 22 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 74
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 75 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 129
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 130 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 187 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 233
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 234 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 280
Query: 645 KI 646
K+
Sbjct: 281 KM 282
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 41 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 93
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 94 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 148
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 149 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 206 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 252
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 253 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 299
Query: 645 KI 646
K+
Sbjct: 300 KM 301
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 30/193 (15%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLVY-EFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 442 SDWLHSNRYQT-------SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
S +L S R + D LT + + ++ VA + +L + +H++L NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 495 LDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLD 552
L KI +FGLAR + D +G L L +MAPE I + V T + D
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK--------WMAPETIFDRVYTIQSD 228
Query: 553 VFAFGVVVLELLS 565
V++FGV++ E+ S
Sbjct: 229 VWSFGVLLWEIFS 241
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 389 GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNG 439
G+ AVK ++ D EI ILK + H NI++ G C G N L+ E+ G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 440 ALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL 499
+L D+L ++ + + + +Q + + YL Y+H++L T NIL++
Sbjct: 97 SLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENEN 149
Query: 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVV 559
R KI +FGL + D+ ++ + APE + + DV++FGVV
Sbjct: 150 RVKIGDFGLTKVLPQDKEXX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 204
Query: 560 VLELLS 565
+ EL +
Sbjct: 205 LYELFT 210
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 48/297 (16%)
Query: 380 GSVYRGSFKGDDAAVKVMKGDVS------SEINILKKINHSNIIRLSGFCVHEGN----- 428
G V+RG ++G++ AVK+ +EI + H NI+ GF +
Sbjct: 23 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAADNKDNGTW 79
Query: 429 --TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT-----NP 481
+LV ++ ++G+L D+L NRY +T + +++A A+ L +LH P
Sbjct: 80 TQLWLVSDYHEHGSLFDYL--NRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 133
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT-RHVVGTYGYMAPE 540
H++LK+ NIL+ N I + GLA H+ + + H VGT YMAPE
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLAV-----RHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 541 YIENGVIT------PKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594
+++ + + D++A G+V E+ R G + + +L Y + V + +V
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDL--VPSDPSV 244
Query: 595 REKLRGFIDPSLRNEYP-----LDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E + + LR P + MA++ + C + AR + + TLS++
Sbjct: 245 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 301
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK + H NI++ G C G N L+ E+ G+L D+L ++ + +
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID 115
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ +Q + + YL Y+H++L T NIL++ R KI +FGL + D+
Sbjct: 116 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
++ + APE + + DV++FGVV+ EL +
Sbjct: 173 XX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 10 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 62
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 63 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 117
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 118 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 175 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 221
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 222 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268
Query: 645 KI 646
K+
Sbjct: 269 KM 270
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 389 GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNG 439
G+ AVK ++ D EI ILK + H NI++ G C G N L+ E+ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 440 ALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL 499
+L D+L ++ + + + +Q + + YL Y+H++L T NIL++
Sbjct: 99 SLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENEN 151
Query: 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVV 559
R KI +FGL + D+ ++ + APE + + DV++FGVV
Sbjct: 152 RVKIGDFGLTKVLPQDKEXX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 206
Query: 560 VLELLS 565
+ EL +
Sbjct: 207 LYELFT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK + H NI++ G C G N L+ E+ G+L D+L ++ + +
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID 112
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ +Q + + YL Y+H++L T NIL++ R KI +FGL + D+
Sbjct: 113 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
++ + APE + + DV++FGVV+ EL +
Sbjct: 170 -----FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 130/308 (42%), Gaps = 43/308 (13%)
Query: 307 RNSKKNPTPVLTPGRVPPPKTPLDCADYSLFPQASNSLSHPQGFRSAVESLTLYKFQDLK 366
R ++N P PG P + P + + F A + P RS +++ +K
Sbjct: 30 RARQENGMPEKPPGPRSPQREPQRVS-HEQFRAALQLVVDPGDPRSYLDNF-------IK 81
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSS---------EINILKKINHSNII 417
I GS G V + + V V K D+ E+ I++ H N++
Sbjct: 82 IGEGS-------TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV 134
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK 477
+ + ++V EF + GAL+D + T + +Q + V AL+ LH
Sbjct: 135 EMYNSYLVGDELWVVMEFLEGGALTDIV------THTRMNEEQIAAVCLAVLQALSVLHA 188
Query: 478 YTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYM 537
+H+++K+ +ILL + R K+++FG + + + +VGT +M
Sbjct: 189 QG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--------VPRRKXLVGTPYWM 237
Query: 538 APEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYAS--ISRVLEESNVR 595
APE I P++D+++ G++V+E++ G + +A + R+ V
Sbjct: 238 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS 297
Query: 596 EKLRGFID 603
L+GF+D
Sbjct: 298 PSLKGFLD 305
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ ++G+F G+VY+G + + VK+ ++ E
Sbjct: 23 EFKKIKVLSSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 76 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 130
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 188 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 234
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 235 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 281
Query: 645 KI 646
K+
Sbjct: 282 KM 283
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 18 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 71 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 125
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 183 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 229
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 230 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 276
Query: 645 KI 646
K+
Sbjct: 277 KM 278
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK + H NI++ G C G N L+ E+ G+L D+L ++ + +
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID 112
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ +Q + + YL Y+H++L T NIL++ R KI +FGL + D+
Sbjct: 113 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
++ + APE + + DV++FGVV+ EL +
Sbjct: 170 XX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + ++ E+NIL++I H NII L ++ + L+ E G L D+L T D
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE 116
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
T Q + + ++YLH + H +LK NI LLD N+ R K+ +FG+A
Sbjct: 117 AT-----QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 168
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
E+ +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 169 IEAGNE---------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Query: 572 GDQNCE 577
G+ E
Sbjct: 220 GETKQE 225
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK + H NI++ G C G N L+ E+ G+L D+L ++ + +
Sbjct: 64 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID 119
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ +Q + + YL Y+H++L T NIL++ R KI +FGL + D+
Sbjct: 120 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 176
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
++ + APE + + DV++FGVV+ EL +
Sbjct: 177 XX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK + H NI++ G C G N L+ E+ G+L D+L ++ + +
Sbjct: 62 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID 117
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ +Q + + YL Y+H++L T NIL++ R KI +FGL + D+
Sbjct: 118 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 174
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
++ + APE + + DV++FGVV+ EL +
Sbjct: 175 XX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 389 GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNG 439
G+ AVK ++ D EI ILK + H NI++ G C G N L+ E+ G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 440 ALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL 499
+L D+L ++ + + + +Q + + YL Y+H++L T NIL++
Sbjct: 98 SLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENEN 150
Query: 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVV 559
R KI +FGL + D+ ++ + APE + + DV++FGVV
Sbjct: 151 RVKIGDFGLTKVLPQDKEXX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 205
Query: 560 VLELLS 565
+ EL +
Sbjct: 206 LYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK + H NI++ G C G N L+ E+ G+L D+L ++ + +
Sbjct: 61 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID 116
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ +Q + + YL Y+H++L T NIL++ R KI +FGL + D+
Sbjct: 117 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 173
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
++ + APE + + DV++FGVV+ EL +
Sbjct: 174 XX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 19 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 72 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 126
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 184 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 230
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 231 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 277
Query: 645 KI 646
K+
Sbjct: 278 KM 279
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 51/312 (16%)
Query: 350 FRSAVESLTL-YKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKGDVSS 403
F+ A+ S T Y+ Q +I G E + G V++G + + A+K K S
Sbjct: 22 FQGAMGSSTRDYEIQRERIELGRCIGEGQF-GDVHQGIYMSPENPALAVAIKTCKNCTSD 80
Query: 404 EIN--------ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
+ +++ +H +I++L G + E +++ E G L +L +Y +
Sbjct: 81 SVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKY----S 135
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515
L + AY ++ AL YL + +VH+++ N+L+ +N K+ +FGL+R E
Sbjct: 136 LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 192
Query: 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE-LLSGREAVTGDQ 574
+ + G + +MAPE I T DV+ FGV + E L+ G + G +
Sbjct: 193 TYYKASKGKLPIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 245
Query: 575 NCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARP 634
N + G I+ R P + ++ L C A+D + RP
Sbjct: 246 N--------------------NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRP 285
Query: 635 SISEVFVTLSKI 646
+E+ LS I
Sbjct: 286 RFTELKAQLSTI 297
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK + H NI++ G C G N L+ E+ G+L D+L ++ + +
Sbjct: 63 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID 118
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ +Q + + YL Y+H++L T NIL++ R KI +FGL + D+
Sbjct: 119 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 175
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
++ + APE + + DV++FGVV+ EL +
Sbjct: 176 XX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 53 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 107
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI NFG + A S
Sbjct: 108 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR 164
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 165 RTT----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 215 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 253
Query: 637 SEVF 640
EV
Sbjct: 254 REVL 257
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 16 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 69 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHK----DNIGSQYLLNWC 123
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 181 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 227
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 228 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274
Query: 645 KI 646
K+
Sbjct: 275 KM 276
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 19 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 72 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 126
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 184 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 230
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 231 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 277
Query: 645 KI 646
K+
Sbjct: 278 KM 279
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 30/191 (15%)
Query: 385 GSFKGDDAAVKVMKGDVSSEINILKKIN-HSNIIRLSGFCVHEGNTY--LVYEFADNGAL 441
GSF ++ V+ ++ E++IL+K++ H NII+L +E NT+ LV++ G L
Sbjct: 56 GSFSAEE--VQELREATLKEVDILRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGEL 111
Query: 442 SDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA 501
D+L L+ K+ +I + + LHK VH++LK NILLD ++
Sbjct: 112 FDYLTEKV-----TLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNI 163
Query: 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV------ITPKLDVFA 555
K+T+FG S + D E+ R V GT Y+APE IE + ++D+++
Sbjct: 164 KLTDFGF--SCQLDPGEK-------LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 556 FGVVVLELLSG 566
GV++ LL+G
Sbjct: 215 TGVIMYTLLAG 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + ++ E+NIL++I H NII L ++ + L+ E G L D+L T D
Sbjct: 50 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE 109
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
T Q + + ++YLH + H +LK NI LLD N+ R K+ +FG+A
Sbjct: 110 AT-----QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
E+ +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 162 IEAGNE---------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 212
Query: 572 GDQNCE 577
G+ E
Sbjct: 213 GETKQE 218
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 389 GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNG 439
G+ AVK ++ D EI ILK + H NI++ G C G N L+ EF G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 440 ALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL 499
+L ++L ++ + + + +Q + + YL Y+H++L T NIL++
Sbjct: 102 SLREYLQKHK----ERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENEN 154
Query: 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVV 559
R KI +FGL + D+ ++ + APE + + DV++FGVV
Sbjct: 155 RVKIGDFGLTKVLPQDKEXX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 209
Query: 560 VLELLS 565
+ EL +
Sbjct: 210 LYELFT 215
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 135
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H +H+++K N+LL + KI +FG + A S +
Sbjct: 136 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD- 191
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 192 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 240
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 241 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 281
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 29/268 (10%)
Query: 389 GDDAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADN 438
G+ AVK +K D EI+IL+ + H +II+ G C G + LV E+
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498
G+L D+L + ++ Q + A + + YLH Y+H++L N+LLD +
Sbjct: 120 GSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDND 170
Query: 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGV 558
KI +FGLA++ +G ++ + APE ++ DV++FGV
Sbjct: 171 RLVKIGDFGLAKAV-----PEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGV 225
Query: 559 VVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSM 618
+ ELL+ D + + + + + +L ++ R P +
Sbjct: 226 TLYELLT-----HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEV 280
Query: 619 AQLAKNCTAHDLNARPSISEVFVTLSKI 646
L KNC + + RP+ + L +
Sbjct: 281 YHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 105
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 106 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ + GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 163 RTE----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 213 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 251
Query: 637 SEVF 640
EV
Sbjct: 252 REVL 255
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 18 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 71 YVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHK----DNIGSQYLLNWC 125
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FG A+ ++E E G +
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 183 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 229
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + + C D ++RP E+ + S
Sbjct: 230 ISSILEKGE-------------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 276
Query: 645 KI 646
K+
Sbjct: 277 KM 278
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK + H NI++ G C G N L+ E+ G+L D+L ++ + +
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID 130
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ +Q + + YL Y+H++L T NIL++ R KI +FGL + D+
Sbjct: 131 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
++ + APE + + DV++FGVV+ EL +
Sbjct: 188 XX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQR 114
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX- 170
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 171 ---------LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 219
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 220 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 260
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 23 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 76 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 130
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FGLA+ ++E E G +
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 188 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 234
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 235 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 281
Query: 645 KI 646
K+
Sbjct: 282 KM 283
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 38/222 (17%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGD-------------------VSSEINI 407
I F+EE ++ + +G+F VKV+ G + E I
Sbjct: 4 ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI 63
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+ + H NI+RL EG+ YL+++ G L + + + Y + + +
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQ 118
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA---KITNFGLARSAESDEHEQGGYGL 524
+ A+ + H+ VH+NLK N+LL + L+ K+ +FGLA E ++ G+
Sbjct: 119 ILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA- 174
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
GT GY++PE + +D++A GV++ LL G
Sbjct: 175 -------GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 108
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI NFG + A S
Sbjct: 109 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR 165
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 166 RTT----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 216 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 254
Query: 637 SEVF 640
EV
Sbjct: 255 REVL 258
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + ++ E+NIL++I H NII L ++ + L+ E G L D+L T D
Sbjct: 71 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE 130
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
T Q + + ++YLH + H +LK NI LLD N+ R K+ +FG+A
Sbjct: 131 AT-----QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 182
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
E+ +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 183 IEAGNE---------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 233
Query: 572 GDQNCE 577
G+ E
Sbjct: 234 GETKQE 239
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-KGDVSS--------EINILKKINHSNII 417
I G+F+ + + R G + AVK++ K ++S E+ I+K +NH NI+
Sbjct: 15 IGKGNFA-----KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 69
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK 477
+L E YLV E+A G + D+L ++ + K R + +A+ Y H+
Sbjct: 70 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----QIVSAVQYCHQ 124
Query: 478 YTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYM 537
VH++LK N+LLD ++ KI +FG + + +G +L G+ Y
Sbjct: 125 ---KFIVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLDT-FCGSPPYA 172
Query: 538 APEYIENGVIT-PKLDVFAFGVVVLELLSG 566
APE + P++DV++ GV++ L+SG
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQR 114
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 170
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 171 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 219
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 220 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 260
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK + H NI++ G C G N L+ E+ G+L D+L ++ + +
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID 130
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ +Q + + YL Y+H++L T NIL++ R KI +FGL + D+
Sbjct: 131 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
++ + APE + + DV++FGVV+ EL +
Sbjct: 188 XX-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 360 YKFQDLKI----ATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDV----------SSEI 405
Y QD +I TGSF + I R G A+KV+K ++ + E
Sbjct: 3 YSLQDFQILRTLGTGSFGRVHLI-----RSRHNGRYYAMKVLKKEIVVRLKQVEHTNDER 57
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
+L + H IIR+ G +++ ++ + G L L + Q N K A
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKF---YA 112
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+V AL YLH + ++++LK NILLD N KIT+FG A+ Y
Sbjct: 113 AEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAK-----------YVPD 158
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T + GT Y+APE + +D ++FG+++ E+L+G
Sbjct: 159 VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 112
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S +
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD- 168
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 169 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 217
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 218 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 258
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 30/193 (15%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLVY-EFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 442 SDWLHSNRYQT-------SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
S +L S R + D LT + + ++ VA + +L + +H++L NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 495 LDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLD 552
L KI +FGLAR + D +G L L +MAPE I + V T + D
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK--------WMAPETIFDRVYTIQSD 228
Query: 553 VFAFGVVVLELLS 565
V++FGV++ E+ S
Sbjct: 229 VWSFGVLLWEIFS 241
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 18 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 71 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 125
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FG A+ ++E E G +
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 183 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 229
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + + C D ++RP E+ + S
Sbjct: 230 ISSILEKGE-------------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 276
Query: 645 KI 646
K+
Sbjct: 277 KM 278
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWK 459
+ E+ I + H NI+RL G+ YL+ E+A G + L +R+ T+
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY- 117
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
++ANAL+Y H + +H+++K N+LL +N KI +FG + A S +
Sbjct: 118 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT 169
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAE 579
+ GT Y+ PE IE + K+D+++ GV+ E L G E
Sbjct: 170 ----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET- 218
Query: 580 LLYASISRV 588
Y ISRV
Sbjct: 219 --YRRISRV 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQ 463
E +IL +NH +++L EG YL+ +F G L L T +++ +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF----- 134
Query: 464 IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYG 523
++A L++LH ++++LK NILLD K+T+FGL S E+ +HE+ Y
Sbjct: 135 YLAELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGL--SKEAIDHEKKAYS 189
Query: 524 LQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
GT YMAPE + + D +++GV++ E+L+G G E
Sbjct: 190 F------CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKE 237
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLVY-EFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 442 SDWLHSNR-----YQTS------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
S +L S R Y+ + D LT + + ++ VA + +L + +H++L
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 491 SNILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT 548
NILL KI +FGLAR + D +G L L +MAPE I + V T
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK--------WMAPETIFDRVYT 228
Query: 549 PKLDVFAFGVVVLELLS 565
+ DV++FGV++ E+ S
Sbjct: 229 IQSDVWSFGVLLWEIFS 245
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMK------GDVSSEINILKKINHSNIIR 418
+I +G F G V+ G + D A+K +K D E ++ K++H +++
Sbjct: 34 EIGSGQF-------GLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY 478
L G C+ + LV+EF ++G LSD+L + R + + + DV + YL +
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 479 TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT---YG 535
+H++L N L+ N K+++FG+ R D++ GT
Sbjct: 143 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----------TGTKFPVK 189
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ +PE + K DV++FGV++ E+ S
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 50/301 (16%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKGDVSSEIN-------- 406
Y+ Q +I G E + G V++G + + A+K K S +
Sbjct: 5 YEIQRERIELGRCIGEGQF-GDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
+++ +H +I++L G + E +++ E G L +L +Y +L + AY
Sbjct: 64 TMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKY----SLDLASLILYAY 118
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
++ AL YL + +VH+++ N+L+ +N K+ +FGL+R E + + G
Sbjct: 119 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE-LLSGREAVTGDQNCEAELLYASI 585
+ +MAPE I T DV+ FGV + E L+ G + G +N
Sbjct: 176 IK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---------- 218
Query: 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645
+ G I+ R P + ++ L C A+D + RP +E+ LS
Sbjct: 219 ----------NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 268
Query: 646 I 646
I
Sbjct: 269 I 269
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 110
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S +
Sbjct: 111 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT- 166
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 167 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 215
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 216 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 256
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 50/301 (16%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKGDVSSEIN-------- 406
Y+ Q +I G E + G V++G + + A+K K S +
Sbjct: 5 YEIQRERIELGRCIGEGQF-GDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
+++ +H +I++L G + E +++ E G L +L +Y +L + AY
Sbjct: 64 TMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKY----SLDLASLILYAY 118
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
++ AL YL + +VH+++ N+L+ +N K+ +FGL+R E + + G
Sbjct: 119 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE-LLSGREAVTGDQNCEAELLYASI 585
+ +MAPE I T DV+ FGV + E L+ G + G +N
Sbjct: 176 IK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---------- 218
Query: 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645
+ G I+ R P + ++ L C A+D + RP +E+ LS
Sbjct: 219 ----------NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 268
Query: 646 I 646
I
Sbjct: 269 I 269
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLVY-EFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 442 SDWLHSNR-----YQTS------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
S +L S R Y+ + D LT + + ++ VA + +L + +H++L
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 491 SNILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT 548
NILL KI +FGLAR + D +G L L +MAPE I + V T
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLK--------WMAPETIFDRVYT 228
Query: 549 PKLDVFAFGVVVLELLS 565
+ DV++FGV++ E+ S
Sbjct: 229 IQSDVWSFGVLLWEIFS 245
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 50/301 (16%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKGDVSSEIN-------- 406
Y+ Q +I G E + G V++G + + A+K K S +
Sbjct: 10 YEIQRERIELGRCIGEGQF-GDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
+++ +H +I++L G + E +++ E G L +L +Y +L + AY
Sbjct: 69 TMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKY----SLDLASLILYAY 123
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
++ AL YL + +VH+++ N+L+ +N K+ +FGL+R E + + G
Sbjct: 124 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 180
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE-LLSGREAVTGDQNCEAELLYASI 585
+ +MAPE I T DV+ FGV + E L+ G + G +N
Sbjct: 181 IK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---------- 223
Query: 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645
+ G I+ R P + ++ L C A+D + RP +E+ LS
Sbjct: 224 ----------NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 273
Query: 646 I 646
I
Sbjct: 274 I 274
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 43/213 (20%)
Query: 377 RIQGSVYRGSFK----------GDDAAVKVMKG---------DVSSEINILKKINHSNII 417
R+Q ++ +G+F G + AVK++ + E+ I+K +NH NI+
Sbjct: 18 RLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWL--HSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
+L E YLV E+A G + D+L H + ++Q + +A+ Y
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IVSAVQYC 130
Query: 476 H-KYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H KY VH++LK N+LLD ++ KI +FG S+E G G+
Sbjct: 131 HQKYI----VHRDLKAENLLLDGDMNIKIADFGF-----SNEFTVGNK----LDTFCGSP 177
Query: 535 GYMAPEYIENGVIT-PKLDVFAFGVVVLELLSG 566
Y APE + P++DV++ GV++ L+SG
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 50/301 (16%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKGDVSSEIN-------- 406
Y+ Q +I G E + G V++G + + A+K K S +
Sbjct: 2 YEIQRERIELGRCIGEGQF-GDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
+++ +H +I++L G + E +++ E G L +L +Y +L + AY
Sbjct: 61 TMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKY----SLDLASLILYAY 115
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
++ AL YL + +VH+++ N+L+ +N K+ +FGL+R E + + G
Sbjct: 116 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 172
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE-LLSGREAVTGDQNCEAELLYASI 585
+ +MAPE I T DV+ FGV + E L+ G + G +N
Sbjct: 173 IK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---------- 215
Query: 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645
+ G I+ R P + ++ L C A+D + RP +E+ LS
Sbjct: 216 ----------NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 265
Query: 646 I 646
I
Sbjct: 266 I 266
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 110/250 (44%), Gaps = 45/250 (18%)
Query: 382 VYRGSFKGDDA--AVKVMKGDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLVYE 434
VYR KG A+KV+K V +EI +L +++H NII+L LV E
Sbjct: 69 VYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128
Query: 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
G L D + Y + + + A+ YLH+ VH++LK N+L
Sbjct: 129 LVTGGELFDRIVEKGYYSE-----RDAADAVKQILEAVAYLHENG---IVHRDLKPENLL 180
Query: 495 LDT---NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL 551
T + KI +FGL++ E H+ L + V GT GY APE + P++
Sbjct: 181 YATPAPDAPLKIADFGLSKIVE---HQV------LMKTVCGTPGYCAPEILRGCAYGPEV 231
Query: 552 DVFAFGVVVLELLSGREAV---TGDQ-------NCEAELLYASISRVLEES--NVREKLR 599
D+++ G++ LL G E GDQ NCE Y IS +E N ++ +R
Sbjct: 232 DMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE----YYFISPWWDEVSLNAKDLVR 287
Query: 600 GFI--DPSLR 607
I DP R
Sbjct: 288 KLIVLDPKKR 297
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL--HSNRYQTSDNLTWKQR 461
E+ I+K +NH NI++L E YL+ E+A G + D+L H + ++Q
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ- 119
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
+ +A+ Y H+ VH++LK N+LLD ++ KI +FG S+E GG
Sbjct: 120 ------IVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGF-----SNEFTVGG 165
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVIT-PKLDVFAFGVVVLELLSG 566
G+ Y APE + P++DV++ GV++ L+SG
Sbjct: 166 K----LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K+NH NI+R G +
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSL 118
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 175
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMP 228
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG---------DVSSEINILKKINHSNII 417
I G+F+ + + R G + A+K++ + E+ I+K +NH NI+
Sbjct: 23 IGKGNFA-----KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWL--HSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
+L E YL+ E+A G + D+L H + ++Q + +A+ Y
Sbjct: 78 KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ-------IVSAVQYC 130
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
H+ VH++LK N+LLD ++ KI +FG S+E GG G
Sbjct: 131 HQ---KRIVHRDLKAENLLLDADMNIKIADFGF-----SNEFTVGGK----LDAFCGAPP 178
Query: 536 YMAPEYIENGVIT-PKLDVFAFGVVVLELLSG 566
Y APE + P++DV++ GV++ L+SG
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLVY-EFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 442 SDWLHSNR-----YQTS------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
S +L S R Y+ + D LT + + ++ VA + +L + +H++L
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 491 SNILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT 548
NILL KI +FGLAR + D +G L L +MAPE I + V T
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK--------WMAPETIFDRVYT 219
Query: 549 PKLDVFAFGVVVLELLS 565
+ DV++FGV++ E+ S
Sbjct: 220 IQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLVY-EFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 442 SDWLHSNR-----YQTS------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
S +L S R Y+ + D LT + + ++ VA + +L + +H++L
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 491 SNILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT 548
NILL KI +FGLAR + D +G L L +MAPE I + V T
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK--------WMAPETIFDRVYT 219
Query: 549 PKLDVFAFGVVVLELLS 565
+ DV++FGV++ E+ S
Sbjct: 220 IQSDVWSFGVLLWEIFS 236
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K+NH NI+R G +
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSL 104
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 161
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMP 214
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 356 SLTLYKFQDLK----IATGSFSEENRIQGSVYRGSFKGDDAAVKVM------------KG 399
L + K +LK + +G+F G+VY+G + + VK+ K
Sbjct: 8 QLRILKETELKRVKVLGSGAF-------GTVYKGIWVPEGETVKIPVAIKILNETTGPKA 60
Query: 400 DVS--SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
+V E I+ ++H +++RL G C+ LV + +G L +++H ++ L
Sbjct: 61 NVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLL 119
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
VQIA + YL + VH++L N+L+ + KIT+FGLAR E DE
Sbjct: 120 LNWCVQIA----KGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
E G ++ +MA E I T + DV+++GV + EL++
Sbjct: 173 EYNADGGKM------PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 50/301 (16%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKGDVSSEIN-------- 406
Y+ Q +I G E + G V++G + + A+K K S +
Sbjct: 7 YEIQRERIELGRCIGEGQF-GDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
+++ +H +I++L G + E +++ E G L +L +Y +L + AY
Sbjct: 66 TMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKY----SLDLASLILYAY 120
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
++ AL YL + +VH+++ N+L+ +N K+ +FGL+R E + + G
Sbjct: 121 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 177
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE-LLSGREAVTGDQNCEAELLYASI 585
+ +MAPE I T DV+ FGV + E L+ G + G +N
Sbjct: 178 IK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---------- 220
Query: 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645
+ G I+ R P + ++ L C A+D + RP +E+ LS
Sbjct: 221 ----------NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 270
Query: 646 I 646
I
Sbjct: 271 I 271
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 36/212 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-KGDVSS--------EINILKKINHSNII 417
I G+F+ + + R G + AVK++ K ++S E+ I+K +NH NI+
Sbjct: 22 IGKGNFA-----KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWL--HSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
+L E YLV E+A G + D+L H + ++Q + +A+ Y
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IVSAVQYC 129
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
H+ VH++LK N+LLD ++ KI +FG + + +G +L G+
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLDT-FCGSPP 177
Query: 536 YMAPEYIENGVIT-PKLDVFAFGVVVLELLSG 566
Y APE + P++DV++ GV++ L+SG
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 128/304 (42%), Gaps = 65/304 (21%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKV---MKGDVSSEINILKK------------ 410
+I G F G V++G D + V + + GD E +++K
Sbjct: 26 QIGKGGF-------GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 411 -INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVA 469
+NH NI++L G +V EF G L L + + W ++++ D+A
Sbjct: 79 NLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIA 132
Query: 470 NALNYLHKYTNPPYVHKNLKTSNIL---LDTN--LRAKITNFGLARSAESDEHEQGGYGL 524
+ Y+ NPP VH++L++ NI LD N + AK+ +FG +++ H G
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG---TSQQSVHSVSG--- 185
Query: 525 QLTRHVVGTYGYMAPEYI--ENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582
++G + +MAPE I E T K D ++F +++ +L+G E Y
Sbjct: 186 -----LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-------EYSY 233
Query: 583 ASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642
I + + +RE+ LR P D + + + C + D RP S +
Sbjct: 234 GKIKFI---NMIREE-------GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 643 LSKI 646
LS++
Sbjct: 284 LSEL 287
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 36/212 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-KGDVSS--------EINILKKINHSNII 417
I G+F+ + + R G + AVK++ K ++S E+ I+K +NH NI+
Sbjct: 22 IGKGNFA-----KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWL--HSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
+L E YLV E+A G + D+L H + ++Q + +A+ Y
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IVSAVQYC 129
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
H+ VH++LK N+LLD ++ KI +FG + + +G +L G+
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLDT-FCGSPP 177
Query: 536 YMAPEYIENGVIT-PKLDVFAFGVVVLELLSG 566
Y APE + P++DV++ GV++ L+SG
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 53 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 107
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 108 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 164
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 165 RXX----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 215 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 253
Query: 637 SEVF 640
EV
Sbjct: 254 REVL 257
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 34/210 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKG------DVSSEINILKKINHSNIIR 418
+I +G F G V+ G + D A+K ++ D E ++ K++H +++
Sbjct: 14 EIGSGQF-------GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY 478
L G C+ + LV+EF ++G LSD+L + R + + + DV + YL +
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 479 TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT---YG 535
+ +H++L N L+ N K+++FG+ R D++ GT
Sbjct: 123 S---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----------TGTKFPVK 169
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ +PE + K DV++FGV++ E+ S
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 50/301 (16%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKGDVSSEIN-------- 406
Y+ Q +I G E + G V++G + + A+K K S +
Sbjct: 8 YEIQRERIELGRCIGEGQF-GDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
+++ +H +I++L G + E +++ E G L +L +Y +L + AY
Sbjct: 67 TMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKY----SLDLASLILYAY 121
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
++ AL YL + +VH+++ N+L+ +N K+ +FGL+R E + + G
Sbjct: 122 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 178
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE-LLSGREAVTGDQNCEAELLYASI 585
+ +MAPE I T DV+ FGV + E L+ G + G +N
Sbjct: 179 IK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---------- 221
Query: 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645
+ G I+ R P + ++ L C A+D + RP +E+ LS
Sbjct: 222 ----------NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 271
Query: 646 I 646
I
Sbjct: 272 I 272
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 28/212 (13%)
Query: 364 DLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG--------DVSSEINILKKINHSN 415
D+++ G+F ++ VYR K D A+KV+K ++ E I+ ++++
Sbjct: 15 DIELGCGNFGS---VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY 71
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
I+RL G C E LV E A G L +L R + + ++ + V+ + YL
Sbjct: 72 IVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYL 126
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY- 534
+ +VH++L N+LL AKI++FGL+++ +D+ T G +
Sbjct: 127 EEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS-------YYTARSAGKWP 176
Query: 535 -GYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ APE I + + DV+++GV + E LS
Sbjct: 177 LKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 36 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 95
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 96 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 152
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 153 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMP 205
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLVY-EFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 442 SDWLHSNR-----YQTS------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
S +L S R Y+ + D LT + + ++ VA + +L + +H++L
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 491 SNILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT 548
NILL KI +FGLAR + D +G L L +MAPE I + V T
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK--------WMAPETIFDRVYT 219
Query: 549 PKLDVFAFGVVVLELLS 565
+ DV++FGV++ E+ S
Sbjct: 220 IQSDVWSFGVLLWEIFS 236
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 36/212 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-KGDVSS--------EINILKKINHSNII 417
I G+F+ + + R G + AV+++ K ++S E+ I+K +NH NI+
Sbjct: 22 IGKGNFA-----KVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWL--HSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
+L E YLV E+A G + D+L H + ++Q + +A+ Y
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IVSAVQYC 129
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
H+ VH++LK N+LLD ++ KI +FG + + +G +L G+
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLD-EFCGSPP 177
Query: 536 YMAPEYIENGVIT-PKLDVFAFGVVVLELLSG 566
Y APE + P++DV++ GV++ L+SG
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 105
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 106 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 163 RTT----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 213 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 251
Query: 637 SEVF 640
EV
Sbjct: 252 REVL 255
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 77 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 131
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H +H+++K N+LL + KI +FG + A S
Sbjct: 132 DEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 188
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 189 RTT----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 239 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 277
Query: 637 SEVF 640
EV
Sbjct: 278 REVL 281
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLV-YEFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 442 SDWLHSNR-----YQTS------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
S +L S R Y+ + D LT + + ++ VA + +L + +H++L
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 491 SNILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT 548
NILL KI +FGLAR + D +G L L +MAPE I + V T
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK--------WMAPETIFDRVYT 228
Query: 549 PKLDVFAFGVVVLELLS 565
+ DV++FGV++ E+ S
Sbjct: 229 IQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLVY-EFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 442 SDWLHSNR-----YQTS------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
S +L S R Y+ + D LT + + ++ VA + +L + +H++L
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 213
Query: 491 SNILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT 548
NILL KI +FGLAR + D +G L L +MAPE I + V T
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK--------WMAPETIFDRVYT 265
Query: 549 PKLDVFAFGVVVLELLS 565
+ DV++FGV++ E+ S
Sbjct: 266 IQSDVWSFGVLLWEIFS 282
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 50/298 (16%)
Query: 380 GSVYRGSFKGDDAAVKVMKGD------VSSEINILKKINHSNIIRLSGFCVHEGNT---- 429
G V+RGS++G++ AVK+ +E+ + H NI+ GF + +
Sbjct: 22 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENIL---GFIASDMTSRHSS 78
Query: 430 ---YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH-----KYTNP 481
+L+ + + G+L D+L T L +I +A+ L +LH P
Sbjct: 79 TQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQGKP 132
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRH-VVGTYGYMAPE 540
H++LK+ NIL+ N + I + GLA H Q L + + VGT YMAPE
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVM-----HSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 541 YIENGVIT------PKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594
++ + ++D++AFG+V+ E+ R V+ N E V+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS---NGIVEDYKPPFYDVVPNDPS 242
Query: 595 REKLRGFI-----DPSLRNEYPLDLAF-SMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E +R + P++ N + D S+A+L K C + +AR + + TL+KI
Sbjct: 243 FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 106/225 (47%), Gaps = 47/225 (20%)
Query: 368 ATGSFSEENRIQGSVYRGSF----------KGDDAAVKVM-------KGDVSS---EINI 407
+T FS+ + Q + +GSF G + AVKV+ K D S E+ +
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAY 466
LK+++H NI +L F +G YLV E G L D + S R+ D +I
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA------ARIIR 133
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILL-----DTNLRAKITNFGLARSAESDEHEQGG 521
V + + Y HK VH++LK N+LL D N+R I +FGL+ E+ +
Sbjct: 134 QVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIR--IIDFGLSTHFEASKK---- 184
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+ +GT Y+APE + +G K DV++ GV++ LLSG
Sbjct: 185 -----XKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 103
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 160
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 161 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMP 213
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 103
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 104 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 160
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 161 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMP 213
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 61 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 120
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 121 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 177
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 178 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMP 230
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 110
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 111 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD- 166
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 167 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 215
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 216 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 256
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDN 455
++ + E+ I + H NI+RL G+ YL+ E+A G + L +R+
Sbjct: 55 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT 114
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515
T+ ++ANAL+Y H + +H+++K N+LL +N KI +FG + A S
Sbjct: 115 ATY------ITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS 165
Query: 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQN 575
+ GT Y+ PE IE + K+D+++ GV+ E L G
Sbjct: 166 RRTT----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTY 215
Query: 576 CEAELLYASISRV 588
E Y ISRV
Sbjct: 216 QET---YRRISRV 225
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 114
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD- 170
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 171 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 219
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 220 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 105
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 106 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 163 RTD----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 213 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 251
Query: 637 SEVF 640
EV
Sbjct: 252 REVL 255
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 118
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 119 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 175
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMP 228
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 50/298 (16%)
Query: 380 GSVYRGSFKGDDAAVKVMKGD------VSSEINILKKINHSNIIRLSGFCVHEGNT---- 429
G V+RGS++G++ AVK+ +E+ + H NI+ GF + +
Sbjct: 51 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENIL---GFIASDMTSRHSS 107
Query: 430 ---YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH-----KYTNP 481
+L+ + + G+L D+L T L +I +A+ L +LH P
Sbjct: 108 TQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQGKP 161
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRH-VVGTYGYMAPE 540
H++LK+ NIL+ N + I + GLA H Q L + + VGT YMAPE
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLAVM-----HSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 541 YIENGVIT------PKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594
++ + ++D++AFG+V+ E+ R V+ N E V+
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS---NGIVEDYKPPFYDVVPNDPS 271
Query: 595 REKLRGFI-----DPSLRNEYPLDLAF-SMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E +R + P++ N + D S+A+L K C + +AR + + TL+KI
Sbjct: 272 FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 329
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 36/212 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-KGDVSS--------EINILKKINHSNII 417
I G+F+ + + R G + AVK++ K ++S E+ I+K +NH NI+
Sbjct: 22 IGKGNFA-----KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWL--HSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
+L E YLV E+A G + D+L H + ++Q + +A+ Y
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IVSAVQYC 129
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
H+ VH++LK N+LLD ++ KI +FG + + +G +L G
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLD-AFCGAPP 177
Query: 536 YMAPEYIENGVIT-PKLDVFAFGVVVLELLSG 566
Y APE + P++DV++ GV++ L+SG
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLV-YEFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 442 SDWLHSNR-----YQTS------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
S +L S R Y+ + D LT + + ++ VA + +L + +H++L
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 178
Query: 491 SNILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT 548
NILL KI +FGLAR + D +G L L +MAPE I + V T
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK--------WMAPETIFDRVYT 230
Query: 549 PKLDVFAFGVVVLELLS 565
+ DV++FGV++ E+ S
Sbjct: 231 IQSDVWSFGVLLWEIFS 247
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 112
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA- 168
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 169 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 217
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 218 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 109
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 110 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX- 165
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 166 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 214
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 215 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 255
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 112
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX- 168
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 169 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 217
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 218 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 258
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 50/298 (16%)
Query: 380 GSVYRGSFKGDDAAVKVMKGD------VSSEINILKKINHSNIIRLSGFCVHEGNT---- 429
G V+RGS++G++ AVK+ +E+ + H NI+ GF + +
Sbjct: 22 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENIL---GFIASDMTSRHSS 78
Query: 430 ---YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH-----KYTNP 481
+L+ + + G+L D+L T L +I +A+ L +LH P
Sbjct: 79 TQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQGKP 132
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRH-VVGTYGYMAPE 540
H++LK+ NIL+ N + I + GLA H Q L + + VGT YMAPE
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVM-----HSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 541 YIENGVIT------PKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594
++ + ++D++AFG+V+ E+ R V+ N E V+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS---NGIVEDYKPPFYDVVPNDPS 242
Query: 595 REKLRGFI-----DPSLRNEYPLDLAF-SMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E +R + P++ N + D S+A+L K C + +AR + + TL+KI
Sbjct: 243 FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLVY-EFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 442 SDWLHSNR-----YQTS------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
S +L S R Y+ + D LT + + ++ VA + +L + +H++L
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 491 SNILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT 548
NILL KI +FGLAR + D +G L L +MAPE I + V T
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK--------WMAPETIFDRVYT 219
Query: 549 PKLDVFAFGVVVLELLS 565
+ DV++FGV++ E+ S
Sbjct: 220 IQSDVWSFGVLLWEIFS 236
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKG------DVSSEINILKKINHSNIIR 418
+I +G F G V+ G + D A+K ++ D E ++ K++H +++
Sbjct: 12 EIGSGQF-------GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY 478
L G C+ + LV+EF ++G LSD+L + R + + + DV + YL +
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 479 TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT---YG 535
+H++L N L+ N K+++FG+ R D++ GT
Sbjct: 121 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----------TGTKFPVK 167
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ +PE + K DV++FGV++ E+ S
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 114
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 170
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 171 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 219
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 220 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 260
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKG------DVSSEINILKKINHSNIIR 418
+I +G F G V+ G + D A+K ++ D E ++ K++H +++
Sbjct: 14 EIGSGQF-------GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY 478
L G C+ + LV+EF ++G LSD+L + R + + + DV + YL +
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 479 TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT---YG 535
+H++L N L+ N K+++FG+ R D++ GT
Sbjct: 123 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----------TGTKFPVK 169
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ +PE + K DV++FGV++ E+ S
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 104
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 161
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMP 214
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 20 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 72
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 73 YVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHK----DNIGSQYLLNWC 127
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FG A+ ++E E G +
Sbjct: 128 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 185 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 231
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 232 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 278
Query: 645 KI 646
K+
Sbjct: 279 KM 280
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 51 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 110
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 111 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 167
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 168 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMP 220
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 105
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 106 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 163 RTD----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 213 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 251
Query: 637 SEVF 640
EV
Sbjct: 252 REVL 255
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 99/202 (49%), Gaps = 19/202 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQ 463
E+ I++ H N++ + + ++V EF + GAL+D + T + +Q
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV------THTRMNEEQIAA 131
Query: 464 IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYG 523
+ V AL+ LH +H+++K+ +ILL + R K+++FG + +
Sbjct: 132 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---- 184
Query: 524 LQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA-ELLY 582
+ +VGT +MAPE I P++D+++ G++V+E++ G + +A +++
Sbjct: 185 ----KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 240
Query: 583 ASI-SRVLEESNVREKLRGFID 603
++ R+ V L+GF+D
Sbjct: 241 DNLPPRLKNLHKVSPSLKGFLD 262
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 108
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 109 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 166 RTT----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 216 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 254
Query: 637 SEVF 640
EV
Sbjct: 255 REVL 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 85 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 144
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 201
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 202 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK-------WMP 254
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 105
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 106 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 163 RAA----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 213 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 251
Query: 637 SEVF 640
EV
Sbjct: 252 REVL 255
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 109
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 110 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTX- 165
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 166 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 214
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 215 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 255
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKG------DVSSEINILKKINHSNIIR 418
+I +G F G V+ G + D A+K ++ D E ++ K++H +++
Sbjct: 17 EIGSGQF-------GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY 478
L G C+ + LV+EF ++G LSD+L + R + + + DV + YL +
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 479 TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT---YG 535
+H++L N L+ N K+++FG+ R D++ GT
Sbjct: 126 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----------TGTKFPVK 172
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ +PE + K DV++FGV++ E+ S
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 62 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 121
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 122 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 178
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 179 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK-------WMP 231
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 71 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 130
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 131 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 187
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 188 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMP 240
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 50 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 104
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 105 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 161
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 162 RTT----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 211
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 212 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 250
Query: 637 SEVF 640
EV
Sbjct: 251 REVL 254
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSL 118
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 175
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+AR + + +GG + + +M
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMP 228
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 113
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 114 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 169
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 170 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 218
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 219 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 259
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 18 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 71 YVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHK----DNIGSQYLLNWC 125
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FG A+ ++E E G +
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 183 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 229
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 230 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 276
Query: 645 KI 646
K+
Sbjct: 277 KM 278
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 99/202 (49%), Gaps = 19/202 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQ 463
E+ I++ H N++ + + ++V EF + GAL+D + T + +Q
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV------THTRMNEEQIAA 129
Query: 464 IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYG 523
+ V AL+ LH +H+++K+ +ILL + R K+++FG + +
Sbjct: 130 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---- 182
Query: 524 LQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA-ELLY 582
+ +VGT +MAPE I P++D+++ G++V+E++ G + +A +++
Sbjct: 183 ----KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 238
Query: 583 ASI-SRVLEESNVREKLRGFID 603
++ R+ V L+GF+D
Sbjct: 239 DNLPPRLKNLHKVSPSLKGFLD 260
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 68 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 122
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 123 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 179
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 180 RTT----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 229
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 230 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 268
Query: 637 SEVF 640
EV
Sbjct: 269 REVL 272
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 128/304 (42%), Gaps = 65/304 (21%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKV---MKGDVSSEINILKK------------ 410
+I G F G V++G D + V + + GD E +++K
Sbjct: 26 QIGKGGF-------GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 411 -INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVA 469
+NH NI++L G +V EF G L L + + W ++++ D+A
Sbjct: 79 NLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIA 132
Query: 470 NALNYLHKYTNPPYVHKNLKTSNIL---LDTN--LRAKITNFGLARSAESDEHEQGGYGL 524
+ Y+ NPP VH++L++ NI LD N + AK+ +F L++ + H G
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS---VHSVSG--- 185
Query: 525 QLTRHVVGTYGYMAPEYI--ENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582
++G + +MAPE I E T K D ++F +++ +L+G E Y
Sbjct: 186 -----LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-------EYSY 233
Query: 583 ASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVT 642
I + + +RE+ LR P D + + + C + D RP S +
Sbjct: 234 GKIKFI---NMIREE-------GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 643 LSKI 646
LS++
Sbjct: 284 LSEL 287
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 48 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 102
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 103 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 159
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE + K+D+++ GV+ E L G+ +
Sbjct: 160 RTT----------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 209
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 210 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPML 248
Query: 637 SEVF 640
EV
Sbjct: 249 REVL 252
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 36/212 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-KGDVSS--------EINILKKINHSNII 417
I G+F+ + + R G + AV+++ K ++S E+ I+K +NH NI+
Sbjct: 22 IGKGNFA-----KVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWL--HSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
+L E YLV E+A G + D+L H + ++Q + +A+ Y
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IVSAVQYC 129
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
H+ VH++LK N+LLD ++ KI +FG + + +G +L G+
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLDT-FCGSPP 177
Query: 536 YMAPEYIENGVIT-PKLDVFAFGVVVLELLSG 566
Y APE + P++DV++ GV++ L+SG
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 42/277 (15%)
Query: 344 LSHPQGFRSAVESLT------LYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVM 397
+SH Q FR+A++ + Y +KI GS G V + + V V
Sbjct: 4 MSHEQ-FRAALQLVVDPGDPRSYLDNFIKIGEGS-------TGIVCIATVRSSGKLVAVK 55
Query: 398 KGDVSS---------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
K D+ E+ I++ H N++ + + ++V EF + GAL+D +
Sbjct: 56 KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--- 112
Query: 449 RYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGL 508
T + +Q + V AL+ LH +H+++K+ +ILL + R K+++FG
Sbjct: 113 ---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGF 166
Query: 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRE 568
+ + + +VGT +MAPE I P++D+++ G++V+E++ G
Sbjct: 167 CAQVSKEVPRR--------KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 218
Query: 569 AVTGDQNCEA-ELLYASI-SRVLEESNVREKLRGFID 603
+ +A +++ ++ R+ V L+GF+D
Sbjct: 219 PYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 112
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 168
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 169 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 217
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 218 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 258
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 39/244 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ I + H NI+RL G+ YL+ E+A G + L Q
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKF 110
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ ++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 111 DEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
+ GT Y+ PE IE K+D+++ GV+ E L G+ +
Sbjct: 168 RTT----------LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
Query: 577 EAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSI 636
E Y ISRV F P E DL +++L K H+ + RP +
Sbjct: 218 ET---YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPXL 256
Query: 637 SEVF 640
EV
Sbjct: 257 REVL 260
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 28/189 (14%)
Query: 389 GDDAAVKVMK----------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADN 438
G AVK++ G + EI LK H +II+L + ++V E+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498
G L D++ ++ + + ++ Q + +A++Y H++ VH++LK N+LLD +
Sbjct: 96 GELFDYI--CKHGRVEEMEARRLFQ---QILSAVDYCHRHM---VVHRDLKPENVLLDAH 147
Query: 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT-PKLDVFAFG 557
+ AKI +FGL+ E R G+ Y APE I + P++D+++ G
Sbjct: 148 MNAKIADFGLSNMMSDGE---------FLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCG 198
Query: 558 VVVLELLSG 566
V++ LL G
Sbjct: 199 VILYALLCG 207
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 16 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 69 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 123
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FG A+ ++E E G +
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 181 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 227
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 228 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274
Query: 645 KI 646
K+
Sbjct: 275 KM 276
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
+E+ I++ H N++ + + ++V EF + GAL+D + R + +Q
Sbjct: 66 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIA 119
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ V AL+ LH +H+++K+ +ILL + R K+++FG + +
Sbjct: 120 AVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--- 173
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA-ELL 581
+ +VGT +MAPE I P++D+++ G++V+E++ G + +A +++
Sbjct: 174 -----KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 228
Query: 582 YASI-SRVLEESNVREKLRGFID 603
++ R+ V L+GF+D
Sbjct: 229 RDNLPPRLKNLHKVSPSLKGFLD 251
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 44/222 (19%)
Query: 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGDVSS--------EINILKKINHSN 415
++ TG F G V R + G+ A+K + ++S EI I+KK+NH N
Sbjct: 21 RLGTGGF-------GYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 73
Query: 416 IIRLSGFCVHEGNT--------YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
++ S V +G L E+ + G L +L N+++ L + D
Sbjct: 74 VV--SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLKEGPIRTLLSD 129
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLD---TNLRAKITNFGLARSAESDEHEQGGYGL 524
+++AL YLH+ +H++LK NI+L L KI + G A+ E +QG
Sbjct: 130 ISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-----ELDQG---- 177
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+L VGT Y+APE +E T +D ++FG + E ++G
Sbjct: 178 ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 44/222 (19%)
Query: 366 KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGDVSS--------EINILKKINHSN 415
++ TG F G V R + G+ A+K + ++S EI I+KK+NH N
Sbjct: 22 RLGTGGF-------GYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 74
Query: 416 IIRLSGFCVHEGNT--------YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
++ S V +G L E+ + G L +L N+++ L + D
Sbjct: 75 VV--SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLKEGPIRTLLSD 130
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLD---TNLRAKITNFGLARSAESDEHEQGGYGL 524
+++AL YLH+ +H++LK NI+L L KI + G A+ E +QG
Sbjct: 131 ISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-----ELDQG---- 178
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+L VGT Y+APE +E T +D ++FG + E ++G
Sbjct: 179 ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 26/215 (12%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHS 414
E+L F +K+AT +++ + R K D ++V + EI+ LK + H
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVER-----EISYLKLLRHP 69
Query: 415 NIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNY 474
+II+L + +V E+A G L D++ + T D + + + A+ Y
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTED-----EGRRFFQQIICAIEY 123
Query: 475 LHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H++ VH++LK N+LLD NL KI +FGL S+ G + + G+
Sbjct: 124 CHRHK---IVHRDLKPENLLLDDNLNVKIADFGL-----SNIMTDGNF----LKTSCGSP 171
Query: 535 GYMAPEYIENGVI--TPKLDVFAFGVVVLELLSGR 567
Y APE I NG + P++DV++ G+V+ +L GR
Sbjct: 172 NYAAPEVI-NGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 28/189 (14%)
Query: 389 GDDAAVKVMK----------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADN 438
G AVK++ G + EI LK H +II+L + ++V E+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498
G L D++ ++ + + ++ Q + +A++Y H++ VH++LK N+LLD +
Sbjct: 96 GELFDYI--CKHGRVEEMEARRLFQ---QILSAVDYCHRHM---VVHRDLKPENVLLDAH 147
Query: 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT-PKLDVFAFG 557
+ AKI +FGL+ E R G+ Y APE I + P++D+++ G
Sbjct: 148 MNAKIADFGLSNMMSDGE---------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCG 198
Query: 558 VVVLELLSG 566
V++ LL G
Sbjct: 199 VILYALLCG 207
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 50/301 (16%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKGDVSSEIN-------- 406
Y+ Q +I G E + G V++G + + A+K K S +
Sbjct: 5 YEIQRERIELGRCIGEGQF-GDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
+++ +H +I++L G + E +++ E G L +L ++ +L + AY
Sbjct: 64 TMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKF----SLDLASLILYAY 118
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
++ AL YL + +VH+++ N+L+ +N K+ +FGL+R E + G
Sbjct: 119 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP 175
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE-LLSGREAVTGDQNCEAELLYASI 585
+ +MAPE I T DV+ FGV + E L+ G + G +N
Sbjct: 176 IK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---------- 218
Query: 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645
+ G I+ R P + ++ L C A+D + RP +E+ LS
Sbjct: 219 ----------NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 268
Query: 646 I 646
I
Sbjct: 269 I 269
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKGDVSS----------EINILKK 410
K+ GSF G V RG + K AVK +K DV S E+N +
Sbjct: 25 KLGDGSF-------GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
++H N+IRL G V +V E A G+L D L ++ + + A VA
Sbjct: 78 LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAE 132
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRH 529
+ YL ++H++L N+LL T KI +FGL R+ ++D+H Y +Q R
Sbjct: 133 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH----YVMQEHRK 185
Query: 530 VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572
V + + APE ++ + D + FGV + E+ + G+E G
Sbjct: 186 V--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKGDVSS----------EINILKK 410
K+ GSF G V RG + K AVK +K DV S E+N +
Sbjct: 19 KLGDGSF-------GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
++H N+IRL G V +V E A G+L D L ++ + + A VA
Sbjct: 72 LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAE 126
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRH 529
+ YL ++H++L N+LL T KI +FGL R+ ++D+H Y +Q R
Sbjct: 127 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH----YVMQEHRK 179
Query: 530 VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572
V + + APE ++ + D + FGV + E+ + G+E G
Sbjct: 180 V--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 221
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 57/302 (18%)
Query: 361 KFQDLKI-ATGSFSEENRIQGSVYRGSFKGDDAAVKV--------------MKGDVSSEI 405
+F+ +K+ +G+F G+VY+G + + VK+ ++ E
Sbjct: 23 EFKKIKVLGSGAF-------GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++ +++ ++ RL G C+ L+ + G L D++ ++ DN+ + +
Sbjct: 76 YVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWC 130
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A +NYL + VH++L N+L+ T KIT+FG A+ ++E E G +
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYAS 584
+ +MA E I + + T + DV+++GV V EL++ G + G E
Sbjct: 188 V------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 234
Query: 585 ISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLS 644
IS +LE+ R P + + C D ++RP E+ + S
Sbjct: 235 ISSILEKGE-------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 281
Query: 645 KI 646
K+
Sbjct: 282 KM 283
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 380 GSVYRGSFKGDDA--AVK--------VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNT 429
G V+ K DD A+K + + V E+ L K+ H I+R + + T
Sbjct: 19 GVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78
Query: 430 ------------YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK 477
Y+ + L DW+ N T + + I +A A+ +LH
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENLKDWM--NGRCTIEERERSVCLHIFLQIAEAVEFLH- 135
Query: 478 YTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ--LTRHV--VGT 533
+ +H++LK SNI + K+ +FGL + + DE EQ RH VGT
Sbjct: 136 --SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGT 193
Query: 534 YGYMAPEYIENGVITPKLDVFAFGVVVLELL 564
YM+PE I + K+D+F+ G+++ ELL
Sbjct: 194 KLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKGDVSS----------EINILKK 410
K+ GSF G V RG + K AVK +K DV S E+N +
Sbjct: 15 KLGDGSF-------GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
++H N+IRL G V +V E A G+L D L ++ + + A VA
Sbjct: 68 LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAE 122
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRH 529
+ YL ++H++L N+LL T KI +FGL R+ ++D+H Y +Q R
Sbjct: 123 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH----YVMQEHRK 175
Query: 530 VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572
V + + APE ++ + D + FGV + E+ + G+E G
Sbjct: 176 V--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 217
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKGDVSS----------EINILKK 410
K+ GSF G V RG + K AVK +K DV S E+N +
Sbjct: 15 KLGDGSF-------GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
++H N+IRL G V +V E A G+L D L ++ + + A VA
Sbjct: 68 LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAE 122
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRH 529
+ YL + ++H++L N+LL T KI +FGL R+ ++D+H Y +Q R
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH----YVMQEHRK 175
Query: 530 VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572
V + + APE ++ + D + FGV + E+ + G+E G
Sbjct: 176 V--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 217
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQR 110
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 111 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTT- 166
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + E
Sbjct: 167 ---------LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 215
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 216 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 256
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+ I + H NI+RL G+ YL+ E+A G + L Q ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-----QKLSKFDEQR 109
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
++ANAL+Y H + +H+++K N+LL + KI +FG + A S
Sbjct: 110 TATYITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA- 165
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
+ GT Y+ PE IE + K+D+++ GV+ E L G+ + +
Sbjct: 166 ---------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT-- 214
Query: 581 LYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
Y ISRV F P E DL +++L K H+ + RP + EV
Sbjct: 215 -YKRISRV-----------EFTFPDFVTEGARDL---ISRLLK----HNPSQRPMLREVL 255
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKGDVSS----------EINILKK 410
K+ GSF G V RG + K AVK +K DV S E+N +
Sbjct: 19 KLGDGSF-------GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
++H N+IRL G V +V E A G+L D L ++ + + A VA
Sbjct: 72 LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAE 126
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRH 529
+ YL + ++H++L N+LL T KI +FGL R+ ++D+H Y +Q R
Sbjct: 127 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH----YVMQEHRK 179
Query: 530 VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572
V + + APE ++ + D + FGV + E+ + G+E G
Sbjct: 180 V--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 221
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGF 422
+ +G+FSE + R+ G ++ + K + + +EI +LKKI H NI+ L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLF--ALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 423 CVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPP 482
+ YLV + G L D R T K + V +A+ YLH+
Sbjct: 75 YESTTHYYLVMQLVSGGELFD-----RILERGVYTEKDASLVIQQVLSAVKYLHE---NG 126
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAP 539
VH++LK N+L + N + IT+FGL++ EQ G + GT GY+AP
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM------EQNG----IMSTACGTPGYVAP 176
Query: 540 EYIENGVITPKLDVFAFGVVVLELLSG 566
E + + +D ++ GV+ LL G
Sbjct: 177 EVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 38/229 (16%)
Query: 351 RSAVESLTLYKFQDLKIATGSFSE----ENRIQGSVY------RGSFKGDDAAVKVMKGD 400
+ A + +++F++ + TG+FSE E + G ++ + + KG +++++
Sbjct: 15 KQAEDIKKIFEFKET-LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE----- 68
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+EI +L+KI H NI+ L + YLV + G L D + + T + +
Sbjct: 69 --NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS--- 123
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL---DTNLRAKITNFGLARSAESDEH 517
+ V +A+ YLH+ VH++LK N+L D + I++FGL++
Sbjct: 124 --TLIRQVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSK------- 171
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
G G + GT GY+APE + + +D ++ GV+ LL G
Sbjct: 172 -MEGKG-DVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 19/169 (11%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E I + + H NI+RL EG YLV++ G L + + + Y + + +
Sbjct: 77 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS--- 133
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA---KITNFGLARSAESDEH 517
+ + ++N++H++ VH++LK N+LL + + K+ +FGLA + ++
Sbjct: 134 --HCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ 188
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
G+ GT GY++PE + +D++A GV++ LL G
Sbjct: 189 AWFGFA--------GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 23/244 (9%)
Query: 398 KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
K +V +EI+++ +++H+N+I+L + + LV E+ D G L D + Y NLT
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY----NLT 185
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA---KITNFGLARSAES 514
+ + + ++H+ +H +LK NIL N A KI +FGLAR +
Sbjct: 186 ELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILC-VNRDAKQIKIIDFGLARRYKP 241
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
E + + GT ++APE + ++ D+++ GV+ LLSG GD
Sbjct: 242 REKLKVNF---------GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292
Query: 575 NCEA--ELLYASISRVLEE-SNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLN 631
+ E +L EE ++ E+ + FI L E ++ S A + H L+
Sbjct: 293 DAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLH 352
Query: 632 ARPS 635
+R S
Sbjct: 353 SRLS 356
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + ++ E++IL+++ H N+I L + + L+ E G L D+L ++
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-----ES 111
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
L+ ++ + + +NYLH H +LK NI LLD N+ K+ +FGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
E G++ +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 169 IED--------GVEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Query: 572 GDQNCEAELLYASISRVLEE---SNVREKLRGFIDPSLRNE 609
GD E S+S +E S+ E + FI L E
Sbjct: 220 GDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKE 260
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 380 GSVYRGSFKGD-------DAAVKVM--------KGDVSSEINILKKINHSNIIRLSGFCV 424
G VY G G AVK + + D E I+ K NH NI+R G +
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 104
Query: 425 HEGNTYLVYEFADNGALSDWLHSNRYQTSD--NLTWKQRVQIAYDVANALNYLHKYTNPP 482
+++ E G L +L R + S +L + +A D+A YL +
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 161
Query: 483 YVHKNLKTSNILL---DTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMA 538
++H+++ N LL AKI +FG+A+ + + +GG + + +M
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK-------WMP 214
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS 565
PE G+ T K D ++FGV++ E+ S
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 71 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 182
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 183 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + ++ E++IL+++ H N+I L + + L+ E G L D+L ++
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKES 111
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
L+ ++ + + +NYLH H +LK NI LLD N+ K+ +FGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
E G++ +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 169 IED--------GVEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Query: 572 GDQNCEAELLYASISRVLEE---SNVREKLRGFIDPSLRNE 609
GD E S+S +E S+ E + FI L E
Sbjct: 220 GDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKE 260
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 71 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPD-HDHTG 182
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 183 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN-RYQTSDNLTWK 459
+ EI I + H NI+R+ + YL+ EFA G L L + R+ + T+
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
+ ++A+AL+Y H+ +H+++K N+L+ KI +FG + A S
Sbjct: 121 E------ELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR--- 168
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
R + GT Y+ PE IE K+D++ GV+ E L G
Sbjct: 169 -------RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 73 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 184
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 185 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 69 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 124
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 125 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 180
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 181 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKG------DVSSEINILKKINHSNIIR 418
+I +G F G V+ G + D A+K ++ D E ++ K++H +++
Sbjct: 15 EIGSGQF-------GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKY 478
L G C+ + LV EF ++G LSD+L + R + + + DV + YL +
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 479 TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT---YG 535
+H++L N L+ N K+++FG+ R D++ GT
Sbjct: 124 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----------TGTKFPVK 170
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ +PE + K DV++FGV++ E+ S
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN-RYQTSDNLTWK 459
+ EI I + H NI+R+ + YL+ EFA G L L + R+ + T+
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
+ ++A+AL+Y H+ +H+++K N+L+ KI +FG + A S
Sbjct: 121 E------ELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR--- 168
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
R + GT Y+ PE IE K+D++ GV+ E L G
Sbjct: 169 -------RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + ++ E++IL+++ H NII L + + L+ E G L D+L ++
Sbjct: 57 VCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK-----ES 111
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
L+ ++ + + +NYLH H +LK NI LLD N+ K+ +FGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
E G++ +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 169 IED--------GVEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Query: 572 GDQNCE 577
GD E
Sbjct: 220 GDTKQE 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 69 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 124
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 125 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 180
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 181 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN-RYQTSDNLTWK 459
+ EI I + H NI+R+ + YL+ EFA G L L + R+ + T+
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 121
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
+ ++A+AL+Y H+ +H+++K N+L+ KI +FG + A S
Sbjct: 122 E------ELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR--- 169
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
R + GT Y+ PE IE K+D++ GV+ E L G
Sbjct: 170 -------RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 75 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPD-HDHTG 186
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 187 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + ++ E++IL+++ H N+I L + + L+ E G L D+L ++
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKES 111
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
L+ ++ + + +NYLH H +LK NI LLD N+ K+ +FGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
E G++ +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 169 IED--------GVEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Query: 572 GDQNCEAELLYASISRVLEE---SNVREKLRGFIDPSLRNE 609
GD E S+S +E S+ E + FI L E
Sbjct: 220 GDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKE 260
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 75 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 186
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 187 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 76 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 131
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 132 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 187
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 188 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 77 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 132
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 133 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 188
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 189 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 236
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 68 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 123
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 124 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 179
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 180 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 227
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 75 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 186
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 187 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 71 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPD-HDHTG 182
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 183 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 91 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 146
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 147 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 202
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 203 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 79 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 134
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 135 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 190
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 191 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 238
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 71 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 182
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 183 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 38/226 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK----------GDVSSEINILKKINHSN 415
K+ +G++ E + + G + A+K++K G + E+ +LK+++H N
Sbjct: 28 KLGSGAYGEV-----LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSD-WLHSNRYQTSDNLTWKQRVQIAYDVANALNY 474
I++L F + N YLV E G L D + ++ D I V + Y
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV------IMKQVLSGTTY 136
Query: 475 LHKYTNPPYVHKNLKTSNILLDTNLR---AKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
LHK+ VH++LK N+LL++ R KI +FGL S E GG + +
Sbjct: 137 LHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGL-----SAHFEVGGK----MKERL 184
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
GT Y+APE + K DV++ GV++ LL G G + E
Sbjct: 185 GTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPFGGQTDQE 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 71 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPD-HDHTG 182
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 183 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 367 IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGF 422
I TGS+ +I+ G + + + K + SE+N+L+++ H NI+R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 423 CVHEGNT--YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
+ NT Y+V E+ + G L+ + + + L + +++ + AL H+ ++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 481 PPY--VHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMA 538
+ +H++LK +N+ LD K+ +FGLAR DE + VGT YM+
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--------DFAKEFVGTPYYMS 184
Query: 539 PEYIENGVITPKLDVFAFGVVVLEL 563
PE + K D+++ G ++ EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 75 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPD-HDHTG 186
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 187 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 407 ILKKINHSNIIRLSGFCVH-EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
+++ +NH N++ L G + EG +++ + +G L ++ S N T K +
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS----PQRNPTVKDLISFG 130
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
VA + YL +VH++L N +LD + K+ +FGLAR E+ Y +Q
Sbjct: 131 LQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY----YSVQ 183
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
RH + A E ++ T K DV++FGV++ ELL+
Sbjct: 184 QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 127/301 (42%), Gaps = 50/301 (16%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKGDVSSEIN-------- 406
Y+ Q +I G E + G V++G + + A+K K S +
Sbjct: 385 YEIQRERIELGRCIGEGQF-GDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
+++ +H +I++L G + E +++ E G L +L ++ +L + AY
Sbjct: 444 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKF----SLDLASLILYAY 498
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
++ AL YL + +VH+++ N+L+ +N K+ +FGL+R E + + G
Sbjct: 499 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE-LLSGREAVTGDQNCEAELLYASI 585
+ +MAPE I T DV+ FGV + E L+ G + G +N +
Sbjct: 556 IK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------- 600
Query: 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645
+ G I+ R P + ++ L C A+D + RP +E+ LS
Sbjct: 601 ------------VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 648
Query: 646 I 646
I
Sbjct: 649 I 649
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + ++ E++IL+++ H N+I L + + L+ E G L D+L ++
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-----ES 111
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
L+ ++ + + +NYLH H +LK NI LLD N+ K+ +FGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
E G++ +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 169 IED--------GVEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Query: 572 GDQNCE 577
GD E
Sbjct: 220 GDTKQE 225
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 36/212 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-KGDVSS--------EINILKKINHSNII 417
I G+F+ + + R G + AVK++ K ++S E+ I K +NH NI+
Sbjct: 22 IGKGNFA-----KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIV 76
Query: 418 RLSGFCVHEGNTYLVYEFADNGALSDWL--HSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
+L E YLV E+A G + D+L H + ++Q + +A+ Y
Sbjct: 77 KLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ-------IVSAVQYC 129
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
H+ VH++LK N+LLD + KI +FG + + +G +L G
Sbjct: 130 HQKF---IVHRDLKAENLLLDADXNIKIADFGFS--------NEFTFGNKLD-AFCGAPP 177
Query: 536 YMAPEYIENGVIT-PKLDVFAFGVVVLELLSG 566
Y APE + P++DV++ GV++ L+SG
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 50/301 (16%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKGDVSSEIN-------- 406
Y+ Q +I G E + G V++G + + A+K K S +
Sbjct: 5 YEIQRERIELGRCIGEGQF-GDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
+++ +H +I++L G + E +++ E G L +L ++ +L + AY
Sbjct: 64 TMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKF----SLDLASLILYAY 118
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
++ AL YL + +VH+++ N+L+ K+ +FGL+R E + + G
Sbjct: 119 QLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE-LLSGREAVTGDQNCEAELLYASI 585
+ +MAPE I T DV+ FGV + E L+ G + G +N
Sbjct: 176 IK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---------- 218
Query: 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645
+ G I+ R P + ++ L C A+D + RP +E+ LS
Sbjct: 219 ----------NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 268
Query: 646 I 646
I
Sbjct: 269 I 269
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ +L+
Sbjct: 75 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI 130
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 186
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 187 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 49/281 (17%)
Query: 380 GSVYRGSF---KGD--DAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHE 426
G VY G + KG+ + AVK K D + SE I+K ++H +I++L G + E
Sbjct: 38 GEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEE 96
Query: 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHK 486
T+++ E G L +L N+ ++L V + + A+ YL VH+
Sbjct: 97 EPTWIIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESINC---VHR 149
Query: 487 NLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV 546
++ NIL+ + K+ +FGL+R E +++ Y +TR + +M+PE I
Sbjct: 150 DIAVRNILVASPECVKLGDFGLSRYIEDEDY----YKASVTRLPI---KWMSPESINFRR 202
Query: 547 ITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPS 605
T DV+ F V + E+LS G++ +N + VLE+ +
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQPFFWLEN-------KDVIGVLEKGD------------ 243
Query: 606 LRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
R P + L C +D + RP +E+ +LS +
Sbjct: 244 -RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 396 VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V + ++ E++IL+++ H N+I L + + L+ E G L D+L ++
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-----ES 111
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI-LLDTNL---RAKITNFGLARS 511
L+ ++ + + +NYLH H +LK NI LLD N+ K+ +FGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 512 AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVT 571
E G++ +++ GT ++APE + + + D+++ GV+ LLSG
Sbjct: 169 IED--------GVEF-KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Query: 572 GDQNCE 577
GD E
Sbjct: 220 GDTKQE 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 75 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 186
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 187 FLXE----XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 76 EIKILLRFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 131
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 132 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 187
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 188 FLXE----XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 5 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 108
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L++ H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 109 LFQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 157
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 42/220 (19%)
Query: 370 GSFSEENRIQGSVYRGSF----------KGDDAAVKVMKG------DVSS---EINILKK 410
G+F+E I + +GSF + AVKV+ D S+ E+ +LKK
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSD-WLHSNRYQTSDNLTWKQRVQIAYDVA 469
++H NI++L + Y+V E G L D + R+ D +I V
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA------ARIIKQVF 131
Query: 470 NALNYLHKYTNPPYVHKNLKTSNILLDTNLR---AKITNFGLARSAESDEHEQGGYGLQL 526
+ + Y+HK+ VH++LK NILL++ + KI +FGL+ + +
Sbjct: 132 SGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--------- 179
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+ +GT Y+APE + G K DV++ GV++ LLSG
Sbjct: 180 MKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG 218
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQT---- 452
M+ D E ++ + ++ NI++L G C L++E+ G L+++L S T
Sbjct: 93 MQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSL 152
Query: 453 -SDNLTWKQRVQ--------------IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT 497
+L+ + RV IA VA + YL + +VH++L T N L+
Sbjct: 153 SHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGE 209
Query: 498 NLRAKITNFGLARSAES-DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAF 556
N+ KI +FGL+R+ S D ++ G R +M PE I T + DV+A+
Sbjct: 210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIR-------WMPPESIFYNRYTTESDVWAY 262
Query: 557 GVVVLELLS 565
GVV+ E+ S
Sbjct: 263 GVVLWEIFS 271
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 49/281 (17%)
Query: 380 GSVYRGSF---KGD--DAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHE 426
G VY G + KG+ + AVK K D + SE I+K ++H +I++L G + E
Sbjct: 22 GEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEE 80
Query: 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHK 486
T+++ E G L +L N+ ++L V + + A+ YL VH+
Sbjct: 81 EPTWIIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESINC---VHR 133
Query: 487 NLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV 546
++ NIL+ + K+ +FGL+R E +++ Y +TR + +M+PE I
Sbjct: 134 DIAVRNILVASPECVKLGDFGLSRYIEDEDY----YKASVTRLPI---KWMSPESINFRR 186
Query: 547 ITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPS 605
T DV+ F V + E+LS G++ +N + VLE+ + K P
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQPFFWLEN-------KDVIGVLEKGDRLPK------PD 233
Query: 606 LRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
L + L C +D + RP +E+ +LS +
Sbjct: 234 L-------CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 39/294 (13%)
Query: 366 KIATGS----FSEENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSG 421
KI GS F NR G + + V+K EI +LK++ H N++ L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQRVQIAYDVANALNYLHKYT 479
+ +LV+E+ D+ L + +RYQ ++L I + A+N+ HK+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLV----KSITWQTLQAVNFCHKHN 122
Query: 480 NPPYVHKNLKTSNILLDTNLRAKITNFGLAR--SAESDEHEQGGYGLQLTRHVVGTYGYM 537
+H+++K NIL+ + K+ +FG AR + SD ++ V T Y
Sbjct: 123 C---IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE----------VATRWYR 169
Query: 538 APE-YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYAS-----ISRVLEE 591
+PE + + P +DV+A G V ELLSG G + + L I R +
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV 229
Query: 592 SNVREKLRGFIDPSLRNEYPLDLAF-----SMAQLAKNCTAHDLNARPSISEVF 640
+ + G P + PL+L F L K C D R + ++
Sbjct: 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 42/220 (19%)
Query: 370 GSFSEENRIQGSVYRGSF----------KGDDAAVKVMKG------DVSS---EINILKK 410
G+F+E I + +GSF + AVKV+ D S+ E+ +LKK
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSD-WLHSNRYQTSDNLTWKQRVQIAYDVA 469
++H NI++L + Y+V E G L D + R+ D +I V
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA------ARIIKQVF 131
Query: 470 NALNYLHKYTNPPYVHKNLKTSNILLDTNLR---AKITNFGLARSAESDEHEQGGYGLQL 526
+ + Y+HK+ VH++LK NILL++ + KI +FGL+ + +
Sbjct: 132 SGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--------- 179
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+ +GT Y+APE + G K DV++ GV++ LLSG
Sbjct: 180 MKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG 218
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E I + + HSNI+RL EG YLV++ G L + + + Y + + +
Sbjct: 50 LEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS--- 106
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA---KITNFGLARSAESDEH 517
+ A+ + H+ VH++LK N+LL + + K+ +FGLA + D+
Sbjct: 107 --HCIQQILEAVLHCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ 161
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
G+ GT GY++PE + +D++A GV++ LL G
Sbjct: 162 AWFGFA--------GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 23/168 (13%)
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSD-WLHSNRYQTSDNLTWKQR 461
E+ +LK ++H NI++L F + N YLV E G L D +H ++ D
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---- 140
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLR---AKITNFGLARSAESDEHE 518
I V + + YLHK+ VH++LK N+LL++ + KI +FGL+ E+ +
Sbjct: 141 --IIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK- 194
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+ +GT Y+APE + K DV++ GV++ LL+G
Sbjct: 195 --------MKERLGTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAG 233
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 384 RGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSD 443
+G + D+ ++ ++ +EI++LK ++H NII+L + YLV EF + G L +
Sbjct: 76 KGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE 135
Query: 444 WLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN---LR 500
+ NR++ + I + + + YLHK+ VH+++K NILL+ L
Sbjct: 136 QI-INRHKFDEC----DAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLN 187
Query: 501 AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVV 560
KI +FGL+ D Y L R +GT Y+APE ++ K DV++ GV++
Sbjct: 188 IKIVDFGLSSFFSKD------YKL---RDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIM 237
Query: 561 LELLSG 566
LL G
Sbjct: 238 YILLCG 243
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 73 EIKILLAFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD-HDHTG 184
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 185 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 386 SFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL 445
+ K A + + D E +L + H +I+R G C +V+E+ +G L+ +L
Sbjct: 52 AVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 111
Query: 446 HSNRYQTS----------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL 495
S+ L Q + +A VA + YL +VH++L T N L+
Sbjct: 112 RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLV 168
Query: 496 DTNLRAKITNFGLARSAES-DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554
L KI +FG++R S D + GG + R +M PE I T + DV+
Sbjct: 169 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-------WMPPESILYRKFTTESDVW 221
Query: 555 AFGVVVLELLS-GREAVTGDQNCEA 578
+FGVV+ E+ + G++ N EA
Sbjct: 222 SFGVVLWEIFTYGKQPWYQLSNTEA 246
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 7 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 110
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--------GVPV 159
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 38/224 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKGDVSS----------EINILKK 410
K+ GSF G V RG + K AVK +K DV S E+N +
Sbjct: 15 KLGDGSF-------GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
++H N+IRL G V +V E A G+L D L ++ + + A VA
Sbjct: 68 LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAE 122
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRH 529
+ YL ++H++L N+LL T KI +FGL R+ ++D+H + H
Sbjct: 123 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX------VMQEH 173
Query: 530 VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572
+ + APE ++ + D + FGV + E+ + G+E G
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 217
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 21/191 (10%)
Query: 386 SFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL 445
+ K A + + D E +L + H +I+R G C +V+E+ +G L+ +L
Sbjct: 46 AVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 105
Query: 446 HSNRYQTS----------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL 495
S+ L Q + +A VA + YL +VH++L T N L+
Sbjct: 106 RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLV 162
Query: 496 DTNLRAKITNFGLARSAES-DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554
L KI +FG++R S D + GG + R +M PE I T + DV+
Sbjct: 163 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-------WMPPESILYRKFTTESDVW 215
Query: 555 AFGVVVLELLS 565
+FGVV+ E+ +
Sbjct: 216 SFGVVLWEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 21/191 (10%)
Query: 386 SFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL 445
+ K A + + D E +L + H +I+R G C +V+E+ +G L+ +L
Sbjct: 75 AVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134
Query: 446 HSNRYQTS----------DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL 495
S+ L Q + +A VA + YL +VH++L T N L+
Sbjct: 135 RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLV 191
Query: 496 DTNLRAKITNFGLARSAES-DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554
L KI +FG++R S D + GG + R +M PE I T + DV+
Sbjct: 192 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-------WMPPESILYRKFTTESDVW 244
Query: 555 AFGVVVLELLS 565
+FGVV+ E+ +
Sbjct: 245 SFGVVLWEIFT 255
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 39/214 (18%)
Query: 367 IATGSFSE----ENRIQGSVY------RGSFKGDDAAVKVMKGDVSSEINILKKINHSNI 416
+ GSF E ++RI Y + S K D + + E+ +LKK++H NI
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST------ILREVELLKKLDHPNI 83
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSD-WLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
++L + Y+V E G L D + R+ D +I V + + Y+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA------ARIIKQVFSGITYM 137
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLR---AKITNFGLARSAESDEHEQGGYGLQLTRHVVG 532
HK+ VH++LK NILL++ + KI +FGL+ + + + +G
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---------MKDRIG 185
Query: 533 TYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
T Y+APE + G K DV++ GV++ LLSG
Sbjct: 186 TAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 38/224 (16%)
Query: 366 KIATGSFSEENRIQGSVYRGSF-----KGDDAAVKVMKGDVSS----------EINILKK 410
K+ GSF G V RG + K AVK +K DV S E+N +
Sbjct: 25 KLGDGSF-------GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
++H N+IRL G V +V E A G+L D L ++ + + A VA
Sbjct: 78 LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAE 132
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS-AESDEHEQGGYGLQLTRH 529
+ YL ++H++L N+LL T KI +FGL R+ ++D+H + H
Sbjct: 133 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX------VMQEH 183
Query: 530 VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTG 572
+ + APE ++ + D + FGV + E+ + G+E G
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 5 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVA 469
++NH NI++L E YLV+EF L D++ ++ K + + +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGIPLPLIKSYL---FQLL 113
Query: 470 NALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRH 529
L + H + +H++LK N+L++T K+ +FGLAR+ G ++ H
Sbjct: 114 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--------GVPVRTYXH 162
Query: 530 VVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 7 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 110
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 159
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 49/281 (17%)
Query: 380 GSVYRGSF---KGD--DAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHE 426
G VY G + KG+ + AVK K D + SE I+K ++H +I++L G + E
Sbjct: 26 GEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEE 84
Query: 427 GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHK 486
T+++ E G L +L N+ ++L V + + A+ YL VH+
Sbjct: 85 EPTWIIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESINC---VHR 137
Query: 487 NLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV 546
++ NIL+ + K+ +FGL+R E +++ Y +TR + +M+PE I
Sbjct: 138 DIAVRNILVASPECVKLGDFGLSRYIEDEDY----YKASVTRLPI---KWMSPESINFRR 190
Query: 547 ITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPS 605
T DV+ F V + E+LS G++ +N + VLE+ + K P
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQPFFWLEN-------KDVIGVLEKGDRLPK------PD 237
Query: 606 LRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
L + L C +D + RP +E+ +LS +
Sbjct: 238 L-------CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 4 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 107
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 108 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 156
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 157 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 5 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 108
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 157
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 8 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 111
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 160
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 7 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 110
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 159
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 4 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 107
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 108 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 156
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 157 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 12 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 115
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 116 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 164
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 165 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 218
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 6 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 109
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--------GVPV 158
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 9 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 112
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 113 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 161
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 162 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 215
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 5 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 108
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 157
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 31/210 (14%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSS-------EINILKKINHSNIIR 418
K+ GS+ GSVY+ K V + + V S EI+I+++ + ++++
Sbjct: 36 KLGEGSY-------GSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVK 88
Query: 419 LSGFCVHEGNTYLVYEFADNGALSDWLH-SNRYQTSDNLTWKQRVQIAYDVANALNYLHK 477
G + ++V E+ G++SD + N+ T D + I L YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA-----TILQSTLKGLEYLHF 143
Query: 478 YTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYM 537
+H+++K NILL+T AK+ +FG+A Q + V+GT +M
Sbjct: 144 MRK---IHRDIKAGNILLNTEGHAKLADFGVAG--------QLTDXMAKRNXVIGTPFWM 192
Query: 538 APEYIENGVITPKLDVFAFGVVVLELLSGR 567
APE I+ D+++ G+ +E+ G+
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 38/215 (17%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK----------GDVSSEINILKKINHSN 415
K+ +G++ E + + G + A+K++K G + E+ +LK+++H N
Sbjct: 11 KLGSGAYGEV-----LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 416 IIRLSGFCVHEGNTYLVYEFADNGALSD-WLHSNRYQTSDNLTWKQRVQIAYDVANALNY 474
I++L F + N YLV E G L D + ++ D I V + Y
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV------IMKQVLSGTTY 119
Query: 475 LHKYTNPPYVHKNLKTSNILLDTNLR---AKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
LHK+ VH++LK N+LL++ R KI +FGL S E GG + +
Sbjct: 120 LHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGL-----SAHFEVGGK----MKERL 167
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
GT Y+APE + K DV++ GV++ LL G
Sbjct: 168 GTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 5 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 108
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 157
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 8 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA---Y 466
++NH NI++L E YLV+EF + ++ + LT I +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLS-------MDLKKFMDASALTGIPLPLIKSYLF 113
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
+ L + H + +H++LK N+L++T K+ +FGLAR+ G ++
Sbjct: 114 QLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--------GVPVRT 162
Query: 527 TRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 8 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVA 469
++NH NI++L E YLV+EF L D++ ++ K + + +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYL---FQLL 116
Query: 470 NALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRH 529
L + H + +H++LK N+L++T K+ +FGLAR+ G ++ H
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPVRTYXH 165
Query: 530 VVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 12 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 115
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 116 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 164
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 165 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 6 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 109
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 158
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 9 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 112
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 113 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 161
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 162 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 215
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 5 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 108
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 157
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 4 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 107
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 108 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 156
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 8 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 111
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 160
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 4 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 107
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 108 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 156
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 7 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVA 469
++NH NI++L E YLV+EF L D++ ++ K + + +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYL---FQLL 115
Query: 470 NALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRH 529
L + H + +H++LK N+L++T K+ +FGLAR+ G ++ H
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPVRTYXH 164
Query: 530 VVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 46/281 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-----KGDVSSEINILKKINHSNIIRLSG 421
+ G F++ I + + F G ++ + +S EI+I + + H +++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNP 481
F ++V E +L + LH R LT + + YLH+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRR----KALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY 541
+H++LK N+ L+ +L KI +FGLA E D + + + GT Y+APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--------KTLCGTPNYIAPEV 188
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
+ + ++DV++ G ++ LL G+ + +C L+E+ +R K
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSC------------LKETYLRIK---- 230
Query: 602 IDPSLRNEY--PLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
+NEY P + A L + D ARP+I+E+
Sbjct: 231 -----KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 5 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 108
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 157
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 158 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 41/235 (17%)
Query: 361 KFQDLKIATGSFSEE---NRIQGSVYRGSFKG---------------DDAAVKVMKGDVS 402
K +++ ++ F EE +R G VY+G G D A ++ +
Sbjct: 19 KLKEISLSAVRFMEELGEDRF-GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL-----HSNRYQTSDNLT 457
E + ++ H N++ L G + +++ + +G L ++L HS+ T D+ T
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 458 WKQR------VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511
K V + +A + YL + VHK+L T N+L+ L KI++ GL R
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 512 A-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+D ++ G L R +MAPE I G + D++++GVV+ E+ S
Sbjct: 195 VYAADYYKLLGNSLLPIR-------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 6 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 109
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 158
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 46/281 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-----KGDVSSEINILKKINHSNIIRLSG 421
+ G F++ I + + F G ++ + +S EI+I + + H +++ G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNP 481
F ++V E +L + LH R LT + + YLH+
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE-LHKRR----KALTEPEARYYLRQIVLGCQYLHRNR-- 141
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY 541
+H++LK N+ L+ +L KI +FGLA E D + + + GT Y+APE
Sbjct: 142 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--------KTLCGTPNYIAPEV 192
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
+ + ++DV++ G ++ LL G+ + +C L+E+ +R K
Sbjct: 193 LSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSC------------LKETYLRIK---- 234
Query: 602 IDPSLRNEY--PLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
+NEY P + A L + D ARP+I+E+
Sbjct: 235 -----KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 6 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA---Y 466
++NH NI++L E YLV+EF + ++ + LT I +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLS-------MDLKKFMDASALTGIPLPLIKSYLF 111
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
+ L + H + +H++LK N+L++T K+ +FGLAR+ G ++
Sbjct: 112 QLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--------GVPVRT 160
Query: 527 TRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 6 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 109
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 158
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 159 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 5 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 108
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 157
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E I + + H NI+RL EG+ YL+++ G L + + + Y + + +
Sbjct: 68 LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS--- 124
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA---KITNFGLARSAESDEH 517
+ A+ + H+ VH++LK N+LL + L+ K+ +FGLA E ++
Sbjct: 125 --HCIQQILEAVLHCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 179
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
G+ GT GY++PE + +D++A GV++ LL G
Sbjct: 180 AWFGFA--------GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 5 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 108
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 157
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL H NII ++ + + D + D + ++ Y+ + +L+
Sbjct: 73 EIKILLAFRHENIIGINDII----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+ G
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPD-HDHTG 184
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 185 F---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 46/281 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-----KGDVSSEINILKKINHSNIIRLSG 421
+ G F++ I + + F G ++ + +S EI+I + + H +++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNP 481
F ++V E +L + LH R LT + + YLH+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRR----KALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY 541
+H++LK N+ L+ +L KI +FGLA E D + + + GT Y+APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--------KTLCGTPNYIAPEV 188
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
+ + ++DV++ G ++ LL G+ + +C L+E+ +R K
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSC------------LKETYLRIK---- 230
Query: 602 IDPSLRNEY--PLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
+NEY P + A L + D ARP+I+E+
Sbjct: 231 -----KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 46/281 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-----KGDVSSEINILKKINHSNIIRLSG 421
+ G F++ I + + F G ++ + +S EI+I + + H +++ G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNP 481
F ++V E +L + LH R LT + + YLH+
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE-LHKRR----KALTEPEARYYLRQIVLGCQYLHRNR-- 161
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY 541
+H++LK N+ L+ +L KI +FGLA E D + + + GT Y+APE
Sbjct: 162 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--------KVLCGTPNYIAPEV 212
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
+ + ++DV++ G ++ LL G+ + +C L+E+ +R K
Sbjct: 213 LSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSC------------LKETYLRIK---- 254
Query: 602 IDPSLRNEY--PLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
+NEY P + A L + D ARP+I+E+
Sbjct: 255 -----KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 41/235 (17%)
Query: 361 KFQDLKIATGSFSEE---NRIQGSVYRGSFKG---------------DDAAVKVMKGDVS 402
K +++ ++ F EE +R G VY+G G D A ++ +
Sbjct: 2 KLKEISLSAVRFMEELGEDRF-GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL-----HSNRYQTSDNLT 457
E + ++ H N++ L G + +++ + +G L ++L HS+ T D+ T
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 458 WKQR------VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511
K V + +A + YL + VHK+L T N+L+ L KI++ GL R
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 512 A-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+D ++ G L R +MAPE I G + D++++GVV+ E+ S
Sbjct: 178 VYAADYYKLLGNSLLPIR-------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR---YQTSDNLTWKQ 460
E+ +L + H NI++ G+ Y+V ++ + G L +++ + +Q L W
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW-- 130
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
VQI AL ++H + +H+++K+ NI L + ++ +FG+AR S
Sbjct: 131 FVQICL----ALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST----- 178
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREA 569
++L R +GT Y++PE EN K D++A G V+ EL + + A
Sbjct: 179 ---VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA 224
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 29/266 (10%)
Query: 389 GDDAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADN 438
G+ AVK +K EI IL+ + H +I++ G C +G + LV E+
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498
G+L D+L + + L + Q++ + YLH Y+H+ L N+LLD +
Sbjct: 98 GSLRDYLPRHCVGLAQLLLFAQQI------CEGMAYLHAQH---YIHRALAARNVLLDND 148
Query: 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGV 558
KI +FGLA++ +G ++ + APE ++ DV++FGV
Sbjct: 149 RLVKIGDFGLAKAV-----PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGV 203
Query: 559 VVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSM 618
+ ELL+ D N + + + +L ++ R P +
Sbjct: 204 TLYELLT-----YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEI 258
Query: 619 AQLAKNCTAHDLNARPSISEVFVTLS 644
L KNC + + RP+ + L
Sbjct: 259 YHLMKNCWETEASFRPTFQNLVPILQ 284
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 29/266 (10%)
Query: 389 GDDAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADN 438
G+ AVK +K EI IL+ + H +I++ G C +G + LV E+
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 439 GALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498
G+L D+L + + L + Q++ + YLH Y+H+ L N+LLD +
Sbjct: 97 GSLRDYLPRHCVGLAQLLLFAQQI------CEGMAYLHAQH---YIHRALAARNVLLDND 147
Query: 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGV 558
KI +FGLA++ +G ++ + APE ++ DV++FGV
Sbjct: 148 RLVKIGDFGLAKAV-----PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGV 202
Query: 559 VVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSM 618
+ ELL+ D N + + + +L ++ R P +
Sbjct: 203 TLYELLT-----YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEI 257
Query: 619 AQLAKNCTAHDLNARPSISEVFVTLS 644
L KNC + + RP+ + L
Sbjct: 258 YHLMKNCWETEASFRPTFQNLVPILQ 283
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 41/236 (17%)
Query: 358 TLYKFQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------I 405
++ FQ + KI G++ G VY R G+ A+K ++ D +E I
Sbjct: 4 SMENFQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 56
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
++LK++NH NI++L E YLV+E D ++ + LT I
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDL-------KKFMDASALTGIPLPLIK 109
Query: 466 ---YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G
Sbjct: 110 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GV 158
Query: 523 GLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
++ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 159 PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 46/281 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-----KGDVSSEINILKKINHSNIIRLSG 421
+ G F++ I + + F G ++ + +S EI+I + + H +++ G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNP 481
F ++V E +L + LH R LT + + YLH+
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE-LHKRR----KALTEPEARYYLRQIVLGCQYLHRNR-- 159
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY 541
+H++LK N+ L+ +L KI +FGLA E D + + + GT Y+APE
Sbjct: 160 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--------KVLCGTPNYIAPEV 210
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
+ + ++DV++ G ++ LL G+ + +C L+E+ +R K
Sbjct: 211 LSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSC------------LKETYLRIK---- 252
Query: 602 IDPSLRNEY--PLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
+NEY P + A L + D ARP+I+E+
Sbjct: 253 -----KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 127/298 (42%), Gaps = 50/298 (16%)
Query: 380 GSVYRGSFKGDDAAVKVMKGD------VSSEINILKKINHSNIIRLSGFCVHEGNT---- 429
G V+RG + G+ AVK+ +EI + H NI+ GF + +
Sbjct: 22 GEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNIL---GFIASDMTSRNSS 78
Query: 430 ---YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH-----KYTNP 481
+L+ + ++G+L D+L + L ++A A L +LH P
Sbjct: 79 TQLWLITHYHEHGSLYDFLQRQTLEPHLAL------RLAVSAACGLAHLHVEIFGTQGKP 132
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRH-VVGTYGYMAPE 540
H++ K+ N+L+ +NL+ I + GLA H QG L + + VGT YMAPE
Sbjct: 133 AIAHRDFKSRNVLVKSNLQCCIADLGLAVM-----HSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 541 YIENGVITPKL------DVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNV 594
++ + T D++AFG+V+ E ++ R V G E V+
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWE-IARRTIVNGI----VEDYRPPFYDVVPNDPS 242
Query: 595 REKLRGFI-----DPSLRNEYPLDLAFS-MAQLAKNCTAHDLNARPSISEVFVTLSKI 646
E ++ + P++ N D S +AQ+ + C + +AR + + TL KI
Sbjct: 243 FEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKI 300
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 404 EINILKKINHSNIIRLSGFC-----VHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTW 458
EI IL + H NII ++ + YLV GA L ++ ++D++ +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM--GADLYKLLKTQHLSNDHICY 148
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
Y + L Y+H +H++LK SN+LL+T KI +FGLAR A+ D H+
Sbjct: 149 -----FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPD-HD 199
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
G+ LT + V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 200 HTGF---LTEY-VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 355 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGD--------VSSEIN 406
E L Y+ + I TG F+ +++ + + G+ A+K+M + + +EI
Sbjct: 7 ELLKYYELHE-TIGTGGFA---KVKLACH--ILTGEMVAIKIMDKNTLGSDLPRIKTEIE 60
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
LK + H +I +L ++V E+ G L D++ S D L+ ++ +
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ-----DRLSEEETRVVFR 115
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
+ +A+ Y+H + Y H++LK N+L D + K+ +FGL + ++ Y LQ
Sbjct: 116 QIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK----DYHLQT 168
Query: 527 TRHVVGTYGYMAPEYIE-NGVITPKLDVFAFGVVVLELLSG 566
G+ Y APE I+ + + DV++ G+++ L+ G
Sbjct: 169 C---CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 34/207 (16%)
Query: 380 GSVYRGSF--KGDDAAVKVM------KGDVSSEINILKKI-NHSNIIRLSGFCVH----- 425
G VY+G G AA+KVM + ++ EIN+LKK +H NI G +
Sbjct: 38 GQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97
Query: 426 -EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYV 484
+ +LV EF G+++D + + + T L + I ++ L++LH++ +
Sbjct: 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNT---LKEEWIAYICREILRGLSHLHQHK---VI 151
Query: 485 HKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI-- 542
H+++K N+LL N K+ +FG+ SA+ D G + T +GT +MAPE I
Sbjct: 152 HRDIKGQNVLLTENAEVKLVDFGV--SAQLDR----TVGRRNT--FIGTPYWMAPEVIAC 203
Query: 543 -ENGVITP--KLDVFAFGVVVLELLSG 566
EN T K D+++ G+ +E+ G
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 380 GSVYRGSFK--GDDAAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTY 430
G VY+ K G AA KV++ D EI IL +H I++L G H+G +
Sbjct: 25 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 84
Query: 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
++ EF GA+ + + LT Q + + ALN+LH + +H++LK
Sbjct: 85 IMIEFCPGGAVD----AIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKA 137
Query: 491 SNILLDTNLRAKITNFGL-ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI--ENGVI 547
N+L+ ++ +FG+ A++ ++ LQ +GT +MAPE + E
Sbjct: 138 GNVLMTLEGDIRLADFGVSAKNLKT---------LQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 548 TP---KLDVFAFGVVVLEL 563
TP K D+++ G+ ++E+
Sbjct: 189 TPYDYKADIWSLGITLIEM 207
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 125/301 (41%), Gaps = 50/301 (16%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-----AAVKVMKGDVSSEIN-------- 406
Y+ Q +I G E + G V++G + + A+K K S +
Sbjct: 385 YEIQRERIELGRCIGEGQF-GDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 407 ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
+++ +H +I++L G + E +++ E G L +L ++ +L + AY
Sbjct: 444 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKF----SLDLASLILYAY 498
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
++ AL YL + +VH+++ N+L+ K+ +FGL+R E + + G
Sbjct: 499 QLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE-LLSGREAVTGDQNCEAELLYASI 585
+ +MAPE I T DV+ FGV + E L+ G + G +N +
Sbjct: 556 IK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------- 600
Query: 586 SRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645
+ G I+ R P + ++ L C A+D + RP +E+ LS
Sbjct: 601 ------------VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 648
Query: 646 I 646
I
Sbjct: 649 I 649
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 380 GSVYRGSFK--GDDAAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTY 430
G VY+ K G AA KV++ D EI IL +H I++L G H+G +
Sbjct: 33 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92
Query: 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
++ EF GA+ + + LT Q + + ALN+LH + +H++LK
Sbjct: 93 IMIEFCPGGAVD----AIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKA 145
Query: 491 SNILLDTNLRAKITNFGL-ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI--ENGVI 547
N+L+ ++ +FG+ A++ ++ LQ +GT +MAPE + E
Sbjct: 146 GNVLMTLEGDIRLADFGVSAKNLKT---------LQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 548 TP---KLDVFAFGVVVLEL 563
TP K D+++ G+ ++E+
Sbjct: 197 TPYDYKADIWSLGITLIEM 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 46/281 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-----KGDVSSEINILKKINHSNIIRLSG 421
+ G F++ I + + F G ++ + +S EI+I + + H +++ G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNP 481
F ++V E +L + LH R LT + + YLH+
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE-LHKRR----KALTEPEARYYLRQIVLGCQYLHRNR-- 135
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY 541
+H++LK N+ L+ +L KI +FGLA E D + + + GT Y+APE
Sbjct: 136 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--------KVLCGTPNYIAPEV 186
Query: 542 IENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
+ + ++DV++ G ++ LL G+ + +C L+E+ +R K
Sbjct: 187 LSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSC------------LKETYLRIK---- 228
Query: 602 IDPSLRNEY--PLDLAFSMAQLAKNCTAHDLNARPSISEVF 640
+NEY P + A L + D ARP+I+E+
Sbjct: 229 -----KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 56/259 (21%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGN-------------TYLVYEFADNGALSDWLHS 447
+ SE+ +L +NH ++R + N ++ E+ +NG L D +HS
Sbjct: 49 ILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS 108
Query: 448 NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507
+ W+ QI AL+Y+H + +H++LK NI +D + KI +FG
Sbjct: 109 ENLNQQRDEYWRLFRQIL----EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFG 161
Query: 508 LARSAES-------DEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVV 559
LA++ D G LT +GT Y+A E ++ G K+D+++ G++
Sbjct: 162 LAKNVHRSLDILKLDSQNLPGSSDNLTS-AIGTAMYVATEVLDGTGHYNEKIDMYSLGII 220
Query: 560 VLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMA 619
E++ S +E N+ +KLR S+ E+P D +
Sbjct: 221 FFEMI------------------YPFSTGMERVNILKKLR-----SVSIEFPPDFDDNKM 257
Query: 620 QLAKNCTA----HDLNARP 634
++ K HD N RP
Sbjct: 258 KVEKKIIRLLIDHDPNKRP 276
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 27/225 (12%)
Query: 352 SAVESLTLYKFQDLKI-ATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS---S 403
A+ +T+ +F+ LK+ G+F + + + G Y + K V V K +V+ +
Sbjct: 1 GAMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYY--AMKILKKEVIVAKDEVAHTLT 58
Query: 404 EINILKKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
E +L+ H + L F H+ + V E+A+ G L L R + D +
Sbjct: 59 ENRVLQNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSEDRARF---- 113
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
++ +AL+YLH N V+++LK N++LD + KIT+FGL + D
Sbjct: 114 -YGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD------- 163
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
G + + GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 164 GATM-KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 8 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + + + LT I
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSY 111
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 160
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 41/211 (19%)
Query: 378 IQGSVYRGSFKGDDAAVKVM---------------KGDVSSEINILKKI-NHSNIIRLSG 421
++ V+R + G + AVK+M + E +IL+++ H +II L
Sbjct: 110 VRRCVHRAT--GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNP 481
+LV++ G L D+L L+ K+ I + A+++LH
Sbjct: 168 SYESSSFMFLVFDLMRKGELFDYLTEKV-----ALSEKETRSIMRSLLEAVSFLHANN-- 220
Query: 482 PYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY 541
VH++LK NILLD N++ ++++FG + E E R + GT GY+APE
Sbjct: 221 -IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK---------LRELCGTPGYLAPEI 270
Query: 542 IENGV------ITPKLDVFAFGVVVLELLSG 566
++ + ++D++A GV++ LL+G
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVA 469
+++H NI+ + + YLV E+ + LS+++ S+ L+ + +
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH-----GPLSVDTAINFTNQIL 121
Query: 470 NALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRH 529
+ + + H + VH+++K NIL+D+N KI +FG+A++ L T H
Sbjct: 122 DGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE-------TSLTQTNH 171
Query: 530 VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGD 573
V+GT Y +PE + D+++ G+V+ E+L G G+
Sbjct: 172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 26/172 (15%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGAL-SDWLHSNRYQTSDNLTWK 459
+ E I +K+ H NI+RL E YLV++ G L D + Y +D
Sbjct: 51 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 110
Query: 460 QRV--QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA---KITNFGLARSAES 514
Q++ IAY +N + VH+NLK N+LL + + K+ +FGLA
Sbjct: 111 QQILESIAYCHSNGI-----------VHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 159
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
E G GT GY++PE ++ + +D++A GV++ LL G
Sbjct: 160 SEAWHG---------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 26/172 (15%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGAL-SDWLHSNRYQTSDNLTWK 459
+ E I +K+ H NI+RL E YLV++ G L D + Y +D
Sbjct: 75 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 134
Query: 460 QRV--QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA---KITNFGLARSAES 514
Q++ IAY +N + VH+NLK N+LL + + K+ +FGLA
Sbjct: 135 QQILESIAYCHSNGI-----------VHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
E G GT GY++PE ++ + +D++A GV++ LL G
Sbjct: 184 SEAWHG---------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 26/172 (15%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGAL-SDWLHSNRYQTSDNLTWK 459
+ E I +K+ H NI+RL E YLV++ G L D + Y +D
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 111
Query: 460 QRV--QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA---KITNFGLARSAES 514
Q++ IAY +N + VH+NLK N+LL + + K+ +FGLA
Sbjct: 112 QQILESIAYCHSNGI-----------VHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
E G GT GY++PE ++ + +D++A GV++ LL G
Sbjct: 161 SEAWHG---------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 26/172 (15%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGAL-SDWLHSNRYQTSDNLTWK 459
+ E I +K+ H NI+RL E YLV++ G L D + Y +D
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 111
Query: 460 QRV--QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA---KITNFGLARSAES 514
Q++ IAY +N + VH+NLK N+LL + + K+ +FGLA
Sbjct: 112 QQILESIAYCHSNGI-----------VHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
E G GT GY++PE ++ + +D++A GV++ LL G
Sbjct: 161 SEAWHG---------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 33/224 (14%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVS------SEINILKKINHSNIIRLS 420
I GS+ E ++ +V +G+ + AA K+ K V EI I+K ++H NIIRL
Sbjct: 17 IGRGSWGE---VKIAVQKGT-RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 421 GFCVHEGNTYLVYEFADNGALSDW-LHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT 479
+ YLV E G L + +H ++ SD +I DV +A+ Y HK
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA------ARIMKDVLSAVAYCHKLN 126
Query: 480 NPPYVHKNLKTSNILLDT---NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGY 536
H++LK N L T + K+ +FGLA + ++ R VGT Y
Sbjct: 127 ---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG---------KMMRTKVGTPYY 174
Query: 537 MAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
++P+ +E G+ P+ D ++ GV++ LL G + + E L
Sbjct: 175 VSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVML 217
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 37/226 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVS------SEINILKKINHSNIIRLS 420
I GS+ E ++ +V +G+ + AA K+ K V EI I+K ++H NIIRL
Sbjct: 34 IGRGSWGE---VKIAVQKGT-RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL- 88
Query: 421 GFCVHEGNT--YLVYEFADNGALSDW-LHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK 477
+ E NT YLV E G L + +H ++ SD +I DV +A+ Y HK
Sbjct: 89 -YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA------ARIMKDVLSAVAYCHK 141
Query: 478 YTNPPYVHKNLKTSNILLDT---NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H++LK N L T + K+ +FGLA + ++ R VGT
Sbjct: 142 LN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG---------KMMRTKVGTP 189
Query: 535 GYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAEL 580
Y++P+ +E G+ P+ D ++ GV++ LL G + + E L
Sbjct: 190 YYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVML 234
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 367 IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGF 422
I TGS+ +I+ G + + + K + SE+N+L+++ H NI+R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 423 CVHEGNT--YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
+ NT Y+V E+ + G L+ + + + L + +++ + AL H+ ++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 481 PPY--VHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMA 538
+ +H++LK +N+ LD K+ +FGLAR D + VGT YM+
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT--------SFAKAFVGTPYYMS 184
Query: 539 PEYIENGVITPKLDVFAFGVVVLEL 563
PE + K D+++ G ++ EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 115/268 (42%), Gaps = 52/268 (19%)
Query: 362 FQDLK-IATGSFSEENRIQGSVY--RGSFKGDDAAVKVMK----------GDVSSEINIL 408
F DL+ I GSF G+VY R + A+K M D+ E+ L
Sbjct: 56 FSDLREIGHGSF-------GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 108
Query: 409 KKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA--- 465
+K+ H N I+ G + E +LV E+ G+ SD L ++ Q V+IA
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPL-------QEVEIAAVT 160
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ L YLH + +H+++K NILL K+ +FG A +
Sbjct: 161 HGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASI------------MA 205
Query: 526 LTRHVVGTYGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582
VGT +MAPE I + G K+DV++ G+ +E L+ R+ + N + L +
Sbjct: 206 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNMNAMSALYH 264
Query: 583 ASI--SRVLEESNVREKLRGFIDPSLRN 608
+ S L+ + E R F+D L+
Sbjct: 265 IAQNESPALQSGHWSEYFRNFVDSCLQK 292
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 367 IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGF 422
I TGS+ +I+ G + + + K + SE+N+L+++ H NI+R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 423 CVHEGNT--YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
+ NT Y+V E+ + G L+ + + + L + +++ + AL H+ ++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 481 PPY--VHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMA 538
+ +H++LK +N+ LD K+ +FGLAR D + VGT YM+
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT--------SFAKTFVGTPYYMS 184
Query: 539 PEYIENGVITPKLDVFAFGVVVLEL 563
PE + K D+++ G ++ EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 398 KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD--- 454
K +S+EI I K +++ +++ GF + Y+V E +L + LH R ++
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA 144
Query: 455 NLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514
+Q +Q + YLH N +H++LK N+ L+ ++ KI +FGLA E
Sbjct: 145 RYFMRQTIQ-------GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF 194
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
D + + + GT Y+APE + + ++D+++ G ++ LL G+ +
Sbjct: 195 DGERK--------KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ET 244
Query: 575 NCEAELLYASISRVLEESNVREKLRGFIDPSLRNEY--PLDLAFSMAQLAKNCTAHDLNA 632
+C L+E+ +R K +NEY P + + L + D
Sbjct: 245 SC------------LKETYIRIK---------KNEYSVPRHINPVASALIRRMLHADPTL 283
Query: 633 RPSISEVF 640
RPS++E+
Sbjct: 284 RPSVAELL 291
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+ ++ D +E I++LK
Sbjct: 5 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK 57
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 108
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 157
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 45/234 (19%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+ ++ D +E I++LK
Sbjct: 4 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK 56
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIA-- 465
++NH NI++L E YLV+EF LH + ++ + LT I
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 107
Query: 466 -YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G +
Sbjct: 108 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------GVPV 156
Query: 525 QLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 39/215 (18%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDD------AAVKVMKGDVSSEIN--------ILKKIN 412
+ +G+F G+VY+G + D A+KV++ + S + N ++ +
Sbjct: 25 LGSGAF-------GTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQRVQIAYDVAN 470
+ RL G C+ LV + G L D + NR + + D L W +A
Sbjct: 78 SPYVSRLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAK 130
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHV 530
++YL VH++L N+L+ + KIT+FGLAR + DE E G ++
Sbjct: 131 GMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV---- 183
Query: 531 VGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+MA E I T + DV+++GV V EL++
Sbjct: 184 --PIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 398 KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD--- 454
K +S+EI I K +++ +++ GF + Y+V E +L + LH R ++
Sbjct: 70 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA 128
Query: 455 NLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514
+Q +Q + YLH N +H++LK N+ L+ ++ KI +FGLA E
Sbjct: 129 RYFMRQTIQ-------GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF 178
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
D + + + GT Y+APE + + ++D+++ G ++ LL G+ +
Sbjct: 179 DGERK--------KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ET 228
Query: 575 NCEAELLYASISRVLEESNVREKLRGFIDPSLRNEY--PLDLAFSMAQLAKNCTAHDLNA 632
+C L+E+ +R K +NEY P + + L + D
Sbjct: 229 SC------------LKETYIRIK---------KNEYSVPRHINPVASALIRRMLHADPTL 267
Query: 633 RPSISEVF 640
RPS++E+
Sbjct: 268 RPSVAELL 275
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 398 KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD--- 454
K +S+EI I K +++ +++ GF + Y+V E +L + LH R ++
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA 144
Query: 455 NLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514
+Q +Q + YLH N +H++LK N+ L+ ++ KI +FGLA E
Sbjct: 145 RYFMRQTIQ-------GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF 194
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
D + + + GT Y+APE + + ++D+++ G ++ LL G+ +
Sbjct: 195 DGERK--------KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ET 244
Query: 575 NCEAELLYASISRVLEESNVREKLRGFIDPSLRNEY--PLDLAFSMAQLAKNCTAHDLNA 632
+C L+E+ +R K +NEY P + + L + D
Sbjct: 245 SC------------LKETYIRIK---------KNEYSVPRHINPVASALIRRMLHADPTL 283
Query: 633 RPSISEVF 640
RPS++E+
Sbjct: 284 RPSVAELL 291
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLK 489
++ EF D G L W+ R + D + +++ + ++Y+H + +H++LK
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEKLDKVL---ALELFEQITKGVDYIH---SKKLIHRDLK 163
Query: 490 TSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
SNI L + KI +FGL S ++D + TR GT YM+PE I +
Sbjct: 164 PSNIFLVDTKQVKIGDFGLVTSLKNDG--------KRTRS-KGTLRYMSPEQISSQDYGK 214
Query: 550 KLDVFAFGVVVLELL 564
++D++A G+++ ELL
Sbjct: 215 EVDLYALGLILAELL 229
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ--TSDNLTWKQR 461
EI IL + H N+I + + D + D + ++ Y+ S L+
Sbjct: 91 EIQILLRFRHENVIGIRDIL----RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHI 146
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
Y + L Y+H +H++LK SN+L++T KI +FGLAR A+ EH+ G
Sbjct: 147 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADP-EHDHTG 202
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
+ LT V T Y APE + N T +D+++ G ++ E+LS R G
Sbjct: 203 F---LT-EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 380 GSVYRGSFKGDDAAVKVM----KGDVSSEINILKK--INHSNIIRLSGFCVHEGNT---- 429
G+VY+GS AVKV + + +E NI + + H NI R F V +
Sbjct: 27 GAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIAR---FIVGDERVTADG 83
Query: 430 ----YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH------KYT 479
LV E+ NG+L +L TSD W ++A+ V L YLH +
Sbjct: 84 RMEYLLVMEYYPNGSLXKYLS---LHTSD---WVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 480 NPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAP 539
P H++L + N+L+ + I++FGL+ + + G VGT YMAP
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197
Query: 540 EYIENGV-------ITPKLDVFAFGVVVLELL 564
E +E V ++D++A G++ E+
Sbjct: 198 EVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 115/268 (42%), Gaps = 52/268 (19%)
Query: 362 FQDLK-IATGSFSEENRIQGSVY--RGSFKGDDAAVKVMK----------GDVSSEINIL 408
F DL+ I GSF G+VY R + A+K M D+ E+ L
Sbjct: 17 FSDLREIGHGSF-------GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69
Query: 409 KKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA--- 465
+K+ H N I+ G + E +LV E+ G+ SD L ++ Q V+IA
Sbjct: 70 QKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPL-------QEVEIAAVT 121
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ L YLH + +H+++K NILL K+ +FG A +
Sbjct: 122 HGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASI------------MA 166
Query: 526 LTRHVVGTYGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582
VGT +MAPE I + G K+DV++ G+ +E L+ R+ + N + L +
Sbjct: 167 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNMNAMSALYH 225
Query: 583 ASI--SRVLEESNVREKLRGFIDPSLRN 608
+ S L+ + E R F+D L+
Sbjct: 226 IAQNESPALQSGHWSEYFRNFVDSCLQK 253
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 41/245 (16%)
Query: 398 KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
K +S+EI I K +++ +++ GF + Y+V E +L + + T
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR 145
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ R I + YLH N +H++LK N+ L+ ++ KI +FGLA E D
Sbjct: 146 YFMRQTI-----QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE 197
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ + + GT Y+APE + + ++D+++ G ++ LL G+ + +C
Sbjct: 198 RK--------KTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSC- 246
Query: 578 AELLYASISRVLEESNVREKLRGFIDPSLRNEY--PLDLAFSMAQLAKNCTAHDLNARPS 635
L+E+ +R K +NEY P + + L + D RPS
Sbjct: 247 -----------LKETYIRIK---------KNEYSVPRHINPVASALIRRMLHADPTLRPS 286
Query: 636 ISEVF 640
++E+
Sbjct: 287 VAELL 291
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 357 LTLYKFQDLKI-ATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS---SEINIL 408
+T+ +F+ LK+ G+F + + + G Y + K V V K +V+ +E +L
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYY--AMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 409 KKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+ H + L F H+ + V E+A+ G L L R + D + +
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSEDRARF-----YGAE 118
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT 527
+ +AL+YLH N V+++LK N++LD + KIT+FGL + D G +
Sbjct: 119 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-------GATM- 168
Query: 528 RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 169 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 380 GSVYRGSFKGDD--AAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTY 430
G VY+ K AA KV+ D EI+IL +H NI++L +E N +
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
++ EF GA+ + + LT Q + +ALNYLH + +H++LK
Sbjct: 111 ILIEFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKA 163
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI--ENGVIT 548
NIL + K+ +FG++ + +Q +GT +MAPE + E
Sbjct: 164 GNILFTLDGDIKLADFGVSA--------KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 549 P---KLDVFAFGVVVLEL 563
P K DV++ G+ ++E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 380 GSVYRGSFKGDD--AAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTY 430
G VY+ K AA KV+ D EI+IL +H NI++L +E N +
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
++ EF GA+ + + LT Q + +ALNYLH + +H++LK
Sbjct: 111 ILIEFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKA 163
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI--ENGVIT 548
NIL + K+ +FG++ + +Q +GT +MAPE + E
Sbjct: 164 GNILFTLDGDIKLADFGVSA--------KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 549 P---KLDVFAFGVVVLEL 563
P K DV++ G+ ++E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 380 GSVYRGSFKGDD--AAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTY 430
G VY+ K AA KV+ D EI+IL +H NI++L +E N +
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
++ EF GA+ + + LT Q + +ALNYLH + +H++LK
Sbjct: 111 ILIEFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKA 163
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI--ENGVIT 548
NIL + K+ +FG++ + +Q +GT +MAPE + E
Sbjct: 164 GNILFTLDGDIKLADFGVSA--------KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 549 P---KLDVFAFGVVVLEL 563
P K DV++ G+ ++E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGF 422
I +G F + ++RI G Y VK E+ L K++H NI+ +G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIK------RVKYNNEKAEREVKALAKLDHVNIVHYNG- 71
Query: 423 C---------VHEGNT--------YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
C N+ ++ EF D G L W+ R + D + +++
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL---ALELF 128
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+ ++Y+H + ++++LK SNI L + KI +FGL S ++D
Sbjct: 129 EQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX------ 179
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELL 564
GT YM+PE I + ++D++A G+++ ELL
Sbjct: 180 ---RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
M+G + EI+ L+ + H +II+L + +V E+A N L D++ D +
Sbjct: 47 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKM 100
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ ++ + + +A+ Y H++ VH++LK N+LLD +L KI +FGL S+
Sbjct: 101 SEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGL-----SNI 152
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT-PKLDVFAFGVVVLELLSGR 567
G + + G+ Y APE I + P++DV++ GV++ +L R
Sbjct: 153 MTDGNF----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
M+G + EI+ L+ + H +II+L + +V E+A N L D++ D +
Sbjct: 51 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKM 104
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ ++ + + +A+ Y H++ VH++LK N+LLD +L KI +FGL S+
Sbjct: 105 SEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGL-----SNI 156
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT-PKLDVFAFGVVVLELLSGR 567
G + + G+ Y APE I + P++DV++ GV++ +L R
Sbjct: 157 MTDGNF----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 28/198 (14%)
Query: 380 GSVYRGS--FKGDDAAVKVM-------KGDVSSEINILKKINHSNIIR-LSGFCVHEGNT 429
G+VY G + A++ M K + +EI ++++ + NI+ L + V +
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-EL 93
Query: 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLK 489
++V E+ G+L+D + T + Q + + AL +LH +H+N+K
Sbjct: 94 WVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRNIK 144
Query: 490 TSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
+ NILL + K+T+FG ++ ++ +VGT +MAPE + P
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITPEQSKRS--------TMVGTPYWMAPEVVTRKAYGP 196
Query: 550 KLDVFAFGVVVLELLSGR 567
K+D+++ G++ +E++ G
Sbjct: 197 KVDIWSLGIMAIEMIEGE 214
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 124/307 (40%), Gaps = 61/307 (19%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDA---AVKVMKGD--------VSSEINILKKI-NHS 414
+ G+F + ++ + Y G K D A AVK++K + SE+ +L + NH
Sbjct: 54 LGAGAFGK--VVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 415 NIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-----YQTSDNLTWKQRV------- 462
NI+ L G C G T ++ E+ G L ++L R +TS + +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 463 -QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE--Q 519
+Y VA + +L + +H++L NILL KI +FGLAR ++D + +
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
G L + +MAPE I N V T + DV+++G+ + EL S G G
Sbjct: 228 GNARLPVK--------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG------ 273
Query: 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638
V K I R P M + K C D RP+ +
Sbjct: 274 -------------MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 320
Query: 639 VFVTLSK 645
+ + K
Sbjct: 321 IVQLIEK 327
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 124/307 (40%), Gaps = 61/307 (19%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDA---AVKVMKGD--------VSSEINILKKI-NHS 414
+ G+F + ++ + Y G K D A AVK++K + SE+ +L + NH
Sbjct: 31 LGAGAFGKV--VEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 87
Query: 415 NIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-----YQTSDNLTWKQRV------- 462
NI+ L G C G T ++ E+ G L ++L R +TS + +
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 463 -QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE--Q 519
+Y VA + +L + +H++L NILL KI +FGLAR ++D + +
Sbjct: 148 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
G L + +MAPE I N V T + DV+++G+ + EL S G G
Sbjct: 205 GNARLPVK--------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG------ 250
Query: 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638
V K I R P M + K C D RP+ +
Sbjct: 251 -------------MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 297
Query: 639 VFVTLSK 645
+ + K
Sbjct: 298 IVQLIEK 304
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 124/307 (40%), Gaps = 61/307 (19%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDA---AVKVMKGD--------VSSEINILKKI-NHS 414
+ G+F + ++ + Y G K D A AVK++K + SE+ +L + NH
Sbjct: 49 LGAGAFGK--VVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 105
Query: 415 NIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-----YQTSDNLTWKQRV------- 462
NI+ L G C G T ++ E+ G L ++L R +TS + +
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 463 -QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE--Q 519
+Y VA + +L + +H++L NILL KI +FGLAR ++D + +
Sbjct: 166 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
G L + +MAPE I N V T + DV+++G+ + EL S G G
Sbjct: 223 GNARLPVK--------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG------ 268
Query: 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638
V K I R P M + K C D RP+ +
Sbjct: 269 -------------MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 315
Query: 639 VFVTLSK 645
+ + K
Sbjct: 316 IVQLIEK 322
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 357 LTLYKFQDLKI-ATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS---SEINIL 408
+T+ +F+ LK+ G+F + + + G Y + K V V K +V+ +E +L
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYY--AMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 409 KKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+ H + L F H+ + V E+A+ G L L R + D + +
Sbjct: 63 QNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSEDRARF-----YGAE 116
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT 527
+ +AL+YLH N V+++LK N++LD + KIT+FGL + D G +
Sbjct: 117 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-------GATM- 166
Query: 528 RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 167 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
M+G + EI+ L+ + H +II+L + +V E+A N L D++ D +
Sbjct: 57 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKM 110
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ ++ + + +A+ Y H++ VH++LK N+LLD +L KI +FGL S+
Sbjct: 111 SEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGL-----SNI 162
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT-PKLDVFAFGVVVLELLSGR 567
G + + G+ Y APE I + P++DV++ GV++ +L R
Sbjct: 163 MTDGNF----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
M+G + EI+ L+ + H +II+L + +V E+A N L D++ D +
Sbjct: 56 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKM 109
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ ++ + + +A+ Y H++ VH++LK N+LLD +L KI +FGL S+
Sbjct: 110 SEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGL-----SNI 161
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT-PKLDVFAFGVVVLELLSGR 567
G + + G+ Y APE I + P++DV++ GV++ +L R
Sbjct: 162 MTDGNF----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 28/198 (14%)
Query: 380 GSVYRGSFKGDD--AAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTY 430
G VY+ K AA KV+ D EI+IL +H NI++L +E N +
Sbjct: 24 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 83
Query: 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
++ EF GA+ + + LT Q + +ALNYLH + +H++LK
Sbjct: 84 ILIEFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKA 136
Query: 491 SNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI--ENGVIT 548
NIL + K+ +FG++ + +Q +GT +MAPE + E
Sbjct: 137 GNILFTLDGDIKLADFGVSA-------KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 549 P---KLDVFAFGVVVLEL 563
P K DV++ G+ ++E+
Sbjct: 190 PYDYKADVWSLGITLIEM 207
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 124/307 (40%), Gaps = 61/307 (19%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDA---AVKVMKGD--------VSSEINILKKI-NHS 414
+ G+F + ++ + Y G K D A AVK++K + SE+ +L + NH
Sbjct: 54 LGAGAFGKV--VEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 415 NIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-----YQTSDNLTWKQRV------- 462
NI+ L G C G T ++ E+ G L ++L R +TS + +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 463 -QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE--Q 519
+Y VA + +L + +H++L NILL KI +FGLAR ++D + +
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
G L + +MAPE I N V T + DV+++G+ + EL S G G
Sbjct: 228 GNARLPVK--------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG------ 273
Query: 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638
V K I R P M + K C D RP+ +
Sbjct: 274 -------------MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 320
Query: 639 VFVTLSK 645
+ + K
Sbjct: 321 IVQLIEK 327
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 357 LTLYKFQDLKI-ATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS---SEINIL 408
+T+ +F+ LK+ G+F + + + G Y + K V V K +V+ +E +L
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYY--AMKILKKEVIVAKDEVAHTLTENRVL 202
Query: 409 KKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+ H + L F H+ + V E+A+ G L L R + D + +
Sbjct: 203 QNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSEDRARF-----YGAE 256
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT 527
+ +AL+YLH N V+++LK N++LD + KIT+FGL + D G +
Sbjct: 257 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-------GATM- 306
Query: 528 RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 357 LTLYKFQDLKI-ATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS---SEINIL 408
+T+ +F+ LK+ G+F + + + G Y + K V V K +V+ +E +L
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYY--AMKILKKEVIVAKDEVAHTLTENRVL 205
Query: 409 KKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+ H + L F H+ + V E+A+ G L L R + D + +
Sbjct: 206 QNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSEDRARF-----YGAE 259
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT 527
+ +AL+YLH N V+++LK N++LD + KIT+FGL + D G +
Sbjct: 260 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-------GATM- 309
Query: 528 RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 310 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 372 FSEENRIQGSVYRGSFK---GDDAAVKVM---------KGDVSSEINILKKINHSNIIRL 419
F E + SV R K G + A K++ + E I + + H NI+RL
Sbjct: 9 FEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 420 SGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT 479
EG YLV++ G L + + + Y + + + + ++N+ H
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNHCHLNG 123
Query: 480 NPPYVHKNLKTSNILLDTNLRA---KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGY 536
VH++LK N+LL + + K+ +FGLA + D+ G+ GT GY
Sbjct: 124 ---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--------GTPGY 172
Query: 537 MAPEYIENGVITPKLDVFAFGVVVLELLSG 566
++PE + +D++A GV++ LL G
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 372 FSEENRIQGSVYRGSFK---GDDAAVKVM---------KGDVSSEINILKKINHSNIIRL 419
F E + SV R K G + A K++ + E I + + H NI+RL
Sbjct: 9 FEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 420 SGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT 479
EG YLV++ G L + + + Y + + + + ++N+ H
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNHCHLNG 123
Query: 480 NPPYVHKNLKTSNILLDTNLRA---KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGY 536
VH++LK N+LL + + K+ +FGLA + D+ G+ GT GY
Sbjct: 124 ---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--------GTPGY 172
Query: 537 MAPEYIENGVITPKLDVFAFGVVVLELLSG 566
++PE + +D++A GV++ LL G
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 124/307 (40%), Gaps = 61/307 (19%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDA---AVKVMKGD--------VSSEINILKKI-NHS 414
+ G+F + ++ + Y G K D A AVK++K + SE+ +L + NH
Sbjct: 47 LGAGAFGK--VVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 103
Query: 415 NIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-----YQTSDNLTWKQRV------- 462
NI+ L G C G T ++ E+ G L ++L R +TS + +
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 463 -QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQ 519
+Y VA + +L + +H++L NILL KI +FGLAR ++D + +
Sbjct: 164 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
G L + +MAPE I N V T + DV+++G+ + EL S G G
Sbjct: 221 GNARLPVK--------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG------ 266
Query: 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638
V K I R P M + K C D RP+ +
Sbjct: 267 -------------MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 313
Query: 639 VFVTLSK 645
+ + K
Sbjct: 314 IVQLIEK 320
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 38/237 (16%)
Query: 343 SLSHPQGF---RSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRG--SFKGDDAAVKVM 397
S++H +GF S V+ L+ D +I GSF G VY+G + + A+K++
Sbjct: 1 SMAHLRGFANQHSRVDPEELFTKLD-RIGKGSF-------GEVYKGIDNHTKEVVAIKII 52
Query: 398 --------KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR 449
D+ EI +L + + I R G + +++ E+ G+ D L
Sbjct: 53 DLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP 112
Query: 450 YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509
+ + T I ++ L+YLH +H+++K +N+LL K+ +FG+A
Sbjct: 113 LEETYIAT------ILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA 163
Query: 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+ ++ + VGT +MAPE I+ K D+++ G+ +EL G
Sbjct: 164 GQLTDTQIKRNXF--------VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + EI I ++H NI+RL + YL+ E+A G L L Q S
Sbjct: 66 VEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL-----QKSCTF 120
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
++ I ++A+AL Y H +H+++K N+LL KI +FG + A S
Sbjct: 121 DEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS-- 175
Query: 517 HEQGGYGLQLTRHVV-GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
L R + GT Y+ PE IE + K+D++ GV+ ELL G
Sbjct: 176 ---------LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 28/198 (14%)
Query: 380 GSVYRGS--FKGDDAAVKVM-------KGDVSSEINILKKINHSNIIR-LSGFCVHEGNT 429
G+VY G + A++ M K + +EI ++++ + NI+ L + V +
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-EL 92
Query: 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLK 489
++V E+ G+L+D + T + Q + + AL +LH +H+++K
Sbjct: 93 WVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK 143
Query: 490 TSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
+ NILL + K+T+FG ++ ++ +VGT +MAPE + P
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRS--------EMVGTPYWMAPEVVTRKAYGP 195
Query: 550 KLDVFAFGVVVLELLSGR 567
K+D+++ G++ +E++ G
Sbjct: 196 KVDIWSLGIMAIEMIEGE 213
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 398 KGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR------- 449
K + SE+ I+ + H NI+ L G C H G ++ E+ G L ++L R
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYS 152
Query: 450 YQTSDN----LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITN 505
Y S N L+ + + + VA + +L + +H+++ N+LL AKI +
Sbjct: 153 YNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGD 209
Query: 506 FGLARSAESDEHE--QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 563
FGLAR +D + +G L + +MAPE I + V T + DV+++G+++ E+
Sbjct: 210 FGLARDIMNDSNYIVKGNARLPVK--------WMAPESIFDCVYTVQSDVWSYGILLWEI 261
Query: 564 LS 565
S
Sbjct: 262 FS 263
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLK 489
Y+ + L DW+ NR + ++ + I +A A+ +LH +H++LK
Sbjct: 137 YIQMQLCRKENLKDWM--NRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLK 191
Query: 490 TSNILLDTNLRAKITNFGLARSAESDEHEQG------GYGLQLTRHVVGTYGYMAPEYIE 543
SNI + K+ +FGL + + DE EQ Y + VGT YM+PE I
Sbjct: 192 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ--VGTKLYMSPEQIH 249
Query: 544 NGVITPKLDVFAFGVVVLELL 564
+ K+D+F+ G+++ ELL
Sbjct: 250 GNNYSHKVDIFSLGLILFELL 270
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 380 GSVYRGSFKGDDA-----AVKVMKGDVSSEINI---------LKKINHSNIIRLSGFCVH 425
GSV K +D AVK++K D+ + +I +K+ +H ++ +L G +
Sbjct: 37 GSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96
Query: 426 EGNT------YLVYEFADNGALSDWLHSNRY-QTSDNLTWKQRVQIAYDVANALNYLHKY 478
++ F +G L +L ++R + NL + V+ D+A + YL
Sbjct: 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL--- 153
Query: 479 TNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMA 538
++ ++H++L N +L ++ + +FGL+R S ++ + G +L ++A
Sbjct: 154 SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL------PVKWLA 207
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCE 577
E + + + T DV+AFGV + E+++ G+ G +N E
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE 247
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 28/198 (14%)
Query: 380 GSVYRGS--FKGDDAAVKVM-------KGDVSSEINILKKINHSNIIR-LSGFCVHEGNT 429
G+VY G + A++ M K + +EI ++++ + NI+ L + V +
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-EL 93
Query: 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLK 489
++V E+ G+L+D + T + Q + + AL +LH +H+++K
Sbjct: 94 WVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK 144
Query: 490 TSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
+ NILL + K+T+FG ++ ++ +VGT +MAPE + P
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITPEQSKRS--------XMVGTPYWMAPEVVTRKAYGP 196
Query: 550 KLDVFAFGVVVLELLSGR 567
K+D+++ G++ +E++ G
Sbjct: 197 KVDIWSLGIMAIEMIEGE 214
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 51/237 (21%)
Query: 362 FQDL-KIATGSFSEENRIQGSVY--RGSFKGDDAAVKVMKGDVSSE---------INILK 409
FQ + KI G++ G VY R G+ A+K ++ D +E I++LK
Sbjct: 4 FQKVEKIGEGTY-------GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYE--------FADNGALSDWLHSNRYQTSDNLTWKQR 461
++NH NI++L E YLV+E F D AL+ +
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALT------------GIPLPLI 104
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
+ + L + H + +H++LK N+L++T K+ +FGLAR+ G
Sbjct: 105 KSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--------G 153
Query: 522 YGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
++ H V T Y APE + + +D+++ G + E+++ R GD +
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 28/198 (14%)
Query: 380 GSVYRGS--FKGDDAAVKVM-------KGDVSSEINILKKINHSNIIR-LSGFCVHEGNT 429
G+VY G + A++ M K + +EI ++++ + NI+ L + V +
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-EL 92
Query: 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLK 489
++V E+ G+L+D + T + Q + + AL +LH +H+++K
Sbjct: 93 WVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK 143
Query: 490 TSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
+ NILL + K+T+FG ++ ++ +VGT +MAPE + P
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRS--------XMVGTPYWMAPEVVTRKAYGP 195
Query: 550 KLDVFAFGVVVLELLSGR 567
K+D+++ G++ +E++ G
Sbjct: 196 KVDIWSLGIMAIEMIEGE 213
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 24/249 (9%)
Query: 366 KIATGSFSE-----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLS 420
KI GSF E +NR Q V D + D+ EI +L + + + +
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 421 GFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
G + + +++ E+ G+ D L + Q I ++ L+YLH
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDET------QIATILREILKGLDYLHSEKK 140
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
+H+++K +N+LL + K+ +FG+A + ++ + VGT +MAPE
Sbjct: 141 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF--------VGTPFWMAPE 189
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRG 600
I+ K D+++ G+ +EL G + + L + E N + L+
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKE 249
Query: 601 FIDPSLRNE 609
F++ L E
Sbjct: 250 FVEACLNKE 258
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 28/198 (14%)
Query: 380 GSVYRGS--FKGDDAAVKVM-------KGDVSSEINILKKINHSNIIR-LSGFCVHEGNT 429
G+VY G + A++ M K + +EI ++++ + NI+ L + V +
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-EL 92
Query: 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLK 489
++V E+ G+L+D + T + Q + + AL +LH +H+++K
Sbjct: 93 WVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK 143
Query: 490 TSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITP 549
+ NILL + K+T+FG ++ ++ +VGT +MAPE + P
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRS--------TMVGTPYWMAPEVVTRKAYGP 195
Query: 550 KLDVFAFGVVVLELLSGR 567
K+D+++ G++ +E++ G
Sbjct: 196 KVDIWSLGIMAIEMIEGE 213
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 56/259 (21%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGN-------------TYLVYEFADNGALSDWLHS 447
+ SE+ +L +NH ++R + N ++ E+ +N L D +HS
Sbjct: 49 ILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS 108
Query: 448 NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507
+ W+ QI AL+Y+H + +H++LK NI +D + KI +FG
Sbjct: 109 ENLNQQRDEYWRLFRQIL----EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFG 161
Query: 508 LARSAES-------DEHEQGGYGLQLTRHVVGTYGYMAPEYIE-NGVITPKLDVFAFGVV 559
LA++ D G LT +GT Y+A E ++ G K+D+++ G++
Sbjct: 162 LAKNVHRSLDILKLDSQNLPGSSDNLTS-AIGTAMYVATEVLDGTGHYNEKIDMYSLGII 220
Query: 560 VLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMA 619
E++ S +E N+ +KLR S+ E+P D +
Sbjct: 221 FFEMI------------------YPFSTGMERVNILKKLR-----SVSIEFPPDFDDNKM 257
Query: 620 QLAKNCTA----HDLNARP 634
++ K HD N RP
Sbjct: 258 KVEKKIIRLLIDHDPNKRP 276
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 26/232 (11%)
Query: 354 VESLTLYKFQDL--KIATGSFSEENR----IQGSVYRGSFKGDDAAVKVMKGDVSSEINI 407
V+ ++Y + D+ ++ +G+F +R G V+ F + + K V +EI+I
Sbjct: 44 VKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI--NTPYPLDKYTVKNEISI 101
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
+ +++H +I L + L+ EF G L D + + Y+ S+ + +
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE----AEVINYMRQ 157
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA--KITNFGLARSAESDEHEQGGYGLQ 525
L ++H+++ VH ++K NI+ +T + KI +FGLA DE
Sbjct: 158 ACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--------- 205
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
+ + T + APE ++ + D++A GV+ LLSG G+ + E
Sbjct: 206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE 257
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 50/243 (20%)
Query: 338 PQASNSLSHPQGFRSAVESLTLYKFQDLKIATGSFSE-----ENRIQGSVYRGSFKGDDA 392
P N+++ P+ + +E +I GSF E +NR Q V
Sbjct: 12 PGMQNNIADPEELFTKLE----------RIGKGSFGEVFKGIDNRTQQVV---------- 51
Query: 393 AVKVM--------KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444
A+K++ D+ EI +L + + S + + G + +++ E+ G+ D
Sbjct: 52 AIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDL 111
Query: 445 LHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504
L + + Q + ++ L+YLH +H+++K +N+LL K+
Sbjct: 112 LRAGPFDEF------QIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLA 162
Query: 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELL 564
+FG+A + ++ + VGT +MAPE I+ K D+++ G+ +EL
Sbjct: 163 DFGVAGQLTDTQIKRNTF--------VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELA 214
Query: 565 SGR 567
G
Sbjct: 215 KGE 217
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 398 KGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN- 455
K + SE+ I+ + H NI+ L G C H G ++ E+ G L ++L D
Sbjct: 85 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 144
Query: 456 ----LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511
L + + + VA + +L + +H+++ N+LL AKI +FGLAR
Sbjct: 145 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 201
Query: 512 AESDEHE--QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+D + +G L + +MAPE I + V T + DV+++G+++ E+ S
Sbjct: 202 IMNDSNYIVKGNARLPVK--------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 398 KGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN- 455
K + SE+ I+ + H NI+ L G C H G ++ E+ G L ++L D
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 152
Query: 456 ----LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS 511
L + + + VA + +L + +H+++ N+LL AKI +FGLAR
Sbjct: 153 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 209
Query: 512 AESDEHE--QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+D + +G L + +MAPE I + V T + DV+++G+++ E+ S
Sbjct: 210 IMNDSNYIVKGNARLPVK--------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 24/249 (9%)
Query: 366 KIATGSFSE-----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLS 420
KI GSF E +NR Q V D + D+ EI +L + + + +
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 421 GFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
G + + +++ E+ G+ D L + Q I ++ L+YLH
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDET------QIATILREILKGLDYLHSEKK 125
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
+H+++K +N+LL + K+ +FG+A + ++ + VGT +MAPE
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF--------VGTPFWMAPE 174
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRG 600
I+ K D+++ G+ +EL G + + L + E N + L+
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKE 234
Query: 601 FIDPSLRNE 609
F++ L E
Sbjct: 235 FVEACLNKE 243
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 24/249 (9%)
Query: 366 KIATGSFSE-----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLS 420
KI GSF E +NR Q V D + D+ EI +L + + + +
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 421 GFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
G + + +++ E+ G+ D L + Q I ++ L+YLH
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDET------QIATILREILKGLDYLHSEKK 125
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
+H+++K +N+LL + K+ +FG+A + ++ + VGT +MAPE
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--------VGTPFWMAPE 174
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRG 600
I+ K D+++ G+ +EL G + + L + E N + L+
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKE 234
Query: 601 FIDPSLRNE 609
F++ L E
Sbjct: 235 FVEACLNKE 243
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 24/173 (13%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK ++ I++ G G + LV E+ +G L D+L +R + L
Sbjct: 58 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LD 113
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + + + + YL VH++L NIL+++ KI +FGLA+ D+
Sbjct: 114 ASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDK- 169
Query: 518 EQGGYGLQLTRHVVGTYG-----YMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+VV G + APE + + + + + DV++FGVV+ EL +
Sbjct: 170 ---------DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 24/173 (13%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK ++ I++ G G + LV E+ +G L D+L +R + L
Sbjct: 57 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LD 112
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + + + + YL VH++L NIL+++ KI +FGLA+ D+
Sbjct: 113 ASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDK- 168
Query: 518 EQGGYGLQLTRHVVGTYG-----YMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+VV G + APE + + + + + DV++FGVV+ EL +
Sbjct: 169 ---------DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 24/249 (9%)
Query: 366 KIATGSFSE-----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLS 420
KI GSF E +NR Q V D + D+ EI +L + + + +
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 421 GFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
G + + +++ E+ G+ D L + Q I ++ L+YLH
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDET------QIATILREILKGLDYLHSEKK 145
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
+H+++K +N+LL + K+ +FG+A + ++ + VGT +MAPE
Sbjct: 146 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--------VGTPFWMAPE 194
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRG 600
I+ K D+++ G+ +EL G + + L + E N + L+
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKE 254
Query: 601 FIDPSLRNE 609
F++ L E
Sbjct: 255 FVEACLNKE 263
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK ++ I++ G G LV E+ +G L D+L +R + L
Sbjct: 54 DFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR----LD 109
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + + + + YL VH++L NIL+++ KI +FGLA+ D+
Sbjct: 110 ASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 166
Query: 518 EQGGYGLQLTRHVVGTYG-----YMAPEYIENGVITPKLDVFAFGVVVLELLS 565
VV G + APE + + + + + DV++FGVV+ EL +
Sbjct: 167 XX----------VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 24/173 (13%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEG--NTYLVYEFADNGALSDWLHSNRYQTSDNLT 457
D EI ILK ++ I++ G G + LV E+ +G L D+L +R + L
Sbjct: 70 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LD 125
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + + + + YL VH++L NIL+++ KI +FGLA+ D+
Sbjct: 126 ASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDK- 181
Query: 518 EQGGYGLQLTRHVVGTYG-----YMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+VV G + APE + + + + + DV++FGVV+ EL +
Sbjct: 182 ---------DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 33/190 (17%)
Query: 385 GSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444
GS + D A+ +V +EI ILKK+NH II++ F E + Y+V E + G L D
Sbjct: 51 GSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDK 104
Query: 445 LHSNR--YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL---DTNL 499
+ N+ + + L + Y + A+ YLH+ +H++LK N+LL + +
Sbjct: 105 VVGNKRLKEATCKLYF-------YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDC 154
Query: 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY---IENGVITPKLDVFAF 556
KIT+FG H + L R + GT Y+APE + +D ++
Sbjct: 155 LIKITDFG---------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
Query: 557 GVVVLELLSG 566
GV++ LSG
Sbjct: 206 GVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 33/190 (17%)
Query: 385 GSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444
GS + D A+ +V +EI ILKK+NH II++ F E + Y+V E + G L D
Sbjct: 50 GSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDK 103
Query: 445 LHSNRY--QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL---DTNL 499
+ N+ + + L + Y + A+ YLH+ +H++LK N+LL + +
Sbjct: 104 VVGNKRLKEATCKLYF-------YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDC 153
Query: 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY---IENGVITPKLDVFAF 556
KIT+FG H + L R + GT Y+APE + +D ++
Sbjct: 154 LIKITDFG---------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 204
Query: 557 GVVVLELLSG 566
GV++ LSG
Sbjct: 205 GVILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 33/190 (17%)
Query: 385 GSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444
GS + D A+ +V +EI ILKK+NH II++ F E + Y+V E + G L D
Sbjct: 51 GSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDK 104
Query: 445 LHSNRY--QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL---DTNL 499
+ N+ + + L + Y + A+ YLH+ +H++LK N+LL + +
Sbjct: 105 VVGNKRLKEATCKLYF-------YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDC 154
Query: 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY---IENGVITPKLDVFAF 556
KIT+FG H + L R + GT Y+APE + +D ++
Sbjct: 155 LIKITDFG---------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
Query: 557 GVVVLELLSG 566
GV++ LSG
Sbjct: 206 GVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 33/190 (17%)
Query: 385 GSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444
GS + D A+ +V +EI ILKK+NH II++ F E + Y+V E + G L D
Sbjct: 51 GSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDK 104
Query: 445 LHSNRY--QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL---DTNL 499
+ N+ + + L + Y + A+ YLH+ +H++LK N+LL + +
Sbjct: 105 VVGNKRLKEATCKLYF-------YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDC 154
Query: 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY---IENGVITPKLDVFAF 556
KIT+FG H + L R + GT Y+APE + +D ++
Sbjct: 155 LIKITDFG---------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
Query: 557 GVVVLELLSG 566
GV++ LSG
Sbjct: 206 GVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 33/190 (17%)
Query: 385 GSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444
GS + D A+ +V +EI ILKK+NH II++ F E + Y+V E + G L D
Sbjct: 57 GSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDK 110
Query: 445 LHSNRY--QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL---DTNL 499
+ N+ + + L + Y + A+ YLH+ +H++LK N+LL + +
Sbjct: 111 VVGNKRLKEATCKLYF-------YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDC 160
Query: 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY---IENGVITPKLDVFAF 556
KIT+FG H + L R + GT Y+APE + +D ++
Sbjct: 161 LIKITDFG---------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 211
Query: 557 GVVVLELLSG 566
GV++ LSG
Sbjct: 212 GVILFICLSG 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 39/232 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDA--AVKVMKGDV----------SSEINILKKINHS 414
+ GSF G V KG + A+K++K DV E +L ++
Sbjct: 27 LGKGSF-------GKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 415 NIIRLSGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALN 473
+ C + Y V E+ + G L Q Q V A +++ L
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLM-----YHIQQVGKFKEPQAVFYAAEISIGLF 134
Query: 474 YLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT 533
+LHK ++++LK N++LD+ KI +FG+ + EH G TR GT
Sbjct: 135 FLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK-----EHMMDGV---TTREFCGT 183
Query: 534 YGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585
Y+APE I +D +A+GV++ E+L+G+ G+ E L+ SI
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---LFQSI 232
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 56/259 (21%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGN-------------TYLVYEFADNGALSDWLHS 447
+ SE+ +L +NH ++R + N ++ E+ +N L D +HS
Sbjct: 49 ILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHS 108
Query: 448 NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507
+ W+ QI AL+Y+H + +H+NLK NI +D + KI +FG
Sbjct: 109 ENLNQQRDEYWRLFRQIL----EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFG 161
Query: 508 LARSAES-------DEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVV 559
LA++ D G LT +GT Y+A E ++ G K+D ++ G++
Sbjct: 162 LAKNVHRSLDILKLDSQNLPGSSDNLTS-AIGTAXYVATEVLDGTGHYNEKIDXYSLGII 220
Query: 560 VLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMA 619
E + S E N+ +KLR S+ E+P D +
Sbjct: 221 FFEXI------------------YPFSTGXERVNILKKLR-----SVSIEFPPDFDDNKX 257
Query: 620 QLAKNCTA----HDLNARP 634
++ K HD N RP
Sbjct: 258 KVEKKIIRLLIDHDPNKRP 276
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T +VV Y Y APE I +D+++ GV++ E++ G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 23/180 (12%)
Query: 398 KGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLH-SNRYQTSD- 454
K + SE+ I+ + H NI+ L G C H G ++ E+ G L ++L +R +D
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 455 -------NLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507
L+ + + + VA + +L + +H+++ N+LL AKI +FG
Sbjct: 153 AFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFG 209
Query: 508 LARSAESDEHE--QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
LAR +D + +G L + +MAPE I + V T + DV+++G+++ E+ S
Sbjct: 210 LARDIMNDSNYIVKGNARLPVK--------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 38/223 (17%)
Query: 361 KFQDLKIA----TGSFSEENRIQGSVYRGS--FKGDDAAVKV----------MKGDVSSE 404
K +D K+ GSF+ VYR G + A+K+ M V +E
Sbjct: 9 KIEDFKVGNLLGKGSFA-------GVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 405 INILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQI 464
+ I ++ H +I+ L + YLV E NG ++ +L + S+N +
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN----EARHF 117
Query: 465 AYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
+ + + YLH + +H++L SN+LL N+ KI +FGLA + HE+ Y L
Sbjct: 118 MHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKM-PHEK-HYTL 172
Query: 525 QLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
GT Y++PE + DV++ G + LL GR
Sbjct: 173 ------CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 35/240 (14%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
V+ + + ++H++I+RL G C + LV ++ G+L D + +R L
Sbjct: 80 VTDHMLAIGSLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW 138
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
VQIA + YL ++ VH+NL N+LL + + ++ +FG+A D+ +
Sbjct: 139 GVQIA----KGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ-- 189
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEAE 579
L +MA E I G T + DV+++GV V EL++ G E G
Sbjct: 190 ----LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG------- 238
Query: 580 LLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEV 639
R+ E ++ EK P + +D+ M + C D N RP+ E+
Sbjct: 239 ------LRLAEVPDLLEKGERLAQPQICT---IDVYMVMVK----CWMIDENIRPTFKEL 285
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTY-LVYEFADNGALSDWLHSNRYQTSDNLTWK 459
V+ + + ++H++I+RL G C G++ LV ++ G+L D + +R L
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLN 119
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
VQIA + YL ++ VH+NL N+LL + + ++ +FG+A D+ +
Sbjct: 120 WGVQIA----KGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ- 171
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GREAVTGDQNCEA 578
L +MA E I G T + DV+++GV V EL++ G E G
Sbjct: 172 -----LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG------ 220
Query: 579 ELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISE 638
R+ E ++ EK P + +D+ M + C D N RP+ E
Sbjct: 221 -------LRLAEVPDLLEKGERLAQPQICT---IDVYMVMVK----CWMIDENIRPTFKE 266
Query: 639 V 639
+
Sbjct: 267 L 267
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 104
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 162 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T +VV Y Y APE I +D+++ GV++ E++ G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 104
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 162 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 104
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 162 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 104
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 162 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 51 NIKKEIXINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 104
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 162 ------RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 394 VKVMKGDVS---SEINILKKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNR 449
V + K +V+ +E +L+ H + L F H+ + V E+A+ G L L R
Sbjct: 42 VIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRER 100
Query: 450 YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509
T + + ++ +AL YLH + V++++K N++LD + KIT+FGL
Sbjct: 101 VFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Query: 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ SD G + + GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 153 KEGISD-------GATM-KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 104
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 162 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 49 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 102
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 103 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 160 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 394 VKVMKGDVS---SEINILKKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNR 449
V + K +V+ +E +L+ H + L F H+ + V E+A+ G L L R
Sbjct: 47 VIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRER 105
Query: 450 YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509
T + + ++ +AL YLH + V++++K N++LD + KIT+FGL
Sbjct: 106 VFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC 157
Query: 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ SD G + + GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 158 KEGISD-------GATM-KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 394 VKVMKGDVS---SEINILKKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNR 449
V + K +V+ +E +L+ H + L F H+ + V E+A+ G L L R
Sbjct: 42 VIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRER 100
Query: 450 YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509
T + + ++ +AL YLH + V++++K N++LD + KIT+FGL
Sbjct: 101 VFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Query: 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ SD G + + GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 153 KEGISD-------GATM-KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 394 VKVMKGDVS---SEINILKKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNR 449
V + K +V+ +E +L+ H + L F H+ + V E+A+ G L L R
Sbjct: 42 VIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRER 100
Query: 450 YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509
T + + ++ +AL YLH + V++++K N++LD + KIT+FGL
Sbjct: 101 VFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Query: 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ SD G + + GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 153 KEGISD-------GATM-KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 29/188 (15%)
Query: 385 GSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444
GS + D A+ +V +EI ILKK+NH II++ F E + Y+V E + G L D
Sbjct: 176 GSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDK 229
Query: 445 LHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL---DTNLRA 501
+ N+ L Y + A+ YLH+ +H++LK N+LL + +
Sbjct: 230 VVGNK-----RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLI 281
Query: 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY---IENGVITPKLDVFAFGV 558
KIT+FG H + L R + GT Y+APE + +D ++ GV
Sbjct: 282 KITDFG---------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 332
Query: 559 VVLELLSG 566
++ LSG
Sbjct: 333 ILFICLSG 340
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 394 VKVMKGDVS---SEINILKKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNR 449
V + K +V+ +E +L+ H + L F H+ + V E+A+ G L L R
Sbjct: 45 VIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRER 103
Query: 450 YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509
T + + ++ +AL YLH + V++++K N++LD + KIT+FGL
Sbjct: 104 VFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC 155
Query: 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ SD G + + GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 156 KEGISD-------GATM-KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 394 VKVMKGDVS---SEINILKKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNR 449
V + K +V+ +E +L+ H + L F H+ + V E+A+ G L L R
Sbjct: 42 VIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRER 100
Query: 450 YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509
T + + ++ +AL YLH + V++++K N++LD + KIT+FGL
Sbjct: 101 VFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Query: 510 RSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ SD G + + GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 153 KEGISD-------GATM-KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 51 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 104
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 162 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 33/217 (15%)
Query: 382 VYRGSFKGDDAAVKVMKGDVSS----EINIL-KKINHSNIIRLSGFCVHEGNTYLVYEFA 436
V++GSF+G AVK M D EI +L + +H N+IR + Y+ E
Sbjct: 50 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 109
Query: 437 DNGALSDWLHSNRYQTSDNLTWKQR---VQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493
N L D + S + +NL ++ + + +A+ + +LH +H++LK NI
Sbjct: 110 -NLNLQDLVESKNV-SDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNI 164
Query: 494 LLDT-------------NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
L+ T NLR I++FGL + +S Q + L + GT G+ APE
Sbjct: 165 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG---QXXFRXNLN-NPSGTSGWRAPE 220
Query: 541 YIENGV---ITPKLDVFAFGVVVLELLSGREAVTGDQ 574
+E +T +D+F+ G V +LS + GD+
Sbjct: 221 LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 403 SEINILKKINHSNIIRLS-GFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQR 461
+E +L+ H + L F H+ + V E+A+ G L L R T + +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTEERARF--- 109
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
++ +AL YLH + V++++K N++LD + KIT+FGL + SD
Sbjct: 110 --YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------ 158
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
G + + GT Y+APE +E+ +D + GVV+ E++ GR
Sbjct: 159 -GATM-KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 29/188 (15%)
Query: 385 GSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDW 444
GS + D A+ +V +EI ILKK+NH II++ F E + Y+V E + G L D
Sbjct: 190 GSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDK 243
Query: 445 LHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL---DTNLRA 501
+ N+ L Y + A+ YLH+ +H++LK N+LL + +
Sbjct: 244 VVGNK-----RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLI 295
Query: 502 KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY---IENGVITPKLDVFAFGV 558
KIT+FG H + L R + GT Y+APE + +D ++ GV
Sbjct: 296 KITDFG---------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 346
Query: 559 VVLELLSG 566
++ LSG
Sbjct: 347 ILFICLSG 354
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 33/217 (15%)
Query: 382 VYRGSFKGDDAAVKVMKGDVSS----EINIL-KKINHSNIIRLSGFCVHEGNTYLVYEFA 436
V++GSF+G AVK M D EI +L + +H N+IR + Y+ E
Sbjct: 50 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 109
Query: 437 DNGALSDWLHSNRYQTSDNLTWKQR---VQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493
N L D + S + +NL ++ + + +A+ + +LH +H++LK NI
Sbjct: 110 -NLNLQDLVESKNV-SDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNI 164
Query: 494 LLDT-------------NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
L+ T NLR I++FGL + +S Q + L + GT G+ APE
Sbjct: 165 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG---QXXFRXNLN-NPSGTSGWRAPE 220
Query: 541 YIENGV---ITPKLDVFAFGVVVLELLSGREAVTGDQ 574
+E +T +D+F+ G V +LS + GD+
Sbjct: 221 LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 385 GSFKGDDAAVKVMK-----------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433
G+ G A+KV+K +E NIL+++ H I+ L G YL+
Sbjct: 41 GANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL 100
Query: 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493
E+ G L L D + +++ AL +LH+ ++++LK NI
Sbjct: 101 EYLSGGELFMQLEREGIFMEDTACF-----YLAEISMALGHLHQKG---IIYRDLKPENI 152
Query: 494 LLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
+L+ K+T+FGL + + D +T GT YMAPE + +D
Sbjct: 153 MLNHQGHVKLTDFGLCKESIHDG--------TVTHXFCGTIEYMAPEILMRSGHNRAVDW 204
Query: 554 FAFGVVVLELLSGREAVTGD 573
++ G ++ ++L+G TG+
Sbjct: 205 WSLGALMYDMLTGAPPFTGE 224
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 36/177 (20%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHS--------NRYQ 451
V+ E +++ +++H ++L FC + Y +A NG L ++ R+
Sbjct: 84 VTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY 142
Query: 452 TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR- 510
T++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 143 TAE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 186
Query: 511 -SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 187 LSPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTW 458
++ EI I K +NH N+++ G EGN YL E+ G L D R + +
Sbjct: 50 NIKKEICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPE 103
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + + + YLH H+++K N+LLD KI++FGLA + E
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPK-LDVFAFGVVVLELLSG 566
+L + GT Y+APE ++ + +DV++ G+V+ +L+G
Sbjct: 161 ------RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 21/160 (13%)
Query: 426 EGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQI-AYDVANALNYLHKYTNPPYV 484
E +L+ ++ + G L L S R + +++ VQI ++ AL +LHK +
Sbjct: 131 ETKLHLILDYINGGELFTHL-SQRERFTEH-----EVQIYVGEIVLALEHLHKLG---II 181
Query: 485 HKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN 544
++++K NILLD+N +T+FGL++ +DE E+ GT YMAP+ +
Sbjct: 182 YRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA-------YDFCGTIEYMAPDIVRG 234
Query: 545 G--VITPKLDVFAFGVVVLELLSGRE--AVTGDQNCEAEL 580
G +D ++ GV++ ELL+G V G++N +AE+
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI 274
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 389 GDDAAVKVMKGDV----------SSEINILKKI-NHSNIIRLSGFCVHE--GNTYLVYEF 435
GD AVKV+K DV +E IL NH + +L FC + + V EF
Sbjct: 48 GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL--FCCFQTPDRLFFVMEF 105
Query: 436 ADNGALSDWLHSNRYQTSDNLTWKQRVQI-AYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
+ G L H + + D + R + A ++ +AL +LH + ++++LK N+L
Sbjct: 106 VNGGDLM--FHIQKSRRFD----EARARFYAAEIISALMFLH---DKGIIYRDLKLDNVL 156
Query: 495 LDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVF 554
LD K+ +FG+ + +G T GT Y+APE ++ + P +D +
Sbjct: 157 LDHEGHCKLADFGMCK--------EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWW 208
Query: 555 AFGVVVLELLSGR---EAVTGDQNCEAEL 580
A GV++ E+L G EA D EA L
Sbjct: 209 AMGVLLYEMLCGHAPFEAENEDDLFEAIL 237
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ---TSDNLTWKQ 460
E+ ILK H NII + T EF + D + S+ +Q +S LT +
Sbjct: 104 ELKILKHFKHDNIIAIKDIL---RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEH 160
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
Y + L Y+H +H++LK SN+L++ N KI +FG+AR + E
Sbjct: 161 VRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 217
Query: 521 GYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTG 572
+ +T + V T Y APE + + T +D+++ G + E+L+ R+ G
Sbjct: 218 YF---MTEY-VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 266
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVK-VMKGDV--SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K V++G + E+ I++K++H NI+RL
Sbjct: 28 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 138
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E ++ Y
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSYICSRY 187
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 242
Query: 594 VREKLR 599
RE++R
Sbjct: 243 TREQIR 248
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYT 138
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 139 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + + D++A G ++ +L++G
Sbjct: 183 SPESKQARANSF--------VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 385 GSFKGDDAAVKVMK-----------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVY 433
G+ G A+KV+K +E NIL+++ H I+ L G YL+
Sbjct: 41 GANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL 100
Query: 434 EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493
E+ G L L D + +++ AL +LH+ ++++LK NI
Sbjct: 101 EYLSGGELFMQLEREGIFMEDTACF-----YLAEISMALGHLHQKG---IIYRDLKPENI 152
Query: 494 LLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDV 553
+L+ K+T+FGL + + D +T GT YMAPE + +D
Sbjct: 153 MLNHQGHVKLTDFGLCKESIHDG--------TVTHTFCGTIEYMAPEILMRSGHNRAVDW 204
Query: 554 FAFGVVVLELLSGREAVTGD 573
++ G ++ ++L+G TG+
Sbjct: 205 WSLGALMYDMLTGAPPFTGE 224
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVK-VMKGDV--SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K V++G + E+ I++K++H NI+RL
Sbjct: 28 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 138
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E ++ Y
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSYICSRY 187
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 242
Query: 594 VREKLR 599
RE++R
Sbjct: 243 TREQIR 248
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 35/196 (17%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEG-----NTYLVYEFADNGALSDWLHSNRYQTSDN 455
+ EI IL ++ IIRL + + Y+V E AD+ ++T
Sbjct: 72 ILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDL------KKLFKTPIF 125
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES- 514
LT + I Y++ N++H+ +H++LK +N LL+ + K+ +FGLAR+ S
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182
Query: 515 ---------DEHEQGG-----YGLQLTRHVVGTYGYMAPEYI---ENGVITPKLDVFAFG 557
+E+E+ G QLT HVV T Y APE I EN T +D+++ G
Sbjct: 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQEN--YTKSIDIWSTG 239
Query: 558 VVVLELLSGREAVTGD 573
+ ELL+ ++ D
Sbjct: 240 CIFAELLNMLQSHIND 255
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 46/215 (21%)
Query: 380 GSVYRGSFK--GDDAAVKVMKG-------DVS-SEINILKKINHSNIIRLSGFCVHEGNT 429
+V+RG K GD A+KV DV E +LKK+NH NI++L F + E T
Sbjct: 23 ANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--FAIEEETT 80
Query: 430 ----YLVYEFADNGALSDWLH--SNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPY 483
L+ EF G+L L SN Y L + + + DV +N+L +
Sbjct: 81 TRHKVLIMEFCPCGSLYTVLEEPSNAY----GLPESEFLIVLRDVVGGMNHLRENG---I 133
Query: 484 VHKNLKTSNILL----DTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAP 539
VH+N+K NI+ D K+T+FG AR E DE Y GT Y+ P
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY---------GTEEYLHP 184
Query: 540 EYIENGVITPK--------LDVFAFGVVVLELLSG 566
+ E V+ +D+++ GV +G
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 108/227 (47%), Gaps = 37/227 (16%)
Query: 359 LYKFQDL-KIATGSFSEENRIQGSVYRGS-FKGDDAAVKVMKGDVSSE---------INI 407
+ K+Q L K+ G++ G VY+ +G A+K ++ D E I++
Sbjct: 20 MEKYQKLEKVGEGTY-------GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISL 72
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQI-AY 466
LK+++H NI+ L E LV+EF + L L N+ D+ +++I Y
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQDS-----QIKIYLY 126
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
+ + + H++ +H++LK N+L++++ K+ +FGLAR+ G ++
Sbjct: 127 QLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAF--------GIPVRS 175
Query: 527 TRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTG 572
H V T Y AP+ + + +D+++ G + E+++G+ G
Sbjct: 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 23/180 (12%)
Query: 398 KGDVSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLH-SNRYQTSD- 454
K + SE+ I+ + H NI+ L G C H G ++ E+ G L ++L +R +D
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 455 -----NLTWKQR--VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG 507
N T R + + VA + +L + +H+++ N+LL AKI +FG
Sbjct: 153 AFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFG 209
Query: 508 LARSAESDEHE--QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
LAR +D + +G L + +MAPE I + V T + DV+++G+++ E+ S
Sbjct: 210 LARDIMNDSNYIVKGNARLPVK--------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T +VV Y Y APE I +D+++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 130
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 131 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 179
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T +VV Y Y APE I +D+++ G ++ E++ G
Sbjct: 180 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 108/227 (47%), Gaps = 37/227 (16%)
Query: 359 LYKFQDL-KIATGSFSEENRIQGSVYRGS-FKGDDAAVKVMKGDVSSE---------INI 407
+ K+Q L K+ G++ G VY+ +G A+K ++ D E I++
Sbjct: 20 MEKYQKLEKVGEGTY-------GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISL 72
Query: 408 LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQI-AY 466
LK+++H NI+ L E LV+EF + L L N+ D+ +++I Y
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQDS-----QIKIYLY 126
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
+ + + H++ +H++LK N+L++++ K+ +FGLAR+ G ++
Sbjct: 127 QLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAF--------GIPVRS 175
Query: 527 TRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTG 572
H V T Y AP+ + + +D+++ G + E+++G+ G
Sbjct: 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T +VV Y Y APE I +D+++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T +VV Y Y APE I +D+++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 23/188 (12%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQ 463
EI +L++++H NII L H+ N LV++F + L S LT
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD-----LEVIIKDNSLVLTPSHIKA 116
Query: 464 IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYG 523
L YLH++ +H++LK +N+LLD N K+ +FGLA+S S
Sbjct: 117 YMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN------- 166
Query: 524 LQLTRHVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582
+ H V T Y APE + + +D++A G ++ ELL + GD + +
Sbjct: 167 -RAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD----- 220
Query: 583 ASISRVLE 590
++R+ E
Sbjct: 221 -QLTRIFE 227
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T +VV Y Y APE I +D+++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 22/172 (12%)
Query: 401 VSSEINILKKINHSNIIRLSGFC--VHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTW 458
V EI ILKK++H N+++L +E + Y+V+E + G + + T L+
Sbjct: 83 VYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME------VPTLKPLSE 136
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
Q D+ + YLH +H+++K SN+L+ + KI +FG++ + +
Sbjct: 137 DQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD-- 191
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIEN--GVITPK-LDVFAFGVVVLELLSGR 567
L + VGT +MAPE + + + K LDV+A GV + + G+
Sbjct: 192 ------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T +VV Y Y APE I +D+++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 137 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 181 SPESKQARANAF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 93/214 (43%), Gaps = 46/214 (21%)
Query: 381 SVYRGSFK--GDDAAVKVMKG-------DVS-SEINILKKINHSNIIRLSGFCVHEGNT- 429
+V+RG K GD A+KV DV E +LKK+NH NI++L F + E T
Sbjct: 24 NVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--FAIEEETTT 81
Query: 430 ---YLVYEFADNGALSDWLH--SNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYV 484
L+ EF G+L L SN Y L + + + DV +N+L + V
Sbjct: 82 RHKVLIMEFCPCGSLYTVLEEPSNAY----GLPESEFLIVLRDVVGGMNHLRENG---IV 134
Query: 485 HKNLKTSNILL----DTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
H+N+K NI+ D K+T+FG AR E DE Y GT Y+ P+
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY---------GTEEYLHPD 185
Query: 541 YIENGVITPK--------LDVFAFGVVVLELLSG 566
E V+ +D+++ GV +G
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKI------NHSNIIRLS 420
+ G++ E +Q +V R + + + MK V NI K+I NH N+++
Sbjct: 15 LGEGAYGE---VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 421 GFCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT 479
G EGN YL E+ G L D R + + + + + + YLH
Sbjct: 72 GH-RREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 480 NPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAP 539
H+++K N+LLD KI++FGLA + E +L + GT Y+AP
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE------RLLNKMCGTLPYVAP 176
Query: 540 EYIENGVITPK-LDVFAFGVVVLELLSG 566
E ++ + +DV++ G+V+ +L+G
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T VV Y Y APE I +D+++ G ++ E++ G
Sbjct: 179 SFMMTPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ +LK +NH NII L + + EF D + + + +N Q L ++
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIHMELDHERMS 127
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A ++
Sbjct: 128 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN------- 177
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ EL+ G G
Sbjct: 178 -FMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 225
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 57 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 116
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 117 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 160
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 161 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T +VV Y Y APE I +D+++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ---TSDNLTWKQ 460
E+ ILK H NII + T EF + D + S+ +Q +S LT +
Sbjct: 103 ELKILKHFKHDNIIAIKDIL---RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEH 159
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
Y + L Y+H +H++LK SN+L++ N KI +FG+AR + E
Sbjct: 160 VRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 216
Query: 521 GYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGREAVTG 572
+ +T + V T Y APE + + T +D+++ G + E+L+ R+ G
Sbjct: 217 YF---MTEY-VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 37/221 (16%)
Query: 382 VYRGSFKGDDAAVKVMKGDVSS----EINIL-KKINHSNIIRLSGFCVHEGNTYLVYEFA 436
V++GSF+G AVK M D EI +L + +H N+IR + Y+ E
Sbjct: 32 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91
Query: 437 DNGALSDWLHSNRYQTSDNLTWKQR---VQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493
N L D + S + +NL ++ + + +A+ + +LH +H++LK NI
Sbjct: 92 -NLNLQDLVESKNV-SDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNI 146
Query: 494 LLDT-------------NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
L+ T NLR I++FGL + +S Q + L + GT G+ APE
Sbjct: 147 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG---QSSFRTNLN-NPSGTSGWRAPE 202
Query: 541 YIENG-------VITPKLDVFAFGVVVLELLSGREAVTGDQ 574
+E +T +D+F+ G V +LS + GD+
Sbjct: 203 LLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 139
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 140 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 183
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 184 SPESKQARANSF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 56 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 115
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 116 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 159
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 160 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 401 VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
V +E ++ ++ NH ++ L E + V E+ + G L + R ++ +
Sbjct: 56 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF- 114
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
+ +++ ALNYLH+ ++++LK N+LLD+ K+T++G+ + +
Sbjct: 115 ----YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--------E 159
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREA--VTG----- 572
G T GT Y+APE + +D +A GV++ E+++GR + G
Sbjct: 160 GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 219
Query: 573 DQNCEAELLYASISRVLEESNVR 595
DQN E L +V+ E +R
Sbjct: 220 DQNTEDYLF-----QVILEKQIR 237
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 54 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 113
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 114 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 157
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 158 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 55 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 114
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 115 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 158
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 159 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 362 FQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKV----MKGDVSSEINILKKIN-HSNI 416
+D + GSFS + V++ S + AVK+ M+ + EI LK H NI
Sbjct: 14 LKDKPLGEGSFS---ICRKCVHKKSNQA--FAVKIISKRMEANTQKEITALKLCEGHPNI 68
Query: 417 IRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
++L + +T+LV E + G L + + ++ + ++ I + +A++++H
Sbjct: 69 VKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAVSHMH 123
Query: 477 KYTNPPYVHKNLKTSNILL---DTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT 533
+ VH++LK N+L + NL KI +FG AR D Q + T
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--------QPLKTPCFT 172
Query: 534 YGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
Y APE + D+++ GV++ +LSG+
Sbjct: 173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 401 VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
V +E ++ ++ NH ++ L E + V E+ + G L + R ++ +
Sbjct: 52 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF- 110
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
+ +++ ALNYLH+ ++++LK N+LLD+ K+T++G+ + +
Sbjct: 111 ----YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--------E 155
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREA--VTG----- 572
G T GT Y+APE + +D +A GV++ E+++GR + G
Sbjct: 156 GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 215
Query: 573 DQNCEAELLYASISRVLEESNVR 595
DQN E L +V+ E +R
Sbjct: 216 DQNTEDYLF-----QVILEKQIR 233
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 32/245 (13%)
Query: 361 KFQDL-KIATGSFSEENRIQGSVYRGSFK--GDDAAVKVMKGDVSS--------EINILK 409
+F+ L K+ G+++ +VY+G K G A+K +K D EI+++K
Sbjct: 6 QFKQLEKLGNGTYA-------TVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMK 58
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRY-QTSDNLTWKQRVQIAYDV 468
++ H NI+RL E LV+EF DN L ++ S T L + +
Sbjct: 59 ELKHENIVRLYDVIHTENKLTLVFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 469 ANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTR 528
L + H+ +H++LK N+L++ + K+ +FGLAR+ G +
Sbjct: 118 LQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAF--------GIPVNTFS 166
Query: 529 HVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISR 587
V T Y AP+ + + +D+++ G ++ E+++G+ G + E L I
Sbjct: 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMG 226
Query: 588 VLEES 592
ES
Sbjct: 227 TPNES 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 137 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 181 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 139 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 183 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 139
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 140 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 183
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 184 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 401 VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
V +E ++ ++ NH ++ L E + V E+ + G L + R ++ +
Sbjct: 67 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF- 125
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
+ +++ ALNYLH+ ++++LK N+LLD+ K+T++G+ + +
Sbjct: 126 ----YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--------E 170
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREA--VTG----- 572
G T GT Y+APE + +D +A GV++ E+++GR + G
Sbjct: 171 GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 230
Query: 573 DQNCEAELLYASISRVLEESNVR 595
DQN E L +V+ E +R
Sbjct: 231 DQNTEDYLF-----QVILEKQIR 248
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 137 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 181 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 139 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 183 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 82 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 141
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 142 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 185
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 186 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 137 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 181 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 135
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 136 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 179
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 180 SPESKQARANSF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVK-VMKGDV--SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K V++G + E+ I++K++H NI+RL
Sbjct: 28 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 138
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E + Y
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSXICSRY 187
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 242
Query: 594 VREKLR 599
RE++R
Sbjct: 243 TREQIR 248
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 139 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 183 SPESKQARANXF--------VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 401 VSSEINILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
V +E ++ ++ NH ++ L E + V E+ + G L + R ++ +
Sbjct: 99 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF- 157
Query: 460 QRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQ 519
+ +++ ALNYLH+ ++++LK N+LLD+ K+T++G+ + +
Sbjct: 158 ----YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--------E 202
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREA--VTG----- 572
G T GT Y+APE + +D +A GV++ E+++GR + G
Sbjct: 203 GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 262
Query: 573 DQNCEAELLYASISRVLEESNVR 595
DQN E L +V+ E +R
Sbjct: 263 DQNTEDYLF-----QVILEKQIR 280
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 139 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 183 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 28 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 138
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E ++ Y
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSYICSRY 187
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 242
Query: 594 VREKLR 599
RE++R
Sbjct: 243 TREQIR 248
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 37/221 (16%)
Query: 382 VYRGSFKGDDAAVKVMKGDVSS----EINIL-KKINHSNIIRLSGFCVHEGNTYLVYEFA 436
V++GSF+G AVK M D EI +L + +H N+IR + Y+ E
Sbjct: 32 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91
Query: 437 DNGALSDWLHSNRYQTSDNLTWKQR---VQIAYDVANALNYLHKYTNPPYVHKNLKTSNI 493
N L D + S + +NL ++ + + +A+ + +LH +H++LK NI
Sbjct: 92 -NLNLQDLVESKNV-SDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNI 146
Query: 494 LLDT-------------NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
L+ T NLR I++FGL + +S Q + L + GT G+ APE
Sbjct: 147 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG---QXXFRXNLN-NPSGTSGWRAPE 202
Query: 541 YIENG-------VITPKLDVFAFGVVVLELLSGREAVTGDQ 574
+E +T +D+F+ G V +LS + GD+
Sbjct: 203 LLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ +LK +NH NII L + + EF D + + + +N Q L ++
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIHMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A ++
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN------- 179
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+T +VV Y Y APE I +D+++ G ++ EL+ G
Sbjct: 180 -FMMTPYVVTRY-YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 61 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 120
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 121 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 164
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 165 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 139 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 183 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 64 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 174
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E ++ Y
Sbjct: 175 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSYICSRY 223
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 224 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 278
Query: 594 VREKLR 599
RE++R
Sbjct: 279 TREQIR 284
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 66 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 176
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E ++ Y
Sbjct: 177 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSYICSRY 225
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 226 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 280
Query: 594 VREKLR 599
RE++R
Sbjct: 281 TREQIR 286
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 41 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 151
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E ++ Y
Sbjct: 152 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSYICSRY 200
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 201 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 255
Query: 594 VREKLR 599
RE++R
Sbjct: 256 TREQIR 261
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 33 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 143
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E ++ Y
Sbjct: 144 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSYICSRY 192
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 193 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 247
Query: 594 VREKLR 599
RE++R
Sbjct: 248 TREQIR 253
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 62 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 172
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E ++ Y
Sbjct: 173 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSYICSRY 221
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 222 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 276
Query: 594 VREKLR 599
RE++R
Sbjct: 277 TREQIR 282
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 56 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 166
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E ++ Y
Sbjct: 167 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSYICSRY 215
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 216 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 270
Query: 594 VREKLR 599
RE++R
Sbjct: 271 TREQIR 276
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 107 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 217
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E ++ Y
Sbjct: 218 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSYICSRY 266
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 267 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 321
Query: 594 VREKLR 599
RE++R
Sbjct: 322 TREQIR 327
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--------NRYQT 452
V+ E +++ +++H ++L + Y +A NG L ++ R+ T
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 135
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR-- 510
++ + +AL YLH +H++LK NILL+ ++ +IT+FG A+
Sbjct: 136 AE-------------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 179
Query: 511 SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
S ES + + VGT Y++PE + D++A G ++ +L++G
Sbjct: 180 SPESKQARANXF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMS 122
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 123 YLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--------GT 171
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 172 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 167
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 168 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 216
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 217 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 133
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 134 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--- 182
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 183 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
Query: 577 E 577
+
Sbjct: 235 D 235
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 28 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 138
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E + Y
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSXICSRY 187
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 242
Query: 594 VREKLR 599
RE++R
Sbjct: 243 TREQIR 248
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 133
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 134 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--- 182
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 183 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
Query: 577 E 577
+
Sbjct: 235 D 235
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 29 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 139
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E + Y
Sbjct: 140 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSXICSRY 188
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 189 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 243
Query: 594 VREKLR 599
RE++R
Sbjct: 244 TREQIR 249
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 389 GDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN 448
D ++K D +E+ I+ I + + G + Y++YE+ +N ++ +
Sbjct: 78 NDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF-DEY 136
Query: 449 RYQTSDNLTWKQRVQ----IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKIT 504
+ N T +Q I V N+ +Y+H N H+++K SNIL+D N R K++
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI--CHRDVKPSNILMDKNGRVKLS 194
Query: 505 NFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI--ENGVITPKLDVFAFGVVV 560
+FG + D+ +G GTY +M PE+ E+ K+D+++ G+ +
Sbjct: 195 DFGESEYM-VDKKIKGS---------RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 28 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 138
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E + Y
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSXICSRY 187
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 242
Query: 594 VREKLR 599
RE++R
Sbjct: 243 TREQIR 248
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 139
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 140 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--- 188
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 189 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 240
Query: 577 E 577
+
Sbjct: 241 D 241
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 133
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 134 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 182
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 183 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
Query: 577 E 577
+
Sbjct: 235 D 235
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ +L + N I+ G +G + E D G+L L + + +
Sbjct: 109 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRI 163
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +++ V L YL + +H+++K SNIL+++ K+ +FG++
Sbjct: 164 PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------- 214
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
G + VGT YM+PE ++ + + D+++ G+ ++E+ GR +
Sbjct: 215 ---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 271
Query: 577 EAELLYA 583
E EL++
Sbjct: 272 ELELMFG 278
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 130
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 131 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 179
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 180 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
Query: 577 E 577
+
Sbjct: 232 D 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 140
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 141 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 189
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 190 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
Query: 577 E 577
+
Sbjct: 242 D 242
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 140
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 141 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 189
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 190 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
Query: 577 E 577
+
Sbjct: 242 D 242
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 140
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 141 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 189
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 190 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
Query: 577 E 577
+
Sbjct: 242 D 242
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 133
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 134 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 182
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 183 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
Query: 577 E 577
+
Sbjct: 235 D 235
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 139
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 140 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 188
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 189 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 240
Query: 577 E 577
+
Sbjct: 241 D 241
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 127
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 128 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 176
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 177 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 228
Query: 577 E 577
+
Sbjct: 229 D 229
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 28 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 138
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E + Y
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSXICSRY 187
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 242
Query: 594 VREKLR 599
RE++R
Sbjct: 243 TREQIR 248
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 167
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 168 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 216
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 217 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 130
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 131 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 179
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 180 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
Query: 577 E 577
+
Sbjct: 232 D 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 130
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 131 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 179
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 180 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
Query: 577 E 577
+
Sbjct: 232 D 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 134
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 135 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 183
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 184 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
Query: 577 E 577
+
Sbjct: 236 D 236
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 32 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 142
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E + Y
Sbjct: 143 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSXICSRY 191
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 192 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 246
Query: 594 VREKLR 599
RE++R
Sbjct: 247 TREQIR 252
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 125
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 126 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 174
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 175 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 226
Query: 577 E 577
+
Sbjct: 227 D 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 47 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 157
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E + Y
Sbjct: 158 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSXICSRY 206
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 207 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 261
Query: 594 VREKLR 599
RE++R
Sbjct: 262 TREQIR 267
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 135
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 136 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 184
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 185 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
Query: 577 E 577
+
Sbjct: 237 D 237
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 124
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 125 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 173
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 174 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
Query: 577 E 577
+
Sbjct: 226 D 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 125
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 126 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 174
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 175 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 226
Query: 577 E 577
+
Sbjct: 227 D 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 151
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 152 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 200
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 201 EMXGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 252
Query: 577 E 577
+
Sbjct: 253 D 253
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 138
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 139 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 187
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 188 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 239
Query: 577 E 577
+
Sbjct: 240 D 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 124
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 125 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 173
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 174 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
Query: 577 E 577
+
Sbjct: 226 D 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 147
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 148 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 196
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 197 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 248
Query: 577 E 577
+
Sbjct: 249 D 249
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 126
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 127 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 175
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 176 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 227
Query: 577 E 577
+
Sbjct: 228 D 228
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ +L + N I+ G +G + E D G+L L + + L
Sbjct: 57 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEIL 116
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+V IA V L YL + +H+++K SNIL+++ K+ +FG++
Sbjct: 117 G---KVSIA--VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS------- 162
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
G + VGT YMAPE ++ + + D+++ G+ ++EL GR +
Sbjct: 163 ---GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAK 219
Query: 577 EAELLYA 583
E E ++
Sbjct: 220 ELEAIFG 226
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 131 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 179
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 180 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 148
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 149 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 197
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 198 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
Query: 577 E 577
+
Sbjct: 250 D 250
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 148
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 149 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 197
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 198 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
Query: 577 E 577
+
Sbjct: 250 D 250
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 72 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 128
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 129 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 177
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 178 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 226
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 36 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 146
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E + Y
Sbjct: 147 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSXICSRY 195
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 196 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 250
Query: 594 VREKLR 599
RE++R
Sbjct: 251 TREQIR 256
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 179 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 147
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 148 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 196
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 197 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 248
Query: 577 E 577
+
Sbjct: 249 D 249
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 151
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 152 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 200
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 201 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 252
Query: 577 E 577
+
Sbjct: 253 D 253
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 131
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 132 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 180
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+ VV Y Y APE I +D+++ G ++ E++ G
Sbjct: 181 SFMMVPFVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 123
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 124 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 172
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 173 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 131 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 179
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 180 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 62 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 172
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E + Y
Sbjct: 173 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSXICSRY 221
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 222 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 276
Query: 594 VREKLR 599
RE++R
Sbjct: 277 TREQIR 282
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 122
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 123 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 171
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 172 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 134
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 135 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 183
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 184 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
Query: 577 E 577
+
Sbjct: 236 D 236
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 28/176 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 157
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 158 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 206
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
E GY V T Y APE + N + +D+++ G ++ ELL+GR G
Sbjct: 207 EMTGY--------VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPG 254
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 134
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 135 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 183
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 184 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
Query: 577 E 577
+
Sbjct: 236 D 236
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + EF D + + + +N Q L ++
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 123
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 124 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 172
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 173 SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 40 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 150
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E + Y
Sbjct: 151 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSXICSRY 199
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 200 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 254
Query: 594 VREKLR 599
RE++R
Sbjct: 255 TREQIR 260
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E G+ V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMAGF--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF--KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSG 421
I GSF G VY+ G+ A+K + D + E+ I++K++H NI+RL
Sbjct: 40 IGNGSF-------GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 422 FCVHEGNTY------LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL 475
F G LV ++ H +R + + + + + Y + +L Y+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM--YQLFRSLAYI 150
Query: 476 HKYTNPPYVHKNLKTSNILLDTNLRA-KITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H + H+++K N+LLD + K+ +FG A+ E + Y
Sbjct: 151 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VSXICSRY 199
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESN 593
Y APE I T +DV++ G V+ ELL G+ GD + I +VL +
Sbjct: 200 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVL-GTP 254
Query: 594 VREKLR 599
RE++R
Sbjct: 255 TREQIR 260
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E G+ V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMAGF--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 46/248 (18%)
Query: 351 RSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDA--AVKVMKGDV-----SS 403
+ +E L+K + GSF G V+ FK + A+K +K DV
Sbjct: 14 KLKIEDFELHKM----LGKGSF-------GKVFLAEFKKTNQFFAIKALKKDVVLMDDDV 62
Query: 404 EINILKK------INHSNIIRLSGFCVHE--GNTYLVYEFADNGALSDWLHSNRYQTSDN 455
E +++K H + + FC + N + V E+ + G L Q+
Sbjct: 63 ECTMVEKRVLSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLM-----YHIQSCHK 115
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515
+ A ++ L +LH + V+++LK NILLD + KI +FG+ +
Sbjct: 116 FDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK----- 167
Query: 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQN 575
+ G T GT Y+APE + +D ++FGV++ E+L G+ G
Sbjct: 168 ---ENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD- 223
Query: 576 CEAELLYA 583
E EL ++
Sbjct: 224 -EEELFHS 230
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQT-SDNLTWKQRV 462
EI ILK H NII + F + +++ F + + + + ++ ++ S + +
Sbjct: 59 EIKILKHFKHENIITI--FNIQRPDSF--ENFNEVYIIQELMQTDLHRVISTQMLSDDHI 114
Query: 463 Q-IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR---SAESDEHE 518
Q Y A+ LH +H++LK SN+L+++N K+ +FGLAR + +D E
Sbjct: 115 QYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 519 QGGYGLQLTRHVVGTYGYMAPE-YIENGVITPKLDVFAFGVVVLELLSGREAVTG-DQNC 576
G +T + V T Y APE + + + +DV++ G ++ EL R G D
Sbjct: 172 PTGQQSGMTEY-VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 577 EAELLYASIS--------RVLEESNVREKLRGF 601
+ L++ I R +E RE ++
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSL 263
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 130
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 131 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD--- 179
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 180 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
Query: 577 E 577
+
Sbjct: 232 D 232
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 124
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 125 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 173
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E G+ V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 174 EMAGF--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
Query: 577 E 577
+
Sbjct: 226 D 226
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 134
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 135 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD--- 183
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 184 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
Query: 577 E 577
+
Sbjct: 236 D 236
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 38/191 (19%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEG-----NTYLVYEFADNGALSDWLHSNRYQTSDN 455
+ EI IL ++ IIRL + E Y+V E AD+ ++T
Sbjct: 74 ILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDL------KKLFKTPIF 127
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515
LT + I Y++ ++H+ +H++LK +N LL+ + KI +FGLAR+ SD
Sbjct: 128 LTEQHVKTILYNLLLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSD 184
Query: 516 EH------------------EQGGYGLQLTRHVVGTYGYMAPEYI---ENGVITPKLDVF 554
+ QLT HVV T Y APE I EN T +D++
Sbjct: 185 KDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQEN--YTNSIDIW 241
Query: 555 AFGVVVLELLS 565
+ G + ELL+
Sbjct: 242 STGCIFAELLN 252
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI FGLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 46/248 (18%)
Query: 351 RSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDA--AVKVMKGDV-----SS 403
+ +E L+K + GSF G V+ FK + A+K +K DV
Sbjct: 13 KLKIEDFILHKM----LGKGSF-------GKVFLAEFKKTNQFFAIKALKKDVVLMDDDV 61
Query: 404 EINILKK------INHSNIIRLSGFCVHE--GNTYLVYEFADNGALSDWLHSNRYQTSDN 455
E +++K H + + FC + N + V E+ + G L Q+
Sbjct: 62 ECTMVEKRVLSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLM-----YHIQSCHK 114
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515
+ A ++ L +LH + V+++LK NILLD + KI +FG+ +
Sbjct: 115 FDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK----- 166
Query: 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQN 575
+ G T GT Y+APE + +D ++FGV++ E+L G+ G
Sbjct: 167 ---ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD- 222
Query: 576 CEAELLYA 583
E EL ++
Sbjct: 223 -EEELFHS 229
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 134
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 135 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 183
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 184 SFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 232
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
+E IL+K+N ++ L+ + LV + G L ++ + + V
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY---HMGQAGFPEARAV 289
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
A ++ L LH+ V+++LK NILLD + +I++ GLA
Sbjct: 290 FYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG------- 339
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
Q + VGT GYMAPE ++N T D +A G ++ E+++G+
Sbjct: 340 --QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 37/219 (16%)
Query: 362 FQDLK-IATGSFSEENRIQGSVYRGSFKGDDA--AVKVMKGD----------VSSEINIL 408
F LK I GSF G V K ++ AVKV++ + SE N+L
Sbjct: 40 FHFLKVIGKGSF-------GKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL 92
Query: 409 -KKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
K + H ++ L Y V ++ + G L + H R + L + R A +
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCF--LEPRARFYAA-E 147
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLT 527
+A+AL YLH V+++LK NILLD+ +T+FGL + E+ EH T
Sbjct: 148 IASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNST------T 196
Query: 528 RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
GT Y+APE + +D + G V+ E+L G
Sbjct: 197 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 124/285 (43%), Gaps = 58/285 (20%)
Query: 380 GSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNIIRLSGFCVHEGNTY 430
G +++G ++G+D VKV+K D + E L+ +H N++ + G C +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 431 --LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKN- 487
L+ + G+L + LH D Q V+ A D+A + +LH T P + ++
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQ---SQAVKFALDMARGMAFLH--TLEPLIPRHA 138
Query: 488 LKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI 547
L + ++++D ++ A+I+ + S +S + ++APE ++
Sbjct: 139 LNSRSVMIDEDMTARISMADVKFSFQSPGR-------------MYAPAWVAPEALQK--- 182
Query: 548 TPK------LDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
P+ D+++F V++ EL++ E+ +A +S + E ++ L G
Sbjct: 183 KPEDTNRRSADMWSFAVLLWELVT------------REVPFADLSNM--EIGMKVALEG- 227
Query: 602 IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSKI 646
LR P ++ +++L K C D RP + L K+
Sbjct: 228 ----LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 135
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR
Sbjct: 136 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD--- 184
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 185 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
Query: 577 E 577
+
Sbjct: 237 D 237
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 135
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR
Sbjct: 136 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD--- 184
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 185 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
Query: 577 E 577
+
Sbjct: 237 D 237
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 135
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR
Sbjct: 136 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD--- 184
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 185 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
Query: 577 E 577
+
Sbjct: 237 D 237
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
+E IL+K+N ++ L+ + LV + G L ++ + + V
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY---HMGQAGFPEARAV 289
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
A ++ L LH+ V+++LK NILLD + +I++ GLA
Sbjct: 290 FYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG------- 339
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582
Q + VGT GYMAPE ++N T D +A G ++ E+++G+ Q + ++
Sbjct: 340 --QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF---QQRKKKIKR 394
Query: 583 ASISRVLEE 591
+ R+++E
Sbjct: 395 EEVERLVKE 403
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 123
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 124 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 172
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+T +VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 173 SFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 221
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + T D++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQ 124
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +
Sbjct: 125 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 173
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 174 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
Query: 577 E 577
+
Sbjct: 226 D 226
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ +L + N I+ G +G + E D G+L L + + +
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRI 101
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +++ V L YL + +H+++K SNIL+++ K+ +FG++
Sbjct: 102 PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------- 152
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
G + VGT YM+PE ++ + + D+++ G+ ++E+ GR +
Sbjct: 153 ---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
Query: 577 EAELLYA 583
E EL++
Sbjct: 210 ELELMFG 216
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ +L + N I+ G +G + E D G+L L + + +
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRI 101
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +++ V L YL + +H+++K SNIL+++ K+ +FG++
Sbjct: 102 PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------- 152
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
G + VGT YM+PE ++ + + D+++ G+ ++E+ GR +
Sbjct: 153 ---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
Query: 577 EAELLYA 583
E EL++
Sbjct: 210 ELELMFG 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + ++ T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGL R +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQT-SDNLTWKQRV 462
EI ILK H NII + F + +++ F + + + + ++ ++ S + +
Sbjct: 59 EIKILKHFKHENIITI--FNIQRPDSF--ENFNEVYIIQELMQTDLHRVISTQMLSDDHI 114
Query: 463 Q-IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR---SAESDEHE 518
Q Y A+ LH +H++LK SN+L+++N K+ +FGLAR + +D E
Sbjct: 115 QYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 519 QGGYGLQLTRHVVGTYGYMAPE-YIENGVITPKLDVFAFGVVVLELLSGREAVTG-DQNC 576
G +T V T Y APE + + + +DV++ G ++ EL R G D
Sbjct: 172 PTGQQSGMTE-XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 577 EAELLYASIS--------RVLEESNVREKLRGF 601
+ L++ I R +E RE ++
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSL 263
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+A G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+++D K+T+FGLA+ + T +
Sbjct: 160 LDL---------IYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ +L + N I+ G +G + E D G+L L + + +
Sbjct: 74 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRI 128
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +++ V L YL + +H+++K SNIL+++ K+ +FG++
Sbjct: 129 PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------- 179
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
G + VGT YM+PE ++ + + D+++ G+ ++E+ GR +
Sbjct: 180 ---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 236
Query: 577 EAELLYA 583
E EL++
Sbjct: 237 ELELMFG 243
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 32/189 (16%)
Query: 398 KGDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR------- 449
K + SE+ I+ + H NI+ L G C H G ++ E+ G L ++L
Sbjct: 78 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPS 137
Query: 450 -----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498
+ L + + + VA + +L + +H+++ N+LL
Sbjct: 138 LAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNG 194
Query: 499 LRAKITNFGLARSAESDEH--EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAF 556
AKI +FGLAR +D + +G L + +MAPE I + V T + DV+++
Sbjct: 195 HVAKIGDFGLARDIMNDSNYIVKGNARLPVK--------WMAPESIFDCVYTVQSDVWSY 246
Query: 557 GVVVLELLS 565
G+++ E+ S
Sbjct: 247 GILLWEIFS 255
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 36/185 (19%)
Query: 404 EINILKKINHSNII-RLSGFCVHEG-----NTYLVYEF--ADNGAL--SDWLHSNRYQTS 453
E+ +LK + H N+I L F E + YLV F D G L + L +R Q
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF- 132
Query: 454 DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513
+ Y + L Y+H +H++LK N+ ++ + KI +FGLAR A+
Sbjct: 133 ----------LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQAD 179
Query: 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
S E G V T Y APE I N + T +D+++ G ++ E+++G+ G
Sbjct: 180 S---EMXG--------XVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228
Query: 573 DQNCE 577
+ +
Sbjct: 229 SDHLD 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ +L + N I+ G +G + E D G+L L + + +
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRI 101
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +++ V L YL + +H+++K SNIL+++ K+ +FG++
Sbjct: 102 PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------- 152
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
G + VGT YM+PE ++ + + D+++ G+ ++E+ GR +
Sbjct: 153 ---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
Query: 577 EAELLYA 583
E EL++
Sbjct: 210 ELELMFG 216
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ +L + N I+ G +G + E D G+L L + + +
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRI 101
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +++ V L YL + +H+++K SNIL+++ K+ +FG++
Sbjct: 102 PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------- 152
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
G + VGT YM+PE ++ + + D+++ G+ ++E+ GR +
Sbjct: 153 ---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
Query: 577 EAELLYA 583
E EL++
Sbjct: 210 ELELMFG 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF +++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+A G + L R+ + ++ + ++ ++
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+++D K+T+FG A+ + T +
Sbjct: 161 LDL---------IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----------TWXLC 200
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI ++GLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQ 463
E IL K++ I+ L+ + + LV + G + +++ DN +++
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV---DEDNPGFQEPRA 291
Query: 464 IAY--DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
I Y + + L +LH+ ++++LK N+LLD + +I++ GLA ++ + + G
Sbjct: 292 IFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
Y GT G+MAPE + +D FA GV + E+++ R
Sbjct: 349 Y--------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQT----SDNLTWK 459
E IL K++ I+ L+ + + LV + G + RY DN ++
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDI-------RYHIYNVDEDNPGFQ 287
Query: 460 QRVQIAY--DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ I Y + + L +LH+ ++++LK N+LLD + +I++ GLA ++ +
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ GY GT G+MAPE + +D FA GV + E+++ R
Sbjct: 345 KTKGY--------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQT----SDNLTWK 459
E IL K++ I+ L+ + + LV + G + RY DN ++
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDI-------RYHIYNVDEDNPGFQ 287
Query: 460 QRVQIAY--DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ I Y + + L +LH+ ++++LK N+LLD + +I++ GLA ++ +
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ GY GT G+MAPE + +D FA GV + E+++ R
Sbjct: 345 KTKGY--------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM---KGDVSSEINILKKI-NHSNIIRLSGF 422
I GS+SE R V++ + + AVKV+ K D S EI IL + H NII L
Sbjct: 35 IGVGSYSECKR---CVHKAT--NMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 423 CVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPP 482
+ YLV E G L D + ++ + ++ + + + + YLH +
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLH---SQG 141
Query: 483 YVHKNLKTSNIL-LDTNLRA---KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMA 538
VH++LK SNIL +D + +I +FG A+ ++ GL +T T ++A
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN------GLLMTP--CYTANFVA 193
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLSG 566
PE ++ D+++ G+++ +L+G
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQT----SDNLTWK 459
E IL K++ I+ L+ + + LV + G + RY DN ++
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDI-------RYHIYNVDEDNPGFQ 287
Query: 460 QRVQIAY--DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ I Y + + L +LH+ ++++LK N+LLD + +I++ GLA ++ +
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
+ GY GT G+MAPE + +D FA GV + E+++ R
Sbjct: 345 KTKGY--------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 404 EINILKKINHSNIIRL--------------SGFCVHEGNTYLVYEFADNGALSDWLHSNR 449
EI I+++++H NI+++ G + Y+V E+ + +N
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDL------ANV 111
Query: 450 YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDT-NLRAKITNFGL 508
+ L R+ Y + L Y+H +H++LK +N+ ++T +L KI +FGL
Sbjct: 112 LEQGPLLEEHARL-FMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGL 167
Query: 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSGR 567
AR + +G L+ +V T Y +P + + T +D++A G + E+L+G+
Sbjct: 168 ARIMDPHYSHKG----HLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
Query: 568 EAVTGDQNCE-AELLYASISRVLEESNVREKLRGFIDPSLRNE 609
G E +L+ SI V EE R++L I +RN+
Sbjct: 223 TLFAGAHELEQMQLILESIPVVHEED--RQELLSVIPVYIRND 263
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
D+ E +I + H +I+ L +G Y+V+EF D +D + +
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG---ADLCFEIVKRADAGFVYS 128
Query: 460 QRVQIAY--DVANALNYLHKYTNPPYVHKNLKTSNILL---DTNLRAKITNFGLARSAES 514
+ V Y + AL Y H + +H+++K N+LL + + K+ +FG+A
Sbjct: 129 EAVASHYMRQILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE 185
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
GG VGT +MAPE ++ +DV+ GV++ LLSG
Sbjct: 186 SGLVAGGR--------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 399 GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTW 458
G E+++LK++ H NII L H +L++E+A+N L ++ N +++
Sbjct: 78 GTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEND-LKKYMDKN-----PDVSM 131
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA-----KITNFGLARSAE 513
+ Y + N +N+ H +H++LK N+LL + + KI +FGLAR+
Sbjct: 132 RVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF- 187
Query: 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
G ++ H + T Y PE + + +D+++ + E+L G
Sbjct: 188 -------GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG 240
Query: 573 DQNCE 577
D +
Sbjct: 241 DSEID 245
>pdb|4EBY|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
pdb|4EBZ|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
Length = 212
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 107 VLIPVNCSCSGGGDGDYYQFNTTYTIQNHVETYLSVANNTYQGLTTCQAMMSQNPVDSRN 166
VL+P C C GD+ N +Y+++ +TY VA + Y LTT +++ ++NP + N
Sbjct: 61 VLVPFPCECQ---PGDFLGHNFSYSVRQE-DTYERVAISNYANLTTMESLQARNPFPATN 116
Query: 167 LTVGLDLFVPLRCACPSRDQAASGFNHLLTYMVTWGDSISAIAQ 210
+ + L V + C+C + + F +TY + DS+S+IA+
Sbjct: 117 IPLSATLNVLVNCSC-GDESVSKDFGLFVTYPLRPEDSLSSIAR 159
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 28/220 (12%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVM------KGDVSSEINILKKINHSNIIRL 419
++ TG+F +R+ +F AA VM K V EI + + H ++ L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNF----AAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 219
Query: 420 SGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT 479
+ ++YEF G L + + + S++ + V+ V L ++H+
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED----EAVEYMRQVCKGLCHMHENN 275
Query: 480 NPPYVHKNLKTSNILLDTNL--RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYM 537
YVH +LK NI+ T K+ +FGL + Q + GT +
Sbjct: 276 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK---------QSVKVTTGTAEFA 323
Query: 538 APEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
APE E + D+++ GV+ LLSG G+ + E
Sbjct: 324 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +D+
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
G V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 179 MTG---------XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+A G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+++D K+T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM---KGDVSSEINILKKI-NHSNIIRLSGF 422
I GS+SE R V++ + + AVKV+ K D S EI IL + H NII L
Sbjct: 35 IGVGSYSECKR---CVHKAT--NMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 423 CVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPP 482
+ YLV E G L D + ++ + ++ + + + + YLH +
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLH---SQG 141
Query: 483 YVHKNLKTSNIL-LDTNLRA---KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMA 538
VH++LK SNIL +D + +I +FG A+ ++ GL +T T ++A
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN------GLLMTP--CYTANFVA 193
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLSG 566
PE ++ D+++ G+++ +L+G
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+A G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+++D K+T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 35/243 (14%)
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
+++ K++H +++ G CV LV EF G+L +L N+ N+ WK +++A
Sbjct: 64 SMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK--NCINILWK--LEVA 119
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A A+++L + T +H N+ NILL K N + ++ G
Sbjct: 120 KQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDP-----GISITV 171
Query: 526 LTRHVVGT-YGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583
L + ++ ++ PE IEN + D ++FG + E+ SG GD
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG-----GD---------- 216
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
+ L + + KL+ + D R++ P A +A L NC ++ + RPS + L
Sbjct: 217 ---KPLSALDSQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
Query: 644 SKI 646
+ +
Sbjct: 271 NSL 273
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 28/195 (14%)
Query: 389 GDDAAVKVMKGDVSSEIN---------ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNG 439
G+ A+K + SEI +LK + H N+I L + Y+F
Sbjct: 67 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY--- 123
Query: 440 ALSDWLHSNRYQTSDNLTWKQRVQ-IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498
+ ++ ++ + ++++Q + Y + L Y+H + VH++LK N+ ++ +
Sbjct: 124 LVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNED 180
Query: 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFG 557
KI +FGLAR A++ E GY V T Y APE I + + +D+++ G
Sbjct: 181 CELKILDFGLARHADA---EMTGY--------VVTRWYRAPEVILSWMHYNQTVDIWSVG 229
Query: 558 VVVLELLSGREAVTG 572
++ E+L+G+ G
Sbjct: 230 CIMAEMLTGKTLFKG 244
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 148
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +FGLAR +D+
Sbjct: 149 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 198
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
G V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 199 MXG---------XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
Query: 577 E 577
+
Sbjct: 250 D 250
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
+V E+ I++ + H ++ L E + ++V + G L RY N+ +K
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDL-------RYHLQQNVHFK 113
Query: 460 QRVQIAY--DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + ++ AL+YL N +H+++K NILLD + IT+F +A +
Sbjct: 114 EETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-- 168
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSGR 567
Q+T + GT YMAPE + + +D ++ GV ELL GR
Sbjct: 169 ------TQITT-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 28/220 (12%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVM------KGDVSSEINILKKINHSNIIRL 419
++ TG+F +R+ +F AA VM K V EI + + H ++ L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNF----AAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 113
Query: 420 SGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT 479
+ ++YEF G L + + + S++ + V+ V L ++H+
Sbjct: 114 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED----EAVEYMRQVCKGLCHMHENN 169
Query: 480 NPPYVHKNLKTSNILLDTNL--RAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYM 537
YVH +LK NI+ T K+ +FGL + Q + GT +
Sbjct: 170 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK---------QSVKVTTGTAEFA 217
Query: 538 APEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
APE E + D+++ GV+ LLSG G+ + E
Sbjct: 218 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 257
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+A G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+++D ++T+FGLA+ + T +
Sbjct: 160 LDL---------IYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLH---SNRYQTSDNL 456
++ EI + + +H NI+ V + +LV + G++ D + + S L
Sbjct: 54 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 113
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
I +V L YLHK +H+++K NILL + +I +FG++ +
Sbjct: 114 DESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLAT-- 168
Query: 517 HEQGGYGLQLTRH-----VVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSG 566
G +TR+ VGT +MAPE +E K D+++FG+ +EL +G
Sbjct: 169 ------GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQT-SDNLTWKQRV 462
EI ILK H NII + F + +++ F + + + + ++ ++ S + +
Sbjct: 59 EIKILKHFKHENIITI--FNIQRPDSF--ENFNEVYIIQELMQTDLHRVISTQMLSDDHI 114
Query: 463 Q-IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR---SAESDEHE 518
Q Y A+ LH +H++LK SN+L+++N K+ +FGLAR + +D E
Sbjct: 115 QYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 519 QGGYGLQLTRHVVGTYGYMAPE-YIENGVITPKLDVFAFGVVVLELLSGREAVTG-DQNC 576
G + V T Y APE + + + +DV++ G ++ EL R G D
Sbjct: 172 PTGQQSGMVE-FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 577 EAELLYASIS--------RVLEESNVREKLRGF 601
+ L++ I R +E RE ++
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSL 263
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 28/195 (14%)
Query: 389 GDDAAVKVMKGDVSSEIN---------ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNG 439
G+ A+K + SEI +LK + H N+I L + Y+F
Sbjct: 49 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY--- 105
Query: 440 ALSDWLHSNRYQTSDNLTWKQRVQ-IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN 498
+ ++ ++ + ++++Q + Y + L Y+H + VH++LK N+ ++ +
Sbjct: 106 LVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNED 162
Query: 499 LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFG 557
KI +FGLAR A++ E GY V T Y APE I + + +D+++ G
Sbjct: 163 CELKILDFGLARHADA---EMTGY--------VVTRWYRAPEVILSWMHYNQTVDIWSVG 211
Query: 558 VVVLELLSGREAVTG 572
++ E+L+G+ G
Sbjct: 212 CIMAEMLTGKTLFKG 226
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLH---SNRYQTSDNL 456
++ EI + + +H NI+ V + +LV + G++ D + + S L
Sbjct: 59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 118
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
I +V L YLHK +H+++K NILL + +I +FG++ +
Sbjct: 119 DESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLAT-- 173
Query: 517 HEQGGYGLQLTRH-----VVGTYGYMAPEYIEN-GVITPKLDVFAFGVVVLELLSG 566
G +TR+ VGT +MAPE +E K D+++FG+ +EL +G
Sbjct: 174 ------GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+ VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 179 SFMMEPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPG 227
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 39/232 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDA--AVKVMKGDVS-SEINILKKINHSNIIRLSG-- 421
+ GSF G V KG D AVK++K DV + ++ + ++ L G
Sbjct: 349 LGKGSF-------GKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 422 -------FCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALN 473
C + Y V E+ + G L Q V A ++A L
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLM-----YHIQQVGRFKEPHAVFYAAEIAIGLF 456
Query: 474 YLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT 533
+L + ++++LK N++LD+ KI +FG+ + D G+ T+ GT
Sbjct: 457 FLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-------GV-TTKXFCGT 505
Query: 534 YGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585
Y+APE I +D +AFGV++ E+L+G+ G+ E L+ SI
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQSI 554
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 44/195 (22%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEG-----NTYLVYEFADNGALSDWLHSNRYQTSDN 455
+ EI IL ++NH +++++ + + Y+V E AD SD+ ++T
Sbjct: 99 ILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD----SDF--KKLFRTPVY 152
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515
LT + Y++ + Y+H + +H++LK +N L++ + K+ +FGLAR+ D
Sbjct: 153 LTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV--D 207
Query: 516 EHEQGGYGL----------------------QLTRHVVGTYGYMAPEYI---ENGVITPK 550
E G L QLT HVV T Y APE I EN T
Sbjct: 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVV-TRWYRAPELILLQEN--YTEA 264
Query: 551 LDVFAFGVVVLELLS 565
+DV++ G + ELL+
Sbjct: 265 IDVWSIGCIFAELLN 279
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS--NRYQTSDNLTWKQR 461
E+ +LK + H N+I L + + +F++ ++ + + N S L+ +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATS---IEDFSEVYLVTTLMGADLNNIVKSQALSDEHV 133
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
+ Y + L Y+H + +H++LK SN+ ++ + +I +FGLAR A+ E G
Sbjct: 134 QFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE---EMTG 187
Query: 522 YGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
Y V T Y APE + N + +D+++ G ++ ELL G+ G
Sbjct: 188 Y--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ EI + K + H NI++ G G + E G+LS L S DN +Q
Sbjct: 66 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN---EQ 122
Query: 461 RVQI-AYDVANALNYLHKYTNPPYVHKNLKTSNILLDT-NLRAKITNFGLARSAESDEHE 518
+ + L YLH + VH+++K N+L++T + KI++FG ++
Sbjct: 123 TIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA----- 174
Query: 519 QGGYGLQ-LTRHVVGTYGYMAPEYIENGV--ITPKLDVFAFGVVVLELLSGR 567
G+ T GT YMAPE I+ G D+++ G ++E+ +G+
Sbjct: 175 ----GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF +++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 153 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 192
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 235
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI + GLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI +F LAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-NLTWKQRV 462
E+ ++K +NH NII L + + + EF D + + + +N Q L ++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ Y + + +LH + +H++LK SNI++ ++ KI +FGLAR+A G
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GT 178
Query: 523 GLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTG 572
+ VV Y Y APE I +D+++ G ++ E++ + G
Sbjct: 179 SFMMEPEVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 227
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF +++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 153 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 192
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 235
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ +L + N I+ G +G + E D G+L L + + +
Sbjct: 50 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRI 104
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +++ V L YL + +H+++K SNIL+++ K+ +FG++
Sbjct: 105 PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------- 155
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
G ++ VGT YM+PE ++ + + D+++ G+ ++E+ GR
Sbjct: 156 ---GQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI + GLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDA--AVKVMKGDVSSEINILK-KINHSNIIRLSG-- 421
+ GSF G V KG D AVK++K DV + + ++ + ++ L G
Sbjct: 28 LGKGSF-------GKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 422 -------FCVHEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALN 473
C + Y V E+ + G L Q V A ++A L
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLM-----YHIQQVGRFKEPHAVFYAAEIAIGLF 135
Query: 474 YLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT 533
+L + ++++LK N++LD+ KI +FG+ + D G+ T+ GT
Sbjct: 136 FLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-------GVT-TKXFCGT 184
Query: 534 YGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASI 585
Y+APE I +D +AFGV++ E+L+G+ G+ E L+ SI
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQSI 233
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+A G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+++D ++T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF +++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 161 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 200
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF +++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 161 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 200
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF +++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 181 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 220
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 263
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 359 LYKFQDL-KIATGS----FSEENRIQGSVY---RGSFKGDDAAVKVMKGDVSSEINILKK 410
+ K++ L KI G+ F +NR + R DD V EI +LK+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKE 57
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
+ H NI+RL + LV+EF D L + S + +L + + +
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQD-LKKYFDS----CNGDLDPEIVKSFLFQLLK 112
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHV 530
L + H +H++LK N+L++ N K+ NFGLAR+ G ++
Sbjct: 113 GLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAF--------GIPVRCYSAE 161
Query: 531 VGTYGYMAPEYIENGVI-TPKLDVFAFGVVVLELL-SGREAVTGD 573
V T Y P+ + + + +D+++ G + EL +GR G+
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF +++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 161 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 200
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 404 EINILKKINHSNIIRL-----SGFCVHEGN-TYLVYEFADNGALSDWLHSNRYQTSDNLT 457
E+ +LK + H N+I L + E N YLV GA + + + T D++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ + Y + L Y+H + +H++LK SN+ ++ + KI + GLAR +
Sbjct: 129 F-----LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD--- 177
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
E GY V T Y APE + N + +D+++ G ++ ELL+GR G +
Sbjct: 178 EMTGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 577 E 577
+
Sbjct: 230 D 230
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+ +L N Y+V E+A G + L R+ + ++ + ++ ++
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+++D K+T+FG A+ + T +
Sbjct: 161 LDL---------IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----------TWXLC 200
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+ +L N Y+V E+A G + L R+ + ++ + ++ ++
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+++D K+T+FG A+ + T +
Sbjct: 161 LDL---------IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----------TWXLC 200
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+ +L N Y+V E+A G + L R+ + ++ + ++ ++
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+++D K+T+FG A+ + T +
Sbjct: 161 LDL---------IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----------TWXLC 200
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ EI + K + H NI++ G G + E G+LS L S DN +Q
Sbjct: 52 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN---EQ 108
Query: 461 RVQI-AYDVANALNYLHKYTNPPYVHKNLKTSNILLDT-NLRAKITNFGLARSAESDEHE 518
+ + L YLH + VH+++K N+L++T + KI++FG ++
Sbjct: 109 TIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA----- 160
Query: 519 QGGYGLQ-LTRHVVGTYGYMAPEYIENGV--ITPKLDVFAFGVVVLELLSGR 567
G+ T GT YMAPE I+ G D+++ G ++E+ +G+
Sbjct: 161 ----GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 464 IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYG 523
+ Y + L Y+H + +H++LK SN+ ++ + +I +FGLAR A+ E GY
Sbjct: 128 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE---EMTGY- 180
Query: 524 LQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
V T Y APE + N + +D+++ G ++ ELL G+ G
Sbjct: 181 -------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 223
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K I TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D K+ +FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 465 AYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
A ++ L ++H N V+++LK +NILLD + +I++ GLA +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----------CDFSK 344
Query: 525 QLTRHVVGTYGYMAPEYIENGVI-TPKLDVFAFGVVVLELLSG----REAVTGDQN 575
+ VGT+GYMAPE ++ GV D F+ G ++ +LL G R+ T D++
Sbjct: 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 400
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 465 AYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
A ++ L ++H N V+++LK +NILLD + +I++ GLA +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----------CDFSK 344
Query: 525 QLTRHVVGTYGYMAPEYIENGVI-TPKLDVFAFGVVVLELLSG----REAVTGDQN 575
+ VGT+GYMAPE ++ GV D F+ G ++ +LL G R+ T D++
Sbjct: 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 400
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVM------KGDVSSEINILKKINHSNIIRL 419
K+ G FS + ++G ++ G F A +++ + + E ++ + NH NI+RL
Sbjct: 36 KLGEGGFSYVDLVEG-LHDGHFY---ALKRILCHEQQDREEAQREADMHRLFNHPNILRL 91
Query: 420 SGFCVHE----GNTYLVYEFADNGALSDWLHSNRYQTSDN-LTWKQRVQIAYDVANALNY 474
+C+ E +L+ F G L W R + N LT Q + + + L
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTL--WNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 475 LHKYTNPPYVHKNLKTSNILLDTNLRAKITNFG-LARSAESDEHEQGGYGLQLTRHVVGT 533
+H Y H++LK +NILL + + + G + ++ E + LQ T
Sbjct: 150 IHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 534 YGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSG 566
Y APE + VI + DV++ G V+ ++ G
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 465 AYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
A ++ L ++H N V+++LK +NILLD + +I++ GLA +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----------CDFSK 344
Query: 525 QLTRHVVGTYGYMAPEYIENGVI-TPKLDVFAFGVVVLELLSG----REAVTGDQN 575
+ VGT+GYMAPE ++ GV D F+ G ++ +LL G R+ T D++
Sbjct: 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 400
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 17/171 (9%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ +L + N I+ G +G + E D G+L L + + +
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRI 101
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +++ V L YL + +H+++K SNIL+++ K+ +FG++
Sbjct: 102 PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------- 152
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
G + VGT YM+PE ++ + + D+++ G+ ++E+ GR
Sbjct: 153 ---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 465 AYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGL 524
A ++ L ++H N V+++LK +NILLD + +I++ GLA +
Sbjct: 297 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----------CDFSK 343
Query: 525 QLTRHVVGTYGYMAPEYIENGVI-TPKLDVFAFGVVVLELLSG----REAVTGDQN 575
+ VGT+GYMAPE ++ GV D F+ G ++ +LL G R+ T D++
Sbjct: 344 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 399
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 149
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 150 ---IYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 195
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 196 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 229
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 408 LKKINHSNIIRLSGFCV-----HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
L+ H N++RL C E LV+E D L+ +L T K
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKD-- 124
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ + + L++LH + VH++LK NIL+ ++ + K+ +FGLAR Y
Sbjct: 125 -MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI----------Y 170
Query: 523 GLQLT-RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
Q+ VV T Y APE + +D+++ G + E+ + G + +
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD 226
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLAGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL------ 157
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 158 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 203
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 204 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 146 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWTLC 185
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 228
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS- 511
D LT + + ++ VA + +L + +H++L NILL KI +FGLAR
Sbjct: 185 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 241
Query: 512 -AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ D +G L L +MAPE I + V T + DV++FGV++ E+ S
Sbjct: 242 YKDPDYVRKGDARLPLK--------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLV-YEFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 53 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 112
Query: 442 SDWLHSNRYQTSDNLTWKQRVQIAYDVANAL 472
S +L S R + T R + D A+
Sbjct: 113 STYLRSKRNEFVPYKTKGARFRQGKDYVGAI 143
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 161 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 200
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS- 511
D LT + + ++ VA + +L + +H++L NILL KI +FGLAR
Sbjct: 187 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243
Query: 512 -AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ D +G L L +MAPE I + V T + DV++FGV++ E+ S
Sbjct: 244 YKDPDYVRKGDARLPLK--------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLV-YEFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 55 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 114
Query: 442 SDWLHSNRYQTSDNLTWKQRVQIAYDVANAL 472
S +L S R + T R + D A+
Sbjct: 115 STYLRSKRNEFVPYKTKGARFRQGKDYVGAI 145
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL------ 183
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 184 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 229
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 263
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 161 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 200
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K I TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D K+ +FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARS- 511
D LT + + ++ VA + +L + +H++L NILL KI +FGLAR
Sbjct: 192 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 248
Query: 512 -AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 565
+ D +G L L +MAPE I + V T + DV++FGV++ E+ S
Sbjct: 249 YKDPDYVRKGDARLPLK--------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLV-YEFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 442 SDWLHSNRYQTSDNLTWKQRVQIAYDVANAL 472
S +L S R + T R + D A+
Sbjct: 120 STYLRSKRNEFVPYKTKGARFRQGKDYVGAI 150
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 435 FADNGALSDWLHSNRYQT--SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSN 492
F + +LSD + D LT + + ++ VA + +L + +H++L N
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 230
Query: 493 ILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPK 550
ILL KI +FGLAR + D +G L L +MAPE I + V T +
Sbjct: 231 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK--------WMAPETIFDRVYTIQ 282
Query: 551 LDVFAFGVVVLELLS 565
DV++FGV++ E+ S
Sbjct: 283 SDVWSFGVLLWEIFS 297
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 392 AAVKVMKGDVS--------SEINILKKINHS-NIIRLSGFCVHEGNTYLV-YEFADNGAL 441
AVK++K + SE+ IL I H N++ L G C G +V EF G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 442 SDWLHSNRYQTSDNLTWKQRVQIAYDVANAL 472
S +L S R + T R + D A+
Sbjct: 122 STYLRSKRNEFVPYKTKGARFRQGKDYVGAI 152
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 52/241 (21%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---GDVSS----EINILKKI 411
+Y+ Q+ + G+ + R+Q + + AVK+++ G + S E+ +L +
Sbjct: 13 VYQLQEDVLGEGAHA---RVQTCI--NLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQC 67
Query: 412 N-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
H N++ L F E YLV+E G++ +H R+ + L VQ DVA+
Sbjct: 68 QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQ---DVAS 122
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLR---AKITNFGLARSAESDEHEQGGYGLQLT 527
AL++LH N H++LK NIL + + KI +FGL G G++L
Sbjct: 123 ALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGL------------GSGIKLN 167
Query: 528 RHV-----------VGTYGYMAPEYI-----ENGVITPKLDVFAFGVVVLELLSGREAVT 571
G+ YMAPE + E + + D+++ GV++ LLSG
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
Query: 572 G 572
G
Sbjct: 228 G 228
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 408 LKKINHSNIIRLSGFCV-----HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
L+ H N++RL C E LV+E D L+ +L T K
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKD-- 124
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ + + L++LH + VH++LK NIL+ ++ + K+ +FGLAR Y
Sbjct: 125 -MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI----------Y 170
Query: 523 GLQLT-RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
Q+ VV T Y APE + +D+++ G + E+ + G + +
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD 226
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K I TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D K+ +FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLXGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 163
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 164 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 209
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 97/247 (39%), Gaps = 47/247 (19%)
Query: 344 LSHPQGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSS 403
L + F S V+ + L++ E+ I + RG+F G+ A VK+ D
Sbjct: 56 LEWAKPFTSKVKQMRLHR------------EDFEILKVIGRGAF-GEVAVVKLKNADKVF 102
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLV-----------YEFADNGALSDWLHSNRYQT 452
+ IL K + R C E LV Y F D+ L +L + Y
Sbjct: 103 AMKILNKWEM--LKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL--YLVMDYYVG 158
Query: 453 SDNLTWKQRVQIAYDVANALNYLHKYT-------NPPYVHKNLKTSNILLDTNLRAKITN 505
D LT + + A YL + YVH+++K NIL+D N ++ +
Sbjct: 159 GDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLAD 218
Query: 506 FGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE-----NGVITPKLDVFAFGVVV 560
FG D G + VGT Y++PE ++ G P+ D ++ GV +
Sbjct: 219 FGSCLKLMED-------GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCM 271
Query: 561 LELLSGR 567
E+L G
Sbjct: 272 YEMLYGE 278
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 464 IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYG 523
+ Y + L Y+H + +H++LK SN+ ++ + +I +FGLAR A+ E GY
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE---EMTGY- 188
Query: 524 LQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTG 572
V T Y APE + N + +D+++ G ++ ELL G+ G
Sbjct: 189 -------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 408 LKKINHSNIIRLSGFCV-----HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
L+ H N++RL C E LV+E D L+ +L T K
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKD-- 124
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
+ + + L++LH + VH++LK NIL+ ++ + K+ +FGLAR Y
Sbjct: 125 -MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI----------Y 170
Query: 523 GLQLT-RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
Q+ VV T Y APE + +D+++ G + E+ + G + +
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD 226
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 35/243 (14%)
Query: 406 NILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIA 465
+++ K++H +++ G C LV EF G+L +L N+ N+ WK +++A
Sbjct: 64 SMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNK--NCINILWK--LEVA 119
Query: 466 YDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQ 525
+A A+++L + T +H N+ NILL K N + ++ G
Sbjct: 120 KQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDP-----GISITV 171
Query: 526 LTRHVVGT-YGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYA 583
L + ++ ++ PE IEN + D ++FG + E+ SG GD
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG-----GD---------- 216
Query: 584 SISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTL 643
+ L + + KL+ + D R++ P A +A L NC ++ + RPS + L
Sbjct: 217 ---KPLSALDSQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
Query: 644 SKI 646
+ +
Sbjct: 271 NSL 273
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF ++ G+ Y VK+ + + + +E IL+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 161 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWTLC 200
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 183
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 184 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----------ATWTLCGTPEYLAPE 229
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 263
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 19/172 (11%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
D+ E +I + H +I+ L +G Y+V+EF D +D + +
Sbjct: 74 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG---ADLCFEIVKRADAGFVYS 130
Query: 460 QRVQIAY--DVANALNYLHKYTNPPYVHKNLKTSNILL---DTNLRAKITNFGLARSAES 514
+ V Y + AL Y H +H+++K +LL + + K+ FG+A
Sbjct: 131 EAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 187
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
GG VGT +MAPE ++ +DV+ GV++ LLSG
Sbjct: 188 SGLVAGGR--------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 435 FADNGALSDWLHSNRYQTSDN-------LTWKQRVQIAYDVANALNYLHKYTNPPYVHKN 487
FA +G D S+ + D+ +T + + ++ VA + +L ++ +H++
Sbjct: 168 FASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFL---SSRKCIHRD 224
Query: 488 LKTSNILLDTNLRAKITNFGLARS--AESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENG 545
L NILL N KI +FGLAR D +G L L +MAPE I +
Sbjct: 225 LAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK--------WMAPESIFDK 276
Query: 546 VITPKLDVFAFGVVVLELLS 565
+ + K DV+++GV++ E+ S
Sbjct: 277 IYSTKSDVWSYGVLLWEIFS 296
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query: 393 AVKVMKGDVSS--------EINILKKINHS-NIIRLSGFCVHEGNTYLV-YEFADNGALS 442
AVK++K ++ E+ IL I H N++ L G C +G +V E+ G LS
Sbjct: 61 AVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLS 120
Query: 443 DWLHSNR 449
++L S R
Sbjct: 121 NYLKSKR 127
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF +++ G+ + VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 30/227 (13%)
Query: 348 QGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVM---KGDVSSE 404
Q R++++ Y+ ++ I GS+S R F AVK++ K D + E
Sbjct: 12 QLHRNSIQFTDGYEVKE-DIGVGSYSVCKRCIHKATNMEF-----AVKIIDKSKRDPTEE 65
Query: 405 INILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQ 463
I IL + H NII L Y+V E G L D + ++ + ++
Sbjct: 66 IEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-----FSEREASA 120
Query: 464 IAYDVANALNYLHKYTNPPYVHKNLKTSNIL-LDTN---LRAKITNFGLARSAESDEHEQ 519
+ + + + YLH VH++LK SNIL +D + +I +FG A+ ++
Sbjct: 121 VLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--- 174
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
GL +T T ++APE +E D+++ GV++ +L+G
Sbjct: 175 ---GLLMTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 41/263 (15%)
Query: 362 FQDLK-IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-------KGDVS---SEINILKK 410
F+ LK I G+FSE +V + G A+K+M +G+VS E ++L
Sbjct: 63 FEILKVIGRGAFSEV-----AVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN 117
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
+ I +L E YLV E+ G L L + + R +A ++
Sbjct: 118 GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA---RFYLA-EIVM 173
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHV 530
A++ +H+ YVH+++K NILLD ++ +FG +D G +
Sbjct: 174 AIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD-------GTVRSLVA 223
Query: 531 VGTYGYMAPEYIE-------NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCE--AELL 581
VGT Y++PE ++ G P+ D +A GV E+ G+ D E +++
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283
Query: 582 Y--ASISRVLEESNVREKLRGFI 602
+ +S L + V E+ R FI
Sbjct: 284 HYKEHLSLPLVDEGVPEEARDFI 306
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF +++ G+ + VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 359 LYKFQDLK-IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKIN 412
L +F+ +K + TGSF +++ G+ + VK+ + + + +E IL+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 413 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANA 471
+++L N Y+V E+ G + L R+ + ++ + ++ ++
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
L+ ++++LK N+L+D ++T+FG A+ + T +
Sbjct: 160 LDL---------IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLC 199
Query: 532 GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
GT Y+APE I + +D +A GV++ E+ +G DQ
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 19/172 (11%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWK 459
D+ E +I + H +I+ L +G Y+V+EF D +D + +
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG---ADLCFEIVKRADAGFVYS 128
Query: 460 QRVQIAY--DVANALNYLHKYTNPPYVHKNLKTSNILL---DTNLRAKITNFGLARSAES 514
+ V Y + AL Y H +H+++K +LL + + K+ FG+A
Sbjct: 129 EAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 185
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
GG VGT +MAPE ++ +DV+ GV++ LLSG
Sbjct: 186 SGLVAGGR--------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E I + +N +++L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+A G + L R+ + ++ + ++ ++L+
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 163
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D K+ +FG A+ + T + GT Y+APE
Sbjct: 164 ---IYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----------TWXLCGTPEYLAPE 209
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+++D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ ++ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQ 242
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 17/171 (9%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL 456
++ + E+ +L + N I+ G +G + E D G+L L + + +
Sbjct: 66 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRI 120
Query: 457 TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDE 516
+ +++ V L YL + +H+++K SNIL+++ K+ +FG++
Sbjct: 121 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS------- 171
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 567
G + VGT YM+PE ++ + + D+++ G+ ++E+ GR
Sbjct: 172 ---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 404 EINILKKIN---HSNIIRLSGFCV-----HEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
E+ +L+++ H N++RL C E LV+E D L +L
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDK---APPPG 116
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515
L + + L++LH VH++LK NIL+ + K+ +FGLAR
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--- 170
Query: 516 EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQN 575
Y + LT VV T Y APE + +D+++ G + E+ + G N
Sbjct: 171 -----SYQMALT-PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG--N 222
Query: 576 CEAELL 581
EA+ L
Sbjct: 223 SEADQL 228
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADE 242
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 53/279 (18%)
Query: 380 GSVYRGSFK--GDDAAVKVMKGDVSSEIN---------ILKKINHSNIIRLSGFCVHEGN 428
G V++ F+ G AVK M+ + E N +LK + I++ G + +
Sbjct: 39 GQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD 98
Query: 429 TYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNL 488
++ E G ++ L R Q ++ +A + AL YL + +H+++
Sbjct: 99 VFIAMELM--GTCAEKL-KKRMQGPIPERILGKMTVA--IVKALYYLKEKHG--VIHRDV 151
Query: 489 KTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT 548
K SNILLD + K+ +FG++ D+ + G YMAPE I+ T
Sbjct: 152 KPSNILLDERGQIKLCDFGISGRLVDDKAKD---------RSAGCAAYMAPERIDPPDPT 202
Query: 549 P-----KLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGFID 603
+ DV++ G+ ++EL +G+ +NC+ + + +++VL+E +
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQFPY---KNCKTD--FEVLTKVLQE-----------E 246
Query: 604 PSLRNEYPLDLAFS--MAQLAKNCTAHDLNARPSISEVF 640
P L P + FS K+C D RP +++
Sbjct: 247 PPL---LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL 282
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 28/214 (13%)
Query: 359 LYKFQDL-KIATGS----FSEENRIQGSVY---RGSFKGDDAAVKVMKGDVSSEINILKK 410
+ K++ L KI G+ F +NR + R DD V EI +LK+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKE 57
Query: 411 INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
+ H NI+RL + LV+EF D L + S + +L + + +
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQD-LKKYFDS----CNGDLDPEIVKSFLFQLLK 112
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHV 530
L + H +H++LK N+L++ N K+ +FGLAR+ G ++
Sbjct: 113 GLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAF--------GIPVRCYSAE 161
Query: 531 VGTYGYMAPEYIENGVI-TPKLDVFAFGVVVLEL 563
V T Y P+ + + + +D+++ G + EL
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 82/216 (37%), Gaps = 42/216 (19%)
Query: 364 DLKIATGSFSEENRIQGSVYRG-----------SFKGDDAAVKVMKGDVSSEINILKKIN 412
D++I GSF +VY+G D K + E LK +
Sbjct: 31 DIEIGRGSFK-------TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ 83
Query: 413 HSNIIRL--SGFCVHEGNT--YLVYEFADNGALSDWLHSNRYQTSDNL-TWKQRVQIAYD 467
H NI+R S +G LV E +G L +L + L +W
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQ 137
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDT-NLRAKITNFGLARSAESDEHEQGGYGLQL 526
+ L +LH T PP +H++LK NI + KI + GLA +
Sbjct: 138 ILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----------F 186
Query: 527 TRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLE 562
+ V+GT + APE E +DV+AFG LE
Sbjct: 187 AKAVIGTPEFXAPEXYEEKY-DESVDVYAFGXCXLE 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 129/300 (43%), Gaps = 72/300 (24%)
Query: 361 KFQDL-KIATGSFSEENRIQGSVYRGSFK--GDDAAVK--VMKGDVSS-------EINIL 408
K++ L KI G+F G V++ + G A+K +M+ + EI IL
Sbjct: 19 KYEKLAKIGQGTF-------GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL 71
Query: 409 KKINHSNIIRLSGFCVHE--------GNTYLVYEFADN---GALSDWLHSNRYQTSDNLT 457
+ + H N++ L C + G+ YLV++F ++ G LS+ L T
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FT 123
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ ++ + N L Y+H+ +H+++K +N+L+ + K+ +FGLAR+ ++
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQ-- 574
Q + VV T Y PE + P +D++ G ++ E+ + + G+
Sbjct: 181 SQPN---RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 236
Query: 575 -------------------NCEAELLYASISRVL-EESNVREKLRGFIDPSLRNEYPLDL 614
N + LY + V ++ V+++L+ ++ R+ Y LDL
Sbjct: 237 HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV----RDPYALDL 292
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 129/300 (43%), Gaps = 72/300 (24%)
Query: 361 KFQDL-KIATGSFSEENRIQGSVYRGSFK--GDDAAVK--VMKGDVSS-------EINIL 408
K++ L KI G+F G V++ + G A+K +M+ + EI IL
Sbjct: 18 KYEKLAKIGQGTF-------GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL 70
Query: 409 KKINHSNIIRLSGFCVHE--------GNTYLVYEFADN---GALSDWLHSNRYQTSDNLT 457
+ + H N++ L C + G+ YLV++F ++ G LS+ L T
Sbjct: 71 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FT 122
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ ++ + N L Y+H+ +H+++K +N+L+ + K+ +FGLAR+ ++
Sbjct: 123 LSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 179
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQ-- 574
Q + VV T Y PE + P +D++ G ++ E+ + + G+
Sbjct: 180 SQPN---RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 235
Query: 575 -------------------NCEAELLYASISRVL-EESNVREKLRGFIDPSLRNEYPLDL 614
N + LY + V ++ V+++L+ ++ R+ Y LDL
Sbjct: 236 HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV----RDPYALDL 291
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT Y+AP
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEYLAPA 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL---RAKITNFGLARSAESDEHE 518
+++ + + YLH+ VH +LK NILL + KI +FG++R
Sbjct: 134 IRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI------ 184
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578
G+ +L R ++GT Y+APE + IT D++ G++ LL+ G+ N E
Sbjct: 185 --GHACEL-REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET 241
Query: 579 ELLYASISRV 588
Y +IS+V
Sbjct: 242 ---YLNISQV 248
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 36/223 (16%)
Query: 363 QDLK----IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSSEIN---------ILK 409
+DLK I G++ N++ V++ S G AVK ++ V + +++
Sbjct: 22 EDLKDLGEIGRGAYGSVNKM---VHKPS--GQIMAVKRIRSTVDEKEQKQLLMDLDVVMR 76
Query: 410 KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV-QIAYDV 468
+ I++ G EG+ ++ E D + Y D++ ++ + +I
Sbjct: 77 SSDCPYIVQFYGALFREGDCWICMELMSTSF--DKFYKYVYSVLDDVIPEEILGKITLAT 134
Query: 469 ANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTR 528
ALN+L + N +H+++K SNILLD + K+ +FG++ Q + TR
Sbjct: 135 VKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGIS--------GQLVDSIAKTR 184
Query: 529 HVVGTYGYMAPEYIENGV----ITPKLDVFAFGVVVLELLSGR 567
G YMAPE I+ + DV++ G+ + EL +GR
Sbjct: 185 D-AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 129/300 (43%), Gaps = 72/300 (24%)
Query: 361 KFQDL-KIATGSFSEENRIQGSVYRGSFK--GDDAAVK--VMKGDVSS-------EINIL 408
K++ L KI G+F G V++ + G A+K +M+ + EI IL
Sbjct: 19 KYEKLAKIGQGTF-------GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL 71
Query: 409 KKINHSNIIRLSGFCVHE--------GNTYLVYEFADN---GALSDWLHSNRYQTSDNLT 457
+ + H N++ L C + G+ YLV++F ++ G LS+ L T
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FT 123
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ ++ + N L Y+H+ +H+++K +N+L+ + K+ +FGLAR+ ++
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQ-- 574
Q + VV T Y PE + P +D++ G ++ E+ + + G+
Sbjct: 181 SQPN---RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 236
Query: 575 -------------------NCEAELLYASISRVL-EESNVREKLRGFIDPSLRNEYPLDL 614
N + LY + V ++ V+++L+ ++ R+ Y LDL
Sbjct: 237 HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV----RDPYALDL 292
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 50/207 (24%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTY--LVYEFADNGALSDWLH------------ 446
+ +E+ ++KK++H NI RL + V+E Y LV E G L D L+
Sbjct: 75 IKTEVRLMKKLHHPNIARL--YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAM 132
Query: 447 -------------------SNRYQTSDNLTWKQRVQ----IAYDVANALNYLHKYTNPPY 483
+ + ++L + QR + I + +AL+YLH N
Sbjct: 133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGI 189
Query: 484 VHKNLKTSNILLDTN--LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY 541
H+++K N L TN K+ +FGL S E + G Y T+ GT ++APE
Sbjct: 190 CHRDIKPENFLFSTNKSFEIKLVDFGL--SKEFYKLNNGEYYGMTTK--AGTPYFVAPEV 245
Query: 542 IE--NGVITPKLDVFAFGVVVLELLSG 566
+ N PK D ++ GV++ LL G
Sbjct: 246 LNTTNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 52/241 (21%)
Query: 359 LYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---GDVSS----EINILKKI 411
+Y+ Q+ + G+ + R+Q + + AVK+++ G + S E+ +L +
Sbjct: 13 VYQLQEDVLGEGAHA---RVQTCI--NLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQC 67
Query: 412 N-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVAN 470
H N++ L F E YLV+E G++ +H R+ + L VQ DVA+
Sbjct: 68 QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQ---DVAS 122
Query: 471 ALNYLHKYTNPPYVHKNLKTSNILLDTNLR---AKITNFGLARSAESDEHEQGGYGLQLT 527
AL++LH N H++LK NIL + + KI +F L G G++L
Sbjct: 123 ALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDL------------GSGIKLN 167
Query: 528 RHV-----------VGTYGYMAPEYI-----ENGVITPKLDVFAFGVVVLELLSGREAVT 571
G+ YMAPE + E + + D+++ GV++ LLSG
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
Query: 572 G 572
G
Sbjct: 228 G 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 404 EINILKKIN---HSNIIRLSGFCV-----HEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
E+ +L+++ H N++RL C E LV+E D L +L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDK---APPPG 108
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515
L + + L++LH VH++LK NIL+ + K+ +FGLAR
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---- 161
Query: 516 EHEQGGYGLQLTRH-VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
Y Q+ VV T Y APE + +D+++ G + E+ + G
Sbjct: 162 ------YSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG-- 213
Query: 575 NCEAELL 581
N EA+ L
Sbjct: 214 NSEADQL 220
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 404 EINILKKIN---HSNIIRLSGFCV-----HEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
E+ +L+++ H N++RL C E LV+E D L +L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDK---APPPG 108
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515
L + + L++LH VH++LK NIL+ + K+ +FGLAR
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---- 161
Query: 516 EHEQGGYGLQLTRH-VVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
Y Q+ VV T Y APE + +D+++ G + E+ + G
Sbjct: 162 ------YSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG-- 213
Query: 575 NCEAELL 581
N EA+ L
Sbjct: 214 NSEADQL 220
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 115/284 (40%), Gaps = 58/284 (20%)
Query: 380 GSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNIIRLSGFCVHEGNTY 430
G +++G ++G+D VKV+K D + E L+ +H N++ + G C +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 431 --LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKN- 487
L+ + G+L + LH D Q V+ A D A +LH T P + ++
Sbjct: 84 PTLITHWXPYGSLYNVLHEGTNFVVDQ---SQAVKFALDXARGXAFLH--TLEPLIPRHA 138
Query: 488 LKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI 547
L + ++ +D + A+I+ + S +S ++APE ++
Sbjct: 139 LNSRSVXIDEDXTARISXADVKFSFQSPGRXYAP-------------AWVAPEALQK--- 182
Query: 548 TPK------LDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVLEESNVREKLRGF 601
P+ D ++F V++ EL++ E+ +A +S E + L G
Sbjct: 183 KPEDTNRRSADXWSFAVLLWELVT------------REVPFADLSNX--EIGXKVALEG- 227
Query: 602 IDPSLRNEYPLDLAFSMAQLAKNCTAHDLNARPSISEVFVTLSK 645
LR P ++ +++L K C D RP + L K
Sbjct: 228 ----LRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEK 267
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 348 QGFRSAVESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVM---KGDVSSE 404
Q R++++ Y+ ++ I GS+S R F AVK++ K D + E
Sbjct: 12 QLHRNSIQFTDGYEVKE-DIGVGSYSVCKRCIHKATNXEF-----AVKIIDKSKRDPTEE 65
Query: 405 INILKKI-NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQ 463
I IL + H NII L Y+V E G L D + ++ + ++
Sbjct: 66 IEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF-----FSEREASA 120
Query: 464 IAYDVANALNYLHKYTNPPYVHKNLKTSNIL-LDTN---LRAKITNFGLARSAESDEHEQ 519
+ + + + YLH VH++LK SNIL +D + +I +FG A+ ++
Sbjct: 121 VLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--- 174
Query: 520 GGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
GL T T ++APE +E D+++ GV++ L+G
Sbjct: 175 ---GLLXTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 404 EINILKKIN---HSNIIRLSGFCV-----HEGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
E+ +L+++ H N++RL C E LV+E D L +L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDK---APPPG 108
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD 515
L + + L++LH VH++LK NIL+ + K+ +FGLAR
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---- 161
Query: 516 EHEQGGYGLQLT-RHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
Y Q+ VV T Y APE + +D+++ G + E+ + G
Sbjct: 162 ------YSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG-- 213
Query: 575 NCEAELL 581
N EA+ L
Sbjct: 214 NSEADQL 220
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 43/221 (19%)
Query: 374 EENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNII-RLSGFCVHEGNTYLV 432
E+ I + RG+F V V+K + I +K +N ++ R C E LV
Sbjct: 74 EDFEIIKVIGRGAF----GEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLV 129
Query: 433 -----------YEFADNGALSDWLHSNRYQTSDNLTWKQRVQ--IAYDVAN--------A 471
Y F D L +L + Y D LT + + + D+A A
Sbjct: 130 NGDCQWITALHYAFQDENHL--YLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLA 187
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
++ +H+ YVH+++K N+LLD N ++ +FG D G + V
Sbjct: 188 IDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD-------GTVQSSVAV 237
Query: 532 GTYGYMAPEYIEN-----GVITPKLDVFAFGVVVLELLSGR 567
GT Y++PE ++ G P+ D ++ GV + E+L G
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 43/221 (19%)
Query: 374 EENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNII-RLSGFCVHEGNTYLV 432
E+ I + RG+F V V+K + I +K +N ++ R C E LV
Sbjct: 90 EDFEIIKVIGRGAF----GEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLV 145
Query: 433 -----------YEFADNGALSDWLHSNRYQTSDNLTWKQRVQ--IAYDVAN--------A 471
Y F D L +L + Y D LT + + + D+A A
Sbjct: 146 NGDCQWITALHYAFQDENHL--YLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLA 203
Query: 472 LNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV 531
++ +H+ YVH+++K N+LLD N ++ +FG D G + V
Sbjct: 204 IDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD-------GTVQSSVAV 253
Query: 532 GTYGYMAPEYIEN-----GVITPKLDVFAFGVVVLELLSGR 567
GT Y++PE ++ G P+ D ++ GV + E+L G
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADN--GALSDWLHSNRYQTSDNLTWKQR 461
EI+ILK++ HSNI++L + LV+E D L D +++T K
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGL----ESVTAKS- 104
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
+ N + Y H + +H++LK N+L++ KI +FGLAR+
Sbjct: 105 --FLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARA---------- 149
Query: 522 YGLQLTR--HVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSG 566
+G+ + + H V T Y AP+ + + +D+++ G + E+++G
Sbjct: 150 FGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADN--GALSDWLHSNRYQTSDNLTWKQR 461
EI+ILK++ HSNI++L + LV+E D L D +++T K
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGL----ESVTAKS- 104
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
+ N + Y H + +H++LK N+L++ KI +FGLAR+
Sbjct: 105 --FLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARA---------- 149
Query: 522 YGLQLTR--HVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSG 566
+G+ + + H V T Y AP+ + + +D+++ G + E+++G
Sbjct: 150 FGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 23/183 (12%)
Query: 398 KGDVSSEINILKKINHSNIIRLSGFCVHE--GNTYLVYEFADNGA--LSDWLHSNRYQTS 453
+ +V EI +L+++ H N+I+L +E Y+V E+ G + D + R+
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVC 109
Query: 454 DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAE 513
Q + + L YLH VHK++K N+LL T KI+ G+A +
Sbjct: 110 ------QAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
Query: 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT---PKLDVFAFGVVVLELLSGREAV 570
+ R G+ + PE I NG+ T K+D+++ GV + + +G
Sbjct: 161 PFAAD------DTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
Query: 571 TGD 573
GD
Sbjct: 214 EGD 216
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 34/201 (16%)
Query: 382 VYRGSFKGDDAAVKVMKGDVSS----EINILKKIN-HSNIIRLSGFCVHEGN--TYLVYE 434
VYRG F D AVK + + S E+ +L++ + H N+IR FC + Y+ E
Sbjct: 41 VYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRY--FCTEKDRQFQYIAIE 98
Query: 435 FADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNIL 494
L +++ + + + + + L +LH VH++LK NIL
Sbjct: 99 LC-AATLQEYVEQKDFAH----LGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNIL 150
Query: 495 LDT-----NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI-----EN 544
+ ++A I++FGL + G + V GT G++APE + EN
Sbjct: 151 ISMPNAHGKIKAMISDFGLCKKLAV-----GRHSFSRRSGVPGTEGWIAPEMLSEDCKEN 205
Query: 545 GVITPKLDVFAFGVVVLELLS 565
T +D+F+ G V ++S
Sbjct: 206 PTYT--VDIFSAGCVFYYVIS 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 367 IATGSFSE----ENRIQGSVYRGSFKGDDAAVKVMKGDVS-SEINILKKINHSNIIRLSG 421
+ TGSF +++ G+ Y VK+ + + + +E IL+ +N +++L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 422 FCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
N Y+V E+ G + L R+ + ++ + ++ ++L+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL------ 162
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPE 540
++++LK N+L+D ++T+FG A+ + T + GT +APE
Sbjct: 163 ---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------TWXLCGTPEALAPE 208
Query: 541 YIENGVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
I + +D +A GV++ E+ +G DQ
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Query: 404 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADN--GALSDWLHSNRYQTSDNLTWKQR 461
EI+ILK++ HSNI++L + LV+E D L D +++T K
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGL----ESVTAKS- 104
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
+ N + Y H + +H++LK N+L++ KI +FGLAR+
Sbjct: 105 --FLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARA---------- 149
Query: 522 YGLQLTR--HVVGTYGYMAPEYIENG-VITPKLDVFAFGVVVLELLSG 566
+G+ + + H + T Y AP+ + + +D+++ G + E+++G
Sbjct: 150 FGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKI------NHSNIIRLS 420
I +G+F + R + AVK ++ + + N+ ++I H NI+R
Sbjct: 28 IGSGNFG-----VARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 421 GFCVHEGNTYLVYEFADNGALSDWL-HSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYT 479
+ + ++ E+A G L + + ++ R+ + + Q+ + + ++Y H
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQ------LLSGVSYCHSMQ 136
Query: 480 NPPYVHKNLKTSNILLDTN--LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYM 537
H++LK N LLD + R KI +FG ++S S H Q + VGT Y+
Sbjct: 137 ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVLHSQ-------PKSTVGTPAYI 184
Query: 538 APEYIENGVITPKL-DVFAFGVVVLELLSG 566
APE + K+ DV++ GV + +L G
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 397 MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL-HSNRYQTSDN 455
+ +V EI + + H NI+R + + +V E+A G L + + ++ R+ +
Sbjct: 58 IAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 456 LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN--LRAKITNFGLARSAE 513
+ Q+ + + ++Y H H++LK N LLD + R KI +FG ++S
Sbjct: 118 RFFFQQ------LISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKS-- 166
Query: 514 SDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL-DVFAFGVVVLELLSG 566
S H Q + VGT Y+APE + K+ DV++ GV + +L G
Sbjct: 167 SVLHSQ-------PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 128/300 (42%), Gaps = 72/300 (24%)
Query: 361 KFQDL-KIATGSFSEENRIQGSVYRGSFK--GDDAAVK--VMKGDVSS-------EINIL 408
K++ L KI G+F G V++ + G A+K +M+ + EI IL
Sbjct: 19 KYEKLAKIGQGTF-------GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL 71
Query: 409 KKINHSNIIRLSGFCVHEGN--------TYLVYEFADN---GALSDWLHSNRYQTSDNLT 457
+ + H N++ L C + + YLV++F ++ G LS+ L T
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK--------FT 123
Query: 458 WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH 517
+ ++ + N L Y+H+ +H+++K +N+L+ + K+ +FGLAR+ ++
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 518 EQGGYGLQLTRHVVGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQ-- 574
Q + VV T Y PE + P +D++ G ++ E+ + + G+
Sbjct: 181 SQPN---RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 236
Query: 575 -------------------NCEAELLYASISRVL-EESNVREKLRGFIDPSLRNEYPLDL 614
N + LY + V ++ V+++L+ ++ R+ Y LDL
Sbjct: 237 HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV----RDPYALDL 292
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 399 GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTW 458
G V+ EI IL ++ H+NII++ ++G LV E +G L + +R+ D
Sbjct: 74 GKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDE--- 129
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
I + +A+ YL +H+++K NI++ + K+ +FG A E
Sbjct: 130 PLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG--- 183
Query: 519 QGGYGLQLTRHVVGTYGYMAPEYIE-NGVITPKLDVFAFGVVVLELL 564
+L GT Y APE + N P+L++++ GV + L+
Sbjct: 184 ------KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL-HSNRYQTSDNLTW 458
+V EI + + H NI+R + + +V E+A G L + + ++ R+ + +
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN--LRAKITNFGLARSAESDE 516
Q++ A+A+ H++LK N LLD + R KI +FG +++ S
Sbjct: 121 FQQLISGVSYAHAMQ---------VAHRDLKLENTLLDGSPAPRLKIADFGYSKA--SVL 169
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL-DVFAFGVVVLELLSG 566
H Q + VGT Y+APE + K+ DV++ GV + +L G
Sbjct: 170 HSQ-------PKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 75/179 (41%), Gaps = 25/179 (13%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVH-----EGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V EI +L +H NI+ L VH YLV E L+ +H R S
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVIHDQRIVIS-- 132
Query: 456 LTWKQRVQ-IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514
Q +Q Y + L+ LH+ VH++L NILL N I +F LAR +
Sbjct: 133 ---PQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYI-ENGVITPKLDVFAFGVVVLELLSGREAVTG 572
D ++ H V Y APE + + T +D+++ G V+ E+ + + G
Sbjct: 187 DANKT---------HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 75/179 (41%), Gaps = 25/179 (13%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVH-----EGNTYLVYEFADNGALSDWLHSNRYQTSDN 455
V EI +L +H NI+ L VH YLV E L+ +H R S
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVIHDQRIVIS-- 132
Query: 456 LTWKQRVQ-IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES 514
Q +Q Y + L+ LH+ VH++L NILL N I +F LAR +
Sbjct: 133 ---PQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 515 DEHEQGGYGLQLTRHVVGTYGYMAPEYI-ENGVITPKLDVFAFGVVVLELLSGREAVTG 572
D ++ H V Y APE + + T +D+++ G V+ E+ + + G
Sbjct: 187 DANKT---------HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL-HSNRYQTSDNLTW 458
+V EI + + H NI+R + + +V E+A G L + + ++ R+ + +
Sbjct: 60 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFF 119
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN--LRAKITNFGLARSAESDE 516
Q+ + + ++Y H H++LK N LLD + R KI +FG ++S S
Sbjct: 120 FQQ------LISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVL 168
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL-DVFAFGVVVLELLSG 566
H Q + VGT Y+APE + K+ DV++ GV + +L G
Sbjct: 169 HSQ-------PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDV--SSEINILKKINHSNII 417
+ L++ GSF E +R++ G AVK ++ +V + E+ + I+
Sbjct: 94 WATHQLRLGRGSFGEVHRMEDKQ-----TGFQCAVKKVRLEVFRAEELMACAGLTSPRIV 148
Query: 418 RLSGFCVHEGNTYLVY-EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
L G V EG ++ E + G+L + D + Y + AL L
Sbjct: 149 PLYG-AVREGPWVNIFMELLEGGSLGQLVKEQGCLPED--------RALYYLGQALEGLE 199
Query: 477 KYTNPPYVHKNLKTSNILLDTN-LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYG 535
+ +H ++K N+LL ++ A + +FG A + D G L ++ GT
Sbjct: 200 YLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL---GKSLLTGDYIPGTET 256
Query: 536 YMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+MAPE + K+DV++ ++L +L+G
Sbjct: 257 HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 47/251 (18%)
Query: 403 SEINILKKIN-HSN-IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+EI L K+ HS+ IIRL + + + Y+V E N L+ WL + ++ D W++
Sbjct: 103 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWL--KKKKSID--PWER 157
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
+ +Y N L +H VH +LK +N L+ + K+ +FG+A + D
Sbjct: 158 K---SY-WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV- 211
Query: 521 GYGLQLTRHVVGTYGYMAPEYI-------ENGVITPKL----DVFAFGVVVLELLSGREA 569
+ VGT YM PE I ENG K+ DV++ G ++ + G+
Sbjct: 212 -----VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-- 264
Query: 570 VTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHD 629
+++ N KL IDP+ E+P + + K C D
Sbjct: 265 -------------TPFQQII---NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 308
Query: 630 LNARPSISEVF 640
R SI E+
Sbjct: 309 PKQRISIPELL 319
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 38/269 (14%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+++ K NH NI+ + + ++V F G+ D + ++ + L
Sbjct: 57 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY 116
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
+Q V AL+Y+H YVH+++K S+IL+ + K+ GL + H Q
Sbjct: 117 ILQ---GVLKALDYIHHMG---YVHRSVKASHILISVD--GKVYLSGLRSNLSMISHGQR 168
Query: 521 GYGLQ-LTRHVVGTYGYMAPEYIENGV--ITPKLDVFAFGVVVLELLSGR---------- 567
+ ++ V +++PE ++ + K D+++ G+ EL +G
Sbjct: 169 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 228
Query: 568 ---EAVTGDQNC-------EAELLYASISRVLEESNVREKLRGFIDPSLRN----EYPLD 613
E + G C AE L S SR + S + + L P N +P
Sbjct: 229 MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTST-PRPSNGDSPSHPYH 287
Query: 614 LAFS--MAQLAKNCTAHDLNARPSISEVF 640
FS + C + +ARPS S +
Sbjct: 288 RTFSPHFHHFVEQCLQRNPDARPSASTLL 316
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 47/251 (18%)
Query: 403 SEINILKKIN-HSN-IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+EI L K+ HS+ IIRL + + + Y+V E N L+ WL + + D W++
Sbjct: 75 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKK--SID--PWER 129
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
+ +Y N L +H VH +LK +N L+ + K+ +FG+A + D
Sbjct: 130 K---SY-WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXV- 183
Query: 521 GYGLQLTRHVVGTYGYMAPEYI-------ENGVITPKL----DVFAFGVVVLELLSGREA 569
+ VGT YM PE I ENG K+ DV++ G ++ + G+
Sbjct: 184 -----VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-- 236
Query: 570 VTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHD 629
+++ N KL IDP+ E+P + + K C D
Sbjct: 237 -------------TPFQQII---NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 280
Query: 630 LNARPSISEVF 640
R SI E+
Sbjct: 281 PKQRISIPELL 291
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 485 HKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIEN 544
H+++K NIL+ + A + +FG+A SA +DE L + VGT Y APE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA-SATTDEK------LTQLGNTVGTLYYXAPERFSE 209
Query: 545 GVITPKLDVFAFGVVVLELLSGREAVTGDQ 574
T + D++A V+ E L+G GDQ
Sbjct: 210 SHATYRADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 47/251 (18%)
Query: 403 SEINILKKIN-HSN-IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+EI L K+ HS+ IIRL + + + Y+V E N L+ WL + + D W++
Sbjct: 59 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKK--SID--PWER 113
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
+ +Y N L +H VH +LK +N L+ + K+ +FG+A + D
Sbjct: 114 K---SY-WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV- 167
Query: 521 GYGLQLTRHVVGTYGYMAPEYI-------ENGVITPKL----DVFAFGVVVLELLSGREA 569
+ VGT YM PE I ENG K+ DV++ G ++ + G+
Sbjct: 168 -----VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-- 220
Query: 570 VTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHD 629
+++ N KL IDP+ E+P + + K C D
Sbjct: 221 -------------TPFQQII---NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 264
Query: 630 LNARPSISEVF 640
R SI E+
Sbjct: 265 PKQRISIPELL 275
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 27/186 (14%)
Query: 404 EINILKKIN-HSNIIRLSGFCV--HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
EI IL +++ H NI+ L ++ + YLV+++ + LH+ ++ L
Sbjct: 58 EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD-----LHA--VIRANILEPVH 110
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
+ + Y + + YLH + +H+++K SNILL+ K+ +FGL+RS +
Sbjct: 111 KQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN 167
Query: 521 GYGLQLTRHV-------------VGTYGYMAPEYIENGV-ITPKLDVFAFGVVVLELLSG 566
L + + V T Y APE + T +D+++ G ++ E+L G
Sbjct: 168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
Query: 567 REAVTG 572
+ G
Sbjct: 228 KPIFPG 233
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 38/269 (14%)
Query: 401 VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+ E+++ K NH NI+ + + ++V F G+ D + ++ + L
Sbjct: 73 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY 132
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
+Q V AL+Y+H YVH+++K S+IL+ + K+ GL + H Q
Sbjct: 133 ILQ---GVLKALDYIHHMG---YVHRSVKASHILISVD--GKVYLSGLRSNLSMISHGQR 184
Query: 521 GYGLQ-LTRHVVGTYGYMAPEYIENGV--ITPKLDVFAFGVVVLELLSGR---------- 567
+ ++ V +++PE ++ + K D+++ G+ EL +G
Sbjct: 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 244
Query: 568 ---EAVTGDQNC-------EAELLYASISRVLEESNVREKLRGFIDPSLRN----EYPLD 613
E + G C AE L S SR + S + + L P N +P
Sbjct: 245 MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTST-PRPSNGDSPSHPYH 303
Query: 614 LAFS--MAQLAKNCTAHDLNARPSISEVF 640
FS + C + +ARPS S +
Sbjct: 304 RTFSPHFHHFVEQCLQRNPDARPSASTLL 332
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 47/251 (18%)
Query: 403 SEINILKKIN-HSN-IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+EI L K+ HS+ IIRL + + + Y+V E N L+ WL + + D W++
Sbjct: 75 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKK--SID--PWER 129
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
+ +Y N L +H VH +LK +N L+ + K+ +FG+A + D
Sbjct: 130 K---SY-WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV- 183
Query: 521 GYGLQLTRHVVGTYGYMAPEYI-------ENGVITPKL----DVFAFGVVVLELLSGREA 569
+ VGT YM PE I ENG K+ DV++ G ++ + G+
Sbjct: 184 -----VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-- 236
Query: 570 VTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHD 629
+++ N KL IDP+ E+P + + K C D
Sbjct: 237 -------------TPFQQII---NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 280
Query: 630 LNARPSISEVF 640
R SI E+
Sbjct: 281 PKQRISIPELL 291
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 32/222 (14%)
Query: 380 GSVYRGSFKGDD--AAVKVMKGDVSS--------EINILKKINHSNIIRLSGFCVHEGNT 429
+VY+G K D A+K ++ + E+++LK + H+NI+ L E +
Sbjct: 16 ATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSL 75
Query: 430 YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQI-AYDVANALNYLHKYTNPPYVHKNL 488
LV+E+ D L +L N+ V++ + + L Y H+ +H++L
Sbjct: 76 TLVFEYLDKD-LKQYL-----DDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDL 126
Query: 489 KTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGV-I 547
K N+L++ K+ +FGLAR+ + + V T Y P+ +
Sbjct: 127 KPQNLLINERGELKLADFGLARAK--------SIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 548 TPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLYASISRVL 589
+ ++D++ G + E+ +GR G E +L + I R+L
Sbjct: 179 STQIDMWGVGCIFYEMATGRPLFPG-STVEEQLHF--IFRIL 217
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 47/251 (18%)
Query: 403 SEINILKKIN-HSN-IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+EI L K+ HS+ IIRL + + + Y+V E N L+ WL + + D W++
Sbjct: 55 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKK--SID--PWER 109
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
+ +Y N L +H VH +LK +N L+ + K+ +FG+A + D
Sbjct: 110 K---SY-WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV- 163
Query: 521 GYGLQLTRHVVGTYGYMAPEYI-------ENGVITPKL----DVFAFGVVVLELLSGREA 569
+ VGT YM PE I ENG K+ DV++ G ++ + G+
Sbjct: 164 -----VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-- 216
Query: 570 VTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHD 629
+++ N KL IDP+ E+P + + K C D
Sbjct: 217 -------------TPFQQII---NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 260
Query: 630 LNARPSISEVF 640
R SI E+
Sbjct: 261 PKQRISIPELL 271
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 360 YKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDV--SSEINILKKINHSNII 417
+ L++ GSF E +R++ G AVK ++ +V + E+ + I+
Sbjct: 75 WATHQLRLGRGSFGEVHRMEDKQ-----TGFQCAVKKVRLEVFRAEELMACAGLTSPRIV 129
Query: 418 RLSGFCVHEGNTYLVY-EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLH 476
L G V EG ++ E + G+L + D + Y + AL L
Sbjct: 130 PLYG-AVREGPWVNIFMELLEGGSLGQLVKEQGCLPED--------RALYYLGQALEGLE 180
Query: 477 KYTNPPYVHKNLKTSNILLDTN-LRAKITNFGLARSAESDEHEQGGYGLQLTR--HVVGT 533
+ +H ++K N+LL ++ A + +FG A + D G G L ++ GT
Sbjct: 181 YLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD-----GLGKDLLTGDYIPGT 235
Query: 534 YGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
+MAPE + K+DV++ ++L +L+G
Sbjct: 236 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL-HSNRYQTSDNLTW 458
+V EI + + H NI+R + + +V E+A G L + + ++ R+ + +
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN--LRAKITNFGLARSAESDE 516
Q+ + + ++Y H H++LK N LLD + R KI FG ++S S
Sbjct: 121 FQQ------LISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKS--SVL 169
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL-DVFAFGVVVLELLSG 566
H Q + VGT Y+APE + K+ DV++ GV + +L G
Sbjct: 170 HSQ-------PKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 400 DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL-HSNRYQTSDNLTW 458
+V EI + + H NI+R + + +V E+A G L + + ++ R+ + +
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTN--LRAKITNFGLARSAESDE 516
Q+ + + ++Y H H++LK N LLD + R KI FG ++S S
Sbjct: 121 FQQ------LISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKS--SVL 169
Query: 517 HEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL-DVFAFGVVVLELLSG 566
H Q + VGT Y+APE + K+ DV++ GV + +L G
Sbjct: 170 HSQ-------PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 104/250 (41%), Gaps = 47/250 (18%)
Query: 404 EINILKKIN-HSN-IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQR 461
EI L K+ HS+ IIRL + + + Y+V E N L+ WL + ++ D W+++
Sbjct: 104 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWL--KKKKSID--PWERK 158
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
+Y N L +H VH +LK +N L+ + K+ +FG+A + D
Sbjct: 159 ---SY-WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV-- 211
Query: 522 YGLQLTRHVVGTYGYMAPEYI-------ENGVITPKL----DVFAFGVVVLELLSGREAV 570
+ VGT YM PE I ENG K+ DV++ G ++ + G+
Sbjct: 212 ----VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--- 264
Query: 571 TGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDL 630
+++ N KL IDP+ E+P + + K C D
Sbjct: 265 ------------TPFQQII---NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309
Query: 631 NARPSISEVF 640
R SI E+
Sbjct: 310 KQRISIPELL 319
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 93/224 (41%), Gaps = 35/224 (15%)
Query: 367 IATGSFSEENRIQGSVYRGSF-KGDDAAVKVMKGDV---SSEINILKKINHSNIIRLSGF 422
I GSF G V++ + D+ A+K + D + E+ I++ + H N++ L F
Sbjct: 48 IGNGSF-------GVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 423 CVHEGNTY------LVYEFADNGALSDWLHSNRY-QTSDNLTWKQRVQIAYDVANALNYL 475
G+ LV E+ H + QT L K + Y + +L Y+
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM---YQLLRSLAYI 157
Query: 476 HKYTNPPYVHKNLKTSNILLDT-NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTY 534
H H+++K N+LLD + K+ +FG A+ + E + Y
Sbjct: 158 HSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--------VSXICSRY 206
Query: 535 GYMAPEYIENGV-ITPKLDVFAFGVVVLELLSGREAVTGDQNCE 577
Y APE I T +D+++ G V+ EL+ G+ G+ +
Sbjct: 207 -YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID 249
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 47/251 (18%)
Query: 403 SEINILKKIN-HSN-IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
+EI L K+ HS+ IIRL + + + Y+V E N L+ WL + ++ D W++
Sbjct: 56 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWL--KKKKSID--PWER 110
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
+ +Y N L +H VH +LK +N L+ + K+ +FG+A + D
Sbjct: 111 K---SY-WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV- 164
Query: 521 GYGLQLTRHVVGTYGYMAPEYI-------ENGVITPKL----DVFAFGVVVLELLSGREA 569
+ VGT YM PE I ENG K+ DV++ G ++ + G+
Sbjct: 165 -----VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-- 217
Query: 570 VTGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHD 629
+++ N KL IDP+ E+P + + K C D
Sbjct: 218 -------------TPFQQII---NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 261
Query: 630 LNARPSISEVF 640
R SI E+
Sbjct: 262 PKQRISIPELL 272
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 30/197 (15%)
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYL--VYEFADNGALSDWLHSNRYQTSDNLTWKQ 460
E +I+ N +++L FC + + YL V E+ G L + L SN Y + W +
Sbjct: 124 EERDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVN-LMSN-YDVPEK--WAK 177
Query: 461 RVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQG 520
+V AL+ +H +H+++K N+LLD + K+ +FG +
Sbjct: 178 FYTA--EVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE------ 226
Query: 521 GYGLQLTRHVVGTYGYMAPEYIE----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNC 576
G+ VGT Y++PE ++ +G + D ++ GV + E+L GD
Sbjct: 227 -TGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML------VGDTPF 279
Query: 577 EAELLYASISRVLEESN 593
A+ L + S++++ N
Sbjct: 280 YADSLVGTYSKIMDHKN 296
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 394 VKVMKGD---VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRY 450
VKV D V EI+IL H NI+ L +++EF + + ++++ +
Sbjct: 38 VKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF 97
Query: 451 QTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA--KITNFGL 508
+ L ++ V + V AL +LH + H +++ NI+ T + KI FG
Sbjct: 98 E----LNEREIVSYVHQVCEALQFLHSHNIG---HFDIRPENIIYQTRRSSTIKIIEFGQ 150
Query: 509 ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 566
AR + ++ R + Y APE ++ V++ D+++ G +V LLSG
Sbjct: 151 ARQLKPGDN---------FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 28/180 (15%)
Query: 401 VSSEINILKKIN-HSNIIRLSGFCV------HEGNT----YLVYEFADNGALSDWLHSNR 449
+ E+ +KK++ H NI++ FC E +T +L+ G L ++L +
Sbjct: 72 IIQEVCFMKKLSGHPNIVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL--KK 126
Query: 450 YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLA 509
++ L+ ++I Y A+ ++H+ PP +H++LK N+LL K+ +FG A
Sbjct: 127 MESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
Query: 510 RSAES------DEHEQGGYGLQLTRHVVGTYGYMAPEYIE---NGVITPKLDVFAFGVVV 560
+ + ++TR+ T Y PE I+ N I K D++A G ++
Sbjct: 186 TTISHYPDYSWSAQRRALVEEEITRNT--TPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 389 GDDAAVKVMKGDVSSE--------INI-LKKINHSNIIRLSGFCVHEGNTYLVYEFADNG 439
G AVK ++ V+S+ ++I ++ ++ + G EG+ ++ E D
Sbjct: 76 GQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTS 135
Query: 440 ALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNL 499
D + + +IA + AL +LH + +H+++K SN+L++
Sbjct: 136 L--DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALG 191
Query: 500 RAKITNFGLARSAESDEHEQGGYGLQLTRHVV--GTYGYMAPEYIENGV----ITPKLDV 553
+ K+ +FG++ GY + + G YMAPE I + + K D+
Sbjct: 192 QVKMCDFGIS-----------GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDI 240
Query: 554 FAFGVVVLEL 563
++ G+ ++EL
Sbjct: 241 WSLGITMIEL 250
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDV--SSEINILKKINHSNIIRLSGFC 423
++ GSF E +R+ + G AVK ++ +V E+ ++ I+ L G
Sbjct: 81 RVGRGSFGEVHRM-----KDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYG-A 134
Query: 424 VHEGNTYLVY-EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPP 482
V EG ++ E + G+L + D + Y + AL L
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGCLPED--------RALYYLGQALEGLEYLHTRR 186
Query: 483 YVHKNLKTSNILLDTN-LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY 541
+H ++K N+LL ++ RA + +FG A + D G L ++ GT +MAPE
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL---GKSLLTGDYIPGTETHMAPEV 243
Query: 542 IENGVITPKLDVFAFGVVVLELLSG 566
+ K+D+++ ++L +L+G
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDV--SSEINILKKINHSNIIRLSGFC 423
++ GSF E +R+ + G AVK ++ +V E+ ++ I+ L G
Sbjct: 65 RVGRGSFGEVHRM-----KDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYG-A 118
Query: 424 VHEGNTYLVY-EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPP 482
V EG ++ E + G+L + D + Y + AL L
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCLPED--------RALYYLGQALEGLEYLHTRR 170
Query: 483 YVHKNLKTSNILLDTN-LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY 541
+H ++K N+LL ++ RA + +FG A + D G L ++ GT +MAPE
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL---GKSLLTGDYIPGTETHMAPEV 227
Query: 542 IENGVITPKLDVFAFGVVVLELLSG 566
+ K+D+++ ++L +L+G
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 366 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDV--SSEINILKKINHSNIIRLSGFC 423
++ GSF E +R+ + G AVK ++ +V E+ ++ I+ L G
Sbjct: 79 RLGRGSFGEVHRM-----KDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYG-A 132
Query: 424 VHEGNTYLVY-EFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPP 482
V EG ++ E + G+L + D + Y + AL L
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMGCLPED--------RALYYLGQALEGLEYLHTRR 184
Query: 483 YVHKNLKTSNILLDTN-LRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY 541
+H ++K N+LL ++ RA + +FG A + D G L ++ GT +MAPE
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL---GKSLLTGDYIPGTETHMAPEV 241
Query: 542 IENGVITPKLDVFAFGVVVLELLSG 566
+ K+D+++ ++L +L+G
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 103/250 (41%), Gaps = 47/250 (18%)
Query: 404 EINILKKIN-HSN-IIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQR 461
EI L K+ HS+ IIRL + + + Y+V E N L+ WL + ++ D W+++
Sbjct: 104 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWL--KKKKSID--PWERK 158
Query: 462 VQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG 521
+Y N L +H VH +LK +N L+ + K+ +FG+A + D
Sbjct: 159 ---SY-WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV-- 211
Query: 522 YGLQLTRHVVGTYGYMAPEYI-------ENGVITPKL----DVFAFGVVVLELLSGREAV 570
+ VG YM PE I ENG K+ DV++ G ++ + G+
Sbjct: 212 ----VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--- 264
Query: 571 TGDQNCEAELLYASISRVLEESNVREKLRGFIDPSLRNEYPLDLAFSMAQLAKNCTAHDL 630
+++ N KL IDP+ E+P + + K C D
Sbjct: 265 ------------TPFQQII---NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309
Query: 631 NARPSISEVF 640
R SI E+
Sbjct: 310 KQRISIPELL 319
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 99/255 (38%), Gaps = 48/255 (18%)
Query: 339 QASNSLSHPQGFRSAVESLTLYKFQDL-KIATGSFSEENRIQ----GSVY-----RGSFK 388
+AS +L P S ES FQ L ++ GS+ E +++ G +Y F+
Sbjct: 36 EASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR 95
Query: 389 G-DDAAVKVMKGDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLH 446
G D A K+ +E+ +K+ H +RL G YL E S H
Sbjct: 96 GPKDRARKL------AEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGP---SLQQH 146
Query: 447 SNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNF 506
+ S L Q D AL +LH VH ++K +NI L R K+ +F
Sbjct: 147 CEAWGAS--LPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDF 201
Query: 507 GL------ARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVV 560
GL A + E E G YMAPE ++ T DVF+ G+ +
Sbjct: 202 GLLVELGTAGAGEVQE---------------GDPRYMAPELLQGSYGTAA-DVFSLGLTI 245
Query: 561 LELLSGREAVTGDQN 575
LE+ E G +
Sbjct: 246 LEVACNMELPHGGEG 260
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 353 AVESLTLYKFQDL-KIATGSFSEENRIQGSVYR------GSFKGDDAAVKVMKGDVSSEI 405
A++S +F +L KI +G F GSV++ G + K + G V E
Sbjct: 2 AMKSRYTTEFHELEKIGSGEF-------GSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQ 53
Query: 406 NILKKI-------NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTW 458
N L+++ HS+++R + + + E+ + G+L+D + N Y+
Sbjct: 54 NALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKE 112
Query: 459 KQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHE 518
+ + V L Y+H + VH ++K SNI + R I N A S E DE +
Sbjct: 113 AELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFIS---RTSIPN---AASEEGDEDD 163
Query: 519 QGG----YGLQLTRHVV---------GTYGYMAPEYI-ENGVITPKLDVFAFGVVVL 561
+ + HV G ++A E + EN PK D+FA + V+
Sbjct: 164 WASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 46/229 (20%)
Query: 361 KFQDL-KIATGSFSEENRIQGSVYR------GSFKGDDAAVKVMKGDVSSEINILKKI-- 411
+F +L KI +G F GSV++ G + K + G V E N L+++
Sbjct: 10 EFHELEKIGSGEF-------GSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYA 61
Query: 412 -----NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
HS+++R + + + E+ + G+L+D + N Y+ + +
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLL 120
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG----Y 522
V L Y+H + VH ++K SNI + R I N A S E DE + +
Sbjct: 121 QVGRGLRYIHSMS---LVHMDIKPSNIFIS---RTSIPN---AASEEGDEDDWASNKVMF 171
Query: 523 GLQLTRHVV---------GTYGYMAPEYI-ENGVITPKLDVFAFGVVVL 561
+ HV G ++A E + EN PK D+FA + V+
Sbjct: 172 KIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 41/253 (16%)
Query: 360 YKFQDLK-IATGSFSE-----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILK---- 409
Y+++ LK I GSF + ++++ V + + K + EI IL+
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRK 152
Query: 410 --KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
K N N+I + + + +E L + + N++Q + + A+
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMN-LYELIKKNKFQ---GFSLPLVRKFAHS 208
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA--KITNFGLARSAESDEHEQGGYGLQ 525
+ L+ LHK +H +LK NILL R+ K+ +FG + EH++ +Q
Sbjct: 209 ILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRVYTXIQ 261
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQN-----CEAEL 580
+ Y APE I +D+++ G ++ ELL+G + G+ C EL
Sbjct: 262 -------SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 581 LYASISRVLEESN 593
L ++L+ S
Sbjct: 315 LGMPSQKLLDASK 327
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 49/244 (20%)
Query: 361 KFQDL-KIATGSFSEENRIQGSVYR------GSFKGDDAAVKVMKGDVSSEINILKKI-- 411
+F +L KI +G F GSV++ G + K + G V E N L+++
Sbjct: 8 EFHELEKIGSGEF-------GSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYA 59
Query: 412 -----NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
HS+++R + + + E+ + G+L+D + N Y+ + +
Sbjct: 60 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLL 118
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG----Y 522
V L Y+H + VH ++K SNI + R I N A S E DE + +
Sbjct: 119 QVGRGLRYIHSMS---LVHMDIKPSNIFIS---RTSIPN---AASEEGDEDDWASNKVMF 169
Query: 523 GLQLTRHVV---------GTYGYMAPEYI-ENGVITPKLDVFAFGVVVLELLSGREAV-- 570
+ HV G ++A E + EN PK D+FA + V+ +G E +
Sbjct: 170 KIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-XAAGAEPLPR 228
Query: 571 TGDQ 574
GDQ
Sbjct: 229 NGDQ 232
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 21/138 (15%)
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA--KITNFGLARSAESDEHEQG 520
+ A+ + L+ LHK +H +LK NILL R+ K+ +FG + EH
Sbjct: 204 KFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEH--- 253
Query: 521 GYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQN----- 575
Q + + Y APE I +D+++ G ++ ELL+G + G+
Sbjct: 254 ----QRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA 309
Query: 576 CEAELLYASISRVLEESN 593
C ELL ++L+ S
Sbjct: 310 CMIELLGMPXQKLLDASK 327
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 421 GFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTN 480
G EG+ ++ E D D + + +IA + AL +LH +
Sbjct: 73 GALFREGDVWICMELMDTSL--DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 130
Query: 481 PPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHV-VGTYGYMAP 539
+H+++K SN+L++ + K+ +FG++ D + + + G YMAP
Sbjct: 131 --VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD----------VAKDIDAGCKPYMAP 178
Query: 540 EYIENGV----ITPKLDVFAFGVVVLEL 563
E I + + K D+++ G+ ++EL
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 46/229 (20%)
Query: 361 KFQDL-KIATGSFSEENRIQGSVYR------GSFKGDDAAVKVMKGDVSSEINILKKI-- 411
+F +L KI +G F GSV++ G + K + G V E N L+++
Sbjct: 12 EFHELEKIGSGEF-------GSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYA 63
Query: 412 -----NHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAY 466
HS+++R + + + E+ + G+L+D + N Y+ + +
Sbjct: 64 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLL 122
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGG----Y 522
V L Y+H + VH ++K SNI + R I N A S E DE + +
Sbjct: 123 QVGRGLRYIHSMS---LVHMDIKPSNIFIS---RTSIPN---AASEEGDEDDWASNKVMF 173
Query: 523 GLQLTRHVV---------GTYGYMAPEYI-ENGVITPKLDVFAFGVVVL 561
+ HV G ++A E + EN PK D+FA + V+
Sbjct: 174 KIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 25/144 (17%)
Query: 446 HSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA-KIT 504
H + ++L++++ + ++ AL +H++ VH+++K SN L + L+ +
Sbjct: 104 HESFLDILNSLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALV 160
Query: 505 NFGLAR---------------SAESDEHEQGGYGLQLTRHV-----VGTYGYMAPEYIEN 544
+FGLA+ A+ + Q + L+R GT G+ APE +
Sbjct: 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK 220
Query: 545 GV-ITPKLDVFAFGVVVLELLSGR 567
T +D+++ GV+ L LLSGR
Sbjct: 221 CPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 41/253 (16%)
Query: 360 YKFQDLK-IATGSFSE-----ENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILK---- 409
Y+++ LK I GSF + ++++ V + + K + EI IL+
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRK 152
Query: 410 --KINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYD 467
K N N+I + + + +E L + + N++Q + + A+
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMN-LYELIKKNKFQ---GFSLPLVRKFAHS 208
Query: 468 VANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA--KITNFGLARSAESDEHEQGGYGLQ 525
+ L+ LHK +H +LK NILL R+ K+ +FG + EH++ +Q
Sbjct: 209 ILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRVYTXIQ 261
Query: 526 LTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGREAVTGDQN-----CEAEL 580
+ Y APE I +D+++ G ++ ELL+G + G+ C EL
Sbjct: 262 -------SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 581 LYASISRVLEESN 593
L ++L+ S
Sbjct: 315 LGMPSQKLLDASK 327
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 26/195 (13%)
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
E +I+ N +++L + Y+V E+ G L + L SN Y + W R
Sbjct: 118 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSN-YDVPEK--W-ARF 172
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
A +V AL+ +H ++H+++K N+LLD + K+ +FG +
Sbjct: 173 YTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE------- 221
Query: 523 GLQLTRHVVGTYGYMAPEYIE----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578
G+ VGT Y++PE ++ +G + D ++ GV + E+L GD A
Sbjct: 222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML------VGDTPFYA 275
Query: 579 ELLYASISRVLEESN 593
+ L + S+++ N
Sbjct: 276 DSLVGTYSKIMNHKN 290
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 467 DVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQL 526
+V AL+ +H ++H+++K N+LLD + K+ +FG + G+
Sbjct: 181 EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE-------GMVR 230
Query: 527 TRHVVGTYGYMAPEYIE----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEAELLY 582
VGT Y++PE ++ +G + D ++ GV + E+L GD A+ L
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML------VGDTPFYADSLV 284
Query: 583 ASISRVLEESN 593
+ S+++ N
Sbjct: 285 GTYSKIMNHKN 295
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 26/195 (13%)
Query: 403 SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRV 462
E +I+ N +++L + Y+V E+ G L + L SN Y + W R
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSN-YDVPEK--W-ARF 177
Query: 463 QIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGY 522
A +V AL+ +H ++H+++K N+LLD + K+ +FG +
Sbjct: 178 YTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE------- 226
Query: 523 GLQLTRHVVGTYGYMAPEYIE----NGVITPKLDVFAFGVVVLELLSGREAVTGDQNCEA 578
G+ VGT Y++PE ++ +G + D ++ GV + E+L GD A
Sbjct: 227 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML------VGDTPFYA 280
Query: 579 ELLYASISRVLEESN 593
+ L + S+++ N
Sbjct: 281 DSLVGTYSKIMNHKN 295
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 424 VHEGNTYL--VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNP 481
+H G L + E + G L + Q T ++ +I D+ A+ +LH +
Sbjct: 94 MHHGKRCLLIIMECMEGGELFSRIQERGDQA---FTEREAAEIMRDIGTAIQFLHSHN-- 148
Query: 482 PYVHKNLKTSNILLDTNLR---AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMA 538
H+++K N+L + + K+T+FG A+ + + Y T Y+A
Sbjct: 149 -IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----------TPYYVA 197
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLSG 566
PE + D+++ GV++ LL G
Sbjct: 198 PEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 424 VHEGNTYL--VYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNP 481
+H G L + E + G L + Q T ++ +I D+ A+ +LH +
Sbjct: 75 MHHGKRCLLIIMECMEGGELFSRIQERGDQA---FTEREAAEIMRDIGTAIQFLHSHN-- 129
Query: 482 PYVHKNLKTSNILLDTNLR---AKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMA 538
H+++K N+L + + K+T+FG A+ + + Y T Y+A
Sbjct: 130 -IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----------TPYYVA 178
Query: 539 PEYIENGVITPKLDVFAFGVVVLELLSG 566
PE + D+++ GV++ LL G
Sbjct: 179 PEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 18/139 (12%)
Query: 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+V E D G L + Q T ++ +I + A+ YLH H+++K
Sbjct: 90 IVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVKP 143
Query: 491 SNILLDT---NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI 547
N+L + N K+T+FG A+ S LT Y Y+APE +
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAKETTSHN--------SLTEPCYTPY-YVAPEVLGPEKY 194
Query: 548 TPKLDVFAFGVVVLELLSG 566
D+++ GV++ LL G
Sbjct: 195 DKSCDMWSLGVIMYILLCG 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 18/139 (12%)
Query: 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+V E D G L + Q T ++ +I + A+ YLH H+++K
Sbjct: 106 IVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVKP 159
Query: 491 SNILLDT---NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI 547
N+L + N K+T+FG A+ S LT Y Y+APE +
Sbjct: 160 ENLLYTSKRPNAILKLTDFGFAKETTSHN--------SLTTPCYTPY-YVAPEVLGPEKY 210
Query: 548 TPKLDVFAFGVVVLELLSG 566
D+++ GV++ LL G
Sbjct: 211 DKSCDMWSLGVIMYILLCG 229
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 18/139 (12%)
Query: 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+V E D G L + Q T ++ +I + A+ YLH H+++K
Sbjct: 98 IVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVKP 151
Query: 491 SNILLDT---NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI 547
N+L + N K+T+FG A+ S LT Y Y+APE +
Sbjct: 152 ENLLYTSKRPNAILKLTDFGFAKETTSHN--------SLTTPCYTPY-YVAPEVLGPEKY 202
Query: 548 TPKLDVFAFGVVVLELLSG 566
D+++ GV++ LL G
Sbjct: 203 DKSCDMWSLGVIMYILLCG 221
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 18/139 (12%)
Query: 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+V E D G L + Q T ++ +I + A+ YLH H+++K
Sbjct: 96 IVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVKP 149
Query: 491 SNILLDT---NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI 547
N+L + N K+T+FG A+ S LT Y Y+APE +
Sbjct: 150 ENLLYTSKRPNAILKLTDFGFAKETTSHN--------SLTTPCYTPY-YVAPEVLGPEKY 200
Query: 548 TPKLDVFAFGVVVLELLSG 566
D+++ GV++ LL G
Sbjct: 201 DKSCDMWSLGVIMYILLCG 219
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 18/139 (12%)
Query: 431 LVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKT 490
+V E D G L + Q T ++ +I + A+ YLH H+++K
Sbjct: 97 IVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVKP 150
Query: 491 SNILLDT---NLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVI 547
N+L + N K+T+FG A+ S LT Y Y+APE +
Sbjct: 151 ENLLYTSKRPNAILKLTDFGFAKETTSHN--------SLTTPCYTPY-YVAPEVLGPEKY 201
Query: 548 TPKLDVFAFGVVVLELLSG 566
D+++ GV++ LL G
Sbjct: 202 DKSCDMWSLGVIMYILLCG 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,962,334
Number of Sequences: 62578
Number of extensions: 735065
Number of successful extensions: 3947
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 1561
Number of HSP's gapped (non-prelim): 1065
length of query: 669
length of database: 14,973,337
effective HSP length: 105
effective length of query: 564
effective length of database: 8,402,647
effective search space: 4739092908
effective search space used: 4739092908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)